BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780791|ref|YP_003065204.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter asiaticus str. psy62] (529 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|241207230|ref|YP_002978326.1| exodeoxyribonuclease VII large subunit [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861120|gb|ACS58787.1| exodeoxyribonuclease VII, large subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 526 Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats. Identities = 240/526 (45%), Positives = 328/526 (62%), Gaps = 4/526 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F + + EYSVSELS +K VE+ V VRGEISGYRG HSSGHAYF+LKD+ +R Sbjct: 5 FDGDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRAR 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ +E+R Sbjct: 65 IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF K +PF+P +I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG Sbjct: 125 KRKLGAEGLFDAARKKRLPFMPGVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +E+ANAI N L+ PRPD++I+ARGGGS+EDLW FNDE++VRA A S IP+ Sbjct: 185 EGSGEEVANAIRGFNALEPSGAIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L ARL + R + + Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMDQR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 ++ +L++ALP+ DQ L+ R R D L LE+ K R F + ++ D L Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAATGLGRGLELNTINKRRGFERVAAHLRPDLLA 364 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + RQ + E+ E++V++ + AIL L + K + + L Sbjct: 365 GRIAERRQTLNERMARAERMVERLIDRSKSRVDRAEAILASLPARLKTQTDRGRERLGNL 424 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + H++ +S R+LQS +YKN LKRGY I+D +N ++Q L+ Sbjct: 425 SRHADTAVRHQLTRARAELSSQDRVLQSLSYKNVLKRGYAVIRDEDNRPVSQAAQLSAGM 484 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I I F DG+ A+ P + + + QG LF Sbjct: 485 GIAIEFADGRVGAMTTEGGA----PPAGAKKRSARPADPPKQGSLF 526 >gi|116250050|ref|YP_765888.1| exodeoxyribonuclease VII large subunit [Rhizobium leguminosarum bv. viciae 3841] gi|158564215|sp|Q1MMN0|EX7L_RHIL3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|115254698|emb|CAK05772.1| putative exodeoxyribonuclease VII large subunit [Rhizobium leguminosarum bv. viciae 3841] Length = 526 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 242/526 (46%), Positives = 333/526 (63%), Gaps = 4/526 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F + + EYSVSELS +K VE+ V VRGEISGYRG HSSGHAYF+LKD+ +R Sbjct: 5 FDGDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRAR 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ +E+R Sbjct: 65 IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF K +PF+P +I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG Sbjct: 125 KRKLGAEGLFDAARKKRLPFMPGVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +E+ANAI N L+ T PRPD++I+ARGGGS+EDLW FNDE++VRA A S+IP+ Sbjct: 185 EGSGEEVANAIRGFNALEPSGTIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESAIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L ARL + R + + Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAGLAARLQGCMNRQMDQR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 ++ +L++ALP+ DQ L+ R R D L LE+ K R F + ++ D L Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAATGLGRGLELNTINKRRGFERVAAHLRPDLLA 364 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + RQ + E+ E++V++ + AIL L + K + + L Sbjct: 365 GRIAERRQTLNERMARAERMVERLIDRSKSRVDRAEAILASLPARLKTQTDRGRERLGNL 424 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + H++ + +S R+LQS +YKN LKRGY I+D +N ++Q +L+ Sbjct: 425 SRHADTAVRHQLTRARSELSAQDRVLQSLSYKNVLKRGYAVIRDEDNRPVSQAAHLSAGM 484 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I I F DG+ A+ P + + K + QG LF Sbjct: 485 GIAIEFADGRVGAMTTEGG----TPPAGAKKRSTKPAEPPKQGSLF 526 >gi|190889943|ref|YP_001976485.1| exodeoxyribonuclease VII protein, large subunit [Rhizobium etli CIAT 652] gi|226697598|sp|B3PYF6|EX7L_RHIE6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|190695222|gb|ACE89307.1| exodeoxyribonuclease VII protein, large subunit [Rhizobium etli CIAT 652] Length = 526 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 243/528 (46%), Positives = 330/528 (62%), Gaps = 4/528 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 N F + + EYSVSELS +K VE+ V VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 3 NLFDSDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDR 62 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +RIDA+IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ +E Sbjct: 63 ARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIE 122 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK+KL EGLF K +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKV Sbjct: 123 ERKRKLGAEGLFDAARKKRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKV 182 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ E+ANAI N L+ G RPD++I+ARGGGS+EDLW FNDE++VRA A S I Sbjct: 183 QGEGAGDEVANAIRGFNALEPGGAIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRI 242 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L ARL I R + Sbjct: 243 PLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQATALAARLQGCINRQMD 302 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + ++ +L++ALP+ DQ L+ R R D L LE+ K R F + + ++ D Sbjct: 303 QRRQSVRALMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVASHLRPDV 362 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + I + RQ + ++ E+ V++ L AIL L + K + + Sbjct: 363 LSNRIAERRQLLNDRMARAERTVERLLDRSKSRIDRAEAILASLPTRLKTQTDRGRERLG 422 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L + + H++ +S R+LQS +YKN LKRGY I+D ++ ++Q L+ Sbjct: 423 NLTRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAAALSA 482 Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I I F DG+ A+ P + + K QG LF Sbjct: 483 GMGIAIEFADGRVGAMTTEGG----TPPAGAKKRSAKPADPTKQGSLF 526 >gi|254780791|ref|YP_003065204.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter asiaticus str. psy62] gi|254040468|gb|ACT57264.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter asiaticus str. psy62] Length = 529 Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats. Identities = 529/529 (100%), Positives = 529/529 (100%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN Sbjct: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL Sbjct: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK Sbjct: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS Sbjct: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI Sbjct: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD Sbjct: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI Sbjct: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA Sbjct: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF Sbjct: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 >gi|209551852|ref|YP_002283769.1| exodeoxyribonuclease VII large subunit [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226697599|sp|B5ZYC6|EX7L_RHILW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|209537608|gb|ACI57543.1| exodeoxyribonuclease VII, large subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 527 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 239/526 (45%), Positives = 329/526 (62%), Gaps = 3/526 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F + + EYSVSELS +K VE+ V VRGEISGYRG HSSGHAYF+LKD+ +R Sbjct: 5 FDSDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRAR 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ +E+R Sbjct: 65 IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF K +PF+P++I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG Sbjct: 125 KRKLGAEGLFDAARKKRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +E+ANAI N L+ PRPD++I+ARGGGS+EDLW FNDE++VRA A S IP+ Sbjct: 185 EGSGEEVANAIRGFNALEPAGLIPRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L ARL + R + + Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMDQR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 ++ +L++ALP+ DQ L+ R R D L LE+ K R F + ++ D L Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVGAHLRPDLLS 364 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + RQ + E+ E++V++ + AIL L + K + + L Sbjct: 365 GRIAERRQTLNERIVRAERMVERLIDRSKSRIDRAEAILASLPARFKTQTDRSREALANL 424 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + H++ +S R+LQS +YKN LKRGY I+D ++ ++Q L+ + Sbjct: 425 SRHGDTAIRHQLARARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAAALSAGS 484 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG+ A+ P K+ QG LF Sbjct: 485 AVSIEFSDGRIGAVTTEGGAPPASLKKRPAREAG---DPPKQGSLF 527 >gi|327191973|gb|EGE58954.1| exodeoxyribonuclease VII protein, large subunit [Rhizobium etli CNPAF512] Length = 526 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 242/526 (46%), Positives = 329/526 (62%), Gaps = 4/526 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F + + EYSVSELS +K VE+ V VRGEISGYRG HSSGHAYFSLKD+ +R Sbjct: 5 FDSDSPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKDDRAR 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ +E+R Sbjct: 65 IDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K++L EGLF K +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG Sbjct: 125 KRRLGAEGLFDAARKKRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +E+ANAI N L+ G RPD++I+ARGGGS+EDLW FNDE +VRA A S IP+ Sbjct: 185 EGSGEEVANAIRGFNALEPGGAIARPDVLIVARGGGSLEDLWSFNDETVVRAAAESRIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L ARL + R + + Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMDQR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 ++ +L++ALP+ DQ L+ R R D L LE+ K R F + + ++ D L Sbjct: 305 RQSVRALMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVASHLRPDVLS 364 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + I + RQ + E+ E+ V++ L AIL L + K + + L Sbjct: 365 NRIAERRQLLSERMARAERTVERLLDRSKSRIDRAEAILASLPARLKTQTDRGRERLGNL 424 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + H++ +S R+LQS +YKN LKRGY I+D ++ ++Q L+ Sbjct: 425 TRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAAALSAGM 484 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I I F DG+ A+ P + + K QG LF Sbjct: 485 GIAIEFADGRVGAMTTEGGA----PPASAKKRSAKPADPTKQGTLF 526 >gi|86355934|ref|YP_467826.1| exodeoxyribonuclease VII large subunit [Rhizobium etli CFN 42] gi|123513318|sp|Q2KDI7|EX7L_RHIEC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|86280036|gb|ABC89099.1| exodeoxyribonuclease VII large subunit protein [Rhizobium etli CFN 42] Length = 526 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 239/528 (45%), Positives = 330/528 (62%), Gaps = 4/528 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 N F + + EYSVSELS +K +E+ V VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 3 NLFDSDSPTNLAEYSVSELSGSIKRTIETAFDQVRVRGEISGYRGPHSSGHAYFALKDDR 62 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +RIDA+IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ +E Sbjct: 63 ARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIE 122 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P +I V+TSPTGAVIRDIL RIS RFP+ V+++PVKV Sbjct: 123 ERKRRLGAEGLFDAARKKRLPFMPHVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKV 182 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ +E+ANAI N L+ RPD++I+ARGGGS+EDLW FNDE++VRA A S I Sbjct: 183 QGEGSGEEVANAIRGFNALEPASAISRPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRI 242 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L ARL + R + Sbjct: 243 PLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKAELEAQAAALAARLQGCMNRQMD 302 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + ++ SL++A P+ DQ L+ R R D L LE+ K R F +I ++ D Sbjct: 303 QRRQSVRSLMRAFPSLDQLLALPRRRFDEAAAGLGRGLELNTINKRRGFERVIAHLRPDL 362 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L I + RQ + E+ E++V++ + + AIL L + K + + Sbjct: 363 LSGRISERRQMLNERMVRAERMVERLIDRSASRVERAEAILASLPARLKAQTDRSRERLG 422 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L + + H++ +S R+LQS +YKN L+RGY I+D +N ++Q L+ Sbjct: 423 NLTRHADTAIRHQLTRARAELSAQDRVLQSLSYKNVLRRGYAVIRDEDNRPVSQAAALSA 482 Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I I F DG+ A+ P + + K + QG LF Sbjct: 483 GMGIAIEFADGRIGAMTTEGG----TPPGGAKKRSTKPAEPTKQGSLF 526 >gi|163757587|ref|ZP_02164676.1| putative exodeoxyribonuclease VII large subunit [Hoeflea phototrophica DFL-43] gi|162285089|gb|EDQ35371.1| putative exodeoxyribonuclease VII large subunit [Hoeflea phototrophica DFL-43] Length = 530 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 223/531 (41%), Positives = 326/531 (61%), Gaps = 3/531 (0%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + + E++VSELS ++ VE +V VRGEISGYRG HSSGHAYFSLKD+ Sbjct: 1 MSSLLDDSPTNAAEFTVSELSGSIRRTVEDAFGNVRVRGEISGYRGPHSSGHAYFSLKDD 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +RI+A+IWKG ++++ PEEG+E + GKITT+ GSSKYQI+IES+ P+G+G L+ + Sbjct: 61 RARIEAVIWKGVFSRLKHRPEEGLEVIATGKITTYAGSSKYQIVIESIEPAGAGALMALI 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+R+ KL EGLF + K +P++P +I V+TSPTGAVIRDIL RI RFP+ VI++PV+ Sbjct: 121 EERRCKLAAEGLFDEARKQLLPYMPLVIGVVTSPTGAVIRDILHRIEDRFPVHVIVWPVR 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD E+ANAI N L G RPD+II+ARGGGS+EDLW FNDE +VRA A S Sbjct: 181 VQGDTSGNEVANAITGFNALAPGGRIKRPDLIIVARGGGSLEDLWGFNDEAVVRAAAESD 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETDWTL D+A+D RAPTPTGAAEMAVPVK L++ L L ARL + R++ Sbjct: 241 IPLISAVGHETDWTLIDHASDRRAPTPTGAAEMAVPVKADLEAHLAGLAARLKSAQSRML 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L +ALP D L+ R RLDR + L L++ + R F RI Sbjct: 301 DRRREAVRGLTRALPTLDSVLALPRQRLDRSGQGLGQALQLNTANRRRGFERQAARITPI 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L+ I++ RQ + ++ ++ +++ + + + +L + + + + Sbjct: 361 ALVSAIREKRQVLRDRATRADRSLERRVEVLRTGLERHALVLSAVPRRITETQTHARERL 420 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R E L+ I ++ R+L+S +Y++ L RGY +++ + +++ + Sbjct: 421 TGLGRRGETALTQLIGQHKRALGAQARMLKSLSYQSVLGRGYAVVRNQDRKLLSRAEQVQ 480 Query: 481 TKTRILINFFDGQANAIV--INKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I + F DG+ +A+V P +P K+ + NK + G QG LF Sbjct: 481 SGEMIGVEFADGEVSALVNGTGAEAPSSKPKKQTRTKANKTPEPG-QGSLF 530 >gi|222084548|ref|YP_002543077.1| exodeoxyribonuclease VII, large subunit [Agrobacterium radiobacter K84] gi|221721996|gb|ACM25152.1| exodeoxyribonuclease VII, large subunit [Agrobacterium radiobacter K84] Length = 571 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 245/538 (45%), Positives = 331/538 (61%), Gaps = 9/538 (1%) Query: 1 MNPF-SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ F + + EYSVSELS +K VES V VRGEISGYRG HSSGHAYFSLKD Sbjct: 34 MSSFFENDSPSNLAEYSVSELSGSIKRTVESAFDQVRVRGEISGYRGPHSSGHAYFSLKD 93 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +RIDA+IWKGT +K++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ Sbjct: 94 DRARIDAVIWKGTFSKLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMAL 153 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE+RK+KL EGLF + K +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PV Sbjct: 154 LEERKRKLGAEGLFDAERKRRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPV 213 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG+ E+ANAI N + G PRPD++I+ARGGGS+EDLW FNDE +VRA A S Sbjct: 214 KVQGEGSGDEVANAIRGFNEVAPGGPLPRPDVLIVARGGGSLEDLWSFNDEAVVRAAAAS 273 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L + ARL + R Sbjct: 274 EIPLISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKADLEAQLASFAARLQGGVSRQ 333 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + +LL+ALP+ DQ L+ R R D L LE+ K R F + ++ Sbjct: 334 MDQRRQAVRALLRALPSLDQLLALPRRRFDEAASGLGRGLELNTLNKRRTFERAASHLRP 393 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 D L + I + RQ + E+ E+ +++ + A+ L + + + Sbjct: 394 DVLSNRIVERRQMLSERMTRAERTIERMIDRARARIGRADAVFATLPSRLETQTGRARDL 453 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + L R + + H++ ++ R+LQS +YKN LKRGY ++D + ++ L Sbjct: 454 LGNLSRRTDTAIRHQLVRARGELAAQERVLQSLSYKNVLKRGYAVVRDEADRPVSLAAAL 513 Query: 480 ATKTRILINFFDGQANAIVIN--------KAPPKEQPTKKCQLHNNKREKQGTQGELF 529 AT I I F DG+ A+ + + P P KK QG LF Sbjct: 514 ATGAAISIEFADGRVGAVTGDNSVAPAPTETPTGVPPQKKRVAKPAGSADPSNQGSLF 571 >gi|239833509|ref|ZP_04681837.1| exodeoxyribonuclease VII, large subunit [Ochrobactrum intermedium LMG 3301] gi|239821572|gb|EEQ93141.1| exodeoxyribonuclease VII, large subunit [Ochrobactrum intermedium LMG 3301] Length = 529 Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats. Identities = 224/521 (42%), Positives = 317/521 (60%), Gaps = 4/521 (0%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ SR++A+I Sbjct: 13 SSNVAEYSVSEISGALKRTVEDVFGHVRVRGEISGYRGPHSSGHAYFALKDDRSRLEAVI 72 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE+RK++L Sbjct: 73 WRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLEERKRRLA 132 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EGLF K +PF+P++I V+TSPTGAVIRD++ RI+ R+PL VI++PV+VQG+ Sbjct: 133 SEGLFDPAVKQLLPFMPRVIGVVTSPTGAVIRDVIHRIADRYPLHVIVWPVRVQGETSGP 192 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+A A+ NTL EG PRPD++I+ARGGGS+EDLW FNDE++VRA+A S IP+ISA+G Sbjct: 193 EVATAVHGFNTLPEGGAIPRPDVVIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVG 252 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETDWTL D AAD+RAPTPTGAAEMAVPVK L ++L ARL++ I R I K + Sbjct: 253 HETDWTLIDLAADIRAPTPTGAAEMAVPVKADLLAALAGQSARLSSAISRFIDLKRRSHR 312 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 S +ALP++DQ L+ R R D L L + +K HF + ++ L + Sbjct: 313 SAARALPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFEGHVRQLSPRLLQRRFTE 372 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + I Q + + ++ LR + L E R +++L R + Sbjct: 373 LERGISVLGQRLPRALETFLRERRTTFTHRANRLSA--EPILRRTKLATNSMEQLDRRRD 430 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + I+ R++++ +Y++ L+RG+ + D I Q ++ + I Sbjct: 431 QAVRILIERAKRRGQELERLMRTLSYESVLERGFAVVFDAEGKPIKQAATVSAGDALSIR 490 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 F DG + VI +P K Q + G QG LF Sbjct: 491 FRDG--DVAVIADEGGGSEPAKPVQTKKVQSPGSGNQGSLF 529 >gi|15964051|ref|NP_384404.1| exodeoxyribonuclease VII large subunit [Sinorhizobium meliloti 1021] gi|307301196|ref|ZP_07580958.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti BL225C] gi|307321097|ref|ZP_07600502.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti AK83] gi|22095673|sp|Q92SR7|EX7L_RHIME RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|15073227|emb|CAC41735.1| Putative exodeoxyribonuclease 7 large subunit [Sinorhizobium meliloti 1021] gi|306893269|gb|EFN24050.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti AK83] gi|306903652|gb|EFN34239.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium meliloti BL225C] Length = 526 Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 230/526 (43%), Positives = 325/526 (61%), Gaps = 4/526 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F ++ + EYSVSELS +K VE HV VRGEISGYRG HSSGHAYF+LKD+ +R Sbjct: 5 FDSESPSNVAEYSVSELSGSIKRTVEQAFEHVRVRGEISGYRGPHSSGHAYFALKDDRAR 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA++WK T +++F PEEG+E + G++TTFPGSSKYQI+I+SL P+G+G L+ +E+R Sbjct: 65 IDAVVWKTTFARLKFRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMALIEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF K P+PF+P+++ V+TSPTGAVIRDIL RI+ RFP+ VI++PV+VQG Sbjct: 125 KRKLAAEGLFDAGRKRPLPFMPRVVGVVTSPTGAVIRDILHRIADRFPVHVIVWPVRVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D +EI AI N L+ G + PRPD++I+ARGGGS+EDLW FNDE +VRA A S+IP+ Sbjct: 185 DGACEEIVAAIEGFNALQPGGSIPRPDVLIVARGGGSLEDLWCFNDEAMVRAAAASAIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL D+AAD RAPTPTGAAEMAVPVK L++ L +L ARL R + + Sbjct: 245 ISAVGHETDWTLIDHAADQRAPTPTGAAEMAVPVKADLEAQLASLAARLKGAAARQMDNR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 TL SL +ALP+ DQ L+ R R D L L++ K R F ++ + L Sbjct: 305 RQTLRSLARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERNAAHLRPELLT 364 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I RQ +L+ E+IV++ ++ A L +L + +I + L Sbjct: 365 ARIVDRRQRVLDAVNRAERIVERKVQRGAQRISSADASLRVLPSRLIGQIHRASDRVSSL 424 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R + ++ ++ ++++ R+LQS +Y + L+RG+ ++D + Q + Sbjct: 425 GRRGDAAIAADLRRMKSALAAQDRVLQSLSYHSVLQRGFALVRDAAGEPVKQAAAVHPGM 484 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG+ A+ + P K+ QG LF Sbjct: 485 ALSLEFADGRIAAVAGEDGTAPQSPKKRPARSGEPT----KQGSLF 526 >gi|153010319|ref|YP_001371533.1| exodeoxyribonuclease VII large subunit [Ochrobactrum anthropi ATCC 49188] gi|166232359|sp|A6X3A0|EX7L_OCHA4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|151562207|gb|ABS15704.1| exodeoxyribonuclease VII, large subunit [Ochrobactrum anthropi ATCC 49188] Length = 527 Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 217/521 (41%), Positives = 318/521 (61%), Gaps = 4/521 (0%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ +R++A+I Sbjct: 11 SSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDRARLEAVI 70 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE+RK++L Sbjct: 71 WRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLEERKRRLA 130 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EGLF K +PF+P++I V+TSPTGAVIRDI+ RI+ R+PL VI++PV+VQG+ Sbjct: 131 TEGLFDPAVKQLLPFMPRVIGVVTSPTGAVIRDIIHRIADRYPLHVIVWPVRVQGETSGP 190 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+A A+ N L + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S IP+ISA+G Sbjct: 191 EVAAAVDGFNALPDEGNIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVG 250 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETDWTL D AAD+RAPTPTGAAEMAVPVK L ++L ARL++ + R I K Sbjct: 251 HETDWTLIDLAADIRAPTPTGAAEMAVPVKADLLATLAGQSARLSSAMSRFIDLKRQAHR 310 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 S +ALP++DQ L+ R R D L L + +K HF+ ++ L + Sbjct: 311 SAARALPSADQLLALPRRRFDEAAARLTRALFVNTQKKRVHFDGHARQLSPRLLQRRFTE 370 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + Q + + ++ LR + L E R I++L R + Sbjct: 371 LQRDVSALGQRLPRALEAFLRERRTAFIHRANRLSA--EPILRRTKLTSVAIEQLDRRRD 428 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + I+ R++++ +Y++ L+RG+ + D + Q +++ + I Sbjct: 429 QAVRLLIERAKRRGQELERLMRTLSYESVLERGFAVVFDEEGKPVKQAGSVSAGDALSIR 488 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 F DG+ + ++ + +P K Q + G QG LF Sbjct: 489 FRDGEVAVVAGDE--DESEPAKLVQTKKVQSPGSGNQGSLF 527 >gi|150398684|ref|YP_001329151.1| exodeoxyribonuclease VII large subunit [Sinorhizobium medicae WSM419] gi|166232367|sp|A6UF86|EX7L_SINMW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|150030199|gb|ABR62316.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium medicae WSM419] Length = 526 Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats. Identities = 229/526 (43%), Positives = 326/526 (61%), Gaps = 4/526 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F ++ + EYSVSELS +K +E HV VRGEISGYRG HSSGHAYF+LKD+ +R Sbjct: 5 FDSESPSNVAEYSVSELSGSIKRTIEQTFEHVRVRGEISGYRGPHSSGHAYFTLKDDRAR 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA++WKGT +++F PEEG+E + G++TTFPGSSKYQ++I++L P+G+G L+ +E+R Sbjct: 65 IDAVVWKGTFARLKFRPEEGMEVIATGRVTTFPGSSKYQVVIDALEPAGAGALMALIEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF K P+PF+PK+I V+TSPTGAVIRDIL RI+ RFP+ V+++PV+VQG Sbjct: 125 KRKLAAEGLFDAGRKRPLPFMPKVIGVVTSPTGAVIRDILHRIADRFPVHVLVWPVRVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D +EI AI N L+ G RPD++I+ARGGGS+EDLW FNDE +VRA A S+IP+ Sbjct: 185 DGACEEIVAAIEGFNALQPGGPIARPDVLIVARGGGSLEDLWCFNDEAMVRAAAGSAIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL D+AAD RAPTPTGAAEMAVPVK L++ L +L ARL +R + + Sbjct: 245 ISAVGHETDWTLIDHAADQRAPTPTGAAEMAVPVKADLEAQLASLSARLKGAAVRQMDNR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 TL SL +ALP+ DQ L+ R R D L L++ K R F ++ D L Sbjct: 305 RQTLRSLARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERSAAHLRPDLLT 364 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I RQ +++ E+IV++ + A L L + ++ + + Sbjct: 365 ARIVDRRQRVVDAVNRAERIVERQVHRGAARVASADASLRALPSRLIGQVHRASDRVSAM 424 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R + ++ ++ ++V+ R+LQS +Y+N L+RG+ ++D + Q + + Sbjct: 425 SRRADAAIAADLRRLKSAVAAQDRVLQSLSYRNVLQRGFALVRDAAGEPVKQAAAVHSGM 484 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG+ A+ P + P K+ QG LF Sbjct: 485 ALSVEFADGRVAAVAGEDGTPSQAPKKRPARAGEPT----KQGSLF 526 >gi|222147129|ref|YP_002548086.1| exodeoxyribonuclease VII large subunit [Agrobacterium vitis S4] gi|254783685|sp|B9JYI6|EX7L_AGRVS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|221734119|gb|ACM35082.1| exodeoxyribonuclease VII large subunit [Agrobacterium vitis S4] Length = 543 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 230/540 (42%), Positives = 325/540 (60%), Gaps = 15/540 (2%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F + E+SVSELS +K +E+ V VRGEISG+RG HSSGHAYFSLKD+ +R Sbjct: 5 FDDDQPSNLTEFSVSELSGSIKRTIETAFDQVRVRGEISGFRGQHSSGHAYFSLKDDKAR 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IWKG+ +K+++ PEEG+E + G+ITTFPGSSKYQI+IE + P+G+G L+ +E+R Sbjct: 65 IDAVIWKGSFSKLKYRPEEGMEVIATGRITTFPGSSKYQIVIEQMEPAGAGALMALIEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K++ EGLF K +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG Sbjct: 125 KRRFTAEGLFDPATKQLLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + E+ANAI N + PRPD++I+ARGGGS+EDLW FNDE +VRA A S+IP+ Sbjct: 185 EGSGDEVANAINGFNAFQPDGVIPRPDVLIVARGGGSLEDLWSFNDEAVVRAAAASAIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL DYAAD+RAPTPTGAAEMAVPVK L++ L L ARL + R + ++ Sbjct: 245 ISAVGHETDWTLIDYAADVRAPTPTGAAEMAVPVKADLEAQLAGLAARLAGAVNRQMDHR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L +L +ALP+ DQ L+ R R D L +LE+ K + F ++ D L+ Sbjct: 305 RQNLRALARALPSLDQLLALPRRRFDEAASGLGRSLELNTMTKRQSFERAAAKLSPDMLV 364 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + RQ + E+ ++I+++ + A L + + K + + Sbjct: 365 RRLVERRQRVSERAALSDRIIERLIERQKANLGRIDATLTAVPARLKAQTGRSRDRLDSF 424 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R + + + ++ ++VS R+LQS +YKN L RGY I+ ++ +++ L Sbjct: 425 SRRADSAVINDLRRARSTVSAHDRMLQSLSYKNVLMRGYAVIRGQDDRPLSRAAGLEDGR 484 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKC--------------QLHNNKREKQGTQGELF 529 I I F DG+ +A V + P + K E QG LF Sbjct: 485 AIAIEFADGRVSA-VTGEGDKASPPPQAASATTTPAPGRPNPLPKSPKKSEPPAGQGSLF 543 >gi|27382618|ref|NP_774147.