>cd04489 ExoVII_LU_OBF ExoVII_LU_OBF: A subfamily of OB folds corresponding to the N-terminal OB-fold domain of Escherichia coli exodeoxyribonuclease VII (ExoVII) large subunit. E. coli ExoVII is composed of two non-identical subunits. E. coli ExoVII is a single-strand-specific exonuclease which degrades ssDNA from both 3-prime and 5-prime ends. ExoVII plays a role in methyl-directed mismatch repair in vivo. ExoVII may also guard the genome from mutagenesis by removing excess ssDNA, since the build up of ssDNA would lead to SOS induction and PolIV-dependent mutagenesis.

Probab=99.79 E-value=8.1e-19 Score=188.15 Aligned_cols=78 Identities=41% Similarity=0.776 Sum_probs=75.3 Q ss_pred CEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECC Q ss_conf 1899999705435688862799987489479999973521058668145988999999667528843799999710168 Q gi|254780791|r 34 HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 (529) Q Consensus 34 ~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~~~g 112 (529) T Consensus 1 ~vwV~GEIs~~~-~~~sGh~Yf~LkD~~a~i~~v~~~~~~~~~~~~~~~G~~V~v~g~~~~y~~~G~~ql~v~~i~~~G 78 (78) T cd04489 1 RVWVEGEISNLK-RPSSGHLYFTLKDEDASIRCVMWRSNARRLGFPLEEGMEVLVRGKVSFYEPRGGYQLIVEEIEPAG 78 (78) T ss_pred CEEEEEEECCCE-ECCCCEEEEEEECCCEEEEEEEEHHHHHHCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECC T ss_conf 989999988558-289963999994788199999966788327999889989999999999989840999999999782

HHsearch alignment for GI: 254780791 and conserved domain: cd04489