HHsearch alignment for GI: 254780791 and conserved domain: pfam02601
>pfam02601 Exonuc_VII_L Exonuclease VII, large subunit. This family consist of exonuclease VII, large subunit EC:3.1.11.6 This enzyme catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.
Probab=93.22 E-value=0.94 Score=26.87 Aligned_cols=165 Identities=20% Similarity=0.228 Sum_probs=85.5
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE---EECCCCCHHHHHHCCHHHHHHHHHHCC------CE--EEE--EEC
Q ss_conf 11110367999999997410035767775899---951688844422007699999997489------04--885--205
Q gi|254780791|r 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIII---LARGGGSIEDLWHFNDEMIVRAIANSS------IP--IIS--AIG 248 (529)
Q Consensus 182 QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii---i~RGGGS~eDL~~FN~e~laraI~~~~------iP--Vis--gIG 248 (529)
T Consensus 23 ~~gAa~~Di~~~~~~---r~-----p~~~i~l~p~~VQG~~a~~--------~I~~ai~~~~~~~~~~~~Dviii~RGGG 86 (295)
T pfam02601 23 ATGAAYQDFLRTARR---RG-----PLVEIEIYPTLVQGDGAAE--------SIVSALERANERETALDYDVIVIIRGGG 86 (295)
T ss_pred CCCHHHHHHHHHHHH---HC-----CCCEEEEECCCCCCCHHHH--------HHHHHHHHHHHCCCCCCCCEEEEECCCC
T ss_conf 940899999999998---19-----9967999473576504899--------9999999998468989983899957868
Q ss_pred CC------CCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf 77------752589886412377721456763323467776699999888778998889999855677653049788986
Q gi|254780791|r 249 HE------TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 (529)
Q Consensus 249 HE------~D~Tl~D~VAD~Ra~TPTaAAElavp~~~EL~~~L~~l~~RL~~a~~~~l~~~~q~L~~l~r~L~~~~~~L~ 322 (529)
T Consensus 87 S~eDL~~FN~e~laraI~~~~iPvisaIG-------HEtD~Tl~D~VAD~Ra~TPTaA----------Ae~i---vp~~~ 146 (295)
T pfam02601 87 SKEDLWVFNDEELARAIANSPIPVITGIG-------HETDTTIADLVADVRAATPTAA----------AELL---VPDRT 146 (295)
T ss_pred CHHHHHHCCHHHHHHHHHHCCCCEEECCC-------CCCCCCHHHHHHHHCCCCHHHH----------HHHH---CCCHH
T ss_conf 88987455889999999838998780678-------8999618888875005898999----------9996---54499
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7888788865456899999987568899999841011346889999999999999999988
Q gi|254780791|r 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 (529)
Q Consensus 323 ~~~QrLd~~~~rL~~~l~~~l~~~~~~l~~~~~rL~~~~~~~~l~~~r~~L~~~q~~L~q~ 383 (529)
T Consensus 147 ~l~~~l~~~~~~l~~~~~~~l~~~~~~L~~l~~~l~~~-~~~~l~~~~~~L~~~~~rl~~~ 206 (295)
T pfam02601 147 ELLQKLEGLEQRLSRALKNRLEKEQDRLNLLRERLKSL-SRRKLEQHEERLAELYQRLESS 206 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999751478-2999999999999999999999