RPSBLAST alignment of GI: 254780788 and protein with PDBid: 1k0r
>1k0r_A NUSA; two component arrangement, S1 domain, two K-homology domains., structural genomics, PSI, protein structure initiative; 1.70A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1 Length = 366
Score = 379 bits (975), Expect = e-106
Identities = 132/373 (35%), Positives = 203/373 (54%), Gaps = 32/373 (8%)
Query: 1 MVSANRLEL-LQIADAVAYEKSIDRDVVLSVMADSIQKAARSLYGTMSDIRVEINPETGD 59
+VS + + + A+ ++ I + +L + ++ A R G +D R+EI+ +TG
Sbjct: 14 LVSRRHMNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGV 73
Query: 60 ISLFRLLEVVEEVENYTCQISLKVARDRDPSIDIGGVVSDPLPPMDFGRVAVQSAKQVII 119
+ + AR+ D + ++ D P FGR+A +A+QV++
Sbjct: 74 VRVI--------------------ARETDEAGNLISEWDDT--PEGFGRIAATTARQVML 111
Query: 120 QKVREAERDRQYLEFKDKVGEIISGTVKRVEYGN----VIVDLGNSD----GVIRRDETI 171
Q+ R+AE +R Y EF + GEI++G ++R N V+V +G GVI E +
Sbjct: 112 QRFRDAENERTYGEFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQV 171
Query: 172 SRENLRPGDRVKSYIYDVRREQRGPQVLLSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSR 231
E+ G+R++ Y+ V R R P + LSRTHP + KLF +EVPEI +G V++ AV+R
Sbjct: 172 PGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAR 231
Query: 232 DPGSRAKLAVFSSDSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSATFVINAL 291
+ G R+K+AV S+ + ++ GAC+G G RV+ V++EL EKIDI+ + D A FV NAL
Sbjct: 232 EAGHRSKIAVRSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANAL 291
Query: 292 RPAIVTKV-VLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEEEDSIN 350
PA V V V+D+ V+VP QLSLAIG+ GQN RLA++LTGW IDI +
Sbjct: 292 SPAKVVSVSVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAXXXXX 351
Query: 351 RQKDFNERTQFFM 363
Q +
Sbjct: 352 GQPEPGVSRGMAH 364