HHsearch alignment for GI: 254780791 and conserved domain: pfam02601

>pfam02601 Exonuc_VII_L Exonuclease VII, large subunit. This family consist of exonuclease VII, large subunit EC:3.1.11.6 This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.
Probab=100.00  E-value=0  Score=662.42  Aligned_cols=293  Identities=37%  Similarity=0.549  Sum_probs=258.8

Q ss_pred             CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             2261001631026528999847842589999998630597-589997210011110367999999997410035767775
Q gi|254780791|r  132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD  210 (529)
Q Consensus       132 lfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D  210 (529)
T Consensus         1 LFd~~~Kk~lP~~p~~IgvITS~~gAa~~Di~~~~~~r~p~~~i~l~p~~VQG~~a~~~I~~ai~~~~~~~~---~~~~D   77 (295)
T pfam02601         1 LFDPNRKRPLPRFPKRIAVITSATGAAYQDFLRTARRRGPLVEIEIYPTLVQGDGAAESIVSALERANERET---ALDYD   77 (295)
T ss_pred             CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC---CCCCC
T ss_conf             988212899999999899984894089999999999819996799947357650489999999999984689---89983


Q ss_pred             EEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf             89995168884442200769999999748904885205777525898864123777214567633234677766999998
Q gi|254780791|r  211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA  290 (529)
Q Consensus       211 ~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPTaAAElavp~~~EL~~~L~~l~~  290 (529)
T Consensus        78 viii~RGGGS~eDL~~FN~e~laraI~~~~iPvisaIGHEtD~Tl~D~VAD~Ra~TPTaAAe~ivp~~~~l~~~l~~~~~  157 (295)
T pfam02601        78 VIVIIRGGGSKEDLWVFNDEELARAIANSPIPVITGIGHETDTTIADLVADVRAATPTAAAELLVPDRTELLQKLEGLEQ  157 (295)
T ss_pred             EEEEECCCCCHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             89995786888987455889999999838998780678899961888887500589899999965449999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf             88778998889999855677653049-78898678887888654568999999875688999998410113468899999
Q gi|254780791|r  291 RLNNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN  369 (529)
Q Consensus       291 RL~~a~~~~l~~~~q~L~~l~r~L~~-~~~~L~~~~QrLd~~~~rL~~~l~~~l~~~~~~l~~~~~rL~~~~~~~~l~~~  369 (529)
T Consensus       158 ~l~~~~~~~l~~~~~~L~~l~~~l~~~~~~~l~~~~~~L~~~~~rl~~~~~~~l~~~~~~L~~~~---------------  222 (295)
T pfam02601       158 RLSRALKNRLEKEQDRLNLLRERLKSLSRRKLEQHEERLAELYQRLESSIQNLLSRKQSRLERLK---------------  222 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------
T ss_conf             99999999999999999999975147829999999999999999999999999999999999999---------------


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999988765556788887767777788750268899999999999999999999999999999999999988
Q gi|254780791|r  370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL  449 (529)
Q Consensus       370 r~~L~~~q~~L~q~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~l~~l~~rL~~~~~~~L~~~~~rL~~l~~~L  449 (529)
T Consensus       223 -------------------------------------------------------~~~~~-~~~~~~~~~~~l~~l~~~L  246 (295)
T pfam02601       223 -------------------------------------------------------LNREL-EKNSVLENKLALENLTAQL  246 (295)
T ss_pred             -------------------------------------------------------HHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf             -------------------------------------------------------98888-9999999999999999999


Q ss_pred             HHCCHHHHHCCCEEEEECCCCCEECCHHHCCCCCEEEEEEECEEEEEEE
Q ss_conf             7169677731461999848988957778929998699999110999999
Q gi|254780791|r  450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV  498 (529)
Q Consensus       450 ~slsP~~~L~RGYaiv~~~~GkiI~s~~~l~~gd~i~i~l~DG~v~a~V  498 (529)
T Consensus       247 ~~lsP~~vL~RGYaiv~~~~gkiI~s~~~l~~gd~l~i~~~DG~i~a~V  295 (295)
T pfam02601       247 KALSPLKTLKRGFAIVRRKDGKIVTSAAELKPGDNLEIRLADGSAQAKV  295 (295)
T ss_pred             HHCCHHHHHHCCEEEEECCCCCEECCHHHCCCCCEEEEEEECEEEEEEC
T ss_conf             9679677984860899969999974889979999799999440799879