Query gi|254780791|ref|YP_003065204.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 529
No_of_seqs 228 out of 1609
Neff 8.5
Searched_HMMs 13730
Date Wed Jun 1 06:23:50 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780791.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pi2a1 b.40.4.3 (A:44-171) Re 96.2 0.045 3.3E-06 34.6 10.8 110 14-127 5-124 (128)
2 d1vlja_ e.22.1.2 (A:) NADH-dep 95.6 0.039 2.8E-06 35.1 8.4 75 146-238 35-113 (398)
3 d1o2da_ e.22.1.2 (A:) Alcohol 95.4 0.05 3.6E-06 34.2 8.2 71 144-224 27-101 (359)
4 d1v1qa_ b.40.4.3 (A:) Primosom 95.3 0.14 9.9E-06 30.3 10.6 81 33-114 7-107 (111)
5 d1rrma_ e.22.1.2 (A:) Lactalde 94.6 0.089 6.5E-06 31.9 7.6 75 145-237 30-107 (385)
6 d1oj7a_ e.22.1.2 (A:) Hypothet 93.7 0.065 4.7E-06 33.2 5.5 71 146-225 33-104 (390)
7 d1n9wa1 b.40.4.1 (A:1-93) Aspa 93.0 0.35 2.5E-05 26.6 10.3 71 33-112 14-86 (93)
8 d1jq5a_ e.22.1.2 (A:) Glycerol 92.3 0.22 1.6E-05 28.4 6.6 89 145-252 30-126 (366)
9 d1uiya_ c.14.1.3 (A:) Enoyl-Co 91.9 0.25 1.8E-05 27.9 6.4 77 186-269 27-125 (253)
10 d1se8a_ b.40.4.3 (A:) ssDNA-bi 91.7 0.45 3.2E-05 25.7 7.5 81 32-113 3-109 (231)
11 d1ujna_ e.22.1.1 (A:) Dehydroq 91.1 0.5 3.7E-05 25.2 7.3 100 141-259 24-124 (347)
12 d1gm5a2 b.40.4.9 (A:106-285) R 90.7 0.14 9.9E-06 30.3 4.1 76 34-109 62-139 (180)
13 d3ulla_ b.40.4.3 (A:) ssDNA-bi 90.7 0.45 3.3E-05 25.6 6.7 82 28-110 1-114 (115)
14 d2fw2a1 c.14.1.3 (A:3-260) Chr 90.3 0.38 2.8E-05 26.3 6.1 78 184-269 29-129 (258)
15 d1ue1a_ b.40.4.3 (A:) ssDNA-bi 90.2 0.63 4.6E-05 24.3 7.3 77 34-111 4-107 (118)
16 d1e1oa1 b.40.4.1 (A:11-153) Ly 90.2 0.64 4.7E-05 24.3 10.7 103 3-111 24-135 (143)
17 d1eova1 b.40.4.1 (A:71-204) As 90.1 0.65 4.7E-05 24.2 10.9 86 24-112 26-128 (134)
18 d1c0aa1 b.40.4.1 (A:1-106) Asp 90.0 0.66 4.8E-05 24.2 8.4 78 33-112 16-103 (106)
19 d1wdka4 c.14.1.3 (A:1-310) Fat 89.3 0.54 3.9E-05 25.0 6.2 78 185-269 35-134 (310)
20 d1szoa_ c.14.1.3 (A:) 6-oxo ca 89.0 0.62 4.5E-05 24.4 6.4 78 185-269 40-135 (249)
21 d1dbqa_ c.93.1.1 (A:) Purine r 88.8 0.79 5.7E-05 23.5 10.0 81 146-245 1-85 (282)
22 d2a7ka1 c.14.1.3 (A:1-230) Car 88.3 0.77 5.6E-05 23.6 6.4 81 183-269 25-125 (230)
23 d1jyea_ c.93.1.1 (A:) Lac-repr 88.3 0.84 6.1E-05 23.2 9.8 19 148-166 3-22 (271)
24 d1pjha_ c.14.1.3 (A:) Dienoyl- 88.1 0.44 3.2E-05 25.7 5.1 78 184-268 31-138 (266)
25 d1q52a_ c.14.1.3 (A:) Naphthoa 88.0 0.69 5E-05 24.0 6.0 78 185-269 47-161 (297)
26 d1xjva1 b.40.4.3 (A:6-145) Pro 87.6 0.91 6.6E-05 22.9 10.4 71 35-107 18-94 (140)
27 d1vhqa_ c.23.16.2 (A:) Putativ 87.5 0.13 9.4E-06 30.5 2.0 115 146-263 2-150 (217)
28 d1zl0a2 c.23.16.7 (A:3-169) LD 86.5 1 7.5E-05 22.5 8.5 106 141-259 7-122 (167)
29 d1dcia_ c.14.1.3 (A:) Dienoyl- 86.2 0.76 5.6E-05 23.6 5.4 77 186-269 32-138 (275)
30 d2f6qa1 c.14.1.3 (A:108-352) P 85.5 0.63 4.6E-05 24.4 4.7 77 184-268 29-128 (245)
31 d1hzda_ c.14.1.3 (A:) AUH prot 85.0 0.84 6.1E-05 23.2 5.2 79 184-269 32-130 (266)
32 d1kq3a_ e.22.1.2 (A:) Glycerol 85.0 0.22 1.6E-05 28.4 2.2 85 145-251 30-123 (364)
33 d1ef8a_ c.14.1.3 (A:) Methylma 85.0 0.8 5.8E-05 23.4 5.1 40 230-269 86-127 (261)
34 d1jmca1 b.40.4.3 (A:183-298) R 84.2 0.71 5.2E-05 23.9 4.5 64 31-94 11-82 (116)
35 d1o7ia_ b.40.4.3 (A:) Archaeal 82.4 1.5 0.00011 21.1 9.4 75 32-112 12-97 (115)
36 d1wz8a1 c.14.1.3 (A:2-264) Pro 82.2 1.5 0.00011 21.1 5.5 76 186-269 37-134 (263)
37 d1nzya_ c.14.1.3 (A:) 4-Chloro 82.1 1.5 0.00011 21.0 6.2 77 185-268 30-130 (269)
38 d1jb7a1 b.40.4.3 (A:36-204) Te 81.9 1.5 0.00011 20.9 10.0 72 34-107 16-105 (169)
39 d1qzga_ b.40.4.3 (A:) Protecti 81.8 1.5 0.00011 20.9 9.9 72 34-107 38-121 (170)
40 d1qvca_ b.40.4.3 (A:) ssDNA-bi 81.7 1.5 0.00011 20.9 7.4 68 31-99 4-93 (145)
41 d1b8aa1 b.40.4.1 (A:1-103) Asp 81.5 1.6 0.00011 20.8 9.3 76 33-111 17-98 (103)
42 d1sg4a1 c.14.1.3 (A:2-250) Die 80.6 1.7 0.00012 20.6 6.8 77 186-269 31-127 (249)
43 d1mj3a_ c.14.1.3 (A:) Enoyl-Co 77.7 0.65 4.8E-05 24.2 2.5 77 186-269 35-128 (260)
44 d1no5a_ d.218.1.5 (A:) Hypothe 77.2 2 0.00015 19.8 5.7 63 157-242 7-70 (100)
45 d3e2ba1 d.39.1.1 (A:3-89) Dyne 69.8 2.1 0.00015 19.7 3.5 49 17-71 33-86 (87)
46 d1sg6a_ e.22.1.1 (A:) Dehydroq 68.1 3.1 0.00023 18.1 7.0 91 145-245 33-133 (389)
47 d2gm3a1 c.26.2.4 (A:5-175) Put 66.2 3.4 0.00024 17.9 4.5 69 159-245 85-156 (171)
48 d2ghra1 c.23.16.8 (A:17-297) H 66.1 3.4 0.00025 17.8 4.1 78 144-229 18-101 (281)
49 d1dm9a_ d.66.1.3 (A:) Heat sho 63.5 3.7 0.00027 17.5 4.1 43 457-502 26-68 (104)
50 d1a9xb2 c.23.16.1 (B:1653-1880 62.7 3.8 0.00028 17.4 8.7 83 138-244 32-114 (228)
51 d1l0wa1 b.40.4.1 (A:1-104) Asp 62.3 3.9 0.00028 17.3 8.6 78 33-112 17-101 (104)
52 d1o1ya_ c.23.16.1 (A:) Hypothe 61.8 3.9 0.00029 17.2 5.1 36 209-244 49-88 (230)
53 d1knya2 d.218.1.1 (A:1-125) Ka 61.6 2.8 0.0002 18.6 2.8 47 157-221 14-63 (125)
54 d1nnxa_ b.40.10.1 (A:) Hypothe 59.1 4.3 0.00032 16.9 7.6 69 33-110 37-105 (106)
55 d1js1x1 c.78.1.1 (X:1-163) Tra 59.1 4.3 0.00032 16.9 3.8 106 143-259 34-156 (163)
56 d1pfka_ c.89.1.1 (A:) ATP-depe 58.9 4.4 0.00032 16.8 8.0 109 145-272 2-146 (320)
57 d2f9yb1 c.14.1.4 (B:23-285) Ac 58.6 4.4 0.00032 16.8 6.4 62 182-250 112-179 (263)
58 d1q7ra_ c.23.16.1 (A:) Hypothe 56.1 4.8 0.00035 16.5 6.7 72 145-244 6-81 (202)
59 d2k49a2 d.348.1.1 (A:1-58) Unc 56.0 4.3 0.00031 16.9 3.0 18 49-66 11-28 (58)
60 d1qdlb_ c.23.16.1 (B:) Anthran 56.0 4.8 0.00035 16.5 4.7 42 209-250 46-88 (195)
61 d1vlva1 c.78.1.1 (A:1-152) Orn 55.1 5 0.00036 16.4 6.3 95 145-259 46-144 (152)
62 d1a3xa2 c.1.12.1 (A:1-87,A:189 55.0 5 0.00036 16.4 4.7 52 209-269 156-211 (265)
63 d1tq8a_ c.26.2.4 (A:) Hypothet 54.8 5 0.00036 16.3 4.9 50 182-245 92-143 (147)
64 d1jx6a_ c.93.1.1 (A:) Quorum-s 54.7 5 0.00037 16.3 10.5 87 143-245 38-131 (338)
65 d2csua3 c.23.4.1 (A:291-453) A 54.4 5.1 0.00037 16.3 12.4 120 146-271 4-148 (163)
66 d1fuia2 c.85.1.1 (A:1-355) L-f 54.2 5.1 0.00037 16.3 4.8 95 147-251 8-143 (355)
67 d1byka_ c.93.1.1 (A:) Trehalos 53.8 5.2 0.00038 16.2 7.4 191 9-259 11-213 (255)
68 d1zl0a1 c.8.10.1 (A:170-307) L 53.6 5.2 0.00038 16.2 6.3 66 186-254 53-121 (138)
69 d1f0xa2 d.145.1.1 (A:9-273) D- 52.9 5.3 0.00039 16.1 3.4 15 120-134 116-130 (265)
70 d2bw0a2 c.65.1.1 (A:1-203) 10- 52.9 2.1 0.00015 19.8 0.9 63 146-218 25-87 (203)
71 d1al3a_ c.94.1.1 (A:) Cofactor 52.4 5.1 0.00037 16.3 2.9 91 146-259 8-103 (237)
72 d1eg7a_ c.37.1.10 (A:) Formylt 52.3 5.4 0.00039 16.0 6.0 57 196-252 306-381 (549)
73 d1xrsb1 c.23.6.1 (B:102-261) D 52.2 5.4 0.0004 16.0 6.4 86 172-274 57-148 (160)
74 d2abwa1 c.23.16.1 (A:2-219) Py 51.7 4.4 0.00032 16.8 2.5 72 147-244 4-83 (218)
75 d1wota_ d.218.1.5 (A:) Unnamed 50.9 2.3 0.00017 19.3 0.9 54 159-230 12-66 (98)
76 d1mjha_ c.26.2.4 (A:) "Hypothe 49.7 5.9 0.00043 15.7 5.5 71 158-245 82-154 (160)
77 d3bida1 d.348.1.1 (A:1-56) Unc 49.6 5.9 0.00043 15.7 3.0 18 49-66 9-26 (56)
78 d2k8ea2 d.348.1.1 (A:75-126) U 49.2 6 0.00043 15.6 3.1 19 49-67 4-22 (52)
79 d2f48a1 c.89.1.1 (A:4-553) Pyr 49.1 6 0.00044 15.6 7.6 92 144-245 68-197 (550)
80 d2k7ia1 d.348.1.1 (A:1-62) Unc 48.3 3.2 0.00023 18.0 1.3 18 49-66 10-27 (62)
81 d4pfka_ c.89.1.1 (A:) ATP-depe 47.9 6.2 0.00045 15.5 7.5 37 209-255 94-130 (319)
82 d1u9ca_ c.23.16.2 (A:) GK2698 47.9 6.2 0.00045 15.5 7.6 43 207-251 85-129 (221)
83 d2d00a1 c.149.1.1 (A:6-109) V- 47.7 6.2 0.00045 15.5 4.9 63 185-259 24-94 (104)
84 d2c4va1 c.23.13.1 (A:1-158) Ty 47.7 6.2 0.00045 15.5 8.8 70 159-246 27-101 (158)
85 d1xkya1 c.1.10.1 (A:1-292) Dih 47.5 6.3 0.00046 15.4 8.5 80 154-252 112-192 (292)
86 d1ttza_ c.47.1.1 (A:) Hypothet 45.8 5 0.00036 16.3 2.0 31 209-240 45-75 (75)
87 d1ojxa_ c.1.10.1 (A:) Archaeal 45.4 6.7 0.00049 15.2 8.4 87 159-261 122-217 (251)
88 d1wjja_ b.40.4.3 (A:) Hypothet 44.9 6.8 0.00049 15.1 7.2 79 29-113 23-122 (145)
89 d2k49a1 d.348.1.1 (A:59-110) U 44.5 6.5 0.00047 15.3 2.4 18 49-66 4-21 (52)
90 d2nzug1 c.93.1.1 (G:58-332) Gl 44.4 6.9 0.0005 15.1 10.2 20 9-30 12-31 (275)
91 d1q77a_ c.26.2.4 (A:) Hypothet 43.2 7.1 0.00052 14.9 2.7 43 182-245 94-136 (138)
92 d2nv0a1 c.23.16.1 (A:1-195) Hy 43.0 7.2 0.00052 14.9 5.2 74 146-247 2-78 (195)
93 d2a9pa1 c.23.1.1 (A:2-118) DNA 42.9 7.2 0.00053 14.9 9.4 85 146-255 1-86 (117)
94 d1lw7a2 c.37.1.1 (A:220-411) T 42.8 7.2 0.00053 14.9 4.0 34 141-175 3-36 (192)
95 d1duvg1 c.78.1.1 (G:1-150) Orn 42.7 7.3 0.00053 14.9 9.7 96 142-259 41-142 (150)
96 d1k9vf_ c.23.16.1 (F:) GAT sub 42.4 7.3 0.00053 14.8 6.6 43 207-250 41-88 (200)
97 d1vi6a_ c.23.15.1 (A:) Ribosom 42.4 7.3 0.00053 14.8 2.6 133 113-295 41-173 (193)
98 d1mkza_ c.57.1.1 (A:) MoaB {Es 41.9 7.4 0.00054 14.8 5.9 75 139-223 2-81 (170)
99 d1gqoa_ c.23.13.1 (A:) Type II 41.8 7.5 0.00054 14.8 7.7 69 158-245 26-97 (141)
100 d2gy9i1 d.14.1.1 (I:4-129) Rib 41.6 6.7 0.00049 15.2 2.1 44 189-239 43-86 (126)
101 d2i4ra1 c.149.1.1 (A:4-79) V-t 41.4 7.6 0.00055 14.7 3.6 52 185-248 25-76 (76)
102 d1c0ma1 b.34.7.1 (A:217-269) D 40.9 7.1 0.00052 15.0 2.2 16 458-473 26-42 (53)
103 d2b4aa1 c.23.1.1 (A:2-119) Hyp 40.5 7.8 0.00057 14.6 7.9 84 145-252 2-89 (118)
104 d1xnya1 c.14.1.4 (A:10-267) Pr 40.3 7.8 0.00057 14.6 5.9 70 172-250 90-170 (258)
105 d2a9va1 c.23.16.1 (A:1-196) GM 39.9 7.9 0.00058 14.5 5.4 36 208-244 42-77 (196)
106 d2j6ba1 d.321.1.1 (A:1-109) Af 39.7 6.5 0.00047 15.3 1.8 24 242-265 38-61 (109)
107 d1pvva1 c.78.1.1 (A:1-150) Orn 39.4 8 0.00059 14.5 7.0 97 143-259 43-143 (150)
108 d3lada1 c.3.1.5 (A:1-158,A:278 39.1 6.5 0.00048 15.3 1.7 16 208-226 3-18 (229)
109 d2csua1 c.2.1.8 (A:1-129) Acet 39.1 8.1 0.00059 14.4 5.6 80 143-242 6-90 (129)
110 d1h05a_ c.23.13.1 (A:) Type II 39.0 8.1 0.00059 14.4 7.8 68 159-245 27-97 (144)
111 d2at2a1 c.78.1.1 (A:1-144) Asp 38.5 8.2 0.0006 14.4 2.2 56 187-259 78-136 (144)
112 d1mvoa_ c.23.1.1 (A:) PhoP rec 38.5 8.3 0.0006 14.4 9.6 85 145-254 2-90 (121)
113 d1pkla2 c.1.12.1 (A:1-87,A:187 38.1 8.4 0.00061 14.3 5.1 52 209-269 156-211 (258)
114 d1jmva_ c.26.2.4 (A:) Universa 38.1 8.4 0.00061 14.3 4.7 51 181-245 85-135 (140)
115 d1gpma2 c.23.16.1 (A:3-207) GM 37.8 7 0.00051 15.0 1.7 78 144-244 4-81 (205)
116 d1lcya2 b.47.1.1 (A:6-210) Mit 37.6 8.5 0.00062 14.3 4.5 17 22-38 10-27 (205)
117 d1vk3a2 d.79.4.1 (A:346-507) P 37.4 8.6 0.00062 14.2 4.4 56 186-246 74-132 (162)
118 d1hska1 d.145.1.2 (A:15-208) U 36.8 8.7 0.00063 14.2 2.8 62 19-93 3-68 (194)
119 d1cjya2 c.19.1.2 (A:142-721) C 36.6 4.8 0.00035 16.5 0.7 30 237-267 181-210 (580)
120 d1s3aa1 c.47.1.22 (A:15-99) NA 36.6 8.8 0.00064 14.1 2.4 28 152-179 12-44 (85)
121 d1vl8a_ c.2.1.2 (A:) Gluconate 36.6 8.8 0.00064 14.1 7.4 91 122-235 20-110 (251)
122 d2hzba1 c.143.1.1 (A:2-312) Hy 36.3 8.8 0.00064 14.1 5.9 108 138-261 121-235 (311)
123 d2hy1a1 d.159.1.11 (A:10-265) 36.1 8.9 0.00065 14.1 7.2 67 186-258 28-98 (256)
124 d2uubb1 c.23.15.1 (B:7-240) Ri 36.1 8.9 0.00065 14.1 2.9 64 208-295 152-215 (234)
125 d1n57a_ c.23.16.2 (A:) HSP31 ( 35.5 9.1 0.00066 14.0 3.7 68 207-276 140-214 (279)
126 d7reqa2 c.23.6.1 (A:561-728) M 35.1 9.2 0.00067 14.0 9.0 131 117-274 17-155 (168)
127 d2dria_ c.93.1.1 (A:) D-ribose 34.4 9.4 0.00068 13.9 9.3 29 63-91 57-90 (271)
128 d2vqei1 d.14.1.1 (I:2-128) Rib 33.9 9.5 0.00069 13.8 2.1 44 189-239 44-87 (127)
129 d1hl2a_ c.1.10.1 (A:) N-acetyl 33.7 9.6 0.0007 13.8 7.6 94 155-269 112-207 (295)
130 d2qfra2 d.159.1.1 (A:121-432) 33.6 9.6 0.0007 13.8 5.2 20 233-253 66-86 (312)
131 d2p10a1 c.1.12.9 (A:8-204) Unc 33.6 9.6 0.0007 13.8 4.9 52 208-259 40-110 (197)
132 d1r59o2 c.55.1.4 (O:257-491) G 33.6 9.7 0.0007 13.8 3.2 36 208-250 147-182 (235)
133 d2ffea1 c.143.1.1 (A:1-309) LP 33.4 9.7 0.00071 13.7 6.1 114 114-245 107-220 (309)
134 d1jfla1 c.78.2.1 (A:1-115) Asp 33.4 9.7 0.00071 13.7 7.1 83 146-245 2-102 (115)
135 d1miob_ c.92.2.3 (B:) Nitrogen 33.4 9.7 0.00071 13.7 8.5 92 145-244 96-198 (457)
136 d1uuya_ c.57.1.1 (A:) Plant CN 33.2 9.8 0.00071 13.7 8.7 66 146-221 4-81 (161)
137 d1ylqa1 d.218.1.5 (A:1-90) Put 33.0 9.8 0.00072 13.7 4.7 44 159-219 1-45 (90)
138 d2oq0a1 b.40.16.1 (A:115-202) 32.9 9.9 0.00072 13.7 7.0 37 50-89 28-64 (88)
139 d2a21a1 c.1.10.4 (A:1002-1264) 32.8 9.9 0.00072 13.7 6.3 62 185-254 128-189 (263)
140 d1kz1a_ c.16.1.1 (A:) Lumazine 32.6 10 0.00073 13.6 9.1 90 145-248 9-114 (150)
141 d1znwa1 c.37.1.1 (A:20-201) Gu 32.3 10 0.00073 13.6 2.0 28 147-174 3-31 (182)
142 d1w25a1 c.23.1.1 (A:2-140) Res 32.1 10 0.00074 13.6 10.0 87 147-258 3-93 (139)
143 d1vmaa2 c.37.1.10 (A:82-294) G 31.8 10 0.00075 13.5 7.1 48 179-237 164-211 (213)
144 d1feca1 c.3.1.5 (A:1-169,A:287 31.6 8.3 0.00061 14.3 1.3 13 207-221 2-14 (240)
145 d1rvv1_ c.16.1.1 (1:) Lumazine 31.4 10 0.00075 13.5 10.2 88 145-248 12-116 (154)
146 d3d03a1 d.159.1.11 (A:1-271) G 31.3 10 0.00076 13.5 6.6 68 184-259 22-91 (271)
147 d2hq2a1 e.62.1.1 (A:1-337) Hem 31.3 10 0.00076 13.5 3.0 82 36-130 74-158 (337)
148 d1i6aa_ c.94.1.1 (A:) Hydrogen 30.7 11 0.00077 13.4 6.0 91 145-259 6-101 (212)
149 d1dcfa_ c.23.1.2 (A:) Receiver 30.7 11 0.00077 13.4 7.9 85 145-257 7-100 (134)
150 d1o5ka_ c.1.10.1 (A:) Dihydrod 30.6 11 0.00077 13.4 7.6 80 154-248 110-192 (295)
151 d1f0ka_ c.87.1.2 (A:) Peptidog 30.5 11 0.00078 13.4 3.4 41 209-264 249-295 (351)
152 d1peya_ c.23.1.1 (A:) Sporulat 30.4 11 0.00078 13.4 9.7 84 146-256 2-89 (119)
153 d1pg5a1 c.78.1.1 (A:1-146) Asp 30.1 11 0.00079 13.3 5.0 94 143-259 36-138 (146)
154 d1ko7a1 c.98.2.1 (A:1-129) HPr 30.0 11 0.00079 13.3 3.4 53 210-263 48-104 (129)
155 d1h5qa_ c.2.1.2 (A:) Mannitol 29.7 11 0.0008 13.3 6.0 74 151-232 38-111 (260)
156 d1ixca2 c.94.1.1 (A:90-294) Ly 29.3 11 0.00081 13.2 4.0 45 146-196 4-49 (205)
157 d2gy9b1 c.23.15.1 (B:8-225) Ri 29.2 11 0.00081 13.2 3.4 44 207-259 148-191 (218)
158 d2btya1 c.73.1.2 (A:1-282) N-a 29.2 11 0.00081 13.2 3.1 29 227-255 148-176 (282)
159 d1mo9a1 c.3.1.5 (A:2-192,A:314 29.2 9.6 0.0007 13.8 1.3 11 208-220 42-52 (261)
160 d1vrda1 c.1.5.1 (A:1-85,A:213- 28.8 11 0.00082 13.2 6.9 94 148-262 113-220 (330)
161 d1vrga1 c.14.1.4 (A:1-251) Pro 28.6 11 0.00083 13.1 6.1 28 209-240 180-207 (251)
162 d1xeaa1 c.2.1.3 (A:2-122,A:267 28.5 11 0.00083 13.1 4.5 30 208-245 62-91 (167)
163 d1yzfa1 c.23.10.5 (A:1-195) Li 28.0 12 0.00085 13.0 6.2 92 146-247 2-113 (195)
164 d1uqra_ c.23.13.1 (A:) Type II 27.9 12 0.00085 13.0 6.7 81 146-245 2-98 (146)
165 d1aoga1 c.3.1.5 (A:3-169,A:287 27.9 10 0.00076 13.5 1.3 12 208-221 3-14 (238)
166 d1ro0a_ d.264.1.2 (A:) Bifunct 27.6 12 0.00086 13.0 1.8 46 49-96 102-149 (210)
167 d1h9ra1 b.40.6.2 (A:123-199) C 27.5 12 0.00086 13.0 4.5 55 36-92 8-62 (77)
168 d1ytla1 c.31.1.6 (A:17-174) Ac 27.3 12 0.00087 13.0 4.2 19 230-248 35-53 (158)
169 d1gtza_ c.23.13.1 (A:) Type II 27.2 12 0.00087 12.9 7.6 68 159-245 32-103 (149)
170 d1qvwa_ c.23.16.2 (A:) Hypothe 27.1 12 0.00087 12.9 4.3 66 207-275 96-172 (236)
171 d2pjua1 c.92.3.1 (A:11-196) Pr 26.7 12 0.00089 12.9 6.1 61 144-223 93-154 (186)
172 d2j85a1 d.321.1.1 (A:2-116) Hy 26.5 12 0.00089 12.8 1.9 15 238-252 39-53 (115)
173 d1wbha1 c.1.10.1 (A:1-213) KDP 26.1 12 0.00091 12.8 4.4 87 146-251 16-119 (213)
174 d2g50a2 c.1.12.1 (A:12-115,A:2 25.5 13 0.00092 12.7 7.0 86 146-247 124-214 (282)
175 d1mb3a_ c.23.1.1 (A:) Cell div 25.5 13 0.00092 12.7 8.8 83 146-253 2-88 (123)
176 d2z3va1 c.26.2.4 (A:2-136) Hyp 25.4 13 0.00093 12.7 4.7 51 182-245 82-134 (135)
177 d2masa_ c.70.1.1 (A:) Inosine- 25.3 13 0.00093 12.7 6.7 82 155-248 101-189 (313)
178 d2ayxa1 c.23.1.1 (A:817-949) S 25.0 13 0.00094 12.6 7.3 82 146-252 9-94 (133)
179 d1jvna2 c.23.16.1 (A:-3-229) G 24.8 13 0.00095 12.6 5.2 16 256-271 209-224 (232)
180 d1pvna1 c.1.5.1 (A:2-99,A:231- 24.2 13 0.00097 12.5 3.8 58 148-221 125-186 (362)
181 d1ywua1 b.45.2.1 (A:1-125) Hyp 23.9 13 0.00098 12.5 6.8 68 33-113 25-95 (125)
182 d1dxha1 c.78.1.1 (A:1-150) Orn 23.8 14 0.00099 12.5 10.7 99 142-259 42-143 (150)
183 d1ebda1 c.3.1.5 (A:7-154,A:272 23.8 14 0.00099 12.5 1.3 11 208-220 3-13 (223)
184 d8abpa_ c.93.1.1 (A:) L-arabin 23.6 14 0.00099 12.4 10.3 26 225-250 201-231 (305)
185 d1gtea3 c.3.1.1 (A:288-440) Di 23.3 14 0.001 12.4 4.5 42 133-177 34-75 (153)
186 d2vgba1 b.58.1.1 (A:160-261) P 23.3 14 0.001 12.4 2.9 25 476-502 49-73 (102)
187 d1di0a_ c.16.1.1 (A:) Lumazine 23.2 14 0.001 12.4 9.0 89 146-248 3-106 (148)
188 d1kgda_ c.37.1.1 (A:) Guanylat 23.1 14 0.001 12.3 2.3 26 146-171 3-28 (178)
189 d1e0ta1 b.58.1.1 (A:70-167) Py 22.9 14 0.001 12.3 2.5 25 476-502 45-69 (98)
190 d1nqua_ c.16.1.1 (A:) Lumazine 22.8 14 0.001 12.3 9.8 90 145-248 12-116 (154)
191 d1ejba_ c.16.1.1 (A:) Lumazine 22.7 14 0.001 12.3 8.5 98 145-248 16-125 (168)
192 d1ab4a_ e.11.1.1 (A:) DNA Gyra 22.7 8.5 0.00062 14.3 0.0 79 76-164 114-205 (493)
193 d3grsa1 c.3.1.5 (A:18-165,A:29 22.7 14 0.001 12.3 1.5 11 208-220 3-13 (221)
194 d1l1ja_ b.47.1.1 (A:) Protease 22.5 14 0.001 12.3 1.1 11 81-91 129-139 (228)
195 d2djia1 c.31.1.3 (A:187-363) P 22.5 14 0.001 12.3 4.8 18 232-251 79-96 (177)
196 d1zesa1 c.23.1.1 (A:3-123) Pho 22.3 14 0.001 12.2 8.6 84 146-256 1-90 (121)
197 d2hmfa1 c.73.1.3 (A:2-303) Asp 22.1 14 0.0011 12.2 7.6 40 215-254 5-48 (302)
198 d1u0sy_ c.23.1.1 (Y:) CheY pro 22.1 14 0.0011 12.2 9.5 87 146-258 2-92 (118)
199 d1qzza2 c.66.1.12 (A:102-357) 21.9 14 0.001 12.4 1.0 80 146-242 83-178 (256)
200 d1edqa1 b.1.18.2 (A:24-132) Ch 21.8 15 0.0011 12.1 4.8 48 64-112 41-96 (109)
201 d1qupa2 d.58.17.1 (A:2-73) Cop 21.7 15 0.0011 12.1 1.8 45 159-213 20-69 (72)
202 d1xg5a_ c.2.1.2 (A:) Putative 21.7 15 0.0011 12.1 8.6 95 112-235 21-116 (257)
203 d2ez9a1 c.31.1.3 (A:183-365) P 21.5 15 0.0011 12.1 5.0 84 154-253 15-107 (183)
204 d2csua2 c.23.4.1 (A:130-290) A 21.4 15 0.0011 12.1 8.2 92 145-253 20-113 (161)
205 d1vr6a1 c.1.10.4 (A:1-338) 3-d 21.4 15 0.0011 12.1 4.3 166 62-250 58-273 (338)
206 d1p9ra_ c.37.1.11 (A:) Extrace 21.1 15 0.0011 12.0 9.1 144 89-257 109-269 (401)
207 d2ix0a1 b.40.4.5 (A:83-172) Ex 20.7 15 0.0011 12.0 2.3 58 52-112 13-70 (90)
208 d2a7sa1 c.14.1.4 (A:20-277) Pr 20.5 15 0.0011 12.0 7.9 26 209-238 183-208 (258)
209 d1xxxa1 c.1.10.1 (A:5-300) Dih 20.5 15 0.0011 12.0 8.5 84 154-260 116-200 (296)
210 d1tjya_ c.93.1.1 (A:) AI-2 rec 20.5 15 0.0011 11.9 8.4 90 146-252 4-97 (316)
211 d2btoa1 c.32.1.1 (A:3-246) Tub 20.3 16 0.0011 11.9 5.5 71 147-235 134-212 (244)
212 d1wfya_ d.15.1.5 (A:) Regulato 20.3 5.2 0.00038 16.2 -1.5 52 138-190 20-71 (104)
213 d1j6qa_ b.40.9.1 (A:) Heme cha 20.1 16 0.0011 11.9 8.2 66 33-108 27-96 (100)
214 d1a04a2 c.23.1.1 (A:5-142) Nit 20.1 16 0.0011 11.9 8.0 82 145-250 2-88 (138)
No 1
>d2pi2a1 b.40.4.3 (A:44-171) Replication protein A 32 KDa subunit (RPA32) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.22 E-value=0.045 Score=34.57 Aligned_cols=110 Identities=15% Similarity=0.230 Sum_probs=75.4
Q ss_pred CCCHHHHHHHHH--H--HHHH-CCCCEEEEEEECCCCCCCCCCEEEEEEECCCC-EEEEEEECCCCCC--CCCCCCCCCE
Q ss_conf 622999999999--9--9740-01718999997054356888627999874894-7999997352105--8668145988
Q gi|254780791|r 14 EYSVSELSYHLK--H--IVES-NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-RIDAIIWKGTLNK--IEFLPEEGIE 85 (529)
Q Consensus 14 ~~svs~l~~~i~--~--~l~~-~~~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a-~i~~~~~~~~~~~--~~~~~~~G~~ 85 (529)
|.|+++|+..-. . .+.+ .+..|.+.|-|.+... .+..+=|+|-|..+ .|.|..|.+.... -.-..++|+-
T Consensus 5 PvtI~ql~~a~~~~~~f~i~g~~v~~V~iVG~V~~i~~--~~t~~~y~idDgTG~~i~v~~w~~~~~~~~~~~~i~~g~y 82 (128)
T d2pi2a1 5 PCTISQLLSATLVDEVFRIGNVEISQVTIVGIIRHAEK--APTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETY 82 (128)
T ss_dssp ECCHHHHHHCEEETTEEEETTEEESEEEEEEEEEEEEE--CSSEEEEEEECSSSSCEEEEEECC-------CCCCCTTCE
T ss_pred EEEHHHHHCCCCCCCCEEECCEEEEEEEEEEEEEEEEE--CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCE
T ss_conf 18999986081789978999999999999999989996--5877999998899994899997888877221430568989
Q ss_pred EEEEEEEEEECCCCEEEEEEEEEEECC-CCHH-HHHHHHHHHHH
Q ss_conf 999999667528843799999710168-0079-99999999976
Q gi|254780791|r 86 FLVIGKITTFPGSSKYQIIIESLIPSG-SGTL-LTALEKRKKKL 127 (529)
Q Consensus 86 v~~~g~~~~y~~~g~~ql~v~~i~~~g-~G~l-~~~~e~lk~~L 127 (529)
|-|.|++..| +|.-++.+..|.|.- .-++ +-.+|-+...|
T Consensus 83 VrV~G~lk~f--~~~~~i~~~~i~~v~d~Nei~~H~Levi~~hL 124 (128)
T d2pi2a1 83 VKVAGHLRSF--QNKKSLVAFKIMPLEDMNEFTTHILEVINAHM 124 (128)
T ss_dssp EEEEEEEEEE--TTEEEEEEEEEEECSCTHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEE--CCEEEEEEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 9999999711--88589999999993796789999999999887
No 2
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=95.65 E-value=0.039 Score=35.13 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=51.3
Q ss_pred CEEEEEECCCH---HH-HHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 28999847842---58-999999863059758999721001111036799999999741003576777589995168884
Q gi|254780791|r 146 KIIAVITSPTG---AV-IRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 146 ~~i~vits~~~---a~-~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
+|+.|||++++ ++ +..+...|.+ ..+++.+| .-|.++-....|.++++.+...+ +| .||+=||||.
T Consensus 35 ~rvliVt~~~~~~~~g~~~~l~~~L~~-~gi~~~~f-~~v~~~pt~~~v~~~~~~~~~~~-------~D-~IIavGGGs~ 104 (398)
T d1vlja_ 35 RKVLFLYGGGSIKKNGVYDQVVDSLKK-HGIEWVEV-SGVKPNPVLSKVHEAVEVAKKEK-------VE-AVLGVGGGSV 104 (398)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHH-TTCEEEEE-CCCCSSCBHHHHHHHHHHHHHTT-------CS-EEEEEESHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHH-CCCEEEEE-CCCCCCCCHHHHHHHHHHCCCCC-------CC-EEEECCCCCH
T ss_conf 848999897478773199999999986-59919998-67159989899998764114566-------76-6884488631
Q ss_pred HHHHHCCHHHHHHHHHH
Q ss_conf 44220076999999974
Q gi|254780791|r 222 EDLWHFNDEMIVRAIAN 238 (529)
Q Consensus 222 eDL~~FN~e~laraI~~ 238 (529)
-|. |++|+.
T Consensus 105 iD~--------aK~ia~ 113 (398)
T d1vlja_ 105 VDS--------AKAVAA 113 (398)
T ss_dssp HHH--------HHHHHH
T ss_pred HHH--------HHHHHH
T ss_conf 127--------888898
No 3
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=95.38 E-value=0.05 Score=34.19 Aligned_cols=71 Identities=20% Similarity=0.263 Sum_probs=47.5
Q ss_pred CCCEEEEEECCCHH---HH-HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
Q ss_conf 65289998478425---89-999998630597589997210011110367999999997410035767775899951688
Q gi|254780791|r 144 IPKIIAVITSPTGA---VI-RDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 (529)
Q Consensus 144 ~p~~i~vits~~~a---~~-~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG 219 (529)
+.+|+.|||+.++. ++ ..+...|.+. .+.+.+| .-|.++-....+.++++.+... ++| .||+=|||
T Consensus 27 ~g~k~liV~~~~~~~~~g~~~~v~~~L~~~-~i~~~~f-~~v~~~p~~~~v~~~~~~~~~~-------~~D-~IIavGGG 96 (359)
T d1o2da_ 27 LGKRALVVTGKSSSKKNGSLDDLKKLLDET-EISYEIF-DEVEENPSFDNVMKAVERYRND-------SFD-FVVGLGGG 96 (359)
T ss_dssp TCSEEEEEEESSGGGTSSHHHHHHHHHHHT-TCEEEEE-EEECSSCBHHHHHHHHHHHTTS-------CCS-EEEEEESH
T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHHC-CCEEEEE-CCCCCCCCHHHHHHHHHHCCCC-------CCC-EEEECCCC
T ss_conf 599589998586888740999999999876-9849997-5746897989998764200135-------775-68851664
Q ss_pred CHHHH
Q ss_conf 84442
Q gi|254780791|r 220 SIEDL 224 (529)
Q Consensus 220 S~eDL 224 (529)
|.-|.
T Consensus 97 s~iD~ 101 (359)
T d1o2da_ 97 SPMDF 101 (359)
T ss_dssp HHHHH
T ss_pred CCHHH
T ss_conf 20018
No 4
>d1v1qa_ b.40.4.3 (A:) Primosomal replication protein N, PriB {Escherichia coli [TaxId: 562]}
Probab=95.28 E-value=0.14 Score=30.28 Aligned_cols=81 Identities=21% Similarity=0.216 Sum_probs=58.2
Q ss_pred CCEEEEEEEC---CCCCCCCCC--EEEEEEE------CCC------CEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEE
Q ss_conf 7189999970---543568886--2799987------489------4799999735210586681459889999996675
Q gi|254780791|r 33 SHVCVRGEIS---GYRGIHSSG--HAYFSLK------DNH------SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTF 95 (529)
Q Consensus 33 ~~~~v~gEis---~~~~~~~sG--H~Yf~lk------d~~------a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y 95 (529)
..|-+.|.|. .++.. .+| .+-|+|. +.+ -.++|++|...+..+.-.++.|++|.|.|++...
T Consensus 7 N~v~L~G~l~~dpelr~T-~~G~~v~~f~la~~~~~~e~~~~r~~~~~i~vv~~g~~Ae~~~~~l~kG~~v~v~G~L~~~ 85 (111)
T d1v1qa_ 7 NRLVLSGTVCRAPLRKVS-PSGIPHCQFVLEHRSVQEEAGFHRQAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCH 85 (111)
T ss_dssp EEEEEEEEEEEEEEEEEC-TTCCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESTGGGGGGTTCCTTCEEEEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEC-CCCCEEEEEEEEECCEEECCCCEEEEEEEEEEEEECHHHHHHHHHHCCCCEEEEEEEEEEE
T ss_conf 799999996688646788-9997899999981307731665078889997899689999999872589999999998770
Q ss_pred --C-CCCEEEEEEEEEEECCCC
Q ss_conf --2-884379999971016800
Q gi|254780791|r 96 --P-GSSKYQIIIESLIPSGSG 114 (529)
Q Consensus 96 --~-~~g~~ql~v~~i~~~g~G 114 (529)
. ..+++.|.++.|+.-+-|
T Consensus 86 ~~~~~~~r~v~~a~~ie~l~s~ 107 (111)
T d1v1qa_ 86 KAKNGLSKMVLHAEQIELIDSV 107 (111)
T ss_dssp CTTTTSCEEEEEEEEEEETTSC
T ss_pred CCCCCCCEEEEEEEEEEEECCC
T ss_conf 2628997799999999995177
No 5
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=94.58 E-value=0.089 Score=31.94 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=52.7
Q ss_pred CCEEEEEECCCHH---HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 5289998478425---8999999863059758999721001111036799999999741003576777589995168884
Q gi|254780791|r 145 PKIIAVITSPTGA---VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 145 p~~i~vits~~~a---~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
.+++-|||+++-. .+..+...+.+. .+++.+| .-|.++-...+|.++++.+...+ +|+ ||+=||||.
T Consensus 30 ~k~~Livt~~~~~~~g~~~~v~~~L~~~-gi~~~vf-~~v~~~p~~~~v~~~~~~~~~~~-------~D~-IiaiGGGS~ 99 (385)
T d1rrma_ 30 YQKALIVTDKTLVQCGVVAKVTDKMDAA-GLAWAIY-DGVVPNPTITVVKEGLGVFQNSG-------ADY-LIAIGGGSP 99 (385)
T ss_dssp CCEEEEECBHHHHHTTHHHHHHHHHHHT-TCEEEEE-CBCCSSCBHHHHHHHHHHHHHHT-------CSE-EEEEESHHH
T ss_pred CCEEEEEECCCHHHCCHHHHHHHHHHHC-CCEEEEE-CCCCCCCCHHHHHHHHHHHHCCC-------CCE-EEECCCCCH
T ss_conf 9979999896556580899999999875-9859998-68269979899998865430358-------888-986698842
Q ss_pred HHHHHCCHHHHHHHHH
Q ss_conf 4422007699999997
Q gi|254780791|r 222 EDLWHFNDEMIVRAIA 237 (529)
Q Consensus 222 eDL~~FN~e~laraI~ 237 (529)
-|. |++|+
T Consensus 100 iD~--------aK~ia 107 (385)
T d1rrma_ 100 QDT--------CKAIG 107 (385)
T ss_dssp HHH--------HHHHH
T ss_pred HHH--------HHHHH
T ss_conf 269--------99999
No 6
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=93.73 E-value=0.065 Score=33.18 Aligned_cols=71 Identities=18% Similarity=0.244 Sum_probs=43.6
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
Q ss_conf 2899984784258999999863059-758999721001111036799999999741003576777589995168884442
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~-p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL 224 (529)
+|+.|||++.+..--.++..+.... ..++.+|. -|.++-....+.++.+.+...+ +| .||+=||||.-|.
T Consensus 33 ~~vliV~~~~~~~~~g~~~~v~~~L~~~~~~~f~-~v~~~p~~~~v~~~~~~~~~~~-------~D-~IIavGGGs~iD~ 103 (390)
T d1oj7a_ 33 ARVLITYGGGSVKKTGVLDQVLDALKGMDVLEFG-GIEPNPAYETLMNAVKLVREQK-------VT-FLLAVGGGSVLDG 103 (390)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTTTSEEEEEC-CCCSSCBHHHHHHHHHHHHHHT-------CC-EEEEEESHHHHHH
T ss_pred CCEEEEECCCHHHHCCHHHHHHHHCCCCCEEEEE-CCCCCCCHHHHHHHHHHHHHCC-------CC-EEEECCCCCCCCH
T ss_conf 9889998971687743999999971899479992-8237999999999999976337-------87-7985478854408
Q ss_pred H
Q ss_conf 2
Q gi|254780791|r 225 W 225 (529)
Q Consensus 225 ~ 225 (529)
.
T Consensus 104 a 104 (390)
T d1oj7a_ 104 T 104 (390)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 7
>d1n9wa1 b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]}
Probab=93.01 E-value=0.35 Score=26.64 Aligned_cols=71 Identities=13% Similarity=0.081 Sum_probs=56.0
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCC--CEEEEEEEEEEE
Q ss_conf 718999997054356888627999874894799999735210586681459889999996675288--437999997101
Q gi|254780791|r 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGS--SKYQIIIESLIP 110 (529)
Q Consensus 33 ~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~--g~~ql~v~~i~~ 110 (529)
..|+|.|=|.+.|. .++=.+++|.|..+.+.|++-.. -.+..|.-|.+.|.+. ..|+ |.+.+.++.++.
T Consensus 14 ~~V~v~GwV~~~R~--~gk~~Fi~LrD~sg~iQ~v~~~~------~~~~~e~~v~v~G~v~-~~~~~~~~~Ei~v~~i~i 84 (93)
T d1n9wa1 14 QEVELLGFLHWRRD--LGRIQFLLLRDRSGVVQVVTGGL------KLPLPESALRVRGLVV-ENAKAPGGLEVQAKEVEV 84 (93)
T ss_dssp SEEEEEEEEEEEEE--CSSEEEEEEEETTEEEEEEEESC------CCCCTTCEEEEEEEEE-ECTTSTTSEEEEEEEEEE
T ss_pred CEEEEEEEEEEEEE--CCCCEEEEEECCCCCCEEEECCC------CCCCCCEEEEEEEEEE-ECCCCCCCEEEEEEEEEE
T ss_conf 99999899993782--79809999983985243784244------3355431999999999-899999889999809999
Q ss_pred CC
Q ss_conf 68
Q gi|254780791|r 111 SG 112 (529)
Q Consensus 111 ~g 112 (529)
-|
T Consensus 85 l~ 86 (93)
T d1n9wa1 85 LS 86 (93)
T ss_dssp EE
T ss_pred EE
T ss_conf 85
No 8
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=92.34 E-value=0.22 Score=28.38 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=51.9
Q ss_pred CCEEEEEECCCHH--HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHH
Q ss_conf 5289998478425--89999998630597589997210011110367999999997410035767775899951688844
Q gi|254780791|r 145 PKIIAVITSPTGA--VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 (529)
Q Consensus 145 p~~i~vits~~~a--~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~e 222 (529)
-+|+-|||.+... +..++...+.... +.+. ...+.|+-....+-++.+.+... ++| +||+=||||.-
T Consensus 30 g~r~lvvtd~~~~~~~~~~l~~~L~~~~-i~~~--~~~~~~~p~~~~v~~~~~~~~~~-------~~D-~IiavGGGs~i 98 (366)
T d1jq5a_ 30 GNKTVVIADEIVWKIAGHTIVNELKKGN-IAAE--EVVFSGEASRNEVERIANIARKA-------EAA-IVIGVGGGKTL 98 (366)
T ss_dssp CSEEEEEECHHHHHHTHHHHHHHHHTTT-CEEE--EEECCSSCBHHHHHHHHHHHHHT-------TCS-EEEEEESHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHCC-CEEE--EEEECCCCCHHHHHHHHHHHHCC-------CCC-EEEEECCCCCC
T ss_conf 9948999898578999999999998779-9699--99818999999999999986203-------886-89981688644
Q ss_pred HHHHCCHHHHHHHHHH-CCCE-----EEEEECCCCC
Q ss_conf 4220076999999974-8904-----8852057775
Q gi|254780791|r 223 DLWHFNDEMIVRAIAN-SSIP-----IISAIGHETD 252 (529)
Q Consensus 223 DL~~FN~e~laraI~~-~~iP-----VisgIGHE~D 252 (529)
|.. ++|+. .++| ...|.|=|+.
