HHsearch alignment of GI: 254780791 and MMDB domain: 1c0a_A_1-111
>1c0a_A (A:1-111) Aspartyl tRNA synthetase; protein-RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli}
Probab=94.49 E-value=0.33 Score=30.30 Aligned_cols=78 Identities=10% Similarity=0.164 Sum_probs=60.7
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCC--CCCCCCCCEEEEEEEEEEEC--------CCCEEE
Q ss_conf 71899999705435688862799987489479999973521058--66814598899999966752--------884379
Q gi|254780791|r 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI--EFLPEEGIEFLVIGKITTFP--------GSSKYQ 102 (529)
Q Consensus 33 ~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~--~~~~~~G~~v~~~g~~~~y~--------~~g~~q 102 (529)
..|+|.|=|.+.|. .++..++.|.|..+.+.|++-+...... --.+..|+-|.+.|.+..-+ +-|.+.
T Consensus 16 ~~V~i~Gwv~~~R~--~gk~~Fi~LrD~~g~~Q~~~~~~~~~~~~~~~~l~~~~~V~V~G~v~~~~~~~~~~~~~~g~~E 93 (111)
T 1c0a_A 16 QQVTLCGWVNRRRD--LGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIE 93 (111)
T ss_dssp CEEEEEEEEEEEEE--CSSCEEEEEEETTEEEEEEECGGGHHHHHHHTTCCTTCEEEEEEEEEECCTTTCCTTSTTTTEE
T ss_pred CEEEEEEEEEEEEC--CCCCEEEEEEECCEEEEEEEECCCCCHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEE
T ss_conf 98999998640874--7994999999498679999968743289998539997689999899926877767777887489
Q ss_pred EEEEEEEECC
Q ss_conf 9999710168
Q gi|254780791|r 103 IIIESLIPSG 112 (529)
Q Consensus 103 l~v~~i~~~g 112 (529)
+.|++++.-|
T Consensus 94 i~v~~i~il~ 103 (111)
T 1c0a_A 94 VLASSLTIIN 103 (111)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
T ss_conf 9986999950