RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780789|ref|YP_003065202.1| hypothetical protein CLIBASIA_03400 [Candidatus Liberibacter asiaticus str. psy62] (192 letters) >gnl|CDD|178857 PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed. Length = 154 Score = 128 bits (325), Expect = 7e-31 Identities = 52/156 (33%), Positives = 89/156 (57%), Gaps = 8/156 (5%) Query: 20 GLAGDISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVERDDGNMTLRDCEELSQAISP 78 L ++ +I+PV+E + + V + + E ++ L+I+++++ G L DCEE+S+ IS Sbjct: 4 PLEEQLTELIEPVVEALGYELVDVEYVKEGRDSTLRIYIDKEGGI-DLDDCEEVSRQISA 62 Query: 79 ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138 +LDVE+ I G Y LEVSSPG+DRP+ + DF R+ G V ++ ++K G ++ Sbjct: 63 VLDVEDPIPGAYTLEVSSPGLDRPLKKARDFRRFIGREVKVKLYEPIDGRKKFQGILLAV 122 Query: 139 SETGFFLEKEKRGEKDMNELQIAISFDSLLSARLIV 174 LE E + E ++ I D++ ARL+V Sbjct: 123 DGETVTLEVEGK------EKEVEIPLDNIAKARLVV 152 >gnl|CDD|184775 PRK14636, PRK14636, hypothetical protein; Provisional. Length = 176 Score = 101 bits (252), Expect = 2e-22 Identities = 50/160 (31%), Positives = 84/160 (52%), Gaps = 9/160 (5%) Query: 25 ISSVIQPVIEEMSFRSVQISLLE-EKNLLLQIFVER-DDGNMTLRDCEELSQAISPILDV 82 ++++I+P + + V++++ + + LQI ER D + + DC LS+ +S + D Sbjct: 7 LTALIEPEAKALGLDLVRVAMFGGKSDPTLQIMAERPDTRQLVIEDCAALSRRLSDVFDE 66 Query: 83 ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142 + IE YRLEVSSPGIDRP+ R DF W GH + +++ G++ G Sbjct: 67 LDPIEDAYRLEVSSPGIDRPLTRPKDFADWAGHEARIALSEPLDGRKQFRGELKGIDGDT 126 Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARLIVTDELLRAS 182 + K GE + F ++ SA+LI+TD L+ A+ Sbjct: 127 VTIADNKAGEV-------ILPFAAIESAKLILTDALIAAT 159 >gnl|CDD|173110 PRK14647, PRK14647, hypothetical protein; Provisional. Length = 159 Score = 87.5 bits (217), Expect = 2e-18 Identities = 33/94 (35%), Positives = 63/94 (67%), Gaps = 2/94 (2%) Query: 25 ISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERDDGNMTLRDCEELSQAISPILDVE 83 ++ + + V+ + V++ E + ++L++F++++ G + L DC E+S+ +S ILDVE Sbjct: 10 VTELAEQVLSSLGLELVELEYKREGREMVLRLFIDKEGG-VNLDDCAEVSRELSEILDVE 68 Query: 84 NIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117 + I Y LEVSSPG+DRP+ +++D+ R+ G +V Sbjct: 69 DFIPERYTLEVSSPGLDRPLKKEADYERYAGRLV 102 >gnl|CDD|173103 PRK14640, PRK14640, hypothetical protein; Provisional. Length = 152 Score = 68.1 bits (166), Expect = 1e-12 Identities = 27/83 (32%), Positives = 55/83 (66%), Gaps = 1/83 (1%) Query: 53 LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRW 112 L+++++ ++G +++ +C E+S + I+DVE+ I Y LEVSSPG+DRP+ + + F ++ Sbjct: 37 LRVYIDGENG-VSVENCAEVSHQVGAIMDVEDPITEEYYLEVSSPGLDRPLFKVAQFEKY 95 Query: 113 NGHVVACEIVLSSGDKQKLIGKI 135 G A + +++ +++K G I Sbjct: 96 VGQEAAVTLRMATNNRRKFKGVI 118 >gnl|CDD|184777 PRK14638, PRK14638, hypothetical protein; Provisional. Length = 150 Score = 66.8 bits (163), Expect = 4e-12 Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 12/126 (9%) Query: 47 EEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRK 106 E + +L+I ++ G +++RDCE S+ I LD E++IE Y LEVSSPG+DRP+ Sbjct: 33 ESRGWVLRIIIDNPVGYVSVRDCELFSREIERFLDREDLIEHSYTLEVSSPGLDRPLRGP 92 Query: 107 SDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDS 166 D++R+ G + +IV G + IG+I + + EK + I+ D Sbjct: 93 KDYVRFTGKLA--KIVTKDG--KTFIGRIESFVDGTITISDEKE--------KYEINIDD 140 Query: 167 LLSARL 172 + A L Sbjct: 141 VKRANL 146 >gnl|CDD|173102 PRK14639, PRK14639, hypothetical protein; Provisional. Length = 140 Score = 61.8 bits (150), Expect = 1e-10 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 10/111 (9%) Query: 61 DGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACE 120 +G + L DCE LS+ +SPI DVE + G Y LEVSSPG++R + + F + G +V Sbjct: 35 EGGVNLDDCERLSELLSPIFDVEPPVSGEYFLEVSSPGLERKLSKIEHFAKSIGELVK-- 92 Query: 121 IVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKDMNELQIAISFDSLLSAR 171 +++ +K+K GKI+ + LE + EK I+F+ + A+ Sbjct: 93 --ITTNEKEKFEGKIVSVDDENITLENLENKEK------TTINFNDIKKAK 135 >gnl|CDD|184780 PRK14645, PRK14645, hypothetical protein; Provisional. Length = 154 Score = 59.8 bits (145), Expect = 5e-10 Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 24 DISSVIQPVIEEMSFRSVQISLL-EEKNLLLQIFVER-DDGNMTLRDCEELSQAISPILD 81 D+ + + +E + + +++ + ++ + ++R D+ +T+ D E S+A+ LD Sbjct: 10 DLQQLAEGALEPLGYEVLEVQVQRSGGKRIVLVRIDRKDEQPVTVEDLERASRALEAELD 69 Query: 82 VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNG 114 + IEG YRLEV SPG RP+ F R+ G Sbjct: 70 RLDPIEGEYRLEVESPGPKRPLFTARHFERFAG 102 >gnl|CDD|184773 PRK14631, PRK14631, hypothetical protein; Provisional. Length = 174 Score = 55.7 bits (134), Expect = 8e-09 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 22/142 (15%) Query: 52 LLQIFVER-----------DDGN------MTLRDCEELSQAISPILDVENIIEGHYRLEV 94 LL+I+++R +DG + + DC ++Q + +LDV + I G Y LEV Sbjct: 38 LLRIYIDRLVEENAEPVINEDGEVEQGRGIGVEDCVRVTQQVGAMLDVHDPISGEYALEV 97 Query: 95 SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKRGEKD 154 SSPG DRP + + G VA ++ + +++K K++ LE E+ + Sbjct: 98 SSPGWDRPFFQLEQLQGYIGQQVALRLIAAVENRRKFQAKLLAVD-----LENEEIQVEV 152 Query: 155 MNELQIAISFDSLLSARLIVTD 176 + + I +++ A LI D Sbjct: 153 EGKHVLDIDSNNIDKANLIYQD 174 >gnl|CDD|173096 PRK14633, PRK14633, hypothetical protein; Provisional. Length = 150 Score = 55.4 bits (133), Expect = 8e-09 Identities = 26/81 (32%), Positives = 53/81 (65%), Gaps = 1/81 (1%) Query: 21 LAGDISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPIL 80 L D+ +++P+ ++ + I ++ L ++IF++ ++G +++ DC+ +S+ IS + Sbjct: 2 LLDDLYEIVEPITADLGYILWGIEVVGSGKLTIRIFIDHENG-VSVDDCQIVSKEISAVF 60 Query: 81 DVENIIEGHYRLEVSSPGIDR 101 DVE+ + G Y LEVSSPG++R Sbjct: 61 DVEDPVSGKYILEVSSPGMNR 81 >gnl|CDD|173095 PRK14632, PRK14632, hypothetical protein; Provisional. Length = 172 Score = 54.7 bits (131), Expect = 1e-08 Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%) Query: 25 ISSVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISPILDVEN 84 I+ + P + + I L ++++FV+ +G +T+ C E+S+ + L+VE+ Sbjct: 10 IADMAGPFLASLGLELWGIELSYGGRTVVRLFVDGPEG-VTIDQCAEVSRHVGLALEVED 68 Query: 85 IIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGD---KQKLIGKIMGTSET 