HHsearch results for GI: 254780791 and protein with PDBid: 1o2d_A
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=95.32 E-value=0.12 Score=32.97 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=49.3
Q ss_pred CCEEEEEECCCHH----HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
Q ss_conf 5289998478425----899999986305975899972100111103679999999974100357677758999516888
Q gi|254780791|r 145 PKIIAVITSPTGA----VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220 (529)
Q Consensus 145 p~~i~vits~~~a----~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS 220 (529)
.+|+-|||+.++. .+..+...|.+. .+++.+|. -|.++-....|.++++.+... ++| .||+=||||
T Consensus 40 g~r~liV~~~~~~~~~g~~~~v~~~L~~~-~i~~~vf~-~v~~~p~~~~v~~~~~~~~~~-------~~D-~IvavGGGs 109 (371)
T 1o2d_A 40 GKRALVVTGKSSSKKNGSLDDLKKLLDET-EISYEIFD-EVEENPSFDNVMKAVERYRND-------SFD-FVVGLGGGS 109 (371)
T ss_dssp CSEEEEEEESSGGGTSSHHHHHHHHHHHT-TCEEEEEE-EECSSCBHHHHHHHHHHHTTS-------CCS-EEEEEESHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHHC-CCEEEEEC-CCCCCCCHHHHHHHHHHHHHC-------CCC-EEEEECCCC
T ss_conf 99589997686888735999999999876-98599968-866897999999999999854-------998-899828976
Q ss_pred HHHHHHCCHHHHHHHHH
Q ss_conf 44422007699999997
Q gi|254780791|r 221 IEDLWHFNDEMIVRAIA 237 (529)
Q Consensus 221 ~eDL~~FN~e~laraI~ 237 (529)
.-|+ |++|+
T Consensus 110 ~iD~--------aK~va 118 (371)
T 1o2d_A 110 PMDF--------AKAVA 118 (371)
T ss_dssp HHHH--------HHHHH
T ss_pred CCHH--------HHHHH
T ss_conf 1208--------99999