HHsearch alignment of GI: 254780791 and MMDB domain: 3e0e_A_

>3e0e_A (A:) Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=93.94  E-value=0.64  Score=27.81  Aligned_cols=72  Identities=18%  Similarity=0.218  Sum_probs=50.7

Q ss_pred             CEEEEEEECCCC---C-CCCCCE--E--EEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEE
Q ss_conf             189999970543---5-688862--7--9998748947999997352105866814598899999966752884379999
Q gi|254780791|r   34 HVCVRGEISGYR---G-IHSSGH--A--YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII  105 (529)
Q Consensus        34 ~~~v~gEis~~~---~-~~~sGH--~--Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v  105 (529)
                      .+.|.|-|....   . ..+.|+  .  -+.|.|+.+.|++++|...+   .+.++.|+-|.+.|.+..|  +|++||.+
T Consensus        13 ~vdi~~~V~~~~~~~~~~~k~g~~~~~~~~~i~D~Tg~i~~t~W~~~~---~~~~~~g~iv~i~g~v~~~--~g~~~l~~   87 (97)
T 3e0e_A           13 SGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNELA---DFEVKKGDIAEVSGYVKQG--YSGLEISV   87 (97)
T ss_dssp             EEEEEEEEEEECCCEEEC----CCEEEEEEEEEETTEEEEEEEEGGGG---GCCCCTTCEEEEEEEEEEC----CEEEEE
T ss_pred             EEEEEEEEEECCCCEEEECCCCCEEEEEEEEEECCCCEEEEEEECCHH---HCCCCCCCEEEEEEEEEEC--CCEEEEEE
T ss_conf             457999999646744788579975389999994599879999999167---4064789999999999952--99599995


Q ss_pred             EEEEE
Q ss_conf             97101
Q gi|254780791|r  106 ESLIP  110 (529)
Q Consensus       106 ~~i~~  110 (529)
                      .....
T Consensus        88 ~~~t~   92 (97)
T 3e0e_A           88 DNIGI   92 (97)
T ss_dssp             EEEEE
T ss_pred             CCCEE
T ss_conf             99439