141 +I Y LEVSSPG++RP R + G + ++ + + ++K G+++ Sbjct: 69 VISSAYVLEVSSPGLERPFFRAEQMSPYVGRQIELTLIDPTPEWPGRRKFRGELLAVEGD 128 Query: 142 GFFLEKEKRGEKDMNELQIAISFDSLLSARLI 173 L E + E + S+ + A LI Sbjct: 129 TVVLRPEGAPAPEAEEAVLRTSWQGVRKANLI 160 >gnl|CDD|184778 PRK14642, PRK14642, hypothetical protein; Provisional. Length = 197 Score = 53.3 bits (128), Expect = 4e-08 Identities = 23/54 (42%), Positives = 38/54 (70%), Gaps = 2/54 (3%) Query: 64 MTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVV 117 +T+ DCE++++ + L+V+ + + RLEVSSPGIDRP+ + DF R+ G V+ Sbjct: 52 VTVEDCEKVTRQLQFALEVDGV--DYKRLEVSSPGIDRPLRHEQDFERFAGEVI 103 >gnl|CDD|184776 PRK14637, PRK14637, hypothetical protein; Provisional. Length = 151 Score = 49.9 bits (119), Expect = 5e-07 Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 20/150 (13%) Query: 27 SVIQPVIEEMSFRSVQISLLEEKNLLLQIFVERDDGNMTLRDCEELSQAISP----ILDV 82 S +PV+E + + V +S ++ V G + L DC + + + P + V Sbjct: 12 SECEPVVEGLGCKLVDLSRRVQQAQGRVRAVIYSAGGVGLDDCARVHRILVPRLEALGGV 71 Query: 83 ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETG 142 ++ LEVSSPGI+R + ++F + G V V Q +G I ET Sbjct: 72 RDVF-----LEVSSPGIERVIKNAAEFSIFVGETVK---VWFECTGQWQVGTIAEADETC 123 Query: 143 FFLEKEKRGEKDMNELQIAISFDSLLSARL 172 L + + I + + A+L Sbjct: 124 LVLTSDGV--------PVTIPYVQITKAQL 145 >gnl|CDD|173097 PRK14634, PRK14634, hypothetical protein; Provisional. Length = 155 Score = 40.2 bits (94), Expect = 3e-04 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 24/159 (15%) Query: 24 DISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDG-NMTLRDCEELSQAISPILD 81 D+ ++ + F I +L + LQ+ + R G +++L DC S + L+ Sbjct: 8 DLETLASATAADKGFELCGIQVLTHLQPMTLQVQIRRSSGSDVSLDDCAGFSGPMGEALE 67 Query: 82 VENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141 ++ Y LE+SSPGI + DF + G V G +Q+L G ++ Sbjct: 68 ASQLLTEAYVLEISSPGIGDQLSSDRDFQTFRGFPVEVSHRDDDGSEQRLEGLLL----- 122 Query: 142 GFFLEKEKRGEKDMNELQI-------AISFDSLLSARLI 173 E++ + LQI I DS++S RL Sbjct: 123 ----------ERNEDHLQINIRGRIKRIPRDSVISVRLT 151 >gnl|CDD|173109 PRK14646, PRK14646, hypothetical protein; Provisional. Length = 155 Score = 38.0 bits (88), Expect = 0.002 Identities = 21/99 (21%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 25 ISSVIQPVIEEMSFRSVQISLLEEKN-LLLQIFVERDDGN-MTLRDCEELSQAISPILDV 82 + +++ V E + +++ +N ++++I +++ +G+ ++L DC + S ++ Sbjct: 9 LEILLEKVANEFDLKICSLNIQTNQNPIVIKIIIKKTNGDDISLDDCALFNTPASEEIEN 68 Query: 83 ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEI 121 N++ Y LE+SS G+ + + DF + G V E+ Sbjct: 69 SNLLNCSYVLEISSQGVSDELTSERDFKTFKGFPVNVEL 107 >gnl|CDD|179358 PRK02001, PRK02001, hypothetical protein; Validated. Length = 152 Score = 36.9 bits (86), Expect = 0.003 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 17/116 (14%) Query: 45 LLEEKNLLL---------QIFVERD-DGNMTLRDCEELSQAISPILDVENIIEGHYRLEV 94 LLE L L +I VE D D + + DC ELS+AI LD E E + LEV Sbjct: 14 LLEGPELFLVDLTISPDNKIVVEIDGDEGVWIEDCVELSRAIEHNLDRE---EEDFELEV 70 Query: 95 SSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGTSETGFFLEKEKR 150 S G+ P+ + + G + E++ +G +K+ G++ E LE + R Sbjct: 71 GSAGLTSPLKVPRQYKKNIGREL--EVLTKNG--KKIEGELKSADENDITLEVKAR 122 >gnl|CDD|184779 PRK14644, PRK14644, hypothetical protein; Provisional. Length = 136 Score = 32.9 bits (75), Expect = 0.057 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 11/69 (15%) Query: 43 ISLLEEK--NLLLQIFVERDDGNMTLR---------DCEELSQAISPILDVENIIEGHYR 91 L EK N + +I + ++DG++ L D EEL++ IS +D ++ Sbjct: 4 KEKLLEKFGNKINEIKIVKEDGDLFLEVILNSRDLKDIEELTKEISDFIDNLSVEFDFDS 63 Query: 92 LEVSSPGID 100 L++SSPG D Sbjct: 64 LDISSPGFD 72 >gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional. Length = 479 Score = 30.8 bits (70), Expect = 0.25 Identities = 8/23 (34%), Positives = 14/23 (60%), Gaps = 1/23 (4%) Query: 11 YEPRIFGDMGLAGDISSVIQPVI 33 Y P IF +G + D +++Q +I Sbjct: 293 YAPEIFKTLGASTD-IALLQTII 314 >gnl|CDD|173106 PRK14643, PRK14643, hypothetical protein; Provisional. Length = 164 Score = 30.2 bits (68), Expect = 0.33 Identities = 20/96 (20%), Positives = 48/96 (50%), Gaps = 12/96 (12%) Query: 24 DISSVIQPVIEEMSFRSVQISLLEE-KNLLLQIFVERD-------DGNMTLRDCEELSQA 75 I+ ++ +E ++ + +I+ L+E +N ++QI VE D ++ ++ + +S Sbjct: 10 QINELVNKELEVLNLKVYEINNLKEFENDMIQILVEDILQANKPLDFDILIKANDLVSNK 69 Query: 76 ISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLR 111 I + Y LE+SS GI++ + + + ++ Sbjct: 70 IDQFIKTSE----KYLLEISSSGIEKQIRSQEELVK 101 >gnl|CDD|184265 PRK13709, PRK13709, conjugal transfer nickase/helicase TraI; Provisional. Length = 1747 Score = 28.2 bits (63), Expect = 1.2 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 14/66 (21%) Query: 57 VERDDGNMTLRDCEELSQAISPILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWN--- 113 +++DDG +TLRD E ++ ISP E + EG + + +P D V D +R+ Sbjct: 1296 IDKDDGLITLRDAEGNTRLISPR---EAVAEG---VTLYTP--DTIRVGTGDRMRFTKSD 1347 Query: 114 ---GHV 116 G+V Sbjct: 1348 RERGYV 1353 >gnl|CDD|173093 PRK14630, PRK14630, hypothetical protein; Provisional. Length = 143 Score = 27.8 bits (62), Expect = 1.7 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 17/88 (19%) Query: 79 ILDVENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHVVACEIVLSSGDKQKLIGKIMGT 138 +L +E +++ ++ LE+S+PGI+R + KSD E + G K KL+ + Sbjct: 62 LLILEAVLKYNFSLEISTPGINRKI--KSDR----------EFKIFEGKKIKLM--LDND 107 Query: 139 SETGFFLEKEKRG---EKDMNELQIAIS 163 E GF LE + + D E+ + S Sbjct: 108 FEEGFILEAKADSFIFKTDSKEVNVLYS 135 >gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase. Length = 484 Score = 27.8 bits (62), Expect = 1.8 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Query: 110 LRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141 L+ NGH+V IV++ G Q LI + M +S+ Sbjct: 303 LKENGHMV---IVVAEGAGQDLIAESMESSDL 331 >gnl|CDD|173104 PRK14641, PRK14641, hypothetical protein; Provisional. Length = 173 Score = 27.0 bits (60), Expect = 3.0 Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Query: 53 LQIFVERDDGNMTLRDCEELSQAISPILDVENIIEG----HYRLEVSSPGIDRPMVRKSD 108 +++ ++ D G + + C S+ I L+ + + G + L VSSPG+ P++ Sbjct: 40 IEVLLDADTG-IRIDQCAFFSRRIRERLEEDEELLGLVGEDFDLMVSSPGLGEPIILPRQ 