HHsearch alignment of GI: 254780791 and MMDB domain: 3e0e_A_
>3e0e_A (A:) Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=93.94 E-value=0.64 Score=27.81 Aligned_cols=72 Identities=18% Similarity=0.218 Sum_probs=50.7
Q ss_pred CEEEEEEECCCC---C-CCCCCE--E--EEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEE
Q ss_conf 189999970543---5-688862--7--9998748947999997352105866814598899999966752884379999
Q gi|254780791|r 34 HVCVRGEISGYR---G-IHSSGH--A--YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105 (529)
Q Consensus 34 ~~~v~gEis~~~---~-~~~sGH--~--Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v 105 (529)
.+.|.|-|.... . ..+.|+ . -+.|.|+.+.|++++|...+ .+.++.|+-|.+.|.+..| +|++||.+
T Consensus 13 ~vdi~~~V~~~~~~~~~~~k~g~~~~~~~~~i~D~Tg~i~~t~W~~~~---~~~~~~g~iv~i~g~v~~~--~g~~~l~~ 87 (97)
T 3e0e_A 13 SGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNELA---DFEVKKGDIAEVSGYVKQG--YSGLEISV 87 (97)
T ss_dssp EEEEEEEEEEECCCEEEC----CCEEEEEEEEEETTEEEEEEEEGGGG---GCCCCTTCEEEEEEEEEEC----CEEEEE
T ss_pred EEEEEEEEEECCCCEEEECCCCCEEEEEEEEEECCCCEEEEEEECCHH---HCCCCCCCEEEEEEEEEEC--CCEEEEEE
T ss_conf 457999999646744788579975389999994599879999999167---4064789999999999952--99599995
Q ss_pred EEEEE
Q ss_conf 97101
Q gi|254780791|r 106 ESLIP 110 (529)
Q Consensus 106 ~~i~~ 110 (529)
.....
T Consensus 88 ~~~t~ 92 (97)
T 3e0e_A 88 DNIGI 92 (97)
T ss_dssp EEEEE
T ss_pred CCCEE
T ss_conf 99439