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium japonicum USDA 110] gi|31563103|sp|Q89DD2|EX7L_BRAJA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|27355790|dbj|BAC52772.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium japonicum USDA 110] Length = 545 Score = 451 bits (1161), Expect = e-124, Method: Composition-based stats. Identities = 209/541 (38%), Positives = 306/541 (56%), Gaps = 15/541 (2%) Query: 3 PFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P + L+ PE++VSELS LK VE HV VRGEISG+RG HSSGH YF+LKD Sbjct: 6 PMPPAEPLLNAPEFTVSELSQSLKRTVEDAFGHVRVRGEISGFRGAHSSGHCYFALKDES 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE+L P+G G L+ +E Sbjct: 66 AKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGIGALMALME 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RKKKL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP V+++PVKV Sbjct: 126 ERKKKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRHVLVWPVKV 185 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ +++A AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A S I Sbjct: 186 QGEGSAEQVAAAIRGFNALPEGGKIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESMI 245 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETD TL D+ AD RAPTPT AAEMAVPV+ L + +L R R + Sbjct: 246 PLISAVGHETDITLIDFVADKRAPTPTAAAEMAVPVRSDLFVEVADLARRTRAYWQRAHE 305 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + + L + +ALP + L+ R RLD L L+ +R F ++ Sbjct: 306 SRRSELRAAARALPAAGDLLAIPRQRLDSAGAALPRGLKANTHAHFRRFTAAGAKLTLRV 365 Query: 362 LIHNIQKNRQHILEKQQHI-----EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 L I + + + + + ++ R+ LE + + + L + Q +N I Sbjct: 366 LHGQIAQADHRLTVCGERLGLSARSLLRQRRDRFAGLEVRLRASKLSNAQAQ-RNAIARQ 424 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 +L R L ++ V + ++L + +Y+ L RG+ ++D + + Sbjct: 425 RERTHRLAERANRALVTLLQRLDARVEASGKLLSALSYRGVLARGFALVRDEAGHPLHSA 484 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQP--------TKKCQLHNNKREKQGTQGEL 528 ++ R+ I F DG+ A P ++ + + K QG L Sbjct: 485 DSVGPGARVEIEFADGRVGATTDADRPAPPAKRAQQPKPAAQETKPAPKRVGKPVDQGSL 544 Query: 529 F 529 F Sbjct: 545 F 545 >gi|146342911|ref|YP_001207959.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium sp. ORS278] gi|146195717|emb|CAL79744.1| putative exonuclease VII, large subunit OB-fold nucleic acid binding domain [Bradyrhizobium sp. ORS278] Length = 538 Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 204/540 (37%), Positives = 296/540 (54%), Gaps = 13/540 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M P + PE++VSELS LK VE HV VRGEISG+RG HSSGH YF+LKD Sbjct: 1 MPPAEALP--NAPEFTVSELSSALKRTVEDQFGHVRVRGEISGFRGPHSSGHCYFALKDE 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I+A+IWKG ++ F P+EG+E + GK+TT+P SSKYQI+IE+L P+G G L+ + Sbjct: 59 SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPNSSKYQIVIEALEPAGIGALMALM 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK+KL EGLF K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PVK Sbjct: 119 EERKRKLGAEGLFDPARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVK 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD +++A AI N L E PRPD++I+ARGGGS+EDLW FN+E++VRA A S Sbjct: 179 VQGDGSAEQVAAAIRGFNDLPEDGPIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESM 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + +L R++ R Sbjct: 239 IPLISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRSELMQEVASLARRVSVCWQRGQ 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + N L + +ALP + L+ R RLD L L+ +R F ++ Sbjct: 299 ESRRNELRAAARALPGASDLLAIPRQRLDAASSSLPRALKTNTHVHFRQFAAASAKLTLR 358 Query: 361 FLIHNIQKNRQHILEKQQHI----EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 L I + ++ + + ++ + A + + I Sbjct: 359 VLHGQISQADHRLVVSSERLSLSARALLHRRRERFEALDARFKASRQAYAQAKRQAIARE 418 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 ++L R L+ I ++L + +Y++ L RG+ ++D + + Q Sbjct: 419 RDRAERLADRASRALATSILRLRARTDHAGQLLSALSYRSVLARGFALVRDEAGHPLHQA 478 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQL-------HNNKREKQGTQGELF 529 + + + I F DG+ A +P + + QG LF Sbjct: 479 AGIESGAALSIEFADGRVAATAGAGSPLPTSAPAAPKPVRESKPAAAKRTPDPADQGSLF 538 >gi|85717179|ref|ZP_01048137.1| exodeoxyribonuclease VII large subunit [Nitrobacter sp. Nb-311A] gi|85696012|gb|EAQ33912.1| exodeoxyribonuclease VII large subunit [Nitrobacter sp. Nb-311A] Length = 541 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 209/541 (38%), Positives = 305/541 (56%), Gaps = 12/541 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + + PEY+VSELS LK VE+ HV VRGEISG+RG H+SGH YF+LKD Sbjct: 1 MPANPAQLLANSPEYTVSELSSALKRTVENAYGHVRVRGEISGFRGPHASGHCYFALKDE 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE++ P+G G L+ + Sbjct: 61 SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALM 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RKKKL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+ Sbjct: 121 EERKKKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVR 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ ++IA AI N +G PRPD++I+ARGGGS+EDLW FN+E++VRA A S Sbjct: 181 VQGEGSAEQIAAAIDGFNARPDGGPVPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAASM 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + NL AR R Sbjct: 241 IPLISAVGHETDVTLIDFAADQRAPTPTAAAEMAVPVRSDLLVEVSNLAARALVAWKRGH 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L S +ALP + + L+ R +LD L L +R F I + + Sbjct: 301 DDRRTELRSSARALPGAFELLAIPRQKLDNAAAALPRALRASTHVHHRRFTQISSGLTLR 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYL 416 L + +Q + + + LR+ A L R + + +I Sbjct: 361 VLRAQVAHAKQSVAATGARLTHCTQVVLRHRRDRFAGLAARLKASRLANVQAQREQISRA 420 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 ++L R + ++ ++ ++++L + +Y+ L RG+ ++D + + Sbjct: 421 EERTRRLFERAHRAVVTSLQRHEARIAHSSQLLAAVSYRGVLARGFALVRDETGHALRSA 480 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQP--------TKKCQLHNNKREKQGTQGEL 528 + + TR+ + F DGQ NA + +R K QG L Sbjct: 481 AAVGSGTRLTLEFIDGQVNATSDTDQTAPAASSTTESNPGSPPRPASGKRRAKIADQGSL 540 Query: 529 F 529 F Sbjct: 541 F 541 >gi|13475744|ref|NP_107311.1| exodeoxyribonuclease VII large subunit [Mesorhizobium loti MAFF303099] gi|22095676|sp|Q987V3|EX7L_RHILO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|14026500|dbj|BAB53097.1| exodeoxyribonuclease VII large subunit [Mesorhizobium loti MAFF303099] Length = 521 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 211/529 (39%), Positives = 314/529 (59%), Gaps = 8/529 (1%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + ++ + EY+VSE+S LK VE +V VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 1 MSEAASESRTNATEYTVSEISGALKRTVEDVFGNVRVRGEISGYRGPHSSGHAYFALKDD 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +R+DA++WKGT+++++F PEEG+E + GK+TT+PG S YQI+I++L P+G+G L+ L Sbjct: 61 RARLDAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGKSNYQIVIDNLEPAGAGALMALL 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF K +PF+P+ I V+TSPTG+VIRDI+ RI RFPL V+++PV+ Sbjct: 121 EERKRRLQAEGLFDAGRKRRLPFMPRTIGVVTSPTGSVIRDIIHRIKDRFPLHVLVWPVR 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD E+ NA+ N L + RPD++I+ARGGGS+EDLW FNDE + RA+A S Sbjct: 181 VQGDTASAEVTNAVTGFNALAWDGSIQRPDLLIVARGGGSLEDLWGFNDEALARAVAASG 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETDWTL D AD+RAPTPTGAAE+AVPVK L+++L +L ARL ++R Sbjct: 241 IPVISAVGHETDWTLIDLVADVRAPTPTGAAEIAVPVKADLEATLASLGARLKAAVLRNF 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + K + +ALP+ DQ L+ R RLD L L + + RK R+ Sbjct: 301 ERKRQAARAAARALPSPDQLLALPRRRLDEATSRLGRGLSVSVDRKRARLQG--QRLTPA 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L I + R + +R L + ++ + Sbjct: 359 TLSRRINEARTLTGRDLARAQAAFFAIVRERRARFARTATRLSPAPIARRQKLQA--DTL 416 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R + ++S +++ +S R+L + ++K L RG+ +++ + I Q ++ Sbjct: 417 AALARRQDRVISLRLERLRGQLSQAERLLTTLSHKAVLARGFALVKNADGAVIKQAADVV 476 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + + F DG A+A+ + A K + K ++ G QG LF Sbjct: 477 SGMALTLEFADGTADAVATSGAA----RPKPAAKPSTKAKEPGNQGSLF 521 >gi|92118640|ref|YP_578369.1| exodeoxyribonuclease VII large subunit [Nitrobacter hamburgensis X14] gi|91801534|gb|ABE63909.1| Exodeoxyribonuclease VII large subunit [Nitrobacter hamburgensis X14] Length = 541 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 214/542 (39%), Positives = 313/542 (57%), Gaps = 14/542 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + + PEY+VSELS LK VE+ HV VRGEISG+RG H SGH YF+LKD Sbjct: 1 MPANPAQLLANAPEYTVSELSSALKRTVENAYGHVRVRGEISGFRGPHGSGHCYFALKDE 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE+L P+G G L+ + Sbjct: 61 SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGIGALMALM 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RKKKL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+ Sbjct: 121 EERKKKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVR 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ ++IA AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A+S Sbjct: 181 VQGEGSAEQIAAAIDGFNALPEGGHVPRPDLLIVARGGGSLEDLWSFNEEIVVRAAASSM 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + AR R Sbjct: 241 IPLISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRTELFVEVSGFAARAIVAWRRGH 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L S +ALP + + L+ R +LD + L L +R F I + Sbjct: 301 DDRRTELRSAARALPGAGELLAIPRQKLDGVAAALPRVLRASTHLHHRRFTEISRGLTLR 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 L + +Q + + + + R++ L + K + L + Q ++RI Sbjct: 361 VLRAQVAHAKQSVAATGARLAHGTQVVLRHRRDRFVGLAIRLKASRLANAQAQ-RDRIAR 419 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 + ++L R L+ ++ ++ + ++L +F+Y+ L RG+ ++D + Sbjct: 420 ANERTQRLAERTRRALATLLQRHEARITYSGQLLAAFSYRGVLARGFALVRDDAGQALRS 479 Query: 476 KRNLATKTRILINFFDGQANAI-------VINKAPPKEQPTKKCQLHNNKR-EKQGTQGE 527 + R+ + F DG+ A + AP P + + + KR K QG Sbjct: 480 ASAVGPGARLTLEFTDGRVAATADDDQSAATSSAPTGSNPRGRPKPASGKRAAKAADQGS 539 Query: 528 LF 529 LF Sbjct: 540 LF 541 >gi|316932705|ref|YP_004107687.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris DX-1] gi|315600419|gb|ADU42954.1| exodeoxyribonuclease VII, large subunit [Rhodopseudomonas palustris DX-1] Length = 537 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 205/532 (38%), Positives = 302/532 (56%), Gaps = 7/532 (1%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 S + + E++VSELS LK VE HV VRGEI+G+RG HSSGH YF+LKD ++I Sbjct: 6 SPQALANVGEFTVSELSQALKRTVEDTYGHVRVRGEITGFRGPHSSGHCYFALKDEGAKI 65 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE+L P+G G L+ +E+RK Sbjct: 66 EAVIWKGVAGRMRFRPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEERK 125 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 KKL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+VQG+ Sbjct: 126 KKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 185 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +++A AI N L E PRPD++I+ARGGGS+EDLW FN+E++VRA A+S IP+I Sbjct: 186 GSAEQVAAAIHGFNALPEDGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSMIPLI 245 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L R+ + R ++ Sbjct: 246 SAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRAELFVEVGGLARRMLSSWQRGQDFRR 305 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N L + +ALP + L+ R RLD L L +R F + L Sbjct: 306 NELRAAARALPGASDLLAIPRQRLDTAAASLPRALRANTHAHHRRFAAAAAGMTLKVLRA 365 Query: 365 NIQKNRQHIL---EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTHI 420 + + + + Q + +H R F ++ + +Q + RI + Sbjct: 366 QVAHSAHRLDVSGTQLQRCARATLRHRRDRFEGLAVRLQASRLANQQAQRMRIAGEQERL 425 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++L R L+ ++ + T ++L + +Y+ L RG+ ++D + ++A Sbjct: 426 QRLAERARRALATLLERRQARLDATGKLLTALSYRGVLARGFALVRDAEGRSVHTAASVA 485 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK---CQLHNNKREKQGTQGELF 529 R+ + F DG+ + K + K QG LF Sbjct: 486 AGARLSVEFADGRLGVTADGGSGSPAHTAKPASVPAKAAKRLVKPAGQGSLF 537 >gi|325291705|ref|YP_004277569.1| exodeoxyribonuclease VII large subunit [Agrobacterium sp. H13-3] gi|325059558|gb|ADY63249.1| exodeoxyribonuclease VII large subunit [Agrobacterium sp. H13-3] Length = 534 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 238/534 (44%), Positives = 336/534 (62%), Gaps = 5/534 (0%) Query: 1 MNP-FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ FS + E+SVSELS +K VE+ V VRGEISGYRG HSSGHAYFSLKD Sbjct: 1 MSDIFSNAALSNLAEFSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFSLKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +RIDA+IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IESL P+G+G L+ Sbjct: 61 DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIESLEPAGAGALMAL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE R+++L EGLF + K +PF+P++I V+TSPTGAVIRDIL RIS RFP+ V+++PV Sbjct: 121 LEDRRRRLAAEGLFDAERKRRLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG+ +E+ANAI N L+ G RPD++I+ARGGGS+EDLW FNDE++VRA A S Sbjct: 181 KVQGEGSGEEVANAIRGFNALQPGGEIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAES 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL DYAAD+RAPTPTGAAEMAVPV+ L++ L L ARL+ + R Sbjct: 241 EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQ 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + +L++ALP+ DQ L+ R R D L LE+ K R F + ++ Sbjct: 301 MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLEMTTLNKRRAFERSASGLRP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + L++ ++++RQ + E+ Q E +V++ L + L L + ++ Sbjct: 361 EILLNGLRQHRQRVTERMQRAEALVERRLLQAQSRISSTDSALRSLPARLLGQLERQKER 420 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + R + + H++ + ++ RILQS +YKN L RGY I+D N +T+ + Sbjct: 421 VVTATRRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLTRAAAI 480 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE----QPTKKCQLHNNKREKQGTQGELF 529 A+ + + F DG+ A+ +A P K + G QG LF Sbjct: 481 ASGAVVSMEFADGRVAALTTGEATPSSDVQTPAAPKKKPVKPASSDPGNQGSLF 534 >gi|75676737|ref|YP_319158.1| exodeoxyribonuclease VII large subunit [Nitrobacter winogradskyi Nb-255] gi|74421607|gb|ABA05806.1| Exodeoxyribonuclease VII large subunit [Nitrobacter winogradskyi Nb-255] Length = 541 Score = 442 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 212/541 (39%), Positives = 309/541 (57%), Gaps = 12/541 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + + PEY+VSELS LK VE+ HV VRGEISG+RG H+SGH YF+LKD Sbjct: 1 MPANPAQLLANAPEYTVSELSSALKRTVENAYGHVRVRGEISGFRGPHASGHCYFALKDE 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE++ P+G G L+ + Sbjct: 61 SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALM 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RKKKL +GLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+ Sbjct: 121 EERKKKLAAQGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVR 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ ++IA AI N L +G PRPD++I+ARGGGS+EDLW FN+E++VRA A S Sbjct: 181 VQGEGSAEQIAAAIDGFNALPDGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAGSM 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + +L AR R Sbjct: 241 IPLISAVGHETDVTLIDFAADQRAPTPTAAAEMAVPVRSDLAIEISDLAARALVAWKRGH 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L S +ALP + + L+ R +LD L L +R F I + Sbjct: 301 DDRRTELRSAARALPGAGELLAIPRQKLDNAAAALPRALRASTHLHHRRFTRISGGLTLR 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYL 416 L I +Q + + + LR+ L R + ++RI Sbjct: 361 VLHAQITHAKQSVAATGARLAHCTQVMLRHRRDRFAGLAVRLRASRVANVQAQRDRIARD 420 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 + ++L R L ++ ++ + ++L + +Y+ L RG+ ++D + Sbjct: 421 NERTRRLAERARRALVTLLRRHEARITHSGQLLAALSYRGVLARGFALVRDDAGQAVRSA 480 Query: 477 RNLATKTRILINFFDGQANAI-------VINKAPPKEQPTKKCQLHNNKR-EKQGTQGEL 528 + R+ + F DG+ N + PP+ PT + + + KR K QG L Sbjct: 481 TAAGSGARLTLEFADGKVNVTSDTDQTAATSSNPPRSGPTSEPKPVSRKRAAKPAGQGSL 540 Query: 529 F 529 F Sbjct: 541 F 541 >gi|227824137|ref|YP_002828110.1| exodeoxyribonuclease VII large subunit [Sinorhizobium fredii NGR234] gi|254783705|sp|C3MCQ9|EX7L_RHISN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|227343139|gb|ACP27357.1| exodeoxyribonuclease VII, large subunit [Sinorhizobium fredii NGR234] Length = 527 Score = 441 bits (1135), Expect = e-121, Method: Composition-based stats. Identities = 230/519 (44%), Positives = 330/519 (63%), Gaps = 3/519 (0%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + EYSVSELS +K +E HV VRGEISGYRG HSSGHAYF+LKD+ +R++A+IWK Sbjct: 12 NVAEYSVSELSGSIKRTLEQAFEHVRVRGEISGYRGPHSSGHAYFALKDDRARMEAVIWK 71 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 GT +++ PEEG+E + G++TTFPGSSKYQI+I+SL P+G+G L+ LE+RK+KL E Sbjct: 72 GTFARLKLRPEEGMEVIATGRVTTFPGSSKYQIVIDSLEPAGAGALMALLEERKRKLAAE 131 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF K P+PF+PK+I V+TSPTGAVIRDIL RI+ RFP+ V+++PV+VQGD +E+ Sbjct: 132 GLFDAARKRPLPFMPKVIGVVTSPTGAVIRDILHRIADRFPVHVVVWPVRVQGDGASEEV 191 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI N L+EG PRPD++I+ARGGGS+EDLW FNDE +VRA+A S IP+ISA+GHE Sbjct: 192 AAAIRGFNALEEGGPIPRPDVLIVARGGGSLEDLWGFNDEAVVRAVAASGIPLISAVGHE 251 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TDWTL DYA+D RAPTPTGAAEMAVPVK L++ + NL ARL R + ++ + L +L Sbjct: 252 TDWTLIDYASDQRAPTPTGAAEMAVPVKADLEAQVANLSARLQAAATRQMDHRRHALRAL 311 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 +ALP+ DQ L+ R R D L L++ K R F I ++ + L I++ R Sbjct: 312 ARALPSLDQLLALPRRRFDEAAAGLGRGLQMNTANKRRSFERIAAHLRPELLTTRIREQR 371 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +H+LE E+ V++ + A L L + +I + L R + Sbjct: 372 RHLLEAINKAERCVERQIDRRQARVSAADASLRTLPSRLAGQIHRSSDRVSGLGRRADAA 431 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ +++ +++ R+LQS +Y+N L+RG+ ++D + + Q + + + F Sbjct: 432 MAAEMRRLKGALAAQDRVLQSLSYRNVLQRGFALVRDAAGDPVKQAAAVTAGMALSLEFA 491 Query: 491 DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 DG+ +A+ + P P + ++ QG LF Sbjct: 492 DGRVSAVAGEEGAP---PPAAPKKRASRPVVPTKQGSLF 527 >gi|328545113|ref|YP_004305222.1| exodeoxyribonuclease 7 large subunit [polymorphum gilvum SL003B-26A1] gi|326414855|gb|ADZ71918.1| Exodeoxyribonuclease 7 large subunit [Polymorphum gilvum SL003B-26A1] Length = 519 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 205/524 (39%), Positives = 302/524 (57%), Gaps = 6/524 (1%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + EYSVS++S+ +K +E +V VRGE+ G SGH Y LKD+ S + Sbjct: 2 ADTPTNIAEYSVSDISFSIKRTLEDTFGYVRVRGEL-GRISRPGSGHVYLDLKDDRSVLS 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 A+IWKG K++ PE+G+E + GKITTFPG SKYQ++I++L P+G+G L+ LE RK+ Sbjct: 61 AVIWKGAAAKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDALEPAGAGALMALLEDRKR 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 KL EGLF+ + K P+P +P++I V+TSPTGAVIRDIL R+S RFPL V+++PV+VQGD Sbjct: 121 KLAAEGLFAAERKRPLPTLPRVIGVVTSPTGAVIRDILHRLSDRFPLHVLVWPVRVQGDS 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 C E+AN I N L+ G PRPD+II+ARGGGS+EDLW FNDE +VRA A S+IP+IS Sbjct: 181 CGAEVANGIRGFNALEAGGAIPRPDLIIVARGGGSLEDLWGFNDEQVVRAAAESAIPLIS 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETDWTL D AAD+RAPTPTGAAE+AVPVK L + + +L RL + + RL+ + Sbjct: 241 AVGHETDWTLIDLAADVRAPTPTGAAEIAVPVKAELMAGVDDLSRRLASGLNRLVASRRT 300 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ALP L+ R RLD LE L + H + L+ Sbjct: 301 ELRAAAAALPAPRDLLALPRQRLDFSGGNLERGLTVNTRAHRSRLQHAAALLTPMTLVRA 360 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ R+ + +Q + + + + L R + ++ + L+ Sbjct: 361 MRQGRERLDGHRQRQARAWETTIFRHRQRLEAAAGRLTSGR--LEQQLRLGTERLDGLLR 418 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+E ++ + ++L++ +YK+ L RGY ++D + +++ R+ Sbjct: 419 RLERAQQARLAEQRARLQGLEKLLKTLSYKDVLARGYALVRDAAGEPVRSAAHVSAGDRL 478 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + DG+ AI A P E+ K + +N +QG LF Sbjct: 479 SVEVADGRFEAI---AATPAEELRKSRKPKDNPAPGGTSQGSLF 519 >gi|260462651|ref|ZP_05810857.1| exodeoxyribonuclease VII, large subunit [Mesorhizobium opportunistum WSM2075] gi|259031557|gb|EEW32827.1| exodeoxyribonuclease VII, large subunit [Mesorhizobium opportunistum WSM2075] Length = 548 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 217/550 (39%), Positives = 323/550 (58%), Gaps = 23/550 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + ++ + EY+VSE+S LK VE +V VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 1 MSDAASESRTNATEYTVSEISGALKRTVEDVFGNVRVRGEISGYRGPHSSGHAYFALKDD 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +R+DA++WKGT+++++F PEEG+E + GK+TT+PG S YQI+I++L P+G+G L+ L Sbjct: 61 RARLDAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGKSNYQIVIDNLEPAGAGALMALL 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF K +PF+P++I V+TSPTG+VIRDI+ RI RFPL V+++PV+ Sbjct: 121 EERKRRLQGEGLFDAGRKRRLPFMPRVIGVVTSPTGSVIRDIIHRIKDRFPLHVLVWPVR 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ E+ NA+ N L RPD++I+ARGGGS+EDLW FNDE + RA+A S Sbjct: 181 VQGETSGVEVTNAVAGFNALAWDGAIQRPDLLIVARGGGSLEDLWGFNDEALARAVAASG 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETDWTL D AD+RAPTPTGAAE+AVPVK L+++L +L ARL ++R Sbjct: 241 IPVISAVGHETDWTLIDLVADVRAPTPTGAAEIAVPVKADLEATLASLGARLKAAVLRNF 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + K + +ALP+ DQ L+ R RLD L L + RK + + ++ Sbjct: 301 ERKRQAARAAARALPSPDQLLALPRRRLDEATSRLGRGLMVSTERKRARY--VAVKLTPT 358 Query: 361 FLIHNIQKNR----QHILEKQ--------------QHIEQIVKQHLRYIFLEKKEKIAIL 402 L I + R +++L Q + + R ++++A+L Sbjct: 359 MLSQRIAEARRTNERNLLRAQGALRALARARRAELNRAADQLPKCARASLQRHRQQLALL 418 Query: 403 HML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 E T R + L R + +++ V R+L + ++K L R Sbjct: 419 QGRITIEPTARRQRVQRDLLTALTRRGGQAMLIRLERLRGRVVQADRLLATLSHKAVLAR 478 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP-PKEQPTKKCQLHNNKR 519 G+ ++D + I Q ++A+ + + F DG A+A+ + A PK + K Sbjct: 479 GFALVKDADGAVIKQAADVASGMALSLEFADGIADAVATSGAARPKPAAKPSAKTPVAKT 538 Query: 520 EKQGTQGELF 529 + G QG LF Sbjct: 539 REPGNQGSLF 548 >gi|192289762|ref|YP_001990367.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris TIE-1] gi|192283511|gb|ACE99891.1| exodeoxyribonuclease VII, large subunit [Rhodopseudomonas palustris TIE-1] Length = 537 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 204/532 (38%), Positives = 302/532 (56%), Gaps = 7/532 (1%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + + + E++VSELS LK VE HV VRGEI+G+RG HSSGH YF+LKD ++I Sbjct: 6 TPQALANVGEFTVSELSQALKRTVEDTYGHVRVRGEITGFRGPHSSGHCYFALKDEGAKI 65 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE+L P+G G L+ +E+RK Sbjct: 66 EAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEERK 125 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 KKL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+VQG+ Sbjct: 126 KKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 185 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++IA AI N L E PRPD++I+ARGGGS+EDLW FN+E++VRA A+S IP+I Sbjct: 186 GSAEQIAAAIHGFNALPEDGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSMIPLI 245 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD TL D+A+D RAPTPT AAEMAVPV+ L + L R+ + R ++ Sbjct: 246 SAVGHETDVTLIDFASDKRAPTPTAAAEMAVPVRAELFVEVGGLARRILSSWQRGQDFRR 305 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N L + +ALP + L+ R RLD L L +R F + L Sbjct: 306 NELRAAARALPGASDLLAIPRQRLDGASAALPRALRASTNAHHRRFAAAAAGMTLKVLRA 365 Query: 365 NIQKNRQHILE---KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTHI 420 + + + + Q + +H R F ++ + +Q + RI + Sbjct: 366 QVAHSAHRLDSAGTQLQRCARATLRHRRERFDGLAVRLQASKLANQQAQRMRIAREQERL 425 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++L R L ++ V T ++L + +Y+ L RG+ ++D + + ++A Sbjct: 426 QRLGERARRALITLLERRQARVDATGKLLTALSYRGVLARGFALVRDADGRSVHAAASVA 485 Query: 481 TKTRILINFFDGQANAIVINKAPPK---EQPTKKCQLHNNKREKQGTQGELF 529 R+ + F DG+ + +P + QG LF Sbjct: 486 AGARLSVEFADGRVAVTADGGSGSPVEAAKPAPTPAKPAKRPTSPADQGSLF 537 >gi|39934236|ref|NP_946512.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris CGA009] gi|39648084|emb|CAE26604.1| putative exonuclease VII, large subunit OB-fold nucleic acid binding domain [Rhodopseudomonas palustris CGA009] Length = 537 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 205/532 (38%), Positives = 303/532 (56%), Gaps = 7/532 (1%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + + + E++VSELS LK VE HV VRGEI+G+RG HSSGH YF+LKD ++I Sbjct: 6 TPQALANVGEFTVSELSQALKRTVEDTYGHVRVRGEITGFRGPHSSGHCYFALKDEGAKI 65 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE+L P+G G L+ +E+RK Sbjct: 66 EAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEERK 125 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 KKL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+VQG+ Sbjct: 126 KKLAAEGLFDEARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 185 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++IA AI N L E PRPD++I+ARGGGS+EDLW FN+E++VRA A+S IP+I Sbjct: 186 GSAEQIAAAIHGFNALPEDGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSMIPLI 245 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD TL D+A+D RAPTPT AAEMAVPV+ L + L R+ + R ++ Sbjct: 246 SAVGHETDVTLIDFASDKRAPTPTAAAEMAVPVRAELFVEVGGLARRILSSWQRGQDFRR 305 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N L + +ALP + L+ R RLD L L +R F + L Sbjct: 306 NELRAAARALPGASDLLAIPRQRLDGASAALPRALRASTNAHHRRFAAAAAGMTLKVLRA 365 Query: 365 NIQKNRQHILE---KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTHI 420 + + + + Q + +H R F ++ + +Q + RI + Sbjct: 366 QVAHSAHRLDSAGTQLQRCARATLRHRRERFEGLAVRLQASKLANQQAQRMRIAREQERL 425 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++L R L ++ V T ++L + +Y+ L RG+ ++D + + ++A Sbjct: 426 QRLAERARRALITLLERRQARVDATGKLLTALSYRGVLARGFALVRDADGRSVHAAASVA 485 Query: 481 TKTRILINFFDGQANAIVINKAPPK---EQPTKKCQLHNNKREKQGTQGELF 529 R+ + F DG+ + +PT + QG LF Sbjct: 486 AGARLSVEFADGRVAVTADGGSGSPVEAAKPTPAPAKPVKRPPSPAGQGSLF 537 >gi|323138985|ref|ZP_08074045.1| exodeoxyribonuclease VII, large subunit [Methylocystis sp. ATCC 49242] gi|322395739|gb|EFX98280.1| exodeoxyribonuclease VII, large subunit [Methylocystis sp. ATCC 49242] Length = 522 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 200/521 (38%), Positives = 281/521 (53%), Gaps = 20/521 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + PE SVSEL+ LK +E V VRGEIS YRG H+SGHAYFSLKD +R+DA+I Sbjct: 22 GTNAPEISVSELANALKRTIEDRFGRVRVRGEISNYRGPHASGHAYFSLKDQSARLDAVI 81 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 WKGT ++ P+EG+E + G+ITTFPG S YQI+IE++ P+G G L+ L++R+KKL Sbjct: 82 WKGTFMRLRTRPQEGLEVVATGRITTFPGKSSYQIVIEAMEPAGVGALMALLDERRKKLA 141 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EGLF + K P+PF+P+++ V+TSPTGAVIRDIL R++ RFP RV+++PV+VQG+ Sbjct: 142 AEGLFDEARKRPLPFLPRVVGVVTSPTGAVIRDILHRLNDRFPRRVLVWPVRVQGETSAV 201 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+A AI N L PRPD++I+ARGGGS+EDLW FN+E++VR+ A S IP+ISAIG Sbjct: 202 EVAAAINGFNALPADGPVPRPDVLIVARGGGSLEDLWSFNEEIVVRSAAASDIPLISAIG 261 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TL D+ ADLRAPTPTGAAE AVPV+ L L RL R ++ + L Sbjct: 262 HETDTTLIDFVADLRAPTPTGAAEKAVPVRAELAEHLAARARRLAAAKTRAMEQRRTQLA 321 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 +L + LP +Q L+ R RLDR L + N + + + Sbjct: 322 TLARLLPAPEQLLANPRQRLDRAGERLRGAFRAGRDAQRLRLARAANLLARHSPQAELAR 381 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ + + Q L + + + R++ Sbjct: 382 ARERLKGLDARLAQG------------------LAARLTLARQQNQGSAQRLANAGGRLD 423 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ + R+ S ++K L RG+ ++D + + T + I Sbjct: 424 RAFVTLLRQKKEKLERLGRLQDSLSHKAVLARGFALVRDEKDALVRGVAQAPPGTALSIE 483 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 F DG+ +A A PT K+ QG LF Sbjct: 484 FADGRIDAR-AGNAATGPAPTVPAPRKRAKKPGD-DQGSLF 522 >gi|149914435|ref|ZP_01902966.