98 Query: 109 FLRWNGHVVACEIVLSSGDKQKLIGKIMGTSET 141 + R G ++ G + ++ G + S T Sbjct: 99 YGRHVGRLLRVTYRDEEGSEHEVTGHLQEVSLT 131 >gnl|CDD|152641 pfam12206, DUF3599, Domain of unknown function (DUF3599). This family of proteins is found in bacteria. Proteins in this family are approximately 120 amino acids in length. This domain is the phage-like element pbsx protein xkdh. Length = 116 Score = 27.0 bits (60), Expect = 3.0 Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 4/34 (11%) Query: 83 ENIIEGHYRLEVSSPGIDRPMVRKSDFLRWNGHV 116 I + + G D +R +D + W+G V Sbjct: 64 NQSIYQSFLVHFP-LGTD---IRVNDKVIWDGVV 93 >gnl|CDD|181392 PRK08332, PRK08332, ribonucleotide-diphosphate reductase subunit alpha; Validated. Length = 1740 Score = 26.7 bits (58), Expect = 4.3 Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 164 FDSLLSARLIVTDELLRASLNNYGSYAGL 192 F++ L R + ++ELL+ +NYGS GL Sbjct: 1509 FEAELKKRGLYSEELLKKISDNYGSVQGL 1537 >gnl|CDD|185451 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional. Length = 1388 Score = 26.2 bits (58), Expect = 5.1 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 35/140 (25%) Query: 63 NMTLRDCEELSQAISPILDVENIIEGHY--RLE---------VSSPGIDRPMVRKSDFLR 111 NM L D + S D +I++ Y RL+ + ++R + R S+ +R Sbjct: 962 NMVLFDENGKIKKYS---DALDILKEFYLVRLDLYKKRKEYLLGK--LERELARLSNKVR 1016 Query: 112 WNGHVVACEIVLSSGDKQKLI-------------------GKIMGTSETGFFLEKEKRGE 152 + HV+ E+V+++ K+ L+ KI E G + E E Sbjct: 1017 FIKHVINGELVITNAKKKDLVKELKKLGYVRFKDIIKKKSEKITAEEEEGAEEDDEADDE 1076 Query: 153 KDMNELQIAISFDSLLSARL 172 D EL A+S+D LLS + Sbjct: 1077 DDEEELGAAVSYDYLLSMPI 1096 >gnl|CDD|183380 PRK11916, PRK11916, electron transfer flavoprotein subunit YdiR; Provisional. Length = 312 Score = 26.0 bits (57), Expect = 5.6 Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 16 FGDMGLAGDISSVIQPVIEEMS 37 + D GL GDI V+ +I ++S Sbjct: 290 YADYGLVGDIYKVVPALISQLS 311 >gnl|CDD|181142 PRK07846, PRK07846, mycothione reductase; Reviewed. Length = 451 Score = 25.7 bits (57), Expect = 8.1 Identities = 8/13 (61%), Positives = 12/13 (92%) Query: 26 SSVIQPVIEEMSF 38 S++IQP+I+ MSF Sbjct: 408 STLIQPLIQAMSF 420 >gnl|CDD|162319 TIGR01367, pyrE_Therm, orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species. Length = 187 Score = 25.5 bits (56), Expect = 10.0 Identities = 8/13 (61%), Positives = 9/13 (69%) Query: 55 IFVERDDGNMTLR 67 IF ER+ G M LR Sbjct: 85 IFAEREGGGMKLR 97 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.318 0.137 0.382 Gapped Lambda K H 0.267 0.0661 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 3,098,055 Number of extensions: 193145 Number of successful extensions: 304 Number of sequences better than 10.0: 1 Number of HSP's gapped: 298 Number of HSP's successfully gapped: 33 Length of query: 192 Length of database: 5,994,473 Length adjustment: 88 Effective length of query: 104 Effective length of database: 4,092,969 Effective search space: 425668776 Effective search space used: 425668776 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 54 (24.7 bits)