HHsearch results for GI: 254780788 and protein with PDBid: 3go5_A
>3go5_A Multidomain protein with S1 RNA-binding domains; joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.40A {Streptococcus pneumoniae TIGR4}
Probab=97.50 E-value=0.00057 Score=46.81 Aligned_cols=61 Identities=18% Similarity=0.259 Sum_probs=38.2
Q ss_pred HCCCEEEEEEEECCCCEEEEEECCCEEEEEHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCH
Q ss_conf 208389999984057638999579358744787488751152766999997611358702898715988
Q gi|254780788|r 137 KVGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETISRENLRPGDRVKSYIYDVRREQRGPQVLLSRTHP 205 (526)
Q Consensus 137 r~Geiv~G~V~r~e~~~iiVdlg~~ea~Lp~~e~ip~E~~~~Gdrika~i~~V~~~~rgpqi~lSRt~p 205 (526)
.+|.+|+|+|.+.....++|+.++.++.||++|. .+++||.|.+||+. ..+. .+++|...|
T Consensus 5 ~~g~iv~g~V~~~~d~g~~v~~~g~~~~l~k~e~----~~~iGd~i~Vfvy~-D~e~---r~~aT~~~p 65 (285)
T 3go5_A 5 NLASFIVGLIIDENDRFYFVQKDGQTYALAKEEG----QHTVGDTVKGFAYT-DMKQ---KLRLTTLEV 65 (285)
T ss_dssp TTTEEEEEEEEEECSSEEEEEETTEEEEEEGGGC----CCCTTSEEEEEEEE-CTTS---CEEEECSCC
T ss_pred CCCCEEEEEEEEEECCEEEEECCCEEEEECCCCC----CCCCCCEEEEEEEE-CCCC---CEEEECCCC
T ss_conf 6775899999998278799953998997052016----67899999999999-8889---898413677