T Consensus 99 D~a--------K~iA~~~~~p~i~IPTT~gtgse~t 126 (366)
T d1jq5a_ 99 DTA--------KAVADELDAYIVIVPTAASTDAPTS 126 (366)
T ss_dssp HHH--------HHHHHHHTCEEEEEESSCCSSCTTC
T ss_pred CCH--------HEEEECCCCEEEEHHHHHHHHHCCC
T ss_conf 220--------0012046653540243443432001
No 9
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}
Probab=91.91 E-value=0.25 Score=27.95 Aligned_cols=77 Identities=16% Similarity=0.162 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC-------CCCHHHHH-------------HCCHHHHHHHHHHCCCEEEE
Q ss_conf 03679999999974100357677758999516-------88844422-------------00769999999748904885
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARG-------GGSIEDLW-------------HFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RG-------GGS~eDL~-------------~FN~e~laraI~~~~iPVis 245 (529)
-..++..+++.++... .+.+||| +| ||.+.++. ......+..++..||.|||+
T Consensus 27 ~~~el~~~l~~~~~d~------~v~~vvl-~g~g~~f~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIa 99 (253)
T d1uiya_ 27 MALSLLQALDDLEADP------GVRAVVL-TGRGKAFSAGADLAFLERVTELGAEENYRHSLSLMRLFHRVYTYPKPTVA 99 (253)
T ss_dssp HHHHHHHHHHHHHHCT------TCCEEEE-EESSSCSBCCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHHCC------CCEEEEE-ECCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf 9999999999997299------9649999-66643222111067763023457531100013332145687618978899
Q ss_pred EE-CCCC-CCHHHHHHHCCCCCCCHH
Q ss_conf 20-5777-525898864123777214
Q gi|254780791|r 246 AI-GHET-DWTLADYAADLRAPTPTG 269 (529)
Q Consensus 246 gI-GHE~-D~Tl~D~VAD~Ra~TPTa 269 (529)
+| ||=. ==.-+=+.+|.|..++.+
T Consensus 100 av~G~a~GgG~~lal~~D~ria~~~a 125 (253)
T d1uiya_ 100 AVNGPAVAGGAGLALACDLVVMDEEA 125 (253)
T ss_dssp EECSCEETHHHHHHHTSSEEEEETTC
T ss_pred EECEEEEHHHHHHHHHHHHHHHHHHH
T ss_conf 73728732627987620165664666
No 10
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=91.67 E-value=0.45 Score=25.69 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=56.6
Q ss_pred CCCEEEEEEECC---CCCCCCCCEEE--EEE------ECCC-------CEEEEEEECCCCCCCC-CCCCCCCEEEEEEEE
Q ss_conf 171899999705---43568886279--998------7489-------4799999735210586-681459889999996
Q gi|254780791|r 32 LSHVCVRGEISG---YRGIHSSGHAY--FSL------KDNH-------SRIDAIIWKGTLNKIE-FLPEEGIEFLVIGKI 92 (529)
Q Consensus 32 ~~~~~v~gEis~---~~~~~~sGH~Y--f~l------kd~~-------a~i~~~~~~~~~~~~~-~~~~~G~~v~~~g~~ 92 (529)
+..|-+.|-|.+ ++. ..+|..| |+| +|.. .-++|++|...+..+- -.++.|+.|.|.|++
T Consensus 3 mN~v~l~G~l~~dpe~r~-t~~G~~~~~f~lA~~~~~~~~~g~~~~~t~~~~v~~~g~~Ae~~~~~~l~KG~~V~V~G~l 81 (231)
T d1se8a_ 3 MNHVYLIGALARDPELRY-TGNGMAVFEATVAGEDRVIGNDGRERNLPWYHRVSILGKPAEWQAERNLKGGDAVVVEGTL 81 (231)
T ss_dssp EEEEEEEEEESSCCEEEE-CTTSCEEEEEEEEEEEEC-------CEEEEEEEEEEESHHHHHHHHTCCCTTCEEEEEEEE
T ss_pred CCEEEEEEEECCCCEEEE-CCCCCEEEEEEEEECCCEECCCCCEEEEEEEEEEEEECCHHHHHHHHCCCCCCEEEEEEEE
T ss_conf 449999999776988998-7999889999999789678799879862005668886704655023116899999999997
Q ss_pred E--EEC-----CCCEEEEEEEEEEECCC
Q ss_conf 6--752-----88437999997101680
Q gi|254780791|r 93 T--TFP-----GSSKYQIIIESLIPSGS 113 (529)
Q Consensus 93 ~--~y~-----~~g~~ql~v~~i~~~g~ 113 (529)
. .|. .+..+.+.+++++.-+-
T Consensus 82 ~~~~~~~~dG~~r~~~~i~a~~v~~l~~ 109 (231)
T d1se8a_ 82 EYRQWEAPEGGKRSAVNVKALRMEQLGT 109 (231)
T ss_dssp EEEEEC-----CEEEEEEEEEEEEECSS
T ss_pred EEEEEECCCCCEEEEEEEEEEEEEECCC
T ss_conf 8503699999899999999999999358
No 11
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]}
Probab=91.09 E-value=0.5 Score=25.23 Aligned_cols=100 Identities=20% Similarity=0.241 Sum_probs=54.5
Q ss_pred CCCCCCEEEEEECCCHHHHHH-HHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
Q ss_conf 102652899984784258999-9998630597589997210011110367999999997410035767775899951688
Q gi|254780791|r 141 IPFIPKIIAVITSPTGAVIRD-ILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 (529)
Q Consensus 141 lP~~p~~i~vits~~~a~~~D-~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG 219 (529)
+|.+.+++.|||.++-+.+.+ +...+.. .+++.+|. ||. .+++...-+..+.+.+. ...+.|+ ||+=|||
T Consensus 24 l~~~~~k~~iV~D~~V~~~~~~~~~~l~~---~~i~~i~~---gE~-~Ksl~~~~~i~~~l~~~-~~~r~~~-iiaiGGG 94 (347)
T d1ujna_ 24 VPPLAGPAALLFDRRVEGFAQEVAKALGV---RHLLGLPG---GEA-AKSLEVYGKVLSWLAEK-GLPRNAT-LLVVGGG 94 (347)
T ss_dssp SCCCSSCEEEEEEGGGHHHHHHHHHHHTC---CCEEEECC---SGG-GSSHHHHHHHHHHHHHH-TCCTTCE-EEEEESH
T ss_pred HHHHHCCEEEEECCCHHHHHHHHHHHCCC---CEEEEECC---CCC-CCCHHHHHHHHHHHHHH-HCCCCCC-EEEEECH
T ss_conf 68875889999894589999999984478---65999789---855-39999999999999973-2035653-3686033
Q ss_pred CHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
Q ss_conf 8444220076999999974890488520577752589886
Q gi|254780791|r 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259 (529)
Q Consensus 220 S~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~V 259 (529)
++-|+..| |-++|.-.+|.|.= -||++=+|
T Consensus 95 ~v~D~agf-----~A~~y~rgi~~i~v-----PTtlla~v 124 (347)
T d1ujna_ 95 TLTDLGGF-----VAATYLRGVAYLAF-----PTTTLAIV 124 (347)
T ss_dssp HHHHHHHH-----HHHHBTTCCEEEEE-----ECSHHHHH
T ss_pred HHHHHHHH-----HHHHHCCCCCEEEC-----CCHHHHCC
T ss_conf 23357888-----76543178503403-----65143034
No 12
>d1gm5a2 b.40.4.9 (A:106-285) RecG "wedge" domain {Thermotoga maritima [TaxId: 2336]}
Probab=90.74 E-value=0.14 Score=30.32 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=49.4
Q ss_pred CEEEEEEECCCCCCC-CCCEE-EEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEE
Q ss_conf 189999970543568-88627-99987489479999973521058668145988999999667528843799999710
Q gi|254780791|r 34 HVCVRGEISGYRGIH-SSGHA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 (529)
Q Consensus 34 ~~~v~gEis~~~~~~-~sGH~-Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~ 109 (529)
.+.|.|.|...+... .+... .+.+.|+...|.|++|...+....++...|+.|++.|++..-.-++.+|+.--.+.
T Consensus 62 ~vti~g~V~~~~~~~~~~~~~~~~~v~D~~g~i~l~fFn~~~~~~~~k~~~G~~v~v~Gkvk~~~~~~~~q~~~p~~~ 139 (180)
T d1gm5a2 62 KVTTQGKIVSVETKKFQNMNILTAVLSDGLVHVPLKWFNQDYLQTYLKQLTGKEVFVTGTVKSNAYTGQYEIHNAEVT 139 (180)
T ss_dssp CCEEEECCCCCEEEECSSCEEEEEEECCSSCCEEEEECSCCTTHHHHHTTCSSCEEEEEEECSCCTTSSCCEEEEEEE
T ss_pred EEEEEEEEEEECCCCCCCCCEEEEEEEECCCEEEEEEECCHHHHHHHHHHCCCEEEEEEEEEECCCCCEEECCCCEEC
T ss_conf 444423787632332235212578998524407788867389999875413956999987720221660115685465
No 13
>d3ulla_ b.40.4.3 (A:) ssDNA-binding protein {Human (Homo sapiens), mitochondria [TaxId: 9606]}
Probab=90.67 E-value=0.45 Score=25.62 Aligned_cols=82 Identities=20% Similarity=0.296 Sum_probs=53.1
Q ss_pred HHHCCCCEEEEEEECC---CCCCCCCCE--EEEEEE------CC-------------CCEEEEEEECCCCCC-CCCCCCC
Q ss_conf 7400171899999705---435688862--799987------48-------------947999997352105-8668145
Q gi|254780791|r 28 VESNLSHVCVRGEISG---YRGIHSSGH--AYFSLK------DN-------------HSRIDAIIWKGTLNK-IEFLPEE 82 (529)
Q Consensus 28 l~~~~~~~~v~gEis~---~~~~~~sGH--~Yf~lk------d~-------------~a~i~~~~~~~~~~~-~~~~~~~ 82 (529)
++..+..|-+.|-|.+ ++. ..+|. +-|+|- |. ..-++|++|...+.. +.-.++-
T Consensus 1 ~~~~mN~V~L~G~l~~dpe~r~-t~~G~~v~~f~vAv~~~~~~~~~~~~~~g~~~~~t~w~~v~~~g~~~a~~~~~~l~K 79 (115)
T d3ulla_ 1 LERSLNRVHLLGRVGQDPVLRQ-VEGKNPVTIFSLATNEMWRSGDSEVYQLGDVSQKTTWHRISVFRPGLRDVAYQYVKK 79 (115)
T ss_dssp CCCCEEEEEEEEEECSCCEEEC-CTTSCCEEEEEEEEEEEECC---------CCEEEEEEEEEEECSTTHHHHHHHHCCT
T ss_pred CCCCEEEEEEEEECCCCCEEEE-ECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHCCC
T ss_conf 9873269999998888989999-189988999999706641166665121332035200351123411110224531557
Q ss_pred CCEEEEEEEEE--EEC-CC----CEEEEEEEEEEE
Q ss_conf 98899999966--752-88----437999997101
Q gi|254780791|r 83 GIEFLVIGKIT--TFP-GS----SKYQIIIESLIP 110 (529)
Q Consensus 83 G~~v~~~g~~~--~y~-~~----g~~ql~v~~i~~ 110 (529)
|+.|.|.|++. .|. +. ..+.++|++|+.
T Consensus 80 G~~V~V~Grl~~~~~~dkdG~~r~~~~v~a~~i~~ 114 (115)
T d3ulla_ 80 GSRIYLEGKIDYGEYMDKNNVRRQATTIIADNIIF 114 (115)
T ss_dssp TCEEEEEEEEECCCEESSSSEECCCEEEEEEEEEC
T ss_pred CCEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEE
T ss_conf 87999998771035898999899999999999995
No 14
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.30 E-value=0.38 Score=26.28 Aligned_cols=78 Identities=19% Similarity=0.187 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH----HHHHHCC-----------------HHHHHHHHHHCCCE
Q ss_conf 11036799999999741003576777589995168884----4422007-----------------69999999748904
Q gi|254780791|r 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI----EDLWHFN-----------------DEMIVRAIANSSIP 242 (529)
Q Consensus 184 ~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~----eDL~~FN-----------------~e~laraI~~~~iP 242 (529)
.....+|..+|..+... ...+|| .+|.|.. -||-.|. -..+.+++..||.|
T Consensus 29 ~~~~~el~~al~~~~~d-------~~~~vv-l~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP 100 (258)
T d2fw2a1 29 TEVIKEMVNALNSAAAD-------DSKLVL-FSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNTFIQFKKP 100 (258)
T ss_dssp HHHHHHHHHHHHHHHHS-------SCSEEE-EEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHHCC-------CCEEEE-EECCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 99999999999998719-------977999-9557421023432111110012211102467777889998763102101
Q ss_pred EEEEE-CCCCC-CHHHHHHHCCCCCCCHH
Q ss_conf 88520-57775-25898864123777214
Q gi|254780791|r 243 IISAI-GHETD-WTLADYAADLRAPTPTG 269 (529)
Q Consensus 243 VisgI-GHE~D-~Tl~D~VAD~Ra~TPTa 269 (529)
||++| ||-.- =.-.=+.+|.|..++.+
T Consensus 101 ~Iaav~G~a~GgG~~lal~~D~~ia~~~a 129 (258)
T d2fw2a1 101 IVVSVNGPAIGLGASILPLCDLVWANEKA 129 (258)
T ss_dssp EEEEECSCEETHHHHTGGGSSEEEEETTC
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCEECCC
T ss_conf 34200344545543323344400210133
No 15
>d1ue1a_ b.40.4.3 (A:) ssDNA-binding protein {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.25 E-value=0.63 Score=24.34 Aligned_cols=77 Identities=19% Similarity=0.409 Sum_probs=54.1
Q ss_pred CEEEEEEECC---CCCCCCCCEE--EEEEE------CC---------CCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 1899999705---4356888627--99987------48---------947999997352105866814598899999966
Q gi|254780791|r 34 HVCVRGEISG---YRGIHSSGHA--YFSLK------DN---------HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKIT 93 (529)
Q Consensus 34 ~~~v~gEis~---~~~~~~sGH~--Yf~lk------d~---------~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~ 93 (529)
.|-+.|-|.+ ++.. .+|.- .|+|- |. ..-++|++|...+..+.-.++.|+.|.|.|++.
T Consensus 4 ~V~L~G~l~~dpe~r~~-~~G~~v~~f~lA~~~~~~~~~~~~~~~~~t~~~~v~~~g~~Ae~~~~~l~KG~~V~V~G~L~ 82 (118)
T d1ue1a_ 4 TITIVGNLTADPELRFT-PSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLK 82 (118)
T ss_dssp EEEEEEEESSCCEEEEC-TTSCEEEEEEEEECCCCCC-----CCCCCCEEEEEEEEHHHHHHHHHHCCTTCEEEEEEEEE
T ss_pred EEEEEEECCCCCEEEEC-CCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHHHHCCCCCEEEEEEEEE
T ss_conf 89999985759889997-99978999999733420015777311343156799867699999998636998999991866
Q ss_pred --EEC-----CCCEEEEEEEEEEEC
Q ss_conf --752-----884379999971016
Q gi|254780791|r 94 --TFP-----GSSKYQIIIESLIPS 111 (529)
Q Consensus 94 --~y~-----~~g~~ql~v~~i~~~ 111 (529)
.|. .+..+.+.+++|-|.
T Consensus 83 ~~~~~~~dG~~r~~~~v~a~~vg~~ 107 (118)
T d1ue1a_ 83 QRSFETREGEKRTVIEVEVDEIGPS 107 (118)
T ss_dssp EEEECSSSSSCEEEEEEEEEEEEEC
T ss_pred ECEEECCCCCEEEEEEEEEEEECCC
T ss_conf 0117999998999999999880455
No 16
>d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]}
Probab=90.18 E-value=0.64 Score=24.30 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=69.4
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHH----CCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCC
Q ss_conf 8888888889862299999999999740----017189999970543568886279998748947999997352105866
Q gi|254780791|r 3 PFSQKNSLDHPEYSVSELSYHLKHIVES----NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78 (529)
Q Consensus 3 ~~~~~~~~~~~~~svs~l~~~i~~~l~~----~~~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~ 78 (529)
|+|.+.. +-.|+.++...-...-.. .=..|.|-|=|...|. + ++=.+++|.|...+|.+.+=+.....-.|
T Consensus 24 pYP~~~~---~t~~~~ei~~~~~~~~~~~~~~~~~~V~vaGRI~~~R~-~-Gk~~F~~i~D~~g~iQi~~~~~~~~~~~~ 98 (143)
T d1e1oa1 24 AFPNDFR---RDHTSDQLHEEFDAKDNQELESLNIEVSVAGRMMTRRI-M-GKASFVTLQDVGGRIQLYVARDSLPEGVY 98 (143)
T ss_dssp SSCCCCC---CSCCHHHHHHHHTTCCHHHHHHHCCEEEEEEEEEEEEE-E-TTEEEEEEEETTEEEEEEEETTTSSTTHH
T ss_pred CCCCCCC---CCCCHHHHHHHHHCCCCHHHHCCCCEEEEEEEEEEECC-C-CCEEEEEEEECCCEEEEEECCCCCHHHHH
T ss_conf 9999886---87639999998742363122203856999999999803-6-88068999967960799982564114567
Q ss_pred -----CCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEC
Q ss_conf -----814598899999966752884379999971016
Q gi|254780791|r 79 -----LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 (529)
Q Consensus 79 -----~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~~~ 111 (529)
.+.-||-|-|.|.+. ...+|.+++.++.+..-
T Consensus 99 ~~~~k~ld~GDiIgv~G~~~-~TktGElsi~~~~~~lL 135 (143)
T d1e1oa1 99 NDQFKKWDLGDIIGARGTLF-KTQTGELSIHCTELRLL 135 (143)
T ss_dssp HHTGGGCCTTCEEEEEEEEE-ECTTCCEEEEEEEEEEE
T ss_pred HHHHHCCCCCCEEEEECCCE-ECCCCCEEEEEEEEEEE
T ss_conf 88874377246999506627-89998689995699982
No 17
>d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.10 E-value=0.65 Score=24.24 Aligned_cols=86 Identities=16% Similarity=0.171 Sum_probs=61.2
Q ss_pred HHHHHHHCC--CCEEEEEEECCCCCCCCCCE-EEEEEECCCCEEEEEEECCCCCCCC-------CCCCCCCEEEEEEEEE
Q ss_conf 999974001--71899999705435688862-7999874894799999735210586-------6814598899999966
Q gi|254780791|r 24 LKHIVESNL--SHVCVRGEISGYRGIHSSGH-AYFSLKDNHSRIDAIIWKGTLNKIE-------FLPEEGIEFLVIGKIT 93 (529)
Q Consensus 24 i~~~l~~~~--~~~~v~gEis~~~~~~~sGH-~Yf~lkd~~a~i~~~~~~~~~~~~~-------~~~~~G~~v~~~g~~~ 93 (529)
++++..... ..|||.|=|.+.|. .+++ ++++|.|..+.+.|++......... -.+..|+-|.|.|.|.
T Consensus 26 i~dl~~~~~~g~~V~v~GwV~~~R~--~G~kl~F~~LrD~sg~iQ~~v~~~~~~~~~~~~~~~~~~l~~es~V~V~G~v~ 103 (134)
T d1eova1 26 FVDLDEAKDSDKEVLFRARVHNTRQ--QGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKWAGSLNLESIVLVRGIVK 103 (134)
T ss_dssp GGGCCTTTTTTCEEEEEEEEEEEEE--CSSSEEEEEEEETTEEEEEEEECCSSSSSCHHHHHHHTTCCTTCEEEEEEEEE
T ss_pred ECCCCCHHCCCCEEEEEEEEEEEEE--CCCCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEE
T ss_conf 6165651108989999999999983--79948999997588768899991456504677788996599878999999999
Q ss_pred EECC-------CCEEEEEEEEEEECC
Q ss_conf 7528-------843799999710168
Q gi|254780791|r 94 TFPG-------SSKYQIIIESLIPSG 112 (529)
Q Consensus 94 ~y~~-------~g~~ql~v~~i~~~g 112 (529)
=.| .+.|-+.|+.|+.-+
T Consensus 104 -~~~~~~~~~~~~~~Ei~v~~i~vls 128 (134)
T d1eova1 104 -KVDEPIKSATVQNLEIHITKIYTIS 128 (134)
T ss_dssp -ECSSCCTTSSEEEEEEEEEEEEEEE
T ss_pred -ECCCCCCCCCCCCEEEEEEEEEEEE
T ss_conf -5886677899776999998999996
No 18
>d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]}
Probab=89.98 E-value=0.66 Score=24.17 Aligned_cols=78 Identities=10% Similarity=0.169 Sum_probs=56.1
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCC--CCCCCCCEEEEEEEEEEEC--------CCCEEE
Q ss_conf 718999997054356888627999874894799999735210586--6814598899999966752--------884379
Q gi|254780791|r 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE--FLPEEGIEFLVIGKITTFP--------GSSKYQ 102 (529)
Q Consensus 33 ~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~--~~~~~G~~v~~~g~~~~y~--------~~g~~q 102 (529)
..|+|.|=|.+.|. .++=.++.|+|..+.+.|++......... -.+..+.-|.+.|.|---+ +.|.|-
T Consensus 16 ~~V~v~GWv~~~R~--~g~i~Fi~LRD~~G~~Q~v~~~~~~~~~~~~~~l~~Es~v~V~G~V~~r~~~~~n~~~~tg~iE 93 (106)
T d1c0aa1 16 QQVTLCGWVNRRRD--LGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIE 93 (106)
T ss_dssp CEEEEEEEEEEEEE--CSSCEEEEEEETTEEEEEEECGGGHHHHHHHTTCCTTCEEEEEEEEEECCTTTCCTTSTTTTEE
T ss_pred CEEEEEEEEEEEEE--CCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEE
T ss_conf 98999999987552--8983999998597577589525404678999761700069987277516744458888998689
Q ss_pred EEEEEEEECC
Q ss_conf 9999710168
Q gi|254780791|r 103 IIIESLIPSG 112 (529)
Q Consensus 103 l~v~~i~~~g 112 (529)
+.++.++.-+
T Consensus 94 i~v~~i~vl~ 103 (106)
T d1c0aa1 94 VLASSLTIIN 103 (106)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEE
T ss_conf 9981999996
No 19
>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}
Probab=89.33 E-value=0.54 Score=24.97 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC-H---HHH--------------HHCCH--HHHHHHHHHCCCEEE
Q ss_conf 103679999999974100357677758999516888-4---442--------------20076--999999974890488
Q gi|254780791|r 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS-I---EDL--------------WHFND--EMIVRAIANSSIPII 244 (529)
Q Consensus 185 ~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS-~---eDL--------------~~FN~--e~laraI~~~~iPVi 244 (529)
....++..++..++... .+.+||| +|+|. + -|| +.++. ..+.++|..||.|||
T Consensus 35 ~~~~el~~al~~~~~d~------~v~~vVl-~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 107 (310)
T d1wdka4 35 LTLNELRQAVDAIKADA------SVKGVIV-SSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTV 107 (310)
T ss_dssp HHHHHHHHHHHHHHHCT------TCCEEEE-EESSSSSBBCCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEE
T ss_pred HHHHHHHHHHHHHHHCC------CCEEEEE-ECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 99999999999998489------9569999-7899874100115666520101001122323678899888632881111
Q ss_pred EEEC-CCCC-CHHHHHHHCCCCCCCHH
Q ss_conf 5205-7775-25898864123777214
Q gi|254780791|r 245 SAIG-HETD-WTLADYAADLRAPTPTG 269 (529)
Q Consensus 245 sgIG-HE~D-~Tl~D~VAD~Ra~TPTa 269 (529)
++|- |=.- =.-.=+.+|.|..++++
T Consensus 108 aav~G~a~GgG~elal~cD~ria~~~a 134 (310)
T d1wdka4 108 AAINGIALGGGLEMCLAADFRVMADSA 134 (310)
T ss_dssp EEECSCEETHHHHHHHTSSEEEEETTC
T ss_pred EECCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 000344544443221002431036433
No 20
>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=89.05 E-value=0.62 Score=24.39 Aligned_cols=78 Identities=14% Similarity=0.254 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC---------------HHHHHHCC--HHHHHHHHHHCCCEEEEEE
Q ss_conf 103679999999974100357677758999516888---------------44422007--6999999974890488520
Q gi|254780791|r 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS---------------IEDLWHFN--DEMIVRAIANSSIPIISAI 247 (529)
Q Consensus 185 ~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS---------------~eDL~~FN--~e~laraI~~~~iPVisgI 247 (529)
....++..++..++... .+-+||| +|.|. .+|...|. -..+.+++.+||.|||++|
T Consensus 40 ~~~~el~~al~~~~~d~------~v~~vvl-~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~pvIa~v 112 (249)
T d1szoa_ 40 TAHDELAYCFHDIACDR------ENKVVIL-TGTGPSFCNEIDFTSFNLGTPHDWDEIIFEGQRLLNNLLSIEVPVIAAV 112 (249)
T ss_dssp HHHHHHHHHHHHHHHCT------TCCEEEE-ECBTTBSBCEECGGGSCCSSHHHHHHHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHCC------CCCEEEE-ECCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 99999999999997498------8645765-1244322332014554224432001222221000000014764311222
Q ss_pred CCCC-CCHHHHHHHCCCCCCCHH
Q ss_conf 5777-525898864123777214
Q gi|254780791|r 248 GHET-DWTLADYAADLRAPTPTG 269 (529)
Q Consensus 248 GHE~-D~Tl~D~VAD~Ra~TPTa 269 (529)
|.-. ==...=+.+|.|..++.+
T Consensus 113 ~g~~~GG~~l~l~~D~ria~~~a 135 (249)
T d1szoa_ 113 NGPVTNAPEIPVMSDIVLAAESA 135 (249)
T ss_dssp CSCBCSSTHHHHTSSEEEEETTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 13332112333333323236886
No 21
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=88.76 E-value=0.79 Score=23.48 Aligned_cols=81 Identities=11% Similarity=0.146 Sum_probs=43.3
Q ss_pred CEEEEEEC-CCHHHHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 28999847-842589999998630---59758999721001111036799999999741003576777589995168884
Q gi|254780791|r 146 KIIAVITS-PTGAVIRDILQRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 146 ~~i~vits-~~~a~~~D~~~~~~~---r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
|+||||.+ .+..-+.++++-+.+ +..+.+.++++. ..+.+..+.++.+... .+|.+||.-...
T Consensus 1 ktIg~i~~~~~~pf~~~~~~gi~~~~~~~gy~~~~~~~~----~d~~~~~~~~~~l~~~-------~vdgiIi~~~~~-- 67 (282)
T d1dbqa_ 1 KSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAW----NNLEKQRAYLSMMAQK-------RVDGLLVMCSEY-- 67 (282)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHHTCEEEEEECT----TCHHHHHHHHHHHHHT-------TCSEEEEECSCC--
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC----CCHHHHHHHHHHHHHC-------CCCEEEEECCCC--
T ss_conf 989999577977899999999999999869999999689----9989999999999966-------998786311224--
Q ss_pred HHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 442200769999999748904885
Q gi|254780791|r 222 EDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 222 eDL~~FN~e~laraI~~~~iPVis 245 (529)
++..+........+|||+
T Consensus 68 ------~~~~~~~~~~~~~iPvV~ 85 (282)
T d1dbqa_ 68 ------PEPLLAMLEEYRHIPMVV 85 (282)
T ss_dssp ------CHHHHHHHHHTTTSCEEE
T ss_pred ------CCHHHHHHHHHCCCCCEE
T ss_conf ------313566677643797269
No 22
>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}
Probab=88.31 E-value=0.77 Score=23.60 Aligned_cols=81 Identities=16% Similarity=0.152 Sum_probs=46.4
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC-CH---HHH---HHCC-----------HHHHHHHHHHCCCEEE
Q ss_conf 1110367999999997410035767775899951688-84---442---2007-----------6999999974890488
Q gi|254780791|r 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG-SI---EDL---WHFN-----------DEMIVRAIANSSIPII 244 (529)
Q Consensus 183 G~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG-S~---eDL---~~FN-----------~e~laraI~~~~iPVi 244 (529)
......++..++..++... .+-+|||.-||| ++ -|| ..++ -..+.+++..||.|||
T Consensus 25 ~~~~~~~l~~~l~~~~~d~------~i~~vVl~~~g~~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvI 98 (230)
T d2a7ka1 25 SRTLETSVKDALARANADD------SVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVNKPTI 98 (230)
T ss_dssp CHHHHHHHHHHHHHHHHCT------TCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHHHHHHHHHHHHHTCCSCEE
T ss_pred CHHHHHHHHHHHHHHHHCC------CCCCCCEECCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHCCEE
T ss_conf 9999999999999997397------6430000002104554320232122333233322110110000000200000000
Q ss_pred EEEC-CCCC-CHHHHHHHCCCCCCCHH
Q ss_conf 5205-7775-25898864123777214
Q gi|254780791|r 245 SAIG-HETD-WTLADYAADLRAPTPTG 269 (529)
Q Consensus 245 sgIG-HE~D-~Tl~D~VAD~Ra~TPTa 269 (529)
++|- |=.- =.-.=+.+|.|..++.+
T Consensus 99 aav~G~a~GgG~~lal~~D~~ia~~~a 125 (230)
T d2a7ka1 99 AAVDGYAIGMGFQFALMFDQRLMASTA 125 (230)
T ss_dssp EEECSEEETHHHHHHTTSSEEEEETTC
T ss_pred EECCCCCCCCCCCCHHCCCHHHCCCCC
T ss_conf 110024555442200011110001321
No 23
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=88.26 E-value=0.84 Score=23.23 Aligned_cols=19 Identities=32% Similarity=0.214 Sum_probs=7.4
Q ss_pred EEEEEC-CCHHHHHHHHHHH
Q ss_conf 999847-8425899999986
Q gi|254780791|r 148 IAVITS-PTGAVIRDILQRI 166 (529)
Q Consensus 148 i~vits-~~~a~~~D~~~~~ 166 (529)
||||++ -+..++..++.-+
T Consensus 3 igv~~~~l~~~~~~~i~~~i 22 (271)
T d1jyea_ 3 IGVATSSLALHAPSQIVAAI 22 (271)
T ss_dssp EEEEESCTTSHHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHH
T ss_conf 99994998875899999999
No 24
>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.11 E-value=0.44 Score=25.74 Aligned_cols=78 Identities=12% Similarity=0.076 Sum_probs=43.6
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC-CH---HHHHHCC------------------------HHHHHHH
Q ss_conf 110367999999997410035767775899951688-84---4422007------------------------6999999
Q gi|254780791|r 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG-SI---EDLWHFN------------------------DEMIVRA 235 (529)
Q Consensus 184 ~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG-S~---eDL~~FN------------------------~e~lara 235 (529)
.....++..+++.++... .+.+||| +|-| .+ -||-.|. .-.+...
T Consensus 31 ~~~~~el~~al~~~~~d~------~v~~vVl-~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (266)
T d1pjha_ 31 GEDYIYLGELLELADRNR------DVYFTII-QSSGRFFSSGADFKGIAKAQGDDTNKYPSETSKWVSNFVARNVYVTDA 103 (266)
T ss_dssp HHHHHHHHHHHHHHHHCT------TCCEEEE-ECBTTBSBCCBCHHHHHC-------CCSSHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCC------CCEEEEE-ECCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999998499------9619999-566421033500999972223432122101267899999989999999
Q ss_pred HHHCCCEEEEEE-CCCCC-CHHHHHHHCCCCCCCH
Q ss_conf 974890488520-57775-2589886412377721
Q gi|254780791|r 236 IANSSIPIISAI-GHETD-WTLADYAADLRAPTPT 268 (529)
Q Consensus 236 I~~~~iPVisgI-GHE~D-~Tl~D~VAD~Ra~TPT 268 (529)
+..||.|||.+| ||=.= =..+=+.+|.|..++-
T Consensus 104 l~~~~kP~IAav~G~a~GgG~~lal~~D~~ia~~~ 138 (266)
T d1pjha_ 104 FIKHSKVLICCLNGPAIGLSAALVALCDIVYSIND 138 (266)
T ss_dssp HHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESST
T ss_pred HHHCCHHHHHHHHCCCCCCCCCCHHCCCHHHHHHC
T ss_conf 99663224256421354534221001102233100
No 25
>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.03 E-value=0.69 Score=24.02 Aligned_cols=78 Identities=14% Similarity=0.093 Sum_probs=42.6
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC-------CCH----HHHHHCC---------------H---------
Q ss_conf 1036799999999741003576777589995168-------884----4422007---------------6---------
Q gi|254780791|r 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGG-------GSI----EDLWHFN---------------D--------- 229 (529)
Q Consensus 185 ~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGG-------GS~----eDL~~FN---------------~--------- 229 (529)
.-..+|..+|+.++... .+.+||| +|+ |.. .||..+. +
T Consensus 47 ~m~~eL~~~l~~~~~d~------~vr~vVl-tg~~~~f~~gG~~f~ag~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (297)
T d1q52a_ 47 HTVDELYRVLDHARMSP------DVGVVLL-TGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHI 119 (297)
T ss_dssp HHHHHHHHHHHHHHHCT------TCCEEEE-EECCCCTTTCCCEEECCC-----------------------------CH
T ss_pred HHHHHHHHHHHHHHHCC------CCCEEEE-ECCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999997299------9657999-6688765525665542011344302332223344310035678888889
Q ss_pred HHHHHHHHHCCCEEEEEEC-CCCCC-HHHHHHHCCCCCCCHH
Q ss_conf 9999999748904885205-77752-5898864123777214
Q gi|254780791|r 230 EMIVRAIANSSIPIISAIG-HETDW-TLADYAADLRAPTPTG 269 (529)
Q Consensus 230 e~laraI~~~~iPVisgIG-HE~D~-Tl~D~VAD~Ra~TPTa 269 (529)
..+.+.|..||.|||++|= |=.-- +..=+.+|.|..|+.+
T Consensus 120 ~~~~~~i~~~~kPvIaav~G~a~GGG~~lal~~D~~ia~~~~ 161 (297)
T d1q52a_ 120 LEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREY 161 (297)
T ss_dssp HHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTT
T ss_pred HHHHHHHHHCCCEEEEEECCEEEECCCHHHHHHHCCCCCCCC
T ss_conf 999999985298399997241664110555544302001243
No 26
>d1xjva1 b.40.4.3 (A:6-145) Protection of telomeres protein 1, Pot1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.60 E-value=0.91 Score=22.92 Aligned_cols=71 Identities=18% Similarity=0.267 Sum_probs=49.6
Q ss_pred EEEEEEECCCCCC-CCCC---EEEEEEECCC-CEEEEEEECCCCCCCCCCCCCCCEEEEE-EEEEEECCCCEEEEEEEE
Q ss_conf 8999997054356-8886---2799987489-4799999735210586681459889999-996675288437999997
Q gi|254780791|r 35 VCVRGEISGYRGI-HSSG---HAYFSLKDNH-SRIDAIIWKGTLNKIEFLPEEGIEFLVI-GKITTFPGSSKYQIIIES 107 (529)
Q Consensus 35 ~~v~gEis~~~~~-~~sG---H~Yf~lkd~~-a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g~~~~y~~~g~~ql~v~~ 107 (529)
|-|.|-|.+++.. .+.| .+.|+|.|+. +.+.|.+|+.....|+.-++.||=|+++ .++..|. |..|++...
T Consensus 18 vnv~gVV~~~~~p~~s~g~D~~~tl~I~D~S~~gl~v~iF~~~~~~LP~v~~~GDII~l~r~~v~~~~--~~~~~~~~~ 94 (140)
T d1xjva1 18 VNVYGVVKFFKPPYLSKGTDYCSVVTIVDQTNVKLTCLLFSGNYEALPIIYKNGDIVRFHRLKIQVYK--KETQGITSS 94 (140)
T ss_dssp EEEEEEEEEEEEEEECSSSSEEEEEEEECTTCCEEEEEEEESSGGGSCCCCSTTCEEEEEEEEEEEET--TEEEEEEEE
T ss_pred EEEEEEEEECCCCEECCCCEEEEEEEEEECCCCCEEEEEECCCHHHCCCCCCCCCEEEEEEEEEEEEC--CEEEEEECC
T ss_conf 99999996647877769984999999996899981999988996789997898989999778999988--958899649
No 27
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]}
Probab=87.46 E-value=0.13 Score=30.50 Aligned_cols=115 Identities=20% Similarity=0.281 Sum_probs=66.6
Q ss_pred CEEEEEECC----CHHHHHHHHHHHH--HCCCEEEEEEEC---CCCC------CCHH--H-HHHHHHHH----HHHHCCC
Q ss_conf 289998478----4258999999863--059758999721---0011------1103--6-79999999----9741003
Q gi|254780791|r 146 KIIAVITSP----TGAVIRDILQRIS--CRFPLRVIIFPV---KVQG------DECP--K-EIANAILQ----LNTLKEG 203 (529)
Q Consensus 146 ~~i~vits~----~~a~~~D~~~~~~--~r~p~~~~~~p~---~vQG------~~a~--~-~i~~ai~~----~~~~~~~ 203 (529)
++|+||-|. +|.=...+..++. +|.++++.++.. .+++ +... . ..+.+-.. ...+.+.
T Consensus 2 kKvaviLsg~g~~DG~E~~E~~~~~~~L~raG~~v~~~sp~~~~~~~~~h~~~~~~~~~r~~~~~~~~i~~~~~~~l~~v 81 (217)
T d1vhqa_ 2 KKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQQVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQA 81 (217)
T ss_dssp CEEEEECCSBSTTTSBCHHHHHHHHHHHHHTTCEEEEEECSSBCSCCBCTTTCCBCSCCCBHHHHHTTTTTTCCEEGGGC
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCEEEEEEEEECCCCCCHHHC
T ss_conf 87999955888877420989999999999889989999469984521506888623542352432102301356876788
Q ss_pred CCCCCCCEEEEECCCCCHHHHHHCC-----------HHHHHHHHHHCCCEEEEEECCCCCCHHHHH-HHCCC
Q ss_conf 5767775899951688844422007-----------699999997489048852057775258988-64123
Q gi|254780791|r 204 RTCPRPDIIILARGGGSIEDLWHFN-----------DEMIVRAIANSSIPIISAIGHETDWTLADY-AADLR 263 (529)
Q Consensus 204 ~~~~~~D~iii~RGGGS~eDL~~FN-----------~e~laraI~~~~iPVisgIGHE~D~Tl~D~-VAD~R 263 (529)
....||+|+|-=|-|+..+|..|. -..+++..++..-|| .+|.|-. ..|+-. +.+.+
T Consensus 82 -~~~~yDaliiPGG~g~~~~l~~~~~~~~~~~~~~~v~~li~~~~~~gk~i-aaIC~gp-~~l~~~~~~~~~ 150 (217)
T d1vhqa_ 82 -DAAELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPL-GFMCIAP-AMLPKIFDFPLR 150 (217)
T ss_dssp -CGGGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCE-EEETTGG-GGHHHHCSSCCE
T ss_pred -CHHHCCEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE-EEECHHH-HHHHHHHCCCCC
T ss_conf -98478789966986637777652102421222899999999999869979-9988608-999998464887
No 28
>d1zl0a2 c.23.16.7 (A:3-169) LD-carboxypeptidase A, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=86.51 E-value=1 Score=22.46 Aligned_cols=106 Identities=15% Similarity=0.084 Sum_probs=61.5
Q ss_pred CCCCC--CEEEEEECCCHHHHHHHHH---HHHHCCCEEEEEEECCCC--CCC--HHHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 10265--2899984784258999999---863059758999721001--111--03679999999974100357677758
Q gi|254780791|r 141 IPFIP--KIIAVITSPTGAVIRDILQ---RISCRFPLRVIIFPVKVQ--GDE--CPKEIANAILQLNTLKEGRTCPRPDI 211 (529)
Q Consensus 141 lP~~p--~~i~vits~~~a~~~D~~~---~~~~r~p~~~~~~p~~vQ--G~~--a~~~i~~ai~~~~~~~~~~~~~~~D~ 211 (529)
-|.-| -+||||+..++..-..+-. .++ .++++|.+.+..-. |.- ..++=++.|..+- . .+.+|+
T Consensus 7 ~~~~P~Gd~I~iiAPS~~~~~~~l~~~~~~L~-~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~--~----dp~i~a 79 (167)
T d1zl0a2 7 QTWQPIDGRVALIAPASAIATDVLEATLRQLE-VHGVDYHLGRHVEARYRYLAGTVEQRLEDLHNAF--D----MPDITA 79 (167)
T ss_dssp CCCCCCCSEEEEECCSBCCCHHHHHHHHHHHH-HTTCCEEECTTTTCCBTTBSSCHHHHHHHHHHHH--H----STTEEE
T ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHC--C----CCCCCE
T ss_conf 88899979999995798689999999999999-7898898786502346765699999999998753--1----767888
Q ss_pred EEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCH-HHHHH
Q ss_conf 9995168884442200769999999748904885205777525-89886
Q gi|254780791|r 212 IILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT-LADYA 259 (529)
Q Consensus 212 iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~T-l~D~V 259 (529)
|+-+|||=..--|..+=|.+..++ +.|-++ ||+. |.| |.=+.
T Consensus 80 I~~~rGGyGa~rlL~~lD~~~i~~--~~pK~~---iGyS-DiTaL~~~l 122 (167)
T d1zl0a2 80 VWCLRGGYGCGQLLPGLDWGRLQA--ASPRPL---IGFS-DISVLLSAF 122 (167)
T ss_dssp EEESCCSSCGGGGTTTCCHHHHHH--SCCCCE---EECG-GGHHHHHHH
T ss_pred EEECCCHHHHHHHHHHCCHHHHHH--CCCCEE---EEEC-HHHHHHHHH
T ss_conf 998866789999874025655522--379779---9835-899999999
No 29
>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=86.16 E-value=0.76 Score=23.61 Aligned_cols=77 Identities=19% Similarity=0.227 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC-H---HHHHHCC------------------------HHHHHHHHH
Q ss_conf 03679999999974100357677758999516888-4---4422007------------------------699999997
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS-I---EDLWHFN------------------------DEMIVRAIA 237 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS-~---eDL~~FN------------------------~e~laraI~ 237 (529)
-..++..+|+.++... .+.+||| +|+|- + -||-.+- --.+..+|.
T Consensus 32 m~~el~~~l~~~~~d~------~v~~vvl-tg~~~~F~aG~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 104 (275)
T d1dcia_ 32 FWRELVECFQKISKDS------DCRAVVV-SGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIE 104 (275)
T ss_dssp HHHHHHHHHHHHHTCT------TCCEEEE-EESTTCSBCCBCHHHHHHHHTSCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC------CCEEEEE-ECCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHH
T ss_conf 9999999999997399------9669999-54466535671588862111344332111025442010012478899988
Q ss_pred HCCCEEEEEE-CCCCCC-HHHHHHHCCCCCCCHH
Q ss_conf 4890488520-577752-5898864123777214
Q gi|254780791|r 238 NSSIPIISAI-GHETDW-TLADYAADLRAPTPTG 269 (529)
Q Consensus 238 ~~~iPVisgI-GHE~D~-Tl~D~VAD~Ra~TPTa 269 (529)
.||.|||++| ||=.-- .-.=+.+|+|..++++
T Consensus 105 ~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a 138 (275)
T d1dcia_ 105 KCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138 (275)
T ss_dssp HSSSCEEEEECSEEETHHHHHHTTSSEEEEETTC
T ss_pred HCCCCEEEEEEEEEEHHHHHHHHHCCCHHHCCCC
T ss_conf 6599799998018542459987633743343676
No 30
>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.52 E-value=0.63 Score=24.37 Aligned_cols=77 Identities=21% Similarity=0.207 Sum_probs=42.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC-H---HHHHHCC-----------------HHHHHHHHHHCCCE
Q ss_conf 1103679999999974100357677758999516888-4---4422007-----------------69999999748904
Q gi|254780791|r 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS-I---EDLWHFN-----------------DEMIVRAIANSSIP 242 (529)
Q Consensus 184 ~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS-~---eDL~~FN-----------------~e~laraI~~~~iP 242 (529)
.....++..+++.++... . ++||..|+|. + -||-.|. -..+.++|..||.|
T Consensus 29 ~~~~~~l~~~l~~~~~d~------~--v~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kp 100 (245)
T d2f6qa1 29 TEMYHEIMRALKAASKDD------S--IITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKP 100 (245)
T ss_dssp HHHHHHHHHHHHHHHHSS------C--SEEEEEESTTCSBCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHHHHCCC------C--EEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf 999999999999986398------6--68863688852457863021001332333210100235777777664404786
Q ss_pred EEEEE-CCCCCC-HHHHHHHCCCCCCCH
Q ss_conf 88520-577752-589886412377721
Q gi|254780791|r 243 IISAI-GHETDW-TLADYAADLRAPTPT 268 (529)
Q Consensus 243 VisgI-GHE~D~-Tl~D~VAD~Ra~TPT 268 (529)
||++| ||=.-- .-.=+.+|.|..++.
T Consensus 101 vIa~v~G~a~GgG~~la~~~D~~ia~~~ 128 (245)
T d2f6qa1 101 LIAVVNGPAVGISVTLLGLFDAVYASDR 128 (245)
T ss_dssp EEEEECSCEETHHHHGGGGCSEEEEETT
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 3787778433455530000246555206
No 31
>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.98 E-value=0.84 Score=23.22 Aligned_cols=79 Identities=25% Similarity=0.301 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC-C-H---HHHHHC-------------CHHHHHHHHHHCCCEEEE
Q ss_conf 110367999999997410035767775899951688-8-4---442200-------------769999999748904885
Q gi|254780791|r 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG-S-I---EDLWHF-------------NDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 184 ~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG-S-~---eDL~~F-------------N~e~laraI~~~~iPVis 245 (529)
..-..++..+|+.++... .+.+||| +|+| . . -|+..+ .-..+.++|..||.|||+
T Consensus 32 ~~~~~~l~~~l~~~~~d~------~v~~vVl-~g~g~~~f~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIa 104 (266)
T d1hzda_ 32 KNLIKMLSKAVDALKSDK------KVRTIII-RSEVPGIFCAGADLKERAKMSSSEVGPFVSKIRAVINDIANLPVPTIA 104 (266)
T ss_dssp TTHHHHHHHHHHHHHHCS------SCSEEEE-EESBTEEEECCBCHHHHTTSCHHHHHHHHHHHHHHHHHHHTCSSCEEE
T ss_pred HHHHHHHHHHHHHHHHCC------CCCEEEE-ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 999999999999997498------8636887-236644304653211111111101223456777888887428742001
Q ss_pred EE-CCCCCC-HHHHHHHCCCCCCCHH
Q ss_conf 20-577752-5898864123777214
Q gi|254780791|r 246 AI-GHETDW-TLADYAADLRAPTPTG 269 (529)
Q Consensus 246 gI-GHE~D~-Tl~D~VAD~Ra~TPTa 269 (529)
+| ||=.-- .-.-+.+|.|..||++
T Consensus 105 av~G~a~GgG~~lal~~D~~ia~~~a 130 (266)
T d1hzda_ 105 AIDGLALGGGLELALACDIRVAASSA 130 (266)
T ss_dssp EESEEEETHHHHHHHHSSEEEEETTC
T ss_pred CCCCCCCCCCCEECCCCCEEEECCCC
T ss_conf 11233445552102454335644786
No 32
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=84.97 E-value=0.22 Score=28.40 Aligned_cols=85 Identities=20% Similarity=0.270 Sum_probs=43.1
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCC---CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 52899984784258999999863059---758999721001111036799999999741003576777589995168884
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCRF---PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r~---p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
-+|+-|||.++.. ...+...+...+ .+.+.+| .|....+. ++.+..+ .+ .++|+ ||+=||||.
T Consensus 30 g~r~lvVt~~~~~-~~~~~~~v~~~L~~~~i~~~v~----~~~~~~~~-i~~~~~~---~~----~~~D~-IIavGGGs~ 95 (364)
T d1kq3a_ 30 GERAFVVIDDFVD-KNVLGENFFSSFTKVRVNKQIF----GGECSDEE-IERLSGL---VE----EETDV-VVGIGGGKT 95 (364)
T ss_dssp CSEEEEEECHHHH-HHTTCTTGGGGCSSSEEEEEEC----CSSCBHHH-HHHHHTT---CC----TTCCE-EEEEESHHH
T ss_pred CCEEEEEECCCHH-HHHHHHHHHHHHHHCCCEEEEC----CCCCCCHH-HHHHHHH---HH----CCCCE-EEEECCCCC
T ss_conf 9938999898655-6479999999888669869961----89898079-9999997---52----05768-998136754
Q ss_pred HHHHHCCHHHHHHHHHH-CCCEE-----EEEECCCC
Q ss_conf 44220076999999974-89048-----85205777
Q gi|254780791|r 222 EDLWHFNDEMIVRAIAN-SSIPI-----ISAIGHET 251 (529)
Q Consensus 222 eDL~~FN~e~laraI~~-~~iPV-----isgIGHE~ 251 (529)
-|+ |++|+- ..+|+ ..|.|=|+
T Consensus 96 ~D~--------aK~ia~~~~~P~I~IPTTa~tgse~ 123 (364)
T d1kq3a_ 96 LDT--------AKAVAYKLKKPVVIVPTIASTDAPC 123 (364)
T ss_dssp HHH--------HHHHHHHTTCCEEEEESSCCCSCTT
T ss_pred CEE--------ECCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 101--------0122333421012422543333244
No 33
>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}
Probab=84.97 E-value=0.8 Score=23.42 Aligned_cols=40 Identities=28% Similarity=0.230 Sum_probs=28.6
Q ss_pred HHHHHHHHHCCCEEEEEE-CCCCC-CHHHHHHHCCCCCCCHH
Q ss_conf 999999974890488520-57775-25898864123777214
Q gi|254780791|r 230 EMIVRAIANSSIPIISAI-GHETD-WTLADYAADLRAPTPTG 269 (529)
Q Consensus 230 e~laraI~~~~iPVisgI-GHE~D-~Tl~D~VAD~Ra~TPTa 269 (529)
..+.++|.+||.|||.+| ||=.- =.-.=+.+|+|..++++
T Consensus 86 ~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a 127 (261)
T d1ef8a_ 86 RQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTS 127 (261)
T ss_dssp HHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTC
T ss_pred HHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 566778875760021024320101013433323441046767
No 34
>d1jmca1 b.40.4.3 (A:183-298) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.17 E-value=0.71 Score=23.89 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=42.8
Q ss_pred CCCCEEEEEEEC---C---CCCCCCCCE-EEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE-EEEEE
Q ss_conf 017189999970---5---435688862-7999874894799999735210586681459889999-99667
Q gi|254780791|r 31 NLSHVCVRGEIS---G---YRGIHSSGH-AYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI-GKITT 94 (529)
Q Consensus 31 ~~~~~~v~gEis---~---~~~~~~sGH-~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g~~~~ 94 (529)
...++.|+|-|. + |+.....|. +-|.|.|+.+.|+|++|...+....-.++.|.=+.+. |.|..