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. AzwK-3b] gi|149811954|gb|EDM71787.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. AzwK-3b] Length = 530 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 187/534 (35%), Positives = 290/534 (54%), Gaps = 9/534 (1%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PE+SVSE+S +K ++E +H+ V+GE+ G SGH Y LK Sbjct: 1 MSDLIDDPMEGENAPEFSVSEISGAVKRVIEGEFAHIRVKGEV-GRVSRPRSGHVYLDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S + +IWKG +++ PEEG+E + G++TTFPG S+YQI+IE + P+G G L+ Sbjct: 60 DDRSVLAGVIWKGVASRLSVQPEEGMEVVATGRLTTFPGQSRYQIVIEDIKPAGMGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRK +L EGLF+ + K P+P++P++I V+TSP+GAVIRDIL R+ RFP +V+I+P Sbjct: 120 MLEKRKTQLAAEGLFAPERKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG++C E+ AI N L G PRPD++I+ARGGGSIEDLW FN+E +VRA A Sbjct: 180 VAVQGEKCAPEVTRAIQGFNRLSPGGALPRPDLLIVARGGGSIEDLWGFNEESVVRAAAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+AAD RAPTPT AAE+AVPV+ L + + EAR+ + + Sbjct: 240 SEIPLISAVGHETDTTLIDFAADQRAPTPTAAAELAVPVRMDLLAWVDKQEARMTHALTS 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L +ALP ++ L R RLD L L + + ++ Sbjct: 300 GVTARGQRLRDLARALPRPERLLDTPRQRLDAWSDRLPAALTRTVQARRVRLFEASGALR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + R+ L + + +++ + ++ L + + I Sbjct: 360 PGALQSRLASRREMFLSWEARLAPALQRMVDRKRETLDRRLDRLSLRP--IERDIARKSE 417 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + ++ R+ +++ ++ R+ ++ YK TL+RGY ++ + + +T + Sbjct: 418 QLDRVARRLSDAGDRQLRGWRERINAMDRLRETLGYKATLQRGYAVVRG-DGDVVTTRAA 476 Query: 479 LATKTRILINFFDGQ--ANAIVINKAPPKEQPT-KKCQLHNNKREKQGTQGELF 529 + I F DG+ + A K + + QG LF Sbjct: 477 ALGAQALEIEFADGRMPVGGAPDDGAAQDRTLAEKPVKKPGKRPSDPPDQGSLF 530 >gi|254502889|ref|ZP_05115040.1| exodeoxyribonuclease VII, large subunit [Labrenzia alexandrii DFL-11] gi|222438960|gb|EEE45639.1| exodeoxyribonuclease VII, large subunit [Labrenzia alexandrii DFL-11] Length = 540 Score = 435 bits (1118), Expect = e-119, Method: Composition-based stats. Identities = 199/524 (37%), Positives = 292/524 (55%), Gaps = 3/524 (0%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + E+SVSE+S+ +K +E +V VRGE+ G SGH Y LKD+ + + Sbjct: 20 ADTPSNVAEFSVSEISFSIKRTMEDAFGYVRVRGEL-GRISRPGSGHIYLDLKDDRAVLS 78 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +IW+G +K++ PE+G+E + GKITTFPG SKYQ++I++L P+G+G L+ LE+RKK Sbjct: 79 GVIWRGVASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDALEPAGAGALMALLEERKK 138 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 KL EGLF+++ K P+P +P +I V+TSPTGAVIRDIL RIS RFP+ V+++PV+VQG+ Sbjct: 139 KLAAEGLFAEERKRPLPSLPNVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVRVQGET 198 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E+AN I N + G T PRPD++I+ARGGGSIEDLW FN+E +VRA A S IP+IS Sbjct: 199 SGAEVANGIRGFNAFQTGGTIPRPDLVIVARGGGSIEDLWGFNEEAVVRAAAESQIPLIS 258 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETDWTL D AADLRAPTPTGAAE+AVPVK L S + + RL+ + R + + Sbjct: 259 AVGHETDWTLIDLAADLRAPTPTGAAEIAVPVKAELMSMVDDRARRLSTGLQRFVGSRRT 318 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ALP L+ R R D LE L + + + R+ L Sbjct: 319 ELRAASAALPAPRDLLALPRQRFDTAANSLERGLIVNTKHHRSTYQNASARLSPIVLTRL 378 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 K RQ +L ++ + + +A L R + L Sbjct: 379 STKARQDLLVAGDRQQRALSVGIAQKRQAFDAIVARLTPSR--LSQHTALSKERVTGLGD 436 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R++ ++K + ++L+S +YK+ L RGY ++D + I + T + Sbjct: 437 RLDRAYLTQLKDSAAKLDGLQKLLKSLSYKDVLARGYAVVRDADGQPIRSTSAVETGAAL 496 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + DG +A+ ++ + ++P + QG LF Sbjct: 497 SVELADGTLDAVAMSGSSAPKKPKTTGPKKAASHKPAADQGNLF 540 >gi|315122013|ref|YP_004062502.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495415|gb|ADR52014.1| exodeoxyribonuclease VII large subunit [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 533 Score = 434 bits (1115), Expect = e-119, Method: Composition-based stats. Identities = 379/533 (71%), Positives = 445/533 (83%), Gaps = 4/533 (0%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN QKNSL PEYSVSELSYHLK+ VES +V VRGEISGYRGIH+SGHAYFSLKDN Sbjct: 1 MNSSPQKNSLTLPEYSVSELSYHLKNTVESKFPYVFVRGEISGYRGIHASGHAYFSLKDN 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 SRIDA+IWKGTL+KIE PEEGIEFL +GKITTFPGSSKYQIIIESLIPSGSG L+T L Sbjct: 61 KSRIDAVIWKGTLSKIEHPPEEGIEFLALGKITTFPGSSKYQIIIESLIPSGSGALMTIL 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RKKKL EE LFSD++KNPIPF+PK IAVITSPTGAVIRDILQRISCRFP+RVI+FP K Sbjct: 121 EERKKKLREEELFSDKYKNPIPFMPKNIAVITSPTGAVIRDILQRISCRFPVRVIVFPAK 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGDECP+EI NAI+QLN LKE CPRPDIIILARGGGSIEDLWHFNDE IVRAIANSS Sbjct: 181 VQGDECPREIVNAIIQLNGLKEESICPRPDIIILARGGGSIEDLWHFNDETIVRAIANSS 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IPIISAIGHETDWTL+DYAADLRAPTPTGAAEMAVPVK L SSL +LE+RLN+ I+RL Sbjct: 241 IPIISAIGHETDWTLSDYAADLRAPTPTGAAEMAVPVKHLLTSSLKSLESRLNHSIVRLT 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 K K+N LNSL+K LPNSDQ LSC RY+LDRL RELEHNLEIIIFRK R+FN+ I RIKSD Sbjct: 301 KNKVNCLNSLIKILPNSDQILSCPRYQLDRLSRELEHNLEIIIFRKCRYFNNTIIRIKSD 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 +HNIQK RQ+I++KQ++IE ++Q+LR I L+ ++K +LHML EQTK+RI LH HI Sbjct: 361 VPMHNIQKYRQNIIKKQEYIEHQIEQYLRCIHLKTQQKGTMLHMLCEQTKSRITRLHAHI 420 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K I RIE +LS+KI++CHTS+S RIL+S A++N LKRGY++I+D NNN +T+ L+ Sbjct: 421 KDSINRIELMLSYKIQNCHTSISTPNRILKSLAHRNILKRGYSTIRDLNNNLLTKTNKLS 480 Query: 481 TKTRILINFFDGQANAIVINKA----PPKEQPTKKCQLHNNKREKQGTQGELF 529 T ILI+FF+GQA+AI+ NK P +++ T+K + ++ K++ QG LF Sbjct: 481 AGTNILIDFFEGQASAIITNKNHSVLPIEKKYTRKRKDNSQKKKNHEDQGSLF 533 >gi|294853461|ref|ZP_06794133.1| exodeoxyribonuclease VII [Brucella sp. NVSL 07-0026] gi|294819116|gb|EFG36116.1| exodeoxyribonuclease VII [Brucella sp. NVSL 07-0026] Length = 513 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 310/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 6 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 66 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 126 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + ++A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 306 QKRQAHRAAVRAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 365 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 484 GDALSVRFRDGDVGVV 499 >gi|225686532|ref|YP_002734504.1| exodeoxyribonuclease VII large subunit [Brucella melitensis ATCC 23457] gi|256262331|ref|ZP_05464863.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 2 str. 63/9] gi|254783692|sp|C0RLR7|EX7L_BRUMB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|225642637|gb|ACO02550.1| exodeoxyribonuclease VII, large subunit [Brucella melitensis ATCC 23457] gi|263092059|gb|EEZ16356.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 2 str. 63/9] gi|326410913|gb|ADZ67977.1| exodeoxyribonuclease VII large subunit [Brucella melitensis M28] gi|326554204|gb|ADZ88843.1| exodeoxyribonuclease VII large subunit [Brucella melitensis M5-90] Length = 511 Score = 432 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 212/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + I F DG + Sbjct: 482 GDALSIRFRDGDVGVV 497 >gi|17988872|ref|NP_541505.1| exodeoxyribonuclease VII large subunit [Brucella melitensis bv. 1 str. 16M] gi|225629238|ref|ZP_03787271.1| exodeoxyribonuclease VII, large subunit [Brucella ceti str. Cudo] gi|261216208|ref|ZP_05930489.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 3 str. Tulya] gi|17984697|gb|AAL53769.1| exodeoxyribonuclease vii large subunit [Brucella melitensis bv. 1 str. 16M] gi|225615734|gb|EEH12783.1| exodeoxyribonuclease VII, large subunit [Brucella ceti str. Cudo] gi|260917815|gb|EEX84676.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 3 str. Tulya] Length = 513 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 6 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 66 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 126 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 306 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 365 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 484 GDALSVRFRDGDVGVV 499 >gi|254695790|ref|ZP_05157618.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 3 str. Tulya] gi|254705758|ref|ZP_05167586.1| exodeoxyribonuclease VII large subunit [Brucella pinnipedialis M163/99/10] gi|254710990|ref|ZP_05172801.1| exodeoxyribonuclease VII large subunit [Brucella pinnipedialis B2/94] gi|256029372|ref|ZP_05442986.1| exodeoxyribonuclease VII large subunit [Brucella pinnipedialis M292/94/1] gi|256043639|ref|ZP_05446564.1| exodeoxyribonuclease VII large subunit [Brucella melitensis bv. 1 str. Rev.1] gi|256111324|ref|ZP_05452350.1| exodeoxyribonuclease VII large subunit [Brucella melitensis bv. 3 str. Ether] gi|256157564|ref|ZP_05455482.1| exodeoxyribonuclease VII large subunit [Brucella ceti M490/95/1] gi|256253461|ref|ZP_05458997.1| exodeoxyribonuclease VII large subunit [Brucella ceti B1/94] gi|260167540|ref|ZP_05754351.1| exodeoxyribonuclease VII large subunit [Brucella sp. F5/99] gi|260564829|ref|ZP_05835314.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1 str. 16M] gi|261220588|ref|ZP_05934869.1| exodeoxyribonuclease 7 large subunit [Brucella ceti B1/94] gi|261313179|ref|ZP_05952376.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis M163/99/10] gi|261318571|ref|ZP_05957768.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis B2/94] gi|261756959|ref|ZP_06000668.1| exodeoxyribonuclease 7 large subunit [Brucella sp. F5/99] gi|265986371|ref|ZP_06098928.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis M292/94/1] gi|265990059|ref|ZP_06102616.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1 str. Rev.1] gi|265992830|ref|ZP_06105387.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 3 str. Ether] gi|265996065|ref|ZP_06108622.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M490/95/1] gi|31563442|sp|Q8YCK1|EX7L_BRUME RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|260152472|gb|EEW87565.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1 str. 16M] gi|260919172|gb|EEX85825.1| exodeoxyribonuclease 7 large subunit [Brucella ceti B1/94] gi|261297794|gb|EEY01291.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis B2/94] gi|261302205|gb|EEY05702.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis M163/99/10] gi|261736943|gb|EEY24939.1| exodeoxyribonuclease 7 large subunit [Brucella sp. F5/99] gi|262550362|gb|EEZ06523.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M490/95/1] gi|262763700|gb|EEZ09732.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 3 str. Ether] gi|263000728|gb|EEZ13418.1| exodeoxyribonuclease 7 large subunit [Brucella melitensis bv. 1 str. Rev.1] gi|264658568|gb|EEZ28829.1| exodeoxyribonuclease 7 large subunit [Brucella pinnipedialis M292/94/1] Length = 511 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|161620822|ref|YP_001594708.1| exodeoxyribonuclease VII large subunit [Brucella canis ATCC 23365] gi|254703100|ref|ZP_05164928.1| exodeoxyribonuclease VII large subunit [Brucella suis bv. 3 str. 686] gi|260567971|ref|ZP_05838440.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 4 str. 40] gi|261753717|ref|ZP_05997426.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 3 str. 686] gi|189037854|sp|A9MC50|EX7L_BRUC2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|161337633|gb|ABX63937.1| exodeoxyribonuclease VII, large subunit [Brucella canis ATCC 23365] gi|260154636|gb|EEW89717.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 4 str. 40] gi|261743470|gb|EEY31396.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 3 str. 686] Length = 511 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERQTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|62317398|ref|YP_223251.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 1 str. 9-941] gi|83269378|ref|YP_418669.1| exodeoxyribonuclease VII large subunit [Brucella melitensis biovar Abortus 2308] gi|189022653|ref|YP_001932394.1| exodeoxyribonuclease VII large subunit [Brucella abortus S19] gi|254690900|ref|ZP_05154154.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 6 str. 870] gi|254698681|ref|ZP_05160509.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 2 str. 86/8/59] gi|254732128|ref|ZP_05190706.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 4 str. 292] gi|256256085|ref|ZP_05461621.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 9 str. C68] gi|260544636|ref|ZP_05820457.1| exonuclease VII [Brucella abortus NCTC 8038] gi|260882304|ref|ZP_05893918.1| exodeoxyribonuclease 7 large subunit [Brucella abortus bv. 9 str. C68] gi|297249439|ref|ZP_06933140.1| exodeoxyribonuclease VII, large subunit [Brucella abortus bv. 5 str. B3196] gi|81309307|sp|Q578P4|EX7L_BRUAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|123546037|sp|Q2YL15|EX7L_BRUA2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694639|sp|B2SAR1|EX7L_BRUA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|62197591|gb|AAX75890.1| XseA, exodeoxyribonuclease VII, large subunit [Brucella abortus bv. 1 str. 9-941] gi|82939652|emb|CAJ12641.1| Exonuclease VII, large subunit:OB-fold nucleic acid binding domain [Brucella melitensis biovar Abortus 2308] gi|189021227|gb|ACD73948.1| Exonuclease VII, large subunit [Brucella abortus S19] gi|260097907|gb|EEW81781.1| exonuclease VII [Brucella abortus NCTC 8038] gi|260871832|gb|EEX78901.1| exodeoxyribonuclease 7 large subunit [Brucella abortus bv. 9 str. C68] gi|297173308|gb|EFH32672.1| exodeoxyribonuclease VII, large subunit [Brucella abortus bv. 5 str. B3196] Length = 511 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPTLKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|237816952|ref|ZP_04595944.1| exodeoxyribonuclease VII, large subunit [Brucella abortus str. 2308 A] gi|260756483|ref|ZP_05868831.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 6 str. 870] gi|260759915|ref|ZP_05872263.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 4 str. 292] gi|260763153|ref|ZP_05875485.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 2 str. 86/8/59] gi|237787765|gb|EEP61981.1| exodeoxyribonuclease VII, large subunit [Brucella abortus str. 2308 A] gi|260670233|gb|EEX57173.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 4 str. 292] gi|260673574|gb|EEX60395.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 2 str. 86/8/59] gi|260676591|gb|EEX63412.1| exodeoxyribonuclease VII large subunit [Brucella abortus bv. 6 str. 870] Length = 513 Score = 431 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 6 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 66 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 126 ERKQRLAAEGLFDPTLKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 306 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 365 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 484 GDALSVRFRDGDVGVV 499 >gi|83309311|ref|YP_419575.1| exonuclease VII large subunit [Magnetospirillum magneticum AMB-1] gi|82944152|dbj|BAE49016.1| Exonuclease VII large subunit [Magnetospirillum magneticum AMB-1] Length = 688 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 194/528 (36%), Positives = 296/528 (56%), Gaps = 26/528 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ ++ + PEYSVSELS L+ VE S V VRGEISG++ HSSGH YF+LKD Sbjct: 186 MSDEARPAPSNVPEYSVSELSGSLRKTVEDAFSFVRVRGEISGFK-RHSSGHLYFALKDA 244 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + +DA+ W+G+ K+ PE+G+E + G++TT+PG SKYQ+++E + +G G LL L Sbjct: 245 DAVLDAVCWRGSAGKLAIGPEDGMEVVATGRLTTYPGRSKYQMVVERMELAGQGALLKML 304 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E RKK+L+ EGLF K PIPF+P++I V+TSPTGAVIRDIL R++ RFP RV+++PV Sbjct: 305 EDRKKRLMAEGLFDTAKKRPIPFLPEVIGVVTSPTGAVIRDILHRLAERFPRRVLLWPVA 364 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD ++A AI N LK G PRPD++I+ARGGGS+EDL FN+E++VRA A S Sbjct: 365 VQGDGASAQVAAAIRGFNALKPGGAVPRPDVLIVARGGGSLEDLMAFNEEIVVRAAAESE 424 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+DLRAPTPT AAE AVPV+ L +++ ++ ARL + R + Sbjct: 425 IPLISAVGHETDTTLIDFASDLRAPTPTAAAEKAVPVRAELIATVADMGARLIGAMQRGL 484 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L +ALP+ + + RLD L + +++ R+ + + R++ Sbjct: 485 EERRTRLGHTFRALPHPRRVMEDCARRLDERAERLTNAPRLLLERRRAELDRLAARLR-- 542 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + + ++ +K + + + Sbjct: 543 HPREQLAEAGHKLTALTTRLDHAMKTVSAAERAANERRTL------------------QL 584 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ R+ + + V+ ++L+SF+Y+ L+RG+ ++D + +T Sbjct: 585 EQCAGRLIQAMPRLLDEKAKRVAHAGQLLESFSYRKVLERGFAVVRDEHGTPVTSVAAAK 644 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + + F DG+A V A P + H G QG L Sbjct: 645 PGAALAVEFADGKAGVRVEGTAAP-----PAPKPHRKPATPDGRQGSL 687 >gi|254699977|ref|ZP_05161805.1| exodeoxyribonuclease VII large subunit [Brucella suis bv. 5 str. 513] Length = 511 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAVSRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|261750459|ref|ZP_05994168.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 5 str. 513] gi|261740212|gb|EEY28138.1| exodeoxyribonuclease 7 large subunit [Brucella suis bv. 5 str. 513] Length = 513 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 6 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 66 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 126 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 185 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 186 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 245 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 246 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 305 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 306 QKRQAHRAAARAMPSADQLLALPRRRFDEAVSRLTRALFVNTQKKRVHFDGHARQLSPRL 365 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 366 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 423 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 424 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 483 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 484 GDALSVRFRDGDVGVV 499 >gi|256015528|ref|YP_003105537.1| exodeoxyribonuclease VII large subunit [Brucella microti CCM 4915] gi|255998188|gb|ACU49875.1| exodeoxyribonuclease VII large subunit [Brucella microti CCM 4915] Length = 511 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|306845981|ref|ZP_07478548.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO1] gi|306273616|gb|EFM55461.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO1] Length = 511 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 208/496 (41%), Positives = 306/496 (61%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEIS YRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISDYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G++ ++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMGRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ N L + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVAMAVNGFNALPDHGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ++L + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQAALASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|90426092|ref|YP_534462.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris BisB18] gi|90108106|gb|ABD90143.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris BisB18] Length = 541 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 206/543 (37%), Positives = 306/543 (56%), Gaps = 16/543 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M P + + PE++V+ELS LK VE HV VRGEISG+RG HSSGH YF+LKD Sbjct: 1 MPPTTAALP-NSPEFTVTELSSALKRTVEDAYGHVRVRGEISGFRGPHSSGHCYFALKDE 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE++ P+G G L+ + Sbjct: 60 GAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALM 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK+KL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PVK Sbjct: 120 EERKRKLGAEGLFDEARKQLLPYLPEVIGVVTSPTGAVIRDILHRLQDRFPRRVLVWPVK 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD ++IA AI N L EG + PRPD++I+ARGGGS+EDLW FN+E++VRA A+S Sbjct: 180 VQGDGSAEQIAAAIHGFNALPEGGSIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAADSM 239 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L R R Sbjct: 240 IPLISAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRAELFVEVGQLGHRAMLCFQRGQ 299 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + L + +ALP++ L+ R RLD L L +R F + Sbjct: 300 ERRRSELRAATRALPSAAALLAIPRQRLDGAAAALPRALRANSHAHHRRFATACAGLTLK 359 Query: 361 FLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 L + Q + + ++ + + R+ L+ + K + L ++ Q + + Sbjct: 360 VLRAQVAHATQRLAVNGERLKHCARAGLRHRRDRFAALDARFKASKLANVQAQ-RKALAR 418 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 ++L R L ++ V+ ++L + +Y+ L RG+ ++D + Sbjct: 419 DRERTQRLAERARRALLIALQRQQARVASCGQLLGALSYRGVLARGFALVRDAQGLAVHA 478 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQP---------TKKCQLHNNKREKQGTQG 526 + R+ + F DG+ A ++ + + K QG Sbjct: 479 AAAIDPGARLSLEFADGRIGATADGESAAAPRSKPAAKPATAKPASTTTAKRVSKSVDQG 538 Query: 527 ELF 529 LF Sbjct: 539 SLF 541 >gi|256059060|ref|ZP_05449269.1| exodeoxyribonuclease VII large subunit [Brucella neotomae 5K33] gi|261323005|ref|ZP_05962202.1| exodeoxyribonuclease 7 large subunit [Brucella neotomae 5K33] gi|261298985|gb|EEY02482.1| exodeoxyribonuclease 7 large subunit [Brucella neotomae 5K33] Length = 511 Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGLIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|163844893|ref|YP_001622548.1| exodeoxyribonuclease VII large subunit [Brucella suis ATCC 23445] gi|189037853|sp|A9WZ60|EX7L_BRUSI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|163675616|gb|ABY39726.1| exodeoxyribonuclease VII, large subunit [Brucella suis ATCC 23445] Length = 511 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 210/496 (42%), Positives = 308/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + RPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPILRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|23500501|ref|NP_699941.1| exodeoxyribonuclease VII large subunit [Brucella suis 1330] gi|31563165|sp|Q8FVR1|EX7L_BRUSU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|23464131|gb|AAN33946.1| exodeoxyribonuclease VII, large subunit [Brucella suis 1330] Length = 511 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 308/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q + Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVLP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|254720127|ref|ZP_05181938.1| exodeoxyribonuclease VII large subunit [Brucella sp. 83/13] gi|265985133|ref|ZP_06097868.1| exodeoxyribonuclease 7 large subunit [Brucella sp. 83/13] gi|306839035|ref|ZP_07471855.1| exodeoxyribonuclease VII, large subunit [Brucella sp. NF 2653] gi|264663725|gb|EEZ33986.1| exodeoxyribonuclease 7 large subunit [Brucella sp. 83/13] gi|306405858|gb|EFM62117.1| exodeoxyribonuclease VII, large subunit [Brucella sp. NF 2653] Length = 511 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 209/496 (42%), Positives = 307/496 (61%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G++ ++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMGRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PL VI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLGVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ N L + + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNALPDDGSIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ++L + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQAALASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ F Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRF 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++ + +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMSTLSYESVLERGFAVVFDAQGKPVKQAGAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GDALSVRFRDGDVGVV 497 >gi|91978566|ref|YP_571225.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris BisB5] gi|91685022|gb|ABE41324.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris BisB5] Length = 536 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 205/532 (38%), Positives = 308/532 (57%), Gaps = 6/532 (1%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + E++VSELS LK VE + HV VRGEISG+RG HSSGH YF+LKD ++ Sbjct: 5 LAPETLANVGEFTVSELSQALKRTVEDSYGHVRVRGEISGFRGAHSSGHCYFALKDESAK 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE+L P+G G L+ +E+R Sbjct: 65 IEAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 KKKL EGLF + K +P++P +I V+TSPTGAVIRDIL R+ RFP RV+++PVKVQG Sbjct: 125 KKKLGAEGLFDEARKQLLPWLPDVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVKVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +++A AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+ Sbjct: 185 EGSAEQVAAAIHGFNALPEGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAESMIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + + R+ R + Sbjct: 245 ISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRAELFVEVQSFSRRMMLCWTRGQDSR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 N L + +ALP + + L+ R RLD L L +R F I + L Sbjct: 305 RNELRAAARALPAASELLAIPRQRLDTAAAGLPRALRANTHAHHRRFAKAAAGITLNVLR 364 Query: 364 HNIQKNRQHILEKQQHIE---QIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTH 419 + + Q + + ++ + +H R F ++ + EQ + +I Sbjct: 365 AQVSHSAQRLGITGERLKHGARATLRHRRDRFDGLAIRLQASKLANEQAQRMQIARERER 424 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 +++L R L+ + ++ + ++L + +Y+ L RG+ ++D + + + + Sbjct: 425 MQRLAERARRALTTLLDRQQARLTQSGKLLTALSYRGVLARGFALVRDADGHAVHAAAAV 484 Query: 480 ATKTRILINFFDGQANAIVINKAP--PKEQPTKKCQLHNNKREKQGTQGELF 529 + ++ + F DG+ + P + T + + K QG LF Sbjct: 485 SAGAQLSVEFADGRVSVTADGGHAGEPAKPTTPASKPTQKRTPKPVDQGSLF 536 >gi|254712538|ref|ZP_05174349.1| exodeoxyribonuclease VII large subunit [Brucella ceti M644/93/1] gi|254715610|ref|ZP_05177421.1| exodeoxyribonuclease VII large subunit [Brucella ceti M13/05/1] gi|261217358|ref|ZP_05931639.