HHsearch results for GI: 254780789 and protein with PDBid: 1ib8_A
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=100.00 E-value=3.9e-42 Score=282.10 Aligned_cols=151 Identities=26% Similarity=0.490 Sum_probs=138.4
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEEEEEEEC-CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCC--CCCCCCCCEEEEE
Q ss_conf 12799999999999974797799999954-99868999996587787899999999998752021--1356765079997
Q gi|254780789|r 19 MGLAGDISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVERDDGNMTLRDCEELSQAISPILDV--ENIIEGHYRLEVS 95 (192)
Q Consensus 19 ~~i~~~i~~li~p~v~~lG~eLv~v~~~~-~~~~~LrI~ID~~dg~i~iddC~~vSr~i~~~LD~--~d~i~~~Y~LEVS 95 (192)
..+.+.|+++++|+++ .||+||+|++.+ +++++||||||+++| |++|||+.+||.|++.||+ +|+++++|+||||
T Consensus 8 ~~i~e~i~~li~p~~~-~g~eL~die~~~~~~~~~lrI~ID~~~g-v~iddC~~vSr~i~~~LD~~~~d~i~~~Y~LEVS 85 (164)
T 1ib8_A 8 ATIVELVREVVEPVIE-APFELVDIEYGKIGSDMILSIFVDKPEG-ITLNDTADLTEMISPVLDTIKPDPFPEQYFLEIT 85 (164)
T ss_dssp HHHHHHHHHHHHHHHC-SSSEEEEEEEEEETTEEEEEEEEECSSC-CCHHHHHHHHHHHGGGTTTCCSCCCCSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHH-CCCEEEEEEEEECCCCEEEEEEEECCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
T ss_conf 9999999999899986-6988999999908996799999999999-4589999999999987535446667875799996
Q ss_pred ECCCCCCCCCHHHHHHHHCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEHHHHHHCCEECC
Q ss_conf 27887744578999987105688987226688078999985126975999963554567777269976887651725046
Q gi|254780789|r 96 SPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIVT 175 (192)
Q Consensus 96 SPGidRpL~~~~~f~r~~G~~VkV~l~~~~~g~k~~~G~L~~v~~~~i~l~~~~~~~k~~~~~~v~ip~~~I~kAkLv~~ 175 (192)
|||++|||++++||+||+|+.|+|+|+.+.+|+++|+|+|.+++++.++|.+..+.. ..+++|||++|++|||++.
T Consensus 86 SPGldRpL~~~~~f~r~~G~~v~V~l~~~~~~~k~~~G~L~~v~~~~i~l~~~~~~~----~~~~~I~~~~I~ka~l~ve 161 (164)
T 1ib8_A 86 SPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTR----KKTVQIPYSLVSKARLAVK 161 (164)
T ss_dssp CCSSSSCCSSHHHHHHHCSEEEEEECSSCSSSCSEEEEEEEEEETTEEEEEEECSSC----EEEEEECSSCCSSCEEECS
T ss_pred CCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCEEEEEEEEEEECCEEEEEEECCCC----CEEEEEEHHHCCEEEEEEE
T ss_conf 699885437979999865957999996476993899999999749989999923777----6599970698146999999