HHsearch results for GI: 254780791 and protein with PDBid: 2vw9_A
>2vw9_A Single-stranded DNA binding protein; DNA replication, single-stranded DNA, single-stranded DNA binding protein, oligonucleotide/oligosaccharide binding fold, OB-fold; 2.30A {Helicobacter pylori}
Probab=93.48 E-value=0.35 Score=28.82 Aligned_cols=80 Identities=24% Similarity=0.308 Sum_probs=56.5
Q ss_pred CCCEEEEEEECC---CCCCCCCCEEE--EEE------ECCC-------CEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 171899999705---43568886279--998------7489-------47999997352105866814598899999966
Q gi|254780791|r 32 LSHVCVRGEISG---YRGIHSSGHAY--FSL------KDNH-------SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKIT 93 (529)
Q Consensus 32 ~~~~~v~gEis~---~~~~~~sGH~Y--f~l------kd~~-------a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~ 93 (529)
+..|.+.|-|.. ++. -.+|..| |+| ++.. .-+.|++|...+..+.-.++.|+.|.|.|++.
T Consensus 2 ~N~v~l~G~l~~dpe~r~-~~~g~~v~~f~la~~~~~~~~~~~~~~~t~~~~v~~~g~~ae~~~~~l~KG~~V~V~G~l~ 80 (134)
T 2vw9_A 2 FNKVIMVGRLTRNVELKY-LPSGSAAATIGLATSRRFKKQDGTLGEEVCFIDARLFGRTAEIANQYLSKGSSVLIEGRLT 80 (134)
T ss_dssp CCCEEEEEEESSCCEEEE-CTTSCEEEEEEEEEEEEEECSSSCEEEEEEEEEEEEEHHHHHHHHHHCCTTCEEEEEEEEE
T ss_pred CEEEEEEEECCCCCEEEE-CCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEEHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 607999999176978999-7899899999999807623578868745058866786114433234220996999998888
Q ss_pred --EECC-----CCEEEEEEEEEEECC
Q ss_conf --7528-----843799999710168
Q gi|254780791|r 94 --TFPG-----SSKYQIIIESLIPSG 112 (529)
Q Consensus 94 --~y~~-----~g~~ql~v~~i~~~g 112 (529)
.|.. +..+.+.|++|+..+
T Consensus 81 ~~~~~~kdG~~~~~~~i~~~~i~~l~ 106 (134)
T 2vw9_A 81 YESWMDQTGKKNSRHTITADSLQFMD 106 (134)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEEECC
T ss_pred ECEEECCCCCEEEEEEEEEEEEEECC
T ss_conf 55169999989999999998999855