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M13/05/1] gi|261320231|ref|ZP_05959428.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M644/93/1] gi|260922447|gb|EEX89015.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M13/05/1] gi|261292921|gb|EEX96417.1| exodeoxyribonuclease 7 large subunit [Brucella ceti M644/93/1] Length = 511 Score = 428 bits (1100), Expect = e-117, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 GNALSVRFRDGDVGVV 497 >gi|148557887|ref|YP_001257710.1| exodeoxyribonuclease VII large subunit [Brucella ovis ATCC 25840] gi|158513787|sp|A5VV55|EX7L_BRUO2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|148369172|gb|ABQ62044.1| exodeoxyribonuclease VII, large subunit [Brucella ovis ATCC 25840] Length = 511 Score = 428 bits (1099), Expect = e-117, Method: Composition-based stats. Identities = 211/496 (42%), Positives = 309/496 (62%), Gaps = 2/496 (0%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + S + EYSVSE+S LK VE HV VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 4 DSSFPGASSNVAEYSVSEISGALKRTVEDMFGHVRVRGEISGYRGPHSSGHAYFALKDDR 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R++A+IW+G+++++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE Sbjct: 64 ARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+V Sbjct: 124 ERKQRLAAEGLFDPALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+A A+ NTL + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S I Sbjct: 184 QGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETDWTL D AAD+RAPTPTGAAEMAVPVK LQ+SL + ARL++ + R Sbjct: 244 PVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + +A+P++DQ L+ R R D L L + +K HF+ ++ Sbjct: 304 QKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRL 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + + + Q + + ++ LR + L E R + ++ Sbjct: 364 LQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLE 421 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +L R + + I+ R++++ +Y++ L+RG+ + D + Q ++ Sbjct: 422 QLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSP 481 Query: 482 KTRILINFFDGQANAI 497 + + F DG + Sbjct: 482 DDALSVRFRDGDVGVV 497 >gi|126729213|ref|ZP_01745027.1| exodeoxyribonuclease VII, large subunit [Sagittula stellata E-37] gi|126710203|gb|EBA09255.1| exodeoxyribonuclease VII, large subunit [Sagittula stellata E-37] Length = 513 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 185/529 (34%), Positives = 289/529 (54%), Gaps = 16/529 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + + PE+SVSELS +K ++E V VRGE+ G SGH Y LKD+ Sbjct: 1 MDLIDDGTNGNTPEFSVSELSGAVKRVIEGEFGFVRVRGEV-GRVSRPRSGHVYLDLKDD 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S I ++WKG ++++ PEEG+E + G++TTFPG SKYQI++E + P+G+G L+ L Sbjct: 60 RSVISGVMWKGVASRLQTQPEEGMEVVATGRLTTFPGQSKYQIVLEDIRPAGAGALMAML 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRK L EGLF K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+I+PV Sbjct: 120 EKRKAALAAEGLFDAGRKKPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+A AI N + G T PRPD++I+ARGGGS+EDLW FN+E++ RA A S Sbjct: 180 VQGAACAPEVARAIEGFNRFQPGGTLPRPDLLIVARGGGSVEDLWGFNEEVVARAAAASH 239 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTP+ AAE+AVPV+ L + + + AR+ + + Sbjct: 240 IPLISAVGHETDTTLIDFVSDRRAPTPSAAAELAVPVRMELAAQIRDFGARMTRAMGLRV 299 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 +++ L L +ALP ++ + R RLD + L L + R+ + ++ Sbjct: 300 EHRGQRLRDLARALPRPEELVEGPRQRLDVMGDRLPAALTRAVDRQRLRLTETVGSLRPA 359 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L + R + E+ + + + ++ + + A L I + Sbjct: 360 ILRRAVSVERGRMDERSARLGPALARAVKVRRDTLEARAARLSP--RAILRDIGTGRERL 417 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +L R++ + +I+ + R+ ++ +Y+ TL+RG+ + + +T + Sbjct: 418 DRLSQRLDAAQAARIQDTRQRLEALARLAETLSYRATLERGFAVVWSDSG-VVTSRAAAD 476 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 T + + F DG+ + + K QG LF Sbjct: 477 EATGLEVEFSDGRM------------KLGGAAPARRKAKRKPPEQGSLF 513 >gi|158424009|ref|YP_001525301.1| exodeoxyribonuclease VII large subunit [Azorhizobium caulinodans ORS 571] gi|172047959|sp|A8I6A9|EX7L_AZOC5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158330898|dbj|BAF88383.1| exodeoxyribonuclease VII large subunit [Azorhizobium caulinodans ORS 571] Length = 537 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 199/533 (37%), Positives = 296/533 (55%), Gaps = 7/533 (1%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + + + PE++VSELS+ L+ VE HV VRGEISGYRG HSSGHAYFS+KD Sbjct: 6 MTDLPETRA-NAPEWTVSELSFALRRTVEDAYGHVRVRGEISGYRGPHSSGHAYFSIKDE 64 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +R+DA+IWK +++ PEEG+E + +GK+TT+PG S YQI+IESL +G+G ++ L Sbjct: 65 GARLDAVIWKSAFARLKLRPEEGLEVVAVGKLTTYPGKSGYQIVIESLEFAGAGAIMAML 124 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF K +PF+PK+I V+TSPTGAVIRDIL R+S RFP +VI++PV+ Sbjct: 125 EERKRRLAAEGLFDAARKQELPFLPKVIGVVTSPTGAVIRDILHRLSDRFPRQVIVWPVR 184 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ E+A AI N L EG PRPD++I+ARGGGS+EDL F+DE +VRA A S Sbjct: 185 VQGETSAAEVAEAIRGFNALPEGGPIPRPDVLIVARGGGSLEDLLGFSDEAVVRAAAESF 244 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP++SA+GHETD TL D+AAD+RAPTPT AAEM VPV+ L + + RL+ RL+ Sbjct: 245 IPLVSAVGHETDVTLIDFAADVRAPTPTAAAEMVVPVRADLLAGIDAYGERLSAAPRRLL 304 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + +L + LP +D L+ R RLD L L F + R + Sbjct: 305 ERRRADFRALARHLPTADALLAVPRQRLDAAGERLPRALRANAAAHRLAFEAVRTRHSAS 364 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYL 416 + + + + ++ + + A R + + Sbjct: 365 AFRLRLARAQDRVAALGGRLQWGLTGLVSRRSERLSAMTARFGSARAASLRAHVLHLSRC 424 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 + L TR + + H ++ ++ ++L++ +Y+ L RG+ ++D + Sbjct: 425 RERLSVLSTRAQRAVRHDLRERTNRLAAMEQLLKALSYRGVLARGFALVRDAQGGAVRAA 484 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + R+ + F DG+ + + P E P + + Q LF Sbjct: 485 GAVVPGARLELEFADGRLGVQALGEGAPVEPPQAARPSKGARTK--AAQPSLF 535 >gi|114705932|ref|ZP_01438835.1| exodeoxyribonuclease VII large subunit protein [Fulvimarina pelagi HTCC2506] gi|114538778|gb|EAU41899.1| exodeoxyribonuclease VII large subunit protein [Fulvimarina pelagi HTCC2506] Length = 532 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 206/532 (38%), Positives = 298/532 (56%), Gaps = 5/532 (0%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + E++VSE+S LK VE HV VRGE+SGYRG HSSGHAYF+LKD+ Sbjct: 1 MSLLDNDPPSNVAEFTVSEISISLKRTVEDAFGHVRVRGEVSGYRGPHSSGHAYFALKDD 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +RIDA+IW+G+ + + F P+EG+E + G++TT+PGSSKYQI+IE + P+G+G L+ L Sbjct: 61 KARIDAVIWRGSFSNLAFKPQEGLEIIATGRLTTYPGSSKYQIVIEDIKPAGAGALMALL 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 ++R++KL EGLF+ + K +PF+P++I V+TSPTGAVIRDI RI+ RFP+ V+++PVK Sbjct: 121 DERRRKLEAEGLFAPERKKRLPFLPRVIGVVTSPTGAVIRDIRHRITDRFPVHVLVWPVK 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +A AI N + PRPD++I+ARGGGS+EDLW FNDE +VRA A+S Sbjct: 181 VQGEGSGDAVARAITGFNAFEPDGPIPRPDVLIVARGGGSLEDLWGFNDEAVVRAAADSD 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETDWTL D+ AD RAPTPTGAAE+AVPV+ L + + AR N I R + Sbjct: 241 IPLISAVGHETDWTLIDHVADRRAPTPTGAAEIAVPVRAELLADVAAFHARQGNAISRRL 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + +ALP+ D L+ R RLD L +++ + F + R+ Sbjct: 301 DHDRRQVVQTARALPSPDMLLALPRRRLDDAASGLGSQFLLVVSESRQTFGGVAARLSLS 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L I++ R + EQ + L + A L + K R + Sbjct: 361 TLEGAIREKRGSLRHAALEAEQAMAGRLSRQRQLFQRITANLQPIG--LKARSEAARLKL 418 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + R + + + + T R+ K L+RGYT I+ + IT L Sbjct: 419 DTVSERFDRARTRLTEDRRERLRQTWRVASGLGPKRVLERGYTIIRGEGDVPITDPALLP 478 Query: 481 TKTRILINFF-DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT--QGELF 529 T + F + + A+ +A P + + QG LF Sbjct: 479 PGTAFAVEFAGNNRIGALASGEAAPGSTRPAAPRKRKKATPPEAERAQGSLF 530 >gi|84499997|ref|ZP_00998263.1| exodeoxyribonuclease VII, large subunit [Oceanicola batsensis HTCC2597] gi|84391931|gb|EAQ04199.1| exodeoxyribonuclease VII, large subunit [Oceanicola batsensis HTCC2597] Length = 521 Score = 425 bits (1092), Expect = e-116, Method: Composition-based stats. Identities = 189/522 (36%), Positives = 292/522 (55%), Gaps = 17/522 (3%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + E++VSELS +K +ES HV VR E+ G SGH YF LKD+ + + A+ WK Sbjct: 14 NAHEFTVSELSGAVKRAIESGFGHVRVRAEV-GRVSRPRSGHMYFDLKDDRAVLSAVSWK 72 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + +++ PEEG+E + G++TTFPG SKYQ+I++++ P+G+G L+ LEKRK L E Sbjct: 73 GQVARMQVQPEEGMEVIATGRMTTFPGQSKYQLIVDNVEPAGAGALMALLEKRKAMLRAE 132 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF+ + K P+P++P+++ V+TSP+GAVIRDIL R+ RFP+ V+I+PV VQG C E+ Sbjct: 133 GLFAAERKRPLPYLPRVVGVVTSPSGAVIRDILHRLRDRFPVHVLIWPVAVQGQTCAAEV 192 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + AI N L PRPD++I+ARGGGSIEDLW FN+E++ RA A+S IP+ISA+GHE Sbjct: 193 SRAIAGFNRLSPAGAVPRPDLLIVARGGGSIEDLWGFNEEIVARAAASSEIPLISAVGHE 252 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TL D+ +D RAPTPT AAE+AVPV+ L + ++ ARL + I + L+ L Sbjct: 253 TDTTLIDFVSDRRAPTPTAAAELAVPVRAELTGWVADMRARLIRAQGQAILSRRQRLSDL 312 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 +ALP ++ +R +LD L + L + + + ++ L I ++R Sbjct: 313 ARALPRPERLTETARQKLDTWGERLPNALRRGVAARRVALSDCSGALRPGLLRRRIAEDR 372 Query: 371 QHILEKQQHIEQIVK---QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 Q + ++ + + R F ++ + RE + R ++KL R Sbjct: 373 QRVADRGARLPSSMTRNVMQHRRQFETCAARLQPATLRRETLRQR-----EALEKLANRF 427 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 ++S ++ R+ ++ Y+ TL RGY ++D N +T+K + I Sbjct: 428 AEAARRSVESRRDRLATLDRLRETLGYRETLARGYAVVRDGNGAVMTRKAQAEQAESLAI 487 Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 F DG + P + + ++E QG LF Sbjct: 488 EFADGTLD--------QGASPAPRKKPSAGRKEPPPEQGSLF 521 >gi|84686140|ref|ZP_01014035.1| Exonuclease VII, large subunit [Maritimibacter alkaliphilus HTCC2654] gi|84665667|gb|EAQ12142.1| Exonuclease VII, large subunit [Rhodobacterales bacterium HTCC2654] Length = 545 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 202/532 (37%), Positives = 293/532 (55%), Gaps = 14/532 (2%) Query: 3 PFSQ-----KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL 57 P S + + PE++VSELS +K ++E HV +RGE+ G SGH Y L Sbjct: 23 PMSDLIEDLEPGGNAPEFTVSELSGAVKRMIEGEFGHVRIRGEV-GRVSRPRSGHIYLDL 81 Query: 58 KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 KD+ + I +IWKG ++ PEEG+E + G++TTFPG SKYQI+I+ + P+G+G L+ Sbjct: 82 KDDRAVISGVIWKGVSARLATQPEEGMEVVATGRLTTFPGQSKYQIVIDDIAPAGAGALM 141 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF 177 LEKRK L EGLF+ + K PIP++P+II V+TSP+GAVIRDIL R+ RFP +V+I+ Sbjct: 142 AMLEKRKAALTAEGLFAQERKKPIPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIW 201 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 PV VQG+ C E+ AI N L G PRPD+II+ARGGGS+EDLW FN+E +VRA A Sbjct: 202 PVAVQGERCAPEVTRAIQGFNALTPGGALPRPDLIIVARGGGSVEDLWGFNEESVVRAAA 261 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S IP+ISA+GHETD TL DYAAD RAPTPT AAEMAVPV+ L + L +RL + + Sbjct: 262 ASDIPLISAVGHETDTTLIDYAADRRAPTPTAAAEMAVPVRRELMAYTAELGSRLTSALT 321 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + I + L L +ALP ++ L R RLDR L L + + N + Sbjct: 322 QGITRRAQRLTDLSRALPRAETLLETPRQRLDRAGDRLPAALIAKVRGEEVRLNRASGGL 381 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + L + + R+ + ++ + + + + E L R Sbjct: 382 RPSVLTNRVTVLRERVADRAGRLGYALARPVEAGKRELARLSPRLDPARIDEAR--VRKE 439 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L R+ + + +I+ + R+ + Y TLKRGY ++ + + +T + Sbjct: 440 REFEALCARLSRVGTGQIEGWQKRLDALERMRVTLGYTETLKRGYAVVRG-DGDVVTTRE 498 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 A + I F DG+ + VI +PT K + +++ QG LF Sbjct: 499 AAAHAGALEIEFHDGRLD--VIGGGGGSAKPTAKAK---KSKDEPPEQGTLF 545 >gi|118590626|ref|ZP_01548027.1| exodeoxyribonuclease VII large subunit [Stappia aggregata IAM 12614] gi|118436602|gb|EAV43242.1| exodeoxyribonuclease VII large subunit [Stappia aggregata IAM 12614] Length = 520 Score = 423 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 200/524 (38%), Positives = 301/524 (57%), Gaps = 5/524 (0%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + E+SVSE+S+ +K +E +V VRGE+ G SGH Y LKD+ S + Sbjct: 2 SETQSNVAEFSVSEISFSIKRTMEEAFGYVRVRGEL-GRISRPGSGHIYLDLKDDRSVLS 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +IW+G+ +K++ PE+G+E + GKITTFPG SKYQ++I+SL P+G+G L+ LE+RKK Sbjct: 61 GVIWRGSASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDSLEPAGAGALMALLEERKK 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 KL EGLF+++ K P+P +P++I VITSPTGAVIRDIL RIS RFPL V+++PV+VQG+ Sbjct: 121 KLAAEGLFAEERKRPLPPLPRVIGVITSPTGAVIRDILHRISDRFPLHVLVWPVRVQGET 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E+AN I N L+ G PRPD++I+ARGGGSIEDLW FN+E +VRA ++S IP+IS Sbjct: 181 SGAEVANGIRGFNALQPGGPIPRPDVLIVARGGGSIEDLWGFNEEAVVRAASDSQIPLIS 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETDWTL D AADLRAPTPTGAAE AVPVK L + + + RLN+ ++R + + Sbjct: 241 AVGHETDWTLIDLAADLRAPTPTGAAEFAVPVKAELMAMVDDRSRRLNSGLVRFVTTRRT 300 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ALP L+ R + D L LE L + H+ + R+ L Sbjct: 301 ELRAASAALPAPQDLLALPRQKFDTLASSLERALIVSTRTHRTHYQNFAGRLSPLLLSRL 360 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 K RQ +++ + ++ ++ + + L R + + L Sbjct: 361 TTKARQDLIQASERKQRALQVAVSQKRHSFEALAVRLTPSR--LAQQTTLGTERLSGLGE 418 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ ++ + ++L+S +YK+ L RGY ++D + + +A+ + Sbjct: 419 RLNRAYLARLSQEKARLDGLQKLLKSLSYKDVLARGYAVVRDDSGQPVRSAGAVASGAAL 478 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I DG +A+ ++ + + K + + QG LF Sbjct: 479 SIELADGTVDAVALSDSAGPK--PAKAKKQPAGKGPATNQGSLF 520 >gi|159184239|ref|NP_353300.2| exodeoxyribonuclease VII large subunit [Agrobacterium tumefaciens str. C58] gi|23814089|sp|Q8UIM4|EX7L_AGRT5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|159139567|gb|AAK86085.2| exodeoxyribonuclease VII large subunit [Agrobacterium tumefaciens str. C58] Length = 532 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 241/532 (45%), Positives = 335/532 (62%), Gaps = 3/532 (0%) Query: 1 MNP-FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ FS + E+SVSELS +K VE+ V VRGEISGYRG HSSGHAYFSLKD Sbjct: 1 MSDIFSHTALSNLAEFSVSELSGSIKRTVETAFEQVRVRGEISGYRGPHSSGHAYFSLKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +RIDA+IWKGT ++++F PEEG+E + GKITTFPGSSKYQI+IESL P+G+G L+ Sbjct: 61 DRARIDAVIWKGTFSRLKFRPEEGMEVIATGKITTFPGSSKYQIVIESLEPAGAGALMAL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE R+++L EGLF K P+PF+P++I V+TSPTGAVIRDIL RIS RFP+ V+++PV Sbjct: 121 LEDRRRRLAAEGLFDSARKRPLPFMPRVIGVVTSPTGAVIRDILHRISDRFPVHVVVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG+ +E+ANAI N LK G RPD++I+ARGGGS+EDLW FNDE++VRA A S Sbjct: 181 KVQGEGSGEEVANAIRGFNALKPGGDIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAES 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL DYAAD+RAPTPTGAAEMAVPV+ L++ L L ARL+ + R Sbjct: 241 EIPLISAVGHETDTTLIDYAADVRAPTPTGAAEMAVPVRAELEAQLSGLAARLSGSVSRQ 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + +L++ALP+ DQ L+ R R D L LE+ K R F + ++ Sbjct: 301 MDNRRQGVRALVRALPSLDQLLALPRRRFDEAASGLGRGLELTTLNKRRAFERSASGLRP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + L++ ++ +RQ I E+ E +V++ L + L L + ++ Sbjct: 361 ETLLNGLKHHRQRITERMHRAETLVERRLLQGKGRVDSFDSALRSLPARLLGQLERQKER 420 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + R + + H++ + ++ RILQS +YKN L RGY I+D N +T+ + Sbjct: 421 VVTAARRADTAVLHRMAQNRSGLAAHDRILQSLSYKNVLNRGYAVIRDEENRPLTRAAAI 480 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQ--PTKKCQLHNNKREKQGTQGELF 529 A+ + + F DG+ +AI + P + K + G QG LF Sbjct: 481 ASGAAVSMEFADGRVSAITTGEGTPAPETAAAPKKKPAKPASSDPGNQGNLF 532 >gi|182678223|ref|YP_001832369.1| exodeoxyribonuclease VII, large subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|259646285|sp|B2IJK8|EX7L_BEII9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|182634106|gb|ACB94880.1| exodeoxyribonuclease VII, large subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 549 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 206/542 (38%), Positives = 304/542 (56%), Gaps = 16/542 (2%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S + PE +VSELS LK +E V +RGEIS YRG HSSGHAYF LKD ++R Sbjct: 8 MLPPPSTNSPELTVSELSAALKRTLEDRFGIVRLRGEISNYRGPHSSGHAYFCLKDQNAR 67 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IWK T +++ PEEG+E + GKITT+ G S YQI++E++ P+G G L+ E R Sbjct: 68 IDAVIWKTTFMRLKVKPEEGLEVIATGKITTYAGKSSYQIVVEAIEPAGLGALMALFEAR 127 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 +++L EGLF ++ K +PF+P +I VITSPTGAVIRDIL RI+ RFP V+++PV+VQG Sbjct: 128 RRQLASEGLFDEERKRALPFLPAVIGVITSPTGAVIRDILHRITERFPRPVLLWPVRVQG 187 Query: 184 DECPKEIANAILQLNTLKEGRTCP--RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 + E++ AI N L P RPD++I+ARGGGS+EDLW FN+E +VRA A SSI Sbjct: 188 ETAAAEVSAAIEGFNALPVTGQGPLHRPDLLIVARGGGSLEDLWGFNEENVVRAAAASSI 247 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+I+AIGHETDWTL DYAADLRAPTPTGAAE AVPV+ L +SL +L+ R RL++ Sbjct: 248 PLIAAIGHETDWTLIDYAADLRAPTPTGAAEKAVPVRADLLTSLNDLQRRHAGAAYRLLE 307 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + + L +L +ALP +D L+ R RLDR L ++ + +R+ Sbjct: 308 RRRSDLRALARALPQADSLLATPRQRLDRTATRLATACLRAQDQRGLVLGRLAHRLSRQA 367 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ----TKNRIFYLH 417 ++ + Q + + + + + L Q + R+ Sbjct: 368 PHASLARLGQKLEAFGRGLGRACEIAQERRRQSLLHLGIRLTQNFTQGIRVERERVHGRR 427 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L R+ +S + ++ ++ +S +Y L RG+ ++D + + Sbjct: 428 QKLASLDNRLRQAMSLTLSQRQARLANLAQLTRSLSYHAVLARGFALVRDETGQPLRRAA 487 Query: 478 NLATKTRILINFFDG----QANAIVINKAPPKEQPTKKC------QLHNNKREKQGTQGE 527 ++ + + F DG A A+V P +PT+K ++++ K+ Q + Sbjct: 488 DIIENHVLTLEFSDGCRQAVAGALVATDPPVDPKPTRKPVQKSSSPKPSSRKPKKSQQED 547 Query: 528 LF 529 LF Sbjct: 548 LF 549 >gi|110632544|ref|YP_672752.1| exodeoxyribonuclease VII large subunit [Mesorhizobium sp. BNC1] gi|123354046|sp|Q11LY8|EX7L_MESSB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|110283528|gb|ABG61587.1| Exodeoxyribonuclease VII large subunit [Chelativorans sp. BNC1] Length = 519 Score = 421 bits (1083), Expect = e-115, Method: Composition-based stats. Identities = 225/530 (42%), Positives = 318/530 (60%), Gaps = 12/530 (2%) Query: 1 MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M + +S + EYSVSE+S+ LK +E HV VRGEISG+RG HSSGH YFSLKD Sbjct: 1 MEEAKKDDSLSNVAEYSVSEISHALKRTIEDTFGHVRVRGEISGFRGAHSSGHCYFSLKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +R++A+IWK T ++ F P+EG+E + G++TTFPGSSKYQI+IESL P+G+G L+ Sbjct: 61 ERARMEAVIWKTTFARLRFPPQEGLEVIATGRLTTFPGSSKYQIVIESLEPAGAGALMAL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE+RK+KL EGLF++ K P+PF+P +I V+TSPTGAVIRDI+ RI+ RFP+ V+++PV Sbjct: 121 LEERKRKLAAEGLFAESRKRPLPFMPHVIGVVTSPTGAVIRDIIHRITDRFPVHVVVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ E+A AI N L+ G T PRPDI+I+ARGGGS+EDLW FNDE +VRA A S Sbjct: 181 RVQGETTGAEVAAAISGFNALQPGGTIPRPDILIVARGGGSLEDLWGFNDEAVVRAAAAS 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHETDWTL D AAD RAPTPTGAAE+AVPVK L++++ L ARL I R Sbjct: 241 AIPLISAVGHETDWTLIDLAADRRAPTPTGAAEVAVPVKAELEANIARLSARLKGAISRC 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + SL +ALP+ DQ + R R D L L+ K H N + I Sbjct: 301 LDRRRQETRSLARALPSPDQLFALPRRRFDEAAGRLGRALQTSTQGKRLHLNAVRVSIA- 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L I + R+ + + + + + +R+ A + T RI L Sbjct: 360 -TLDRRIAQARRDANQCGERLPLVYQGLVRHRRARFDRDAARVSP--RVTLQRITTLGER 416 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 +K I R + +S +++ T R+ +S +YK+ L+RG+ ++D + + + ++ Sbjct: 417 LKIAIARKDRAVSLRVERARTVYEQAVRLAESLSYKSVLERGFALVRDGEDRPLKRASDV 476 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG AI K+ + + G QG LF Sbjct: 477 KPGETLRLQFADGNIGAISTGKSSNT-------NRKSAPAREPGKQGSLF 519 >gi|114763003|ref|ZP_01442433.1| exodeoxyribonuclease VII, large subunit [Pelagibaca bermudensis HTCC2601] gi|114544327|gb|EAU47335.1| exodeoxyribonuclease VII, large subunit [Roseovarius sp. HTCC2601] Length = 510 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 192/536 (35%), Positives = 282/536 (52%), Gaps = 33/536 (6%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ ++ + PE+SVSELS +K +E HV V+GE+ G SGH Y LKD+ Sbjct: 1 MDLL-DDDTGNTPEFSVSELSGAVKRTIEGEFGHVRVKGEV-GRVSRPRSGHIYLDLKDD 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S I ++WKG ++E PEEG+E + G++TTFPG SKYQI+IE + P+G G L+ L Sbjct: 59 RSVISGVVWKGVSARLETQPEEGMEVVATGRLTTFPGQSKYQIVIEDIRPAGLGALMAML 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRK +L EGLF K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+I+PV Sbjct: 119 EKRKAQLQAEGLFDPARKQPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVA 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+A AI N L G PRPD++I+ARGGGS+EDLW FN+E++ RA A S Sbjct: 179 VQGKSCAPEVARAIEGFNALSPGGAMPRPDLLIVARGGGSVEDLWGFNEEIVARAAAASD 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL DY +D RAPTP+ AAE+AVPV+ L AR+ + + I Sbjct: 239 IPLISAVGHETDTTLIDYVSDRRAPTPSAAAEIAVPVRMELLGWTGEAGARMTRAMGQRI 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L L +ALP ++ L R RLD L L L ++ + ++ Sbjct: 299 ELRSQRLRDLSRALPRAETLLDQPRQRLDLLGERLPRGLIRGTEQRRVVLSDAAGALRPS 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L I R+ + + + + + + Sbjct: 359 LLSRVIAHGRESLGRRTDRLS------------------------LRPIEREMRQGRERL 394 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R++ + ++++ ++ TR+L++ +YK TL+RGY ++ N +T+K Sbjct: 395 ATLTRRLDEAGTRRLETPRGTLDGLTRLLETLSYKGTLQRGYAVVRSGENEILTRKSAAE 454 Query: 481 TKTRILINFFDGQA-------NAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG+ + + + K QG LF Sbjct: 455 AAASLEIEFADGRLSLGAPGAASAPASAPTSAARSKPAAARQKRKPTDTPDQGSLF 510 >gi|319782228|ref|YP_004141704.1| exodeoxyribonuclease VII large subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168116|gb|ADV11654.1| exodeoxyribonuclease VII, large subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 543 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 216/549 (39%), Positives = 320/549 (58%), Gaps = 26/549 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + ++ + EY+VSE+S LK VE +V VRGEISGYRG HSSGHAYF+LKD+ Sbjct: 1 MSEVASESRTNAAEYTVSEISGALKRTVEDVFGNVRVRGEISGYRGPHSSGHAYFALKDD 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +R+DA++WKGT+++++F PEEG+E + GK+TT+PG S YQI+I++L P+G+G L+ L Sbjct: 61 RARLDAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGKSNYQIVIDNLEPAGAGALMALL 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF K +PF+P++I V+TSPTG+VIRDI+ RI RFPL V+++PV+ Sbjct: 121 EERKRRLQAEGLFDTGRKRLLPFMPRVIGVVTSPTGSVIRDIIHRIKDRFPLHVLVWPVR 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ E+ A+ N L RPD++I+ARGGGS+EDLW FNDE + RA+A S Sbjct: 181 VQGETSGAEVTAAVNGFNALAWDGAIQRPDLLIVARGGGSLEDLWGFNDEALARAVAASG 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETDWTL D AD+RAPTPTGAAE+AVPVK L+++L +L ARL ++R Sbjct: 241 IPVISAVGHETDWTLIDLVADVRAPTPTGAAEIAVPVKADLEATLASLGARLKAAVLRNF 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + K + +ALP+ DQ L+ R RLD L L + RK F ++ Sbjct: 301 ERKRQAARAAARALPSPDQLLALPRRRLDEATSRLGRGLLVSTERKRARF--FAVKLTPA 358 Query: 361 FLIHNIQKNR----QHILEKQ--------------QHIEQIVKQHLRYIFLEKKEKIAIL 402 L I + R +++L Q + + R K+++A+L Sbjct: 359 MLSQRIAEARRTNERNLLRAQGALRAMARARRAELNRAADQLPKCARASLQRHKQQLAML 418 Query: 403 HML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 E T R + L R + +++ V R++ S ++K L R Sbjct: 419 QGRITIEPTARRQRVQRDLLTALTRRGTQAVVLRLERLRGRVVQADRLMASLSHKAVLAR 478 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520 G+ ++D + + Q ++A+ + + F DG A+A+ I+ K K + Sbjct: 479 GFALVRDADGAVVKQAADVASGMALSLEFADGTADAVAISGT----AKPKAVAKPAAKAK 534 Query: 521 KQGTQGELF 529 + G QG LF Sbjct: 535 EPGNQGSLF 543 >gi|217976587|ref|YP_002360734.1| exodeoxyribonuclease VII, large subunit [Methylocella silvestris BL2] gi|217501963|gb|ACK49372.1| exodeoxyribonuclease VII, large subunit [Methylocella silvestris BL2] Length = 521 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 200/530 (37%), Positives = 283/530 (53%), Gaps = 13/530 (2%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + PE +VSELS LK +E V +RGEIS YRG HSSGHAYF LKD +R Sbjct: 1 MPEPVASNAPELTVSELSNALKRTIEDRFGFVRLRGEISNYRGPHSSGHAYFCLKDAGAR 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IWKG ++ PEEG+E + GKITTFPG S YQII+E++ P+G G L+ E+R Sbjct: 61 IDAVIWKGVFGRLRVKPEEGLEVIATGKITTFPGKSSYQIIVEAIEPAGVGALMALFEER 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 ++KL EGLF + K +PF+P + VITSPTGAVIRDIL RI RFP V+++PV+VQG Sbjct: 121 RRKLAAEGLFDEARKKALPFLPLRVGVITSPTGAVIRDILHRIKDRFPRHVLVWPVRVQG 180 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + E+A AI L E RP +II+ARGGGS+EDLW FN+E++VRA+A S+IP+ Sbjct: 181 ETSAAEVAAAIAGFGALPEDGPLARPHVIIVARGGGSLEDLWSFNEEIVVRAVAASAIPL 240 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISAIGHETDWTL D+AADLRAPTPTGAAE AVPV+ L + + +L R + RL+ + Sbjct: 241 ISAIGHETDWTLIDHAADLRAPTPTGAAEKAVPVRLQLIADVADLSRRHAGAMARLLDRR 300 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + +L +ALP ++ L+ R +LD R + + R+ Sbjct: 301 RSEARALSRALPLPEEILALPRQKLDHAGRRFANAILRAHDHYSLALGRAAQRLARQTPR 360 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYLHTH 419 + + + + QQ +++ L R + R Sbjct: 361 ARMARAGEKLAGLQQRMQRSAVIGRERRAAALNSLGERLINARLSRARAEQERTAAARHR 420 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + L R+ + KI + + ++ +S YKN L RG+ ++D N + + Sbjct: 421 LDVLGPRLLRAVHEKIAARRAELRRLDQLRESLGYKNVLARGFALVRDAEGNPLRLAAAI 480 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG P ++ +QG LF Sbjct: 481 TDGALLDLQFADG---------HKPAVAGAAPGAPRKTSASRKPSQGSLF 521 >gi|115526606|ref|YP_783517.