HHsearch alignment for GI: 254780791 and conserved domain: PRK11154

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=90.75  E-value=0.62  Score=28.49  Aligned_cols=83  Identities=19%  Similarity=0.306  Sum_probs=43.1

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC-H---HHHHHCC--------------HHHHHHHHHHCCCEEE
Q ss_conf             11103679999999974100357677758999516888-4---4422007--------------6999999974890488
Q gi|254780791|r  183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS-I---EDLWHFN--------------DEMIVRAIANSSIPII  244 (529)
Q Consensus       183 G~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS-~---eDL~~FN--------------~e~laraI~~~~iPVi  244 (529)
T Consensus        32 ~~~~~~~L~~~l~~~~~d~------~vr~vVl~sg~g~~F~AGaDl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvI  105 (706)
T PRK11154         32 KAEFAEQVRAILKQIKEDK------SLKGVVFISGKPDNFIAGADINMLAACKTAQEAEALARQGQQLFAEIEALPIPVV  105 (706)
T ss_pred             CHHHHHHHHHHHHHHHHCC------CCEEEEEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf             9999999999999985099------9669999517998047072977672478757799999888999999980999889


Q ss_pred             EEE-------CCCCCCHHHHHHHCCCCCCCHHHHHHHCC
Q ss_conf             520-------57775258988641237772145676332
Q gi|254780791|r  245 SAI-------GHETDWTLADYAADLRAPTPTGAAEMAVP  276 (529)
Q Consensus       245 sgI-------GHE~D~Tl~D~VAD~Ra~TPTaAAElavp  276 (529)
T Consensus       106 AAvnG~a~GgG~E-----laLacD~RiAs~~a~~~~g~P  139 (706)
T PRK11154        106 AAIHGACLGGGLE-----LALACHYRVCTDDPKTVLGLP  139 (706)
T ss_pred             EEECCEEEHHHHH-----HHHHCCEEEECCCCCCCCCCC
T ss_conf             9987864189999-----999689999617846321364