HHSEARCH alignment of GI: 254780791 and SCOP domain: d1se8a_

Alignment
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=91.67  E-value=0.45  Score=25.69  Aligned_cols=81  Identities=16%  Similarity=0.135  Sum_probs=56.6

Q ss_pred             CCCEEEEEEECC---CCCCCCCCEEE--EEE------ECCC-------CEEEEEEECCCCCCCC-CCCCCCCEEEEEEEE
Q ss_conf             171899999705---43568886279--998------7489-------4799999735210586-681459889999996
Q gi|254780791|r   32 LSHVCVRGEISG---YRGIHSSGHAY--FSL------KDNH-------SRIDAIIWKGTLNKIE-FLPEEGIEFLVIGKI   92 (529)
Q Consensus        32 ~~~~~v~gEis~---~~~~~~sGH~Y--f~l------kd~~-------a~i~~~~~~~~~~~~~-~~~~~G~~v~~~g~~   92 (529)
                      +..|-+.|-|.+   ++. ..+|..|  |+|      +|..       .-++|++|...+..+- -.++.|+.|.|.|++
T Consensus         3 mN~v~l~G~l~~dpe~r~-t~~G~~~~~f~lA~~~~~~~~~g~~~~~t~~~~v~~~g~~Ae~~~~~~l~KG~~V~V~G~l   81 (231)
T d1se8a_           3 MNHVYLIGALARDPELRY-TGNGMAVFEATVAGEDRVIGNDGRERNLPWYHRVSILGKPAEWQAERNLKGGDAVVVEGTL   81 (231)
T ss_dssp             EEEEEEEEEESSCCEEEE-CTTSCEEEEEEEEEEEEC-------CEEEEEEEEEEESHHHHHHHHTCCCTTCEEEEEEEE
T ss_pred             CCEEEEEEEECCCCEEEE-CCCCCEEEEEEEEECCCEECCCCCEEEEEEEEEEEEECCHHHHHHHHCCCCCCEEEEEEEE
T ss_conf             449999999776988998-7999889999999789678799879862005668886704655023116899999999997


Q ss_pred             E--EEC-----CCCEEEEEEEEEEECCC
Q ss_conf             6--752-----88437999997101680
Q gi|254780791|r   93 T--TFP-----GSSKYQIIIESLIPSGS  113 (529)
Q Consensus        93 ~--~y~-----~~g~~ql~v~~i~~~g~  113 (529)
                      .  .|.     .+..+.+.+++++.-+-
T Consensus        82 ~~~~~~~~dG~~r~~~~i~a~~v~~l~~  109 (231)
T d1se8a_          82 EYRQWEAPEGGKRSAVNVKALRMEQLGT  109 (231)
T ss_dssp             EEEEEC-----CEEEEEEEEEEEEECSS
T ss_pred             EEEEEECCCCCEEEEEEEEEEEEEECCC
T ss_conf             8503699999899999999999999358


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Single strand DNA-binding domain, SSB
domain: ssDNA-binding protein
species: Deinococcus radiodurans [TaxId: 1299]