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris BisA53] gi|115520553|gb|ABJ08537.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris BisA53] Length = 546 Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 207/546 (37%), Positives = 299/546 (54%), Gaps = 17/546 (3%) Query: 1 MN-PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ P + + PE++V+ELS LK VE HV VRGEI+G+RG HSSGH YFSLKD Sbjct: 1 MSKPSVSEPLGNSPEFTVTELSSALKRTVEDAYGHVRVRGEITGFRGAHSSGHCYFSLKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + ++I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE++ P+G G L+ Sbjct: 61 DGAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGVGALMAL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 +E+RK+KL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV Sbjct: 121 MEERKRKLGAEGLFDEARKQLLPYLPEVIGVVTSPTGAVIRDILHRLQDRFPRRVLVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +++A AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A S Sbjct: 181 RVQGEGSAEQVAAAIHGFNALSEGGAIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAES 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + R+ R Sbjct: 241 MIPLISAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRAELFVEVSARNRRMMLCWQRG 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L + +ALP+ L+ RLD L L +R F + Sbjct: 301 QERRRTELRAATRALPSGGALLAIPTQRLDGAAAALPRALRANTHAHHRRFAQASAGLTL 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH----MLREQTKNRIFY 415 L + Q + ++ + LR A L + + RI Sbjct: 361 RVLRAQVAHAAQRLDVNGARLKHCARAALRQRRDRFDALAARLKTSKLANAQAQRARIAR 420 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 ++L R LS I+ V+ ++L + +Y+ L RG+ ++D + Sbjct: 421 EQERTQRLTERSRRALSILIERHRARVTHAGQLLGALSYRGVLARGFALVRDAQGAALHA 480 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN------------NKREKQG 523 ++A + + F DG+ A P + TK + K Sbjct: 481 AASVAAGAHLTLEFADGRIGATADADGRPAQASTKATMSARSDAKPAKPAAAVKRVAKPV 540 Query: 524 TQGELF 529 QG LF Sbjct: 541 GQGSLF 546 >gi|288958827|ref|YP_003449168.1| exodeoxyribonuclease VII large subunit [Azospirillum sp. B510] gi|288911135|dbj|BAI72624.1| exodeoxyribonuclease VII large subunit [Azospirillum sp. B510] Length = 578 Score = 418 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 187/529 (35%), Positives = 289/529 (54%), Gaps = 9/529 (1%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + + PE++V +L+ LK +E V VRGEIS + HSSGH Y LKD+ + I Sbjct: 55 EPRPGSNLPEFTVGDLARRLKRSIEEEFGFVRVRGEISQPK-KHSSGHCYMRLKDDTAVI 113 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +A+ W+GT+ K+ PEEG+E +V G++TT+PG S+YQ+I+ES+ +G G LL LE+RK Sbjct: 114 EAVCWRGTMAKLAIRPEEGLEVIVTGRMTTYPGRSQYQLIVESMELAGEGALLKMLEERK 173 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 ++L EGLF K PIPF+P +I V+TSPTGAVIRDIL R++ RFP V+++PV VQG+ Sbjct: 174 RRLTAEGLFDPARKKPIPFLPDVIGVVTSPTGAVIRDILHRLNDRFPRHVLLWPVAVQGE 233 Query: 185 ECPKEIANAILQLNTLKEGRTC----PRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 E+ AI N ++ G PRPD+II+ARGGGS+EDL FN+E +VRA A S+ Sbjct: 234 RAAAEVTAAIEGFNRIQPGGPQGSRVPRPDLIIVARGGGSLEDLMAFNEESVVRAAAASA 293 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+DLRAPTPT AAEMAVPV+ L + +++ E RL R + Sbjct: 294 IPLISAVGHETDTTLIDFASDLRAPTPTAAAEMAVPVRGELLAQILDDERRLIACASRAV 353 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + N + L + L + L RLD L ++ R+ + +++ Sbjct: 354 ADRRNRVEGLARGLGDPRALLEGHAQRLDDRAERLNLAASALLERRRTRVGELAAKLR-- 411 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + Q + + + ++ ++ + + L + + + Sbjct: 412 HPREKLAQAGQRLASESRALDSALRHAVTTAGGRFERVAGRLSP--TPARAMLAEGERRV 469 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R++ + + +++ ++L+S++YK L RG+ I+D + +T Sbjct: 470 ADLAPRLDRSHAKGVADKAAALASLGQLLESYSYKGVLARGFALIEDRDGRPVTGADQAT 529 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F D A I+ PK + + + K QG LF Sbjct: 530 PGLAVTIVFADDAKVAATIDGGAPKPESKPEKKAEPRKPRPIPVQGSLF 578 >gi|296446110|ref|ZP_06888058.1| exodeoxyribonuclease VII, large subunit [Methylosinus trichosporium OB3b] gi|296256304|gb|EFH03383.1| exodeoxyribonuclease VII, large subunit [Methylosinus trichosporium OB3b] Length = 526 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 198/527 (37%), Positives = 282/527 (53%), Gaps = 20/527 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + PE SVSEL+ LK VE HV VRGEI+ YRG HSSGH YFSLKD ++ Sbjct: 20 PIGAPPQSNVPELSVSELANALKRTVEDRFGHVRVRGEITNYRGPHSSGHVYFSLKDQNA 79 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 R+DA+IWK T ++ P+EG+E + GKITTFPG S YQI+I++L P+G+G L+ L++ Sbjct: 80 RLDAVIWKTTFFRLRVKPQEGLEVVATGKITTFPGKSSYQIVIDTLEPAGAGALMALLDE 139 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182 R+K+L EGLF + K P+PF+P ++ V+TSPTGAVIRDIL R+ RFP RV+++PV+VQ Sbjct: 140 RRKRLAAEGLFDAERKRPLPFLPAVVGVVTSPTGAVIRDILHRLLDRFPRRVLVWPVRVQ 199 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ C E+ AI N L G PRPD++I+ARGGGS+EDLW FN+E++VRA A S+IP Sbjct: 200 GESCAAEVTAAIEGFNALPPGGPIPRPDVLIVARGGGSLEDLWGFNEEIVVRAAAASAIP 259 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHETD TL D+ +DLRAPTPTGAAE VPV+ L L RL+ RL+ Sbjct: 260 LVSAIGHETDTTLIDFVSDLRAPTPTGAAEKCVPVRAELIEQTAVLARRLSGAERRLLDA 319 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L SL + LP Q L R DR L L + + +H+ + + Sbjct: 320 HRRHLVSLQRVLPAGPQLLMHPFQRSDRAGERLRAALRRALDARRLRLSHLTHVLARHSP 379 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + + + + + Q + + + + Sbjct: 380 QAELARASERLKGLHARLRQGLSARMALA------------------RREADGAQRRVDH 421 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 R+ I + ++ + Y++ L RG+ ++D + R++ Sbjct: 422 AEQRLRSAYFRIIADRQARLDRLDQLRRMLGYESVLARGFALVRDEQGTVLRLARDVTPG 481 Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F D A APP+ + + +K G QG LF Sbjct: 482 MAMAIQFADSAVRARAEGDAPPEPPAPPRPKRGKDKT--GGGQGTLF 526 >gi|298293951|ref|YP_003695890.1| exodeoxyribonuclease VII large subunit [Starkeya novella DSM 506] gi|296930462|gb|ADH91271.1| exodeoxyribonuclease VII, large subunit [Starkeya novella DSM 506] Length = 514 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 206/528 (39%), Positives = 297/528 (56%), Gaps = 18/528 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + ++ + P+++VSELS LK VE HV VRGEISGYRG HSSGHAYFSLKD + Sbjct: 3 DTTTESPISNAPDWTVSELSGALKRTVEDAFGHVRVRGEISGYRGPHSSGHAYFSLKDQN 62 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +R+DA++WKG +++ PEEG+E + IG+ITTFPG S YQI+I+ L +G+G ++ LE Sbjct: 63 ARLDAVVWKGVFGRLKVRPEEGLEVVAIGRITTFPGKSSYQIVIDQLEFAGAGAIMAMLE 122 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RK++L EGLF+ + K PF+P +I V+TSPTGAVIRDIL R+S RFP V+++PV+V Sbjct: 123 ERKRRLAAEGLFAGERKRRPPFLPVVIGVVTSPTGAVIRDILHRLSDRFPRHVLVWPVRV 182 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+ AI N L G PRPD++I+ARGGGS+EDL F++E +VRA A S+I Sbjct: 183 QGDTCGAEVTAAIRGFNALTPGGPIPRPDVLIVARGGGSLEDLLGFSEESVVRAAAESAI 242 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETD TL D+AAD+RAPTPT AAEMAVPV+ L + + L ARL R + Sbjct: 243 PLISAVGHETDVTLIDFAADVRAPTPTAAAEMAVPVRADLIAEVAGLHARLRACFARGLD 302 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L SL + LP++D L+ R RLD + L L+ R+ Sbjct: 303 RRATDLRSLSRLLPSADALLALPRQRLDIAGQRLPRALKANAAAHRLALTRAEGRLAPQR 362 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L +++ R+ + L + RI + Sbjct: 363 LAVLVERRRERFELFAGRLSSA------------------LRANANAHRERIDRARERVN 404 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + R+ L + + +++Q+ +YK L RGY ++D N + +A+ Sbjct: 405 GVHARLAPCLRRGHEERARKLRSLEQLMQALSYKGVLARGYALVRDANGEPLHAAAEVAS 464 Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG+ +A+ + P P +K + +Q LF Sbjct: 465 GQALEIEFRDGRVSAVATGEGTPPRPPARKPAKPRGALPDEDSQPTLF 512 >gi|300024096|ref|YP_003756707.1| exodeoxyribonuclease VII large subunit [Hyphomicrobium denitrificans ATCC 51888] gi|299525917|gb|ADJ24386.1| exodeoxyribonuclease VII, large subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 488 Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 190/526 (36%), Positives = 282/526 (53%), Gaps = 49/526 (9%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + PE+SVSELS +K +E +V +RGEISGYRG H+SGH YF+LKD+ ++I+ Sbjct: 10 ARPGANAPEFSVSELSGAIKRALEDGFGYVRLRGEISGYRGPHASGHCYFALKDDRAKIE 69 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 A+IWKG+ ++ F PEEG+E + GKITTFPGSSKYQI+IE L P+G+G L+ LE+RK+ Sbjct: 70 AVIWKGSFGRLRFKPEEGMEVVAQGKITTFPGSSKYQIVIEQLEPAGAGALMALLEERKR 129 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 K EGLF + K P PF+PK++ ++TSPTGAVIRD+L + RFP V+++PV+VQG+ Sbjct: 130 KFAAEGLFEEARKKPRPFLPKVVGIVTSPTGAVIRDMLHGFNERFPTCVLLWPVRVQGEG 189 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E+A AI N L+ G PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+IS Sbjct: 190 SAAEVAAAIRGFNALEIGGKIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESRIPLIS 249 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETDWTL D AD RAPTPT AAE AVP L +L + R I R++ Sbjct: 250 AVGHETDWTLIDLVADARAPTPTKAAEWAVPKYSELIEALDKFQLRKRTAIRRVLADTRT 309 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + + LP ++ R R D + R L L + R+ + ++ Sbjct: 310 HLKASSRGLPKLQDLIALPRQRFDAVDRRLSRALLANTRAHGTRLARVSGRLSAQPIVQK 369 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + R+ + ++ Q + + Sbjct: 370 HSRCRERLDVLERRAGQALINRV------------------------------------- 392 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + + + +L+S Y++ L RG+ ++D + Q R+++ + Sbjct: 393 ----AVRRR------DLDGKSALLKSLGYQSVLSRGFALVRDETGVTVRQARSVSPGAAL 442 Query: 486 LINFFDGQANAIVINKAP--PKEQPTKKCQLHNNKREKQGTQGELF 529 + F DG+ + + + K +G QG LF Sbjct: 443 SVQFSDGRIGVVADGDPATGTGAESAAGTKPPRQKTRTRGGQGSLF 488 >gi|307941763|ref|ZP_07657118.1| exodeoxyribonuclease VII, large subunit [Roseibium sp. TrichSKD4] gi|307775371|gb|EFO34577.1| exodeoxyribonuclease VII, large subunit [Roseibium sp. TrichSKD4] Length = 524 Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 202/522 (38%), Positives = 298/522 (57%), Gaps = 5/522 (0%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + E+SVSE+S+ +K +E +V VRGE+ G SGH Y LKD + + +IW Sbjct: 6 SNVAEFSVSEISFSIKRAMEDTFGYVRVRGEL-GRISRPGSGHIYLDLKDERAVLSGVIW 64 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G +K++ PE+G+E + GKITTFPG SKYQ++I+SL P+G+G L+ LE+RKKKL Sbjct: 65 RGVASKLKIQPEQGLEVIATGKITTFPGQSKYQMVIDSLEPAGAGALMALLEERKKKLAA 124 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189 EGLFS++ K +P +P++I V+TSPTGAVIRDIL RIS RFPL V+++PV+VQG+ E Sbjct: 125 EGLFSEERKQRLPHLPRVIGVVTSPTGAVIRDILHRISDRFPLHVLVWPVRVQGETSGAE 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +AN I N+L+ G PRPD+I++ARGGGSIEDLW FN+E +VRA A S IP+ISA+GH Sbjct: 185 VANGIRGFNSLQAGGPIPRPDLIVVARGGGSIEDLWGFNEEAVVRAAAASEIPLISAVGH 244 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETDWTL D AADLRAPTPTGAAE+AVPVK L + + +L RL + + R I + L + Sbjct: 245 ETDWTLIDLAADLRAPTPTGAAEIAVPVKAELLALVDDLSRRLYSGLNRSIANRRTELRA 304 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 ALP L+ R R D LE L + F+ + R+ L + Sbjct: 305 AGAALPAPRDLLALPRQRFDTAAGSLERALIVNTRSHRSGFDGVSARLSPLLLTRGLSHA 364 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + + ++ ++ + L R + ++ + +K L R++ Sbjct: 365 HDRLTALVDRQSRALQVTVQSKRQTYSAVASRLTPDRLRQQSALGL--ERLKTLSERMDR 422 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +++ + ++L S +YK L RGY ++D + + ++ +++I Sbjct: 423 AYGNRLAQDKARLDGLDKLLNSLSYKEVLSRGYAVVRDKSGTPVRSATDVPAGEKLVIEL 482 Query: 490 FDGQANAIVINK--APPKEQPTKKCQLHNNKREKQGTQGELF 529 DG +A+ ++ A E+ K K K TQG LF Sbjct: 483 SDGLIDAMAVSANSASKTEKKAPKKPAAKPKNNKPETQGNLF 524 >gi|163737651|ref|ZP_02145068.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis BS107] gi|161389177|gb|EDQ13529.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis BS107] Length = 521 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 189/541 (34%), Positives = 283/541 (52%), Gaps = 39/541 (7%) Query: 2 NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 +P + + PE++VSE+S +K +E + V+GE+ G SGH Y+ +KD+ Sbjct: 7 DPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIKDD 65 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S + WKG + + +PEEG+E +V G++T F G SKY + ++ + +G G L+ L Sbjct: 66 RSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMALL 125 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRKK+L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+++PV Sbjct: 126 EKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+A AI N L G PRPD+II+ARGGGSIEDLW FN+E + RA+ANS Sbjct: 186 VQGANCAPEVARAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEETVARAVANSQ 245 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L N ARL + + Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWTENQGARLVRSAGQAV 305 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + LN L +ALP D L R RLDR+ L L + R+ + ++ Sbjct: 306 QQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVERRRLRLSEAAAALRPS 365 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L + + + + + + H I Sbjct: 366 TLRQLVGARQDRLRNLSSRLT------------------------LRPIQQDLARQHDRI 401 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +L R+E + + ++ + T R L+ +YK TL+RGY ++ + IT+ A Sbjct: 402 GQLTQRLEAVQTQRLDRHRQRLEATGRQLEILSYKATLERGYAVVRSDDG-VITRATEAA 460 Query: 481 TKTRILINFFDGQANAIV------INKAPPKEQPTKKCQLHNNK------REKQGTQGEL 528 T+ R+ I F D + + PP ++ + + + QG L Sbjct: 461 TQPRLRIEFADAEIDVTPAEAGGGDGGTPPAKRSSAPKSEASKPGKRPSGKAPPDDQGSL 520 Query: 529 F 529 F Sbjct: 521 F 521 >gi|83942803|ref|ZP_00955264.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp. EE-36] gi|83846896|gb|EAP84772.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp. EE-36] Length = 511 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 195/530 (36%), Positives = 289/530 (54%), Gaps = 20/530 (3%) Query: 1 MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + + PE++V+ELS +K ++E HV +RGE+ G SGH Y LKD Sbjct: 1 MDLIDDPREGQNSPEFTVTELSGAIKRVIEGEFGHVRIRGEV-GRVSRPRSGHIYLDLKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + S I +IWKG ++E PEEG+E + G+ITTF G SKYQI+IE + P+G G L+ Sbjct: 60 DSSVISGVIWKGVSARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LEKRK L EGLF+ + K P+P++P++I V+TSP+GAVIRDIL R+ RFP +V+I+PV Sbjct: 120 LEKRKAALAAEGLFAPERKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +C E+A AI N L G PRPD++I+ARGGGS+EDLW FN+E++ RA A S Sbjct: 180 AVQGAKCAPEVARAIAGFNALTPGGALPRPDLLIVARGGGSVEDLWGFNEEIVARAAAAS 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+ L + L EAR+ + + Sbjct: 240 DIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELVALLDGQEARMTQALSQG 299 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L + +ALP D L R RLD L L + ++ H + I ++ Sbjct: 300 LARRDQRLRDMARALPRPDSLLDGPRQRLDMRGARLGPALTAGVQKRKVHLSDISGALRP 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L ++Q ++ + +++ + I + + Sbjct: 360 ATLRRSLQTEQRRLAALADRFRPEALGR----EQKRRLEGLIARFRPDALEQDRKRKEEA 415 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + L R+ + + H ++ R+ + +YK+TL RGY ++ + +T K+ Sbjct: 416 FQSLARRLSDAGQRQTQGWHKQIAGLDRLHEMLSYKSTLARGYAVVRG-DGGVVTTKQAA 474 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + I F DG+ + A PK+ P K QG LF Sbjct: 475 QDASALEIEFIDGKMK--IGGGAAPKKTPKKAP-----------EQGSLF 511 >gi|221638251|ref|YP_002524513.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides KD131] gi|254783706|sp|B9KM14|EX7L_RHOSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|221159032|gb|ACM00012.1| Exodeoxyribonuclease 7 large subunit [Rhodobacter sphaeroides KD131] Length = 519 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 193/534 (36%), Positives = 283/534 (52%), Gaps = 22/534 (4%) Query: 1 MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ S + PE++VSELS +K ++E V VRGEI G +SGH YF LK Sbjct: 1 MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + AI WKG ++ PEEG+E + G++TTFPG SKYQII+E + P+G+G L+ Sbjct: 60 DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKR+ L EGLF K P+P++P++I V+TSP+GAVIRDIL R+ RFP V+I+P Sbjct: 120 MLEKRRAALAAEGLFDAARKRPLPYLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG++C E+A AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L ARL+ Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAE 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L L +ALP + ++ R D L L + + + ++ Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + + ++ + +E + + + A L + Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFEALSARLAPAFARLIAETERATR 419 Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + L R++ ++ + R+ Q+ Y+ TLKRGY ++ + +T Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVVT 478 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 K T + I F DG+ + +E+ QG L Sbjct: 479 TKAEAGTAAVLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518 >gi|170747101|ref|YP_001753361.1| exodeoxyribonuclease VII, large subunit [Methylobacterium radiotolerans JCM 2831] gi|170653623|gb|ACB22678.1| exodeoxyribonuclease VII, large subunit [Methylobacterium radiotolerans JCM 2831] Length = 566 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 209/547 (38%), Positives = 295/547 (53%), Gaps = 20/547 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + PE+SV EL+ LK +E HV +RGEISGYRG H SGHAYFSLKD + Sbjct: 18 PPTSVLNANQPEWSVGELAGALKRTLEDAFGHVRLRGEISGYRGQHGSGHAYFSLKDGQA 77 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 RIDA++WKG ++ P+EG+E + G+ITTF G S YQI+IESL P+G G + LE+ Sbjct: 78 RIDAVVWKGVFGRLRQRPQEGLEVVATGRITTFAGKSSYQIVIESLEPAGLGAWMALLEE 137 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182 RKK+L EGLF+ HK PIP++P+++ V+TSPTGAVIRDIL R+ RFP V+++PV+VQ Sbjct: 138 RKKQLAAEGLFAPDHKRPIPYLPRVVGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVRVQ 197 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 GD +E+A AI N L G PRPD++I+ARGGGSIEDLW FN+E +VRA S+IP Sbjct: 198 GDGAAEEVAAAIRGFNALPAGGPIPRPDVLIVARGGGSIEDLWAFNEECVVRAAFASAIP 257 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +ISA+GHETD TL DY +D RAPTPTGAAEMAVPV+ L +++ +L AR + R I Sbjct: 258 LISAVGHETDTTLIDYVSDRRAPTPTGAAEMAVPVRADLIATVADLAARGRGAVGRRIDR 317 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L +L +ALP++D L+ R RLD L L R +++R+ Sbjct: 318 DRSDLRALGRALPSADALLAAKRQRLDLAEARLAPALAAGASRHRARLQLLLDRMARRSP 377 Query: 363 IHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + R + + V++ + + + E+ + Sbjct: 378 DVALANARARLARIDHRPLHALRNDVQRKGEALIQLGRRLVVAREASLERARALQARRTD 437 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L R+ + I+ + +L S +Y+ L RGY ++D + + Sbjct: 438 RLLALSERLAQAGARGIERRRDRLDGLAGLLGSLSYRAVLDRGYVLVRDAAGLPVRRAAA 497 Query: 479 LATKTRILINFFDGQANAIVINKAPP-----KEQPTK-----------KCQLHNNKREKQ 522 A R+ + F DG A+ P +P K R Sbjct: 498 AAAAQRLSLQFADGTVTAVPDGTDDPSLPVDPSRPAKPGRRGGAAAPAAPGKRTGTRPAA 557 Query: 523 GTQGELF 529 QG LF Sbjct: 558 TRQGSLF 564 >gi|332560275|ref|ZP_08414597.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides WS8N] gi|332277987|gb|EGJ23302.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides WS8N] Length = 519 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 193/534 (36%), Positives = 282/534 (52%), Gaps = 22/534 (4%) Query: 1 MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ S + PE++VSELS +K ++E V VRGEI G +SGH YF LK Sbjct: 1 MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + AI WKG ++ PEEG+E + G++TTFPG SKYQII+E + P+G+G L+ Sbjct: 60 DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKR+ L EGLF K+P+PF+P++I V+TSP+GAVIRDIL R+ RFP V+I+P Sbjct: 120 MLEKRRAALAAEGLFDAARKHPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG++C E+A AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L ARL+ Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAE 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L L +ALP + ++ R D L L + + + ++ Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + + ++ + +E + + A L + Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFDALSARLAPAFARLIAETERATR 419 Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + L R++ ++ + R+ Q+ Y+ TLKRGY ++ + +T Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVLT 478 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 K + I F DG+ + +E+ QG L Sbjct: 479 TKAEAGAAAMLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518 >gi|77462391|ref|YP_351895.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides 2.4.1] gi|123757775|sp|Q3J5E0|EX7L_RHOS4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|77386809|gb|ABA77994.1| Exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides 2.4.1] Length = 519 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 193/534 (36%), Positives = 282/534 (52%), Gaps = 22/534 (4%) Query: 1 MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ S + PE++VSELS +K ++E V VRGEI G +SGH YF LK Sbjct: 1 MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + AI WKG ++ PEEG+E + G++TTFPG SKYQII+E + P+G+G L+ Sbjct: 60 DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKR+ L EGLF K+P+PF+P++I V+TSP+GAVIRDIL R+ RFP V+I+P Sbjct: 120 MLEKRRAALAAEGLFDAARKHPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG++C E+A AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L ARL+ Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQVARLSRCAAE 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L L +ALP + ++ R D L L + + + ++ Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + + ++ + +E + + A L + Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFDALSARLAPAFARLIAETERATR 419 Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + L R++ ++ + R+ Q+ Y+ TLKRGY ++ + +T Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVLT 478 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 K + I F DG+ + +E+ QG L Sbjct: 479 TKAEAGAAAMLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518 >gi|304393145|ref|ZP_07375073.1| exodeoxyribonuclease VII, large subunit [Ahrensia sp. R2A130] gi|303294152|gb|EFL88524.1| exodeoxyribonuclease VII, large subunit [Ahrensia sp. R2A130] Length = 558 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 209/553 (37%), Positives = 303/553 (54%), Gaps = 28/553 (5%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + + E SVSELS LK VE HV VRGEISGYRG HSSGH+YF+LKD+ +RI Sbjct: 6 NASKDTNALEVSVSELSGKLKRTVEDQFGHVRVRGEISGYRGPHSSGHSYFALKDDRARI 65 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 DAIIWKG K+ PEEG+E + GK+TT+PG S YQI+I+ + P+G+G L+ LE+RK Sbjct: 66 DAIIWKGQNAKLAHKPEEGLEVIASGKLTTYPGRSSYQIVIDHIEPAGAGALMALLEQRK 125 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 K L EGLF+D+ K IPF+P++I V+TSPTGAVIRDIL R+ R+P+ VI++PV+VQG+ Sbjct: 126 KALASEGLFADERKQLIPFMPRVIGVVTSPTGAVIRDILHRLMDRYPVHVIVWPVRVQGE 185 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +E+AN + QLN +G P+PD+II+ARGGGS+EDLW FNDE +VR++A S IP+I Sbjct: 186 TSGREVANGVYQLNRFGDGTDWPKPDLIIVARGGGSLEDLWGFNDEALVRSVAASDIPVI 245 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETDWTL DYAADLR PTPT AAE AVP+K L++ L NL ARL + R+ + + Sbjct: 246 SAVGHETDWTLVDYAADLRMPTPTAAAEKAVPIKADLEAHLANLSARLRAAVSRVAETRR 305 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 +L + + LP+ D L+ R D L NL + R + ++ L Sbjct: 306 TSLRATSRGLPSLDNLLALPRRAFDEAAAGLGRNLVQRVERASFSYERAAGGLRPLLLEK 365 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL---------------------H 403 + + + + + ++ ++ ++ R ++ L Sbjct: 366 RLAASGELLARQIENHQRALRNATRSKRQRFDDRAGRLSPDVLNRPISMAQRNLSQAANK 425 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + E R+ K R++ + + + R+ +S +YK+ ++RGY Sbjct: 426 LRPEPLVQRVSAGRDASNKAFARVDRLTTASLAQAKERFERAERMRESLSYKSVIQRGYA 485 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQL-------HN 516 ++D + N+A I + DG A V + + Sbjct: 486 VLRDDAGALVDNASNVAVGDNIHVEMRDGSFGANVTDTNAAPPAKVAQSATVSKPKTPKK 545 Query: 517 NKREKQGTQGELF 529 + QG LF Sbjct: 546 AAKPPATDQGNLF 558 >gi|85706860|ref|ZP_01037951.1| Exonuclease VII, large subunit [Roseovarius sp. 217] gi|85668653|gb|EAQ23523.1| Exonuclease VII, large subunit [Roseovarius sp. 217] Length = 497 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 196/531 (36%), Positives = 284/531 (53%), Gaps = 36/531 (6%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PE+SVS+LS +K ++E SHV VRGE+ G SGH Y LK Sbjct: 1 MSDLIDDPDEGGNAPEFSVSDLSGAIKRMIEGEFSHVRVRGEL-GRISRPRSGHIYLDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + IIWKG ++ PEEG+E + G++TTFPG S+YQIIIE + P+G G L+ Sbjct: 60 DDSAVLAGIIWKGVATRLAVQPEEGMEVVATGRLTTFPGQSRYQIIIEDMKPAGMGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRK L EGLF+ + K +P++P II V+TSP+GAVIRDIL R+ RFP +V+I+P Sbjct: 120 MLEKRKAALAAEGLFAPERKQALPYLPDIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQGD+C E+A AI N + G PRPD+II+ARGGGS+EDLW FN+E++VRA A Sbjct: 180 VAVQGDKCAPEVARAIRGFNAMTPGGALPRPDLIIVARGGGSVEDLWGFNEEIVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVPV+ L + + ARL++ + + Sbjct: 240 SVIPLISAVGHETDTTLIDFASDKRAPTPTAAAELAVPVRMDLLAWVEGQGARLSHALSQ 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L +ALP +D L R RLD L L L + + H + ++ Sbjct: 300 GVSLRGQRLRDLARALPRADVLLDGPRQRLDALGERLPAALIRSVQVRRVHLSETAGALR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L ++ +R+ + + I Sbjct: 360 PALLRRAVEGDRRRLQATAARL------------------------NVHALNRDITQKRR 395 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + ++ R + +++ +S R+ ++ YK TLKRGY ++ + +T ++ Sbjct: 396 ELDRMSARFSEVAGRQVRGWQDRLSALERLRETLGYKATLKRGYAVVRG-DGAVVTTRKA 454 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 A + I F DG + V P P + QG LF Sbjct: 455 AAGAAVLEIEFADGMLD--VSGTGPAVPIP------KVKPKTPPEGQGSLF 497 >gi|163740774|ref|ZP_02148167.