HHsearch alignment of GI: 254780791 and MMDB domain: 1x54_A_1-108

>1x54_A (A:1-108) Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=94.15  E-value=0.27  Score=31.18  Aligned_cols=82  Identities=11%  Similarity=0.080  Sum_probs=62.8

Q ss_pred             HHCC-CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCC----CCCCCCCCCEEEEEEEEEEEC-CCCEEE
Q ss_conf             4001-7189999970543568886279998748947999997352105----866814598899999966752-884379
Q gi|254780791|r   29 ESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK----IEFLPEEGIEFLVIGKITTFP-GSSKYQ  102 (529)
Q Consensus        29 ~~~~-~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~----~~~~~~~G~~v~~~g~~~~y~-~~g~~q  102 (529)
                      +... ..|.|.|-|.+.|.  .++..+++|.|..+.+.|++.......    .--.+.-|+-|.|.|.+.--+ +.|++.
T Consensus        12 ~~~~gk~V~i~Gwv~~~R~--~g~~~Fi~lrD~s~~~Q~v~~~~~~~~~~~~~~~~l~~~s~V~V~G~v~~~~~~~~~~E   89 (108)
T 1x54_A           12 PELDGKKVRLAGWVYTNMR--VGKKIFLWIRDSTGIVQAVVAKNVVGEETFEKAKKLGRESSVIVEGIVKADERAPGGAE   89 (108)
T ss_dssp             GGGTTCEEEEEEEEEEEEE--ETTEEEEEEEETTEEEEEEECHHHHCHHHHHHHHTCCTTCEEEEEEEEEECTTSGGGEE
T ss_pred             HHHCCCEEEEEEEEEEEEC--CCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCC
T ss_conf             5879999999998661775--79929999980981489999589799999999964999569999999988988878754


Q ss_pred             EEEEEEEECC
Q ss_conf             9999710168
Q gi|254780791|r  103 IIIESLIPSG  112 (529)
Q Consensus       103 l~v~~i~~~g  112 (529)
                      +.|++++.-+
T Consensus        90 i~v~~i~il~   99 (108)
T 1x54_A           90 VHVEKLEVIQ   99 (108)
T ss_dssp             EEEEEEEEEE
T ss_pred             CCCCEEEECC
T ss_conf             4420046424