HHsearch alignment of GI: 254780791 and MMDB domain: 3bju_A_30-156

>3bju_A (A:30-156) Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=95.50  E-value=0.17  Score=32.91  Aligned_cols=98  Identities=13%  Similarity=0.154  Sum_probs=72.8

Q ss_pred             CCCCHHHHHHHHHHHHHHC-C--CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCC----C--CCCCCC
Q ss_conf             8622999999999997400-1--71899999705435688862799987489479999973521058----6--681459
Q gi|254780791|r   13 PEYSVSELSYHLKHIVESN-L--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI----E--FLPEEG   83 (529)
Q Consensus        13 ~~~svs~l~~~i~~~l~~~-~--~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~----~--~~~~~G   83 (529)
                      +.+|++++........... +  ..|+|.|=|.+.|. ..++=++.+|.|..+.+.|++-......-    .  -.+.-|
T Consensus         4 ~t~~~~~~~~~~~~~~~~~~~~g~~v~v~G~V~~~R~-~g~~~~Fi~lrD~~~~~Q~~~~~~~~~~~~~~~~~~~~l~~g   82 (127)
T 3bju_A            4 VDISLTDFIQKYSHLQPGDHLTDITLKVAGRIHAKRA-SGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRG   82 (127)
T ss_dssp             CCSCHHHHHHHHTTCCTTCBCSSCCEEEEEEEEEEEE-SSSSEEEEEEEETTEEEEEEEEGGGSSCHHHHHHHHHHCCTT
T ss_pred             CCCCHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEC-CCCCEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHCEEEEE
T ss_conf             8772999999741578764258988999999884886-899389999967977999999688678899999974816787


Q ss_pred             CEEEEEEEEEEECCCCEEEEEEEEEEECC
Q ss_conf             88999999667528843799999710168
Q gi|254780791|r   84 IEFLVIGKITTFPGSSKYQIIIESLIPSG  112 (529)
Q Consensus        84 ~~v~~~g~~~~y~~~g~~ql~v~~i~~~g  112 (529)
                      +-|.|.|.+. =.+.|.|.|.++.|+.-+
T Consensus        83 ~~V~v~G~v~-~t~~ge~El~~~~i~il~  110 (127)
T 3bju_A           83 DIIGVQGNPG-KTKKGELSIIPYEITLLS  110 (127)
T ss_dssp             CEEEEEEEEE-ECTTCCEEEEEEEEEEEE
T ss_pred             EEEEEEEEEC-CCCCCCCCCCCCCCHHHC
T ss_conf             5899944552-334664322220000001