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis 2.10] gi|161385765|gb|EDQ10141.1| exodeoxyribonuclease VII, large subunit [Phaeobacter gallaeciensis 2.10] Length = 521 Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats. Identities = 189/541 (34%), Positives = 283/541 (52%), Gaps = 39/541 (7%) Query: 2 NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 +P + + PE++VSE+S +K +E + V+GE+ G SGH Y+ +KD+ Sbjct: 7 DPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIKDD 65 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S + WKG + + +PEEG+E +V G++T F G SKY + ++ + +G G L+ L Sbjct: 66 RSVLACTTWKGQIASLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMALL 125 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRKK+L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+++PV Sbjct: 126 EKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+A AI N L G PRPD+II+ARGGGSIEDLW FN+E + RA+ANS Sbjct: 186 VQGANCAPEVARAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEETVARAVANSQ 245 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L N ARL + + Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWTENQGARLVRSAGQAV 305 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + LN L +ALP D L R RLDR+ L L + R+ + ++ Sbjct: 306 QQRRQRLNDLARALPKPDTLLETPRQRLDRVSERLPDALIRGVERRRLRLSEAAAALRPS 365 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L + + + + + + H I Sbjct: 366 TLRQLVGARQDRLRNLSSRLT------------------------LRPIQQDLARQHDRI 401 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +L R+E + + ++ + T R L+ +YK TL+RGY ++ + IT+ A Sbjct: 402 GQLTQRLEAVQTQRLDRHRQRLEATGRQLEILSYKATLERGYAVVRSDDG-VITRAAEAA 460 Query: 481 TKTRILINFFDGQANAIV------INKAPPKEQPTKKCQLHNNK------REKQGTQGEL 528 T+ R+ I F D + + PP + + + + + QG L Sbjct: 461 TQPRLRIEFADAEIDVTPAEAGGGDGVTPPAKSSSAPKSEASKPGKRPSGKAQPDDQGSL 520 Query: 529 F 529 F Sbjct: 521 F 521 >gi|163733311|ref|ZP_02140754.1| exodeoxyribonuclease VII, large subunit, putative [Roseobacter litoralis Och 149] gi|161393099|gb|EDQ17425.1| exodeoxyribonuclease VII, large subunit, putative [Roseobacter litoralis Och 149] Length = 513 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 180/530 (33%), Positives = 284/530 (53%), Gaps = 18/530 (3%) Query: 1 MNPFSQK-NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + PE++VSE+S +K +E V VRGE+S SGH Y+ +KD Sbjct: 1 MDLLDDPTPGQNTPEFTVSEISGAVKRTLEGEFGRVRVRGEVS-RVIKARSGHMYYDIKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +++ WKG + ++ +PEEG+E +V G+IT + SKY + ++ + +G G L+ Sbjct: 60 DRNQLSCTTWKGQVARLSVIPEEGLEVVVTGRITAYGAQSKYNMNVDEVAVAGKGALMAL 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LEKRKK+L EGLF K P+P++P+II V+TSPTGAVIRDIL R+ RFP +V+I+PV Sbjct: 120 LEKRKKQLEAEGLFEASRKRPLPYLPEIIGVVTSPTGAVIRDILHRLRDRFPRKVLIWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG++C E+A AI N L G PRPD+II+ARGGGS+EDLW FN+E + RA A S Sbjct: 180 AVQGEKCAPEVAAAIAGFNALVPGGALPRPDLIIVARGGGSVEDLWGFNEESVARAAAAS 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L + + +AR+ + + Sbjct: 240 DIPLISAVGHETDTTLIDFVSDKRAPTPTAAAELAVPVRHELIAWVEQQDARMRQALSQG 299 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L + +ALP D L R +D L L + R+ + ++ Sbjct: 300 LTRRDQRLRDVARALPRPDSLLESPRQLVDTRGARLAPALMSGVQRRKIRLADVSGSLRP 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L +Q + + EK + ++ + + L + + ++ + H Sbjct: 360 AMLTRAVQAEDRQLKEKARRLQPALLRALATRKEQLETRVRR--YRPAVLEQDYRRKKQH 417 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + ++ R+ + + + + R+ ++ +YK TL RG+ ++ ++ +T + Sbjct: 418 FEDVVQRLGKVGEQNLDAARRKLDALGRLNETLSYKATLARGFAVVR-SDGAVVTDSKTA 476 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 T + + I F DG+ V K K+ K QG LF Sbjct: 477 KTASSLEIQFADGRV--TVGGKTASKKSAGK-----------PPEQGSLF 513 >gi|148253225|ref|YP_001237810.1| exodeoxyribonuclease VII large subunit [Bradyrhizobium sp. BTAi1] gi|146405398|gb|ABQ33904.1| Exodeoxyribonuclease VII large subunit [Bradyrhizobium sp. BTAi1] Length = 536 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 204/538 (37%), Positives = 297/538 (55%), Gaps = 11/538 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M P + PE++VSELS LK VE HV VRGEI+G+RG HSSGH YF+LKD Sbjct: 1 MPPAEALP--NAPEFTVSELSSALKRTVEDQFGHVRVRGEITGFRGPHSSGHCYFALKDE 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I+A+IWKG ++ F P+EG+E + GK+TT+P SSKYQI+IE+L P+G G L+ + Sbjct: 59 SAKIEAVIWKGVHGRMRFKPQEGLEVIATGKLTTYPNSSKYQIVIEALEPAGIGALMALM 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK+KL EGLF K +P++P++I V+TSPTGAVIRDIL R+ RFP V+++PVK Sbjct: 119 EERKRKLGAEGLFDPARKQLLPWLPEVIGVVTSPTGAVIRDILHRLEDRFPRHVLVWPVK 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +++A AI N L E PRPD++I+ARGGGS+EDLW FN+E++VRA A S Sbjct: 179 VQGEGSAEQVAAAIRGFNDLPEDGPIPRPDVLIVARGGGSLEDLWSFNEEIVVRAAAESM 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + +L R++ R Sbjct: 239 IPLISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRSELMQEVASLARRVSVCWQRSQ 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + N L + +ALP + + L+ R RLD L L+ +R F ++ Sbjct: 299 EGRRNELRAAARALPGAAELLAIPRQRLDSAAASLPRALKTNTNVHFRQFAAASAKLTLR 358 Query: 361 FLIHNIQKNRQHILEKQQHIE---QIVKQHLRYIFLEKKEKIAILHMLREQTKNR-IFYL 416 L I + ++ + + + + R F + + Q K + I Sbjct: 359 VLHGQIAQADHRLIVSSERLSLSARALLHRRRERFEALDARFKASRLAYAQAKRQAIERE 418 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 ++L R L+ I V ++L + +Y++ L RG+ ++D + + Q Sbjct: 419 RDRTERLADRAARALATSISRLSARVDHAGQLLAALSYRSVLARGFALVRDDAGHPLHQA 478 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPT-----KKCQLHNNKREKQGTQGELF 529 ++ + I F DG A + + QG LF Sbjct: 479 ASIGPNAALSIEFADGVVAATAAAGRAAPVAAPPKTARETKPAAAKRSPDPADQGSLF 536 >gi|126461268|ref|YP_001042382.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides ATCC 17029] gi|158513432|sp|A3PGZ4|EX7L_RHOS1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|126102932|gb|ABN75610.1| Exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides ATCC 17029] Length = 519 Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 194/534 (36%), Positives = 282/534 (52%), Gaps = 22/534 (4%) Query: 1 MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ S + PE++VSELS +K ++E V VRGEI G +SGH YF LK Sbjct: 1 MSDLFEDPAPSRNTPEFTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + AI WKG ++ PEEG+E + G++TTFPG SKYQII+E + P+G+G L+ Sbjct: 60 DDRAVMAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKR+ L EGLF K P+PF+P++I V+TSP+GAVIRDIL R+ RFP V+I+P Sbjct: 120 MLEKRRAALAAEGLFDAGRKRPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG++C E+A AI NTL EG PRPD++I+ARGGGS+EDLW FN+E++VRA A Sbjct: 180 VAVQGEKCAPEVAAAIRGFNTLPEGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L ARL+ Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLELLAGLDGQGARLSRCAAE 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L L +ALP + ++ R D L L + + + ++ Sbjct: 300 TIRRRDQRLRDLARALPRLESLVAGPSQRFDLWSGRLSGALGQSVAARRARLEPLGAHLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + + ++ + +E + + A L + Sbjct: 360 PRLLADLVARQKDRLGDRTRSLETCLGRRAERARDRFDALSARLAPAFARLIAETERASR 419 Query: 419 H----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + L R++ ++ + R+ Q+ Y+ TLKRGY ++ + +T Sbjct: 420 RDAATLGTLAARLDAAPEARLARLSDRLEALDRLRQTLGYRETLKRGYAVVR-ADGAVLT 478 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 K + I F DG+ + +E+ QG L Sbjct: 479 TKAEAGAAAMLEIEFQDGRLSV--------------GRGKTRKPKEEPPAQGSL 518 >gi|260427057|ref|ZP_05781036.1| exodeoxyribonuclease VII, large subunit [Citreicella sp. SE45] gi|260421549|gb|EEX14800.1| exodeoxyribonuclease VII, large subunit [Citreicella sp. SE45] Length = 490 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 191/528 (36%), Positives = 271/528 (51%), Gaps = 39/528 (7%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S + PE+SVSELS +K ++E HV V+GE+ G SGH Y LKD+ Sbjct: 1 MDLL-DDDSGNTPEFSVSELSGAVKRVIEGEFGHVRVKGEV-GRVSRPRSGHIYLDLKDD 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S I I+WKG ++E PEEG+E + G++TTFPG SKYQI+IE + P+G G L+ L Sbjct: 59 RSVIAGIVWKGVAARLETQPEEGMEVVATGRLTTFPGQSKYQIVIEDIRPAGLGALMAML 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRK L EGLF K P+P++P++I V+TSP+GAVIRDIL R+ RFP +V+I+PV Sbjct: 119 EKRKALLQAEGLFDASRKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVA 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+ AI N L G PRPD++I+ARGGGS+EDLW FN+E + RA A S Sbjct: 179 VQGQNCAPEVVRAIEGFNALSPGGALPRPDLLIVARGGGSVEDLWGFNEEAVARAAAASQ 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L S R+ + + I Sbjct: 239 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAEIAVPVRMELLSWTGEAGVRMTRAMGQRI 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L L +ALP ++ L R RLD L L L ++ + + ++ Sbjct: 299 EVRSQRLRDLSRALPRAETLLDQPRQRLDLLGDRLPRALIRGTEQRRVALSDVAGALRPS 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L I R+ + + + + I + Sbjct: 359 LLTRVIAHGRESLGRRTDRLS------------------------LRPIEREIAQGRDRL 394 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R+E + ++ + +R+L++ +YK TL RGY ++ +T K Sbjct: 395 ATLSRRLEESATRRLDDPARKLDGLSRLLETLSYKGTLARGYAVVRSAEGTILTHKAAAQ 454 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + I F DG+ K QG L Sbjct: 455 NAAGLEIEFSDGRF-------------ALGGKARPKRKDTPAPEQGSL 489 >gi|299134218|ref|ZP_07027411.1| exodeoxyribonuclease VII, large subunit [Afipia sp. 1NLS2] gi|298590965|gb|EFI51167.1| exodeoxyribonuclease VII, large subunit [Afipia sp. 1NLS2] Length = 480 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 202/525 (38%), Positives = 288/525 (54%), Gaps = 48/525 (9%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + + + E++VSELS LK VE HV VRGEISG+RG H+SGH YF+LKD ++I Sbjct: 4 AAETLSNATEFTVSELSSALKRTVEDTYGHVRVRGEISGFRGPHASGHCYFALKDESAKI 63 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +A+IWKG ++ P+EG+E + GK+TT+PGSSKYQI+IE++ P+G G L+ +E+RK Sbjct: 64 EAVIWKGVHGRMRVKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGIGALMALMEERK 123 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 KKL EGLF + K +P++P++I VITSPTGAVIRDIL R+ RFP RV+++PV+VQG+ Sbjct: 124 KKLAAEGLFDESRKQLLPWLPEVIGVITSPTGAVIRDILHRLEDRFPRRVLVWPVRVQGE 183 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +++A AI N L+EG PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+I Sbjct: 184 GSAEQVAAAIEGFNALEEGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAASMIPLI 243 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + +L R R +++ Sbjct: 244 SAVGHETDITLIDFAADKRAPTPTAAAEMAVPVRADLAIEISSLARRSFACWQRGQEHRR 303 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L S + LP L+ R R DR +L L R + I R+ L Sbjct: 304 SELRSAARGLPKLTDLLAIPRQRFDRASAQLPRALRANTHVYDRRLSMIAGRLTVTTLRG 363 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + R + + + ++ I T I+ Sbjct: 364 QIARARDQVNRLSESARRC-------------------------SQQFIALRRTRIQ--- 395 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++L + +YK L RG+ ++D + + Sbjct: 396 -------------------HSAQMLAALSYKGVLSRGFALVRDETGLPLHHAAQVGAGEH 436 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I I F DG+ A PP + K + E + QG+LF Sbjct: 437 ISIEFADGRIAATAHG-TPPSAKKVAKPAKTADVPEHKKVQGDLF 480 >gi|220926374|ref|YP_002501676.1| exodeoxyribonuclease VII large subunit [Methylobacterium nodulans ORS 2060] gi|219950981|gb|ACL61373.1| exodeoxyribonuclease VII, large subunit [Methylobacterium nodulans ORS 2060] Length = 531 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 205/532 (38%), Positives = 289/532 (54%), Gaps = 36/532 (6%) Query: 2 NPFSQK----NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL 57 +P + PE+SV+EL+ LK +E HV +RGEISGYRG HSSGHAYFSL Sbjct: 31 SPLPASLAVAAPANAPEWSVTELAAALKRTLEDAFGHVRLRGEISGYRGPHSSGHAYFSL 90 Query: 58 KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 KD ++IDA+IWKGTL ++ P+EG+E + G+ITTFPG S YQIIIE+L P+G+G + Sbjct: 91 KDGGAKIDAVIWKGTLARLRHRPKEGLEVVATGRITTFPGKSAYQIIIEALEPAGAGAWM 150 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF 177 LE+R++ L EGLF K P+P++P+++ V+TSPTGAVIRDIL R+ RFP V+++ Sbjct: 151 ALLEERRRLLAAEGLFDAARKRPLPYLPRVVGVVTSPTGAVIRDILHRLEDRFPRPVLVW 210 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 PV+VQG+ +E+A AI + L PRPD++I+ARGGGSIEDLW FN+E++VRA A Sbjct: 211 PVRVQGEGSAEEVAAAIRGFSALAPDGPIPRPDVLIVARGGGSIEDLWSFNEEIVVRAAA 270 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S+IP+ISA+GHETD TL D+AAD RAPTPTGAAEMAVPV+ L + L L R + Sbjct: 271 ESAIPLISAVGHETDVTLIDHAADRRAPTPTGAAEMAVPVRLDLLADLDGLARRHAAALA 330 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R I+ + + L L + +P+ + L+ R RLD L L R ++ + Sbjct: 331 RSIERRRSDLRGLARVIPSPEALLAVKRQRLDLAEARLRPALAEGARTAQRRLARLLQAL 390 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + R+ AI H R + + Sbjct: 391 ARHPPALRLARARERF-------------------------AAIDHRPRHALERLVAVRS 425 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L R+ ++ + + + S Y+ L RGY + D + + Sbjct: 426 ERLNGLAQRLAQAQDRDLERRRSRFAGAAALFDSLNYRAVLARGYALVLDAEGRPLAEAE 485 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 RI + F DG+ A+V APP+ K+ QG LF Sbjct: 486 AARAAGRITVEFQDGKVAAVV-EGAPPRRAAAKRGP------AGPARQGSLF 530 >gi|329851150|ref|ZP_08265907.1| exodeoxyribonuclease VII, large subunit [Asticcacaulis biprosthecum C19] gi|328839996|gb|EGF89568.1| exodeoxyribonuclease VII, large subunit [Asticcacaulis biprosthecum C19] Length = 520 Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 192/529 (36%), Positives = 282/529 (53%), Gaps = 14/529 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 ++ + P YSVSEL+ LK +E HV +RGEIS H+SGH Y +LKD+ Sbjct: 6 LSAADSPAGSNAPAYSVSELAGALKRTLEQTYDHVRLRGEISKVT-RHASGHIYLTLKDD 64 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + ID +IWKG ++++ P+ G+E +V G+ITTFP SSKYQI+IE + +G G LL L Sbjct: 65 KANIDGVIWKGQASRLQTQPDYGLEVIVTGRITTFPASSKYQIVIEQMEVAGVGALLAQL 124 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+ K+KL EGLF + K P+P+ P+ I VITSPTGAVIRDIL RI R+P RVI++PV Sbjct: 125 ERLKQKLNAEGLFRPERKKPLPYAPRTIGVITSPTGAVIRDILHRIRDRWPCRVIVWPVV 184 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD P +I NA+ E PRPD+II+ARGGGS+EDLW FNDE + RA+ S Sbjct: 185 VQGDAAPPQIINALRGF----ESGAVPRPDVIIVARGGGSVEDLWPFNDEALARAVFACS 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPTGAAE+A PV L++ +LE R + R + Sbjct: 241 IPVISAVGHETDTTLIDHVSDRRAPTPTGAAELATPVIGELRALAADLERRRQACMSRGL 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L L +ALP + ++ RLD + + L +L + + F R+ Sbjct: 301 ETRREKLALLARALPRPTDLIDSAQQRLDFVAQRLTGSLSQNLNLHHNAFTKASARLSPL 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L ++ +RQ + Q + +K H+ L + + I H + Sbjct: 361 LLTRQVEHSRQRLDHAGQRLGGALKSHVDRATSRFAPLEGRLDGALTR-RLAIAQQHARL 419 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R+ + + + ++ S + L G+ ++ + +TQ ++ Sbjct: 420 PDLERRMGDAMQRLLSRQSERLQRLDQLRVSLSPTRPLDLGFALVERE-GHVVTQAAAVS 478 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG+ I + P + KK + G LF Sbjct: 479 AGDVLTLTFKDGKTTVIAGEGSAPPKPQPKKPSPPPQQ-------GSLF 520 >gi|312115900|ref|YP_004013496.1| exodeoxyribonuclease VII large subunit [Rhodomicrobium vannielii ATCC 17100] gi|311221029|gb|ADP72397.1| exodeoxyribonuclease VII, large subunit [Rhodomicrobium vannielii ATCC 17100] Length = 529 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 196/531 (36%), Positives = 286/531 (53%), Gaps = 9/531 (1%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + E++VSELS+ +K VE V +RGEISGYRG HSSGHAY LKD+ +R Sbjct: 1 MQAELLSNIAEFTVSELSFAIKRTVEDAYGLVRLRGEISGYRGQHSSGHAYLCLKDDKAR 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA+IW+GT + ++F PEEG+E +V G+ITTFPG S YQI+IE L P+G+G L+ LE+R Sbjct: 61 IDAVIWRGTFSHLKFKPEEGLEVIVTGRITTFPGKSSYQIVIEQLEPAGAGALMALLEER 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 KKKL EGLF + K P+PF P+++ ++TSPTGAVIRD+L + R P RVI++PV+VQG Sbjct: 121 KKKLAAEGLFDESRKRPLPFWPEVVGIVTSPTGAVIRDMLHGFTERCPTRVIVWPVRVQG 180 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + C E++ AI N L PRPD++I+ARGGGS+EDLW FN+E +VRA A S+IP+ Sbjct: 181 ETCGAEVSAAIRGFNALDGFGPLPRPDLLIVARGGGSLEDLWGFNEEAVVRAAAESAIPL 240 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETDWTL D AD RAPTPT AAE AVP L L R + R ++ Sbjct: 241 ISAVGHETDWTLIDLVADARAPTPTKAAEWAVPKHADLIIRLGECIERARRCVRRNLEQL 300 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + LP L R RLD L L R F R+ + Sbjct: 301 RAEFRGAERGLPRPHTLLQVPRQRLDTAGARLGQALIYFTERSRGRFERSAVRLSPRLVA 360 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + R+ + + + + + L+ T + + L Sbjct: 361 RPIVEARERLGRAATFNARAFRDVIVRKRERWTVRAERLNAGLLATPTQ--RGIERLLML 418 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R + +++ ++ ++LQS ++K+ L+RG+ ++D + I + +++ Sbjct: 419 AARADQAVTNLAHRHRQRLAALGQLLQSLSHKSVLERGFALVRDADGRVIRRAASVSAAA 478 Query: 484 RILINFFDGQAN------AIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + I F DG + + + + + ++K G QG L Sbjct: 479 ALDIEFADGHVQAHRAAADAEADTSASRRRSAAQVPRRATSKDKDG-QGTL 528 >gi|209966855|ref|YP_002299770.1| exodeoxyribonuclease VII, large subunit, putative [Rhodospirillum centenum SW] gi|259646298|sp|B6IXD4|EX7L_RHOCS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|209960321|gb|ACJ00958.1| exodeoxyribonuclease VII, large subunit, putative [Rhodospirillum centenum SW] Length = 523 Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 186/527 (35%), Positives = 284/527 (53%), Gaps = 10/527 (1%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 + + PE SV +L+ LK VE +V VRGEIS + HSSGH Y LKD + Sbjct: 7 DLPPRTGSNLPEMSVGDLARALKRTVEDAYGYVRVRGEISQPK-RHSSGHVYLRLKDETA 65 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++A+ WKG ++ PEEG+E + G++TT+PG S+YQ++IE++ +G G LL LE+ Sbjct: 66 VLEAVCWKGVAARLSVRPEEGMEVVCTGRLTTYPGRSQYQLVIETMELAGEGALLKMLEE 125 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182 RK++L EGLF+ + K P+PF+P++I V+TSPTGAVIRDIL R++ RFP V+++PV VQ Sbjct: 126 RKRRLAAEGLFAPERKKPLPFLPEVIGVVTSPTGAVIRDILHRLADRFPRHVLLWPVAVQ 185 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ ++A AI N + G PRPD+II+ARGGGS+EDL FN+E +VRA A S+IP Sbjct: 186 GEGAADQVARAIAGFNAIAPGGPVPRPDLIIVARGGGSLEDLMPFNEEAVVRAAAASAIP 245 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +ISA+GHETD TL D+A+D RAPTPT AAEMAVPV+ L + +++ RL+ + R I Sbjct: 246 LISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLAQVLDDGRRLHQCLSRAIDT 305 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + + + L + L + L RLD LE +L + R++ + R++ Sbjct: 306 RRSHVEGLGRGLGDPRALLEGCIQRLDDRAERLELSLRTGLERRHAAVQQLGIRLR--HP 363 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 I + + + + L L + +I + Sbjct: 364 REVIGLAAARADAAGRALRAGFDRAVTVEQGRFHRVADRLSPLP--LRRQIDAGRDRLDA 421 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 L R+ + ++ + ++L+S++YK L+RG+ + D +T+ + A Sbjct: 422 LPPRLAQAHARRLDQAGQRLVALGQLLESYSYKGVLERGFVLVADAEGRPVTRAADTAPG 481 Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG A+V AP + QG LF Sbjct: 482 QPVALRFADGTVGAVVDGAAPGASPAARTRAGKAK-----ADQGSLF 523 >gi|86748982|ref|YP_485478.1| exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris HaA2] gi|86572010|gb|ABD06567.1| Exodeoxyribonuclease VII large subunit [Rhodopseudomonas palustris HaA2] Length = 538 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 203/534 (38%), Positives = 304/534 (56%), Gaps = 8/534 (1%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + E++VSELS LK VE + HV VRGEISG+RG HSSGH YF+LKD ++ Sbjct: 5 LAPETLANVGEFTVSELSQALKRTVEDSYGHVRVRGEISGFRGAHSSGHCYFALKDESAK 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I+A+IWKG ++ F P+EG+E + GK+TT+PGSSKYQI+IE+L P+G G L+ +E+R Sbjct: 65 IEAVIWKGVAGRMRFKPQEGLEVIATGKLTTYPGSSKYQIVIEALEPAGVGALMALMEER 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF + K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PVKVQG Sbjct: 125 KRKLGAEGLFDEARKQLLPYLPEVIGVVTSPTGAVIRDILHRLEDRFPRRVLVWPVKVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +++A AI N L EG PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+ Sbjct: 185 EGSAEQVAAAIHGFNALPEGGPIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAESMIPL 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + + R+ R + Sbjct: 245 ISAVGHETDVTLIDFAADKRAPTPTAAAEMAVPVRAELFVEVQSYARRMMLCWSRGQDSR 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 N L + +ALP + + L+ R RLD L L +R + + I + L Sbjct: 305 RNELRAAARALPAAGELLAIPRQRLDGAASSLPRALRANTHAHHRRYAKAASGITLNVLR 364 Query: 364 HNIQKNRQHILEKQQHIE---QIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLHTH 419 + + Q + + ++ + +H R F ++ + EQ + RI Sbjct: 365 AQVSHSAQRLGSTGERLKHCTRATLRHRRDRFESLAIRLQASKLANEQAQRMRIARERER 424 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + +L R + + + ++L + +Y+ L RG+ ++D + + + + Sbjct: 425 MLRLAERARRAWATLRDRQQARLVQSGKLLTALSYRGVLARGFALVRDADGHALHAAAAV 484 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE----QPTKKCQLHNNKREKQGTQGELF 529 + R+ + F DG+ + T + + K QG LF Sbjct: 485 SAGARLSVEFADGRVGVTADGGGATRPDIAKPATPAAKPAPKRVSKPIDQGSLF 538 >gi|254485812|ref|ZP_05099017.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. GAI101] gi|214042681|gb|EEB83319.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. GAI101] Length = 491 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 194/530 (36%), Positives = 280/530 (52%), Gaps = 40/530 (7%) Query: 1 MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + + PE++V+ELS +K ++ES HV +RGE+ G SGH Y LKD Sbjct: 1 MDLIDEPAPGQNSPEFTVTELSSAIKRVIESEFGHVRIRGEV-GRVSRPRSGHIYLDLKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + S I +IWKG ++E PEEG+E + G+ITTF G SKYQI+IE + P+G G L+ Sbjct: 60 DASVISGVIWKGVAARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LEKRK L EGLF+ + K +P++P +I V+TSP+GAVIRDIL R+ RFP +V+I+PV Sbjct: 120 LEKRKAALAAEGLFAPERKRALPYLPDVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +C E+A AI N L G PRPD++I+ARGGGS+EDLW FN+E++ RA A S Sbjct: 180 AVQGAKCAPEVARAIEGFNKLTFGGAIPRPDLLIVARGGGSVEDLWGFNEEIVARAAALS 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+ L + L EAR+ + + Sbjct: 240 EIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELVALLDGQEARMTRALSQG 299 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L + +ALP +D L R R+D L L L + ++ +I ++ Sbjct: 300 LARRDQRLRDMARALPRADSLLDGPRQRVDVLGGRLGPALTAGVQKRKVRLANISGVLRP 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L +Q ++ + E Sbjct: 360 GTLTRALQSEQRRLAGLSARF------------------------RPEALVQDQKRKAEA 395 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + L R+ + ++ R+ + +YK+TL RGY ++ + +T K+ Sbjct: 396 FQSLARRLSDAGLRQTAGWRKQIAGLDRVHEMLSYKSTLARGYAVVRG-DGKLVTTKKAA 454 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 T + I F DG+ V KA P++ K QG LF Sbjct: 455 QDATSLEIEFADGRM--QVGGKAGPRKAAKK-----------PPEQGSLF 491 >gi|159045267|ref|YP_001534061.1| exodeoxyribonuclease 7 large subunit [Dinoroseobacter shibae DFL 12] gi|157913027|gb|ABV94460.1| exodeoxyribonuclease 7 large subunit [Dinoroseobacter shibae DFL 12] Length = 523 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 190/533 (35%), Positives = 282/533 (52%), Gaps = 14/533 (2%) Query: 1 MNPFS----QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 M+ F + + PE++VSELS +K +E V VRGEI G SGH YF Sbjct: 1 MSDFDLIDDPQPGQNAPEFTVSELSGAIKRTLEGEFGRVRVRGEI-GRVMRAKSGHLYFD 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 LKD + I+ WKG ++ + +PEEG+E + GK++ + +S+Y I ++ + +G G L Sbjct: 60 LKDARAVINCTTWKGQVSGLGVMPEEGLEVVAEGKLSAYAPASRYNINVDRISVAGIGAL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVII 176 + LEKRK L EGLF K P+PF+P++I V+TSP+GAVIRDIL R+ R P +V+I Sbjct: 120 MAMLEKRKAALTAEGLFEASRKQPLPFLPEVIGVVTSPSGAVIRDILHRLRDRCPRKVLI 179 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 +PV VQG C E+ANAI N L G PRPD++I+ARGGGS+EDLW FN+E++VRA Sbjct: 180 WPVAVQGQNCAPEVANAIRGFNALGPGGPLPRPDLLIVARGGGSLEDLWGFNEEIVVRAA 239 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A S IP+ISA+GHETD TL DYAAD RAPTPT AAE AVPV+ L ++L +L +R+ + Sbjct: 240 AESDIPLISAVGHETDTTLIDYAADWRAPTPTAAAERAVPVRLDLLAALDSLGSRMLTGL 299 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + + L +ALP S+ LS R RLD L L K Sbjct: 300 TGGVRARAQRVRDLSRALPRSEDLLSTPRQRLDHATARLPAALRSATQTKRGALTQAAAV 359 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 ++ L I+ R+ + + + + + + ++A L E Sbjct: 360 LRPRLLAGRIEAERKDLRAASARLGAALPRAVAAQAERLRTRVARL--RGEILTQGRARD 417 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 ++ L R+ + ++++ ++ R+ + Y+ TLKRGY ++D + + +T Sbjct: 418 QQRLEALSARLSRAGTAQVRTWRRTLDGLDRVRATVGYEATLKRGYAVVRDQD-SIVTTA 476 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 AT + + F DG+ I P + QG LF Sbjct: 477 AAAATHPSLEVQFADGRVTVI------PNASAEGARPRKGRSKSAPDDQGSLF 523 >gi|110679217|ref|YP_682224.1| exodeoxyribonuclease VII large subunit [Roseobacter denitrificans OCh 114] gi|109455333|gb|ABG31538.1| exodeoxyribonuclease VII, large subunit, putative [Roseobacter denitrificans OCh 114] Length = 513 Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats. Identities = 179/530 (33%), Positives = 280/530 (52%), Gaps = 18/530 (3%) Query: 1 MNPFSQK-NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + PE++VSE+S +K +E V VRGE+S SGH Y+ +KD Sbjct: 1 MDLLDDPTPGQNTPEFTVSEISGAVKRTLEGEFGRVRVRGEVS-RVIRARSGHMYYDIKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +++ WKG + ++ +PEEG+E +V G+IT + SKY + ++ + +G G L+ Sbjct: 60 DRNQLACTTWKGQVARLSVIPEEGLEVVVTGRITAYGAQSKYNMNVDEVAVAGKGALMAL 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LEKRKK+L EGLF K P+P++P+II V+TSPTGAVIRDIL R+ RFP +V+I+PV Sbjct: 120 LEKRKKQLQAEGLFEASRKRPLPYLPEIIGVVTSPTGAVIRDILHRLRDRFPRKVLIWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ C E+A AI N L G PRPD+II+ARGGGS+EDLW FN+E + RA A S Sbjct: 180 AVQGERCAPEVAAAIAGFNALAPGGALPRPDLIIVARGGGSVEDLWGFNEESVARAAAAS 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+ L + + +AR+ + + Sbjct: 240 DIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELIAWVEQQDARMRQALSQG 299 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L + +ALP D L R +D L L + R+ + ++ Sbjct: 300 LTRRDQRLRDMARALPRPDSLLESPRQLVDTRGARLAPALMSGVQRRKIRLADVSGSLRP 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L +Q + + EK + ++ + + L + + ++ + H Sbjct: 360 AMLTRAVQAEDRQLKEKVRRLQPALLRALATRKEQLETRVRR--YRPAVLEQEYRRKKQH 417 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ R+ + + + + R+ ++ +YK TL RG+ ++ + +T + Sbjct: 418 FDDVVHRLGKVGEQNLDAARRKLDALGRLNETLSYKATLARGFAVVR-ADGAVVTDSKTA 476 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 T + + I F DG+ + P + K QG LF Sbjct: 477 KTASSLEIQFADGRVT---LGGKPASRKSAGK----------PPEQGSLF 513 >gi|83955626|ref|ZP_00964206.