HHsearch alignment of GI: 254780791 and MMDB domain: 1ujn_A_1-160
>1ujn_A (A:1-160) Dehydroquinate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus HB8}
Probab=94.74 E-value=0.15 Score=33.42 Aligned_cols=96 Identities=14% Similarity=0.163 Sum_probs=61.5
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCH-HHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 261001631026528999847842-5899999986305975899972100111103679999999974100357677758
Q gi|254780791|r 133 FSDQHKNPIPFIPKIIAVITSPTG-AVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDI 211 (529)
Q Consensus 133 fd~~~k~~lP~~p~~i~vits~~~-a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ 211 (529)
|..+--..+|.+.+|+-|||.... ..+.|-+...-++..+.+..| ..+.++.....+.++++.+... ++|
T Consensus 16 ~g~g~~~~l~~~~kk~liv~d~~~~~~~~~~i~~~l~~~~i~~~~~-~~~~~~~~~~~v~~~~~~~~~~-------~~d- 86 (160)
T 1ujn_A 16 VGEGVLKEVPPLAGPAALLFDRRVEGFAQEVAKALGVRHLLGLPGG-EAAKSLEVYGKVLSWLAEKGLP-------RNA- 86 (160)
T ss_dssp EESCGGGGSCCCSSCEEEEEEGGGHHHHHHHHHHHTCCCEEEECCS-GGGSSHHHHHHHHHHHHHHTCC-------TTC-
T ss_pred ECCCHHHHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCEEEEECCC-CCCCCHHHHHHHHHHHHHHHCC-------CCC-
T ss_conf 8877898778875989999895489999999973588559997898-5648999999999999973103-------566-
Q ss_pred EEEECCCCCHHHHHHCCHHHHHHHHH---HCCCEEEE
Q ss_conf 99951688844422007699999997---48904885
Q gi|254780791|r 212 IILARGGGSIEDLWHFNDEMIVRAIA---NSSIPIIS 245 (529)
Q Consensus 212 iii~RGGGS~eDL~~FN~e~laraI~---~~~iPVis 245 (529)
.||+=||||.-|+ |++++ ...+|.|+
T Consensus 87 ~ivavGGGs~~D~--------aK~~a~~~~~~~p~i~ 115 (160)
T 1ujn_A 87 TLLVVGGGTLTDL--------GGFVAATYLRGVAYLA 115 (160)
T ss_dssp EEEEEESHHHHHH--------HHHHHHHBTTCCEEEE
T ss_pred CEEEECCHHHHHH--------HHHHHHHHCCCCCEEC
T ss_conf 4368524666678--------8887653137850331