HHSEARCH alignment of GI: 254780791 and SCOP domain: d2pi2a1

Alignment
>d2pi2a1 b.40.4.3 (A:44-171) Replication protein A 32 KDa subunit (RPA32) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.22  E-value=0.045  Score=34.57  Aligned_cols=110  Identities=15%  Similarity=0.230  Sum_probs=75.4

Q ss_pred             CCCHHHHHHHHH--H--HHHH-CCCCEEEEEEECCCCCCCCCCEEEEEEECCCC-EEEEEEECCCCCC--CCCCCCCCCE
Q ss_conf             622999999999--9--9740-01718999997054356888627999874894-7999997352105--8668145988
Q gi|254780791|r   14 EYSVSELSYHLK--H--IVES-NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-RIDAIIWKGTLNK--IEFLPEEGIE   85 (529)
Q Consensus        14 ~~svs~l~~~i~--~--~l~~-~~~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a-~i~~~~~~~~~~~--~~~~~~~G~~   85 (529)
                      |.|+++|+..-.  .  .+.+ .+..|.+.|-|.+...  .+..+=|+|-|..+ .|.|..|.+....  -.-..++|+-
T Consensus         5 PvtI~ql~~a~~~~~~f~i~g~~v~~V~iVG~V~~i~~--~~t~~~y~idDgTG~~i~v~~w~~~~~~~~~~~~i~~g~y   82 (128)
T d2pi2a1           5 PCTISQLLSATLVDEVFRIGNVEISQVTIVGIIRHAEK--APTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETY   82 (128)
T ss_dssp             ECCHHHHHHCEEETTEEEETTEEESEEEEEEEEEEEEE--CSSEEEEEEECSSSSCEEEEEECC-------CCCCCTTCE
T ss_pred             EEEHHHHHCCCCCCCCEEECCEEEEEEEEEEEEEEEEE--CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCE
T ss_conf             18999986081789978999999999999999989996--5877999998899994899997888877221430568989


Q ss_pred             EEEEEEEEEECCCCEEEEEEEEEEECC-CCHH-HHHHHHHHHHH
Q ss_conf             999999667528843799999710168-0079-99999999976
Q gi|254780791|r   86 FLVIGKITTFPGSSKYQIIIESLIPSG-SGTL-LTALEKRKKKL  127 (529)
Q Consensus        86 v~~~g~~~~y~~~g~~ql~v~~i~~~g-~G~l-~~~~e~lk~~L  127 (529)
                      |-|.|++..|  +|.-++.+..|.|.- .-++ +-.+|-+...|
T Consensus        83 VrV~G~lk~f--~~~~~i~~~~i~~v~d~Nei~~H~Levi~~hL  124 (128)
T d2pi2a1          83 VKVAGHLRSF--QNKKSLVAFKIMPLEDMNEFTTHILEVINAHM  124 (128)
T ss_dssp             EEEEEEEEEE--TTEEEEEEEEEEECSCTHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEEEE--CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf             9999999711--88589999999993796789999999999887


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Single strand DNA-binding domain, SSB
domain: Replication protein A 32 KDa subunit (RPA32) fragment
species: Human (Homo sapiens) [TaxId: 9606]