T Consensus 11 ~~~~~~I~~RV~~k~~~r~f~~~~~~g~v~~~~l~De~G~I~~t~~~~~~~~f~~~l~~G~vy~i~~~~V~~ 82 (116)
T d1jmca1 11 YQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKI 82 (116)
T ss_dssp TCCCCEEEEEEEEECCCEEEECSSCEEEEEEEEEECSSCEEEEEEEHHHHHHHGGGCCTTCEEEEECCEEEE
T ss_pred CCCCEEEEEEEEEECCCEEEECCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCEEEECCEEEEE
T ss_conf 998789999998713565887789972599999990899799998636632257401558799990609997
No 35
>d1o7ia_ b.40.4.3 (A:) Archaeal ssDNA-binding protein {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=82.36 E-value=1.5 Score=21.06 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=49.5
Q ss_pred CCCEEEEEEECCCC------CCCCCCEE-EEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE-EEEEEECCCCEEEE
Q ss_conf 17189999970543------56888627-999874894799999735210586681459889999-99667528843799
Q gi|254780791|r 32 LSHVCVRGEISGYR------GIHSSGHA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI-GKITTFPGSSKYQI 103 (529)
Q Consensus 32 ~~~~~v~gEis~~~------~~~~sGH~-Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g~~~~y~~~g~~ql 103 (529)
..++-|+|-|.+.. ....+|.+ -+.+.|+.+.|+.++|.-.+. .++.|+-|.+. |++..| +|.+.|
T Consensus 12 ~~~v~i~~~V~~~~~~r~~~~~~g~~~v~~~~i~DeTG~i~~~~W~~~~~----~l~~Gdvv~i~na~v~~~--~g~~el 85 (115)
T d1o7ia_ 12 MESVNVTVRVLEASEARQIQTKNGVRTISEAIVGDETGRVKLTLWGKHAG----SIKEGQVVKIENAWTTAF--KGQVQL 85 (115)
T ss_dssp CSSEEEEEEEEEECCCEEECCTTCCEEEEEEEEEETTEEEEEEEEGGGTT----CCCTTCEEEEEEEEEEEE--TTEEEE
T ss_pred CCCEEEEEEEEECCCCCEEECCCCCEEEEEEEEECCCCEEEEEEECCCCC----CCCCCCEEEEEEEEEEEE--CCEEEE
T ss_conf 98789999999887772565289987999999984898699998146222----289999999960799987--991899
Q ss_pred EEEE---EEECC
Q ss_conf 9997---10168
Q gi|254780791|r 104 IIES---LIPSG 112 (529)
Q Consensus 104 ~v~~---i~~~g 112 (529)
.+.. |+...
T Consensus 86 ~~~~~s~i~~~~ 97 (115)
T d1o7ia_ 86 NAGSKTKIAEAS 97 (115)
T ss_dssp EECTTCEEEECC
T ss_pred EECCCEEEEECC
T ss_conf 989975899988
No 36
>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}
Probab=82.24 E-value=1.5 Score=21.07 Aligned_cols=76 Identities=20% Similarity=0.279 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC-CH---HHH-------------HHC--CHHHHHHHHHHCCCEEEEE
Q ss_conf 0367999999997410035767775899951688-84---442-------------200--7699999997489048852
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGG-SI---EDL-------------WHF--NDEMIVRAIANSSIPIISA 246 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG-S~---eDL-------------~~F--N~e~laraI~~~~iPVisg 246 (529)
...++..+++.++... .+-|||| +|.| ++ -|| +.| .-..+.++|..||.|||++
T Consensus 37 m~~el~~~~~~~~~d~------~vr~vvl-~g~g~~FsaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIa~ 109 (263)
T d1wz8a1 37 LHRGLARVWRDLEAVE------GVRAVLL-RGEGGVFSAGGSFGLIEEMRASHEALLRVFWEARDLVLGPLNFPRPVVAA 109 (263)
T ss_dssp HHHHHHHHHHHHTTCT------TCSEEEE-EEGGGCCBCCBCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHHHHHHHHCC------CCEEEEE-ECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEE
T ss_conf 9999999999996199------9749999-63543222210022333101233332210245667787765310102321
Q ss_pred E-CCC--CCCHHHHHHHCCCCCCCHH
Q ss_conf 0-577--7525898864123777214
Q gi|254780791|r 247 I-GHE--TDWTLADYAADLRAPTPTG 269 (529)
Q Consensus 247 I-GHE--~D~Tl~D~VAD~Ra~TPTa 269 (529)
| ||= --..|+ +.+|+|..++++
T Consensus 110 v~G~a~GgG~~la-l~~D~~ia~~~a 134 (263)
T d1wz8a1 110 VEKVAVGAGLALA-LAADIAVVGKGT 134 (263)
T ss_dssp ECSEEETHHHHHH-HHSSEEEEETTC
T ss_pred CCCCCCCCCCCCC-CCCCCCCCCCCC
T ss_conf 1344566544421-121010123334
No 37
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}
Probab=82.12 E-value=1.5 Score=20.99 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC-CH---HHHHHCC------------------HHHHHHHHHHCCCE
Q ss_conf 10367999999997410035767775899951688-84---4422007------------------69999999748904
Q gi|254780791|r 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG-SI---EDLWHFN------------------DEMIVRAIANSSIP 242 (529)
Q Consensus 185 ~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG-S~---eDL~~FN------------------~e~laraI~~~~iP 242 (529)
....+|..+|..+.... .+-+||| +|+| ++ -||-.|. -..+..+|.+||.|
T Consensus 30 ~~~~el~~~l~~~~~d~------~i~~vvl-tg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kP 102 (269)
T d1nzya_ 30 KAMQEVTDALNRAEEDD------SVGAVMI-TGAEDAFCAGFYLREIPLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRP 102 (269)
T ss_dssp HHHHHHHHHHHHHHHCT------TCCEEEE-EESTTCSBCCBCGGGSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHCC------CCEEEEE-ECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99999999999998589------9169999-6774333302269887522354310357778888888999999863020
Q ss_pred EEEEE-CCCCCC-HHHHHHHCCCCCCCH
Q ss_conf 88520-577752-589886412377721
Q gi|254780791|r 243 IISAI-GHETDW-TLADYAADLRAPTPT 268 (529)
Q Consensus 243 VisgI-GHE~D~-Tl~D~VAD~Ra~TPT 268 (529)
||++| ||=.-- ...=+.+|.|..+++
T Consensus 103 vIaav~G~a~GgG~~lal~~D~ria~~~ 130 (269)
T d1nzya_ 103 VLAAINGVAAGGGLGISLASDMAICADS 130 (269)
T ss_dssp EEEEECSEEETHHHHHHHHSSEEEEETT
T ss_pred HEHHHHHHCCCCCEEEEECCCHHHHHHH
T ss_conf 0236555247873233204617665254
No 38
>d1jb7a1 b.40.4.3 (A:36-204) Telomere end binding protein alpha subunit {Oxytricha nova [TaxId: 200597]}
Probab=81.87 E-value=1.5 Score=20.92 Aligned_cols=72 Identities=6% Similarity=0.033 Sum_probs=49.9
Q ss_pred CEEEEEEECCCCCCC-CCC---EEEEEEECCC-------------CEEEEEEECCCCCCCCCCCCCCCEEEEE-EEEEEE
Q ss_conf 189999970543568-886---2799987489-------------4799999735210586681459889999-996675
Q gi|254780791|r 34 HVCVRGEISGYRGIH-SSG---HAYFSLKDNH-------------SRIDAIIWKGTLNKIEFLPEEGIEFLVI-GKITTF 95 (529)
Q Consensus 34 ~~~v~gEis~~~~~~-~sG---H~Yf~lkd~~-------------a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g~~~~y 95 (529)
.+-|-|-|..+.... +.| .|-|+|.|+. ..|.|.+|+.+...|+.-++.||=|+++ .++..|
T Consensus 16 ~vNv~GVV~~~~~p~~s~g~D~~~tl~I~D~S~~~~~~~~~~~~~~~l~v~~F~~~~~~LP~V~~~GDII~l~rv~i~~~ 95 (169)
T d1jb7a1 16 PQHFYAVVIDATFPYKTNQERYICSLKIVDPTLYLKQQKGAGDASDYATLVLYAKRFEDLPIIHRAGDIIRVHRATLRLY 95 (169)
T ss_dssp CEEEEEEEEEECCCEECSSSCEEEEEEEEBTTBSBCCTTSSCSCBCCEEEEEEESSGGGSCCCCEETCEEEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEEEEEEEEE
T ss_conf 68999999664786156998389999998088886654455556775699997899778898789898999988899998
Q ss_pred CCCCEEEEEEEE
Q ss_conf 288437999997
Q gi|254780791|r 96 PGSSKYQIIIES 107 (529)
Q Consensus 96 ~~~g~~ql~v~~ 107 (529)
. |..|++...
T Consensus 96 ~--g~~~~v~~~ 105 (169)
T d1jb7a1 96 N--GQRQFNANV 105 (169)
T ss_dssp T--TEEEEEEET
T ss_pred C--CCEEEEECC
T ss_conf 7--921688726
No 39
>d1qzga_ b.40.4.3 (A:) Protection of telomeres protein 1, Pot1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=81.84 E-value=1.5 Score=20.91 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=49.5
Q ss_pred CEEEEEEECCCCCC-C--CCC-EEE--EEEECCC-----CEEEEEEECCCCCCCCCCCCCCCEEEEE-EEEEEECCCCEE
Q ss_conf 18999997054356-8--886-279--9987489-----4799999735210586681459889999-996675288437
Q gi|254780791|r 34 HVCVRGEISGYRGI-H--SSG-HAY--FSLKDNH-----SRIDAIIWKGTLNKIEFLPEEGIEFLVI-GKITTFPGSSKY 101 (529)
Q Consensus 34 ~~~v~gEis~~~~~-~--~sG-H~Y--f~lkd~~-----a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g~~~~y~~~g~~ 101 (529)
.|-|.|-|..++.. + ++| .|. |+|.|.. ..++|.+|+.....|+.-.+.||=|+++ .++..| +|..
T Consensus 38 ~VnviGVV~~~~~P~rs~~G~~Dy~~tl~I~D~S~~~~~~gl~v~iF~~~~e~LP~V~~vGDII~l~rvkvq~~--~g~~ 115 (170)
T d1qzga_ 38 IVNLFGIVKDFTPSRQSLHGTKDWVTTVYLWDPTCDTSSIGLQIHLFSKQGNDLPVIKQVGQPLLLHQITLRSY--RDRT 115 (170)
T ss_dssp EEEEEEEEEEEEEEEECSSTTCCEEEEEEEECTTSCTTSCCEEEEEEESSSSCSCCCCSTTCEEEEEEEEEEEE--TTEE
T ss_pred EEEEEEEEEECCCCEECCCCCCCEEEEEEEECCCCCCCCCCEEEEEECCCHHHCCCCCCCCCEEEEEEEEEEEE--CCCE
T ss_conf 89999999655686406899986899999976987777786699998999677998688897999988899998--7905
Q ss_pred EEEEEE
Q ss_conf 999997
Q gi|254780791|r 102 QIIIES 107 (529)
Q Consensus 102 ql~v~~ 107 (529)
|.+..+
T Consensus 116 q~v~~~ 121 (170)
T d1qzga_ 116 QGLSKD 121 (170)
T ss_dssp EEEEEE
T ss_pred EEEECC
T ss_conf 799607
No 40
>d1qvca_ b.40.4.3 (A:) ssDNA-binding protein {Escherichia coli [TaxId: 562]}
Probab=81.67 E-value=1.5 Score=20.87 Aligned_cols=68 Identities=15% Similarity=0.267 Sum_probs=48.4
Q ss_pred CCCCEEEEEEECC---CCCCCCCCEEE--EEEE------C--------CCCEEEEEEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 0171899999705---43568886279--9987------4--------89479999973521058668145988999999
Q gi|254780791|r 31 NLSHVCVRGEISG---YRGIHSSGHAY--FSLK------D--------NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 (529)
Q Consensus 31 ~~~~~~v~gEis~---~~~~~~sGH~Y--f~lk------d--------~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~ 91 (529)
++..|-+.|-|.. ++ +-.+|..+ |+|- | ...-+.|++|...+..+...++-|+.|.|.|+
T Consensus 4 ~mN~v~LiG~l~~dpe~r-~~~~G~~v~~f~va~~~~~~~~~~~~~~~~t~w~~v~~~g~~Ae~~~~~l~KG~~V~V~G~ 82 (145)
T d1qvca_ 4 GVNKVILVGNLGQDPEVR-YMPNGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQ 82 (145)
T ss_dssp CEEEEEEEEEESSCCEEE-CCSSSCCEEEEEEEECCCCSCCSSSSCCCCCEEEEEEEETHHHHHHHHHCCTTCEEEEEEE
T ss_pred CCEEEEEEEECCCCCEEE-ECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCCCCEEEEEEE
T ss_conf 602999999888798898-8899998999998724453445654432340477258732014567654035778999998
Q ss_pred EE--EEC-CCC
Q ss_conf 66--752-884
Q gi|254780791|r 92 IT--TFP-GSS 99 (529)
Q Consensus 92 ~~--~y~-~~g 99 (529)
+. .|. ..|
T Consensus 83 l~~~~~~~kdG 93 (145)
T d1qvca_ 83 LRTRKWTDQSG 93 (145)
T ss_dssp EEEEEECSSSS
T ss_pred EEEEEEECCCC
T ss_conf 87734587999
No 41
>d1b8aa1 b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]}
Probab=81.51 E-value=1.6 Score=20.82 Aligned_cols=76 Identities=14% Similarity=0.168 Sum_probs=55.4
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCC----CCCCCCCCCEEEEEEEEEEECC--CCEEEEEEE
Q ss_conf 7189999970543568886279998748947999997352105----8668145988999999667528--843799999
Q gi|254780791|r 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK----IEFLPEEGIEFLVIGKITTFPG--SSKYQIIIE 106 (529)
Q Consensus 33 ~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~----~~~~~~~G~~v~~~g~~~~y~~--~g~~ql~v~ 106 (529)
..|+|.|=|.+.|. .++=.++.|.|..+.|.|++-+..... .--.+..|.-|.+.|.+. -.| .++|-+.++
T Consensus 17 ~~V~v~Gwv~~~R~--~g~i~Fi~LrD~sg~iQ~v~~~~~~~~~~~~~~~~l~~es~v~V~G~v~-~~~~~~~~iEi~v~ 93 (103)
T d1b8aa1 17 QKVKVAGWVWEVKD--LGGIKFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVN-FTPKAKLGFEILPE 93 (103)
T ss_dssp CEEEEEEEEEEEEE--ETTEEEEEEEETTEEEEEEEETTTSCHHHHHHGGGCCTTCEEEEEEEEE-ECTTSTTSEEEEEE
T ss_pred CEEEEEEEEEHHCC--CCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEEEEE-ECCCCCCCEEEEEE
T ss_conf 99999999933141--7996989999387810699703011112466786388642999998999-78999825899965
Q ss_pred EEEEC
Q ss_conf 71016
Q gi|254780791|r 107 SLIPS 111 (529)
Q Consensus 107 ~i~~~ 111 (529)
.++.-
T Consensus 94 ~i~il 98 (103)
T d1b8aa1 94 KIVVL 98 (103)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 99999
No 42
>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}
Probab=80.59 E-value=1.7 Score=20.58 Aligned_cols=77 Identities=19% Similarity=0.154 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC-CC-CH---HHHHHC---CHH----------HHHHHHHHCCCEEEEEE
Q ss_conf 03679999999974100357677758999516-88-84---442200---769----------99999974890488520
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARG-GG-SI---EDLWHF---NDE----------MIVRAIANSSIPIISAI 247 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RG-GG-S~---eDL~~F---N~e----------~laraI~~~~iPVisgI 247 (529)
...++..+|..+.... .+-+||| +| |+ .+ -||-.| +++ .+.+++..||.|||++|
T Consensus 31 ~~~~l~~~l~~~~~d~------~v~~vvl-~g~g~~~Fs~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kpvIa~v 103 (249)
T d1sg4a1 31 FLTELVISLEKLENDK------SFRGVIL-TSDRPGVFSAGLDLTEMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAI 103 (249)
T ss_dssp HHHHHHHHHHHHHHCT------TCCEEEE-EESSTEESCCEECGGGGSSCCHHHHHHHHHHHHHHHHHHHTCSSEEEEEE
T ss_pred HHHHHHHHHHHHHHCC------CCCEEEE-EECCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH
T ss_conf 9999999999997299------9668999-85343067426543322134533221111025788775303763200001
Q ss_pred -CCCCCCH-HHHHHHCCCCCCCHH
Q ss_conf -5777525-898864123777214
Q gi|254780791|r 248 -GHETDWT-LADYAADLRAPTPTG 269 (529)
Q Consensus 248 -GHE~D~T-l~D~VAD~Ra~TPTa 269 (529)
||=.--- -.=+.+|.|..++++
T Consensus 104 ~G~a~GgG~~lal~~D~~ia~~~a 127 (249)
T d1sg4a1 104 NGACPAGGCLVALTCDYRILADNP 127 (249)
T ss_dssp CEEBCHHHHHHHTTSSEEEEECCT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 023544443321112411120133
No 43
>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=77.75 E-value=0.65 Score=24.21 Aligned_cols=77 Identities=17% Similarity=0.159 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC-H---HHHHHC---CH--------HHHHHHHHHCCCEEEEEE-CC
Q ss_conf 03679999999974100357677758999516888-4---442200---76--------999999974890488520-57
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS-I---EDLWHF---ND--------EMIVRAIANSSIPIISAI-GH 249 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS-~---eDL~~F---N~--------e~laraI~~~~iPVisgI-GH 249 (529)
-..+|..+|+.++... .+.+||| +|+|- + -||-.+ .. ..+..++..||.|||++| ||
T Consensus 35 ~~~~l~~~l~~~~~d~------~v~~vvl-~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~kPvIaav~G~ 107 (260)
T d1mj3a_ 35 LIEELNQALETFEEDP------AVGAIVL-TGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGY 107 (260)
T ss_dssp HHHHHHHHHHHHHHCT------TCCEEEE-ECCSSEEECCBCHHHHTTCCHHHHHHC--CCGGGGGGGCSSCEEEEECSE
T ss_pred HHHHHHHHHHHHHHCC------CCCEEEE-ECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCE
T ss_conf 9999999999997598------8655898-13543333210166652121245667899999887414998699998375
Q ss_pred CCC-CHHHHHHHCCCCCCCHH
Q ss_conf 775-25898864123777214
Q gi|254780791|r 250 ETD-WTLADYAADLRAPTPTG 269 (529)
Q Consensus 250 E~D-~Tl~D~VAD~Ra~TPTa 269 (529)
=.= =.-+=+.+|+|..++.+
T Consensus 108 a~GgG~~lal~~D~~ia~~~a 128 (260)
T d1mj3a_ 108 ALGGGCELAMMCDIIYAGEKA 128 (260)
T ss_dssp EETHHHHHHHHSSEEEEETTC
T ss_pred EEHHHHHHHHHCCEEEECCCC
T ss_conf 719889999979999974998
No 44
>d1no5a_ d.218.1.5 (A:) Hypothetical protein HI0073 {Haemophilus influenzae [TaxId: 727]}
Probab=77.17 E-value=2 Score=19.78 Aligned_cols=63 Identities=16% Similarity=0.163 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHH
Q ss_conf 589999998630597-5899972100111103679999999974100357677758999516888444220076999999
Q gi|254780791|r 157 AVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 (529)
Q Consensus 157 a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~lara 235 (529)
-.+.-+..++++.+| ..+++|.+.+.|+.-+.| .+|+.|+.-++-+.++++ .++..
T Consensus 7 e~l~~i~~il~~~~~~~~v~LFGS~arg~~~~~S------------------DiDl~I~~~~~~~~~~~~-----~l~~~ 63 (100)
T d1no5a_ 7 EELAIVKTILQQLVPDYTVWAFGSRVKGKAKKYS------------------DLDLAIISEEPLDFLARD-----RLKEA 63 (100)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEGGGTTTCCCTTC------------------CEEEEEECSSCCCHHHHH-----HHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC------------------CCEEEEEECCCCCHHHHH-----HHHHH
T ss_conf 9999999999971999589998987789868888------------------813999818999999999-----99999
Q ss_pred HHHCCCE
Q ss_conf 9748904
Q gi|254780791|r 236 IANSSIP 242 (529)
Q Consensus 236 I~~~~iP 242 (529)
+..+.+|
T Consensus 64 l~~~~~~ 70 (100)
T d1no5a_ 64 FSESDLP 70 (100)
T ss_dssp HHHSCCS
T ss_pred HHHCCCC
T ss_conf 9962899
No 45
>d3e2ba1 d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=69.84 E-value=2.1 Score=19.66 Aligned_cols=49 Identities=14% Similarity=0.399 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHCCCCEE--EEEEECCCCCC--CCCC-EEEEEEECCCCEEEEEEECC
Q ss_conf 99999999999740017189--99997054356--8886-27999874894799999735
Q gi|254780791|r 17 VSELSYHLKHIVESNLSHVC--VRGEISGYRGI--HSSG-HAYFSLKDNHSRIDAIIWKG 71 (529)
Q Consensus 17 vs~l~~~i~~~l~~~~~~~~--v~gEis~~~~~--~~sG-H~Yf~lkd~~a~i~~~~~~~ 71 (529)
-.++...||..++..|+..| |+|+ ||-++ |..| ++||.+ ..+...+||+
T Consensus 33 ~~diA~~IK~~~D~kyg~~WhcIVG~--~Fgs~vthe~~~~i~F~~----g~~~~Ll~Kt 86 (87)
T d3e2ba1 33 EKDIAAYIKKEFDKKYNPTWHCIVGR--NFGSYVTHETRHFIYFYL----GQVAILLFKS 86 (87)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEEEEES--SCEEEEEEETTEEEEEEE----TTEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECC--CEEEEEEECCCCEEEEEE----CCEEEEEEEC
T ss_conf 89999999998887649943999989--705789964994999997----9999999953
No 46
>d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]}
Probab=68.11 E-value=3.1 Score=18.14 Aligned_cols=91 Identities=20% Similarity=0.248 Sum_probs=46.2
Q ss_pred CCEEEEEECCCHHHH--HHHHHHHHHC-----CCEE--EEEEECCCCCCCHHHHHHHHHHHHHHHCCCC-CCCCCCEEEE
Q ss_conf 528999847842589--9999986305-----9758--9997210011110367999999997410035-7677758999
Q gi|254780791|r 145 PKIIAVITSPTGAVI--RDILQRISCR-----FPLR--VIIFPVKVQGDECPKEIANAILQLNTLKEGR-TCPRPDIIIL 214 (529)
Q Consensus 145 p~~i~vits~~~a~~--~D~~~~~~~r-----~p~~--~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~-~~~~~D~iii 214 (529)
.+++.|||-++-.-+ ..+...+... ++.. ++..|. ||.+ +++-.+....+.+.+.+ ...+-| +||
T Consensus 33 ~~~~~ivtD~~v~~l~~~~v~~~l~~~~~~~~~~~~~~~~~~~~---gE~~-Ks~~~~~~i~~~~~~~~~~~~r~d-~Ii 107 (389)
T d1sg6a_ 33 STTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPP---GEVS-KSRQTKADIEDWMLSQNPPCGRDT-VVI 107 (389)
T ss_dssp CSEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECS---SGGG-SSHHHHHHHHHHHHTSSSCCCTTC-EEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC---CCCC-CCHHHHHHHHHHHHHCCCCCCCCC-EEE
T ss_conf 98189997896589899999999987074214676248998169---8452-899999999999996288767775-699
Q ss_pred ECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 5168884442200769999999748904885
Q gi|254780791|r 215 ARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 215 ~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
+=|||..-|+.-| +-+.|.-.+|.|.
T Consensus 108 aiGGG~v~D~ak~-----~A~~y~rgi~~i~ 133 (389)
T d1sg6a_ 108 ALGGGVIGDLTGF-----VASTYMRGVRYVQ 133 (389)
T ss_dssp EEESHHHHHHHHH-----HHHHGGGCCEEEE
T ss_pred EECCCHHHHHHHH-----HHHHHHCCCCEEE
T ss_conf 9656347788999-----9999855876367
No 47
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=66.22 E-value=3.4 Score=17.86 Aligned_cols=69 Identities=12% Similarity=0.289 Sum_probs=37.6
Q ss_pred HHHHHHHHHHCC-CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC-CCCCHHHHHHCCHHHHHHH-
Q ss_conf 999999863059-7589997210011110367999999997410035767775899951-6888444220076999999-
Q gi|254780791|r 159 IRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILAR-GGGSIEDLWHFNDEMIVRA- 235 (529)
Q Consensus 159 ~~D~~~~~~~r~-p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~R-GGGS~eDL~~FN~e~lara- 235 (529)
+.++...+.... ++++. .+.| .+...|++.++.. ++|+||+++ |-|.++.++ |. .++..
T Consensus 85 l~~~~~~~~~~~~~~~~~----v~~G-~~~~~I~~~a~~~----------~~dlIV~G~~g~~~~~~~~-lG--Sv~~~v 146 (171)
T d2gm3a1 85 LEFFVNKCHEIGVGCEAW----IKTG-DPKDVICQEVKRV----------RPDFLVVGSRGLGRFQKVF-VG--TVSAFC 146 (171)
T ss_dssp HHHHHHHHHHHTCEEEEE----EEES-CHHHHHHHHHHHH----------CCSEEEEEECCCC-----------CHHHHH
T ss_pred HHHHHHHHHHCCCCEEEE----EEEC-CHHHHHHHHHHHC----------CCCEEEECCCCCCCCCCCC-CC--CHHHHH
T ss_conf 999999988639944799----9827-8699999987644----------7757974367753545574-48--699999
Q ss_pred HHHCCCEEEE
Q ss_conf 9748904885
Q gi|254780791|r 236 IANSSIPIIS 245 (529)
Q Consensus 236 I~~~~iPVis 245 (529)
+-.++.||+.
T Consensus 147 i~~~~cpVlv 156 (171)
T d2gm3a1 147 VKHAECPVMT 156 (171)
T ss_dssp HHHCSSCEEE
T ss_pred HHCCCCCEEE
T ss_conf 8389989899
No 48
>d2ghra1 c.23.16.8 (A:17-297) Homoserine O-succinyltransferase HTS (MetA) {Bacillus cereus [TaxId: 1396]}
Probab=66.10 E-value=3.4 Score=17.84 Aligned_cols=78 Identities=18% Similarity=0.245 Sum_probs=33.8
Q ss_pred CCCEEEEEEC-CC-HHHHHHHHHHHHHCCCE--EEE-EEECCCCCCCHHHHHHHHH-HHHHHHCCCCCCCCCCEEEEECC
Q ss_conf 6528999847-84-25899999986305975--899-9721001111036799999-99974100357677758999516
Q gi|254780791|r 144 IPKIIAVITS-PT-GAVIRDILQRISCRFPL--RVI-IFPVKVQGDECPKEIANAI-LQLNTLKEGRTCPRPDIIILARG 217 (529)
Q Consensus 144 ~p~~i~vits-~~-~a~~~D~~~~~~~r~p~--~~~-~~p~~vQG~~a~~~i~~ai-~~~~~~~~~~~~~~~D~iii~RG 217 (529)
=|.+|||+-- |+ .+.=..|+|.+. ..|+ ++. +++......+.+.+.+... ..++.. ....||.+||.
T Consensus 18 rpL~I~iLNlMP~k~~TE~qf~rll~-~~~~qv~~~~~~~~~~~~~~~~~~~~~~~y~~~~~i----~~~~fDglIIT-- 90 (281)
T d2ghra1 18 RALKIAILNLMPTKQETEAQLLRLIG-NTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDI----ENEKFDGLIIT-- 90 (281)
T ss_dssp CCEEEEEECCCSSHHHHHHHHHHHTT-SSSSCEEEEEECCCC------------CCEECHHHH----TTCCEEEEEEC--
T ss_pred CEEEEEEEECCCCCHHHHHHHHHHHC-CCCCEEEEEEEEECCCCCCCCCHHHHHHCCHHHHHH----HCCCCCEEEEE--
T ss_conf 31579999169960556999999866-884328999866323226774287787553538875----10567779994--
Q ss_pred CCCHHHHHHCCH
Q ss_conf 888444220076
Q gi|254780791|r 218 GGSIEDLWHFND 229 (529)
Q Consensus 218 GGS~eDL~~FN~ 229 (529)
||..+.+.|.+
T Consensus 91 -Gap~~~~~fed 101 (281)
T d2ghra1 91 -GAPVETLSFEE 101 (281)
T ss_dssp -CCSCTTSCGGG
T ss_pred -CCCCCCCCCCC
T ss_conf -89877656111
No 49
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=63.46 E-value=3.7 Score=17.46 Aligned_cols=43 Identities=9% Similarity=0.094 Sum_probs=34.6
Q ss_pred HHCCCEEEEECCCCCEECCHHHCCCCCEEEEEEECEEEEEEEEECC
Q ss_conf 7314619998489889577789299986999991109999995057
Q gi|254780791|r 457 TLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 (529)
Q Consensus 457 ~L~RGYaiv~~~~GkiI~s~~~l~~gd~i~i~l~DG~v~a~V~~k~ 502 (529)
..+.|...| ||+.++....++.||.|++.+..-.....|.+-.
T Consensus 26 ~i~~G~V~v---Ng~~vKps~~vk~GDvI~i~~~~~~~~i~V~~l~ 68 (104)
T d1dm9a_ 26 MIEGGKVHY---NGQRSKPSKIVELNATLTLRQGNDERTVIVKAIT 68 (104)
T ss_dssp HHHTTCEEE---TTEECCTTCBCCTTCEEEEEETTEEEEEEECEEE
T ss_pred HHHCCCEEE---CCEECCCCCCCCCCCEEEEEECCEEEEEEEEECC
T ss_conf 998397154---8741455556899999999868948899998761
No 50
>d1a9xb2 c.23.16.1 (B:1653-1880) Carbamoyl phosphate synthetase, small subunit C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=62.73 E-value=3.8 Score=17.36 Aligned_cols=83 Identities=20% Similarity=0.280 Sum_probs=55.5
Q ss_pred CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
Q ss_conf 16310265289998478425899999986305975899972100111103679999999974100357677758999516
Q gi|254780791|r 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG 217 (529)
Q Consensus 138 k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RG 217 (529)
.++-+.-..+|+||-= |.=+. +++.++++. +.+.++|... .+.+ +... +||.|||.=|
T Consensus 32 ~~~~~~~~~~i~~~D~--G~k~~-ilr~l~~~~-~~~~v~p~~~----~~~~-------i~~~-------~pdgivlS~G 89 (228)
T d1a9xb2 32 AKKEDELPFHVVAYDF--GAKRN-ILRMLVDRG-CRLTIVPAQT----SAED-------VLKM-------NPDGIFLSNG 89 (228)
T ss_dssp CCCGGGCCEEEEEEES--SCCHH-HHHHHHHTT-EEEEEEETTC----CHHH-------HHTT-------CCSEEEECCC
T ss_pred CCCCCCCCCEEEEEEC--CCCHH-HHHHHHHCC-CEEEECCCCC----CHHH-------HHHC-------CCCEEEEECC
T ss_conf 4557787616999957--87277-676787559-6578758889----9999-------9844-------9999998288
Q ss_pred CCCHHHHHHCCHHHHHHHHHHCCCEEE
Q ss_conf 888444220076999999974890488
Q gi|254780791|r 218 GGSIEDLWHFNDEMIVRAIANSSIPII 244 (529)
Q Consensus 218 GGS~eDL~~FN~e~laraI~~~~iPVi 244 (529)
=|+.+|.- +.-.+++.++...+||+
T Consensus 90 Pg~P~~~~--~~~~~~~~~~~~~iPIL 114 (228)
T d1a9xb2 90 PGDPAPCD--YAITAIQKFLETDIPVF 114 (228)
T ss_dssp SBCSTTCH--HHHHHHHHHTTSCCCEE
T ss_pred CCCCCCCH--HHHHHHHHHHHCCCCEE
T ss_conf 77653211--27899999981799889
No 51
>d1l0wa1 b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]}
Probab=62.30 E-value=3.9 Score=17.30 Aligned_cols=78 Identities=10% Similarity=0.118 Sum_probs=54.2
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCC-CCCCCCCCCEEEEEEEEEE------ECCCCEEEEEE
Q ss_conf 7189999970543568886279998748947999997352105-8668145988999999667------52884379999
Q gi|254780791|r 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK-IEFLPEEGIEFLVIGKITT------FPGSSKYQIII 105 (529)
Q Consensus 33 ~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~-~~~~~~~G~~v~~~g~~~~------y~~~g~~ql~v 105 (529)
..|.|.|=|.+.|. .++=.++.|.|..+.+.|++-...... .--.+..+.-|.+.|.|-- --+.|.|-+.+
T Consensus 17 ~~V~l~GWV~~~R~--~g~i~Fi~LRD~~G~iQ~v~~~~~~~~~~~~~l~~Es~I~V~G~V~~r~~~n~~~~tG~iEi~v 94 (104)
T d1l0wa1 17 EEVVLEGWVNRRRD--LGGLIFLDLRDREGLVQLVAHPASPAYATAERVRPEWVVRAKGLVRLRPEPNPRLATGRVEVEL 94 (104)
T ss_dssp CEEEEEEEEEEEEE--CSSCEEEEEEETTEEEEEEECTTSTTHHHHTTCCTTCEEEEEEEEEECSSCCTTSTTTTEEEEE
T ss_pred CEEEEEEEEEEHHC--CCCEEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 98999999975211--8970999998798856876063154788986338651899999994077568789998799999
Q ss_pred EEEEECC
Q ss_conf 9710168
Q gi|254780791|r 106 ESLIPSG 112 (529)
Q Consensus 106 ~~i~~~g 112 (529)
+.++.-+
T Consensus 95 ~~i~iL~ 101 (104)
T d1l0wa1 95 SALEVLA 101 (104)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
T ss_conf 6999997
No 52
>d1o1ya_ c.23.16.1 (A:) Hypothetical protein TM1158 {Thermotoga maritima [TaxId: 2336]}
Probab=61.84 E-value=3.9 Score=17.23 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=17.0
Q ss_pred CCEEEEECCCCCHHH--H--HHCCHHHHHHHHHHCCCEEE
Q ss_conf 758999516888444--2--20076999999974890488
Q gi|254780791|r 209 PDIIILARGGGSIED--L--WHFNDEMIVRAIANSSIPII 244 (529)
Q Consensus 209 ~D~iii~RGGGS~eD--L--~~FN~e~laraI~~~~iPVi 244 (529)
||.|||.=|.+|.-| - |--++..+.+.+.+..+||+
T Consensus 49 ~d~iii~Ggp~~~~d~~~~~~~~~~~~~i~~~~~~~~Pil 88 (230)
T d1o1ya_ 49 YSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFL 88 (230)
T ss_dssp CSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEE
T ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEE
T ss_conf 7889982997655641004555789999999997311078
No 53
>d1knya2 d.218.1.1 (A:1-125) Kanamycin nucleotidyltransferase (KNTase), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=61.59 E-value=2.8 Score=18.60 Aligned_cols=47 Identities=9% Similarity=0.184 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHCCC---EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 589999998630597---58999721001111036799999999741003576777589995168884
Q gi|254780791|r 157 AVIRDILQRISCRFP---LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 157 a~~~D~~~~~~~r~p---~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
..++.|...+.++|+ ..|.||.+.+.|+..+.| .+|++|+.+++...
T Consensus 14 ~~~~~~~~~i~~~~~~~v~~i~L~GS~arg~~~~~S------------------DiDl~vv~~~~~~~ 63 (125)
T d1knya2 14 KIVHEIKERILDKYGDDVKAIGVYGSLGRQTDGPYS------------------DIEMMCVMSTEEAE 63 (125)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEEHHHHHTCCCTTC------------------CEEEEEEESSTTCE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC------------------CEEEEEEECCCCCC
T ss_conf 999999999999837446899998741369999898------------------74799997799863
No 54
>d1nnxa_ b.40.10.1 (A:) Hypothetical protein YgiW {Escherichia coli [TaxId: 562]}
Probab=59.13 E-value=4.3 Score=16.87 Aligned_cols=69 Identities=17% Similarity=0.239 Sum_probs=51.9
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEE
Q ss_conf 718999997054356888627999874894799999735210586681459889999996675288437999997101
Q gi|254780791|r 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 (529)
Q Consensus 33 ~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~~ 110 (529)
..|-++|.|..- =||=+|.++|....|..-|=...+......| +++|.+.|.++- . ...-.+.|..|+.
T Consensus 37 t~V~L~G~Iv~~-----l~~d~Y~F~D~TG~I~VeId~~~w~g~~v~p--~~kV~i~GevDk-~-~~~~eIdV~~I~~ 105 (106)
T d1nnxa_ 37 TWVTLRGNIVER-----ISDDLYVFKDASGTINVDIDHKRWNGVTVTP--KDTVEIQGEVDK-D-WNSVEIDVKQIRK 105 (106)
T ss_dssp EEEEEEEEEEEE-----EETTEEEEEETTEEEEEECCGGGSTTCCCCT--TSCEEEEEEEEE-E-TTEEEEEEEEEEE
T ss_pred CEEEEEEEEEEE-----ECCCEEEEECCCCCEEEEECHHHCCCCCCCC--CCEEEEEEEECC-C-CCCEEEEEEEEEE
T ss_conf 839999999978-----1895389978987699997844428955699--998999999948-9-9961899999997
No 55
>d1js1x1 c.78.1.1 (X:1-163) Transcarbamylase-like protein {Bacteroides fragilis [TaxId: 817]}
Probab=59.07 E-value=4.3 Score=16.86 Aligned_cols=106 Identities=20% Similarity=0.197 Sum_probs=54.6
Q ss_pred CCCCEEEEEECCCHHHH-HHHHHHHHHCCCEEE-EEEECC------------CCCCCHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 26528999847842589-999998630597589-997210------------0111103679999999974100357677
Q gi|254780791|r 143 FIPKIIAVITSPTGAVI-RDILQRISCRFPLRV-IIFPVK------------VQGDECPKEIANAILQLNTLKEGRTCPR 208 (529)
Q Consensus 143 ~~p~~i~vits~~~a~~-~D~~~~~~~r~p~~~-~~~p~~------------vQG~~a~~~i~~ai~~~~~~~~~~~~~~ 208 (529)
.-.+.||.+=-+.+--= -=| .+...+-+..+ .+-+.. +|+ +-.+++...++.++.+
T Consensus 34 l~~K~v~~lF~epSTRTR~SF-e~A~~~LGg~~i~l~~~~ss~~~~~~~~~~~~~-~kgEs~~Dt~~vls~~-------- 103 (163)
T d1js1x1 34 GRNKTLLMIFFNSSLRTRLST-QKAALNLGMNVIVLDINQGAWKLETERGVIMDG-DKPEHLLEAIPVMGCY-------- 103 (163)
T ss_dssp TTTCEEEEEESSCCSHHHHHH-HHHHHHTTCEEEEEECCGGGCCEECCSSCCCCS-SCCEEHHHHHHHHHHT--------
T ss_pred CCCCEEEEEECCCCHHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCCCCEECC-CCCCCHHHHHHHHHHH--------
T ss_conf 689989999568835678899-999985487347625665532223454300037-6777899999999974--------
Q ss_pred CCEEEEECCCCCHHHHHH-CCHHHHHHHHHHCCCEEEEEECCC--CCCHHHHHH
Q ss_conf 758999516888444220-076999999974890488520577--752589886
Q gi|254780791|r 209 PDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHE--TDWTLADYA 259 (529)
Q Consensus 209 ~D~iii~RGGGS~eDL~~-FN~e~laraI~~~~iPVisgIGHE--~D~Tl~D~V 259 (529)
+| +|++|+-....+.+. .++..+-...-.+++|||-|-|-. .=-+|+|+.
T Consensus 104 ~D-~iviR~~~~~~~~~~~~~~~~~~~~a~~s~vPVINg~~~~~HPtQ~L~Dl~ 156 (163)
T d1js1x1 104 CD-IIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEAATRHPLQSFADLI 156 (163)
T ss_dssp CS-EEEEECCCCSSCHHHHHHTHHHHHHHHHSSSCEEESSCSSCCHHHHHHHHH
T ss_pred CC-EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHH
T ss_conf 96-898965533100333220458999998679888848999876489999999
No 56
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=58.87 E-value=4.4 Score=16.84 Aligned_cols=109 Identities=19% Similarity=0.142 Sum_probs=62.1
Q ss_pred CCEEEEEEC-CCHHHHHHHHHHHHH---CCCEEEEEE----------------ECCCCC----------------CCHHH
Q ss_conf 528999847-842589999998630---597589997----------------210011----------------11036
Q gi|254780791|r 145 PKIIAVITS-PTGAVIRDILQRISC---RFPLRVIIF----------------PVKVQG----------------DECPK 188 (529)
Q Consensus 145 p~~i~vits-~~~a~~~D~~~~~~~---r~p~~~~~~----------------p~~vQG----------------~~a~~ 188 (529)
.|||||+|| -...++..+++-+-+ +.+.+|+-+ +..|.+ -....
T Consensus 2 mkrIgIltsGG~~pg~Na~i~~~v~~~~~~~~~v~g~~~G~~Gl~~~~~~~l~~~~v~~~~~~gGs~lgt~R~~~~~~~~ 81 (320)
T d1pfka_ 2 IKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDEN 81 (320)
T ss_dssp CCEEEEEECSSCCTTHHHHHHHHHHHHHHTTCEEEEESTHHHHHHTTCEEEECSGGGTTCTTCCSCTTCCCCCGGGGSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf 86499986688866889999999999987899899994668887279857299999988984699852314788776655
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCH
Q ss_conf 79999999974100357677758999516888444220076999999974890488520577752589886412377721
Q gi|254780791|r 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268 (529)
Q Consensus 189 ~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPT 268 (529)
...++++.+... +.|.+|++=|.||..-- ..+++..+||| ||-.-+|--|.- .|...=-.|
T Consensus 82 ~~~~~~~~l~~~-------~I~~li~iGG~~s~~~a---------~~l~~~~~~vi-giPkTIDNDl~~--td~s~Gf~T 142 (320)
T d1pfka_ 82 IRAVAIENLKKR-------GIDALVVIGGDGSYMGA---------MRLTEMGFPCI-GLPGTIDNDIKG--TDYTIGFFT 142 (320)
T ss_dssp HHHHHHHHHHHT-------TCCEEEEEECHHHHHHH---------HHHHHTTCCEE-EEEBCTTCCCTT--CSCCBTHHH
T ss_pred HHHHHHHHHHHC-------CCCEEEEECCCHHHHHH---------HHHHHCCCCEE-EEEEEECCCCCC--CCCCCCHHH
T ss_conf 550388899876-------99889996796589999---------99875166522-230143178888--678883488
Q ss_pred HHHH
Q ss_conf 4567
Q gi|254780791|r 269 GAAE 272 (529)
Q Consensus 269 aAAE 272 (529)
|+..
T Consensus 143 A~~~ 146 (320)
T d1pfka_ 143 ALST 146 (320)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 57
>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}
Probab=58.58 E-value=4.4 Score=16.80 Aligned_cols=62 Identities=18% Similarity=0.203 Sum_probs=25.6
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH-----HHHHHCCHHHHHHHH-HHCCCEEEEEECCC
Q ss_conf 1111036799999999741003576777589995168884-----442200769999999-74890488520577
Q gi|254780791|r 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI-----EDLWHFNDEMIVRAI-ANSSIPIISAIGHE 250 (529)
Q Consensus 182 QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~-----eDL~~FN~e~laraI-~~~~iPVisgIGHE 250 (529)
.|....+.|+++++.+.+.. ..+|++.-|||+. ..|+.......+... ....||+|+.|..-
T Consensus 112 ~g~~~~~Ki~~a~e~A~~~~-------lPlI~~~~sgG~r~~e~~~sl~~~~~~~~~~~~~~~~~vP~I~v~~g~ 179 (263)
T d2f9yb1 112 MGSVVGARFVRAVEQALEDN-------CPLICFSASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDP 179 (263)
T ss_dssp BCTHHHHHHHHHHHHHHHHT-------CCEEEEEEESSBCGGGTHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHCC-------CCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf 56321567758999999709-------986888447874334431021010357899999986799659996178
No 58
>d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]}
Probab=56.12 E-value=4.8 Score=16.49 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=39.2
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH---
Q ss_conf 52899984784258999999863059758999721001111036799999999741003576777589995168884---
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI--- 221 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~--- 221 (529)
|-|||||.=+ |. ++.+.+.+.+ ..+++.+.. -+.+ ..++|.||| =| |+.
T Consensus 6 ~mkIgii~~~-Gn-~~s~~~al~~-~G~~~~~v~-------~~~~----------------l~~~D~lIl-PG-G~~~~~ 57 (202)
T d1q7ra_ 6 NMKIGVLGLQ-GA-VREHVRAIEA-CGAEAVIVK-------KSEQ----------------LEGLDGLVL-PG-GESTTM 57 (202)
T ss_dssp CCEEEEESCG-GG-CHHHHHHHHH-TTCEEEEEC-------SGGG----------------GTTCSEEEE-CC-CCHHHH
T ss_pred CCEEEEEECC-CC-HHHHHHHHHH-CCCCEEEEC-------CHHH----------------HHCCCEEEE-CC-CCCHHH
T ss_conf 9879999789-98-9999999998-799299989-------9899----------------712898998-79-884799
Q ss_pred -HHHHHCCHHHHHHHHHHCCCEEE
Q ss_conf -44220076999999974890488
Q gi|254780791|r 222 -EDLWHFNDEMIVRAIANSSIPII 244 (529)
Q Consensus 222 -eDL~~FN~e~laraI~~~~iPVi 244 (529)
..||...-.+..+...+...||+
T Consensus 58 ~~~l~~~~l~~~I~~~~~~gkPiL 81 (202)
T d1q7ra_ 58 RRLIDRYGLMEPLKQFAAAGKPMF 81 (202)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEE
T ss_conf 987666678998865222231466
No 59
>d2k49a2 d.348.1.1 (A:1-58) Uncharacterized protein SO3888 {Shewanella oneidensis [TaxId: 70863]}
Probab=56.03 E-value=4.3 Score=16.93 Aligned_cols=18 Identities=22% Similarity=0.250 Sum_probs=14.9
Q ss_pred CCCEEEEEEECCCCEEEE
Q ss_conf 886279998748947999
Q gi|254780791|r 49 SSGHAYFSLKDNHSRIDA 66 (529)
Q Consensus 49 ~sGH~Yf~lkd~~a~i~~ 66 (529)
++|+|||.||+.+.+|=+
T Consensus 11 ~~g~~rf~Lka~NGevIa 28 (58)
T d2k49a2 11 SNDQFKFVLKAGNGEVIL 28 (58)
T ss_dssp TTSCEEEEEECSSSCEEE
T ss_pred CCCCEEEEEECCCCCEEE
T ss_conf 899899999919999998
No 60
>d1qdlb_ c.23.16.1 (B:) Anthranilate synthase GAT subunit, TrpG {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=56.00 E-value=4.8 Score=16.47 Aligned_cols=42 Identities=26% Similarity=0.451 Sum_probs=29.7
Q ss_pred CCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE-EECCC
Q ss_conf 7589995168884442200769999999748904885-20577
Q gi|254780791|r 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS-AIGHE 250 (529)
Q Consensus 209 ~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis-gIGHE 250 (529)
+|.||+.=|+||.+|...+.........+...+||+- --||.
T Consensus 46 ~~gvilsgGp~~~~~~~~~~~~~~i~~~~~~~~PiLGIClG~Q 88 (195)
T d1qdlb_ 46 PDRLIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLGHQ 88 (195)
T ss_dssp CSEEEECCCSSCTTSHHHHTTHHHHHHHHTTTSCEEEETHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEHHHH
T ss_conf 8830027987764110013432666653037987788613353
No 61
>d1vlva1 c.78.1.1 (A:1-152) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}
Probab=55.06 E-value=5 Score=16.35 Aligned_cols=95 Identities=16% Similarity=0.178 Sum_probs=49.9
Q ss_pred CCEEEEEECCCHH-HHHHHHHHHHHCCCEEEE-EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHH
Q ss_conf 5289998478425-899999986305975899-97210011110367999999997410035767775899951688844
Q gi|254780791|r 145 PKIIAVITSPTGA-VIRDILQRISCRFPLRVI-IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 (529)
Q Consensus 145 p~~i~vits~~~a-~~~D~~~~~~~r~p~~~~-~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~e 222 (529)
-+.|+.+=-+.+- -.-=| .....+-+..++ +-+..++- +.-+++...+..+..+ +|+|| +|+.