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp. NAS-14.1] gi|83839920|gb|EAP79096.1| exodeoxyribonuclease VII, large subunit [Sulfitobacter sp. NAS-14.1] Length = 515 Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats. Identities = 195/530 (36%), Positives = 283/530 (53%), Gaps = 40/530 (7%) Query: 1 MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + + PE++V+ELS +K ++E HV +RGE+ G SGH Y LKD Sbjct: 25 MDLIDDPREGQNSPEFTVTELSGAIKRVIEGEFGHVRIRGEV-GRVSRPRSGHIYLDLKD 83 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + S I +IWKG ++E PEEG+E + G+ITTF G SKYQI+IE + P+G G L+ Sbjct: 84 DSSVISGVIWKGVSARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 143 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LEKRK L EGLF+ + K P+P++P++I V+TSP+GAVIRDIL R+ RFP +V+I+PV Sbjct: 144 LEKRKAVLAAEGLFAPERKRPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 203 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +C E+A AI N L G PRPD++I+ARGGGS+EDLW FN+E++ RA A S Sbjct: 204 AVQGAKCAPEVARAIAGFNALTPGGALPRPDLLIVARGGGSVEDLWGFNEEIVARAAAAS 263 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+ L + L EAR+ + + Sbjct: 264 EIPLISAVGHETDTTLIDYVSDKRAPTPTAAAELAVPVRHELVALLDGQEARMTQALSQG 323 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L + +ALP D L R RLD L L + ++ H + I ++ Sbjct: 324 LARRDQRLRDMARALPRPDSLLDGPRQRLDMRGARLGPALTAGVQKRKVHLSDISGALRP 383 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L ++Q ++ + R Sbjct: 384 ATLRRSLQAEQRRLAALADRFRPDALVQDR------------------------KRKEEA 419 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + L R+ + + H ++ R+ + +YK+TL RGY ++ + +T K+ Sbjct: 420 FQSLARRLSDAGQRQTQGWHKQIAGLDRLHEMLSYKSTLARGYAVVRG-DGGVVTTKQAA 478 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + I F DG+ + A PK+ P K QG LF Sbjct: 479 LDASALEIEFIDGKMK--ISGGAAPKKTPKKAP-----------EQGSLF 515 >gi|209886360|ref|YP_002290216.1| exodeoxyribonuclease VII, large subunit [Oligotropha carboxidovorans OM5] gi|209874556|gb|ACI94352.1| exodeoxyribonuclease VII, large subunit [Oligotropha carboxidovorans OM5] Length = 486 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 199/529 (37%), Positives = 290/529 (54%), Gaps = 52/529 (9%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 ++ + E++VSELS LK VE HV VRGEISG+RG H+SGH YF+LKD ++I+ Sbjct: 5 SESLSNTAEFTVSELSSALKRTVEDAYGHVRVRGEISGFRGPHASGHCYFALKDESAKIE 64 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 A+IWKG ++ P+EG+E + GK+TT+PGSSKYQI+IE++ P+G G L+ +E+RK+ Sbjct: 65 AVIWKGVHGRMRVKPQEGLEVIATGKLTTYPGSSKYQIVIEAIEPAGVGALMALMEERKR 124 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 KL EGLF D K +P++P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+VQG+ Sbjct: 125 KLAAEGLFDDARKQLLPWLPEVIGVVTSPTGAVIRDILHRLHDRFPRRVLVWPVRVQGEG 184 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 ++IA AI N L+EG PRPD++I+ARGGGS+EDLW FN+E++VRA A S IP+IS Sbjct: 185 SAEQIAAAIEGFNALEEGGAIPRPDLLIVARGGGSLEDLWSFNEEIVVRAAAGSMIPLIS 244 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + +L R R +++ + Sbjct: 245 AVGHETDITLIDFAADKRAPTPTAAAEMAVPVRADLAIEISSLARRAFACWQRGHEHRRS 304 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + LP L+ R R DR +L L R + + R+ L Sbjct: 305 ELRGAARGLPRLTDLLAIPRQRFDRAAAQLPRALRANTHVYDRRLSMVTGRLTVTTLRTQ 364 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I ++R + + +I K+ + ++ + Sbjct: 365 IARSRDQV----NRLSEIAKRCSDHFIALRRNR--------------------------- 393 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 V + ++L + +YK+ L RG+ ++D + + RI Sbjct: 394 ----------------VQHSAQMLAALSYKSVLSRGFALVRDEAGQPLHHAAQVGAGERI 437 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT-----QGELF 529 I F DG+ A A P + + + QG+LF Sbjct: 438 SIEFADGRIAATTHGPAVPAAKNVSPARKPAKAEKAAKPEPKKVQGDLF 486 >gi|163746079|ref|ZP_02153438.1| exodeoxyribonuclease VII, large subunit, putative [Oceanibulbus indolifex HEL-45] gi|161380824|gb|EDQ05234.1| exodeoxyribonuclease VII, large subunit, putative [Oceanibulbus indolifex HEL-45] Length = 524 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 191/526 (36%), Positives = 287/526 (54%), Gaps = 24/526 (4%) Query: 1 MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ F + PE++V+ELS +K ++E +HV +RGE+ G SGH Y LKD Sbjct: 1 MDLFDDPAPGANSPEFTVTELSGAIKRVIEGEFAHVRIRGEV-GRVSRPRSGHVYLDLKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + S I +IWKG ++E PEEG+E + G+ITTF G SKYQI+IE + P+G G L+ Sbjct: 60 DRSVISGVIWKGVTARLETQPEEGMEVIATGRITTFGGQSKYQIVIEDIKPAGMGALMAL 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LEKRK L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+I+PV Sbjct: 120 LEKRKAALAAEGLFAPERKRPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +C E+ AI N L G PRPD++I+ARGGGS+EDLW FN+E +VRA A S Sbjct: 180 AVQGAKCAPEVVRAIEGFNRLTPGGALPRPDLLIVARGGGSVEDLWGFNEESVVRAAAAS 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L + L AR+ + + Sbjct: 240 DIPLISAVGHETDTTLIDFVSDKRAPTPTAAAELAVPVRHELAAWLEGQGARMRQALSQG 299 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + + +ALP +D L R RLDR +L L + + H+ ++ Sbjct: 300 LTRRGQRMRDVARALPRADTLLEGPRQRLDRGGEKLAPALIAGVQGRRVKLAHMSGALRP 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH---------MLREQTK 410 L ++ +RQ + ++ +++L+ K ++ H RE+ Sbjct: 360 GTLRRHLDADRQRLANLSARLDPAWQRNLKGRNDFLKTRLDRFHPEVLQRQILRRRERLA 419 Query: 411 NR------------IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 +R + + +++ R+ + R L + Y+ TL Sbjct: 420 DRTQNFRPEVLSRDLARQDQRLTEVLARLARAGQAAQDRRRRQIDALGRTLGTLGYRETL 479 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 RG+ ++ + N +T + TR+ I F D + + AP Sbjct: 480 ARGFAVVRG-DGNVVTSAEAAKSATRLEIEFADDRLEVLHKEDAPS 524 >gi|295690267|ref|YP_003593960.1| exodeoxyribonuclease VII large subunit [Caulobacter segnis ATCC 21756] gi|295432170|gb|ADG11342.1| exodeoxyribonuclease VII, large subunit [Caulobacter segnis ATCC 21756] Length = 510 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 179/535 (33%), Positives = 278/535 (51%), Gaps = 31/535 (5%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + N + P YSVSEL++ LK +E V +RGE+S HS+GH Y ++KD+ Sbjct: 1 MTDLAP-NDSNAPPYSVSELAFALKRTLEDRYGFVRLRGELSKVTH-HSNGHVYLTIKDD 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + ID ++WKG + + PE G+E +V GKITT+P S+YQI+I+S+ +G G LL L Sbjct: 59 KAAIDGVVWKGNVRGLGVRPEHGLEVIVTGKITTYPAGSRYQIVIDSMEAAGVGALLAQL 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+ K KL EGLF+ + K P+P +P ++ VITSPTGAVIRDIL RI R+P +V+++PV Sbjct: 119 ERLKAKLAAEGLFAPERKRPLPSMPAVVGVITSPTGAVIRDILHRIRDRWPCQVLVWPVV 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD +++ A+ N ++ G PRPDI+I+ARGGGS+EDLW FNDE + R +A S+ Sbjct: 179 VQGDAAAAQVSAAVRGFNAIQPGGPVPRPDILIVARGGGSVEDLWAFNDEALARTVAESA 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPT AAEMA PV L++ + + + RL+ R I Sbjct: 239 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAEMATPVLGELRALISDFDRRLSRCGARTI 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L S + LP + L+ ++ R D L+ L + + R+ D Sbjct: 299 EERRTRLTSAARGLPRPNDLLALAQQRFDMASGRLDAALHRNTAVHAQDLLKVTARLTPD 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L + + + + + + + + + Sbjct: 359 ALRRQHAAKADRVADLGRRLNACGTRSVERVRDHAR-----------------------L 395 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L TR+ ++ ++ ++ S + L+ G+ ++ + I LA Sbjct: 396 PLLWTRLGSAAERRLTRAEDQLTNLDKLRLSLNPRRPLELGFALVRKADGTIIRSAGALA 455 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG------TQGELF 529 + + F DG+ A++ N+APP + QG+LF Sbjct: 456 LGDHVALQFADGEREAVIGNEAPPSASTPSASTPPRPSPPRPKPAPSSTEQGDLF 510 >gi|254474563|ref|ZP_05087949.1| exodeoxyribonuclease VII, large subunit [Ruegeria sp. R11] gi|214028806|gb|EEB69641.1| exodeoxyribonuclease VII, large subunit [Ruegeria sp. R11] Length = 521 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 185/541 (34%), Positives = 278/541 (51%), Gaps = 39/541 (7%) Query: 2 NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 +P + + PE++VSE+S +K +E + V+GE+ G SGH Y+ +KD+ Sbjct: 7 DPAPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIKDD 65 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S + WKG ++ + +PEEG+E +V G++T F G SKY + ++ + +G G L+ L Sbjct: 66 RSVLACTTWKGQISSLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMALL 125 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRKK+L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+++PV Sbjct: 126 EKRKKQLESEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+A AI N L G PRPD+II+ARGGGSIEDLW FN+E++ RA A S Sbjct: 186 VQGANCAAEVARAIDGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAGSQ 245 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L + ARL + + Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELLGWVEQQGARLTRGAGQAV 305 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + LN L +ALP D L R RLD++ L L + R+ + ++ Sbjct: 306 QIRRQRLNDLSRALPKPDTLLETPRQRLDQVSYRLPDALIRGVDRRRLKLSEAAASLRPA 365 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L +Q R + + + + + Sbjct: 366 TLRQLVQGRRDGLKNLSSRLS------------------------LRPIEREVARQGDRL 401 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +L R+ + S +++ + T R L+ +YK TL RGY ++ ++ +T+ Sbjct: 402 TQLAQRMNALQSQRLQQARRGLDATGRQLEILSYKATLDRGYAVVRHGSD-VVTRAAGAR 460 Query: 481 TKTRILINFFDGQANA----------IVINKAPPKEQPTKKCQLHNN--KREKQGTQGEL 528 + I F DG+ V P+K + G QG L Sbjct: 461 GADHLRIEFADGEIAVHPDGSDAGAKTVQQSTAQTSAPSKPAARKPKADPGQDDGGQGTL 520 Query: 529 F 529 F Sbjct: 521 F 521 >gi|257464609|ref|ZP_05628980.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor 202] gi|257450269|gb|EEV24312.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor 202] Length = 486 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 138/492 (28%), Positives = 251/492 (51%), Gaps = 12/492 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + +V++L+Y ++H++E+ L + + GEIS + SGH Y +LKD ++++ ++K Sbjct: 2 NNILTVTQLNYSVRHLLETELGQIWLTGEISNF-SQPVSGHWYLTLKDENAQVRCAMFKM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 +++ F P+ G++ LV ++ + YQ+IIES+ P+G G L E+ K KL +G Sbjct: 61 KNSRVTFYPQNGMQVLVRASVSLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKMKLAAQG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ +HK +P K + +ITS +GA ++DIL + R P L V+I+P VQG E ++I Sbjct: 121 LFAQEHKKALPDFVKRVGIITSSSGAALQDILNILKRRDPSLAVVIYPTLVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 181 VQTIDLANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAYAIYRSEIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +N R+ K+ L Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELIRQLQHHFNMVNLAFDRIWHEKLTHFQQL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + L + R ++L +E +++ ++ ++ + R++ + Sbjct: 295 NLRLNAQHPSKYLHVFKIRFEQLAYRMEKSVKSLLSTRHNQLTQVFLRLQPHHPKRKLDV 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ + +++ + Q + Q+L + + + +I +I L ++ Sbjct: 355 QREQLAQREGRLHQQMSQYLSRKKQDWENLTKRIESSP--LPYQIGKRQQYIAHLAQQLN 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + + + L + L RGY+ Q + + +T + +A +++ Sbjct: 413 YAMDKRYLKEYQRFQALCTRLDGLSPLKILGRGYSITQTSKGHILTNAKEVAVGDKLITQ 472 Query: 489 FFDGQANAIVIN 500 GQ + V+ Sbjct: 473 LETGQIISEVVE 484 >gi|119386735|ref|YP_917790.1| exodeoxyribonuclease VII, large subunit [Paracoccus denitrificans PD1222] gi|119377330|gb|ABL72094.1| Exodeoxyribonuclease VII large subunit [Paracoccus denitrificans PD1222] Length = 519 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 190/533 (35%), Positives = 280/533 (52%), Gaps = 18/533 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F + + E++VSE+S +K ++E V VRGEI G SSGH YF LKD+ Sbjct: 1 MELFEDTPASNAHEFTVSEISGAVKRVLEGEFGRVRVRGEI-GRVSRPSSGHLYFDLKDD 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + I A+ WKG ++ PEEGIE + G++TTFPG SKYQ+I+E + P+G+G L+ L Sbjct: 60 RAVIAAVTWKGQAARLSTRPEEGIEVIATGRLTTFPGQSKYQLIVEEIEPAGAGALMMML 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EK +K L EGLF + K P+P++P++I V+TSP+GAVIRDIL R+ RFP V+I+PV Sbjct: 120 EKCRKALAAEGLFDESRKRPLPYLPRVIGVVTSPSGAVIRDILHRLRDRFPTHVLIWPVA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ C ++ AI N L PRPD+II+ARGGGS+EDLW FN+E +VRA A+S Sbjct: 180 VQGEGCASQVTAAIRGFNALPSDGPLPRPDLIIVARGGGSLEDLWGFNEEAVVRAAADSL 239 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+D RAPTPT AAEMAVPV+ L + L ++AR+ Sbjct: 240 IPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRAELAARLTEIQARMMRAAQTRN 299 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L+ L +AL + +R R D LE L + + N + + Sbjct: 300 QRQRQRLSDLGRALGRPQALTAPARQRFDLFAERLEPALRGFVRARRDRLNAL--PLSLS 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ----TKNRIFYL 416 L ++ R + + Q + + + + + + L R + +I Sbjct: 358 ALRAMLRNRRDALQAQAQRLPLCLARLGQRRSERLTDLGSRLERARARMLADAARQIVRD 417 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 + +L R+ + ++ R+ Q+ Y+ TL+RG+ + + +T Sbjct: 418 RGTLDRLAARLSAAGGRLLAPRRDALERLDRLRQTLGYRETLRRGFAVVHGPSG-LLTHA 476 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 A R I F DG+ A P K + Q LF Sbjct: 477 AEAAQTPRFEIEFLDGRMAAR----------PDAPPAKPARKPREPKGQKSLF 519 >gi|16126485|ref|NP_421049.1| exodeoxyribonuclease large subunit [Caulobacter crescentus CB15] gi|221235265|ref|YP_002517702.1| exodeoxyribonuclease VII large subunit [Caulobacter crescentus NA1000] gi|22095679|sp|Q9A649|EX7L_CAUCR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783694|sp|B8GYM1|EX7L_CAUCN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|13423755|gb|AAK24217.1| exodeoxyribonuclease large subunit [Caulobacter crescentus CB15] gi|220964438|gb|ACL95794.1| exodeoxyribonuclease VII large subunit [Caulobacter crescentus NA1000] Length = 505 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 174/530 (32%), Positives = 277/530 (52%), Gaps = 26/530 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S + P YSVSEL++ LK +E V +RGE+S HS+GH Y ++KD+ Sbjct: 1 MSDLPPTDS-NAPPYSVSELAFALKRTLEDRYGFVRLRGELSKVTH-HSNGHVYLTIKDD 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S ID ++WKG + + PE G+E +V GKITT+P S+YQI+I+S+ +G G LL L Sbjct: 59 KSAIDGVVWKGNVRGLGVRPEHGLEVIVTGKITTYPAGSRYQIVIDSMEAAGVGALLAQL 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+ K KL EGLF+ + K P+P +P ++ VITSPTGAVIRDIL RI R+P +V+++P Sbjct: 119 ERLKAKLAAEGLFAPERKRPLPSMPAVVGVITSPTGAVIRDILHRIRDRWPCQVLVWPCV 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD +++ AI N ++ G PRPD++I+ARGGGS+EDLW FNDE + R +A + Sbjct: 179 VQGDAAAGQVSAAIRGFNAIQPGGPVPRPDVLIVARGGGSVEDLWAFNDEGLARTVAEGT 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPT AAEMA PV L++ + +L+ RLN R I Sbjct: 239 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAEMATPVLAELRALISDLDRRLNRCGARTI 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L S + LP + L+ ++ R D L+ L+ + + R+ + Sbjct: 299 EERRTRLVSAARGLPRPNDLLALAQQRFDIASGRLDAALDRNTTVHAQSLLKVTARLTPE 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L + + + + ++ ++ + + + Sbjct: 359 ALGRQRAVKAERLADLSRRLDLAARRAPDRVAQHAR-----------------------L 395 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R+ +++ + ++ QS + L+ G+ ++ + +L Sbjct: 396 PALWDRLNAAGQRRLQRDADRLENLEKLRQSLNPERPLELGFALVRKGDGTLARSAADLV 455 Query: 481 TKTRILINFFDGQANAIVI-NKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + R+ + F G +A++ P + QG+LF Sbjct: 456 SGERVNLKFKSGDRDAVIDGEGGPAPAPTAPAPKPRPKPAAPPAGQGDLF 505 >gi|114328962|ref|YP_746119.1| exodeoxyribonuclease VII large subunit [Granulibacter bethesdensis CGDNIH1] gi|114317136|gb|ABI63196.1| exodeoxyribonuclease VII large subunit [Granulibacter bethesdensis CGDNIH1] Length = 543 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 170/523 (32%), Positives = 271/523 (51%), Gaps = 11/523 (2%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + PEYSVS+LS +K +E V VRGE++ + SGH Y SLKD +I ++WK Sbjct: 25 NIPEYSVSDLSGTIKRTLEGAFGRVRVRGELTEVKRYP-SGHIYLSLKDEGGKIAGVVWK 83 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + ++ LPE G+E + GKI+++ S YQ+II+ + +G+G LL +E +++L EE Sbjct: 84 FAVPRLGMLPENGVEVVATGKISSYADRSSYQLIIDRMEYAGAGALLARIEMLRQRLAEE 143 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF K +P +P+++ V++S GAV++DI I+ RFP V+++PV VQG+ +I Sbjct: 144 GLFDAARKRALPRLPRVVGVVSSEKGAVLQDIRTTIARRFPRTVLLWPVPVQGEGAAAKI 203 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI L PRPD++I+ARGGGS+EDL FN+E+++RA A IP+ISA+GHE Sbjct: 204 AAAIDGFGRLPPDGPVPRPDVLIVARGGGSLEDLMAFNEEIVIRAAAACPIPVISAVGHE 263 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TL DYA+D RAPTPT AAE+AVP++ L + L + ARL + R+ + L Sbjct: 264 TDTTLIDYASDRRAPTPTAAAELAVPMRAELTADLAHKTARLGGALSRMTQGAWLGLAQA 323 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + LP+ L +R RLD L L ++ + + ++ H I + R Sbjct: 324 ERLLPDLPTLLGHARQRLDDRSLRLGMALPGLLAARRAGLRNAA--LRLPRPAHIITQTR 381 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 QH+ + + + L + + L ++ + + L R+ Sbjct: 382 QHLRGAENSLRVAMPMLLAHKRSALRLHALRLGA---SLRHSLHLHLGDARPLFVRMRAA 438 Query: 431 -LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L +++ + L+S +Y+ L RGY + D + + +TQ +A+ + + F Sbjct: 439 PLPGRLREAQARLDGLCARLESVSYQAVLARGYALVLDHDGHAVTQAARIASGQILTLRF 498 Query: 490 FDGQANAIVI----NKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 DG+ PP T + K+ QG+L Sbjct: 499 SDGEKTVQATHNPAGSTPPAGNDTASVKRTARKKSGPQKQGDL 541 >gi|188583526|ref|YP_001926971.1| exodeoxyribonuclease VII, large subunit [Methylobacterium populi BJ001] gi|179347024|gb|ACB82436.1| exodeoxyribonuclease VII, large subunit [Methylobacterium populi BJ001] Length = 548 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 199/535 (37%), Positives = 276/535 (51%), Gaps = 61/535 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + PE+SV +L+ LK +E HV +RGEISGYRG H SGHAYFSLKD ++IDA++ Sbjct: 61 QANAPEWSVGDLAAALKRTLEDAFGHVRLRGEISGYRGPHGSGHAYFSLKDGSAKIDAVV 120 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 WKG L ++ P+EG+E + GKITTF G S YQI+I+S+ P+G G + LE+RK+ L Sbjct: 121 WKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALLEERKRLLA 180 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EGLF + K PIPF+P+++ V+TSPTGAVIRDIL R+ RFP V+++PV+VQG+ Sbjct: 181 AEGLFEAERKRPIPFLPRVVGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVRVQGEGAAD 240 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA AI N L G PRPD++I+ARGGGSIEDLW FN+E +VRA A S IP+ISA+G Sbjct: 241 EIAAAIRGFNALIPGGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESGIPLISAVG 300 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TL D+A+D RAPTPTGAAEMAVPV+ L + + +L AR ++R I+ + Sbjct: 301 HETDTTLIDFASDRRAPTPTGAAEMAVPVRAELLAQIHDLGARQAGTMLRRIERERADFR 360 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 +L++A+P +D L+ R RLD L L N + +R+ + + Sbjct: 361 ALVRAIPGADAFLAAKRQRLDLADARLRPALAANARDSRERLNRLADRLTRRSPAIALAE 420 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R + Sbjct: 421 ARARLAGIDHRPRTA--------------------------------------------- 435 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ I+ + +L + +YK L RGY ++D + + A R+ + Sbjct: 436 --IARIIERRRDRLGAQAGLLGALSYKAVLARGYALVRDADGLPVRSSEAAAAAARLQLQ 493 Query: 489 FFDGQANAIVI----NKAPPKEQPTKKCQLHNNKRE----------KQGTQGELF 529 F DG A PP K+ QG LF Sbjct: 494 FADGAVFARPEEGPAEIPPPPASRPKRAPRRAAPEPARTAAEAVSEPAARQGSLF 548 >gi|260433213|ref|ZP_05787184.1| exodeoxyribonuclease VII, large subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260417041|gb|EEX10300.1| exodeoxyribonuclease VII, large subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 516 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 181/531 (34%), Positives = 269/531 (50%), Gaps = 36/531 (6%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PEY+VSE+S +K +E + VRGE+ G SGH Y+ +K Sbjct: 20 MSDLLDDPIPGQNTPEYTVSEISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 78 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + WKG + + +PEEG+E +V G++T F SKY + ++ + +G G L+ Sbjct: 79 DDRNVLACTTWKGQIAGLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMA 138 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRKK+L EGLF+ + K P+PF+P+II V+TSP+GAVIRDIL R+ RFP +V+I+P Sbjct: 139 LLEKRKKQLESEGLFAPERKKPLPFLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 198 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG C E+ANAI N L G PRPD+II+ARGGGSIEDLW FN+E++ RA A Sbjct: 199 VAVQGANCASEVANAIRGFNRLAPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAA 258 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+ L + ARL+ Sbjct: 259 SEIPLISAVGHETDTTLIDYVSDRRAPTPTAAAELAVPVRMELLAWTGEQGARLSRAATD 318 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L L +ALP + L R RLD + L L+ + + + ++ Sbjct: 319 AVQRRAQRLRDLSRALPRPETLLDGPRQRLDLIADRLAPALQRGVQNRRLQVVELSGHLR 378 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + R + + + I Sbjct: 379 PSTLRNLVAARRDTLRNLSSRLS------------------------IRPIQRDIQQQRD 414 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + +L R+ + ++ + T R+ ++ +YK TL+RGY + + +T K Sbjct: 415 RVNQLAQRMTAAQTLRVDRLRQQLDATDRLRETLSYKATLQRGYAVVHSESG-VVTTKAQ 473 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + I F DG+ + + QG LF Sbjct: 474 ASKHAALTIEFADGELKTV--------PLSGTTPTAKKPSKPPAPDQGSLF 516 >gi|254460102|ref|ZP_05073518.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium HTCC2083] gi|206676691|gb|EDZ41178.1| exodeoxyribonuclease VII, large subunit [Rhodobacteraceae bacterium HTCC2083] Length = 520 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 185/531 (34%), Positives = 283/531 (53%), Gaps = 13/531 (2%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PE++VSE+S +K +E HV +RGE+ G SGH YF +K Sbjct: 1 MSDLIDDPREGANEPEFTVSEISSAVKRTIEGTFDHVRIRGEV-GRVVHARSGHLYFDIK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S + WKG + K+ +PEEG+E + G++TTFPG SKYQ+ ++ + +G G L+ Sbjct: 60 DDRSVLGCTAWKGQVAKLTVMPEEGMEIIATGRLTTFPGQSKYQMNVQDVAVAGEGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRKKKL EG+F + K IPF+P++I V+TSPTGAVIRDIL R+ RFP +V+I+P Sbjct: 120 MLEKRKKKLKAEGIFDPERKQNIPFLPEVIGVVTSPTGAVIRDILHRLRDRFPRKVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG+ C E+ AI N G PRPD+II+ARGGGSIEDLW FN+E++ RA A Sbjct: 180 VAVQGERCAPEVTRAIDGFNAFTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAG 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S+IP+ISA+GHETD TL D+A+D RAPTPT AAE AVPV+ L + L E R + + Sbjct: 240 SAIPLISAVGHETDTTLIDFASDHRAPTPTAAAERAVPVRAELLARLEETEGRRISAMRA 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + ++ L L +ALP + L+ S+ RLD L + L I + ++ Sbjct: 300 ALNHRGEKLRDLSRALPRREALLAHSQQRLDLASARLPNALMARINLGRTGLSQASGALR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L +++ + + + ++ + +++ ++ + + +I Sbjct: 360 PSLLSRSLEASSERVKDRAVRLAPALERKRTTAAIDLQNLSKRFDA--TRVDAQIELRRQ 417 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + ++ R + + + R+ + YK TL RGY ++ + + +T ++ Sbjct: 418 KLSDVLHRFKQAAHAQQDQQTRKLDALDRLRLTLGYKATLDRGYAVVRSADGDVLTTQKA 477 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + I F DG N + P K T + QG LF Sbjct: 478 AKSHVALDIEFADGTLN--IGTGRPAKPAKTATVKT------DPKDQGSLF 520 >gi|254441004|ref|ZP_05054497.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus 307] gi|198251082|gb|EDY75397.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus 307] Length = 515 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 176/530 (33%), Positives = 269/530 (50%), Gaps = 18/530 (3%) Query: 1 MNPFSQKNSL-DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + + + PE++VSELS +K +E HV VR E+ G SGH YF LKD Sbjct: 3 MDLIDEPEAAGNTPEFTVSELSGAVKRTIEGEFGHVRVRAEV-GRVTHARSGHLYFDLKD 61 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + + WKG + + +PEEG+E +V G++TTF SKYQ+ + +G G L+ Sbjct: 62 DRNVLACTTWKGQVADLSVIPEEGMEVVVKGRMTTFGSQSKYQLNATEVAVAGVGALMAM 121 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 L+KRKK L EGLF + K +PF+P +I VITSPTGAVIRDIL R+ RFP +VI++PV Sbjct: 122 LDKRKKALEAEGLFGAERKQALPFLPDVIGVITSPTGAVIRDILHRLRDRFPRKVIVWPV 181 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +C ++A AI N + G PRPD+II+ARGGGSIEDLW FN+E++ RA A S Sbjct: 182 AVQGKDCAPQVARAIDGFNAMTSGGALPRPDLIIVARGGGSIEDLWGFNEEIVARATAAS 241 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHETD TL D+ +D RAPTPT AAEMAVPV+ L ++ + AR + + Sbjct: 242 TIPLISAVGHETDTTLIDFVSDQRAPTPTAAAEMAVPVRLELMVAVDQMGARASRAVTDG 301 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + L + LP +Q ++ R D L +L+ L + ++ Sbjct: 302 VTRRKQRVADLARVLPKPEQLTEDAKQRFDYLSEKLDAALIGRVTEGRLRMGEASGLLRP 361 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L++ + + R+ + + + + + + L Sbjct: 362 SVLVNRLAQGRERMSGLDARLGPALGRKAAQAQRDLDGQARRLRPDVLAVAQ--TRAAKD 419 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ R+ + + + + R+ ++ Y+ TLKRGY ++ + +T + Sbjct: 420 FAVMLRRMTTASRTQTQKQRSRLEALDRMRETLGYRETLKRGYAVVRG-DGAVVTSAKAA 478 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 T + I F DG + QG LF Sbjct: 479 KAATTLDIEFADGTM-------------APAGKPAKLKVKTPPPDQGSLF 515 >gi|192973054|gb|ACF06953.1| exodeoxyribonuclease VII large subunit [uncultured Roseobacter sp.] Length = 517 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 176/531 (33%), Positives = 273/531 (51%), Gaps = 16/531 (3%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PE++VSE+S +K +E+ + V+GE+ G SGH YF +K Sbjct: 1 MSDLIDDPRLGENAPEFTVSEISGAVKRTLEAEFGRIRVKGEV-GRVVQARSGHMYFDVK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D + + WKG ++K+ LPEEG+E +V GK+T+F G SKY + ++ + +G G L+ Sbjct: 60 DERNALACTTWKGQVSKLSVLPEEGMEVVVSGKMTSFGGQSKYNLNVDDVAVAGVGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRK L EGLF K +PF+P +I V+TSPTGAVIRDIL R+ RFP +V+++P Sbjct: 120 MLEKRKTALAAEGLFDPARKQALPFLPDVIGVVTSPTGAVIRDILHRLRDRFPRKVLVWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG C E+A AI N + G PRPD++I+ARGGGSIEDLW FN+E++ RA A Sbjct: 180 VAVQGANCAAEVARAIAGFNAMTPGGALPRPDLLIVARGGGSIEDLWGFNEEIVARAAAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+ +D+RAPTP+ AAE+AVPV+ L + AR + Sbjct: 240 SEIPLISAVGHETDTTLIDFVSDMRAPTPSAAAELAVPVRLDLLAETRAKGARAAQGLAN 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L + +ALP D ++ RLD L L ++ ++ +IK Sbjct: 300 IMARRKQRLADVSRALPRPDSLTQTAQQRLDHWEGRLPLGLRSLVQKQQLRLTASAGQIK 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + + Q + + + + + + + R+ L Sbjct: 360 PSALGRILVQEARQLQALGQRLPAGLDRA--ALSARQMLRACASRLRPAPLAERVARLRK 417 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L TR+E +++ + R+ ++ Y+ TL+RGY ++ IT Sbjct: 418 DLDDLETRLEQTFERQLQRRREQLVACDRLRETLGYRETLRRGYAVVRSGQ-ALITNVAK 476 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG+ + + + QG+LF Sbjct: 477 AEAAKSLEIEFADGRFAV----------GQSTAARPAGRAKPTPPEQGQLF 517 >gi|83950855|ref|ZP_00959588.1| exodeoxyribonuclease VII, large subunit [Roseovarius nubinhibens ISM] gi|83838754|gb|EAP78050.1| exodeoxyribonuclease VII, large subunit [Roseovarius nubinhibens ISM] Length = 519 Score = 398 bits (1023), Expect = e-108, Method: Composition-based stats. Identities = 184/531 (34%), Positives = 273/531 (51%), Gaps = 14/531 (2%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PEY+VSE+S +K +E N V VRGE+ G SGH Y+ +K Sbjct: 1 MSDLIDDPLPGQNMPEYTVSEISGEVKRTLEGNFGRVRVRGEV-GRVFKARSGHLYYDVK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + WKG + + PEEG+E +V G++T F SKY + ++ + +G G L+ Sbjct: 60 DDKNVLACTTWKGQVAGLSVEPEEGLEVVVTGRLTAFGAQSKYNLNVDEVAVAGQGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKR+K L EGLF + K PIP++P+II V+TSP+GAVIRDIL R+ RFP +V+I+P Sbjct: 120 LLEKRRKALAAEGLFDEGRKRPIPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG E+A AI N L G PRPD+II+ARGGGSIEDLW FN+E++VRA A Sbjct: 180 VAVQGQSSAAEVARAIAGFNALTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVVRAAAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVPV+ L + L ARL++ + Sbjct: 240 