HHsearch alignment for GI: 254780791 and conserved domain: pfam02601
>pfam02601 Exonuc_VII_L Exonuclease VII, large subunit. This family consist of exonuclease VII, large subunit EC:3.1.11.6 This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.
Probab=100.00 E-value=0 Score=662.42 Aligned_cols=293 Identities=37% Similarity=0.549 Sum_probs=258.8
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 2261001631026528999847842589999998630597-589997210011110367999999997410035767775
Q gi|254780791|r 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 (529)
Q Consensus 132 lfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D 210 (529)
T Consensus 1 LFd~~~Kk~lP~~p~~IgvITS~~gAa~~Di~~~~~~r~p~~~i~l~p~~VQG~~a~~~I~~ai~~~~~~~~---~~~~D 77 (295)
T pfam02601 1 LFDPNRKRPLPRFPKRIAVITSATGAAYQDFLRTARRRGPLVEIEIYPTLVQGDGAAESIVSALERANERET---ALDYD 77 (295)
T ss_pred CCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC---CCCCC
T ss_conf 988212899999999899984894089999999999819996799947357650489999999999984689---89983
Q ss_pred EEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 89995168884442200769999999748904885205777525898864123777214567633234677766999998
Q gi|254780791|r 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 (529)
Q Consensus 211 ~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPTaAAElavp~~~EL~~~L~~l~~ 290 (529)
T Consensus 78 viii~RGGGS~eDL~~FN~e~laraI~~~~iPvisaIGHEtD~Tl~D~VAD~Ra~TPTaAAe~ivp~~~~l~~~l~~~~~ 157 (295)
T pfam02601 78 VIVIIRGGGSKEDLWVFNDEELARAIANSPIPVITGIGHETDTTIADLVADVRAATPTAAAELLVPDRTELLQKLEGLEQ 157 (295)
T ss_pred EEEEECCCCCHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 89995786888987455889999999838998780678899961888887500589899999965449999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 88778998889999855677653049-78898678887888654568999999875688999998410113468899999
Q gi|254780791|r 291 RLNNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 (529)
Q Consensus 291 RL~~a~~~~l~~~~q~L~~l~r~L~~-~~~~L~~~~QrLd~~~~rL~~~l~~~l~~~~~~l~~~~~rL~~~~~~~~l~~~ 369 (529)
T Consensus 158 ~l~~~~~~~l~~~~~~L~~l~~~l~~~~~~~l~~~~~~L~~~~~rl~~~~~~~l~~~~~~L~~~~--------------- 222 (295)
T pfam02601 158 RLSRALKNRLEKEQDRLNLLRERLKSLSRRKLEQHEERLAELYQRLESSIQNLLSRKQSRLERLK--------------- 222 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------
T ss_conf 99999999999999999999975147829999999999999999999999999999999999999---------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999988765556788887767777788750268899999999999999999999999999999999999988
Q gi|254780791|r 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 (529)
Q Consensus 370 r~~L~~~q~~L~q~~~~~l~~~~~~~~~~~~~l~~l~~~~~~~l~~~~~~l~~l~~rL~~~~~~~L~~~~~rL~~l~~~L 449 (529)
T Consensus 223 -------------------------------------------------------~~~~~-~~~~~~~~~~~l~~l~~~L 246 (295)
T pfam02601 223 -------------------------------------------------------LNREL-EKNSVLENKLALENLTAQL 246 (295)
T ss_pred -------------------------------------------------------HHHHH-HHHHHHHHHHHHHHHHHHH
T ss_conf -------------------------------------------------------98888-9999999999999999999
Q ss_pred HHCCHHHHHCCCEEEEECCCCCEECCHHHCCCCCEEEEEEECEEEEEEE
Q ss_conf 7169677731461999848988957778929998699999110999999
Q gi|254780791|r 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 (529)
Q Consensus 450 ~slsP~~~L~RGYaiv~~~~GkiI~s~~~l~~gd~i~i~l~DG~v~a~V 498 (529)
T Consensus 247 ~~lsP~~vL~RGYaiv~~~~gkiI~s~~~l~~gd~l~i~~~DG~i~a~V 295 (295)
T pfam02601 247 KALSPLKTLKRGFAIVRRKDGKIVTSAAELKPGDNLEIRLADGSAQAKV 295 (295)
T ss_pred HHCCHHHHHHCCEEEEECCCCCEECCHHHCCCCCEEEEEEECEEEEEEC
T ss_conf 9679677984860899969999974889979999799999440799879