T Consensus 46 gk~v~llF~epSTRTR~SF-e~A~~~LG~~~i~l~~~~s~~-~~gEs~~Dt~~~ls~~--------~d~iv-~R~~---- 110 (152)
T d1vlva1 46 GMTLAMIFEKRSTRTRLAF-ETAFAEEGGHPIFLSPNDIHL-GAKESLEDTARVLGRM--------VDAIM-FRGY---- 110 (152)
T ss_dssp TCEEEEEESSCCHHHHHHH-HHHHHHTTCEEEEECTTTCCT-TTSSCHHHHHHHHHTT--------CSEEE-EESS----
T ss_pred CCEEEEEEECCCCCCHHHE-EHHHHHCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHC--------CCCEE-EEEC----
T ss_conf 9767888605764200010-000444256510013420134-6541488999987613--------65179-9825----
Q ss_pred HHHHCCHHHHHHHHHHCCCEEEEEEC-CC-CCCHHHHHH
Q ss_conf 42200769999999748904885205-77-752589886
Q gi|254780791|r 223 DLWHFNDEMIVRAIANSSIPIISAIG-HE-TDWTLADYA 259 (529)
Q Consensus 223 DL~~FN~e~laraI~~~~iPVisgIG-HE-~D~Tl~D~V 259 (529)
++..+......+++|||-|=| || .=-.|+|+-
T Consensus 111 -----~~~~~~~~a~~~~~PviNg~~~~~HPtQ~L~D~~ 144 (152)
T d1vlva1 111 -----KQETVEKLAEYSGVPVYNGLTDEFHPTQALADLM 144 (152)
T ss_dssp -----CHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHH
T ss_pred -----CCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf -----7663454024465269938998887039999999
No 62
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=55.03 E-value=5 Score=16.35 Aligned_cols=52 Identities=25% Similarity=0.424 Sum_probs=33.2
Q ss_pred CCEEEEECCCCCHH----HHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCHH
Q ss_conf 75899951688844----42200769999999748904885205777525898864123777214
Q gi|254780791|r 209 PDIIILARGGGSIE----DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 (529)
Q Consensus 209 ~D~iii~RGGGS~e----DL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPTa 269 (529)
.|.|+|+||--+.| .+...-.+.+.++. ....|||+|-- +++ +=...|.||-
T Consensus 156 sDgimIaRGDLgvei~~e~vp~~Qk~Ii~~~~-~~gkpvivATq------~Le--SM~~~~~PTR 211 (265)
T d1a3xa2 156 TDGVMVARGDLGIEIPAPEVLAVQKKLIAKSN-LAGKPVICATQ------MLE--SMTYNPRPTR 211 (265)
T ss_dssp CSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHH-HHTCCEEEESS------SSG--GGGTCSSCCH
T ss_pred CCEEEEECCCHHHHCCHHHHHHHHHHHHHHHH-HCCCCEEEHHH------HHH--HHCCCCCCCH
T ss_conf 55158872430232247788898899999999-71994885465------323--2135999868
No 63
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.83 E-value=5 Score=16.33 Aligned_cols=50 Identities=12% Similarity=0.210 Sum_probs=30.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC-CCHHHH-HHCCHHHHHHHHHHCCCEEEE
Q ss_conf 1111036799999999741003576777589995168-884442-200769999999748904885
Q gi|254780791|r 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG-GSIEDL-WHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 182 QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGG-GS~eDL-~~FN~e~laraI~~~~iPVis 245 (529)
.| .....|++..+.. ++|+||+++-| |.+..+ +.=+.+.|++ .|+.||+.
T Consensus 92 ~G-~~~~~i~~~a~~~----------~~dlIv~g~~~~~~~~~~l~Gs~~~~ll~---~~~~pVlv 143 (147)
T d1tq8a_ 92 VG-APVDALVNLADEE----------KADLLVVGNVGLSTIAGRLLGSVPANVSR---RAKVDVLI 143 (147)
T ss_dssp CS-SHHHHHHHHHHHT----------TCSEEEEECCCCCSHHHHHTBBHHHHHHH---HTTCEEEE
T ss_pred EC-CHHHHHHHHHHCC----------CEEEEEECCCCCCCCCCCCCCCHHHHHHH---HCCCCEEE
T ss_conf 42-7699998764235----------13699855789986332502649999997---08998899
No 64
>d1jx6a_ c.93.1.1 (A:) Quorum-sensing signal (autoinducer-2) binding protein LuxP {Vibrio harveyi [TaxId: 669]}
Probab=54.66 E-value=5 Score=16.30 Aligned_cols=87 Identities=9% Similarity=0.134 Sum_probs=44.9
Q ss_pred CCCCEEEEEECCC--HHHHHHHHHHHHH---C--CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf 2652899984784--2589999998630---5--9758999721001111036799999999741003576777589995
Q gi|254780791|r 143 FIPKIIAVITSPT--GAVIRDILQRISC---R--FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILA 215 (529)
Q Consensus 143 ~~p~~i~vits~~--~a~~~D~~~~~~~---r--~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~ 215 (529)
.=|.+||||.+.. +.-+..+...+.. . +.+.+..+.+.-.++ ...-.+.|+.+-. .++|.||+.
T Consensus 38 ~k~~~I~vi~p~~~~~~f~~~~~~~~~~~~~~~g~~~~i~~~~~~s~~d--~~~q~~~i~~~i~-------~~vDgIIi~ 108 (338)
T d1jx6a_ 38 QRPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNAD--IKQQSLSLMEALK-------SKSDYLIFT 108 (338)
T ss_dssp SSCEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTTCC--HHHHHHHHHHHHH-------TTCSEEEEC
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC--HHHHHHHHHHHHH-------CCCCEEEEE
T ss_conf 8986899998999877899999999999999759957999986489889--9999999999996-------499989993
Q ss_pred CCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 168884442200769999999748904885
Q gi|254780791|r 216 RGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 216 RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
-...+ ..+.+.+......+||+.
T Consensus 109 ~~~~~-------~~~~i~~~~~~~~ipvv~ 131 (338)
T d1jx6a_ 109 LDTTR-------HRKFVEHVLDSTNTKLIL 131 (338)
T ss_dssp CSSST-------THHHHHHHHHHCSCEEEE
T ss_pred CCCCC-------CHHHHHHHHHHCCCEEEE
T ss_conf 68643-------269999999828982999
No 65
>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=54.43 E-value=5.1 Score=16.28 Aligned_cols=120 Identities=15% Similarity=0.180 Sum_probs=56.3
Q ss_pred CEEEEEECCCHHHH--HHHHH---------------HHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 28999847842589--99999---------------8630597-589997210011110367999999997410035767
Q gi|254780791|r 146 KIIAVITSPTGAVI--RDILQ---------------RISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCP 207 (529)
Q Consensus 146 ~~i~vits~~~a~~--~D~~~---------------~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~ 207 (529)
+||||||...|.+. .|-+. .|+.-.| +...--|.-+.|...++...++|+.+....
T Consensus 4 ~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d~------ 77 (163)
T d2csua3 4 NKVAIMTNAGGPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQDP------ 77 (163)
T ss_dssp SEEEEEESCHHHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHST------
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC------
T ss_conf 75999977868999999999985995689999999999976887346787412568899899999999997598------
Q ss_pred CCCEEEEECCCCCHHHHH-HCCHHHHHHHHHH--CCCEEEE-EECCCCCCHHHHHHHCCC---CCCCHHHH
Q ss_conf 775899951688844422-0076999999974--8904885-205777525898864123---77721456
Q gi|254780791|r 208 RPDIIILARGGGSIEDLW-HFNDEMIVRAIAN--SSIPIIS-AIGHETDWTLADYAADLR---APTPTGAA 271 (529)
Q Consensus 208 ~~D~iii~RGGGS~eDL~-~FN~e~laraI~~--~~iPVis-gIGHE~D~Tl~D~VAD~R---a~TPTaAA 271 (529)
.+|.|+++=...+..+.. .-.-+.++++... .+.||+. -+|............+.. ++||-.|+
T Consensus 78 ~vd~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kpv~~~~~~~~~~~~~~~~l~~~Gip~f~~pe~a~ 148 (163)
T d2csua3 78 NVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVSEKAKELLEKNGIPTYERPEDVA 148 (163)
T ss_dssp TCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTTTHHHHHHHHTTTCCEESSHHHHH
T ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 76879886125776655589999999999998369972799989998769999999988998679999999
No 66
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and second domains {Escherichia coli [TaxId: 562]}
Probab=54.25 E-value=5.1 Score=16.25 Aligned_cols=95 Identities=22% Similarity=0.371 Sum_probs=52.8
Q ss_pred EEEEEECCCHH--HHHHHH----------------HHHH--HCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 89998478425--899999----------------9863--059758999721001111036799999999741003576
Q gi|254780791|r 147 IIAVITSPTGA--VIRDIL----------------QRIS--CRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTC 206 (529)
Q Consensus 147 ~i~vits~~~a--~~~D~~----------------~~~~--~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~ 206 (529)
+|||++.-+|- +++..+ ..+. +-.|+++++.+++|=|.. +..++.++|.+.
T Consensus 8 kiGirp~~Dgr~~~~re~le~~t~~~ak~~a~~l~~~l~~~~g~~ve~V~~d~~i~~~~---eA~~~aekf~~~------ 78 (355)
T d1fuia2 8 KIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMA---EAAACEEKFSSQ------ 78 (355)
T ss_dssp EEEEEEBCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHCBCTTSCBCCEEECSSCBCSHH---HHHHHHHHHHTT------
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHH---HHHHHHHHHHHC------
T ss_conf 06778533565044320389999999999999999874126899769994675168869---999999998665------
Q ss_pred CCCCEEEEECC---CCCH---------HHHHHCCHH---------HHHHHHHHCCCEEEEEECCCC
Q ss_conf 77758999516---8884---------442200769---------999999748904885205777
Q gi|254780791|r 207 PRPDIIILARG---GGSI---------EDLWHFNDE---------MIVRAIANSSIPIISAIGHET 251 (529)
Q Consensus 207 ~~~D~iii~RG---GGS~---------eDL~~FN~e---------~laraI~~~~iPVisgIGHE~ 251 (529)
.+|++|++=+ -||. -=+|.||+. .++.+.....||-.+--||++
T Consensus 79 -~vd~~i~v~p~w~~~~~~~~~~~~~p~~vw~fn~~erpG~vgl~a~~aa~~q~Gip~~~iyg~~v 143 (355)
T d1fuia2 79 -NVGLTITVTPCWCYGSETIDMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDV 143 (355)
T ss_dssp -TEEEEEEEESSCCCHHHHSCCCSSSCEEEEECBCSSSBHHHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred -CCCEEEEEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCC
T ss_conf -98779998255466155453147998668826899998689999999999865987347607766
No 67
>d1byka_ c.93.1.1 (A:) Trehalose repressor, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=53.84 E-value=5.2 Score=16.20 Aligned_cols=191 Identities=15% Similarity=0.184 Sum_probs=74.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCCCCEEEE-EEECCCCEEEEEEECCCC-CCCCCCCCCCCE
Q ss_conf 88898622999999999997400-171899999705435688862799-987489479999973521-058668145988
Q gi|254780791|r 9 SLDHPEYSVSELSYHLKHIVESN-LSHVCVRGEISGYRGIHSSGHAYF-SLKDNHSRIDAIIWKGTL-NKIEFLPEEGIE 85 (529)
Q Consensus 9 ~~~~~~~svs~l~~~i~~~l~~~-~~~~~v~gEis~~~~~~~sGH~Yf-~lkd~~a~i~~~~~~~~~-~~~~~~~~~G~~ 85 (529)
++++| ...++...|...++.. |.- +... |+.. +..=--++ .|. ...++++++-... .........+..
T Consensus 11 ~~~~~--~~~~~~~~i~~~~~~~Gy~~--~~~~-s~~d--~~~~~~~i~~l~--~~~vdgiIi~~~~~~~~~~~~~~~~p 81 (255)
T d1byka_ 11 RLDSL--SENLAVQTMLPAFYEQGYDP--IMME-SQFS--PQLVAEHLGVLK--RRNIDGVVLFGFTGITEEMLAHWQSS 81 (255)
T ss_dssp CTTCH--HHHHHHHHHHHHHHHHTCEE--EEEE-CTTC--HHHHHHHHHHHH--TTTCCEEEEECCTTCCTTTSGGGSSS
T ss_pred CCCCH--HHHHHHHHHHHHHHHCCCEE--EEEE-CCCC--HHHHHHHHHHHH--HCCCCCEEECCCCCHHHHHHHHCCCC
T ss_conf 98898--99999999999999859999--9994-8999--899999999998--32655201002442399999976999
Q ss_pred EEEEEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCH--HH----H
Q ss_conf 99999966752884379999971016800799999999997654012261001631026528999847842--58----9
Q gi|254780791|r 86 FLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTG--AV----I 159 (529)
Q Consensus 86 v~~~g~~~~y~~~g~~ql~v~~i~~~g~G~l~~~~e~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits~~~--a~----~ 159 (529)
+++.+.- .+. |-.+ .++....| +.+-+.|.+.|. ++|++|+.+.. .. +
T Consensus 82 ~v~i~~~---~~~--~~~v--~~D~~~~g------~~~~~~L~~~g~-------------~~i~~i~~~~~~~~~~~~r~ 135 (255)
T d1byka_ 82 LVLLARD---AKG--FASV--CYDDEGAI------KILMQRLYDQGH-------------RNISYLGVPHSDVTTGKRRH 135 (255)
T ss_dssp EEEESSC---CSS--CEEE--EECHHHHH------HHHHHHHHHTTC-------------CCEEEECCCTTSTTTTHHHH
T ss_pred EEEECCC---CCC--CCEE--EECCHHHH------HHHHHHHHHHCC-------------CCCCCCCCCCCCCCHHHHHH
T ss_conf 9981667---899--9889--96747999------999999998512-------------54323577744550777776
Q ss_pred HHHHHHHHHCCCEE-EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 99999863059758-99972100111103679999999974100357677758999516888444220076999999974
Q gi|254780791|r 160 RDILQRISCRFPLR-VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 (529)
Q Consensus 160 ~D~~~~~~~r~p~~-~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~ 238 (529)
+-|.+.+++. +++ ...++ |.. ..+ +.+.+..+-. +++|+|+.. -|-+++ .+.+++.+
T Consensus 136 ~g~~~~~~~~-~i~~~~~~~----~~~-~~~---~~~~~~~~l~----~~~~aii~~------~d~~A~---g~~~~l~~ 193 (255)
T d1byka_ 136 EAYLAFCKAH-KLHPVAALP----GLA-MKQ---GYENVAKVIT----PETTALLCA------TDTLAL---GASKYLQE 193 (255)
T ss_dssp HHHHHHHHHT-TCCCEEECC----CSC-HHH---HHHHSGGGCC----TTCCEEEES------SHHHHH---HHHHHHHH
T ss_pred HHHHHHHHHC-CCCCCCCCC----CCC-HHH---HHHHHHHHHC----CCCCEEECC------CHHHHH---HHHHHHHH
T ss_conf 6799999973-998620137----787-788---8899999707----765443034------436575---69999998
Q ss_pred CC--CEEEEEECCCCCCHHHHHH
Q ss_conf 89--0488520577752589886
Q gi|254780791|r 239 SS--IPIISAIGHETDWTLADYA 259 (529)
Q Consensus 239 ~~--iPVisgIGHE~D~Tl~D~V 259 (529)
.. .|.|.|+| |.-++++.
T Consensus 194 ~g~~d~~ii~~d---~~~~~~~~ 213 (255)
T d1byka_ 194 QRIDTLQLASVG---NTPLMKFL 213 (255)
T ss_dssp TTCCSCEEEEEC---CCHHHHHH
T ss_pred HCCCCCCEEEEC---CHHHHHHC
T ss_conf 486644413448---74899834
No 68
>d1zl0a1 c.8.10.1 (A:170-307) LD-carboxypeptidase A, C-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=53.55 E-value=5.2 Score=16.17 Aligned_cols=66 Identities=15% Similarity=0.048 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHH-HHHHHCCCEEEEE--ECCCCCCH
Q ss_conf 036799999999741003576777589995168884442200769999-9997489048852--05777525
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV-RAIANSSIPIISA--IGHETDWT 254 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~la-raI~~~~iPVisg--IGHE~D~T 254 (529)
.+..|-+.+..+... ...+.+-.||++|=...-.+=+.+.-+.+. +.+...++||+++ +||..+..
T Consensus 53 ~~~~idR~L~~L~~~---G~~~~v~giv~G~f~~~~~~~~~~~~~~vl~~~~~~~~~Pv~~~~~~GH~~p~~ 121 (138)
T d1zl0a1 53 PYYRLERSLWQLLES---IDARQLGAICLGSFTDCPRKEVAHSLERIFGEYAAAIEVPLYHHLPSGHGAQNR 121 (138)
T ss_dssp CHHHHHHHHHHHHHH---TTGGGCSEEEEEEEETCCCTTCSSCHHHHHHHHHHHTTCCEEECCSCSSSSCCC
T ss_pred CCHHHHHHHHHHHHC---CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCE
T ss_conf 721899999999863---976346789970157788875046599999999976598299899988999846
No 69
>d1f0xa2 d.145.1.1 (A:9-273) D-lactate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=52.91 E-value=5.3 Score=16.09 Aligned_cols=15 Identities=27% Similarity=0.062 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHCCC
Q ss_conf 999999765401226
Q gi|254780791|r 120 LEKRKKKLLEEGLFS 134 (529)
Q Consensus 120 ~e~lk~~L~~eGlfd 134 (529)
+.++-+.|...|+|-
T Consensus 116 ~~~L~~~l~~~g~~~ 130 (265)
T d1f0xa2 116 LYSLEKALKPLGREP 130 (265)
T ss_dssp HHHHHHHHGGGTEEC
T ss_pred HHHHHHHHHHCCCCC
T ss_conf 899999888669933
No 70
>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.85 E-value=2.1 Score=19.76 Aligned_cols=63 Identities=13% Similarity=0.105 Sum_probs=33.0
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
Q ss_conf 2899984784258999999863059758999721001111036799999999741003576777589995168
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGG 218 (529)
.-+||+|.|......+.+...+....+.++.+.....-+....++++.++.. ++|++|++-=|
T Consensus 25 ~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~~~~~~~~~~~~~~~~~l~~~----------~~Dliv~~~~~ 87 (203)
T d2bw0a2 25 EVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSRWRAKGQALPDVVAKYQAL----------GAELNVLPFCS 87 (203)
T ss_dssp EEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSCCEETTEECHHHHHHHHTT----------CCSEEEESSCS
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHH----------CCCCEEEEECC
T ss_conf 6899982898676777234447761986211321111121569999999971----------99836985110
No 71
>d1al3a_ c.94.1.1 (A:) Cofactor-binding fragment of LysR-type protein CysB {Klebsiella aerogenes [TaxId: 28451]}
Probab=52.37 E-value=5.1 Score=16.28 Aligned_cols=91 Identities=16% Similarity=0.256 Sum_probs=51.5
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
Q ss_conf 28999847842589999998630597-58999721001111036799999999741003576777589995168884442
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL 224 (529)
-+||...+.....+-+++....++|| +++.++ . +...++.+++.. ..+|+.|...+....++|
T Consensus 8 LrIg~~~~~~~~~LP~~l~~f~~~~P~v~v~l~----~--~~~~~l~~~l~~----------g~~D~ai~~~~~~~~~~l 71 (237)
T d1al3a_ 8 LYVATTHTQARYALPGVIKGFIERYPRVSLHMH----Q--GSPTQIAEAVSK----------GNADFAIATEALHLYDDL 71 (237)
T ss_dssp EEEEECHHHHHHTSHHHHHHHHHHCTEEEEEEE----E--CCHHHHHHHHHT----------TCCSEEEESSCCCTTSCE
T ss_pred EEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEE----E--CCHHHHHHHHHC----------CCCCEEEEEECCCCCCCC
T ss_conf 999967889999999999999998889189999----8--987999999743----------377689996033333333
Q ss_pred HHCCHHHHHHHHHHCCCEEEEEECC----CCCCHHHHHH
Q ss_conf 2007699999997489048852057----7752589886
Q gi|254780791|r 225 WHFNDEMIVRAIANSSIPIISAIGH----ETDWTLADYA 259 (529)
Q Consensus 225 ~~FN~e~laraI~~~~iPVisgIGH----E~D~Tl~D~V 259 (529)
.+. .++..++-++.+-+| ....++.|+.
T Consensus 72 ~~~-------~l~~~~~~~v~~~~h~la~~~~~~~~dL~ 103 (237)
T d1al3a_ 72 VML-------PCYHWNRSIVVTPEHPLATKGSVSIEELA 103 (237)
T ss_dssp EEE-------EEEEECEEEEECTTSTTTTTSCCCHHHHH
T ss_pred CCC-------CCCCCEEEEEEECCCCCCCCCCCCCHHHC
T ss_conf 345-------55432389999557311002343210211
No 72
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]}
Probab=52.30 E-value=5.4 Score=16.01 Aligned_cols=57 Identities=26% Similarity=0.363 Sum_probs=41.1
Q ss_pred HHHHHCCCCCCCCCCEEEEE--------CCCCCHHHHHHCCHHHH----------HHHHHHCCCEEEEEECC-CCC
Q ss_conf 99741003576777589995--------16888444220076999----------99997489048852057-775
Q gi|254780791|r 196 QLNTLKEGRTCPRPDIIILA--------RGGGSIEDLWHFNDEMI----------VRAIANSSIPIISAIGH-ETD 252 (529)
Q Consensus 196 ~~~~~~~~~~~~~~D~iii~--------RGGGS~eDL~~FN~e~l----------araI~~~~iPVisgIGH-E~D 252 (529)
+|-..........||++||+ -||...+||-.-|-+.| +..|-.+-+|||.+|-| .+|
T Consensus 306 KF~dIkcr~~gl~P~~~VlVaTvRALK~HGG~~~~~l~~eNl~Al~~G~~NL~rHIeNi~~fGlpvVVAIN~F~tD 381 (549)
T d1eg7a_ 306 KFYDVKCRYAGFKPDATVIVATVRALKMHGGVPKSDLATENLEALREGFANLEKHIENIGKFGVPAVVAINAFPTD 381 (549)
T ss_dssp HHHHTHHHHHTCCCCEEEEEECHHHHHHTTTCCGGGTTSCCHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCTTC
T ss_pred HHHCCCCCCCCCCCCEEEEEEEHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 4400423457999753899953134554579994881732599999887779999875222289749985257753
No 73
>d1xrsb1 c.23.6.1 (B:102-261) D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=52.16 E-value=5.4 Score=16.00 Aligned_cols=86 Identities=9% Similarity=0.155 Sum_probs=44.6
Q ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC-CCCHHHHHHCCHHHHHHHHHH----CCCEEEEE
Q ss_conf 5899972100111103679999999974100357677758999516-888444220076999999974----89048852
Q gi|254780791|r 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG-GGSIEDLWHFNDEMIVRAIAN----SSIPIISA 246 (529)
Q Consensus 172 ~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RG-GGS~eDL~~FN~e~laraI~~----~~iPVisg 246 (529)
++|+-..+-| .+++++++...- ++|+|.+.== +.+...+-. =..+++.+-+ ..+|||.|
T Consensus 57 ~eVi~LG~~v----p~e~~v~~a~e~----------~~d~VglS~l~t~~~~h~~~--~~~~i~~l~~~g~~d~v~vivG 120 (160)
T d1xrsb1 57 IDAYNLGSQV----ANEDFIKKAVEL----------EADVLLVSQTVTQKNVHIQN--MTHLIELLEAEGLRDRFVLLCG 120 (160)
T ss_dssp EEEEECCSSB----CHHHHHHHHHHT----------TCSEEEEECCCCTTSHHHHH--HHHHHHHHHHTTCGGGSEEEEE
T ss_pred EEEEECCCCC----CHHHHHHHHHHC----------CCCEEEEEECCCCCCHHHHH--HHHHHHHHHHCCCCCCEEEEEC
T ss_conf 4999678889----999999999863----------99999985043444026777--8889999997399875599980
Q ss_pred ECCCCCCHHHHHH-HCCCCCCCHHHHHHH
Q ss_conf 0577752589886-412377721456763
Q gi|254780791|r 247 IGHETDWTLADYA-ADLRAPTPTGAAEMA 274 (529)
Q Consensus 247 IGHE~D~Tl~D~V-AD~Ra~TPTaAAEla 274 (529)
|--.|..+++.+ ||.=++.=|.|.+.+
T Consensus 121 -G~~~~~~~a~~~GaD~~f~~g~~a~~~a 148 (160)
T d1xrsb1 121 -GPRINNEIAKELGYDAGFGPGRFADDVA 148 (160)
T ss_dssp -CTTCCHHHHHTTTCSEEECTTCCHHHHH
T ss_pred -CCCCCHHHHHHCCCCEECCCCCCHHHHH
T ss_conf -8979999999869988838998899999
No 74
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=51.74 E-value=4.4 Score=16.85 Aligned_cols=72 Identities=19% Similarity=0.211 Sum_probs=38.0
Q ss_pred EEEEEECCCHHHHHHHHHHHHH-CC-CEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
Q ss_conf 8999847842589999998630-59-758999721001111036799999999741003576777589995168884442
Q gi|254780791|r 147 IIAVITSPTGAVIRDILQRISC-RF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 (529)
Q Consensus 147 ~i~vits~~~a~~~D~~~~~~~-r~-p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL 224 (529)
+||||. -.|+ +.+..+.+++ .+ ++++..... +.+ + .++|.|||- ||||..+-
T Consensus 4 kIGvl~-l~G~-~~~~~~al~~lg~~~~~v~~~~~-------~~~-------l---------~~~D~lIlP-Ggg~~~~~ 57 (218)
T d2abwa1 4 TIGVLS-LQGD-FEPHINHFIKLQIPSLNIIQVRN-------VHD-------L---------GLCDGLVIP-GGESTTVR 57 (218)
T ss_dssp EEEEEC-TTSC-CHHHHHHHHTTCCTTEEEEEECS-------HHH-------H---------HTCSEEEEC-CSCHHHHH
T ss_pred EEEEEE-CCCC-HHHHHHHHHHCCCCCEEEEEECC-------HHH-------H---------HHCCEEEEC-CCCCCHHH
T ss_conf 899996-7886-99999999984899618999499-------999-------8---------408889976-88863799
Q ss_pred HHCC------HHHHHHHHHHCCCEEE
Q ss_conf 2007------6999999974890488
Q gi|254780791|r 225 WHFN------DEMIVRAIANSSIPII 244 (529)
Q Consensus 225 ~~FN------~e~laraI~~~~iPVi 244 (529)
+... .+.+.+.+.....||+
T Consensus 58 ~~~~~~~~~~~~~i~~~~~~~gkPil 83 (218)
T d2abwa1 58 RCCAYENDTLYNALVHFIHVLKKPIW 83 (218)
T ss_dssp HHTTHHHHHHHHHHHHHHHTSCCCEE
T ss_pred HHHHHHHCCCHHHHHHHHHHCCCEEE
T ss_conf 99887745666789999987398599
No 75
>d1wota_ d.218.1.5 (A:) Unnamed putative nucleotidyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=50.87 E-value=2.3 Score=19.31 Aligned_cols=54 Identities=17% Similarity=0.263 Sum_probs=38.7
Q ss_pred HHHHHHHHHHCCCE-EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHH
Q ss_conf 99999986305975-8999721001111036799999999741003576777589995168884442200769
Q gi|254780791|r 159 IRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 (529)
Q Consensus 159 ~~D~~~~~~~r~p~-~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e 230 (529)
..+.+..+..+|++ .+++|.+.+-|+..+.| .+|+.|....+-|..+++.+-++
T Consensus 12 ~~~~i~~i~~k~~v~~v~lFGS~arg~~~~~S------------------DIDi~V~~~~~~~~~~~~~l~~~ 66 (98)
T d1wota_ 12 RREAVLSLCARHGAVRVRVFGSVARGEAREDS------------------DLDLLVAFEEGRTLLDHARLKLA 66 (98)
T ss_dssp HHHHHHHHHHHHTCSSCEECSHHHHTCCCTTC------------------CCEEEECCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC------------------CCEEEEEECCCCCHHHHHHHHHH
T ss_conf 99999999998298589998886179889999------------------94389975899799999999999
No 76
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=49.71 E-value=5.9 Score=15.70 Aligned_cols=71 Identities=21% Similarity=0.277 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC-CCCCHHHHH-HCCHHHHHHH
Q ss_conf 89999998630597589997210011110367999999997410035767775899951-688844422-0076999999
Q gi|254780791|r 158 VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILAR-GGGSIEDLW-HFNDEMIVRA 235 (529)
Q Consensus 158 ~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~R-GGGS~eDL~-~FN~e~lara 235 (529)
.+.++...+... ++++.. ....| .....|++..+.. ++|+||+++ |-|.+..+| .=..+.|
T Consensus 82 ~l~~~~~~~~~~-gv~~~~--~~~~G-~~~~~I~~~a~~~----------~~dliV~G~~~~~~~~~~~~GS~a~~v--- 144 (160)
T d1mjha_ 82 KMENIKKELEDV-GFKVKD--IIVVG-IPHEEIVKIAEDE----------GVDIIIMGSHGKTNLKEILLGSVTENV--- 144 (160)
T ss_dssp HHHHHHHHHHHT-TCEEEE--EEEEE-CHHHHHHHHHHHT----------TCSEEEEESCCSSCCTTCSSCHHHHHH---
T ss_pred HHHHHHHHHHHC-CCEEEE--EEEEC-CHHHHHHHHHHCC----------CCCEEEECCCCCCCCCCCCCCCHHHHH---
T ss_conf 999999998765-976999--99945-5898776652024----------221477616899864214107099999---
Q ss_pred HHHCCCEEEE
Q ss_conf 9748904885
Q gi|254780791|r 236 IANSSIPIIS 245 (529)
Q Consensus 236 I~~~~iPVis 245 (529)
+-.|+.||+.
T Consensus 145 l~~s~~pVlv 154 (160)
T d1mjha_ 145 IKKSNKPVLV 154 (160)
T ss_dssp HHHCCSCEEE
T ss_pred HHCCCCCEEE
T ss_conf 9629998999
No 77
>d3bida1 d.348.1.1 (A:1-56) Uncharacterized protein NMB1088 {Neisseria meningitidis [TaxId: 487]}
Probab=49.59 E-value=5.9 Score=15.69 Aligned_cols=18 Identities=28% Similarity=0.338 Sum_probs=14.9
Q ss_pred CCCEEEEEEECCCCEEEE
Q ss_conf 886279998748947999
Q gi|254780791|r 49 SSGHAYFSLKDNHSRIDA 66 (529)
Q Consensus 49 ~sGH~Yf~lkd~~a~i~~ 66 (529)
+.|+|||.||+.+.++=+
T Consensus 9 ~~g~~rfrLka~Ng~vIa 26 (56)
T d3bida1 9 AKGEYRWRLKAANHEIIA 26 (56)
T ss_dssp TTSCEEEEEECTTSCEEE
T ss_pred CCCCEEEEEEECCCCEEE
T ss_conf 899899999948999998
No 78
>d2k8ea2 d.348.1.1 (A:75-126) Uncharacterized protein YegP {Escherichia coli [TaxId: 562]}
Probab=49.21 E-value=6 Score=15.64 Aligned_cols=19 Identities=37% Similarity=0.557 Sum_probs=15.4
Q ss_pred CCCEEEEEEECCCCEEEEE
Q ss_conf 8862799987489479999
Q gi|254780791|r 49 SSGHAYFSLKDNHSRIDAI 67 (529)
Q Consensus 49 ~sGH~Yf~lkd~~a~i~~~ 67 (529)
++|.|||.||..+.+|=|.
T Consensus 4 ~~g~~~f~LkA~NgqvI~~ 22 (52)
T d2k8ea2 4 SNGKFYFNLKAANHQIIGS 22 (52)
T ss_dssp TTTEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEECCCCCEEEE
T ss_conf 6896889998489988876
No 79
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=49.07 E-value=6 Score=15.63 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=52.8
Q ss_pred CCCEEEEEEC-CCHHHHHHHHHHH----HHCCC-EEEEEE----------------ECC-----CCCCC-----------
Q ss_conf 6528999847-8425899999986----30597-589997----------------210-----01111-----------
Q gi|254780791|r 144 IPKIIAVITS-PTGAVIRDILQRI----SCRFP-LRVIIF----------------PVK-----VQGDE----------- 185 (529)
Q Consensus 144 ~p~~i~vits-~~~a~~~D~~~~~----~~r~p-~~~~~~----------------p~~-----vQG~~----------- 185 (529)
-|.||||+|| -.+.|++.+++-+ ....+ .+++-| +.. -||-.
T Consensus 68 ~~~rIgIl~sGG~aPG~N~vI~gvv~~~~~~~~~~~v~G~~~G~~GL~~~~~~~L~~~~v~~~~~~GG~~l~~s~r~~~~ 147 (550)
T d2f48a1 68 KALNIGIILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIE 147 (550)
T ss_dssp SCCEEEEEEBSSCCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHHHTTCCSSTTTCCBCCCCC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEEECCHHHHHHHHHCCCCEECCCCCCCCC
T ss_conf 98779998967872889999999999999858998999988503886489879899999834872799072179999976
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 036799999999741003576777589995168884442200769999999748904885
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
..+.+-.+++.+...+ .|.+|++=|.||.....-+.++--. ..++||||.
T Consensus 148 ~~e~~~~i~~~l~~~~-------Id~LviIGGd~S~~~a~~Lae~~~~---~~~~i~vig 197 (550)
T d2f48a1 148 TEEHYNKALFVAKENN-------LNAIIIIGGDDSNTNAAILAEYFKK---NGENIQVIG 197 (550)
T ss_dssp SHHHHHHHHHHHHHTT-------CSEEEEEESHHHHHHHHHHHHHHHH---TTCCCEEEE
T ss_pred CHHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHHHHHHHHH---HCCCCCEEE
T ss_conf 7788899999998648-------8879998983799999999999997---189962897
No 80
>d2k7ia1 d.348.1.1 (A:1-62) Uncharacterized protein Atu0232 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=48.33 E-value=3.2 Score=18.04 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=14.5
Q ss_pred CCCEEEEEEECCCCEEEE
Q ss_conf 886279998748947999
Q gi|254780791|r 49 SSGHAYFSLKDNHSRIDA 66 (529)
Q Consensus 49 ~sGH~Yf~lkd~~a~i~~ 66 (529)
+.|+|||.||+.+.++=+
T Consensus 10 ~~g~~rfrL~a~Ng~iIa 27 (62)
T d2k7ia1 10 KAGEYRFRFKASNGETMF 27 (62)
T ss_dssp TTSCEEEEECCTTSCCCE
T ss_pred CCCCEEEEEEECCCCEEE
T ss_conf 999899999908999998
No 81
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=47.95 E-value=6.2 Score=15.49 Aligned_cols=37 Identities=14% Similarity=0.292 Sum_probs=21.5
Q ss_pred CCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHH
Q ss_conf 75899951688844422007699999997489048852057775258
Q gi|254780791|r 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255 (529)
Q Consensus 209 ~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl 255 (529)
.|.++++=|-||.... ..+++..+|| .||-.-+|-=|
T Consensus 94 I~~li~iGG~~s~~~a---------~~L~~~~~~v-vgIPkTIDNDl 130 (319)
T d4pfka_ 94 IQGLVVIGGDGSYQGA---------KKLTEHGFPC-VGVPGTIDNDI 130 (319)
T ss_dssp CCEEEEEECHHHHHHH---------HHHHHTTCCE-EEEEBCSSCCC
T ss_pred CCEEEEECCCHHHHHH---------HHHHHCCCCE-EEEEEECCCCC
T ss_conf 6638995383689999---------9987336755-52210216886
No 82
>d1u9ca_ c.23.16.2 (A:) GK2698 ortholog {Bacillus stearothermophilus [TaxId: 1422]}
Probab=47.94 E-value=6.2 Score=15.49 Aligned_cols=43 Identities=28% Similarity=0.429 Sum_probs=31.1
Q ss_pred CCCCEEEEECCCCCHHHHHHCCH--HHHHHHHHHCCCEEEEEECCCC
Q ss_conf 77758999516888444220076--9999999748904885205777
Q gi|254780791|r 207 PRPDIIILARGGGSIEDLWHFND--EMIVRAIANSSIPIISAIGHET 251 (529)
Q Consensus 207 ~~~D~iii~RGGGS~eDL~~FN~--e~laraI~~~~iPVisgIGHE~ 251 (529)
..||+|+|.=|-|...||+. |+ -.+++..++..- +|.||.|-.
T Consensus 85 ~dYd~v~iPGG~g~~~~l~~-~~~l~~li~~~~~~~k-~iaAIChgp 129 (221)
T d1u9ca_ 85 HGFDAIFLPGGHGTMFDFPD-NETLQYVLQQFAEDGR-IIAAVCHGP 129 (221)
T ss_dssp SSCSEEEECCCTTHHHHSTT-CHHHHHHHHHHHHTTC-EEEEETTGG
T ss_pred HHCCEEEECCCCCHHHCCHH-HHHHHHHHHHHHHCCC-CCEEECCCC
T ss_conf 67888992798726652402-6899999999875358-212410263
No 83
>d2d00a1 c.149.1.1 (A:6-109) V-type ATP synthase subunit F, AtpF {Thermus thermophilus [TaxId: 274]}
Probab=47.71 E-value=6.2 Score=15.46 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=43.0
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEE--------CCCCCCHHH
Q ss_conf 103679999999974100357677758999516888444220076999999974890488520--------577752589
Q gi|254780791|r 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI--------GHETDWTLA 256 (529)
Q Consensus 185 ~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgI--------GHE~D~Tl~ 256 (529)
.-+.++.++|+.+-... .+-+|+| .|+++.--.+.+-+..-++.+|+|..| |.+-+..|-
T Consensus 24 ~~~ee~~~~l~~l~~~~------d~gII~I------te~~~~~i~~~i~~~~~~~~~P~Il~IP~~~g~~~~~~~~~~ir 91 (104)
T d2d00a1 24 SSAEEAQSLLETLVERG------GYALVAV------DEALLPDPERAVERLMRGRDLPVLLPIAGLKEAFQGHDVEGYMR 91 (104)
T ss_dssp SSHHHHHHHHHHHHHHC------CCSEEEE------ETTTCSCHHHHHHHHTTCCCCCEEEEESCGGGGGSSSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCC------CEEEEEE------CHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99899999999997479------9589998------38998765999999983699888999589988887604778999
Q ss_pred HHH
Q ss_conf 886
Q gi|254780791|r 257 DYA 259 (529)
Q Consensus 257 D~V 259 (529)
++|
T Consensus 92 ~~v 94 (104)
T d2d00a1 92 ELV 94 (104)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
No 84
>d2c4va1 c.23.13.1 (A:1-158) Type II 3-dehydroquinate dehydratase {Helicobacter pylori [TaxId: 210]}
Probab=47.66 E-value=6.2 Score=15.46 Aligned_cols=70 Identities=20% Similarity=0.308 Sum_probs=50.2
Q ss_pred HHHHHHHHH---H-C-CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHH
Q ss_conf 999999863---0-5-9758999721001111036799999999741003576777589995168884442200769999
Q gi|254780791|r 159 IRDILQRIS---C-R-FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 (529)
Q Consensus 159 ~~D~~~~~~---~-r-~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~la 233 (529)
+.|+...++ + + +.+++..|-+=..| +|+..|..+.. +.+|.|||-=|| |..-...|-
T Consensus 27 L~~i~~~~~~~a~~~~l~v~l~~~QSN~Eg-----elId~I~~a~~-------~~~dgiIINPga------~ThtS~al~ 88 (158)
T d2c4va1 27 LDQIHEIMQTFVKQGNLDVELEFFQTNFEG-----EIIDKIQESVG-------SDYEGIIINPGA------FSHTSIAIA 88 (158)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEECSCHH-----HHHHHHHHTTS-------TTEEEEEEECGG------GGGTCHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEEHHHHHHHHHH-----HHHHHHHHHHC-------CCCCEEEECCHH------HEEEEEEHH
T ss_conf 999999999999970884102468776899-----99999999727-------895369964415------324110118
Q ss_pred HHHHHCCCEEEEE
Q ss_conf 9997489048852
Q gi|254780791|r 234 RAIANSSIPIISA 246 (529)
Q Consensus 234 raI~~~~iPVisg 246 (529)
.|+..+++|+|-=
T Consensus 89 DAl~~~~~P~iEV 101 (158)
T d2c4va1 89 DAIMLAGKPVIEV 101 (158)
T ss_dssp HHHHHSSSCEEEE
T ss_pred HHHHHCCCCEEEE
T ss_conf 7887539988999
No 85
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]}
Probab=47.46 E-value=6.3 Score=15.43 Aligned_cols=80 Identities=15% Similarity=0.251 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEECCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHH
Q ss_conf 8425899999986305975899972100-111103679999999974100357677758999516888444220076999
Q gi|254780791|r 154 PTGAVIRDILQRISCRFPLRVIIFPVKV-QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 (529)
Q Consensus 154 ~~~a~~~D~~~~~~~r~p~~~~~~p~~v-QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~l 232 (529)
++-.++-++.+.+.+..|+.+++|..+- -|..-..+.+..|... +-++-|-=.+|+..... .+
T Consensus 112 ~s~~~i~~~~~~v~~~~~~pi~iYn~P~~~~~~~~~~~~~~l~~~-----------p~v~giK~~~~~~~~~~-----~~ 175 (292)
T d1xkya1 112 PSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEI-----------ENIVAIKDAGGDVLTMT-----EI 175 (292)
T ss_dssp CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTS-----------TTEEEEEECSSCHHHHH-----HH
T ss_pred CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCC-----------CCEEEEECCCCCHHHHH-----EE
T ss_conf 899999999999843689868998478645775698997654038-----------99898722542012222-----01
Q ss_pred HHHHHHCCCEEEEEECCCCC
Q ss_conf 99997489048852057775
Q gi|254780791|r 233 VRAIANSSIPIISAIGHETD 252 (529)
Q Consensus 233 araI~~~~iPVisgIGHE~D 252 (529)
.........|++ |++..
T Consensus 176 -~~~~~~~~~v~~--G~~~~ 192 (292)
T d1xkya1 176 -IEKTADDFAVYS--GDDGL 192 (292)
T ss_dssp -HHHSCTTCEEEE--SSGGG
T ss_pred -EEECCCCCEEEE--CCCCC
T ss_conf -210478887997--97656
No 86
>d1ttza_ c.47.1.1 (A:) Hypothetical protein XCC2852 {Xanthomonas campestris [TaxId: 339]}
Probab=45.78 E-value=5 Score=16.35 Aligned_cols=31 Identities=16% Similarity=0.205 Sum_probs=22.8
Q ss_pred CCEEEEECCCCCHHHHHHCCHHHHHHHHHHCC
Q ss_conf 75899951688844422007699999997489
Q gi|254780791|r 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 (529)
Q Consensus 209 ~D~iii~RGGGS~eDL~~FN~e~laraI~~~~ 240 (529)
.+|=||..+|| .+..|+||.+.|.+.+...|
T Consensus 45 ~~IPVl~~~~~-~~l~w~fd~~~l~~~L~~~~ 75 (75)
T d1ttza_ 45 LRVPVLRDPMG-RELDWPFDAPRLRAWLDAAP 75 (75)
T ss_dssp TTCSEEECTTC-CEEESCCCHHHHHHHHHTCC
T ss_pred CEEEEEEECCE-EEECCCCCHHHHHHHHHCCC
T ss_conf 80139997991-39858659999999985499
No 87
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]}
Probab=45.36 E-value=6.7 Score=15.19 Aligned_cols=87 Identities=15% Similarity=0.267 Sum_probs=52.6
Q ss_pred HHHHHHHHH--HCCCEEEEEEEC----CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHH
Q ss_conf 999999863--059758999721----00111103679999999974100357677758999516888444220076999
Q gi|254780791|r 159 IRDILQRIS--CRFPLRVIIFPV----KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 (529)
Q Consensus 159 ~~D~~~~~~--~r~p~~~~~~p~----~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~l 232 (529)
++++-+... ++|.+.++++|. .+..+..+.-|..|.+.+..+. .|+|=+ -|+.|.++.
T Consensus 122 l~~~~~v~~e~~~~glP~v~e~~p~g~~~~~~~~~~~v~~aaria~ElG-------aDivK~---------~~p~~~~~~ 185 (251)
T d1ojxa_ 122 FEELARIKRDAVKFDLPLVVWSYPRGGKVVNETAPEIVAYAARIALELG-------ADAMKI---------KYTGDPKTF 185 (251)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHT-------CSEEEE---------CCCSSHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHC-------CCEEEE---------CCCCCHHHH
T ss_conf 9999999999998099189997505875456778899999999999868-------988983---------489857889
Q ss_pred HHHHH-HCCCEEEEEECC--CCCCHHHHHHHC
Q ss_conf 99997-489048852057--775258988641
Q gi|254780791|r 233 VRAIA-NSSIPIISAIGH--ETDWTLADYAAD 261 (529)
Q Consensus 233 araI~-~~~iPVisgIGH--E~D~Tl~D~VAD 261 (529)
.+.+. .|++||+-.-|= .++..+.++|-+
T Consensus 186 ~~~v~~a~~~pv~~~gG~~~~~~~~~l~~~~~ 217 (251)
T d1ojxa_ 186 SWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEG 217 (251)
T ss_dssp HHHHHHTTTSCEEEECCSCCSSHHHHHHHHHH
T ss_pred HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHH
T ss_conf 99987137876578679988899999999999
No 88
>d1wjja_ b.40.4.3 (A:) Hypothetical protein At4g28440 (F20O9.120) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=44.88 E-value=6.8 Score=15.13 Aligned_cols=79 Identities=9% Similarity=0.103 Sum_probs=50.8
Q ss_pred HHCCCCEEEEEEECCCCC---------------CCC-CCEE-EEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE-E
Q ss_conf 400171899999705435---------------688-8627-999874894799999735210586681459889999-9
Q gi|254780791|r 29 ESNLSHVCVRGEISGYRG---------------IHS-SGHA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI-G 90 (529)
Q Consensus 29 ~~~~~~~~v~gEis~~~~---------------~~~-sGH~-Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~-g 90 (529)
.....+|-|.+.|-+... .+. .+.+ .+.+-|+.+.|+..+|...... ++.|+-|.+. |
T Consensus 23 ~pg~~~vnl~vkVl~~~~~~~~~r~~~~~~~~~~~g~~~~v~~~~v~DeTG~i~~tlW~~~~~~----l~~Gd~v~i~na 98 (145)
T d1wjja_ 23 KPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDETGCILFTARNDQVDL----MKPGATVILRNS 98 (145)
T ss_dssp CTTCCCEEEEEEEEEEEECCSSSSCCSCSSCCSSCCCCCCCEEEEEECSSCEEEEEECTTHHHH----TCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCC----CCCCCEEEEEEE
T ss_conf 9999991699999881031553146664200102588757999898746876999997154012----675788999528
Q ss_pred EEEEECCCCEEEEEEEE---EEECCC
Q ss_conf 96675288437999997---101680
Q gi|254780791|r 91 KITTFPGSSKYQIIIES---LIPSGS 113 (529)
Q Consensus 91 ~~~~y~~~g~~ql~v~~---i~~~g~ 113 (529)
++..| +|.++|.+.. |++...
T Consensus 99 ~v~~~--~G~~~L~vg~~g~I~~~~e 122 (145)
T d1wjja_ 99 RIDMF--KGTMRLGVDKWGRIEATGA 122 (145)
T ss_dssp EEEEE--TTEEEEEECTTCCBCCCSC
T ss_pred EEEEE--CCEEEEEECCCEEEEECCC
T ss_conf 99888--9989999899778999788
No 89
>d2k49a1 d.348.1.1 (A:59-110) Uncharacterized protein SO3888 {Shewanella oneidensis [TaxId: 70863]}
Probab=44.48 E-value=6.5 Score=15.32 Aligned_cols=18 Identities=28% Similarity=0.510 Sum_probs=14.1
Q ss_pred CCCEEEEEEECCCCEEEE
Q ss_conf 886279998748947999
Q gi|254780791|r 49 SSGHAYFSLKDNHSRIDA 66 (529)
Q Consensus 49 ~sGH~Yf~lkd~~a~i~~ 66 (529)
++|.+||.||-.+.++=+
T Consensus 4 k~gk~~F~LkA~NgevI~ 21 (52)
T d2k49a1 4 KNDKPYFNLKAANHQIIG 21 (52)
T ss_dssp TTTEEEEEEECTTCCEEE
T ss_pred CCCCEEEEEECCCCCEEE
T ss_conf 589578999848998887
No 90
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=44.39 E-value=6.9 Score=15.07 Aligned_cols=20 Identities=15% Similarity=0.185 Sum_probs=10.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8889862299999999999740
Q gi|254780791|r 9 SLDHPEYSVSELSYHLKHIVES 30 (529)
Q Consensus 9 ~~~~~~~svs~l~~~i~~~l~~ 30 (529)
+.+.|. .+++...+...+..
