HHSEARCH alignment of GI: 254780791 and SCOP domain: d1ujna_

Alignment
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]}
Probab=91.09  E-value=0.5  Score=25.23  Aligned_cols=100  Identities=20%  Similarity=0.241  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEEECCCHHHHHH-HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
Q ss_conf             102652899984784258999-9998630597589997210011110367999999997410035767775899951688
Q gi|254780791|r  141 IPFIPKIIAVITSPTGAVIRD-ILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG  219 (529)
Q Consensus       141 lP~~p~~i~vits~~~a~~~D-~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG  219 (529)
                      +|.+.+++.|||.++-+.+.+ +...+..   .+++.+|.   ||. .+++...-+..+.+.+. ...+.|+ ||+=|||
T Consensus        24 l~~~~~k~~iV~D~~V~~~~~~~~~~l~~---~~i~~i~~---gE~-~Ksl~~~~~i~~~l~~~-~~~r~~~-iiaiGGG   94 (347)
T d1ujna_          24 VPPLAGPAALLFDRRVEGFAQEVAKALGV---RHLLGLPG---GEA-AKSLEVYGKVLSWLAEK-GLPRNAT-LLVVGGG   94 (347)
T ss_dssp             SCCCSSCEEEEEEGGGHHHHHHHHHHHTC---CCEEEECC---SGG-GSSHHHHHHHHHHHHHH-TCCTTCE-EEEEESH
T ss_pred             HHHHHCCEEEEECCCHHHHHHHHHHHCCC---CEEEEECC---CCC-CCCHHHHHHHHHHHHHH-HCCCCCC-EEEEECH
T ss_conf             68875889999894589999999984478---65999789---855-39999999999999973-2035653-3686033


Q ss_pred             CHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
Q ss_conf             8444220076999999974890488520577752589886
Q gi|254780791|r  220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA  259 (529)
Q Consensus       220 S~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~V  259 (529)
                      ++-|+..|     |-++|.-.+|.|.=     -||++=+|
T Consensus        95 ~v~D~agf-----~A~~y~rgi~~i~v-----PTtlla~v  124 (347)
T d1ujna_          95 TLTDLGGF-----VAATYLRGVAYLAF-----PTTTLAIV  124 (347)
T ss_dssp             HHHHHHHH-----HHHHBTTCCEEEEE-----ECSHHHHH
T ss_pred             HHHHHHHH-----HHHHHCCCCCEEEC-----CCHHHHCC
T ss_conf             23357888-----76543178503403-----65143034


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: Dehydroquinate synthase-like
superfamily: Dehydroquinate synthase-like
family: Dehydroquinate synthase, DHQS
domain: Dehydroquinate synthase, DHQS
species: Thermus thermophilus [TaxId: 274]