T Consensus 12 ~l~~~f--~~~~~~gi~~~~~~ 31 (275)
T d2nzug1 12 DISNIF--YAELARGIEDIATM 31 (275)
T ss_dssp CTTSHH--HHHHHHHHHHHHHH
T ss_pred CCCCHH--HHHHHHHHHHHHHH
T ss_conf 887989--99999999999998
No 91
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]}
Probab=43.23 E-value=7.1 Score=14.93 Aligned_cols=43 Identities=9% Similarity=0.162 Sum_probs=28.8
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 1111036799999999741003576777589995168884442200769999999748904885
Q gi|254780791|r 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 182 QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
.|+ ....|++..+. ..+|+||++.-|.|. +.|.|..+..|++-
T Consensus 94 ~G~-~~~~I~~~a~~----------~~~DLIV~Gs~g~~~----------l~r~l~g~~~~~li 136 (138)
T d1q77a_ 94 IGP-LSEEVKKFVEG----------KGYELVVWACYPSAY----------LCKVIDGLNLASLI 136 (138)
T ss_dssp CSC-HHHHHHHHHTT----------SCCSEEEECSCCGGG----------THHHHHHSSSEEEE
T ss_pred CCH-HHHHHHHHHHH----------CCCCEEEEECCCCCH----------HHHHHCCCCCCEEE
T ss_conf 230-47888876664----------269999995699767----------89985599988798
No 92
>d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]}
Probab=43.03 E-value=7.2 Score=14.91 Aligned_cols=74 Identities=22% Similarity=0.276 Sum_probs=35.9
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH--
Q ss_conf 289998478425899999986305975899972100111103679999999974100357677758999516888444--
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED-- 223 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eD-- 223 (529)
.+||||+=+ |. +.+.++.+++ ..+++.+... +.+ ...+|.||| =||+|-.+
T Consensus 2 ~~igv~~~~-G~-~~~~~~al~~-~G~~~~~i~~-------~~~----------------l~~~D~lIl-PGG~~~~~~~ 54 (195)
T d2nv0a1 2 LTIGVLGLQ-GA-VREHIHAIEA-CGAAGLVVKR-------PEQ----------------LNEVDGLIL-PGGESTTMRR 54 (195)
T ss_dssp CEEEEECSS-SC-CHHHHHHHHH-TTCEEEEECS-------GGG----------------GGGCSEEEE-CCSCHHHHHH
T ss_pred CEEEEEECC-CH-HHHHHHHHHH-CCCCEEEECC-------HHH----------------HHHCCEEEE-CCCCCCHHHH
T ss_conf 299999628-82-9999999998-7991999899-------899----------------831887997-7998447999
Q ss_pred -HHHCCHHHHHHHHHHCCCEEEEEE
Q ss_conf -220076999999974890488520
Q gi|254780791|r 224 -LWHFNDEMIVRAIANSSIPIISAI 247 (529)
Q Consensus 224 -L~~FN~e~laraI~~~~iPVisgI 247 (529)
++--+-.+..+...+...|+ -||
T Consensus 55 ~~~~~~~~~~I~~~~~~g~pi-lGI 78 (195)
T d2nv0a1 55 LIDTYQFMEPLREFAAQGKPM-FGT 78 (195)
T ss_dssp HHHHTTCHHHHHHHHHTTCCE-EEE
T ss_pred HHHHCHHCCHHHHHHHHCCEE-EEC
T ss_conf 744310010344332202124-400
No 93
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=42.92 E-value=7.2 Score=14.90 Aligned_cols=85 Identities=24% Similarity=0.340 Sum_probs=47.8
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHH
Q ss_conf 28999847842589999998630597589997210011110367999999997410035767775899951688844422
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~ 225 (529)
|||-||-- -..+.+++..+=+.+++++.... -|+ +|+..+... .||+|++--. |-
T Consensus 1 KrILiVdD--d~~~~~~l~~~L~~~g~~v~~a~---~~~-------eal~~~~~~-------~~dlillD~~------mp 55 (117)
T d2a9pa1 1 KKILIVDD--EKPISDIIKFNMTKEGYEVVTAF---NGR-------EALEQFEAE-------QPDIIILDLM------LP 55 (117)
T ss_dssp CEEEEECS--CHHHHHHHHHHHHHTTCEEEEES---SHH-------HHHHHHHHH-------CCSEEEECSS------CS
T ss_pred CEEEEEEC--CHHHHHHHHHHHHHCCCEEEEEC---CHH-------HHHHHHHHC-------CCCEEEECCC------CC
T ss_conf 98999979--99999999999998799999987---879-------999999836-------9878985045------57
Q ss_pred HCCHHHHHHHHHHCC-CEEEEEECCCCCCHH
Q ss_conf 007699999997489-048852057775258
Q gi|254780791|r 226 HFNDEMIVRAIANSS-IPIISAIGHETDWTL 255 (529)
Q Consensus 226 ~FN~e~laraI~~~~-iPVisgIGHE~D~Tl 255 (529)
..|-.++++.|...+ +|||.=.||..+...
T Consensus 56 ~~~G~~~~~~i~~~~~~pvI~lt~~~~~~~~ 86 (117)
T d2a9pa1 56 EIDGLEVAKTIRKTSSVPILMLSAKDSEFDK 86 (117)
T ss_dssp SSCHHHHHHHHHTTCCCCEEEEESCCSHHHH
T ss_pred CCCCCHHHHHHHHCCCCCEEEEECCCCHHHH
T ss_conf 9996289999986799988999668999999
No 94
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=42.78 E-value=7.2 Score=14.88 Aligned_cols=34 Identities=15% Similarity=0.279 Sum_probs=27.8
Q ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 10265289998478425899999986305975899
Q gi|254780791|r 141 IPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI 175 (529)
Q Consensus 141 lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~ 175 (529)
-|.|+|+|+| +++.|+|--=+++.|+.+|++.++
T Consensus 3 ~~~~~K~I~i-~G~~GsGKTTla~~La~~~~~~~i 36 (192)
T d1lw7a2 3 RPFFAKTVAI-LGGESSGKSVLVNKLAAVFNTTSA 36 (192)
T ss_dssp GGGTCEEEEE-ECCTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCEEEEE-ECCCCCCHHHHHHHHHHHHCCCEE
T ss_conf 7766328999-899999899999999998499867
No 95
>d1duvg1 c.78.1.1 (G:1-150) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=42.68 E-value=7.3 Score=14.87 Aligned_cols=96 Identities=22% Similarity=0.234 Sum_probs=51.1
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEE---CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
Q ss_conf 0265289998478425899999986305975899972---1001111036799999999741003576777589995168
Q gi|254780791|r 142 PFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP---VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218 (529)
Q Consensus 142 P~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p---~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGG 218 (529)
+.-.+.|+.+=-+.+-==+==-.....+-+.+++.+. +.++ -.+++...++.+..+ +|+ |++|+.
T Consensus 41 ~L~gk~v~~lF~epSTRTR~SFe~A~~~LG~~~i~~~~~~ss~~---kgEs~~Dt~~~ls~~--------~d~-iv~R~~ 108 (150)
T d1duvg1 41 KLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIG---HKESIKDTARVLGRM--------YDG-IQYRGY 108 (150)
T ss_dssp SCTTCEEEEEESSCCSHHHHHHHHHHHHTTCEEEEECSSSSCBT---TTBCHHHHHHHHTTT--------CSE-EEEECS
T ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHEECCCCEEECCCCCCCCC---CCCCHHHHHHHHHHC--------CCE-EEEECC
T ss_conf 47886788874279703354431012014762342355313344---463057899998743--------756-887225
Q ss_pred CCHHHHHHCCHHHHHHHHHHCCCEEEEEEC---CCCCCHHHHHH
Q ss_conf 884442200769999999748904885205---77752589886
Q gi|254780791|r 219 GSIEDLWHFNDEMIVRAIANSSIPIISAIG---HETDWTLADYA 259 (529)
Q Consensus 219 GS~eDL~~FN~e~laraI~~~~iPVisgIG---HE~D~Tl~D~V 259 (529)
++..+......+.+|||-|-| |=|= .|+|+.
T Consensus 109 ---------~~~~~~~~~~~~~~pviNg~~~~~HPtQ-~L~Dl~ 142 (150)
T d1duvg1 109 ---------GQEIVETLAEYASVPVWNGLTNEFHPTQ-LLADLL 142 (150)
T ss_dssp ---------CHHHHHHHHHHHSSCEEESCCSSCCHHH-HHHHHH
T ss_pred ---------CCCCHHHCCCCCCEEEECCCCCCCCHHH-HHHHHH
T ss_conf ---------6631211114264338808888887269-999999
No 96
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=42.42 E-value=7.3 Score=14.84 Aligned_cols=43 Identities=14% Similarity=0.171 Sum_probs=21.8
Q ss_pred CCCCEEEEECCCCCHHHH----HHCCHHHHHHHHHHCCCEEE-EEECCC
Q ss_conf 777589995168884442----20076999999974890488-520577
Q gi|254780791|r 207 PRPDIIILARGGGSIEDL----WHFNDEMIVRAIANSSIPII-SAIGHE 250 (529)
Q Consensus 207 ~~~D~iii~RGGGS~eDL----~~FN~e~laraI~~~~iPVi-sgIGHE 250 (529)
..+|.||| =|.||..+- -.-+-.+..+..++..+||+ .-.||.
T Consensus 41 ~~~D~lIl-PG~G~f~~~~~~l~~~~~~~~i~~~~~~~~PiLGIClG~Q 88 (200)
T d1k9vf_ 41 DLYDLLFI-PGVGHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQ 88 (200)
T ss_dssp CCCSEEEE-CCCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHH
T ss_pred HCCCEEEE-CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEE
T ss_conf 00574797-1707878888753102331212111345515898732426
No 97
>d1vi6a_ c.23.15.1 (A:) Ribosomal protein S2 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=42.38 E-value=7.3 Score=14.83 Aligned_cols=133 Identities=15% Similarity=0.129 Sum_probs=72.7
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHH
Q ss_conf 00799999999997654012261001631026528999847842589999998630597589997210011110367999
Q gi|254780791|r 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192 (529)
Q Consensus 113 ~G~l~~~~e~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ 192 (529)
+=+|.+-.+.|++-+.- .. + + -+.+|-+|.....+ ++.+...+.+.+...+ . |.=-+..+.+
T Consensus 41 IIdL~kT~~~L~~A~~~---l~---~--~--~~~~ILfVgtk~~~--~~~v~~~A~~~g~~~v-~-----~RWlgG~LTN 102 (193)
T d1vi6a_ 41 VLDIRKLDERIRVAAKF---LS---R--Y--EPSKILLVAARQYA--HKPVQMFSKVVGSDYI-V-----GRFIPGTLTN 102 (193)
T ss_dssp EECHHHHHHHHHHHHHH---HT---T--S--CGGGEEEEECSGGG--HHHHHHHHHHHCCEEE-E-----SSCCTTTTTC
T ss_pred EEEHHHHHHHHHHHHHH---HH---H--H--CCCCEEEEECCCCH--HHHHHHHHHHCCCCCC-C-----CCCCCCCCCC
T ss_conf 96699999999999999---97---7--4--26752776226216--7899999986399854-4-----5345774331
Q ss_pred HHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHH
Q ss_conf 99999741003576777589995168884442200769999999748904885205777525898864123777214567
Q gi|254780791|r 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272 (529)
Q Consensus 193 ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPTaAAE 272 (529)
.+ ......||++||+ .+-.|...++.-..+.||||+=+---.|-+.+||+
T Consensus 103 ~~--------~~~~~~P~~liv~---------dp~~d~~ai~Ea~~l~IPvI~ivDTn~~p~~vdy~------------- 152 (193)
T d1vi6a_ 103 PM--------LSEYREPEVVFVN---------DPAIDKQAVSEATAVGIPVVALCDSNNSSADVDLV------------- 152 (193)
T ss_dssp TT--------STTCCCCSEEEES---------CTTTTHHHHHHHHHTTCCEEEEECTTCCCTTCSEE-------------
T ss_pred HH--------HHHCCCCEEEEEE---------CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEE-------------
T ss_conf 67--------7520555189997---------68610789999987389726673167998524468-------------
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 63323467776699999888778
Q gi|254780791|r 273 MAVPVKEHLQSSLINLEARLNNI 295 (529)
Q Consensus 273 lavp~~~EL~~~L~~l~~RL~~a 295 (529)
+|..++-...+.-+..-|.++
T Consensus 153 --IP~Ndds~~Si~li~~~l~~a 173 (193)
T d1vi6a_ 153 --IPTNNKGRRALAIVYWLLARE 173 (193)
T ss_dssp --EESCCSCHHHHHHHHHHHHHH
T ss_pred --EECCCCHHHHHHHHHHHHHHH
T ss_conf --868887387999999999999
No 98
>d1mkza_ c.57.1.1 (A:) MoaB {Escherichia coli [TaxId: 562]}
Probab=41.93 E-value=7.4 Score=14.78 Aligned_cols=75 Identities=16% Similarity=0.170 Sum_probs=36.9
Q ss_pred CCCCCCCCEEEEEECCCHHHH-----HHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 631026528999847842589-----999998630597589997210011110367999999997410035767775899
Q gi|254780791|r 139 NPIPFIPKIIAVITSPTGAVI-----RDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 (529)
Q Consensus 139 ~~lP~~p~~i~vits~~~a~~-----~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii 213 (529)
...++-|-||||||-.+.++. .-++.-+-..+++++.-+.+.-- -...+..++....... .+|+ |
T Consensus 2 ~~~~f~p~rvaiitvsD~~g~~~D~nGp~L~~~l~~~G~~v~~~~iv~D---d~~~~~~~l~~~~~~~------~~dl-I 71 (170)
T d1mkza_ 2 VSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDKAIVKE---NRYAIRAQVSAWIASD------DVQV-V 71 (170)
T ss_dssp CCSSCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEEEEECS---CHHHHHHHHHHHHHSS------SCCE-E
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECC---CHHHHHHHHHHHHHCC------CCEE-E
T ss_conf 8777577569999972889867777699999999987997877555178---7799999997655305------6448-8
Q ss_pred EECCCCCHHH
Q ss_conf 9516888444
Q gi|254780791|r 214 LARGGGSIED 223 (529)
Q Consensus 214 i~RGGGS~eD 223 (529)
|.=||=|..+
T Consensus 72 iTtGGtg~g~ 81 (170)
T d1mkza_ 72 LITGGTGLTE 81 (170)
T ss_dssp EEESCCSSST
T ss_pred EEEEEECCCC
T ss_conf 8840003466
No 99
>d1gqoa_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Bacillus subtilis [TaxId: 1423]}
Probab=41.82 E-value=7.5 Score=14.77 Aligned_cols=69 Identities=19% Similarity=0.349 Sum_probs=50.3
Q ss_pred HHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHH
Q ss_conf 89999998630---597589997210011110367999999997410035767775899951688844422007699999
Q gi|254780791|r 158 VIRDILQRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 (529)
Q Consensus 158 ~~~D~~~~~~~---r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~lar 234 (529)
-+.|+-..++. ...+++..|-+=..| +++..|.... + .+|-|||-=|| |..-+..+..
T Consensus 26 TL~~i~~~~~~~a~~~~i~l~~~QSN~Eg-----elI~~I~~~~--~------~~dgiIiNPga------~thtS~al~D 86 (141)
T d1gqoa_ 26 TLTDIETDLFQFAEALHIQLTFFQSNHEG-----DLIDAIHEAE--E------QYSGIVLNPGA------LSHYSYAIRD 86 (141)
T ss_dssp CHHHHHHHHHHHHHHHTCEEEEEECSCHH-----HHHHHHHHHT--T------TCSEEEEECGG------GGGTCHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEHHHHHH-----HHHHHHHHHH--H------CCCEEEECCHH------HHHHHHHHHH
T ss_conf 99999999999999749736650565799-----9999999853--2------23323545346------6445666799
Q ss_pred HHHHCCCEEEE
Q ss_conf 99748904885
Q gi|254780791|r 235 AIANSSIPIIS 245 (529)
Q Consensus 235 aI~~~~iPVis 245 (529)
|+..+.+|+|-
T Consensus 87 al~~~~~P~iE 97 (141)
T d1gqoa_ 87 AVSSISLPVVE 97 (141)
T ss_dssp HHHTSCSCEEE
T ss_pred HHHHCCCCEEE
T ss_conf 99865998899
No 100
>d2gy9i1 d.14.1.1 (I:4-129) Ribosomal protein S9 {Escherichia coli [TaxId: 562]}
Probab=41.64 E-value=6.7 Score=15.17 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHC
Q ss_conf 799999999741003576777589995168884442200769999999748
Q gi|254780791|r 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 (529)
Q Consensus 189 ~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~ 239 (529)
.+..-+...+.. ..||+.|.++|||-..-- .==--.+|||+...
T Consensus 43 ~~~~pl~~~~~~------~~~di~v~V~GGG~sgQa-~Air~aIaRaLv~~ 86 (126)
T d2gy9i1 43 VVRQPLELVDMV------EKLDLYITVKGGGISGQA-GAIRHGITRALMEY 86 (126)
T ss_dssp GGGHHHHHTTCG------GGEEEEEEEESSCHHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC------CCEEEEEEEECCCCHHHH-HHHHHHHHHHHHHH
T ss_conf 997678763655------514689998469813589-89999999999886
No 101
>d2i4ra1 c.149.1.1 (A:4-79) V-type ATP synthase subunit F, AtpF {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=41.36 E-value=7.6 Score=14.71 Aligned_cols=52 Identities=15% Similarity=0.267 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEEC
Q ss_conf 1036799999999741003576777589995168884442200769999999748904885205
Q gi|254780791|r 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 (529)
Q Consensus 185 ~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIG 248 (529)
..+.++.++|+.+-.+. .+-+|+| .|+++.==.+.+-+.+.++-+|.|..||
T Consensus 25 ~~~ee~~~~i~~~~~~~------digII~I------te~~a~~i~~~i~~~~~~~~~P~Vi~Ig 76 (76)
T d2i4ra1 25 TSDEEIVKAVEDVLKRD------DVGVVIM------KQEYLKKLPPVLRREIDEKVEPTFVSVG 76 (76)
T ss_dssp CSHHHHHHHHHHHHHCS------SEEEEEE------EGGGSTTSCHHHHTTTTTCCSSEEEEEC
T ss_pred CCHHHHHHHHHHHHCCC------CEEEEEE------EHHHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf 99899999999985079------8589997------0899987459999998667888799559
No 102
>d1c0ma1 b.34.7.1 (A:217-269) DNA-binding domain of retroviral integrase {Rous sarcoma virus RSV [TaxId: 11886]}
Probab=40.86 E-value=7.1 Score=14.95 Aligned_cols=16 Identities=25% Similarity=0.727 Sum_probs=10.0
Q ss_pred HCCCEEEEECCC-CCEE
Q ss_conf 314619998489-8895
Q gi|254780791|r 458 LKRGYTSIQDTN-NNFI 473 (529)
Q Consensus 458 L~RGYaiv~~~~-GkiI 473 (529)
--||||.|.+.+ |+++
T Consensus 26 ~GRGYAavk~~~~~~v~ 42 (53)
T d1c0ma1 26 WGRGYAAVKNRDTDKVI 42 (53)
T ss_dssp ECSSEEEEEETTTCCEE
T ss_pred ECCEEEEEECCCCCEEE
T ss_conf 74505888606787099
No 103
>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}
Probab=40.51 E-value=7.8 Score=14.61 Aligned_cols=84 Identities=14% Similarity=0.201 Sum_probs=46.0
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
Q ss_conf 52899984784258999999863059758999721001111036799999999741003576777589995168884442
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL 224 (529)
|.||-||-- -..+.+++...=+.+++++..+.. |. .|++.+... ..||+||+=-. |
T Consensus 2 p~rILvVdD--d~~~~~~l~~~L~~~g~~v~~~~~---~~-------~al~~l~~~------~~~dliilD~~------l 57 (118)
T d2b4aa1 2 PFRVTLVED--EPSHATLIQYHLNQLGAEVTVHPS---GS-------AFFQHRSQL------STCDLLIVSDQ------L 57 (118)
T ss_dssp CCEEEEECS--CHHHHHHHHHHHHHTTCEEEEESS---HH-------HHHHTGGGG------GSCSEEEEETT------C
T ss_pred CCEEEEEEC--CHHHHHHHHHHHHHCCCCEEEECC---HH-------HHHHHHHHC------CCCCEEEEECC------C
T ss_conf 987999989--899999999999962997299798---99-------999999834------99989999589------9
Q ss_pred HHCCHHHHHHHHHHC--CCE--EEEEECCCCC
Q ss_conf 200769999999748--904--8852057775
Q gi|254780791|r 225 WHFNDEMIVRAIANS--SIP--IISAIGHETD 252 (529)
Q Consensus 225 ~~FN~e~laraI~~~--~iP--VisgIGHE~D 252 (529)
=..|-.++++.|-+. .+| ++||-+++.+
T Consensus 58 p~~~G~el~~~ir~~~~~~pii~lt~~~~~~~ 89 (118)
T d2b4aa1 58 VDLSIFSLLDIVKEQTKQPSVLILTTGRHELI 89 (118)
T ss_dssp TTSCHHHHHHHHTTSSSCCEEEEEESCC--CC
T ss_pred CCCCHHHHHHHHHHCCCCCCEEEEECCCCHHH
T ss_conf 99978999999996299796999989963999
No 104
>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}
Probab=40.28 E-value=7.8 Score=14.58 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=34.0
Q ss_pred EEEEEEECCCCC----CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH-----HHHHHCCHHHHHHHHHH--CC
Q ss_conf 589997210011----11036799999999741003576777589995168884-----44220076999999974--89
Q gi|254780791|r 172 LRVIIFPVKVQG----DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI-----EDLWHFNDEMIVRAIAN--SS 240 (529)
Q Consensus 172 ~~~~~~p~~vQG----~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~-----eDL~~FN~e~laraI~~--~~ 240 (529)
+-|..+...|-| .....-++++++.+.+.. .=+|.++=+||.. ..|+.+.. +.+.++. ..
T Consensus 90 v~v~a~Dftv~gGS~g~~~~~K~~r~~e~A~~~~-------lPlI~l~dsgGarm~e~~~~~~~~~~--~~~~~~~~s~~ 160 (258)
T d1xnya1 90 VAVFSQDFTVFGGALGEVYGQKIVKVMDFALKTG-------CPVVGINDSGGARIQEGVASLGAYGE--IFRRNTHASGV 160 (258)
T ss_dssp EEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHHT-------CCEEEEECCCSBCGGGTHHHHHHHHH--HHHHHHHTTTT
T ss_pred EEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHCC-------CCEEEEECCCCCCCCCCCCCCCCHHH--HHHHHHHHCCC
T ss_conf 8887322343357321233799999999999719-------86599863788666755002332468--99999987489
Q ss_pred CEEEEEECCC
Q ss_conf 0488520577
Q gi|254780791|r 241 IPIISAIGHE 250 (529)
Q Consensus 241 iPVisgIGHE 250 (529)
||+|+.|--.
T Consensus 161 vP~I~vv~G~ 170 (258)
T d1xnya1 161 IPQISLVVGP 170 (258)
T ss_dssp SCEEEEECSE
T ss_pred CCEEEEECCC
T ss_conf 9889998078
No 105
>d2a9va1 c.23.16.1 (A:1-196) GMP synthase subunit A, GuaAA {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=39.88 E-value=7.9 Score=14.54 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=19.4
Q ss_pred CCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEE
Q ss_conf 7758999516888444220076999999974890488
Q gi|254780791|r 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 (529)
Q Consensus 208 ~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVi 244 (529)
.+|.|||.=|.|+..|-... -..+.+.+.+..+||+
T Consensus 42 ~~dgiIl~Gg~~~~~~~~~~-~~~l~~~~~~~~~Pil 77 (196)
T d2a9va1 42 GLDGLVLSGGAPNIDEELDK-LGSVGKYIDDHNYPIL 77 (196)
T ss_dssp TCSEEEEEEECSCGGGTGGG-HHHHHHHHHHCCSCEE
T ss_pred CCCCEEEECCCCCCCCCCCH-HHHHHHHHHHCCCEEE
T ss_conf 68807993365311102102-4557777752581589
No 106
>d2j6ba1 d.321.1.1 (A:1-109) Afv3-109 {Acidianus filamentous virus 1 [TaxId: 235266]}
Probab=39.67 E-value=6.5 Score=15.30 Aligned_cols=24 Identities=29% Similarity=0.408 Sum_probs=10.9
Q ss_pred EEEEEECCCCCCHHHHHHHCCCCC
Q ss_conf 488520577752589886412377
Q gi|254780791|r 242 PIISAIGHETDWTLADYAADLRAP 265 (529)
Q Consensus 242 PVisgIGHE~D~Tl~D~VAD~Ra~ 265 (529)
+.||||||+----+.-...+++.|
T Consensus 38 ~~iSaIGH~aTAqlls~Llgv~i~ 61 (109)
T d2j6ba1 38 QFTSAIGHQATAELLSSILGVNVP 61 (109)
T ss_dssp CEEECBCSHHHHHHHHHHHTSCCC
T ss_pred CEEEECCCHHHHHHHHHHHCCCCC
T ss_conf 513311529899999998586324
No 107
>d1pvva1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=39.41 E-value=8 Score=14.48 Aligned_cols=97 Identities=18% Similarity=0.198 Sum_probs=48.3
Q ss_pred CCCCEEEEEECCCHH-HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 265289998478425-8999999863059758999721001111036799999999741003576777589995168884
Q gi|254780791|r 143 FIPKIIAVITSPTGA-VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 143 ~~p~~i~vits~~~a-~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
.--+.|+.+=-+.+- -.-=| .....+-+.+++.+...--.-+-.+++...++.++.+ +| +|++|+.
T Consensus 43 l~~k~~~~lF~epSTRTR~SF-e~A~~~LG~~~i~~~~~~ss~~kgEs~~Dt~~~ls~~--------~D-~iv~R~~--- 109 (150)
T d1pvva1 43 LEGKTLAMIFQKPSTRTRVSF-EVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRY--------VD-AIMARVY--- 109 (150)
T ss_dssp TTTCEEEEEESSCCSHHHHHH-HHHHHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTT--------CS-EEEEECS---
T ss_pred CCCCEEEEEEECCCCCHHHHH-HHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHCC--------CC-EEEEECC---
T ss_conf 489746887506874137899-9889864984674375412323688789999999727--------88-3424546---
Q ss_pred HHHHHCCHHHHHHHHHHCCCEEEEEEC---CCCCCHHHHHH
Q ss_conf 442200769999999748904885205---77752589886
Q gi|254780791|r 222 EDLWHFNDEMIVRAIANSSIPIISAIG---HETDWTLADYA 259 (529)
Q Consensus 222 eDL~~FN~e~laraI~~~~iPVisgIG---HE~D~Tl~D~V 259 (529)
++..+-...-.+.+|||-|-| |=| -.|+|+-
T Consensus 110 ------~~~~~~~~a~~~~~pvINg~~~~~HPt-QaL~D~~ 143 (150)
T d1pvva1 110 ------DHKDVEDLAKYATVPVINGLSDFSHPC-QALADYM 143 (150)
T ss_dssp ------SHHHHHHHHHHCSSCEEEEECSSCCHH-HHHHHHH
T ss_pred ------CHHHHHHHHHHCCCCEEECCCCCCCCH-HHHHHHH
T ss_conf ------715799999856988884999998717-9999999
No 108
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=39.14 E-value=6.5 Score=15.28 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=9.5
Q ss_pred CCCEEEEECCCCCHHHHHH
Q ss_conf 7758999516888444220
Q gi|254780791|r 208 RPDIIILARGGGSIEDLWH 226 (529)
Q Consensus 208 ~~D~iii~RGGGS~eDL~~ 226 (529)
+|||||| |||. .-|.|
T Consensus 3 kYDviII--GgGp-AGl~a 18 (229)
T d3lada1 3 KFDVIVI--GAGP-GGYVA 18 (229)
T ss_dssp CCSEEEE--CCSH-HHHHH
T ss_pred CCCEEEE--CCCH-HHHHH
T ss_conf 3899998--9688-99999
No 109
>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=39.08 E-value=8.1 Score=14.44 Aligned_cols=80 Identities=19% Similarity=0.214 Sum_probs=46.6
Q ss_pred CCCCEEEEEEC-CC-HHHHHHHHHHHHHCCCEEEE-EEE--CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
Q ss_conf 26528999847-84-25899999986305975899-972--100111103679999999974100357677758999516
Q gi|254780791|r 143 FIPKIIAVITS-PT-GAVIRDILQRISCRFPLRVI-IFP--VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG 217 (529)
Q Consensus 143 ~~p~~i~vits-~~-~a~~~D~~~~~~~r~p~~~~-~~p--~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RG 217 (529)
+-|++||||-. .+ +..=..+++.+...+..+|+ +-| ..|.|..+-.+|.+ .. ..+|+++|++.
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~d-------lp-----~~vDlvvi~vp 73 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKD-------IP-----DEIDLAIIVVP 73 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTS-------CS-----SCCSEEEECSC
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCHHH-------CC-----CCCCEEEEECC
T ss_conf 7998599983479998708999999997499708996267623088486653533-------57-----78866788448
Q ss_pred CCCHHHHHHCCHHHHHHHHHHCCCE
Q ss_conf 8884442200769999999748904
Q gi|254780791|r 218 GGSIEDLWHFNDEMIVRAIANSSIP 242 (529)
Q Consensus 218 GGS~eDL~~FN~e~laraI~~~~iP 242 (529)
--...+ +.+...+..++
T Consensus 74 ~~~~~~--------~~~~~~~~g~~ 90 (129)
T d2csua1 74 KRFVKD--------TLIQCGEKGVK 90 (129)
T ss_dssp HHHHHH--------HHHHHHHHTCC
T ss_pred HHHHHH--------HHHHHHHCCCC
T ss_conf 677088--------89999973998
No 110
>d1h05a_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=38.95 E-value=8.1 Score=14.43 Aligned_cols=68 Identities=19% Similarity=0.297 Sum_probs=51.2
Q ss_pred HHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHH
Q ss_conf 9999998630---5975899972100111103679999999974100357677758999516888444220076999999
Q gi|254780791|r 159 IRDILQRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 (529)
Q Consensus 159 ~~D~~~~~~~---r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~lara 235 (529)
+.|+.+.++. ..++++..+-+=..| ++++.|..... .+|.|||-=|| |..-...+-.|
T Consensus 27 L~~i~~~~~~~a~~~g~~l~~~QSN~Eg-----elI~~I~~~~~--------~~dgiIiNPga------~ThtS~al~Da 87 (144)
T d1h05a_ 27 HDELVALIEREAAELGLKAVVRQSDSEA-----QLLDWIHQAAD--------AAEPVILNAGG------LTHTSVALRDA 87 (144)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCHH-----HHHHHHHHHHH--------HTCCEEEECGG------GGGTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCEEEEHHHHHHH-----HHHHHHHHHHH--------CCCCCEECCCC------CEEEEEEHHHH
T ss_conf 9999999999999829657641555799-----99999998755--------14761544621------04532015989
Q ss_pred HHHCCCEEEE
Q ss_conf 9748904885
Q gi|254780791|r 236 IANSSIPIIS 245 (529)
Q Consensus 236 I~~~~iPVis 245 (529)
+..+++|+|-
T Consensus 88 l~~~~~P~iE 97 (144)
T d1h05a_ 88 CAELSAPLIE 97 (144)
T ss_dssp HHTCCSCEEE
T ss_pred HHHCCCCEEE
T ss_conf 9872897799
No 111
>d2at2a1 c.78.1.1 (A:1-144) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}
Probab=38.50 E-value=8.2 Score=14.38 Aligned_cols=56 Identities=23% Similarity=0.378 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEE-EC-CC-CCCHHHHHH
Q ss_conf 367999999997410035767775899951688844422007699999997489048852-05-77-752589886
Q gi|254780791|r 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA-IG-HE-TDWTLADYA 259 (529)
Q Consensus 187 ~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisg-IG-HE-~D~Tl~D~V 259 (529)
.+++...+..+..+. +|+| ++|+- +++.+-...-.+.+|||.| =| || .=-.|+|+-
T Consensus 78 gEs~~d~~~~l~~~~-------~d~i-v~R~~---------~~~~~~~~a~~~~vPvINag~~~~~HP~Q~LaD~~ 136 (144)
T d2at2a1 78 GETLYDTIRTLESIG-------VDVC-VIRHS---------EDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLM 136 (144)
T ss_pred CHHHHHHHHHHHHCC-------EEEE-EEECC---------CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 067899998774145-------0477-75033---------33321222445744589888999976289999999
No 112
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=38.48 E-value=8.3 Score=14.37 Aligned_cols=85 Identities=22% Similarity=0.200 Sum_probs=46.1
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
Q ss_conf 52899984784258999999863059758999721001111036799999999741003576777589995168884442
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL 224 (529)
.+||-||- +-..++.+++..=.+++++|...... -.|++.+... .||+||+==.-.
T Consensus 2 ~krILiVD--Dd~~~~~~l~~~L~~~g~~v~~a~~~----------~~al~~l~~~-------~~dlillD~~mp----- 57 (121)
T d1mvoa_ 2 NKKILVVD--DEESIVTLLQYNLERSGYDVITASDG----------EEALKKAETE-------KPDLIVLDVMLP----- 57 (121)
T ss_dssp CCEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESSH----------HHHHHHHHHH-------CCSEEEEESSCS-----
T ss_pred CCCEEEEE--CCHHHHHHHHHHHHHCCCEEEEECCH----------HHHHHHHHCC-------CCCEEEECCCCC-----
T ss_conf 98799998--99999999999999889999998788----------9999987435-------665897314546-----
Q ss_pred HHCCHHHHHHHHHH----CCCEEEEEECCCCCCH
Q ss_conf 20076999999974----8904885205777525
Q gi|254780791|r 225 WHFNDEMIVRAIAN----SSIPIISAIGHETDWT 254 (529)
Q Consensus 225 ~~FN~e~laraI~~----~~iPVisgIGHE~D~T 254 (529)
-.|-.++++.+-. .|++++||-+.+.+..
T Consensus 58 -~~~G~~~~~~~r~~~~~~~ii~lt~~~~~~~~~ 90 (121)
T d1mvoa_ 58 -KLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKV 90 (121)
T ss_dssp -SSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHH
T ss_pred -CCCCCHHHHHHHCCCCCCEEEEEEEECCHHHHH
T ss_conf -999823665531058998899998138999999
No 113
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]}
Probab=38.10 E-value=8.4 Score=14.32 Aligned_cols=52 Identities=25% Similarity=0.340 Sum_probs=32.1
Q ss_pred CCEEEEECCCCCHH----HHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCHH
Q ss_conf 75899951688844----42200769999999748904885205777525898864123777214
Q gi|254780791|r 209 PDIIILARGGGSIE----DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 (529)
Q Consensus 209 ~D~iii~RGGGS~e----DL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPTa 269 (529)
.|.|+|+||-.+.| ++-..-.+ +.+..-....|||+|-- .|--| ..-|+||-
T Consensus 156 sDgImIaRGDLg~ei~~e~vp~~Qk~-Ii~~~~~~~kpvivATq-----~LeSM---~~~~~PTR 211 (258)
T d1pkla2 156 SDGIMVARGDLGVEIPAEKVVVAQKI-LISKCNVAGKPVICATQ-----MLESM---TYNPRPTR 211 (258)
T ss_dssp SSEEEECHHHHTTTSCHHHHHHHHHH-HHHHHHHHTCCEEECSS-----SSGGG---GTSSSCCH
T ss_pred CCEEEEECHHHHHHCCHHHHHHHHHH-HHHHHHHCCCCEEEEEC-----EEHHH---CCCCCCCH
T ss_conf 77456743356653465454667899-99999973998799711-----10754---46999988
No 114
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]}
Probab=38.08 E-value=8.4 Score=14.32 Aligned_cols=51 Identities=12% Similarity=0.174 Sum_probs=28.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 01111036799999999741003576777589995168884442200769999999748904885
Q gi|254780791|r 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 181 vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
+.+......|++..+.. .+|+||+++-|-+..-|.. . .-+.+..++.||+.
T Consensus 85 ~~~~~~~~~I~~~a~~~----------~~dliV~G~~~~~~~~lgs-~---~~~li~~~~~pVli 135 (140)
T d1jmva_ 85 SGSGDLGQVLSDAIEQY----------DVDLLVTGHHQDFWSKLMS-S---TRQVMNTIKIDMLV 135 (140)
T ss_dssp EEEECHHHHHHHHHHHT----------TCCEEEEEECCCCHHHHHH-H---HHHHHTTCCSEEEE
T ss_pred EEECCHHHHHHHHHHHC----------HHHEEEECCCCCCCCCCCC-H---HHHHHHCCCCCEEE
T ss_conf 98168899999864003----------1428884058999777353-9---99998616998999
No 115
>d1gpma2 c.23.16.1 (A:3-207) GMP synthetase {Escherichia coli [TaxId: 562]}
Probab=37.77 E-value=7 Score=15.02 Aligned_cols=78 Identities=14% Similarity=0.151 Sum_probs=43.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH
Q ss_conf 65289998478425899999986305975899972100111103679999999974100357677758999516888444
Q gi|254780791|r 144 IPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 (529)
Q Consensus 144 ~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eD 223 (529)
..+||+||-=-++. .+=|.+.+++.. +...++|-.. ...+ +..+ .+|.|++.=|.|+..|
T Consensus 4 ~~~kI~IiD~G~~~-~~~I~r~lr~lg-~~~~I~~~d~----~~~~----~~~~----------~~~giils~gp~~~~~ 63 (205)
T d1gpma2 4 HKHRILILDFGSQY-TQLVARRVRELG-VYCELWAWDV----TEAQ----IRDF----------NPSGIILSGGPESTTE 63 (205)
T ss_dssp TSSEEEEEECSCTT-HHHHHHHHHHTT-CEEEEEESCC----CHHH----HHHH----------CCSEEEECCCSSCTTS
T ss_pred CCCEEEEEECCCHH-HHHHHHHHHHCC-CEEEEECCCC----CHHH----HHHC----------CCCEEEECCCCCCCCH
T ss_conf 64819999898649-999999999879-8899987999----9899----7201----------8986785698875410
Q ss_pred HHHCCHHHHHHHHHHCCCEEE
Q ss_conf 220076999999974890488
Q gi|254780791|r 224 LWHFNDEMIVRAIANSSIPII 244 (529)
Q Consensus 224 L~~FN~e~laraI~~~~iPVi 244 (529)
-.... +...+.+..+||+
T Consensus 64 ~~~~~---~~~~~~~~~~PiL 81 (205)
T d1gpma2 64 ENSPR---APQYVFEAGVPVF 81 (205)
T ss_dssp TTCCC---CCGGGGTSSSCEE
T ss_pred HHHHH---HHHHHHHCCCCEE
T ss_conf 12346---7899970799889
No 116
>d1lcya2 b.47.1.1 (A:6-210) Mitochondrial serine protease HtrA2, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.59 E-value=8.5 Score=14.26 Aligned_cols=17 Identities=18% Similarity=0.331 Sum_probs=9.5
Q ss_pred HHHHHHHHHCCCC-EEEE
Q ss_conf 9999997400171-8999
Q gi|254780791|r 22 YHLKHIVESNLSH-VCVR 38 (529)
Q Consensus 22 ~~i~~~l~~~~~~-~~v~ 38 (529)
++|.+++|..-+. |.|.
T Consensus 10 ~~~~~~~e~~~~sVV~I~ 27 (205)
T d1lcya2 10 NFIADVVEKTAPAVVYIE 27 (205)
T ss_dssp CHHHHHHHHHGGGEEEEE
T ss_pred CHHHHHHHHHCCCEEEEE
T ss_conf 679999998439589999
No 117
>d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]}
Probab=37.36 E-value=8.6 Score=14.23 Aligned_cols=56 Identities=14% Similarity=0.140 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHH-HHHHCCH--HHHHHHHHHCCCEEEEE
Q ss_conf 0367999999997410035767775899951688844-4220076--99999997489048852
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE-DLWHFND--EMIVRAIANSSIPIISA 246 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~e-DL~~FN~--e~laraI~~~~iPVisg 246 (529)
|...+++|++-+-.+.. ++..|+.+=--|+.| +.|.|-+ +.+..+--.+.+|||+|
T Consensus 74 a~~aV~Eavrnl~a~GA-----~P~ai~d~LnFg~Pe~~~~~~~~~v~gl~~~~~~~~iPvVgG 132 (162)
T d1vk3a2 74 TLIAVLESVRKTLSVGA-----EPLAITNCVNYGDPDVDPVGLSAMMTALKNACEFSGVPVASG 132 (162)
T ss_dssp HHHHHHHHHHHHHHTTC-----EEEEEEEEEECSCTTTCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHCCC-----HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 77899999987551351-----678878765268889988999999999999999809982155
No 118
>d1hska1 d.145.1.2 (A:15-208) Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase (MurB), N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=36.79 E-value=8.7 Score=14.17 Aligned_cols=62 Identities=13% Similarity=0.250 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCC----CCCCCCCCCEEEEEEEEE
Q ss_conf 999999999740017189999970543568886279998748947999997352105----866814598899999966
Q gi|254780791|r 19 ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK----IEFLPEEGIEFLVIGKIT 93 (529)
Q Consensus 19 ~l~~~i~~~l~~~~~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~----~~~~~~~G~~v~~~g~~~ 93 (529)
++-..++..+..+ ++...-+++.++...-.| ...++++-.+..- +++.-+++..+.+.|.=|
T Consensus 3 ~~~~~l~~~l~~~--~i~~~~~L~~~tt~~vGG-----------~a~~~v~p~s~~el~~~~~~a~~~~ip~~v~G~GS 68 (194)
T d1hska1 3 DIYQALQQLIPNE--KIKVDEPLKRYTYTKTGG-----------NADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGS 68 (194)
T ss_dssp HHHHHHHHHSCGG--GEEEEEEGGGTCTTSCCC-----------EEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCS
T ss_pred HHHHHHHHHCCCC--CEEECCCCHHCCEEEECE-----------EEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 8999998666836--378278403432711282-----------98899951999999999987564365367860554
No 119
>d1cjya2 c.19.1.2 (A:142-721) Cytosolic phospholipase A2 catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.57 E-value=4.8 Score=16.50 Aligned_cols=30 Identities=17% Similarity=0.300 Sum_probs=21.7
Q ss_pred HHCCCEEEEEECCCCCCHHHHHHHCCCCCCC
Q ss_conf 7489048852057775258988641237772
Q gi|254780791|r 237 ANSSIPIISAIGHETDWTLADYAADLRAPTP 267 (529)
Q Consensus 237 ~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TP 267 (529)
.+.|.||++|+|+..+.++.++-. .=--||
T Consensus 181 g~~P~PI~~a~~~~p~~~~~~~~~-~fEftP 210 (580)
T d1cjya2 181 AQCPLPLFTCLHVKPDVSELMFAD-WVEFSP 210 (580)
T ss_dssp SCSCEEEEEEEECCSSCCCGGGSE-EEEECS
T ss_pred CCCCCCEEEECCCCCCCCCCCCCE-EEEECC
T ss_conf 899887788705578875125534-999736
No 120
>d1s3aa1 c.47.1.22 (A:15-99) NADH-ubiquinone oxidoreductase b8 subunit, CI-B8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.56 E-value=8.8 Score=14.14 Aligned_cols=28 Identities=25% Similarity=0.470 Sum_probs=19.8
Q ss_pred ECCCHHHHHHHHHH----HHHCCC-EEEEEEEC
Q ss_conf 47842589999998----630597-58999721
Q gi|254780791|r 152 TSPTGAVIRDILQR----ISCRFP-LRVIIFPV 179 (529)
Q Consensus 152 ts~~~a~~~D~~~~----~~~r~p-~~~~~~p~ 179 (529)
+|++++|++||+.. ++..+| +.|++.+.
T Consensus 12 ~~~sS~G~R~Fi~~~l~~~~~~NP~v~i~v~~~ 44 (85)
T d1s3aa1 12 RSPGSQGVRDFIEKRYVELKKANPDLPILIREC 44 (85)
T ss_dssp SSCCCHHHHHHHHHTHHHHHHHSTTCCEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 899768799999986799999889952999985
No 121
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=36.55 E-value=8.8 Score=14.14 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=52.0
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 99997654012261001631026528999847842589999998630597589997210011110367999999997410
Q gi|254780791|r 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLK 201 (529)
Q Consensus 122 ~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~ 201 (529)
.+-++|.++|.- | ++++.+.....+....+.+.++.++..|++=|--++....+++. +...
T Consensus 20 aia~~la~~Ga~--------------V-~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~---~~~~- 80 (251)
T d1vl8a_ 20 GIAQGLAEAGCS--------------V-VVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA---VKEK- 80 (251)
T ss_dssp HHHHHHHHTTCE--------------E-EEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH---HHHH-
T ss_pred HHHHHHHHCCCE--------------E-EEEECCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH---HHHH-
T ss_conf 999999987998--------------9-99979889999999999997099479998368999999999999---9997-
Q ss_pred CCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHH
Q ss_conf 0357677758999516888444220076999999
Q gi|254780791|r 202 EGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 (529)
Q Consensus 202 ~~~~~~~~D~iii~RGGGS~eDL~~FN~e~lara 235 (529)
...+|++|-.=|.+...+++-+++|..-+.
T Consensus 81 ----~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~ 110 (251)
T d1vl8a_ 81 ----FGKLDTVVNAAGINRRHPAEEFPLDEFRQV 110 (251)
T ss_dssp ----HSCCCEEEECCCCCCCCCGGGCCHHHHHHH
T ss_pred ----CCCCCEEEECCCCCCCCCHHHCCHHHHHHH
T ss_conf ----399989998999899998255999998777
No 122
>d2hzba1 c.143.1.1 (A:2-312) Hypothetical protein BH3568 {Bacillus halodurans [TaxId: 86665]}
Probab=36.34 E-value=8.8 Score=14.11 Aligned_cols=108 Identities=18% Similarity=0.094 Sum_probs=63.7
Q ss_pred CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC
Q ss_conf 1631026528999847842589999998630597-589997210011110367999999997410035767775899951
Q gi|254780791|r 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILAR 216 (529)
Q Consensus 138 k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~R 216 (529)
=.|...-|-+..+.|....-..+.. .+-..+.+ ..+.+.+. ...|..+.++||+. .|+||++=
T Consensus 121 VlP~t~~~v~l~~~~~dG~~~~ge~-~i~~~~~~~~~~~~~~~---~~~~~~~~~~aI~~------------AD~IiigP 184 (311)
T d2hzba1 121 VLPASNRSIILHGEMEDGTIVTGES-SIPKAGKKIKRVFLTPK---DTKPLREGLEAIRK------------ADVIVIGP 184 (311)
T ss_dssp EEESCSSCCEEEEEETTSCEEESTT-TSGGGCSCEEEEEEEST---TCCCCHHHHHHHHH------------CSEEEECS
T ss_pred EEECCCCCEEEEEEECCCCCCCCCC-HHHHCCCCCEEEECCCC---CCCCCHHHHHHHHH------------CCCEEECC
T ss_conf 9956898558999988997026830-33325776357642567---77677468999983------------89389858
Q ss_pred CCCCHHHHHHCCHHHHHHHHHHCCCEEE--EEEC----CCCCCHHHHHHHC
Q ss_conf 6888444220076999999974890488--5205----7775258988641
Q gi|254780791|r 217 GGGSIEDLWHFNDEMIVRAIANSSIPII--SAIG----HETDWTLADYAAD 261 (529)
Q Consensus 217 GGGS~eDL~~FN~e~laraI~~~~iPVi--sgIG----HE~D~Tl~D~VAD 261 (529)
|-==..=+-.+.=..+..||.+++-|+| +-|+ --..+++.|+|.-
T Consensus 185 gs~~tSI~P~L~v~gi~~AI~~s~a~~v~V~ni~~~~gET~g~~~~d~v~~ 235 (311)
T d2hzba1 185 GSLYTSVLPNLLVPGICEAIKQSTARKVYICNVMTQNGETDGYTASDHLQA 235 (311)
T ss_dssp SCCCCCCHHHHTSTTHHHHHHHCCSEEEEECCSBCCTTTSTTCCHHHHHHH
T ss_pred CCHHHHHHHHEECHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHH
T ss_conf 727877612600287999986289977999657887601247677999999
No 123
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=36.13 E-value=8.9 Score=14.09 Aligned_cols=67 Identities=18% Similarity=0.313 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEC---CCCCHHHHHHCCHHHHHHHHHHCCCEEEEEEC-CCCCCHHHHH
Q ss_conf 0367999999997410035767775899951---68884442200769999999748904885205-7775258988
Q gi|254780791|r 186 CPKEIANAILQLNTLKEGRTCPRPDIIILAR---GGGSIEDLWHFNDEMIVRAIANSSIPIISAIG-HETDWTLADY 258 (529)
Q Consensus 186 a~~~i~~ai~~~~~~~~~~~~~~~D~iii~R---GGGS~eDL~~FN~e~laraI~~~~iPVisgIG-HE~D~Tl~D~ 258 (529)
+...+-++|+.+++.. .++|.||++= .-|+.+....|. +.+.+.....++||+.-.| |+.......+
T Consensus 28 ~~~~l~~~i~~i~~~~-----~~pD~vl~~GDl~~~g~~~~~~~~~-~~l~~~~~~~~~p~~~v~GNHD~~~~~~~~ 98 (256)
T d2hy1a1 28 ADDRLGELLEQLNQSG-----LRPDAIVFTGDLADKGEPAAYRKLR-GLVEPFAAQLGAELVWVMGNHDDRAELRKF 98 (256)
T ss_dssp HHHHHHHHHHHHHHHT-----CCCSEEEECSCCBSSCCHHHHHHHH-HHHHHHHHHHTCEEEECCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHCC-----CCCCEEEECCCCCCCCCHHHHHHHH-HHHHHHHHHCCCCEEEECCCCCCHHHHHHH
T ss_conf 8999999999998438-----9999999899888888715789999-986434540599789976632225666542
No 124
>d2uubb1 c.23.15.1 (B:7-240) Ribosomal protein S2 {Thermus thermophilus [TaxId: 274]}
Probab=36.12 E-value=8.9 Score=14.08 Aligned_cols=64 Identities=25% Similarity=0.408 Sum_probs=45.6
Q ss_pred CCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf 77589995168884442200769999999748904885205777525898864123777214567633234677766999
Q gi|254780791|r 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 (529)
Q Consensus 208 ~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPTaAAElavp~~~EL~~~L~~ 287 (529)
.||+|+|+ | +-.|...++.-..+.||||+=+--..|.+.+||. +|..++-...+.-
T Consensus 152 ~Pd~viv~-------d--~~~~~~Ai~Ea~~l~IPvIaivDTn~dp~~vdyp---------------IP~NDds~~sI~l 207 (234)
T d2uubb1 152 LPDAIFVV-------D--PTKEAIAVREARKLFIPVIALADTDSDPDLVDYI---------------IPGNDDAIRSIQL 207 (234)
T ss_dssp CCSEEEES-------C--TTTTHHHHHHHHHHTCCEEEEECTTSCGGGCSEE---------------EESCSSCHHHHHH
T ss_pred CCEEEEEE-------C--CCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCEE---------------EECCCCHHHHHHH
T ss_conf 33168870-------5--7742889998886098778996337896678678---------------7788865999999
Q ss_pred HHHHHHHH
Q ss_conf 99888778
Q gi|254780791|r 288 LEARLNNI 295 (529)
Q Consensus 288 l~~RL~~a 295 (529)
...-+..+
T Consensus 208 i~~~l~~a 215 (234)
T d2uubb1 208 ILSRAVDL 215 (234)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
T ss_conf 99999999
No 125
>d1n57a_ c.23.16.2 (A:) HSP31 (HchA; YedU) {Escherichia coli [TaxId: 562]}
Probab=35.49 E-value=9.1 Score=14.01 Aligned_cols=68 Identities=15% Similarity=0.083 Sum_probs=42.5
Q ss_pred CCCCEEEEECCCCCHHHHHHCCH--HHHHHHHHHCCCEEEEEECCCCCCHHH--H---HHHCCCCCCCHHHHHHHCC
Q ss_conf 77758999516888444220076--999999974890488520577752589--8---8641237772145676332
Q gi|254780791|r 207 PRPDIIILARGGGSIEDLWHFND--EMIVRAIANSSIPIISAIGHETDWTLA--D---YAADLRAPTPTGAAEMAVP 276 (529)
Q Consensus 207 ~~~D~iii~RGGGS~eDL~~FN~--e~laraI~~~~iPVisgIGHE~D~Tl~--D---~VAD~Ra~TPTaAAElavp 276 (529)
..||+|+|.=|-|...||. .|. -.+++..++..-| |.+|.|-.=.-+. | .+...+.-.-|.+-|..++
T Consensus 140 ~dYdav~iPGGhG~~~dL~-~~~~l~~ll~~~~~~gk~-vaaICHGPa~Ll~a~~g~~l~~Gk~vT~f~~~eE~~~~ 214 (279)
T d1n57a_ 140 SEYAAIFVPGGHGALIGLP-ESQDVAAALQWAIKNDRF-VISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTP 214 (279)
T ss_dssp CSEEEEEECCSGGGGSSGG-GCHHHHHHHHHHHHTTCE-EEEETTGGGGGGGGTTSCCTTTTCEECCCCGGGGGTTT
T ss_pred CCCCEEEECCCCCCHHHHH-HHHHHHHHHHHHHHCCCC-CEECCCCCHHHHHCCCCCCCCCCEEEEECCCHHHHCCC
T ss_conf 1252899558864033416-788999999999973995-03011110011120367754488179636988983000
No 126
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=35.13 E-value=9.2 Score=13.96 Aligned_cols=131 Identities=17% Similarity=0.146 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEC-CC--HHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
Q ss_conf 9999999997654012261001631026528999847-84--25899999986305975899972100111103679999
Q gi|254780791|r 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITS-PT--GAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193 (529)
Q Consensus 117 ~~~~e~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits-~~--~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~a 193 (529)
...||.++.++.+ |.....++ | ||-+-|- .+ ..+...|-+.+.+ .+++|+.-+. ...+.+++++
T Consensus 17 ~~~~e~lr~~~~~---~~~~~gr~----p-kVlla~~g~D~Hd~G~~~va~~l~~-~G~eVi~lg~----~~~~e~iv~a 83 (168)
T d7reqa2 17 TPEVEEARELVEE---FEQAEGRR----P-RILLAKMGQDGHDRGQKVIATAYAD-LGFDVDVGPL----FQTPEETARQ 83 (168)
T ss_dssp CHHHHHHHHHHHH---HHHHHSSC----C-EEEEECBTTCCCCHHHHHHHHHHHH-TTCEEEECCT----TBCHHHHHHH
T ss_pred CHHHHHHHHHHHH---HHHHHCCC----C-EEEEEECCCCHHHHHHHHHHHHHHH-CCCCEECCCC----CCCHHHHHHH
T ss_conf 8789999999999---99860899----8-6999957861778999999999986-7851420787----6768999999
Q ss_pred HHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHH---CCCEEEEE-ECCCCCCH-HHHHHHCCCCCCCH
Q ss_conf 999974100357677758999516888444220076999999974---89048852-05777525-89886412377721
Q gi|254780791|r 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN---SSIPIISA-IGHETDWT-LADYAADLRAPTPT 268 (529)
Q Consensus 194 i~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~---~~iPVisg-IGHE~D~T-l~D~VAD~Ra~TPT 268 (529)
...- ++|+|.|.---|+-..++ ..+++.+-+ .++||+.| +==+.|+. +-..=.|-=+++=|
T Consensus 84 a~~~----------~advI~iSs~~~~~~~~~----~~l~~~L~~~g~~~v~VivGG~ip~~d~~~l~~~Gv~~iF~pgt 149 (168)
T d7reqa2 84 AVEA----------DVHVVGVSSLAGGHLTLV----PALRKELDKLGRPDILITVGGVIPEQDFDELRKDGAVEIYTPGT 149 (168)
T ss_dssp HHHH----------TCSEEEEEECSSCHHHHH----HHHHHHHHHTTCTTSEEEEEESCCGGGHHHHHHHTEEEEECTTC
T ss_pred HHCC----------CCCEEEEECCCCCCHHHH----HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 9715----------998899955765336799----99999998569997189983898989999999689787979689
Q ss_pred HHHHHH
Q ss_conf 456763
Q gi|254780791|r 269 GAAEMA 274 (529)
Q Consensus 269 aAAEla 274 (529)
...|.+
T Consensus 150 ~~~e~a 155 (168)
T d7reqa2 150 VIPESA 155 (168)
T ss_dssp CHHHHH
T ss_pred CHHHHH
T ss_conf 879999
No 127
>d2dria_ c.93.1.1 (A:) D-ribose-binding protein {Escherichia coli, strain k-12 [TaxId: 562]}
Probab=34.38 E-value=9.4 Score=13.87 Aligned_cols=29 Identities=7% Similarity=0.224 Sum_probs=14.0
Q ss_pred EEEEEEECCCC-CC----CCCCCCCCCEEEEEEE
Q ss_conf 79999973521-05----8668145988999999
Q gi|254780791|r 63 RIDAIIWKGTL-NK----IEFLPEEGIEFLVIGK 91 (529)
Q Consensus 63 ~i~~~~~~~~~-~~----~~~~~~~G~~v~~~g~ 91 (529)
.+.++++.... .. +..-.+.|..|++.++
T Consensus 57 ~~d~ii~~~~~~~~~~~~~~~~~~~~ipvV~~~~ 90 (271)
T d2dria_ 57 GTKILLINPTDSDAVGNAVKMANQANIPVITLDR 90 (271)
T ss_dssp TEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECC
T ss_conf 8763112122232147899997514215898436
No 128
>d2vqei1 d.14.1.1 (I:2-128) Ribosomal protein S9 {Thermus thermophilus [TaxId: 274]}
Probab=33.94 E-value=9.5 Score=13.82 Aligned_cols=44 Identities=25% Similarity=0.286 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHC
Q ss_conf 799999999741003576777589995168884442200769999999748
Q gi|254780791|r 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 (529)
Q Consensus 189 ~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~ 239 (529)
.+..-+...+.. ..||+.|-++|||-..---+ =--.++||+...
T Consensus 44 ~~~~Pl~~~~~~------~~~Di~~~V~GGG~~gQa~A-ir~aIaRaL~~~ 87 (127)
T d2vqei1 44 AALEPLRAVDAL------GRFDAYITVRGGGKSGQIDA-IKLGIARALVQY 87 (127)
T ss_dssp GGGHHHHHHTCS------TTEEEEEEEESSCHHHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHCCC------CCEEEEEEEECCCHHHHHHH-HHHHHHHHHHHH
T ss_conf 997554421336------63368998725970678889-999999999997
No 129
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=33.72 E-value=9.6 Score=13.79 Aligned_cols=94 Identities=15% Similarity=0.219 Sum_probs=42.9
Q ss_pred CHHHHHHHH-HHHHHCCCEEEEEEECCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHH
Q ss_conf 425899999-986305975899972100-111103679999999974100357677758999516888444220076999
Q gi|254780791|r 155 TGAVIRDIL-QRISCRFPLRVIIFPVKV-QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 (529)
Q Consensus 155 ~~a~~~D~~-~~~~~r~p~~~~~~p~~v-QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~l 232 (529)
+-..+-++. .++..--...+++|..+. -|-.-..+.+..|... +.++-|-=.+| |++.|.+ +
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~ii~y~~P~~~g~~l~~~~l~~L~~~-----------pnvvgiK~~~~---~~~~~~~--~ 175 (295)
T d1hl2a_ 112 SFEEHCDHYRAIIDSADGLPMVVYNIPARSGVKLTLDQINTLVTL-----------PGVGALKQTSG---DLYQMEQ--I 175 (295)
T ss_dssp CHHHHHHHHHHHHHHHTTSCEEEEECHHHHCCCCCHHHHHHHHTS-----------TTEEEEEECCC---CHHHHHH--H
T ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----------CCHHHHCCCCC---CHHHHHH--H
T ss_conf 737799999987504676752111221124666432100012457-----------40321024544---4887777--7
Q ss_pred HHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCCHH
Q ss_conf 9999748904885205777525898864123777214
Q gi|254780791|r 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 (529)
Q Consensus 233 araI~~~~iPVisgIGHE~D~Tl~D~VAD~Ra~TPTa 269 (529)
+. ....+-|++|-++ .-+..+..-...-.++.
T Consensus 176 -~~-~~~~~~v~~g~~~---~~~~~~~~G~~G~is~~ 207 (295)
T d1hl2a_ 176 -RR-EHPDLVLYNGYDE---IFASGLLAGADGGIGST 207 (295)
T ss_dssp -HH-HCTTCEEEECCGG---GHHHHHHHTCCEEEETT
T ss_pred -HH-CCCCCEEECCCHH---HHHHHHCCCCCCEECCC
T ss_conf -60-4887157236378---77555305977312220
No 130
>d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=33.63 E-value=9.6 Score=13.78 Aligned_cols=20 Identities=25% Similarity=0.394 Sum_probs=13.8
Q ss_pred HHHHHHCCCEEEEEEC-CCCCC
Q ss_conf 9999748904885205-77752
Q gi|254780791|r 233 VRAIANSSIPIISAIG-HETDW 253 (529)
Q Consensus 233 araI~~~~iPVisgIG-HE~D~ 253 (529)
...+. +.+|++..+| ||.|.
T Consensus 66 ~~~~~-~~~P~~~~~GNHD~~~ 86 (312)
T d2qfra2 66 TERSV-AYQPWIWTAGNHEIEF 86 (312)
T ss_dssp HHHHH-TTSCEEECCCGGGTCC
T ss_pred HHHHH-HCCEEEEECCCCCCCC
T ss_conf 88876-4464898325100255
No 131
>d2p10a1 c.1.12.9 (A:8-204) Uncharacterized protein Mll9387 {Mesorhizobium loti [TaxId: 381]}
Probab=33.62 E-value=9.6 Score=13.78 Aligned_cols=52 Identities=17% Similarity=0.376 Sum_probs=33.9
Q ss_pred CCCEEEE-------ECCCCCHHHHHHCCH-----HHHHHHHHH--CCCEEEEEEC-----CCCCCHHHHHH
Q ss_conf 7758999-------516888444220076-----999999974--8904885205-----77752589886
Q gi|254780791|r 208 RPDIIIL-------ARGGGSIEDLWHFND-----EMIVRAIAN--SSIPIISAIG-----HETDWTLADYA 259 (529)
Q Consensus 208 ~~D~iii-------~RGGGS~eDL~~FN~-----e~laraI~~--~~iPVisgIG-----HE~D~Tl~D~V 259 (529)
.||+|.+ ..|+.+..-++.|.| .+.++.|.+ +.+|||..+. .....|+-.|.
T Consensus 40 Gfdai~~~~~g~~~s~g~~~~~g~l~~~d~~~~~~~~a~~i~~~v~~iPviaD~dG~g~~~nv~rtv~~~~ 110 (197)
T d2p10a1 40 DIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELK 110 (197)
T ss_dssp TCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHH
T ss_pred CCCEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHH
T ss_conf 99899983379999717851103467207799999999999975136866870278985066999999999
No 132
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]}
Probab=33.55 E-value=9.7 Score=13.77 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=21.4
Q ss_pred CCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 7758999516888444220076999999974890488520577
Q gi|254780791|r 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 (529)
Q Consensus 208 ~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE 250 (529)
.++.|.++ ||||..|+|+ .+.-.|.. .||..--.+|
T Consensus 147 ~~~~i~~~-GG~s~s~~~~----Qi~Advlg--~~v~~~~~~e 182 (235)
T d1r59o2 147 DIPLLKVD-GGAAKNDLLM----QFQADILD--IDVQRAANLE 182 (235)
T ss_dssp CCSEEEEE-ESTTSCHHHH----HHHHHHHS--SEEEEESCCC
T ss_pred CCCEEEEC-CCCHHCHHHH----HHHHHCCC--EEEEECCCCC
T ss_conf 97279963-7620288997----22122210--2333213411
No 133
>d2ffea1 c.143.1.1 (A:1-309) LPPG:FO 2-phospho-L-lactate transferase CofD {Methanosarcina mazei [TaxId: 2209]}
Probab=33.37 E-value=9.7 Score=13.74 Aligned_cols=114 Identities=9% Similarity=-0.044 Sum_probs=65.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHH
Q ss_conf 07999999999976540122610016310265289998478425899999986305975899972100111103679999
Q gi|254780791|r 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193 (529)
Q Consensus 114 G~l~~~~e~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~a 193 (529)
|++....+++.+.|.-.| +=.|.-.-|-++.+.+....-..+...-..+..-+....+|.-. .-..+.++.++|
T Consensus 107 ~~l~~ai~~~~~~l~i~g-----~VlP~t~~~v~l~a~~~dG~~~~ge~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~a 180 (309)
T d2ffea1 107 ASLTDSTVKLSSLFGIKA-----NILPMSDDPVSTYIETAEGIMHFQDFWIGKRGEPDVRGVDIRGV-SEASISPKVLEA 180 (309)
T ss_dssp CCHHHHHHHHHHHHTCCS-----EEEESBSSCCEEEEEETTEEEEHHHHTTTTTTCSCCSEEEEETT-TTCCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCC-----EEECCCCCCEEEEEEECCCCEEECCEEEEECCCCCEEEEEECCC-CCCCCCHHHHHH
T ss_conf 999999999999868994-----69825588637999968998870657997246786588862378-776579999999
Q ss_pred HHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 9999741003576777589995168884442200769999999748904885
Q gi|254780791|r 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 194 i~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
|+. .|+||++=|-==..=+-.+-=..+..||.+++.|.|+
T Consensus 181 I~~------------AD~Iv~gPGs~ytSI~P~Llv~gi~~ai~~~~~~~v~ 220 (309)
T d2ffea1 181 FEK------------EENILIGPSNPITSIGPIISLPGMRELLKKKKVVAVS 220 (309)
T ss_dssp HHH------------CCEEEECSSCTTTTHHHHHHSTTHHHHHTTSEEEEEC
T ss_pred HHH------------CCCEEECCCCCHHHHCCCCCCHHHHHHHHCCCEEEEE
T ss_conf 985------------9958983896166506401356799997429817990
No 134
>d1jfla1 c.78.2.1 (A:1-115) Aspartate racemase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=33.36 E-value=9.7 Score=13.74 Aligned_cols=83 Identities=25% Similarity=0.394 Sum_probs=53.6
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHC--------CCEEEEEEECC-C---------CCCCHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 289998478425899999986305--------97589997210-0---------11110367999999997410035767
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCR--------FPLRVIIFPVK-V---------QGDECPKEIANAILQLNTLKEGRTCP 207 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r--------~p~~~~~~p~~-v---------QG~~a~~~i~~ai~~~~~~~~~~~~~ 207 (529)
|+||||..-+-++=-|+.+.+.+. +| .++++..+ + +++.....+.+.++.+....
T Consensus 2 k~IGIIGGmgp~at~~yy~~i~~~~~~~~d~~~~-~~il~s~~~~~~r~~~~~~~~~~~~~~l~~~~~~Le~~G------ 74 (115)
T d1jfla1 2 KTIGILGGMGPLATAELFRRIVIKTPAKRDQEHP-KVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECG------ 74 (115)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHTCCCSSGGGSC-CEEEEECTTSCCHHHHHTTSSCCCHHHHHHHHHHHHHHT------
T ss_pred CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC-HHHEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC------
T ss_conf 7888846719899999999999998876489788-125033687878999975242204799999999999669------
Q ss_pred CCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 77589995168884442200769999999748904885
Q gi|254780791|r 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 208 ~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
.|+|+|+==-. =++|++ |. ..+++|+|+
T Consensus 75 -a~~i~i~cNT~----H~~~d~--i~---~~~~iP~l~ 102 (115)
T d1jfla1 75 -ADFIIMPCNTA----HAFVED--IR---KAIKIPIIS 102 (115)
T ss_dssp -CSEEECSCTGG----GGGHHH--HH---HHCSSCBCC
T ss_pred -CCEEEECCCHH----HHHHHH--HH---HHCCCCEEC
T ss_conf -99999767589----999999--99---877998864
No 135
>d1miob_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Clostridium pasteurianum [TaxId: 1501]}
Probab=33.35 E-value=9.7 Score=13.74 Aligned_cols=92 Identities=23% Similarity=0.216 Sum_probs=52.5
Q ss_pred CCEEEEEECCCHHHHHHH----HHHHHHCCC----EEEEEEECC-CCCCCH--HHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 528999847842589999----998630597----589997210-011110--367999999997410035767775899
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDI----LQRISCRFP----LRVIIFPVK-VQGDEC--PKEIANAILQLNTLKEGRTCPRPDIII 213 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~----~~~~~~r~p----~~~~~~p~~-vQG~~a--~~~i~~ai~~~~~~~~~~~~~~~D~ii 213 (529)
|+-|+|+|+..++.++|= ++.+.++.+ ..|+.++++ ..|... ......+|- ..+.+........+-|
T Consensus 96 P~~I~v~~tC~~~iIGdDi~~v~~~~~~~~~~p~~~~vi~v~t~gf~g~~~~g~~~a~~~l~--~~~~~~~~~~~~~vNi 173 (457)
T d1miob_ 96 PDIIAVHTTCLSETLGDDLPTYISQMEDAGSIPEGKLVIHTNTPSYVGSHVTGFANMVQGIV--NYLSENTGAKNGKINV 173 (457)
T ss_dssp CSEEEEEECHHHHHHTCCHHHHHHHHHHTTCSCTTCEEEEECCCTTSSCHHHHHHHHHHHHH--HHHCCCCSCCCSCEEE
T ss_pred CCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH--HHHCCCCCCCCCCCCC
T ss_conf 97899964774521588888999999984599988608997478657750499999999999--8734566777776100
Q ss_pred EECCCCCHHHHHHCCHHHHHHHHHHCCCEEE
Q ss_conf 9516888444220076999999974890488
Q gi|254780791|r 214 LARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 (529)
Q Consensus 214 i~RGGGS~eDL~~FN~e~laraI~~~~iPVi 244 (529)
|+ + -.|.-|.+++-+-+..+-++++
T Consensus 174 ig---~---~~~~~d~~ei~~ll~~~Gl~~~ 198 (457)
T d1miob_ 174 IP---G---FVGPADMREIKRLFEAMDIPYI 198 (457)
T ss_dssp EC---C---SCCHHHHHHHHHHHHHHTCCEE
T ss_pred CC---C---CCCCCCHHHHHHHHHHCCCCEE
T ss_conf 57---8---9981339999999998599656
No 136
>d1uuya_ c.57.1.1 (A:) Plant CNX1 G domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=33.24 E-value=9.8 Score=13.73 Aligned_cols=66 Identities=18% Similarity=0.255 Sum_probs=39.3
Q ss_pred CEEEEEEC-----------CCHHHHHHHHHHHHHC-CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 28999847-----------8425899999986305-97589997210011110367999999997410035767775899
Q gi|254780791|r 146 KIIAVITS-----------PTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 (529)
Q Consensus 146 ~~i~vits-----------~~~a~~~D~~~~~~~r-~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii 213 (529)
-||||||- .+|..+...+.....+ +++++.-|.+. .++ +..|.++|..+-... .+|+||
T Consensus 4 ~rvaIitvsD~~~~G~~~D~~G~~l~~~l~~~~~~~~G~~v~~~~iv--pDd-~~~I~~~l~~~~~~~------~~D~Ii 74 (161)
T d1uuya_ 4 YKVAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVV--PDE-VERIKDILQKWSDVD------EMDLIL 74 (161)
T ss_dssp EEEEEEEECHHHHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEE--CSC-HHHHHHHHHHHHHTS------CCSEEE
T ss_pred CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEE--CCC-HHHHHHHHHHHHHCC------CCEEEE
T ss_conf 29999997777888984788658999999851444589579999997--798-999999999865467------762899
Q ss_pred EECCCCCH
Q ss_conf 95168884
Q gi|254780791|r 214 LARGGGSI 221 (529)
Q Consensus 214 i~RGGGS~ 221 (529)
..= |=|.
T Consensus 75 ttG-Gtg~ 81 (161)
T d1uuya_ 75 TLG-GTGF 81 (161)
T ss_dssp EES-CCSS
T ss_pred EEC-CCCC
T ss_conf 845-8778
No 137
>d1ylqa1 d.218.1.5 (A:1-90) Putative nucleotidyltransferase AF0614 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.96 E-value=9.8 Score=13.69 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=30.7
Q ss_pred HHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
Q ss_conf 9999998630597-589997210011110367999999997410035767775899951688
Q gi|254780791|r 159 IRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 (529)
Q Consensus 159 ~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGG 219 (529)
++.|..++++.+| .+|+||.+.+-|+-.+. ...+|++||...-.
T Consensus 1 l~~i~e~ik~~~~~~kViLFGS~ArG~~~~~-----------------~SDiDllVV~~~~~ 45 (90)
T d1ylqa1 1 MKEIKEITKKDVQDAEIYLYGSVVEGDYSIG-----------------LSDIDVAIVSDVFE 45 (90)
T ss_dssp HHHHHHHHHHHCTTCEEEEESHHHHCCSSSC-----------------CCSEEEEEECGGGG
T ss_pred CHHHHHHHHHHCCCCEEEEECCCCCCCCCCC-----------------CCCCEEEEEECCCC
T ss_conf 9789999998789958999876203898788-----------------88657999967888
No 138
>d2oq0a1 b.40.16.1 (A:115-202) Gamma-interferon-inducible protein Ifi-16 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.86 E-value=9.9 Score=13.68 Aligned_cols=37 Identities=19% Similarity=0.374 Sum_probs=27.8
Q ss_pred CCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEE
Q ss_conf 8627999874894799999735210586681459889999
Q gi|254780791|r 50 SGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89 (529)
Q Consensus 50 sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~ 89 (529)
.-+.||+++|+.++|..+.. +++.++ .=++||++-+.
T Consensus 28 ~~~~~YeI~D~TG~MeVvv~-G~~~ni--~CeeGDKLrL~ 64 (88)
T d2oq0a1 28 QKTTIYEIQDDRGKMDVVGT-GQCHNI--PCEEGDKLQLF 64 (88)
T ss_dssp SSEEEEEEEETTEEEEEEEE-GGGSSC--CCCTTCEEEEE
T ss_pred CCEEEEEEECCCCCEEEEEE-CCEEEC--CCCCCCEEEEE
T ss_conf 77499998648873999996-618010--35899858999
No 139
>d2a21a1 c.1.10.4 (A:1002-1264) 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) {Aquifex aeolicus [TaxId: 63363]}
Probab=32.80 E-value=9.9 Score=13.67 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf 1036799999999741003576777589995168884442200769999999748904885205777525
Q gi|254780791|r 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 (529)
Q Consensus 185 ~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~T 254 (529)
.++.+...|++++.... ..+++..-||- +..---...+..-.+ ....--|++--..|....-
T Consensus 128 ~~~~~~~~a~e~~~~~G------~~~v~~~eRg~-~~g~~~~~~~~r~~~-~~~~~~~~~~d~~~s~~~~ 189 (263)
T d2a21a1 128 LAPWDTKNVVEKLKFGG------AKEIYLTERGT-TFGYNNLVVDFRSLP-IMKQWAKVIYDATHSVQLP 189 (263)
T ss_dssp CCGGGGHHHHHHHHHTT------CSSEEEEECCE-ECSTTCEECCTTHHH-HHTTTSEEEEETTGGGEET
T ss_pred CCHHHHHHHHHHHHHCC------CCEEEEECCCE-ECCCCCCCCCCCCCC-CCCCCCCCHHHHHHCCCCC
T ss_conf 73666532467898589------76687522430-036430123444300-0234442111243355578
No 140
>d1kz1a_ c.16.1.1 (A:) Lumazine synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=32.59 E-value=10 Score=13.65 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=52.9
Q ss_pred CCEEEEEECCCHHHHHH-----HHHHHHHC--CC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE---
Q ss_conf 52899984784258999-----99986305--97-589997210011110367999999997410035767775899---
Q gi|254780791|r 145 PKIIAVITSPTGAVIRD-----ILQRISCR--FP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII--- 213 (529)
Q Consensus 145 p~~i~vits~~~a~~~D-----~~~~~~~r--~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii--- 213 (529)
-.||+||.|.=-.-+-| ....+.+. .+ .++.++.++ |. -||--+++.+-..+ +||.+|
T Consensus 9 ~~rI~IV~s~~n~~i~~~L~~ga~~~l~~~~~~~~~~i~v~~VP--Ga---~EiP~~~~~~~~~~------~~D~iIalG 77 (150)
T d1kz1a_ 9 ELRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVP--GS---WELPQGIRASIARN------TYDAVIGIG 77 (150)
T ss_dssp TCCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECS--SG---GGHHHHHHHHHHHS------CCSEEEEEE
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC--CH---HHHHHHHHHHHHCC------CCCEEEEEE
T ss_conf 98899997418789999999999999998569984342799957--77---77899999987324------656178887
Q ss_pred -EECCCCCHHHHHHCCHHHHHHHHH----HCCCEEEEEEC
Q ss_conf -951688844422007699999997----48904885205
Q gi|254780791|r 214 -LARGGGSIEDLWHFNDEMIVRAIA----NSSIPIISAIG 248 (529)
Q Consensus 214 -i~RGGGS~eDL~~FN~e~laraI~----~~~iPVisgIG 248 (529)
|+||+=.--|+.+ ..+++.|. ...+||+.||=
T Consensus 78 ~VIkGeT~H~e~I~---~~v~~gl~~lsl~~~~PI~~GIL 114 (150)
T d1kz1a_ 78 VLIKGSTMHFEYIS---EAVVHGLMRVGLDSGVPVILGLL 114 (150)
T ss_dssp EEECCSSSHHHHHH---HHHHHHHHHHHHHHCCCEEEEEE
T ss_pred EEECCCCHHHHHHH---HHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 77637625878999---99999999985538963799978
No 141
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=32.26 E-value=10 Score=13.60 Aligned_cols=28 Identities=18% Similarity=0.415 Sum_probs=21.6
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCC-EEE
Q ss_conf 8999847842589999998630597-589
Q gi|254780791|r 147 IIAVITSPTGAVIRDILQRISCRFP-LRV 174 (529)
Q Consensus 147 ~i~vits~~~a~~~D~~~~~~~r~p-~~~ 174 (529)
+|=||++|+|+|-.=+++.|.++|| +..
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~~~~~ 31 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIPNLHF 31 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSTTCEE
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCEE
T ss_conf 49999899999999999999845899717
No 142
>d1w25a1 c.23.1.1 (A:2-140) Response regulator PleD, receiver domain {Caulobacter crescentus [TaxId: 155892]}
Probab=32.09 E-value=10 Score=13.58 Aligned_cols=87 Identities=15% Similarity=0.065 Sum_probs=52.7
Q ss_pred EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf 89998478425899999986305975899972100111103679999999974100357677758999516888444220
Q gi|254780791|r 147 IIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226 (529)
Q Consensus 147 ~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~ 226 (529)
||-|| .+.....++++.+=+++++++.... +--+|+..+... .||+|++- -+|-.
T Consensus 3 rILiV--DD~~~~~~~l~~~L~~~g~~v~~a~----------~~~eal~~~~~~-------~~dlil~D------~~~p~ 57 (139)
T d1w25a1 3 RILVV--DDIEANVRLLEAKLTAEYYEVSTAM----------DGPTALAMAARD-------LPDIILLD------VMMPG 57 (139)
T ss_dssp EEEEE--CSSTTHHHHHHHHHHHTTCEEEEES----------SHHHHHHHHHHH-------CCSEEEEE------SCCSS
T ss_pred EEEEE--ECCHHHHHHHHHHHHHCCCEEEEEC----------CCHHHHHHHHCC-------CCEEEEEE------CCCCC
T ss_conf 89999--8989999999999998799999974----------632545543135-------41022110------12468
Q ss_pred CCHHHHHHHHHH----CCCEEEEEECCCCCCHHHHH
Q ss_conf 076999999974----89048852057775258988
Q gi|254780791|r 227 FNDEMIVRAIAN----SSIPIISAIGHETDWTLADY 258 (529)
Q Consensus 227 FN~e~laraI~~----~~iPVisgIGHE~D~Tl~D~ 258 (529)
.|-..+++.+-. ..+|||.=.||....+....
T Consensus 58 ~~G~~~~~~ir~~~~~~~~piI~lt~~~~~~~~~~a 93 (139)
T d1w25a1 58 MDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQG 93 (139)
T ss_dssp SCHHHHHHHHHHSTTTTTSCEEEEECSSCHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHH
T ss_conf 984288877664132468988999707999999999
No 143
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=31.76 E-value=10 Score=13.54 Aligned_cols=48 Identities=23% Similarity=0.257 Sum_probs=22.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHHHH
Q ss_conf 10011110367999999997410035767775899951688844422007699999997
Q gi|254780791|r 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 (529)
Q Consensus 179 ~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~laraI~ 237 (529)
+.+=+......++++....+ .-+.-++-|-+ .+||-.||-+.+++.+.
T Consensus 164 TKlDe~~~~G~~l~~~~~~~----------~Pi~~i~~Gq~-v~Dl~~~~~~~l~~~ll 211 (213)
T d1vmaa2 164 TKLDGTAKGGITLAIARELG----------IPIKFIGVGEK-AEDLRPFDPEAFVEVLL 211 (213)
T ss_dssp ECGGGCSCTTHHHHHHHHHC----------CCEEEEECSSS-GGGEEECCHHHHHHHHT
T ss_pred ECCCCCCCCCHHHHHHHHHC----------CCEEEEECCCC-CCCCCCCCHHHHHHHHH
T ss_conf 42467876239999999979----------79799968998-00175089999999985
No 144
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}
Probab=31.61 E-value=8.3 Score=14.34 Aligned_cols=13 Identities=31% Similarity=0.598 Sum_probs=8.8
Q ss_pred CCCCEEEEECCCCCH
Q ss_conf 777589995168884
Q gi|254780791|r 207 PRPDIIILARGGGSI 221 (529)
Q Consensus 207 ~~~D~iii~RGGGS~ 221 (529)
.+|||||| |||.-
T Consensus 2 k~YDvvVI--G~GpA 14 (240)
T d1feca1 2 RAYDLVVI--GAGSG 14 (240)
T ss_dssp CSEEEEEE--CCSHH
T ss_pred CCCCEEEE--CCCHH
T ss_conf 75198998--97889
No 145
>d1rvv1_ c.16.1.1 (1:) Lumazine synthase {Bacillus subtilis [TaxId: 1423]}
Probab=31.42 E-value=10 Score=13.50 Aligned_cols=88 Identities=22% Similarity=0.248 Sum_probs=51.6
Q ss_pred CCEEEEEECCCHHHHHHH-----HHHHHHC-CC---EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE--
Q ss_conf 528999847842589999-----9986305-97---589997210011110367999999997410035767775899--
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDI-----LQRISCR-FP---LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII-- 213 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~-----~~~~~~r-~p---~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii-- 213 (529)
..|||||.|.==.-+-|- +..+.+. .. +.++-.|=.+ ||--+++.+-..+ +||.+|
T Consensus 12 ~~ki~IV~s~~n~~I~~~l~~ga~~~l~~~g~~~~~i~v~~VPGa~-------EiP~~~~~~~~~~------~~daiIal 78 (154)
T d1rvv1_ 12 GLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAF-------EIPFAAKKMAETK------KYDAIITL 78 (154)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGG-------GHHHHHHHHHHTS------CCSEEEEE
T ss_pred CCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEE-------EHHHHHHHHHCCC------CCCEEEEE
T ss_conf 9889999801769999999999999999859986675799978453-------1879999875034------65627888
Q ss_pred --EECCCCCHHHHHHCCHHHHHHHHH----HCCCEEEEEEC
Q ss_conf --951688844422007699999997----48904885205
Q gi|254780791|r 214 --LARGGGSIEDLWHFNDEMIVRAIA----NSSIPIISAIG 248 (529)
Q Consensus 214 --i~RGGGS~eDL~~FN~e~laraI~----~~~iPVisgIG 248 (529)
|+||+=.--|+.+ ..+++.|. ...+||+.||=
T Consensus 79 G~VIkGeT~H~e~I~---~~v~~gl~~lsl~~~~PV~~GIL 116 (154)
T d1rvv1_ 79 GTVIRGATTHYDYVC---NEAAKGIAQAANTTGVPVIFGIV 116 (154)
T ss_dssp EEEECCSSSHHHHHH---HHHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEECCCCHHHHHHH---HHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 899717870677899---99999999996327987798625
No 146
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]}
Probab=31.31 E-value=10 Score=13.48 Aligned_cols=68 Identities=21% Similarity=0.350 Sum_probs=36.1
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHH-HHHHHHHCCCEEEEEEC-CCCCCHHHHHH
Q ss_conf 110367999999997410035767775899951688844422007699-99999748904885205-77752589886
Q gi|254780791|r 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM-IVRAIANSSIPIISAIG-HETDWTLADYA 259 (529)
Q Consensus 184 ~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~-laraI~~~~iPVisgIG-HE~D~Tl~D~V 259 (529)
.++...+.++++.++... .++|+||++ |-+-|--.-.++. +.+.+...++||..-.| |+.+....++.
T Consensus 22 ~~~~~~l~~~~~~i~~~~-----~~~D~vv~~---GDl~~~~~~~~y~~~~~~l~~l~~p~~~i~GNHD~~~~~~~~~ 91 (271)
T d3d03a1 22 IDVNAANADVVSQLNALR-----ERPDAVVVS---GDIVNCGRPEEYQVARQILGSLNYPLYLIPGNHDDKALFLEYL 91 (271)
T ss_dssp BCHHHHHHHHHHHHHTCS-----SCCSEEEEE---SCCBSSCCHHHHHHHHHHHTTCSSCEEEECCTTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCC-----CCCCEEEEC---CCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
T ss_conf 689999999999998358-----999999989---5467288422689999987505998999936864267888876
No 147
>d2hq2a1 e.62.1.1 (A:1-337) Heme oxygenase ChuS {Escherichia coli O157:H7 [TaxId: 83334]}
Probab=31.28 E-value=10 Score=13.48 Aligned_cols=82 Identities=12% Similarity=0.128 Sum_probs=52.6
Q ss_pred EEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCC---CCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECC
Q ss_conf 999997054356888627999874894799999735210586---68145988999999667528843799999710168
Q gi|254780791|r 36 CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE---FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 (529)
Q Consensus 36 ~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~---~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~~~g 112 (529)
-++|+.-|++ .+||+.+.|.++. |..-||-+.+...= -....| .+-++.||-..|.-=+.|.--+-+.
T Consensus 74 E~~G~y~~~~---~~g~~~l~l~~~~--IdLRlf~~~w~~~faV~~~~~~g----~~~SlQFFD~~G~AvhKVylt~~Sd 144 (337)
T d2hq2a1 74 EQVGTFTNQH---LNGHAGLILNPRA--LDLRLFLNQWASVFHIKENTARG----ERQSIQFFDHQGDALLKVYATDNTD 144 (337)
T ss_dssp EEEECCCSEE---CSSSSEEECCTTS--CCEEECGGGEEEEEEEEECCTTS----CEEEEEEEETTSCEEEEEECCTTSC
T ss_pred EEEEECCCCC---CCCEEEEEECCCC--EEEEEEHHHCCEEEEEEECCCCC----CEEEEEEECCCCCEEEEEECCCCCC
T ss_conf 8875337831---3780578986874--06998721030899998517898----5364898868783014676068998
Q ss_pred CCHHHHHHHHHHHHHHHH
Q ss_conf 007999999999976540
Q gi|254780791|r 113 SGTLLTALEKRKKKLLEE 130 (529)
Q Consensus 113 ~G~l~~~~e~lk~~L~~e 130 (529)
...|++|..++..+
T Consensus 145 ----~~A~~~Lv~~~~~~ 158 (337)
T d2hq2a1 145 ----MAAWSELLARFITD 158 (337)
T ss_dssp ----HHHHHHHHHHHBCS
T ss_pred ----HHHHHHHHHHHHCC
T ss_conf ----89999999986276
No 148
>d1i6aa_ c.94.1.1 (A:) Hydrogen peroxide-inducible genes LysR-type activator OxyR, regulatory domain {Escherichia coli [TaxId: 562]}
Probab=30.75 E-value=11 Score=13.41 Aligned_cols=91 Identities=18% Similarity=0.224 Sum_probs=54.8
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH
Q ss_conf 528999847842589999998630597-5899972100111103679999999974100357677758999516888444
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eD 223 (529)
.-|||+..|-....+-+++..+.++|| +++.+.. ....++...+... ..|+.++. +.....+
T Consensus 6 ~lrig~~~~~~~~~lp~~l~~f~~~~P~v~l~i~~------~~~~~~~~~l~~~----------~~d~~~~~-~~~~~~~ 68 (212)
T d1i6aa_ 6 PLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHE------AQTHQLLAQLDSG----------KLDAVILA-LVKESEA 68 (212)
T ss_dssp EEEEEECTTTHHHHHHHHHHHHHHHCTTEEEEEEE------CCHHHHHHHHHHT----------SCSEEEEE-CCGGGTT
T ss_pred EEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEE------CCCCCCCCCCCCC----------CHHHHHEE-CCCCCCC
T ss_conf 99998377899999999999999988896899998------8775532223221----------00000000-1112232
Q ss_pred HHHCCHHHHHHHHHHCCCEEEEEECCC----CCCHHHHHH
Q ss_conf 220076999999974890488520577----752589886
Q gi|254780791|r 224 LWHFNDEMIVRAIANSSIPIISAIGHE----TDWTLADYA 259 (529)
Q Consensus 224 L~~FN~e~laraI~~~~iPVisgIGHE----~D~Tl~D~V 259 (529)
+... .++..+.-++..-+|. ...|+.|+.
T Consensus 69 ~~~~-------~l~~~~~~~~~~~~hpla~~~~i~~~dl~ 101 (212)
T d1i6aa_ 69 FIEV-------PLFDEPMLLAIYEDHPWANREAVPMADLA 101 (212)
T ss_dssp SEEE-------EEEEEEEEEEEETTSGGGGCSCEEGGGGT
T ss_pred CCCE-------ECCCCCEEEEEECCCHHHCCCCCCCHHHC
T ss_conf 1201-------11222257875037721159963302201
No 149
>d1dcfa_ c.23.1.2 (A:) Receiver domain of the ethylene receptor {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=30.66 E-value=11 Score=13.40 Aligned_cols=85 Identities=11% Similarity=0.160 Sum_probs=52.1
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHH
Q ss_conf 52899984784258999999863059758999721001111036799999999741003576777589995168884442
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL 224 (529)
+.||-||- +....++++..+=++|++++..... |+ +|++.+.. .||+|++ |+
T Consensus 7 g~rILvVD--D~~~~~~~l~~~L~~~G~~v~~a~~---g~-------eal~~l~~--------~~dlill--------D~ 58 (134)
T d1dcfa_ 7 GLKVLVMD--ENGVSRMVTKGLLVHLGCEVTTVSS---NE-------ECLRVVSH--------EHKVVFM--------DV 58 (134)
T ss_dssp TCEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESS---HH-------HHHHHCCT--------TCSEEEE--------EC
T ss_pred CCEEEEEE--CCHHHHHHHHHHHHHCCCEEEEECC---HH-------HHHHHHHC--------CCCEEEE--------EE
T ss_conf 99999995--9999999999999987999999899---99-------99997643--------9976798--------73
Q ss_pred H--HCCHHHHHHHHHH-------CCCEEEEEECCCCCCHHHH
Q ss_conf 2--0076999999974-------8904885205777525898
Q gi|254780791|r 225 W--HFNDEMIVRAIAN-------SSIPIISAIGHETDWTLAD 257 (529)
Q Consensus 225 ~--~FN~e~laraI~~-------~~iPVisgIGHE~D~Tl~D 257 (529)
. ..|-.++++.|-+ ..+|||.--||..+.+...
T Consensus 59 ~mP~~dG~el~~~ir~~~~~~~~~~~~ii~lT~~~~~~~~~~ 100 (134)
T d1dcfa_ 59 CMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEK 100 (134)
T ss_dssp CSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHH
T ss_conf 368986699999999860002589876999858999999999
No 150
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]}
Probab=30.63 E-value=11 Score=13.40 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEECC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHH
Q ss_conf 842589999998630597589997210-0111103679999999974100357677758999516888444220076999
Q gi|254780791|r 154 PTGAVIRDILQRISCRFPLRVIIFPVK-VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 (529)
Q Consensus 154 ~~~a~~~D~~~~~~~r~p~~~~~~p~~-vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~l 232 (529)
++-.++-++.+.+.+.-++.+.+|..+ .-|..-..+.+..|.. . .+.++.+--+.|..... +.+
T Consensus 110 ~s~~~i~~~~~~ia~a~~~pi~iYn~P~~~g~~~~~~~~~~l~~--~--------~~ni~~iK~~~~~~~~~-----~~~ 174 (295)
T d1o5ka_ 110 PTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAA--D--------LKNVVGIKEANPDIDQI-----DRT 174 (295)
T ss_dssp CCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHH--H--------CTTEEEEEECCCCHHHH-----HHH
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCHHCCCCHHHHHHHHHH--H--------CCCCCCEECCCCCHHHH-----HHH
T ss_conf 89999999999998536997068756311102302689999886--1--------24655323178623334-----467
Q ss_pred HHHHH--HCCCEEEEEEC
Q ss_conf 99997--48904885205
Q gi|254780791|r 233 VRAIA--NSSIPIISAIG 248 (529)
Q Consensus 233 araI~--~~~iPVisgIG 248 (529)
++..- ....-|.+|-+
T Consensus 175 ~~~~~~~~~~~~v~~g~~ 192 (295)
T d1o5ka_ 175 VSLTKQARSDFMVWSGND 192 (295)
T ss_dssp HHHHHHHCTTCEEEESSG
T ss_pred HHHHHHCCCCCEECCCCC
T ss_conf 777640588622304432
No 151
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=30.51 E-value=11 Score=13.38 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=23.3
Q ss_pred CCEEEEECCC-CCHHHHHHCCHHHHHHHHHHCCCEEEEE-E----CCCCCCHHHHHHHCCCC
Q ss_conf 7589995168-8844422007699999997489048852-0----57775258988641237
Q gi|254780791|r 209 PDIIILARGG-GSIEDLWHFNDEMIVRAIANSSIPIISA-I----GHETDWTLADYAADLRA 264 (529)
Q Consensus 209 ~D~iii~RGG-GS~eDL~~FN~e~laraI~~~~iPVisg-I----GHE~D~Tl~D~VAD~Ra 264 (529)
.| ++|++|| |++-++ +.|.+|+|.- + ||+... ++++.+.-+
T Consensus 249 ad-l~It~~G~~T~~Ea------------l~~g~P~I~iP~~~~~~~Q~~N--A~~l~~~G~ 295 (351)
T d1f0ka_ 249 AD-VVVCRSGALTVSEI------------AAAGLPALFVPFQHKDRQQYWN--ALPLEKAGA 295 (351)
T ss_dssp CS-EEEECCCHHHHHHH------------HHHTCCEEECCCCCTTCHHHHH--HHHHHHTTS
T ss_pred CC-HHHCCCCCHHHHHH------------HHHCCCEEEEECCCCCCHHHHH--HHHHHHCCC
T ss_conf 74-22205542377888------------8717854654154677669999--999998899
No 152
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=30.38 E-value=11 Score=13.36 Aligned_cols=84 Identities=15% Similarity=0.166 Sum_probs=48.5
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHH
Q ss_conf 28999847842589999998630597589997210011110367999999997410035767775899951688844422
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~ 225 (529)
+||-||- +-..+++++..+=..+++++..... -.+|++.+... .||+|++ |+.
T Consensus 2 krILvVD--D~~~~~~~l~~~L~~~g~~v~~a~~----------g~eal~~~~~~-------~~dlill--------D~~ 54 (119)
T d1peya_ 2 EKILIVD--DQSGIRILLNEVFNKEGYQTFQAAN----------GLQALDIVTKE-------RPDLVLL--------DMK 54 (119)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEESS----------HHHHHHHHHHH-------CCSEEEE--------ESC
T ss_pred CEEEEEE--CCHHHHHHHHHHHHHCCCEEEEECC----------HHHHHHHHHHC-------CCCEEEE--------ECC
T ss_conf 8899996--9999999999999986998999599----------89999999807-------9988998--------145
Q ss_pred --HCCHHHHHHHHHH--CCCEEEEEECCCCCCHHH
Q ss_conf --0076999999974--890488520577752589
Q gi|254780791|r 226 --HFNDEMIVRAIAN--SSIPIISAIGHETDWTLA 256 (529)
Q Consensus 226 --~FN~e~laraI~~--~~iPVisgIGHE~D~Tl~ 256 (529)
..|-.++++.|-+ ..+|||-=-||.......
T Consensus 55 mP~~~G~el~~~lr~~~~~~pvi~lt~~~~~~~~~ 89 (119)
T d1peya_ 55 IPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQ 89 (119)
T ss_dssp CTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
T ss_conf 89997899999999719999689970689999999
No 153
>d1pg5a1 c.78.1.1 (A:1-146) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=30.15 E-value=11 Score=13.33 Aligned_cols=94 Identities=26% Similarity=0.243 Sum_probs=44.8
Q ss_pred CCCCEEEEEECCCHHHHH-HHHHHHHHCCCEEEEEE--E--CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
Q ss_conf 265289998478425899-99998630597589997--2--100111103679999999974100357677758999516
Q gi|254780791|r 143 FIPKIIAVITSPTGAVIR-DILQRISCRFPLRVIIF--P--VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG 217 (529)
Q Consensus 143 ~~p~~i~vits~~~a~~~-D~~~~~~~r~p~~~~~~--p--~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RG 217 (529)
.-.+.||.+=-+.+-==+ =| -....+-+..++.+ + +.+... +++..+++.+..+ +|+||+-+.
T Consensus 36 l~gk~l~llF~epStRTR~SF-e~A~~~LGg~~i~~~~~~~~~~~kg---Es~~Dt~~~l~~~--------~d~iv~R~~ 103 (146)
T d1pg5a1 36 LSGKTISIAFFEPSTRTYLSF-QKAIINLGGDVIGFSGEESTSVAKG---ENLADTIRMLNNY--------SDGIVMRHK 103 (146)
T ss_dssp TTTCEEEEEESSCCHHHHHHH-HHHHHHTTCEEEEEECC-------C---CCHHHHHHHHHHH--------CSEEEEEES
T ss_pred CCCCEEEEEEECCCHHHHHHH-HHHHHHCCCCCCCCCCCHHHCCCCC---CCHHHHHHHHHHC--------CCEEEEEEC
T ss_conf 799889998636614789999-9999972576200230022024576---2399998676522--------876999851
Q ss_pred CCCHHHHHHCCHHHHHHHHHHCCCEEEEE-EC---CCCCCHHHHHH
Q ss_conf 88844422007699999997489048852-05---77752589886
Q gi|254780791|r 218 GGSIEDLWHFNDEMIVRAIANSSIPIISA-IG---HETDWTLADYA 259 (529)
Q Consensus 218 GGS~eDL~~FN~e~laraI~~~~iPVisg-IG---HE~D~Tl~D~V 259 (529)
++..+-.....+.+|||.| -| |=| -.|+|+-
T Consensus 104 ----------~~~~~~~~~~~~~vpvINag~~~~~HP~-Q~L~D~~ 138 (146)
T d1pg5a1 104 ----------YDGASRFASEISDIPVINAGDGKHEHPT-QAVIDIY 138 (146)
T ss_dssp ----------SBTHHHHHHHHCSSCEEEEEETTTBCHH-HHHHHHH
T ss_pred ----------CCCCCHHHHCCCCCCEEECCCCCCCCCC-HHHHHHH
T ss_conf ----------3442122411588167989889898740-9999999
No 154
>d1ko7a1 c.98.2.1 (A:1-129) HPr kinase/phoshatase HprK N-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=30.00 E-value=11 Score=13.31 Aligned_cols=53 Identities=25% Similarity=0.227 Sum_probs=27.6
Q ss_pred CEEEEECCCCCHHHHHHCCHHH---HHHHHHHCCCE-EEEEECCCCCCHHHHHHHCCC
Q ss_conf 5899951688844422007699---99999748904-885205777525898864123
Q gi|254780791|r 210 DIIILARGGGSIEDLWHFNDEM---IVRAIANSSIP-IISAIGHETDWTLADYAADLR 263 (529)
Q Consensus 210 D~iii~RGGGS~eDL~~FN~e~---laraI~~~~iP-VisgIGHE~D~Tl~D~VAD~R 263 (529)
+-|+|. |+.+..=|+.++++. ..+.++...+| +|-.-|++.+..+.+++-...
T Consensus 48 ~~l~i~-G~~e~~yl~~~~~~~~~~~i~~l~~~~~~~lIit~g~~~p~~li~~a~~~~ 104 (129)
T d1ko7a1 48 DRIQLL-GTTELSFYNLLPDEERKGRMRKLCRPETPAIIVTRDLEPPEELIEAAKEHE 104 (129)
T ss_dssp TSEEEE-CHHHHHHHHHSCHHHHTTHHHHHCCTTCCCEEECTTCCCCHHHHHHHHHTT
T ss_pred CEEEEE-ECHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 859998-047788886258078999999981789868999799999899999999809
No 155
>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}
Probab=29.71 E-value=11 Score=13.28 Aligned_cols=74 Identities=11% Similarity=0.160 Sum_probs=34.9
Q ss_pred EECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHH
Q ss_conf 84784258999999863059758999721001111036799999999741003576777589995168884442200769
Q gi|254780791|r 151 ITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 (529)
Q Consensus 151 its~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e 230 (529)
+++.+.....+....+...++.++..+.+=|-- +.++-+.++.+... ...+|++|-.=|.+...+++-++++
T Consensus 38 i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~---~~~v~~~~~~~~~~-----~g~iDilVnnAg~~~~~~~~~~~~~ 109 (260)
T d1h5qa_ 38 VIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN---TDIVTKTIQQIDAD-----LGPISGLIANAGVSVVKPATELTHE 109 (260)
T ss_dssp EEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC---HHHHHHHHHHHHHH-----SCSEEEEEECCCCCCCSCGGGCCHH
T ss_pred EEECCHHHHHHHHHHHHHHHCCCEEEEECCCCC---HHHHHHHHHHHHHH-----HCCCCEECCCCCCCCCCCHHHHCCC
T ss_conf 997987889999999999719946999844899---99999999999998-----2997676144333346777874011
Q ss_pred HH
Q ss_conf 99
Q gi|254780791|r 231 MI 232 (529)
Q Consensus 231 ~l 232 (529)
..
T Consensus 110 ~~ 111 (260)
T d1h5qa_ 110 DF 111 (260)
T ss_dssp HH
T ss_pred CC
T ss_conf 11
No 156
>d1ixca2 c.94.1.1 (A:90-294) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=29.35 E-value=11 Score=13.23 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=28.5
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 28999847842589999998630597-5899972100111103679999999
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~ 196 (529)
-|||+++|.....+-.++..++++|| +++.+.... ..++.+++..
T Consensus 4 lrIg~~~~~~~~~Lp~~l~~f~~~~P~v~l~i~~~~------~~~l~~~l~~ 49 (205)
T d1ixca2 4 LSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMT------KDEQVEGLLA 49 (205)
T ss_dssp EEEEECSGGGGTHHHHHHHHHHHHCTTEEEEEEECC------HHHHHHHHHH
T ss_pred EEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECC------CCCCHHHHHH
T ss_conf 999989688999999999999998879689999887------7442011022
No 157
>d2gy9b1 c.23.15.1 (B:8-225) Ribosomal protein S2 {Escherichia coli [TaxId: 562]}
Probab=29.24 E-value=11 Score=13.21 Aligned_cols=44 Identities=18% Similarity=0.390 Sum_probs=35.4
Q ss_pred CCCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
Q ss_conf 77758999516888444220076999999974890488520577752589886
Q gi|254780791|r 207 PRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259 (529)
Q Consensus 207 ~~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~V 259 (529)
..||+|+|. | +=.|...++.-..+.||||+=|--..|.+.+||.
T Consensus 148 ~lPd~vii~-------d--~~~~~~ai~Ea~~l~IP~I~ivDTn~dp~~idyp 191 (218)
T d2gy9b1 148 GLPDALFVI-------D--ADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFV 191 (218)
T ss_dssp CCCCEEEES-------C--TTTTHHHHHHHHHTTCCEEECCCSSSCGGGCTEE
T ss_pred CCCCEEEEC-------C--CCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCEE
T ss_conf 787145641-------6--6411899999987599779996479997657666
No 158
>d2btya1 c.73.1.2 (A:1-282) N-acetyl-l-glutamate kinase {Thermotoga maritima [TaxId: 2336]}
Probab=29.22 E-value=11 Score=13.21 Aligned_cols=29 Identities=31% Similarity=0.457 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHCCCEEEEEECCCCCCHH
Q ss_conf 07699999997489048852057775258
Q gi|254780791|r 227 FNDEMIVRAIANSSIPIISAIGHETDWTL 255 (529)
Q Consensus 227 FN~e~laraI~~~~iPVisgIGHE~D~Tl 255 (529)
-|.+.+-+.+-..-||||+.+|+-.+-.+
T Consensus 148 v~~~~i~~lL~~~~ipvi~~~~~~~~g~~ 176 (282)
T d2btya1 148 VNPEILHALIENDYIPVIAPVGIGEDGHS 176 (282)
T ss_dssp ECTHHHHHHHHTTCEEEEESEEECSSSCE
T ss_pred CCHHHHHHHHHCCCCEEECCCCCCCCCEE
T ss_conf 37687999983898446457656886035
No 159
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}
Probab=29.17 E-value=9.6 Score=13.81 Aligned_cols=11 Identities=45% Similarity=0.906 Sum_probs=5.9
Q ss_pred CCCEEEEECCCCC
Q ss_conf 7758999516888
Q gi|254780791|r 208 RPDIIILARGGGS 220 (529)
Q Consensus 208 ~~D~iii~RGGGS 220 (529)
.||+||| |||+
T Consensus 42 ~yDvvVI--GgG~ 52 (261)
T d1mo9a1 42 EYDAIFI--GGGA 52 (261)
T ss_dssp CBSEEEE--CCSH
T ss_pred CCCEEEE--CCCH
T ss_conf 2899998--9898
No 160
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]}
Probab=28.79 E-value=11 Score=13.15 Aligned_cols=94 Identities=23% Similarity=0.352 Sum_probs=56.6
Q ss_pred EEEEECCC--HHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH---
Q ss_conf 99984784--2589999998630597-58999721001111036799999999741003576777589995168884---
Q gi|254780791|r 148 IAVITSPT--GAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI--- 221 (529)
Q Consensus 148 i~vits~~--~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~--- 221 (529)
+-+|.... ..-+-|+++.++..+| ..| + =|+-+..+-...+..+ ..|.|.++-|+||.
T Consensus 113 ~ivId~A~G~~~~~~~~ik~ik~~~~~~~v-i-----aGnV~t~~~a~~l~~~----------GaD~v~VGig~Gs~ctt 176 (330)
T d1vrda1 113 VIVIDTAHGHSRRVIETLEMIKADYPDLPV-V-----AGNVATPEGTEALIKA----------GADAVKVGVGPGSICTT 176 (330)
T ss_dssp EEEECCSCCSSHHHHHHHHHHHHHCTTSCE-E-----EEEECSHHHHHHHHHT----------TCSEEEECSSCSTTCHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHCCCCCE-E-----EECHHHHHHHHHHHHC----------CCCEEEECCCCCCCCCC
T ss_conf 899946887733377999998875899878-9-----5030689999999983----------89988405326734465
Q ss_pred --------HHHHHCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC
Q ss_conf --------44220076999999974890488520577752589886412
Q gi|254780791|r 222 --------EDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 (529)
Q Consensus 222 --------eDL~~FN~e~laraI~~~~iPVisgIGHE~D~Tl~D~VAD~ 262 (529)
-++.++- .++.+.-...+|||+.=|.-+- -|.|+-+
T Consensus 177 ~~~~G~g~p~~sai~--~~~~~~~~~~vpvIAdGGi~~~---gdiakAl 220 (330)
T d1vrda1 177 RVVAGVGVPQLTAVM--ECSEVARKYDVPIIADGGIRYS---GDIVKAL 220 (330)
T ss_dssp HHHHCCCCCHHHHHH--HHHHHHHTTTCCEEEESCCCSH---HHHHHHH
T ss_pred CCEECCCCCCCHHHH--HHHHHHHHCCCEEEECCCCCCC---CCHHEEE
T ss_conf 013321125420577--8999997559669932771458---7531010
No 161
>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}
Probab=28.62 E-value=11 Score=13.13 Aligned_cols=28 Identities=11% Similarity=0.368 Sum_probs=15.8
Q ss_pred CCEEEEECCCCCHHHHHHCCHHHHHHHHHHCC
Q ss_conf 75899951688844422007699999997489
Q gi|254780791|r 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 (529)
Q Consensus 209 ~D~iii~RGGGS~eDL~~FN~e~laraI~~~~ 240 (529)
.|.+|+++.++.+ .|--..|+++...-.
T Consensus 180 ~d~~im~~~~a~i----~~aGp~vv~~~~ge~ 207 (251)
T d1vrga1 180 TDFIVMVDQTARM----FITGPNVIKAVTGEE 207 (251)
T ss_dssp SSEEEEETTTCBC----BSSCHHHHHHHHCCC
T ss_pred CCEEEEECCCEEE----EECCCHHHHHHCCCC
T ss_conf 7339997063247----742815666540785
No 162
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}
Probab=28.50 E-value=11 Score=13.12 Aligned_cols=30 Identities=10% Similarity=0.082 Sum_probs=24.2
Q ss_pred CCCEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 77589995168884442200769999999748904885
Q gi|254780791|r 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 208 ~~D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
.+|+|+|+ .++...++++.+..+...||++
T Consensus 62 ~iD~V~I~--------tp~~~H~~~~~~al~~gk~V~~ 91 (167)
T d1xeaa1 62 GVDAVMIH--------AATDVHSTLAAFFLHLGIPTFV 91 (167)
T ss_dssp CCSEEEEC--------SCGGGHHHHHHHHHHTTCCEEE
T ss_pred CCCEECCC--------CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 43200133--------3211112222111221100225
No 163
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=27.95 E-value=12 Score=13.04 Aligned_cols=92 Identities=21% Similarity=0.311 Sum_probs=45.3
Q ss_pred CEEEEEECCCHH---------HHHHHHH-HHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE
Q ss_conf 289998478425---------8999999-863059758999721001111036799999999741003576777589995
Q gi|254780791|r 146 KIIAVITSPTGA---------VIRDILQ-RISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILA 215 (529)
Q Consensus 146 ~~i~vits~~~a---------~~~D~~~-~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~ 215 (529)
+||.++-....+ ++.+.+. .+...+.-.+.+....+-|..+...+ .++...- ...++|+|||.
T Consensus 2 kri~~~GDSit~G~~~~~~~~~~~~~l~~~l~~~~~~~~~v~N~g~~G~~t~~~~----~~~~~~~---~~~~pd~vvi~ 74 (195)
T d1yzfa1 2 RKIVLFGDSITAGYLDEAVSPVLVDLVKRDIAAMGLEEVAVINAGMPGDTTEDGL----KRLNKEV---LIEKPDEVVIF 74 (195)
T ss_dssp EEEEEEESHHHHCBTTBSSCSHHHHHHHHHHHHTTBCCEEEEEEECTTCCHHHHH----HHHHHHT---GGGCCSEEEEE
T ss_pred CEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH----HHHHHHH---CCCCCCEEEEE
T ss_conf 8999994455228488886632899999998750588749994257753101354----3210231---15566779995
Q ss_pred CCCCCHHHHHH--------C--CHHHHHHHHHHCCCEEEEEE
Q ss_conf 16888444220--------0--76999999974890488520
Q gi|254780791|r 216 RGGGSIEDLWH--------F--NDEMIVRAIANSSIPIISAI 247 (529)
Q Consensus 216 RGGGS~eDL~~--------F--N~e~laraI~~~~iPVisgI 247 (529)
=|+- |.+. | |=..+++.+...+|.|++..
T Consensus 75 ~G~N---D~~~~~~~~~~~~~~~l~~~i~~~~~~~iiv~~~~ 113 (195)
T d1yzfa1 75 FGAN---DASLDRNITVATFRENLETMIHEIGSEKVILITPP 113 (195)
T ss_dssp CCTT---TTCTTSCCCHHHHHHHHHHHHHHHCGGGEEEECCC
T ss_pred CCCC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 2334---14432245789999999999998267988999346
No 164
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=27.87 E-value=12 Score=13.03 Aligned_cols=81 Identities=25% Similarity=0.340 Sum_probs=57.7
Q ss_pred CEEEEEECCC-------------HHHHHHHHHHHHHC---CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 2899984784-------------25899999986305---9758999721001111036799999999741003576777
Q gi|254780791|r 146 KIIAVITSPT-------------GAVIRDILQRISCR---FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209 (529)
Q Consensus 146 ~~i~vits~~-------------~a~~~D~~~~~~~r---~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~ 209 (529)
+||-||-.|+ +--+.|+.+.++.. ..+++..|-+-..| +++..|..... .+
T Consensus 2 ~kILilnGPNLNlLG~Rep~iYG~~TL~~i~~~~~~~~~~~g~~l~~~QSN~Eg-----eli~~i~~a~~--------~~ 68 (146)
T d1uqra_ 2 KKILLLNGPNLNMLGKREPHIYGSQTLSDIEQHLQQSAQAQGYELDYFQANGEE-----SLINRIHQAFQ--------NT 68 (146)
T ss_dssp CEEEEEECTTGGGTTCSSGGGTTCCCHHHHHHHHHHHHHHTTCEEEEEECSSHH-----HHHHHHHHTTT--------TC
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH-----HHHHHHHHHHC--------CC
T ss_conf 879998288810047778874884589999999999999728840226776799-----99999999752--------76
Q ss_pred CEEEEECCCCCHHHHHHCCHHHHHHHHHHCCCEEEE
Q ss_conf 589995168884442200769999999748904885
Q gi|254780791|r 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 (529)
Q Consensus 210 D~iii~RGGGS~eDL~~FN~e~laraI~~~~iPVis 245 (529)
|.|||-=|| |..-+..+-.|+..+.+|+|-
T Consensus 69 dgiIiNpga------~ThtS~al~Dal~~~~~P~iE 98 (146)
T d1uqra_ 69 DFIIINPGA------FTHTSVAIRDALLAVSIPFIE 98 (146)
T ss_dssp CEEEEECTT------HHHHCHHHHHHHHHHTCCEEE
T ss_pred CEEEECCCC------EEEEHHHHHHHHHHCCCCEEE
T ss_conf 625753654------055203378899872998899
No 165
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}
Probab=27.87 E-value=10 Score=13.48 Aligned_cols=12 Identities=33% Similarity=0.603 Sum_probs=8.6
Q ss_pred CCCEEEEECCCCCH
Q ss_conf 77589995168884
Q gi|254780791|r 208 RPDIIILARGGGSI 221 (529)
Q Consensus 208 ~~D~iii~RGGGS~ 221 (529)
.||+||| |||+-
T Consensus 3 ~YDviII--G~Gpa 14 (238)
T d1aoga1 3 IFDLVVI--GAGSG 14 (238)
T ss_dssp SBSEEEE--CCSHH
T ss_pred CCCEEEE--CCCHH
T ss_conf 1698999--98879
No 166
>d1ro0a_ d.264.1.2 (A:) Bifunctional DNA primase/polymerase N-terminal domain {Archaeon Sulfolobus islandicus [TaxId: 43080]}
Probab=27.58 E-value=12 Score=12.99 Aligned_cols=46 Identities=17% Similarity=0.206 Sum_probs=20.1
Q ss_pred CCC-EEEEEEECCC-CEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEC
Q ss_conf 886-2799987489-47999997352105866814598899999966752
Q gi|254780791|r 49 SSG-HAYFSLKDNH-SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFP 96 (529)
Q Consensus 49 ~sG-H~Yf~lkd~~-a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~ 96 (529)
+.| |+||...|.. .++......+....++++= +|-.|++-|++. |+
T Consensus 102 sGG~HlYf~~~e~p~~~~~~~~~~~g~~~iDir~-~g~yVv~PpS~~-~h 149 (210)
T d1ro0a_ 102 HGGIHIYVLSNDIPPHKINPLFEENGKGIIDLQS-YNSYVLGLGSCV-NH 149 (210)
T ss_dssp TSCEEEEEECSSCCSSCCCCSEEETTEEEEEEEC-TTCEEECTTCEE-EG
T ss_pred CCCEEEEEECCCCCCCCCCCCEECCCCCEEEEEE-ECCEEEECCCCC-CC
T ss_conf 9918999987887754213446617873588970-089899557424-66
No 167
>d1h9ra1 b.40.6.2 (A:123-199) C-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=27.54 E-value=12 Score=12.98 Aligned_cols=55 Identities=22% Similarity=0.196 Sum_probs=34.9
Q ss_pred EEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 999997054356888627999874894799999735210586681459889999996
Q gi|254780791|r 36 CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 (529)
Q Consensus 36 ~v~gEis~~~~~~~sGH~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~ 92 (529)
.+.|.|..+........+-.+|.|....+.+.|=+.....+ .++.|++|.+.-+-
T Consensus 8 ~l~g~V~~I~~~~~~~~V~v~l~~g~~~l~A~IT~~S~~~L--~L~~G~~V~a~iKA 62 (77)
T d1h9ra1 8 QWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQSGARL--GLDEGKEVLILLKA 62 (77)
T ss_dssp EEEEEEEEECCCSSEEEEEEEETTSSCEEEEEEEHHHHHHH--TCCTTCEEEEEECG
T ss_pred EEEEEEEEEEECCCCEEEEEEECCCCEEEEEEECHHHHHHC--CCCCCCEEEEEEEC
T ss_conf 88889999998997489999988999899999578999756--99999999999986
No 168
>d1ytla1 c.31.1.6 (A:17-174) Acetyl-CoA decarbonylase/synthase complex epsilon subunit 2, ACDE2 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=27.34 E-value=12 Score=12.96 Aligned_cols=19 Identities=11% Similarity=0.141 Sum_probs=10.7
Q ss_pred HHHHHHHHHCCCEEEEEEC
Q ss_conf 9999999748904885205
Q gi|254780791|r 230 EMIVRAIANSSIPIISAIG 248 (529)
Q Consensus 230 e~laraI~~~~iPVisgIG 248 (529)
+++.+-+..+.+||+|--+
T Consensus 35 ~e~~~~~~~~~ipv~~T~~ 53 (158)
T d1ytla1 35 FERVKKFVEKDITVVATGS 53 (158)
T ss_dssp HHHHHHHHTSSSEEEEETT
T ss_pred HHHHHHHHHHCCCEEECCC
T ss_conf 9999999986939996135
No 169
>d1gtza_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Streptomyces coelicolor [TaxId: 1902]}
Probab=27.17 E-value=12 Score=12.94 Aligned_cols=68 Identities=12% Similarity=0.150 Sum_probs=47.5
Q ss_pred HHHHHHHH---HHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHH
Q ss_conf 99999986---305975899972100111103679999999974100357677758999516888444220076999999
Q gi|254780791|r 159 IRDILQRI---SCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 (529)
Q Consensus 159 ~~D~~~~~---~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~lara 235 (529)
+.|+-..+ .+...+++..|-+=. +.+|+..|..... .+|.|||-=|| |..-+..+-.|
T Consensus 32 L~~i~~~~~~~a~~~~~~v~~~QSN~-----EgelId~I~~~~~--------~~~giIINpga------~ThtSial~DA 92 (149)
T d1gtza_ 32 LADVEALCVKAAAAHGGTVDFRQSNH-----EGELVDWIHEARL--------NHCGIVINPAA------YSHTSVAILDA 92 (149)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEECSC-----HHHHHHHHHHHHH--------HCSEEEEECTT------HHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEHHHH-----HHHHHHHHHHHHH--------CCCEEEECCHH------HHHHHHHHHHH
T ss_conf 99999999999997498477614646-----9999999999864--------04255735388------77765778999
Q ss_pred HHHCC-CEEEE
Q ss_conf 97489-04885
Q gi|254780791|r 236 IANSS-IPIIS 245 (529)
Q Consensus 236 I~~~~-iPVis 245 (529)
+...+ +|+|-
T Consensus 93 l~~~~~~P~IE 103 (149)
T d1gtza_ 93 LNTCDGLPVVE 103 (149)
T ss_dssp HHTSTTCCEEE
T ss_pred HHHHCCCCEEE
T ss_conf 99704897799
No 170
>d1qvwa_ c.23.16.2 (A:) Hypothetical protein Ydr533Cp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.07 E-value=12 Score=12.92 Aligned_cols=66 Identities=15% Similarity=0.119 Sum_probs=43.9
Q ss_pred CCCCEEEEECCCCCHHHHHHCCHH---HHHHHHHHCCCEEEEEECCCCCCHHH--------HHHHCCCCCCCHHHHHHHC
Q ss_conf 777589995168884442200769---99999974890488520577752589--------8864123777214567633
Q gi|254780791|r 207 PRPDIIILARGGGSIEDLWHFNDE---MIVRAIANSSIPIISAIGHETDWTLA--------DYAADLRAPTPTGAAEMAV 275 (529)
Q Consensus 207 ~~~D~iii~RGGGS~eDL~~FN~e---~laraI~~~~iPVisgIGHE~D~Tl~--------D~VAD~Ra~TPTaAAElav 275 (529)
..||+|+|.=|.|...||+ +++ .+++..++..- +|.+|.|-.-.-+. .+++..++-.-|.+-|..+
T Consensus 96 ~~ydav~ipGG~g~~~dl~--~~~~l~~li~~~~~~gk-~vaAIChGp~~L~~~~~~~~g~~ll~Gk~vT~f~~~ee~~~ 172 (236)
T d1qvwa_ 96 DDYQIFMASAGHGTLFDYP--KAKDLQDIASEIYANGG-VVAAVCHGPAMFDGLTDKKTGRPLIEGKSITGFTDVGETIM 172 (236)
T ss_dssp GGCSEEEECCSTTHHHHGG--GCHHHHHHHHHHHHTTC-EEEEETTGGGGGTTCBCTTTCSBTTTTCEECCSCHHHHHHT
T ss_pred HHCCEEEEECCCCCHHCCH--HHHHHHHHHHHHHHCCC-EEEEEHHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHC
T ss_conf 5798999807764400005--66678999999986698-58982135799987752355665006725415786888631
No 171
>d2pjua1 c.92.3.1 (A:11-196) Propionate catabolism operon regulatory protein PrpR {Escherichia coli [TaxId: 562]}
Probab=26.68 E-value=12 Score=12.87 Aligned_cols=61 Identities=18% Similarity=0.245 Sum_probs=26.0
Q ss_pred CCCEEEEEECCC-HHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHH
Q ss_conf 652899984784-2589999998630597589997210011110367999999997410035767775899951688844
Q gi|254780791|r 144 IPKIIAVITSPT-GAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 (529)
Q Consensus 144 ~p~~i~vits~~-~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~e 222 (529)
++.+||||+.++ ..++..|...+. +++..|. ++ .+.++-.+++.+...+ +|+|| |||...
T Consensus 93 ~~~kiavV~~~~~~~~~~~~~~ll~----~~i~~~~--~~---~~~e~~~~v~~l~~~G-------~~vVV---G~~~~~ 153 (186)
T d2pjua1 93 LTSSIGVVTYQETIPALVAFQKTFN----LRLDQRS--YI---TEEDARGQINELKANG-------TEAVV---GAGLIT 153 (186)
T ss_dssp TTSCEEEEEESSCCHHHHHHHHHHT----CCEEEEE--ES---SHHHHHHHHHHHHHTT-------CCEEE---ESHHHH
T ss_pred HCCCEEEEECCCCCHHHHHHHHHHC----CCEEEEE--EC---CHHHHHHHHHHHHHCC-------CCEEE---CCHHHH
T ss_conf 5897899917762569999999959----9648999--63---8899999999999879-------98999---985999
Q ss_pred H
Q ss_conf 4
Q gi|254780791|r 223 D 223 (529)
Q Consensus 223 D 223 (529)
|
T Consensus 154 ~ 154 (186)
T d2pjua1 154 D 154 (186)
T ss_dssp H
T ss_pred H
T ss_conf 9
No 172
>d2j85a1 d.321.1.1 (A:2-116) Hypothetical protein B116 {Sulfolobus turreted icosahedral virus, STIV [TaxId: 269145]}
Probab=26.46 E-value=12 Score=12.84 Aligned_cols=15 Identities=33% Similarity=0.538 Sum_probs=9.1
Q ss_pred HCCCEEEEEECCCCC
Q ss_conf 489048852057775
Q gi|254780791|r 238 NSSIPIISAIGHETD 252 (529)
Q Consensus 238 ~~~iPVisgIGHE~D 252 (529)
--+-.+||||||+--
T Consensus 39 ~~~~~~isaIGH~aT 53 (115)
T d2j85a1 39 LEDGTLINAIGHDST 53 (115)
T ss_dssp HHTTCEEECCCCHHH
T ss_pred CCCCCEEEEECCHHH
T ss_conf 135553663062989
No 173
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}
Probab=26.05 E-value=12 Score=12.78 Aligned_cols=87 Identities=21% Similarity=0.308 Sum_probs=50.8
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHC-CC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH
Q ss_conf 289998478425899999986305-97-5899972100111103679999999974100357677758999516888444
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCR-FP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r-~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eD 223 (529)
.-|+||+..+..-..++...+.+- .+ ++| +....+|.+.| +.| ... -+|++ | |-|++-|
T Consensus 16 ~iipvlr~~~~~~a~~~~~al~~~Gi~~iEi-----tl~tp~a~~~I-~~l---~~~-------~p~~~-v--GaGTV~~ 76 (213)
T d1wbha1 16 PVVPVIVVKKLEHAVPMAKALVAGGVRVLNV-----TLRTECAVDAI-RAI---AKE-------VPEAI-V--GAGTVLN 76 (213)
T ss_dssp SEEEEECCSSGGGHHHHHHHHHHTTCCEEEE-----ESCSTTHHHHH-HHH---HHH-------CTTSE-E--EEESCCS
T ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCCEEEE-----ECCCHHHHHHH-HHH---HHH-------CCCCE-E--ECCCCCC
T ss_conf 9899997899999999999999879988999-----37982599999-999---997-------89871-5--2230463
Q ss_pred ---H------------HHCCHHHHHHHHHHCCCEEEEEECCCC
Q ss_conf ---2------------200769999999748904885205777
Q gi|254780791|r 224 ---L------------WHFNDEMIVRAIANSSIPIISAIGHET 251 (529)
Q Consensus 224 ---L------------~~FN~e~laraI~~~~iPVisgIGHE~ 251 (529)
+ .+--+++|++.-.+..+|+|-|+-.-|
T Consensus 77 ~~~~~~a~~aGa~FivSP~~~~~v~~~a~~~~i~~iPGv~Tps 119 (213)
T d1wbha1 77 PQQLAEVTEAGAQFAISPGLTEPLLKAATEGTIPLIPGISTVS 119 (213)
T ss_dssp HHHHHHHHHHTCSCEEESSCCHHHHHHHHHSSSCEEEEESSHH
T ss_pred HHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 8999999977992997898988999999855987558828779
No 174
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=25.54 E-value=13 Score=12.71 Aligned_cols=86 Identities=21% Similarity=0.241 Sum_probs=44.8
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH---
Q ss_conf 28999847842589999998630597-58999721001111036799999999741003576777589995168884---
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI--- 221 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~--- 221 (529)
.-||+==-.++.-+.++.+.+.++.+ ..++-==-.-+|-.--.+|+.+ .|.|+|+||--+.
T Consensus 124 D~ialSFVrs~~DI~~~r~~l~~~g~~~~IiaKIE~~~al~NldeIi~~---------------sDgIMIaRGDLg~ei~ 188 (282)
T d2g50a2 124 DMVFASFIRKAADVHEVRKILGEKGKNIKIISKIENHEGVRRFDEILEA---------------SDGIMVARGDLGIEIP 188 (282)
T ss_dssp SEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHH---------------SSEEEEEHHHHHHHSC
T ss_pred CCEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCHHHCCC---------------CCEEEEECCCCCCCCC
T ss_conf 6425346698899999999999739985378753214555341223123---------------6604665230000267
Q ss_pred -HHHHHCCHHHHHHHHHHCCCEEEEEE
Q ss_conf -44220076999999974890488520
Q gi|254780791|r 222 -EDLWHFNDEMIVRAIANSSIPIISAI 247 (529)
Q Consensus 222 -eDL~~FN~e~laraI~~~~iPVisgI 247 (529)
|++-..=...+.++- ....|||+|-
T Consensus 189 ~e~vp~~Qk~Ii~~~~-~~~kpvivAt 214 (282)
T d2g50a2 189 AEKVFLAQKMIIGRCN-RAGKPVICAT 214 (282)
T ss_dssp GGGHHHHHHHHHHHHH-HHTCCEEEES
T ss_pred HHHHHHHHHHHHHHHH-HCCCCEEEEC
T ss_conf 8776789999999998-5599379854
No 175
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=25.52 E-value=13 Score=12.71 Aligned_cols=83 Identities=11% Similarity=0.209 Sum_probs=47.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHH
Q ss_conf 28999847842589999998630597589997210011110367999999997410035767775899951688844422
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~ 225 (529)
|||-||= +......++..+=+++++++.... -| ..|++.+... .||+|++- -.|=
T Consensus 2 krILiVD--D~~~~~~~l~~~L~~~g~~v~~a~---~~-------~~al~~~~~~-------~~dlil~D------~~mp 56 (123)
T d1mb3a_ 2 KKVLIVE--DNELNMKLFHDLLEAQGYETLQTR---EG-------LSALSIAREN-------KPDLILMD------IQLP 56 (123)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEES---CH-------HHHHHHHHHH-------CCSEEEEE------SBCS
T ss_pred CEEEEEE--CCHHHHHHHHHHHHHCCCEEEEEC---CH-------HHHHHHHHHC-------CCCEEEEE------ECCC
T ss_conf 6699998--889999999999998799999978---88-------9999999817-------98889987------5027
Q ss_pred HCCHHHHHHHHHHC----CCEEEEEECCCCCC
Q ss_conf 00769999999748----90488520577752
Q gi|254780791|r 226 HFNDEMIVRAIANS----SIPIISAIGHETDW 253 (529)
Q Consensus 226 ~FN~e~laraI~~~----~iPVisgIGHE~D~ 253 (529)
..|-.++++.|-+. .+|||.-.|+....
T Consensus 57 ~~dG~el~~~ir~~~~~~~iPii~lt~~~~~~ 88 (123)
T d1mb3a_ 57 EISGLEVTKWLKEDDDLAHIPVVAVTAFAMKG 88 (123)
T ss_dssp SSBHHHHHHHHHHSTTTTTSCEEEEC------
T ss_pred CCCHHHHHHHHHHCCCCCCCCEEEEEEECCHH
T ss_conf 98489999999828876899969999854789
No 176
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]}
Probab=25.40 E-value=13 Score=12.69 Aligned_cols=51 Identities=18% Similarity=0.356 Sum_probs=27.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC-CCHHHHHHCCHHHHHH-HHHHCCCEEEE
Q ss_conf 1111036799999999741003576777589995168-8844422007699999-99748904885
Q gi|254780791|r 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG-GSIEDLWHFNDEMIVR-AIANSSIPIIS 245 (529)
Q Consensus 182 QG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGG-GS~eDL~~FN~e~lar-aI~~~~iPVis 245 (529)
.+.....+|++..+.. .+|+||++.=| +.+..+ .|.. ++. -+-.++.||+.
T Consensus 82 ~~g~~~~~I~~~a~~~----------~~dliV~G~~~~~~~~~~-~~Gs--~~~~ll~~~~~pVlv 134 (135)
T d2z3va1 82 LEGVPAEAILQAARAE----------KADLIVMGTRGLGALGSL-FLGS--QSQRVVAEAPCPVLL 134 (135)
T ss_dssp EESCHHHHHHHHHHHT----------TCSEEEEESSCSSSCBCS-SCBH--HHHHHHHHCSSCEEE
T ss_pred ECCCHHHHHHHHHHHH----------HEEEEEECCCCCCCCCCC-CCCC--HHHHHHHHCCCCEEE
T ss_conf 8277689999875200----------011577536799852104-1370--999999709999995
No 177
>d2masa_ c.70.1.1 (A:) Inosine-uridine nucleoside N-ribohydrolase, IU-NH {Crithidia fasciculata [TaxId: 5656]}
Probab=25.27 E-value=13 Score=12.67 Aligned_cols=82 Identities=18% Similarity=0.270 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC-------HHHHHHC
Q ss_conf 425899999986305975899972100111103679999999974100357677758999516888-------4442200
Q gi|254780791|r 155 TGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS-------IEDLWHF 227 (529)
Q Consensus 155 ~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS-------~eDL~~F 227 (529)
...+...++..+...+|-+|.|.- -+.-..|..||+..-.... ++.-|+|. ||+- ..+...|
T Consensus 101 ~~~a~~~~i~~~~~~~p~~itiva-----~GPLTNlA~al~~~P~~~~-----~ik~iviM-GG~~~~GN~~~~aEfN~~ 169 (313)
T d2masa_ 101 ERHAVNLIIDLVMSHEPKTITLVP-----TGGLTNIAMAARLEPRIVD-----RVKEVVLM-GGGYHEGNATSVAEFNII 169 (313)
T ss_dssp SSCHHHHHHHHHHHSCTTCEEEEE-----CSCSHHHHHHHHHCTHHHH-----HSCEEEEE-CCCSSCCSSSSSCCHHHH
T ss_pred CHHHHHHHHHHHHHCCCCCEEEEE-----CCCCHHHHHHHHHHHHHHH-----HCCEEEEE-CCCCCCCCCCCCCCCCEE
T ss_conf 113468999987525998579997-----4771389999986155663-----14738995-268789997631121330
Q ss_pred CHHHHHHHHHHCCCEEEEEEC
Q ss_conf 769999999748904885205
Q gi|254780791|r 228 NDEMIVRAIANSSIPIISAIG 248 (529)
Q Consensus 228 N~e~laraI~~~~iPVisgIG 248 (529)
+|.+=|+.|+++++|| +-||
T Consensus 170 ~DPeAA~iVl~s~~~i-~~v~ 189 (313)
T d2masa_ 170 IDPEAAHIVFNESWQV-TMVG 189 (313)
T ss_dssp TCHHHHHHHHHSSSCE-EEEC
T ss_pred ECHHHHHHHHCCCCCE-EEEC
T ss_conf 0847879985369985-9966
No 178
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=24.96 E-value=13 Score=12.63 Aligned_cols=82 Identities=12% Similarity=0.109 Sum_probs=44.7
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHH
Q ss_conf 28999847842589999998630597589997210011110367999999997410035767775899951688844422
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~ 225 (529)
.+|-||-- -...++++..+=.++++.+...... .+|++.+... .||+|++--. |=
T Consensus 9 ~~ILiVDD--~~~~~~~l~~~L~~~g~~v~~a~~g----------~ea~~~~~~~-------~~dlillD~~------mP 63 (133)
T d2ayxa1 9 MMILVVDD--HPINRRLLADQLGSLGYQCKTANDG----------VDALNVLSKN-------HIDIVLSDVN------MP 63 (133)
T ss_dssp CEEEEEES--SHHHHHHHHHHHHHHTSEEEEECCS----------HHHHHHHHHS-------CCSEEEEEES------SC
T ss_pred CEEEEEEC--CHHHHHHHHHHHHHCCCEEEEECCH----------HHHHHHHHCC-------CCEEEEEECC------CC
T ss_conf 88999989--9999999999999759889997748----------7789987345-------7459999536------89
Q ss_pred HCCHHHHHHHHHH----CCCEEEEEECCCCC
Q ss_conf 0076999999974----89048852057775
Q gi|254780791|r 226 HFNDEMIVRAIAN----SSIPIISAIGHETD 252 (529)
Q Consensus 226 ~FN~e~laraI~~----~~iPVisgIGHE~D 252 (529)
-.|-.++++.|-+ .||+++||-+.+.|
T Consensus 64 ~~dG~el~~~ir~~~~~~pii~lt~~~~~~~ 94 (133)
T d2ayxa1 64 NMDGYRLTQRIRQLGLTLPVIGVTANALAEE 94 (133)
T ss_dssp SSCCHHHHHHHHHHHCCSCEEEEESSTTSHH
T ss_pred CCCHHHHHHHHHHHCCCCCEEEEECCCCHHH
T ss_conf 9988999999997688988899966699999
No 179
>d1jvna2 c.23.16.1 (A:-3-229) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]}
Probab=24.81 E-value=13 Score=12.60 Aligned_cols=16 Identities=19% Similarity=0.412 Sum_probs=7.9
Q ss_pred HHHHHCCCCCCCHHHH
Q ss_conf 9886412377721456
Q gi|254780791|r 256 ADYAADLRAPTPTGAA 271 (529)
Q Consensus 256 ~D~VAD~Ra~TPTaAA 271 (529)
-.|+-..++++||--+
T Consensus 209 ~nFl~~~~~~~~~~~~ 224 (232)
T d1jvna2 209 ENFLKQQSPPIPNYSA 224 (232)
T ss_dssp HHHHTTCCCCCCCCCH
T ss_pred HHHHHCCCCCCCCCCH
T ss_conf 9998256899998674
No 180
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]}
Probab=24.23 E-value=13 Score=12.52 Aligned_cols=58 Identities=24% Similarity=0.306 Sum_probs=37.0
Q ss_pred EEEEECCCHHH--HHHHHHHHHHCCC--EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 99984784258--9999998630597--58999721001111036799999999741003576777589995168884
Q gi|254780791|r 148 IAVITSPTGAV--IRDILQRISCRFP--LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 148 i~vits~~~a~--~~D~~~~~~~r~p--~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
+-+|.+..|.. .-|+++.++..++ ..|+ =|+-|..+....|..+ ..|.|.++=|+||.
T Consensus 125 ~i~IDvAhG~~~~v~~~i~~ir~~~~~~~~Ii------AGNVaT~e~~~~L~~a----------GaD~vkVGIG~Gs~ 186 (362)
T d1pvna1 125 VLCIDSSDGFSEWQKITIGWIREKYGDKVKVG------AGNIVDGEGFRYLADA----------GADFIKIGIGGGSI 186 (362)
T ss_dssp EEEECCSCCCBHHHHHHHHHHHHHHGGGSCEE------EEEECSHHHHHHHHHH----------TCSEEEECSSCSTT
T ss_pred EEEECHHCCCHHHHHHHHHHHHHHHCCCEEEE------CCCCCCHHHHHHHHHH----------CCCEEEECCCCCCC
T ss_conf 77530000101578899999988653310342------1244678899999972----------97579844303434
No 181
>d1ywua1 b.45.2.1 (A:1-125) Hypothetical protein PA4608 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.93 E-value=13 Score=12.48 Aligned_cols=68 Identities=1% Similarity=-0.114 Sum_probs=43.7
Q ss_pred CCEEEEEEECCCCCCCCCCEEEEEEECCCC---EEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEE
Q ss_conf 718999997054356888627999874894---79999973521058668145988999999667528843799999710
Q gi|254780791|r 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHS---RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 (529)
Q Consensus 33 ~~~~v~gEis~~~~~~~sGH~Yf~lkd~~a---~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~ 109 (529)
+..++.|++.|++ -+| +++.+.+.-. -..|.+ .+.+..+..+.+.|+| +|...+++-+-...|+
T Consensus 25 ~~~~~~~~~~DiS---~~G-~~i~~~~~~~~~~~~~v~l--------~l~l~~~~~i~~~~~V-v~~~~~~~Gl~f~~id 91 (125)
T d1ywua1 25 GERRWEVLLHDVS---LHG-ILVGQPQDWNGDPQRPFEA--------RLYLGLDVLIRMEISL-AWARDGLLGFECQHID 91 (125)
T ss_dssp TTEEEEEEEEEEC---SSE-EEEECSSCCCCCTTSEEEE--------EEESSSSCEEEEEEEE-EEEETTEEEEEEEEEC
T ss_pred CCEEEEEEEEEEC---CCC-EEEECCCCCCCCCCCEEEE--------EEECCCCCEEEEEEEE-EEECCCEEEEEEEECC
T ss_conf 9999999999821---784-8997488778899987999--------9986999599999999-9974999999998669
Q ss_pred ECCC
Q ss_conf 1680
Q gi|254780791|r 110 PSGS 113 (529)
Q Consensus 110 ~~g~ 113 (529)
+...
T Consensus 92 ~ds~ 95 (125)
T d1ywua1 92 LDSI 95 (125)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 8999
No 182
>d1dxha1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.82 E-value=14 Score=12.46 Aligned_cols=99 Identities=20% Similarity=0.188 Sum_probs=52.0
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEE-EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
Q ss_conf 0265289998478425899999986305975899-972100111103679999999974100357677758999516888
Q gi|254780791|r 142 PFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI-IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220 (529)
Q Consensus 142 P~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~-~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS 220 (529)
+.-.+.|+.+=-+.+.-=+==-.....+-+..++ +-+...+ -+-.+++...+..+..+ +|+||+ |+-
T Consensus 42 ~L~~K~v~~lF~epStRTR~SFe~A~~~LG~~~i~l~~~~s~-~~kgEs~~Dt~~~ls~~--------~d~ivi-R~~-- 109 (150)
T d1dxha1 42 HLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQ-IGHKESMKDTARVLGRM--------YDAIEY-RGF-- 109 (150)
T ss_dssp CCTTCEEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTTCC-BTTTBCHHHHHHHHHHH--------CSEEEE-ECS--
T ss_pred CCCCCEEEEEECCCCCCEEEEEEEEHHHCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHCC--------CCEEEE-EEC--
T ss_conf 589988999972798761577654112235432114530101-46675034556654236--------505999-833--
Q ss_pred HHHHHHCCHHHHHHHHHHCCCEEEEEECC--CCCCHHHHHH
Q ss_conf 44422007699999997489048852057--7752589886
Q gi|254780791|r 221 IEDLWHFNDEMIVRAIANSSIPIISAIGH--ETDWTLADYA 259 (529)
Q Consensus 221 ~eDL~~FN~e~laraI~~~~iPVisgIGH--E~D~Tl~D~V 259 (529)
++..+-.....+.+|||-|=|- ..=-.|+|+.
T Consensus 110 -------~~~~~~~~~~~~~iPVINg~~~~~HPtQ~L~D~~ 143 (150)
T d1dxha1 110 -------KQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVL 143 (150)
T ss_dssp -------CHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHH
T ss_pred -------CHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHH
T ss_conf -------0667999887469768958998877089999999
No 183
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=23.77 E-value=14 Score=12.45 Aligned_cols=11 Identities=18% Similarity=0.739 Sum_probs=7.1
Q ss_pred CCCEEEEECCCCC
Q ss_conf 7758999516888
Q gi|254780791|r 208 RPDIIILARGGGS 220 (529)
Q Consensus 208 ~~D~iii~RGGGS 220 (529)
+|||||| |||.
T Consensus 3 ~~DviVI--G~Gp 13 (223)
T d1ebda1 3 ETETLVV--GAGP 13 (223)
T ss_dssp ECSEEEE--CCSH
T ss_pred CCCEEEE--CCCH
T ss_conf 1899998--9789
No 184
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=23.64 E-value=14 Score=12.43 Aligned_cols=26 Identities=31% Similarity=0.215 Sum_probs=13.2
Q ss_pred HHCCHH---HHHHHHHHC--CCEEEEEECCC
Q ss_conf 200769---999999748--90488520577
Q gi|254780791|r 225 WHFNDE---MIVRAIANS--SIPIISAIGHE 250 (529)
Q Consensus 225 ~~FN~e---~laraI~~~--~iPVisgIGHE 250 (529)
+|.||. .+++|+.+. ..|-+..||--
T Consensus 201 ~~~~d~~a~g~~~Al~~~G~~~~~i~~vg~d 231 (305)
T d8abpa_ 201 VGMNDSTVLGGVRATEGQGFKAADIIGIGIN 231 (305)
T ss_dssp ECSSHHHHHHHHHHHHHTTCCGGGEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 3310688998788998754147885499856
No 185
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=23.31 E-value=14 Score=12.38 Aligned_cols=42 Identities=19% Similarity=0.209 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 261001631026528999847842589999998630597589997
Q gi|254780791|r 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF 177 (529)
Q Consensus 133 fd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~ 177 (529)
|.. -+-++|.+++++.||-+-++|. |...++.+...-.++++
T Consensus 34 ~~~-~~~~~p~~~~kVvVIGGGdtA~--D~A~~a~r~GA~~V~vi 75 (153)
T d1gtea3 34 MCA-CHSPLPSIRGAVIVLGAGDTAF--DCATSALRCGARRVFLV 75 (153)
T ss_dssp TBS-CCCCCCCCCSEEEEECSSHHHH--HHHHHHHHTTCSEEEEE
T ss_pred CCC-CCCCCCCCCCEEEEECCCHHHH--HHHHHHHHCCCCCEEEE
T ss_conf 774-4576656798799988885399--99999987677411599
No 186
>d2vgba1 b.58.1.1 (A:160-261) Pyruvate kinase (PK) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.27 E-value=14 Score=12.38 Aligned_cols=25 Identities=28% Similarity=0.286 Sum_probs=15.6
Q ss_pred HHHCCCCCEEEEEEECEEEEEEEEECC
Q ss_conf 789299986999991109999995057
Q gi|254780791|r 476 KRNLATKTRILINFFDGQANAIVINKA 502 (529)
Q Consensus 476 ~~~l~~gd~i~i~l~DG~v~a~V~~k~ 502 (529)
.+++++|+.|-+ .||++..+|+++.
T Consensus 49 ~~~v~~G~~Ili--DDG~i~l~V~~v~ 73 (102)
T d2vgba1 49 VRVVPVGGRIYI--DDGLISLVVQKIG 73 (102)
T ss_dssp HHHSCTTCEEEE--TTTTEEEEEEEEC
T ss_pred HHHCCCCCEEEE--CCCCEEEEEEECC
T ss_conf 531377778998--5881689998537
No 187
>d1di0a_ c.16.1.1 (A:) Lumazine synthase {Brucella abortus [TaxId: 235]}
Probab=23.24 E-value=14 Score=12.37 Aligned_cols=89 Identities=22% Similarity=0.285 Sum_probs=52.9
Q ss_pred CEEEEEECCCHHHH-----HHHHHHHHHC-CC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE----E
Q ss_conf 28999847842589-----9999986305-97-589997210011110367999999997410035767775899----9
Q gi|254780791|r 146 KIIAVITSPTGAVI-----RDILQRISCR-FP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII----L 214 (529)
Q Consensus 146 ~~i~vits~~~a~~-----~D~~~~~~~r-~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii----i 214 (529)
.||+||.|.=-.-+ ...++.+.+. .+ .++.++.++ |. -||--+++.+-... +||.|| |
T Consensus 3 ~rI~IV~s~~n~~i~~~ll~~a~~~l~~~g~~~~~i~~~~VP--Ga---~EiP~aa~~l~~~~------~~daiI~lG~V 71 (148)
T d1di0a_ 3 FKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVP--GA---YEIPLHAKTLARTG------RYAAIVGAAFV 71 (148)
T ss_dssp EEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEES--SG---GGHHHHHHHHHHTS------CCSEEEEEEEC
T ss_pred CEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--CH---HHHHHHHHHHHHHC------CCCEEEEEEEE
T ss_conf 889999802879999999999999999859993006999738--75---66289999987514------66769999887
Q ss_pred ECCCCCHHHHHHCCHHHHHHHH----HHCCCEEEEEEC
Q ss_conf 5168884442200769999999----748904885205
Q gi|254780791|r 215 ARGGGSIEDLWHFNDEMIVRAI----ANSSIPIISAIG 248 (529)
Q Consensus 215 ~RGGGS~eDL~~FN~e~laraI----~~~~iPVisgIG 248 (529)
+||+=.--|+.+ ..+++.| ....+||+.||=
T Consensus 72 IkGeT~H~e~I~---~~v~~gl~~v~l~~~~Pv~~gVL 106 (148)
T d1di0a_ 72 IDGGIYDHDFVA---TAVINGMMQVQLETEVPVLSVVL 106 (148)
T ss_dssp CCCSSBCCHHHH---HHHHHHHHHHHHHHCCCEEEEEE
T ss_pred ECCCCHHHHHHH---HHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 638864888999---99999999998761996799960
No 188
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.07 E-value=14 Score=12.35 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=20.9
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCC
Q ss_conf 28999847842589999998630597
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFP 171 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p 171 (529)
+++-||.+|+|+|-.-+++.|.+++|
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 77199999899999999999997097
No 189
>d1e0ta1 b.58.1.1 (A:70-167) Pyruvate kinase (PK) {Escherichia coli [TaxId: 562]}
Probab=22.86 E-value=14 Score=12.31 Aligned_cols=25 Identities=20% Similarity=0.247 Sum_probs=12.2
Q ss_pred HHHCCCCCEEEEEEECEEEEEEEEECC
Q ss_conf 789299986999991109999995057
Q gi|254780791|r 476 KRNLATKTRILINFFDGQANAIVINKA 502 (529)
Q Consensus 476 ~~~l~~gd~i~i~l~DG~v~a~V~~k~ 502 (529)
.+++++|+.|-+ .||.+..+|+++.
T Consensus 45 ~~~v~~Gd~Ili--dDG~i~l~V~~v~ 69 (98)
T d1e0ta1 45 TTDLSVGNTVLV--DDGLIGMEVTAIE 69 (98)
T ss_dssp HHHCCTTCEEEE--TTTTEEEEEEEEE
T ss_pred HHHHCCCCEEEE--CCCCEEEEEEECC
T ss_conf 665168849997--6772268996336
No 190
>d1nqua_ c.16.1.1 (A:) Lumazine synthase {Aquifex aeolicus [TaxId: 63363]}
Probab=22.83 E-value=14 Score=12.31 Aligned_cols=90 Identities=19% Similarity=0.168 Sum_probs=52.7
Q ss_pred CCEEEEEECCCHHHHHH-----HHHHHHHC-CC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE----
Q ss_conf 52899984784258999-----99986305-97-589997210011110367999999997410035767775899----
Q gi|254780791|r 145 PKIIAVITSPTGAVIRD-----ILQRISCR-FP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII---- 213 (529)
Q Consensus 145 p~~i~vits~~~a~~~D-----~~~~~~~r-~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii---- 213 (529)
-.|||||.|.==.-+-| .+..+.+. .+ ..+.++.++ |. -||--+++.+.... +||.+|
T Consensus 12 ~~ri~IV~s~~n~~I~~~Ll~ga~~~l~~~g~~~~~i~v~~VP--Ga---~EiP~~~~~l~~~~------~~daiIaLG~ 80 (154)
T d1nqua_ 12 GLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVP--GS---WEIPVAAGELARKE------DIDAVIAIGV 80 (154)
T ss_dssp TCCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEES--SG---GGHHHHHHHHHTCT------TCCEEEEEEE
T ss_pred CCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEC--CH---HHHHHHHHHHHHHC------CCCEEEEEEE
T ss_conf 9889999945769999999999999999859984562567708--77---77179999998604------7784898889
Q ss_pred EECCCCCHHHHHHCCHHHHHHHH----HHCCCEEEEEEC
Q ss_conf 95168884442200769999999----748904885205
Q gi|254780791|r 214 LARGGGSIEDLWHFNDEMIVRAI----ANSSIPIISAIG 248 (529)
Q Consensus 214 i~RGGGS~eDL~~FN~e~laraI----~~~~iPVisgIG 248 (529)
|+||.=.--|+.| ..+++.| ....+||+.||=
T Consensus 81 VIkGeT~H~e~I~---~~v~~gl~~lsl~~~~Pi~~GIL 116 (154)
T d1nqua_ 81 LIRGATPHFDYIA---SEVSKGLANLSLELRKPITFGVI 116 (154)
T ss_dssp EECCSSTHHHHHH---HHHHHHHHHHHHHHTSCEEEEEE
T ss_pred EEECCCHHHHHHH---HHHHHHHHHHHHHCCCCEEEEEC
T ss_conf 9717860777999---99999999998753997798622
No 191
>d1ejba_ c.16.1.1 (A:) Lumazine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.71 E-value=14 Score=12.29 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=54.5
Q ss_pred CCEEEEEECCCHHHHHH-----HHHHHHHC-CCE-EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE----
Q ss_conf 52899984784258999-----99986305-975-89997210011110367999999997410035767775899----
Q gi|254780791|r 145 PKIIAVITSPTGAVIRD-----ILQRISCR-FPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII---- 213 (529)
Q Consensus 145 p~~i~vits~~~a~~~D-----~~~~~~~r-~p~-~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii---- 213 (529)
-.|||||.|.=-.-+-| .+..+.+. .+. +|.++.++ |. -||--+++.+-.... ....+||.||
T Consensus 16 ~~rI~IV~s~~n~~I~~~Ll~ga~~~L~~~gi~~~~i~~~~VP--Ga---~EiP~~~~~l~~~~~-~~~~~~D~iI~LG~ 89 (168)
T d1ejba_ 16 KIRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVP--GS---YELPWGTKRFVDRQA-KLGKPLDVVIPIGV 89 (168)
T ss_dssp TCCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECS--SG---GGHHHHHHHHHHHHH-HTTCCCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC--CH---HHHHHHHHHHHHHHH-HHCCCCCEEEEEEE
T ss_conf 8989999710878999999999999999869986674699638--71---688999999998767-40687666988766
Q ss_pred EECCCCCHHHHHHCCH-HHHHHHHHHCCCEEEEEEC
Q ss_conf 9516888444220076-9999999748904885205
Q gi|254780791|r 214 LARGGGSIEDLWHFND-EMIVRAIANSSIPIISAIG 248 (529)
Q Consensus 214 i~RGGGS~eDL~~FN~-e~laraI~~~~iPVisgIG 248 (529)
|+||+=.--|+.|=.- ..|.+.-.+..+||+.||=
T Consensus 90 VIkGeT~H~e~I~~~v~~gl~~lsl~~~~PI~~GVL 125 (168)
T d1ejba_ 90 LIKGSTMHFEYISDSTTHALMNLQEKVDMPVIFGLL 125 (168)
T ss_dssp EECCSSSHHHHHHHHHHHHHHHHHHHHTSCBCCEEE
T ss_pred EECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 761675377899999999999998753997798971
No 192
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=22.70 E-value=8.5 Score=14.28 Aligned_cols=79 Identities=18% Similarity=0.327 Sum_probs=39.7
Q ss_pred CCCCCC-CCCEEEEEEEEEEECCC-------CEEEE---EEEEEEECCCCHHHHHHHHHHHHHHHHHCC--CCCCCCCCC
Q ss_conf 866814-59889999996675288-------43799---999710168007999999999976540122--610016310
Q gi|254780791|r 76 IEFLPE-EGIEFLVIGKITTFPGS-------SKYQI---IIESLIPSGSGTLLTALEKRKKKLLEEGLF--SDQHKNPIP 142 (529)
Q Consensus 76 ~~~~~~-~G~~v~~~g~~~~y~~~-------g~~ql---~v~~i~~~g~G~l~~~~e~lk~~L~~eGlf--d~~~k~~lP 142 (529)
++|.|- ||..+. ..+|+|. |.--+ +.+.|-|...+++-... +..|..+-+= +...-.|-|
T Consensus 114 ~~~~~n~Dg~~~E----P~~~p~~iP~lLvNG~~GIavG~sT~IP~hN~~eii~~~---~~~i~~~~~~~~~L~~~ipgP 186 (493)
T d1ab4a_ 114 VDFVDNYDGTEKI----PDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGC---LAYIDDEDISIEGLMEHIPGP 186 (493)
T ss_dssp SCEEECTTSSSEE----ESSCCCSSCHHHHHCEEECCSSCCEEECCCCHHHHHHHH---HHHHHCTTCCHHHHTTTCCSC
T ss_pred CCCCCCCCCCCCC----CEEECCCCHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHH---HHHHCCCCCCHHHHHHCCCCC
T ss_conf 1575088877046----435544006688762320106666356889989999998---865023334599998348889
Q ss_pred CCCCEEEEEECCCHHHHHHHHH
Q ss_conf 2652899984784258999999
Q gi|254780791|r 143 FIPKIIAVITSPTGAVIRDILQ 164 (529)
Q Consensus 143 ~~p~~i~vits~~~a~~~D~~~ 164 (529)
-||.. ++|++..| +.+...
T Consensus 187 dfP~g-~~~~g~~~--~~~~y~ 205 (493)
T d1ab4a_ 187 DFPTA-AIINGRRG--IEEAYR 205 (493)
T ss_dssp CCSSC-CEECCSHH--HHHHHH
T ss_pred CCCCC-CEEECCCC--HHHHHH
T ss_conf 98885-46877600--899973
No 193
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.67 E-value=14 Score=12.29 Aligned_cols=11 Identities=45% Similarity=0.951 Sum_probs=6.3
Q ss_pred CCCEEEEECCCCC
Q ss_conf 7758999516888
Q gi|254780791|r 208 RPDIIILARGGGS 220 (529)
Q Consensus 208 ~~D~iii~RGGGS 220 (529)
.||+||| |||.
T Consensus 3 ~yDviII--G~Gp 13 (221)
T d3grsa1 3 SYDYLVI--GGGS 13 (221)
T ss_dssp ECSEEEE--CCSH
T ss_pred CCCEEEE--CCCH
T ss_conf 6498998--9799
No 194
>d1l1ja_ b.47.1.1 (A:) Protease Do (DegP, HtrA), catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=22.51 E-value=14 Score=12.35 Aligned_cols=11 Identities=27% Similarity=0.308 Sum_probs=4.9
Q ss_pred CCCCEEEEEEE
Q ss_conf 45988999999
Q gi|254780791|r 81 EEGIEFLVIGK 91 (529)
Q Consensus 81 ~~G~~v~~~g~ 91 (529)
+.|+.|.+.|.
T Consensus 129 ~~G~~V~aiG~ 139 (228)
T d1l1ja_ 129 KIGEWAIAIGN 139 (228)
T ss_dssp CTTCEEEEEEC
T ss_pred CCCCCEEEEEC
T ss_conf 56982799978
No 195
>d2djia1 c.31.1.3 (A:187-363) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=22.46 E-value=14 Score=12.25 Aligned_cols=18 Identities=11% Similarity=0.108 Sum_probs=6.3
Q ss_pred HHHHHHHCCCEEEEEECCCC
Q ss_conf 99999748904885205777
Q gi|254780791|r 232 IVRAIANSSIPIISAIGHET 251 (529)
Q Consensus 232 laraI~~~~iPVisgIGHE~ 251 (529)
..+++-+|.+ |-+||...
T Consensus 79 ~~~~l~~aDl--vi~lG~~~ 96 (177)
T d2djia1 79 ANETILEADT--VLFAGSNF 96 (177)
T ss_dssp HHHHHHHCSE--EEEESCCC
T ss_pred HHHHHHCCCC--EEEEECCC
T ss_conf 4213314674--58850257
No 196
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=22.29 E-value=14 Score=12.23 Aligned_cols=84 Identities=21% Similarity=0.301 Sum_probs=50.1
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH--
Q ss_conf 289998478425899999986305975899972100111103679999999974100357677758999516888444--
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED-- 223 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eD-- 223 (529)
|||-||- +...+.+++..+=+.+++++.... +-..|++.+.. ..||+||+ |
T Consensus 1 KkILiVD--D~~~~~~~l~~~L~~~g~~v~~a~----------~~~~al~~l~~-------~~~dlil~--------D~~ 53 (121)
T d1zesa1 1 RRILVVE--DEAPIREMVCFVLEQNGFQPVEAE----------DYDSAVNQLNE-------PWPDLILL--------DWM 53 (121)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEEEC----------SHHHHHHHSSS-------SCCSEEEE--------CSS
T ss_pred CEEEEEE--CCHHHHHHHHHHHHHCCCEEEEEC----------CHHHHHHHHHC-------CCCCEEEE--------ECC
T ss_conf 9899996--899999999999998799999987----------85999999971-------58878974--------057
Q ss_pred HHHCCHHHHHHHHHH----CCCEEEEEECCCCCCHHH
Q ss_conf 220076999999974----890488520577752589
Q gi|254780791|r 224 LWHFNDEMIVRAIAN----SSIPIISAIGHETDWTLA 256 (529)
Q Consensus 224 L~~FN~e~laraI~~----~~iPVisgIGHE~D~Tl~ 256 (529)
|=..|-.++++.|-+ ..+|||-=-||..+....
T Consensus 54 mp~~~G~~l~~~lr~~~~~~~~pvi~lt~~~~~~~~~ 90 (121)
T d1zesa1 54 LPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRV 90 (121)
T ss_dssp CTTSCHHHHHHHHHHSTTTTTSCEEEEESCCSHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHH
T ss_conf 8999799999999847667999299998879999999
No 197
>d2hmfa1 c.73.1.3 (A:2-303) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=22.10 E-value=14 Score=12.20 Aligned_cols=40 Identities=15% Similarity=0.229 Sum_probs=25.4
Q ss_pred ECCCCCHHHHHHCCH--HHHHHHHHH--CCCEEEEEECCCCCCH
Q ss_conf 516888444220076--999999974--8904885205777525
Q gi|254780791|r 215 ARGGGSIEDLWHFND--EMIVRAIAN--SSIPIISAIGHETDWT 254 (529)
Q Consensus 215 ~RGGGS~eDL~~FN~--e~laraI~~--~~iPVisgIGHE~D~T 254 (529)
==||=|+.|--+|.. +.+...... -.+=|+||.|=-||.-
T Consensus 5 KFGGTSvadae~i~~V~~II~~~~~~~~~~vVVVSA~ggvTn~L 48 (302)
T d2hmfa1 5 KFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNAL 48 (302)
T ss_dssp EECTGGGSSHHHHHHHHHHHHHHHHHCSCEEEEECCCTTHHHHH
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
T ss_conf 96830278899999999999878756998899970999971299
No 198
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=22.07 E-value=14 Score=12.19 Aligned_cols=87 Identities=20% Similarity=0.301 Sum_probs=49.5
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHH
Q ss_conf 28999847842589999998630597589997210011110367999999997410035767775899951688844422
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~ 225 (529)
+||-||- +...+++.++.+=..+++++.- +.-.| ..|++.+... .||+|++ |+.
T Consensus 2 krILivD--D~~~~~~~l~~~L~~~g~~v~~--~a~~~-------~~al~~~~~~-------~~dliil--------D~~ 55 (118)
T d1u0sy_ 2 KRVLIVD--DAAFMRMMLKDIITKAGYEVAG--EATNG-------REAVEKYKEL-------KPDIVTM--------DIT 55 (118)
T ss_dssp CEEEEEC--SCHHHHHHHHHHHHHTTCEEEE--EESSH-------HHHHHHHHHH-------CCSEEEE--------ECS
T ss_pred CEEEEEE--CCHHHHHHHHHHHHHCCCCEEE--EECCH-------HHHHHHHHHC-------CCCEEEE--------ECC
T ss_conf 9999996--9899999999999976996699--98899-------9999999835-------6889998--------458
Q ss_pred --HCCHHHHHHHHH--HCCCEEEEEECCCCCCHHHHH
Q ss_conf --007699999997--489048852057775258988
Q gi|254780791|r 226 --HFNDEMIVRAIA--NSSIPIISAIGHETDWTLADY 258 (529)
Q Consensus 226 --~FN~e~laraI~--~~~iPVisgIGHE~D~Tl~D~ 258 (529)
..|-.++++.|- ...+|||-=-||..+....+.
T Consensus 56 mp~~~G~e~~~~ir~~~~~~pvi~ls~~~~~~~~~~a 92 (118)
T d1u0sy_ 56 MPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEA 92 (118)
T ss_dssp CGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
T ss_conf 9999789999999975989968999832899999999
No 199
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=21.95 E-value=14 Score=12.39 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=39.2
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCC-----------CCC-CCCCCEE
Q ss_conf 28999847842589999998630597-5899972100111103679999999974100-----------357-6777589
Q gi|254780791|r 146 KIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKE-----------GRT-CPRPDII 212 (529)
Q Consensus 146 ~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~-----------~~~-~~~~D~i 212 (529)
++|-=|-+-+|. ++..+.++|| ++++++..+- .+..|-+.+..... ..+ -..+|++
T Consensus 83 ~~vlDvG~G~G~----~~~~l~~~~P~~~~~~~Dlp~-------~~~~a~~~~~~~~~~~ri~~~~~d~~~~~p~~~D~v 151 (256)
T d1qzza2 83 RHVLDVGGGNGG----MLAAIALRAPHLRGTLVELAG-------PAERARRRFADAGLADRVTVAEGDFFKPLPVTADVV 151 (256)
T ss_dssp CEEEEETCTTSH----HHHHHHHHCTTCEEEEEECHH-------HHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEE
T ss_pred CEEEEECCCCCH----HHHHHHHHHCCCEEEEECCHH-------HHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHH
T ss_conf 879997898978----999999862585799934828-------889999987641776504664200123466643012
Q ss_pred EEECCCCCHHHHHHCCHHHH---HHHHHHCCCE
Q ss_conf 99516888444220076999---9999748904
Q gi|254780791|r 213 ILARGGGSIEDLWHFNDEMI---VRAIANSSIP 242 (529)
Q Consensus 213 ii~RGGGS~eDL~~FN~e~l---araI~~~~iP 242 (529)
++..- |..|+++.. .+.|+..=-|
T Consensus 152 ~~~~v------Lh~~~d~~~~~lL~~i~~~Lkp 178 (256)
T d1qzza2 152 LLSFV------LLNWSDEDALTILRGCVRALEP 178 (256)
T ss_dssp EEESC------GGGSCHHHHHHHHHHHHHHEEE
T ss_pred HCCCC------CCCCCCHHHHHHHHHHHHHCCC
T ss_conf 11442------0125737777999999863588
No 200
>d1edqa1 b.1.18.2 (A:24-132) Chitinase A, N-terminal domain N {Serratia marcescens [TaxId: 615]}
Probab=21.78 E-value=15 Score=12.15 Aligned_cols=48 Identities=17% Similarity=0.271 Sum_probs=27.2
Q ss_pred EEEEEECCCCCCCCCCCCCCCEEEEEE-------EEEE-ECCCCEEEEEEEEEEECC
Q ss_conf 999997352105866814598899999-------9667-528843799999710168
Q gi|254780791|r 64 IDAIIWKGTLNKIEFLPEEGIEFLVIG-------KITT-FPGSSKYQIIIESLIPSG 112 (529)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~G~~v~~~g-------~~~~-y~~~g~~ql~v~~i~~~g 112 (529)
++--||.+.....-.-..||.+|- .| .++| +.+.|+|++.|+-+.-.|
T Consensus 41 VswN~WsG~~Gd~~~v~~dg~~V~-~g~~~~~~~~a~f~v~kgG~y~m~V~LcN~~G 96 (109)
T d1edqa1 41 VSWNLWNGDTGTTAKVLLNGKEAW-SGPSTGSSGTANFKVNKGGRYQMQVALCNADG 96 (109)
T ss_dssp EEEECCSSCCCSEEEEEETTEEEE-EEECCSSEEEEEEEECSCEEEEEEEEEEETTE
T ss_pred EEEEEECCCCCCEEEEEECCEEEE-ECCCCCCCEEEEEEECCCCEEEEEEEEECCCC
T ss_conf 999876598885899999999998-64687673089999668988999999985999
No 201
>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.74 E-value=15 Score=12.14 Aligned_cols=45 Identities=20% Similarity=0.212 Sum_probs=24.1
Q ss_pred HHHHHHHHHHCCCE-EEEEE----ECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 99999986305975-89997----210011110367999999997410035767775899
Q gi|254780791|r 159 IRDILQRISCRFPL-RVIIF----PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 (529)
Q Consensus 159 ~~D~~~~~~~r~p~-~~~~~----p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~ii 213 (529)
...|-+.|..--++ .+.+- -+.|.|.-.+..|+++|+.+ .||+++
T Consensus 20 ~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~----------G~~A~l 69 (72)
T d1qupa2 20 VNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNC----------GKDAII 69 (72)
T ss_dssp HHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHT----------TCCCEE
T ss_pred HHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHH----------CCCEEE
T ss_conf 99999998669980499998889999997548999999999974----------998898
No 202
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.66 E-value=15 Score=12.13 Aligned_cols=95 Identities=18% Similarity=0.150 Sum_probs=58.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCC-CEEEEEEECCCCCCCHHHHH
Q ss_conf 80079999999999765401226100163102652899984784258999999863059-75899972100111103679
Q gi|254780791|r 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190 (529)
Q Consensus 112 g~G~l~~~~e~lk~~L~~eGlfd~~~k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~-p~~~~~~p~~vQG~~a~~~i 190 (529)
|+|. .+-++|.++|+- - |+++.+...+......++... +..+..+.+=|==++. +
T Consensus 21 GIG~------aiA~~la~~G~~-V--------------v~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~---v 76 (257)
T d1xg5a_ 21 GIGA------AVARALVQQGLK-V--------------VGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEED---I 76 (257)
T ss_dssp HHHH------HHHHHHHHTTCE-E--------------EEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHH---H
T ss_pred HHHH------HHHHHHHHCCCE-E--------------EEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH---H
T ss_conf 8999------999999987999-9--------------99979889999999999856999529999745899999---9
Q ss_pred HHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHHHHH
Q ss_conf 999999974100357677758999516888444220076999999
Q gi|254780791|r 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 (529)
Q Consensus 191 ~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~lara 235 (529)
-+.++.+... ...+|++|-.=|++...++|.+.++..-+.
T Consensus 77 ~~~v~~~~~~-----~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~ 116 (257)
T d1xg5a_ 77 LSMFSAIRSQ-----HSGVDICINNAGLARPDTLLSGSTSGWKDM 116 (257)
T ss_dssp HHHHHHHHHH-----HCCCSEEEECCCCCCCCCTTTCCHHHHHHH
T ss_pred HHHHHHHHHH-----CCCCCEEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 9999999984-----688787876353467776001657788751
No 203
>d2ez9a1 c.31.1.3 (A:183-365) Pyruvate oxidase {Lactobacillus plantarum [TaxId: 1590]}
Probab=21.53 E-value=15 Score=12.11 Aligned_cols=84 Identities=17% Similarity=0.298 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH------
Q ss_conf 842589999998630-5975899972100111103679999999974100357677758999516888444220------
Q gi|254780791|r 154 PTGAVIRDILQRISC-RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH------ 226 (529)
Q Consensus 154 ~~~a~~~D~~~~~~~-r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~------ 226 (529)
|+...+..+...|.. ..| +++...-| ..|..++.+= +...+ .-|+--.+|-|.+-+=-+
T Consensus 15 pd~~~i~~~~~~L~~A~rP--vii~G~G~--~~a~~~l~~l---ae~~~-------~Pv~tt~~~~g~~~~~hp~~~G~~ 80 (183)
T d2ez9a1 15 PDVQAVTRLTQTLLAAERP--LIYYGIGA--RKAGKELEQL---SKTLK-------IPLMSTYPAKGIVADRYPAYLGSA 80 (183)
T ss_dssp CCHHHHHHHHHHHHHCSSE--EEEECGGG--TTCHHHHHHH---HHHHT-------CCEEECGGGTTSSCTTCTTBCCCC
T ss_pred CCHHHHHHHHHHHHHCCCE--EEEECCCC--CCCHHHHHHH---HHCCC-------EEEEEECCCCCCCCCCCCCCCCCC
T ss_conf 8999999999999837993--99983780--6354999987---64043-------379862145544323476433332
Q ss_pred --CCHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf --076999999974890488520577752
Q gi|254780791|r 227 --FNDEMIVRAIANSSIPIISAIGHETDW 253 (529)
Q Consensus 227 --FN~e~laraI~~~~iPVisgIGHE~D~ 253 (529)
+-......++-+|.+ |-+||..-|+
T Consensus 81 G~~~~~~~~~~i~~aDl--il~vG~~l~~ 107 (183)
T d2ez9a1 81 NRVAQKPANEALAQADV--VLFVGNNYPF 107 (183)
T ss_dssp SSSSCHHHHHHHHHCSE--EEEESCCCTT
T ss_pred CCCCCHHHHHHHHCCCC--EEEEECCCCC
T ss_conf 23466777766624674--5886214675
No 204
>d2csua2 c.23.4.1 (A:130-290) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.39 E-value=15 Score=12.09 Aligned_cols=92 Identities=15% Similarity=0.214 Sum_probs=54.3
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHC-CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE-ECCCCCHH
Q ss_conf 5289998478425899999986305-975899972100111103679999999974100357677758999-51688844
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL-ARGGGSIE 222 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r-~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii-~RGGGS~e 222 (529)
|-+||+||-. |+--..++..+.++ +++... +. =|..+--+....|+.+.... ...+|++ +=|+|..+
T Consensus 20 ~G~valiSqS-G~l~~~~~~~~~~~g~G~s~~---vs-~Gn~~~~~~~d~l~~l~~D~------~t~~i~l~~E~~~~~~ 88 (161)
T d2csua2 20 KGNVAFISQS-GALGAGIVYKTIKEDIGFSKF---IS-VGNMADVDFAELMEYLADTE------EDKAIALYIEGVRNGK 88 (161)
T ss_dssp ECSEEEEESC-HHHHHHHHHHHHHTTCEESEE---EE-CTTCCSSCHHHHHHHHTTCS------SCCEEEEEESCCSCHH
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHCCCCEEEE---EE-CCCCCCCCHHHHHHHHHCCC------CCCEEEEEECCCCCHH
T ss_conf 9999999787-899999999998579972599---94-59850168999999973479------9857899722785999
Q ss_pred HHHHCCHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 4220076999999974890488520577752
Q gi|254780791|r 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 (529)
Q Consensus 223 DL~~FN~e~laraI~~~~iPVisgIGHE~D~ 253 (529)
.+ -..+|+....+ |||.-...-++.
T Consensus 89 ~f-----~~~~r~~~~~K-pvv~~k~G~s~~ 113 (161)
T d2csua2 89 KF-----MEVAKRVTKKK-PIIALKAGKSES 113 (161)
T ss_dssp HH-----HHHHHHHHHHS-CEEEEECC----
T ss_pred HH-----HHHHHHHHCCC-CEEEEEEECCCC
T ss_conf 99-----99998875258-705887403410
No 205
>d1vr6a1 c.1.10.4 (A:1-338) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Thermotoga maritima [TaxId: 2336]}
Probab=21.36 E-value=15 Score=12.08 Aligned_cols=166 Identities=16% Similarity=0.209 Sum_probs=84.4
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHH---HHHHHHCCCCCCC
Q ss_conf 4799999735210586681459889999996675288437999997101680079999999999---7654012261001
Q gi|254780791|r 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK---KLLEEGLFSDQHK 138 (529)
Q Consensus 62 a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~~~g~G~l~~~~e~lk~---~L~~eGlfd~~~k 138 (529)
+.-+++--...++.....-+..+.++-.|.+. +. .+.+.++.--+-..+.-.++.--+.+|+ ++-..|.|.+
T Consensus 58 ~Ve~v~~i~~pykl~SR~~~~~~t~I~v~gv~-iG-~~~l~lIAGPC~vES~e~~~~~A~~lke~g~~~~r~g~fKp--- 132 (338)
T d1vr6a1 58 CVESVVRVLKPYKLVSREFHPEDTVIDLGDVK-IG-NGYFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKP--- 132 (338)
T ss_dssp TEEEEEECSCSCCTTBTTTCCSCCCEECSSCE-ES-TTEEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCC---
T ss_pred CCEEEEECCCCHHHHHCCCCCCCCEEEECCEE-EC-CCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECC---
T ss_conf 63278754886556527147888649868989-88-97558995578999899999999998871844023412213---
Q ss_pred CCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEE-------------------E-------------------ECC
Q ss_conf 63102652899984784258999999863059758999-------------------7-------------------210
Q gi|254780791|r 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVII-------------------F-------------------PVK 180 (529)
Q Consensus 139 ~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~-------------------~-------------------p~~ 180 (529)
+.-|.-.+- ..-.++ +++..+++.|++.++. . |+.
T Consensus 133 Rtsp~sf~g------~g~~gL-~~l~~~k~~~glpvvTdV~~~~~~~~~~e~~DilQI~A~~~~n~~LL~~~g~t~kpV~ 205 (338)
T d1vr6a1 133 RTSPYSFQG------LGEKGL-EYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVL 205 (338)
T ss_dssp CCSTTSCCC------CTHHHH-HHHHHHHHHHTCEEEEECSSGGGHHHHHHHCSEEEECGGGTTCHHHHHHHHTTCSCEE
T ss_pred CCCCCCCCC------CHHHHH-HHHHHHHHHCCCEEEEECCCHHHHHHHHCEEEEEEECHHHCCCHHHHHHHHCCCCCEE
T ss_conf 333433356------538789-9888777415940687405213456542411268955022267899997523577379
Q ss_pred C-CC-CCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC----CCCH---HHHHHCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 0-11-1103679999999974100357677758999516----8884---44220076999999974890488520577
Q gi|254780791|r 181 V-QG-DECPKEIANAILQLNTLKEGRTCPRPDIIILARG----GGSI---EDLWHFNDEMIVRAIANSSIPIISAIGHE 250 (529)
Q Consensus 181 v-QG-~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RG----GGS~---eDL~~FN~e~laraI~~~~iPVisgIGHE 250 (529)
+ -| -.++.++..|.+++.... +.++++.=|| .|+. -|+|++ .+.+ -.+-+|||.-.-|-
T Consensus 206 lKkG~~~s~~e~l~aae~i~~~G------n~~vilcERG~~t~~~~~~~~lD~~~i---~~~k--~~~~lPVi~DpsHs 273 (338)
T d1vr6a1 206 LKRGFMNTIEEFLLSAEYIANSG------NTKIILCERGIRTFEKATRNTLDISAV---PIIR--KESHLPILVDPSHS 273 (338)
T ss_dssp EECCTTCCHHHHHHHHHHHHHTT------CCCEEEEECCBCCSCCSSSSBCCTTHH---HHHH--HHBSSCEEECHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHHCC------CCCCEEEECCCCCCCCCCCCCHHHCCC---CEEE--CCCCCCEEECCCCC
T ss_conf 62754432455456689987158------864246531422235432412665043---3000--23567604178877
No 206
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=21.07 E-value=15 Score=12.04 Aligned_cols=144 Identities=17% Similarity=0.210 Sum_probs=78.4
Q ss_pred EEEEEEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC--CCCCCCCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 9996675288437999997101680079999999999765401226100--16310265289998478425899999986
Q gi|254780791|r 89 IGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH--KNPIPFIPKIIAVITSPTGAVIRDILQRI 166 (529)
Q Consensus 89 ~g~~~~y~~~g~~ql~v~~i~~~g~G~l~~~~e~lk~~L~~eGlfd~~~--k~~lP~~p~~i~vits~~~a~~~D~~~~~ 166 (529)
..++++++..+++.+.+.-+.+.... ..|..-|+..... -+.+=..|.-+-+||+|+|.|--=.+..+
T Consensus 109 ~~Rv~~~p~~~g~~~vlRl~~~~~~~----------~~l~~LG~~~~~~~~l~~l~~~~~GliLvtGpTGSGKSTTl~~~ 178 (401)
T d1p9ra_ 109 DVRVSTMPSSHGERVVMRLLDKNATR----------LDLHSLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAG 178 (401)
T ss_dssp EEEEEEECCTTSCEEEECCEETTTTC----------CCGGGSCCCHHHHHHHHHHHTSSSEEEEEECSTTSCHHHHHHHH
T ss_pred EEEEEEECCHHHHHHHHHHHCCCCCC----------HHHHHHCCCHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHH
T ss_conf 87544422023445665431123320----------01443013577789999998641054898767877744779998
Q ss_pred HH---CCCEEEEE--------EE----CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHH
Q ss_conf 30---59758999--------72----10011110367999999997410035767775899951688844422007699
Q gi|254780791|r 167 SC---RFPLRVII--------FP----VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 (529)
Q Consensus 167 ~~---r~p~~~~~--------~p----~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~ 231 (529)
-+ +...+|+- +| ..|.+ ....+-..+|+.+-+.+ ||+|+|+ =+-|. ..-.
T Consensus 179 l~~~~~~~~~i~tiEdPiE~~~~~~~q~~v~~-~~~~~~~~~l~~~lR~d-------PDvi~ig----EiRd~---~ta~ 243 (401)
T d1p9ra_ 179 LQELNSSERNILTVEDPIEFDIDGIGQTQVNP-RVDMTFARGLRAILRQD-------PDVVMVG----EIRDL---ETAQ 243 (401)
T ss_dssp HHHHCCTTSCEEEEESSCCSCCSSSEEEECBG-GGTBCHHHHHHHHGGGC-------CSEEEES----CCCSH---HHHH
T ss_pred HHHHCCCCCEEEEECCCCCCCCCCCCEEEECC-CCCCCHHHHHHHHHHHC-------CCEEEEC----CCCCH---HHHH
T ss_conf 66625787469996267434567887026558-76779999999998413-------8889845----76875---9999
Q ss_pred HHHHHHHCCCEEEEEECCCCCCHHHH
Q ss_conf 99999748904885205777525898
Q gi|254780791|r 232 IVRAIANSSIPIISAIGHETDWTLAD 257 (529)
Q Consensus 232 laraI~~~~iPVisgIGHE~D~Tl~D 257 (529)
.|-..+.+-..|+|.+==..=..+++
T Consensus 244 ~a~~aa~tGhlV~tTlHa~~a~~~~~ 269 (401)
T d1p9ra_ 244 IAVQASLTGHLVMSTLHTNTAVGAVT 269 (401)
T ss_dssp HHHHHHHTTCEEEEEECCSSSHHHHH
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHH
T ss_conf 99999724985899833676676654
No 207
>d2ix0a1 b.40.4.5 (A:83-172) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=20.69 E-value=15 Score=11.98 Aligned_cols=58 Identities=10% Similarity=-0.038 Sum_probs=30.4
Q ss_pred EEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEEECC
Q ss_conf 2799987489479999973521058668145988999999667528843799999710168
Q gi|254780791|r 52 HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 (529)
Q Consensus 52 H~Yf~lkd~~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i~~~g 112 (529)
..+|-.-|+. +|+--+|-.......-..++|++|+| +++-|+.++...+..+-++.-|
T Consensus 13 ~~~fVvPd~~-ri~~~I~I~~~~~~~~~ak~Gd~Vvv--ei~~~P~~~~~~~~g~I~evlG 70 (90)
T d2ix0a1 13 DRLAIVPDHP-LLKDAIPCRAARGLNHEFKEGDWAVA--EMRRHPLKGDRSFYAELTQYIT 70 (90)
T ss_dssp SSEEEEESCT-TCCSCEEEEECTTCCCCCCTTCEEEE--EEEECGGGTCSSCEEEEEEECC
T ss_pred CEEEEEECCC-CCCCCCCCCCCCCCCCCCCCCCEEEE--EEEECCCCCCCCCEEEEEEEEE
T ss_conf 9899985998-53664412643244556789979999--9976887789986589989873
No 208
>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.55 E-value=15 Score=11.95 Aligned_cols=26 Identities=8% Similarity=0.294 Sum_probs=14.4
Q ss_pred CCEEEEECCCCCHHHHHHCCHHHHHHHHHH
Q ss_conf 758999516888444220076999999974
Q gi|254780791|r 209 PDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 (529)
Q Consensus 209 ~D~iii~RGGGS~eDL~~FN~e~laraI~~ 238 (529)
.|.+|++++++ .++|.-..|+++...
T Consensus 183 ~d~~vm~~~~a----~i~~aGP~vV~~~~g 208 (258)
T d2a7sa1 183 TDFVIMVDQTS----QMFITGPDVIKTVTG 208 (258)
T ss_dssp SSEEEEEBTTB----BCBSSCHHHHHHHHC
T ss_pred CCCEEEECCCE----EEECCCHHHHHHHCC
T ss_conf 50017614735----787168367887428
No 209
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.54 E-value=15 Score=11.95 Aligned_cols=84 Identities=10% Similarity=0.148 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHCCCEEEEEEECC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCHHHH
Q ss_conf 842589999998630597589997210-0111103679999999974100357677758999516888444220076999
Q gi|254780791|r 154 PTGAVIRDILQRISCRFPLRVIIFPVK-VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 (529)
Q Consensus 154 ~~~a~~~D~~~~~~~r~p~~~~~~p~~-vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eDL~~FN~e~l 232 (529)
++-..+-++.+.+.+.-++.|++|..+ .-|..-..+++..|... +-++-|==..| |-+.+
T Consensus 116 ~~~~~l~~~~~~v~~~~~~pi~lYn~p~~~g~~~~~~~~~~L~~~-----------p~i~giK~~s~--------d~~~~ 176 (296)
T d1xxxa1 116 PPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASH-----------PNIVGVKDAKA--------DLHSG 176 (296)
T ss_dssp CCHHHHHHHHHHHHTTCSSCEEEEECHHHHSSCCCHHHHHHHHTS-----------TTEEEEEECSC--------CHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCC-----------CCEEEECCCCC--------CHHHH
T ss_conf 899999999999997259978999786424777778899985579-----------99614313643--------49998
Q ss_pred HHHHHHCCCEEEEEECCCCCCHHHHHHH
Q ss_conf 9999748904885205777525898864
Q gi|254780791|r 233 VRAIANSSIPIISAIGHETDWTLADYAA 260 (529)
Q Consensus 233 araI~~~~iPVisgIGHE~D~Tl~D~VA 260 (529)
.+.+....+-+++| ++ ..+.++..
T Consensus 177 ~~~~~~~~~~~~~g--~~--~~~~~~~~ 200 (296)
T d1xxxa1 177 AQIMADTGLAYYSG--DD--ALNLPWLA 200 (296)
T ss_dssp HHHHHHHCCEEEEC--SG--GGHHHHHH
T ss_pred HHHHCCCCCCCCCC--CC--CCCCHHHH
T ss_conf 76511366430167--53--11124554
No 210
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=20.53 E-value=15 Score=11.95 Aligned_cols=90 Identities=10% Similarity=-0.005 Sum_probs=45.4
Q ss_pred CEEEEEECCCHH-HHHHHHHHHHH---CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCH
Q ss_conf 289998478425-89999998630---59758999721001111036799999999741003576777589995168884
Q gi|254780791|r 146 KIIAVITSPTGA-VIRDILQRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 (529)
Q Consensus 146 ~~i~vits~~~a-~~~D~~~~~~~---r~p~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~ 221 (529)
++||+|.+..+- -+..+.+-+++ .+.+++.++.. +++.+..-+++|+.+-.. ++|.||+.=....
T Consensus 4 ~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~v~~~~~---~~~d~~~q~~~i~~~i~~-------~~dgIIi~~~~~~- 72 (316)
T d1tjya_ 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGP---TEPSVSGQVQLVNNFVNQ-------GYDAIIVSAVSPD- 72 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTCEEEECCC---SSCCHHHHHHHHHHHHHT-------TCSEEEECCSSSS-
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC---CCCCHHHHHHHHHHHHHC-------CCCEEEECCCCCC-
T ss_conf 89999938999989999999999999981997999979---999999999999999965-------9986641144320-
Q ss_pred HHHHHCCHHHHHHHHHHCCCEEEEEECCCCC
Q ss_conf 4422007699999997489048852057775
Q gi|254780791|r 222 EDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 (529)
Q Consensus 222 eDL~~FN~e~laraI~~~~iPVisgIGHE~D 252 (529)
......+......|||++-...-.+
T Consensus 73 ------~~~~~~~~a~~~gi~vv~~d~~~~~ 97 (316)
T d1tjya_ 73 ------GLCPALKRAMQRGVKILTWDSDTKP 97 (316)
T ss_dssp ------TTHHHHHHHHHTTCEEEEESSCCCG
T ss_pred ------HHHHHHHHHHCCCCCCEECCCCCCC
T ss_conf ------1245566542146541111453322
No 211
>d2btoa1 c.32.1.1 (A:3-246) Tubulin alpha-subunit {Prosthecobacter dejongeii [TaxId: 48465]}
Probab=20.33 E-value=16 Score=11.92 Aligned_cols=71 Identities=21% Similarity=0.392 Sum_probs=44.8
Q ss_pred EEEEEE---CCCHHHHHHHH-HHHHHCCC-E---EEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCC
Q ss_conf 899984---78425899999-98630597-5---8999721001111036799999999741003576777589995168
Q gi|254780791|r 147 IIAVIT---SPTGAVIRDIL-QRISCRFP-L---RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218 (529)
Q Consensus 147 ~i~vit---s~~~a~~~D~~-~~~~~r~p-~---~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGG 218 (529)
-+-++. .-||.++.-.+ ..|++.|| . .+.+||.+-.|+ ..-+.=+++-.+..+.+ ..|.+++
T Consensus 134 gf~i~hSl~GGTGSGlgs~l~e~l~d~yp~~~~~~~~V~P~~~~~~-~vvqpYNsiLsl~~L~e-----~sD~~~~---- 203 (244)
T d2btoa1 134 GIIVLHAIGGGTGSGFGALLIESLKEKYGEIPVLSCAVLPSPQVSS-VVTEPYNTVFALNTLRR-----SADACLI---- 203 (244)
T ss_dssp EEEEEEESSSSHHHHHHHHHHHHHHHHTCSSCEEEEEEECCCCSSC-EESHHHHHHHHHHHHHH-----TCSEEEE----
T ss_pred CEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCC-CCCCCCHHHHHHHHHHH-----CCCEEEE----
T ss_conf 5357644023555321467889988871673378788985487786-00113298998999985-----0966999----
Q ss_pred CCHHHHHHCCHHHHHHH
Q ss_conf 88444220076999999
Q gi|254780791|r 219 GSIEDLWHFNDEMIVRA 235 (529)
Q Consensus 219 GS~eDL~~FN~e~lara 235 (529)
|+.+.|-+-
T Consensus 204 --------~dN~al~~i 212 (244)
T d2btoa1 204 --------FDNEALFDL 212 (244)
T ss_dssp --------EEHHHHHHH
T ss_pred --------EEHHHHHHH
T ss_conf --------426999999
No 212
>d1wfya_ d.15.1.5 (A:) Regulator of G-protein signaling 14, RGS14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.31 E-value=5.2 Score=16.20 Aligned_cols=52 Identities=15% Similarity=0.303 Sum_probs=37.3
Q ss_pred CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHH
Q ss_conf 16310265289998478425899999986305975899972100111103679
Q gi|254780791|r 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 (529)
Q Consensus 138 k~~lP~~p~~i~vits~~~a~~~D~~~~~~~r~p~~~~~~p~~vQG~~a~~~i 190 (529)
+..||...+.|+|..-++- -++|+++-+-..|.++....-+.+.|+..+-++
T Consensus 20 ~LdLp~~~k~I~VkaKptK-~l~EvLrpIL~KYgl~l~~v~v~~~ge~~~LDl 71 (104)
T d1wfya_ 20 QLELVGLERVVRISAKPTK-RLQEALQPILAKHGLSLDQVVLHRPGEKQPMDL 71 (104)
T ss_dssp EEEESSSSSEEEEEECSSS-BTTTTTHHHHTTTTCCTTTCCBCCTTCSSCCCT
T ss_pred EEECCCCCCEEEEEECCCC-CHHHHHHHHHHHHCCCHHHEEEEECCCCCCCCC
T ss_conf 9873787757899827998-399999999998087834769995799653347
No 213
>d1j6qa_ b.40.9.1 (A:) Heme chaperone CcmE {Shewanella putrefaciens [TaxId: 24]}
Probab=20.15 E-value=16 Score=11.89 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=43.0
Q ss_pred CCEEEEEEECC--CCCCCCCC-EEEEEEECC-CCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEE
Q ss_conf 71899999705--43568886-279998748-947999997352105866814598899999966752884379999971
Q gi|254780791|r 33 SHVCVRGEISG--YRGIHSSG-HAYFSLKDN-HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL 108 (529)
Q Consensus 33 ~~~~v~gEis~--~~~~~~sG-H~Yf~lkd~-~a~i~~~~~~~~~~~~~~~~~~G~~v~~~g~~~~y~~~g~~ql~v~~i 108 (529)
..+.|-|-|-. +. +...| .+-|.+.|. ++.|.. .|.+ -++-..++|..|++.|++. +.|. |.++.|
T Consensus 27 ~~iRvGG~V~~gSi~-~~~~~~~~~F~itD~~~~~i~V-~Y~G---~lPdlF~eg~gVVveG~~~---~~g~--F~A~~v 96 (100)
T d1j6qa_ 27 QRIRVGGMVTVGSMV-RDPNSLHVQFAVHDSLGGEILV-TYDD---LLPDLFREGQGIVAQGVLG---EDGK--LAATEV 96 (100)
T ss_dssp CEEEEEEEECTTCCE-ECTTSSCEEEEEECTTCCCEEE-EECS---CCTTSCCSSSEEEEEEEEC---STTS--EEEEEE
T ss_pred CEEEEEEEEEEEEEE-ECCCCCEEEEEECCCCEEEEEE-EECC---CCCCHHCCCCEEEEEEEEC---CCCE--EEEEEE
T ss_conf 789985699633798-4378518999976776059999-8679---8970003798299999988---9998--999998
No 214
>d1a04a2 c.23.1.1 (A:5-142) Nitrate/nitrite response regulator (NarL), receiver domain {Escherichia coli [TaxId: 562]}
Probab=20.09 E-value=16 Score=11.88 Aligned_cols=82 Identities=21% Similarity=0.308 Sum_probs=43.8
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHH
Q ss_conf 528999847842589999998630597-5899972100111103679999999974100357677758999516888444
Q gi|254780791|r 145 PKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 (529)
Q Consensus 145 p~~i~vits~~~a~~~D~~~~~~~r~p-~~~~~~p~~vQG~~a~~~i~~ai~~~~~~~~~~~~~~~D~iii~RGGGS~eD 223 (529)
|-||-||-- -..+++.++.+=+.++ +.+ ....- +-..|++.+... .||+|++== .
T Consensus 2 Pi~VLiVDD--~~~~r~~l~~~L~~~~~~~~--v~~a~-------~~~~al~~~~~~-------~~DlvllD~------~ 57 (138)
T d1a04a2 2 PATILLIDD--HPMLRTGVKQLISMAPDITV--VGEAS-------NGEQGIELAESL-------DPDLILLDL------N 57 (138)
T ss_dssp CEEEEEECS--CHHHHHHHHHHHTTCTTEEE--EEEES-------SHHHHHHHHHHH-------CCSEEEEET------T
T ss_pred CCEEEEECC--CHHHHHHHHHHHHHCCCCEE--EEEEC-------CHHHHHHHHHHC-------CCCEEEEEC------C
T ss_conf 998999889--99999999999985899579--99979-------999999999856-------997999865------7
Q ss_pred HHHCCHHHHHHHHHH----CCCEEEEEECCC
Q ss_conf 220076999999974----890488520577
Q gi|254780791|r 224 LWHFNDEMIVRAIAN----SSIPIISAIGHE 250 (529)
Q Consensus 224 L~~FN~e~laraI~~----~~iPVisgIGHE 250 (529)
|-..|-.++++.|-+ ++++|+|+-+++
T Consensus 58 mP~~~G~el~~~ir~~~~~~~vivlt~~~~~ 88 (138)
T d1a04a2 58 MPGMNGLETLDKLREKSLSGRIVVFSVSNHE 88 (138)
T ss_dssp STTSCHHHHHHHHHHSCCCSEEEEEECCCCH
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEEEECCH
T ss_conf 8999889999999953999988999987899
Done!