SEIPLISAVGHETDTTLIDFASDKRAPTPTAAAELAVPVRLDLLAWLDGQSARLSHALSS 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L L +ALP D L R RLD L L + + + ++ Sbjct: 300 GVERRGQRLRDLGRALPRVDSLLDGPRQRLDVWGERLPAALIRSVQMRRVRLSDAAGALR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L ++ Q + + + + + A + + + Sbjct: 360 PAALRGKLRDQGQRLTQTGERLGHALGARTERGRERYDAMSARFGRV--EPHEALQRRRE 417 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + +L R + + +IK + R+ ++ +YK TL+RGY ++ + + I Sbjct: 418 DLTRLSDRFGQVGARQIKDWRDRLDALDRLRETLSYKATLERGYAVVRG-DGDLIKSAAA 476 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG + + + G QG LF Sbjct: 477 AGRAQNLEIEFADG--------VHKVGQPGAPAPKKPAKPQTPPGDQGSLF 519 >gi|99081786|ref|YP_613940.1| exodeoxyribonuclease VII large subunit [Ruegeria sp. TM1040] gi|122397774|sp|Q1GF88|EX7L_SILST RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|99038066|gb|ABF64678.1| Exodeoxyribonuclease VII large subunit [Ruegeria sp. TM1040] Length = 502 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 188/531 (35%), Positives = 272/531 (51%), Gaps = 31/531 (5%) Query: 1 MNPFSQKNS--LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + + PE+SVSE+S +K +E + VRGE+ G SGH Y+ +K Sbjct: 1 MSDLLDDPTPGQNAPEFSVSEISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S + WKG ++ + +PEEG+E +V G++T F G SKY + ++ + +G G L+ Sbjct: 60 DDRSVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRK +L EGLF+ + K P+P++P II VITSP+GAVIRDIL R+ RFP +V+++P Sbjct: 120 LLEKRKAQLAAEGLFAPERKKPLPYLPGIIGVITSPSGAVIRDILHRLRDRFPRKVLVWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG E+A AI N L G PRPD+II+ARGGGSIEDLW FN+E++ RA A Sbjct: 180 VAVQGSNSAPEVARAIDGFNALTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARATAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL DY +DLRAPTPT AAE AVPV+ L + N AR+ N R Sbjct: 240 SDIPLISAVGHETDTTLIDYVSDLRAPTPTAAAEHAVPVRLELLGWVENQGARMANAASR 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L + +ALP D L R RLDR+ L + L + R+ + ++ Sbjct: 300 AVQLRRQRLGDMARALPRPDTLLETPRQRLDRVSDRLPNALISGVQRRKLTLSDRAASLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + + + Sbjct: 360 PATLRGLVSSRQDKLKNLSSRLT------------------------LRPITQDLGRKRD 395 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + ++ R+ S +I +S T R L +YK TL+RGY ++D +T Sbjct: 396 ALDRITKRLNTAQSSRIDRQIDRLSATARQLDILSYKATLRRGYAVVRDGA-ALVTSTEG 454 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG + AP + + + G QG LF Sbjct: 455 ARKAAELSIEFADGTFDV---ASAPSTTKKSAPKPAAPKAPKTPGEQGSLF 502 >gi|167645191|ref|YP_001682854.1| exodeoxyribonuclease VII large subunit [Caulobacter sp. K31] gi|189037852|sp|B0SY33|EX7L_CAUSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|167347621|gb|ABZ70356.1| exodeoxyribonuclease VII, large subunit [Caulobacter sp. K31] Length = 528 Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 184/526 (34%), Positives = 278/526 (52%), Gaps = 7/526 (1%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + P YSVSEL++ LK +E++ + V +RGE+S H +GH Y ++KD+ S ID + Sbjct: 6 PDSNAPAYSVSELAFALKRTLETSYAFVRLRGELSKVTH-HGNGHVYLTIKDDKSAIDGV 64 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +WKG + + PE G+E +V GKITT+P S+YQI+IE++ +G G LL LE+ K KL Sbjct: 65 VWKGNVRGLGIRPEHGLEVIVTGKITTYPAGSRYQIVIETMEAAGVGALLAQLERLKAKL 124 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECP 187 EGLF+ K P+P +P ++ VITSPTGAVIRDIL RI R+P +V+++P VQGD Sbjct: 125 NAEGLFAPDRKRPLPSMPAVVGVITSPTGAVIRDILHRIRDRWPCQVLVWPCVVQGDAAA 184 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +++ AI N L G PRPDI+I+ARGGGS+EDLW FNDE + R +A +IP+ISA+ Sbjct: 185 GQVSAAIRGFNALTPGGPVPRPDILIVARGGGSVEDLWAFNDEGLARTVAEGTIPLISAV 244 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TL D+ +D RAPTPT AAEMA PV L++ + + + RLNN R ++ + L Sbjct: 245 GHETDTTLIDFVSDRRAPTPTAAAEMATPVLAELRALVSDYDRRLNNCGGRAVEERRTRL 304 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 S + LP L+ ++ RLD L L+ + R F R+ L N Sbjct: 305 TSAARGLPRPADLLALAQQRLD-LAVRGLPRLDDLTAPAERRFKEAAARLD-TALQRNTD 362 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + +L+ + R + + L + H + L R+ Sbjct: 363 IHARDLLKVTARLSPDTLHRQRADAGRRVGDLGRRLDLAARRVPERVAQHARLPALQDRL 422 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + +++ ++ ++ QS L+ G+ + + LA+ R+ + Sbjct: 423 NAVARRRLERETDRLAGLEKLRQSLNPTRPLELGFALVHKADGGIARSASELASGERVRL 482 Query: 488 NFFDGQANAIVINKA----PPKEQPTKKCQLHNNKREKQGTQGELF 529 F G +A++ ++ PP P K QG LF Sbjct: 483 QFRQGDRDAVIDGESSGVLPPSAAPAPTRPTPRPKPASSSDQGSLF 528 >gi|154251076|ref|YP_001411900.1| exodeoxyribonuclease VII large subunit [Parvibaculum lavamentivorans DS-1] gi|171769562|sp|A7HQR0|EX7L_PARL1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|154155026|gb|ABS62243.1| exodeoxyribonuclease VII, large subunit [Parvibaculum lavamentivorans DS-1] Length = 477 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 205/530 (38%), Positives = 288/530 (54%), Gaps = 56/530 (10%) Query: 1 MNPFSQKNSL--DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M P ++ + E+SVSE+S+ LK VE HV VRGEI+GYRG HSSGH YF LK Sbjct: 1 MPPSDTQSPAANNAHEFSVSEISFALKKTVEETFGHVRVRGEITGYRGPHSSGHCYFGLK 60 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ +R+DA+IWKG K+ F PEEG+E + GK+TT+PGSSKYQI+I+ L P+G G L+ Sbjct: 61 DDKARMDAVIWKGNFGKLRFKPEEGMEVIATGKLTTYPGSSKYQIVIDHLEPAGVGALMA 120 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LE+R+KKL EGLF+ + K +PF+P++I V+TSPTGAVIRDIL R+ RFP VI++P Sbjct: 121 LLEERRKKLAAEGLFAAERKRALPFLPEVIGVVTSPTGAVIRDILHRLQDRFPRHVIVWP 180 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V+VQG+ E+A AI N +++G PRPD++I+ARGGGSIEDLW FN+E++VRA A Sbjct: 181 VRVQGETSAAEVAAAIRGFNAMEKGGKTPRPDLLIIARGGGSIEDLWSFNEEIVVRAAAE 240 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S+IP+ISAIGHETD TL D+A+D RAPTPT AAEMAVPV+ L + + + +RL R Sbjct: 241 SAIPLISAIGHETDTTLIDFASDRRAPTPTAAAEMAVPVRAELLADVRDKGSRLIRCEAR 300 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ L L + LP ++ R R D L L K + + R+ Sbjct: 301 AIESYRTQLGGLARGLPKLQDLVALPRQRFDTAADRLGRALIRAAEVKRARLSRVEGRLS 360 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + I R+ + + Q + + Sbjct: 361 DRPIRLRIANERKGLPQLLQRLTRAET--------------------------------- 387 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 ++ S+ +T++L+S++Y LKRGY ++D I Sbjct: 388 --------------RRVADLARSLDGSTKLLESYSYHGVLKRGYAVVRDETGKPIRAGAG 433 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 RI I F + + +A+V ++ G QG L Sbjct: 434 QTAGARIEIEFAEDRLDAVV-------APGGTVAPRKAPPKKPGGGQGSL 476 >gi|83591499|ref|YP_425251.1| exodeoxyribonuclease VII large subunit [Rhodospirillum rubrum ATCC 11170] gi|83574413|gb|ABC20964.1| Exodeoxyribonuclease VII large subunit [Rhodospirillum rubrum ATCC 11170] Length = 537 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 203/538 (37%), Positives = 290/538 (53%), Gaps = 15/538 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + PE SVSELS LK +E S V VRGEIS + SGH Y LKD+ Sbjct: 1 MIDTPNAPVHNLPELSVSELSGALKRTIEEAFSRVRVRGEISQPKV-AGSGHCYLRLKDD 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + IDAIIW+GT+ K+ PEEG+E + IG++TT+PG S YQI+IESL +G G LL L Sbjct: 60 QAVIDAIIWRGTMAKLALRPEEGLEVIAIGRLTTYPGRSSYQIVIESLELAGEGALLKML 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+R+++L EGLF K PF+P +I VITSPTGAVIRDIL R++ RFP V+++PV Sbjct: 120 EERRRRLAAEGLFDAGRKRRPPFLPSVIGVITSPTGAVIRDILHRLADRFPRPVLVWPVA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +IA AI N L G PRPD++I+ARGGGS+EDL FNDE +VRA + S+ Sbjct: 180 VQGEGAAAQIAAAITGFNALPAGGPVPRPDVLIVARGGGSLEDLMAFNDEAVVRAASASA 239 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+AADLRAPTPTGAAEMAVPV+ L + + RL+ +RLI Sbjct: 240 IPLISAVGHETDTTLIDHAADLRAPTPTGAAEMAVPVRLDLLAQVRERGGRLDGATLRLI 299 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + L + LP+ + + RLD LE L ++ R+ H R++ Sbjct: 300 EERRLRIEGLGRGLPDLARLIGTFAQRLDDRAERLEAALPRLLDRRADGVFHTAARLRG- 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I + + + +E + + LR ++ L Q + + Sbjct: 359 -PGEMIARKADALERAGRGLETGLARGLREAASRLDQRADRL--RPGQIARLVAEGSRAL 415 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R++ + + ++ L + +Y+ L+RGY ++D + R L Sbjct: 416 TTLAGRLDDLGRQTLVRRQDTLEGLGARLDNMSYRKVLERGYAVVRDATGAIVPAARGLT 475 Query: 481 TKTRILINFFDGQANAIVIN-------KAPPKEQPTKKCQLHNNKREKQGT---QGEL 528 ++++F DG+ A + P E P +R + QG+L Sbjct: 476 KGDGVVLDFRDGRVAATIGEADPEAIPGQPAPETPPTAAGRSPARRPRSAGEGRQGDL 533 >gi|304320146|ref|YP_003853789.1| Exonuclease VII, large subunit [Parvularcula bermudensis HTCC2503] gi|303299049|gb|ADM08648.1| Exonuclease VII, large subunit [Parvularcula bermudensis HTCC2503] Length = 550 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 177/526 (33%), Positives = 273/526 (51%), Gaps = 10/526 (1%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + S + EYSVSELS +K +E +V VRGE+ G +GH Y LKD + + Sbjct: 7 ADGGSGNLKEYSVSELSGAVKRTIEDGFGYVRVRGEL-GRVSRSGNGHCYLDLKDERAVL 65 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 ++IWKG ++++ PE+G+E + G++TTF G S+YQ++I++L P+G+G L+ E RK Sbjct: 66 SSVIWKGGWSRLKVKPEQGMEVIATGRMTTFAGQSRYQLVIDTLEPAGAGALMALFEARK 125 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 K L EGLF+ + K P+P +P++I V+TSPTGAVIRDIL R+ RFP+ V+++P VQG+ Sbjct: 126 KALEAEGLFAAERKRPLPPMPQVIGVVTSPTGAVIRDILHRLRDRFPVHVLVWPAVVQGE 185 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +CPK + + N L PRPD++I+ARGGGS+EDLW FNDE + RA+A SSIP+I Sbjct: 186 QCPKSVVAGVEGFNALPTDGPVPRPDVLIVARGGGSLEDLWGFNDEAVARAVAASSIPVI 245 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHETD TL DY AD RAPTPT AAEMAVPV+ L L L RL I ++ + Sbjct: 246 SAIGHETDVTLIDYVADRRAPTPTAAAEMAVPVRMDLSGRLDALNVRLTQRIGHHLEAQS 305 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L S + L + + + R DR L +L++ + R + + + + Sbjct: 306 LALQSAARGLGRKESLIEPAEQRFDRAVSHLTQSLKVRVERATQRMERAAGGLSAALVTA 365 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + + Q + + + K+ + + + +KK+ Sbjct: 366 AVAMKAETLKGMSQRLITAPPRRWEQA----RSKVISARLSPHLVRRSLDRGGEEVKKIG 421 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ + + + R+L S +Y+ L RG+ + D + I R + Sbjct: 422 GRLGRLTRENVDRKSARLDDQARLLHSLSYQGVLARGFALVLDESQGVIRSPRQMRAGET 481 Query: 485 ILINFFDGQANAIV-----INKAPPKEQPTKKCQLHNNKREKQGTQ 525 + F +G+ +K R+ G+Q Sbjct: 482 YHLRFAEGEVPVRHLIEGETKGPAAASSAARKTPQAKTSRKSDGSQ 527 >gi|146276686|ref|YP_001166845.1| exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides ATCC 17025] gi|166232360|sp|A4WQ76|EX7L_RHOS5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|145554927|gb|ABP69540.1| Exodeoxyribonuclease VII large subunit [Rhodobacter sphaeroides ATCC 17025] Length = 519 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 192/534 (35%), Positives = 279/534 (52%), Gaps = 22/534 (4%) Query: 1 MNPF--SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + + PEY+VSELS +K ++E V VRGEI G +SGH YF LK Sbjct: 1 MSDLFEDPAPARNTPEYTVSELSGAVKRVIEGEFGLVRVRGEI-GRVSRPASGHLYFDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + I AI WKG ++ PEEG+E + G++TTFPG SKYQII+E + P+G+G L+ Sbjct: 60 DDRAVIAAICWKGQAGRLSVRPEEGMEVVATGRMTTFPGQSKYQIIVEDMAPAGAGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKR+ L EGLF K P+PF+P++I V+TSP+GAVIRDIL R+ RFP V+I+P Sbjct: 120 MLEKRRAALAAEGLFDAARKRPLPFLPRVIGVVTSPSGAVIRDILHRLRDRFPSHVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG++C E+A AI N L +G PRPD++I+ARGGGS+EDLW FN+E++VRA A Sbjct: 180 VAVQGEKCAPEVAAAIRGFNALPDGGPIPRPDLLIVARGGGSLEDLWGFNEEIVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L ARL+ Sbjct: 240 SRIPLISAVGHETDTTLIDHAADRRAPTPTAAAEMAVPVRLDLLAGLDGQGARLSRCAAE 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L L +ALP D ++ R D L L + + + ++ Sbjct: 300 TIRRRDQRLRDLSRALPRLDSLVAGPSQRFDLWSARLSGALGQSVAARRARLEPLGAHLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIV---KQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 L + + + + ++ + +E + + R F ++A R Sbjct: 360 PRLLADLVARQKDRLADRGRGLETCLGRRSERARDRFEALSGRLAPAFARLVAESERTNR 419 Query: 416 LHTHIKKLITRIEFIL-SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + ++ + R+ Q+ Y+ TL+RGY ++ + +T Sbjct: 420 RDAAALGALAARLEAAPEARLLRLADRLEALDRLRQTLGYRETLRRGYAVVR-ADGEVVT 478 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 K + I F DG+ + + + QG L Sbjct: 479 TKTAAERAASLEIEFQDGRLTL--------------GARKPRKGKAEPPAQGSL 518 >gi|254293365|ref|YP_003059388.1| exodeoxyribonuclease VII large subunit [Hirschia baltica ATCC 49814] gi|254041896|gb|ACT58691.1| exodeoxyribonuclease VII, large subunit [Hirschia baltica ATCC 49814] Length = 559 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 185/537 (34%), Positives = 278/537 (51%), Gaps = 20/537 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + PE SVSELS LK VE S+V VRGE+ G + SGH Y LKD+ + ++ I+W Sbjct: 26 SNSPEMSVSELSNRLKRTVEDAYSYVRVRGEL-GRVTLAKSGHLYVDLKDDKAVLNTIMW 84 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++K+ F PEEG+E + G+++T+PG S YQ+I ES+ P+G G L+ LE+RKKKL Sbjct: 85 KGQVSKLPFKPEEGLEVIAEGRLSTYPGRSNYQMIAESMRPAGVGALMQLLEERKKKLAA 144 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189 EGLF+ +HK +PF+P+ I V+TSPTGAVIRDIL R+ RFP V+I+P VQG+ + Sbjct: 145 EGLFNPEHKKELPFLPETIGVVTSPTGAVIRDILHRVKERFPTHVLIWPALVQGEHAAAQ 204 Query: 190 IANAILQLNTLKE-GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +A I N + R RPD+II+ARGGGS+EDLW FNDE +VRA+ S IPIISA+G Sbjct: 205 VAGGIRGFNAIGPAARKIKRPDLIIVARGGGSVEDLWPFNDEDVVRAVFESEIPIISAVG 264 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TL D+ +D RAPTPTGAAE+A+PV+ L ++ L AR + R + L Sbjct: 265 HETDTTLIDFVSDRRAPTPTGAAEIALPVRAELIATTDALGARGKRALQRGVDTSKVELR 324 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +P + + R RLD +L L+ I+ R + ++ L + + Sbjct: 325 AVTARMPRPEMLVQGVRQRLDYASEKLGFALKDIVVRMRSRLQQASSGLQPLALQREMVR 384 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + +++ L +N ++ R Sbjct: 385 RKTALDTLYMRASFALRRDAGDRSKLLHGIYGRF--LARDPRNTFGRKQDLVEATFHRST 442 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + I + ++ R+L S +++N L RG+ +Q N + ++ + R+ + Sbjct: 443 VAMERLIGKKYENLETVNRLLSSVSHENVLARGFVLVQRMNGELVRHASDVDSSERLRLQ 502 Query: 489 FFDGQANAIVINKAPPKEQP----------------TKKCQLHNNKREKQGTQGELF 529 F D + K P + + + G QG+LF Sbjct: 503 FIDDEVRVTSDPKTPQEAPRIVRETEPQTTQLGGIASAPTKKIVKPPSGSGGQGDLF 559 >gi|259415863|ref|ZP_05739783.1| exodeoxyribonuclease VII, large subunit [Silicibacter sp. TrichCH4B] gi|259347302|gb|EEW59079.1| exodeoxyribonuclease VII, large subunit [Silicibacter sp. TrichCH4B] Length = 502 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 189/531 (35%), Positives = 277/531 (52%), Gaps = 31/531 (5%) Query: 1 MNPFSQKNS--LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ S + PE+SVSE+S +K +E + V VRGE+ G SGH Y+ +K Sbjct: 1 MSDLLDDPSPGQNAPEFSVSEISGEIKKTLEGSFGRVRVRGEV-GRVFKARSGHLYYDIK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S + WKG ++ + +PEEG+E +V G++T F G SKY + ++ + +G G L+ Sbjct: 60 DDRSVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGGQSKYNMNVDEVAVAGQGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRK +L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+++P Sbjct: 120 LLEKRKAQLASEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG C E+A AI N L G PRPD+II+ARGGGSIEDLW FN+E++ RA+A Sbjct: 180 VAVQGSNCAPEVARAIEGFNNLSPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAVAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL DY +DLRAPTPT AAE AVPV+ L + N AR+ N R Sbjct: 240 SQIPLISAVGHETDTTLIDYVSDLRAPTPTAAAEHAVPVRLELLGWVENQSARMANATSR 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L + +ALP D L R RLDR+ L + L + R+ + ++ Sbjct: 300 AVQLRRQRLGDVARALPRPDTLLETPRQRLDRVSDRLPNALIAGVQRRKLTLSERAATLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L ++ + + + + Sbjct: 360 PATLRSLVEARKDRLKNLSSRLT------------------------LRPIQQDTARKRD 395 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + ++ R+ + +I+ +S T R L+ +YK TL RGY ++D + +T Sbjct: 396 ALDRISKRLNAAQTSRIERHADRLSATARQLEILSYKATLSRGYAVVRDGD-ALVTNTLG 454 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG I + T + G QG LF Sbjct: 455 ARNAAALSIEFADGTVE---IGANAATPKKTAPKPAAPKPPKTPGEQGSLF 502 >gi|237732486|ref|ZP_04562967.1| exodeoxyribonuclease VII large subunit [Citrobacter sp. 30_2] gi|226908025|gb|EEH93943.1| exodeoxyribonuclease VII large subunit [Citrobacter sp. 30_2] Length = 457 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 236/495 (47%), Gaps = 53/495 (10%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+ +++ Sbjct: 3 SSQTTSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQFKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ Sbjct: 236 VGHETDVTIADFIADLRAPTPSAAAEIVS------------------------------- 264 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 N + L ++ RL ++ I + R F + +R++ + Sbjct: 265 --------RNQLELLRQIQHGQQRLEM----AMDYYIANRTRRFTQLHHRLQQQHPQLRL 312 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + +Q + ++ ++ ++ L ++ + RI+ T I++L R Sbjct: 313 ARQQTVLERLRQRMNFALENKIKQANQRQQRVSQRLS--QQNPQPRIYRAQTRIQQLEYR 370 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ + L++ + +TL RGY+ T+ + Q + + T + Sbjct: 371 LAENIRARLSAQRERFGNVVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQVKTGDVLT 430 Query: 487 INFFDGQANAIVINK 501 DG + V Sbjct: 431 TRLSDGWVESEVKGI 445 >gi|90419936|ref|ZP_01227845.1| exodeoxyribonuclease VII, large subunit [Aurantimonas manganoxydans SI85-9A1] gi|90335977|gb|EAS49725.1| exodeoxyribonuclease VII, large subunit [Aurantimonas manganoxydans SI85-9A1] Length = 545 Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats. Identities = 212/547 (38%), Positives = 307/547 (56%), Gaps = 20/547 (3%) Query: 1 MNPFSQKNSL-DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + + + EYSVSE+S LK VE HV +RGE+SGYRG HSSGHAYFSLKD Sbjct: 1 MSRSPESAPMSNVAEYSVSEISGALKRTVEERFGHVRLRGEVSGYRGPHSSGHAYFSLKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +RIDA+IW+ +K+ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ Sbjct: 61 DRARIDAVIWRTAFSKLAFKPEEGLEVVATGKLTTYPGSSKYQIVIEQIEPAGAGALMAL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 L +R++KL EGLF+ + K P+PF+P++I V+TSPTGAVIRDI RI+ RFP+ ++++PV Sbjct: 121 LNERRRKLEAEGLFAAERKRPLPFMPRVIGVVTSPTGAVIRDIHHRIADRFPVHLLVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A AI NT E RPD+II+ARGGGS+EDLW FNDE++VRA A S Sbjct: 181 RVQGETSGEEVARAIDGFNTFPESGAIARPDLIIVARGGGSLEDLWGFNDEVVVRAAAAS 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHETDWTL D+AAD+RAPTPTGAAEMAVPV+ L +++ L AR + + R Sbjct: 241 AIPLISAVGHETDWTLIDHAADMRAPTPTGAAEMAVPVRADLLAAVAALAARHSGAVSRR 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + + +ALP+ D L+ R RLD L L + + K R + + R+ Sbjct: 301 LDQERRAVAATARALPSPDMLLALPRRRLDEASTSLGQCLRVNLSEKRRAYGEVATRLAP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L +++ R + Q H V ++ + A L + R Sbjct: 361 SSLETLLREKRADLRHHQSHAAHAVTGLVQRKRQRFERIAADLQP--HRINARAEAARLR 418 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + L R+ + +++ R+ S L+RGYT ++ + I + L Sbjct: 419 LGTLGERLTAAQALAATGRRQALASAWRVADSLNPMRVLERGYTIVRGPDGEPIVRASGL 478 Query: 480 ATKTRILINFFDGQANAIVINKAP-----------------PKEQPTKKCQLHNNKREKQ 522 + F Q V P E P + + + + Sbjct: 479 EPGMAFEVQFAHDQRRGAVATGEPVAGITPAAAGDAAAEPAETEPPKPRAKRRAAAKATE 538 Query: 523 GTQGELF 529 QG LF Sbjct: 539 EDQGTLF 545 >gi|240949395|ref|ZP_04753736.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor NM305] gi|240296144|gb|EER46800.1| exodeoxyribonuclease VII large subunit [Actinobacillus minor NM305] Length = 486 Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats. Identities = 138/492 (28%), Positives = 251/492 (51%), Gaps = 12/492 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + +V++L+Y ++H++E+ L + + GEIS + SGH Y +LKD ++++ ++K Sbjct: 2 NNILTVTQLNYSVRHLLETELGQIWLTGEISNF-SQPVSGHWYLTLKDENAQVRCAMFKM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 +++ F P+ G++ LV ++ + YQ+IIES+ P+G G L E+ K KL +G Sbjct: 61 KNSRVTFYPQNGMQVLVRASVSLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKMKLAAQG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ +HK +P K + +ITS +GA ++DIL + R P L V+I+P VQG E ++I Sbjct: 121 LFAQEHKKALPDFVKRVGIITSSSGAALQDILNILKRRDPSLAVVIYPTLVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 181 VQTIDLANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAYAIYRSEIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +N R+ K+ L Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELIRQLQHHFNMVNLAFDRIWHEKLTRFQQL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + L + R ++L +E +++ ++ + + R++ + Sbjct: 295 NLRLNAQHPSKYLHVFKIRFEQLAYRMEKSVKSLLSARRNQLTQVFLRLQPHHPQRKLAM 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + +++ + Q + Q+L + + + +I +I +L ++ Sbjct: 355 QCEQLAQREVRLHQQMSQYLSRKKQDWENLTKRIES--TSLPYQIEKKQQYITRLAQQLS 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + + + S L + L RGY+ Q + + +T + +A +++ Sbjct: 413 YAMDKRYLKEYQSFQALCTRLDGLSPLKILGRGYSITQTSKGHILTNAKEVAVGDKLITQ 472 Query: 489 FFDGQANAIVIN 500 GQ + V+ Sbjct: 473 LETGQIISEVME 484 >gi|56696229|ref|YP_166586.1| exodeoxyribonuclease VII large subunit [Ruegeria pomeroyi DSS-3] gi|81820092|sp|Q5LTR9|EX7L_SILPO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|56677966|gb|AAV94632.1| exodeoxyribonuclease VII, large subunit [Ruegeria pomeroyi DSS-3] Length = 482 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 181/517 (35%), Positives = 266/517 (51%), Gaps = 36/517 (6%) Query: 13 PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 PE++V+E+S +K +E + + VRGE+ G SGH Y+ +KD+ + + WKG Sbjct: 2 PEFTVTEISGEVKRTLEGSFGRIRVRGEV-GRVFQARSGHLYYDIKDDRNVLACTTWKGQ 60 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + + +PEEG+E +V G++T F SKY + ++ + +G G L+ LEKRKK+L EGL Sbjct: 61 VASLSVVPEEGLEVVVTGRLTAFGAQSKYNLNVDEVAVAGQGALMALLEKRKKQLEAEGL 120 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192 F+ + K P+P++P+II VITSP GAVIRDIL R+ RFP +V+I+PV VQG C E+A Sbjct: 121 FAPERKRPLPYLPQIIGVITSPQGAVIRDILHRLRDRFPRKVLIWPVAVQGANCAPEVAR 180 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N G PRPD++I+ARGGGSIEDLW FN+E++ RA A S IP+ISA+GHETD Sbjct: 181 AIEGFNMFSPGGALPRPDLLIVARGGGSIEDLWGFNEEIVARAAAASQIPLISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL D+ +D RAPTPT AAEMAVPV+ L + ARL+ ++ + L L + Sbjct: 241 TTLIDFVSDRRAPTPTAAAEMAVPVRLELLAWTGEQGARLSRAASDAVQRRAQRLRDLSR 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 ALP D L R RLDR L L + R+ + ++ L + R H Sbjct: 301 ALPRPDSLLDTPRQRLDRAAERLPAALTQGVQRRRLRLAELSAPLRPASLRALVSARRDH 360 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + I + +L R+ + Sbjct: 361 LAHLGSRLS------------------------PRALEREIAAQGERLTRLSDRLNSAQT 396 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 +I+ + R+ ++ YK TL RGY ++D +T + A + I F DG Sbjct: 397 TRIERLRQRLESADRLRETLGYKATLARGYAVVRDDQGALLTTRAQAAKAAALQIEFADG 456 Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + + ++K QG LF Sbjct: 457 TLD-----------TGGAPAKPASKPKQKPPEQGSLF 482 >gi|146312641|ref|YP_001177715.1| exodeoxyribonuclease VII large subunit [Enterobacter sp. 638] gi|166919633|sp|A4WD84|EX7L_ENT38 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|145319517|gb|ABP61664.1| exodeoxyribonuclease VII, large subunit [Enterobacter sp. 638] Length = 457 Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats. Identities = 148/508 (29%), Positives = 234/508 (46%), Gaps = 57/508 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S Y+VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 SSQSPSIYTVSRLNQSVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 SAEGLFDQQFKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARHE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ +D+RAPTP+ AAE+ ++ L + N + RL + + + Sbjct: 236 VGHETDVTIADFVSDMRAPTPSAAAEVVSRNQQELLRQMQNGQQRLEMAMDYFLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L R + +RL + + L+ + R H + R+ Sbjct: 296 FTQLHHRLQQQHPQLRLERQQTVLERLRQRMNFALDNQLKRVVSHQQRMTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIYRTQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ + Q + + Sbjct: 374 -----NLRARLSTTRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQVKAGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512 + DG + V P K+ KK Sbjct: 429 MTTRLADGWVESEVKGITPAKKTRKKKP 456 >gi|126733161|ref|ZP_01748908.1| Exonuclease VII, large subunit [Roseobacter sp. CCS2] gi|126716027|gb|EBA12891.1| Exonuclease VII, large subunit [Roseobacter sp. CCS2] Length = 495 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 182/495 (36%), Positives = 277/495 (55%), Gaps = 6/495 (1%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + F + + + PE+SVSE+S +K +E SHV V+GEI G +SGH Y LKD+ Sbjct: 3 DLFEDEPADNTPEFSVSEISGAVKKAIEGGFSHVRVKGEI-GRVSRPASGHIYMDLKDDR 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + +IWKG + PEEG+E + GK+TTFPG SKYQ++IE + P+G+G L+ LE Sbjct: 62 AVLAGVIWKGRAQGLAHRPEEGMEVVATGKLTTFPGQSKYQMVIEDIAPAGAGALMAMLE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 KRK L EG F+ + K +P++P+II V+TSP+GAVIRDIL R+ RFP +V+++PV V Sbjct: 122 KRKAALAAEGFFAPERKKELPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVAV 181 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +C E+A AI NTL G PRPD++I+ARGGGS+EDLW FN+E++ RA A S I Sbjct: 182 QGQKCAPEVAAAIEGFNTLTPGGALPRPDLLIVARGGGSLEDLWGFNEEVVARAAAASDI 241 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETD TL D+ +D+RAPTPT AAE+AVPV+ L + ARL+ + + Sbjct: 242 PLISAVGHETDTTLIDFVSDMRAPTPTAAAELAVPVRMELLAWADQQGARLSRALTTGLT 301 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + + L +ALP D + R RLD L L L + + ++ Sbjct: 302 QRQQRVRDLGRALPQVDALVEGPRQRLDYLGERLPAALTGAAAK--KRLQMSEAALRPGI 359 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + ++R+ + + +K+ R ++ + ++R+ + Sbjct: 360 LSRRLAEDRRRLDGLSDRLGPALKRRSREARTTLEQ--TSRGLRAGVLQDRVSRQSDRLI 417 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + R+ S + + + R+ ++ Y TLKRGY ++ + +T K Sbjct: 418 GTLRRLSDRASRQQAERLSKLEALDRLRETLGYVETLKRGYAVVRG-DGAVVTTKGAAQK 476 Query: 482 KTRILINFFDGQANA 496 + I F DG+ + Sbjct: 477 AKALEIEFADGRLHV 491 >gi|163797950|ref|ZP_02191892.1| Exodeoxyribonuclease VII [alpha proteobacterium BAL199] gi|159176744|gb|EDP61315.1| Exodeoxyribonuclease VII [alpha proteobacterium BAL199] Length = 494 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 181/529 (34%), Positives = 272/529 (51%), Gaps = 41/529 (7%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +P + + PE++V E+S +K VES V VRGEIS SGH Y SLKD+ Sbjct: 6 SPTAPAPG-NLPEFTVGEVSLAVKRTVESAFERVRVRGEIS-RPTRAGSGHLYLSLKDDQ 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + ++A+ W+G ++ PEEG E + GK+TT+PG SKYQ++IE + +G G LL LE Sbjct: 64 AVLEAVCWRGQAQRLSIQPEEGTEVIATGKLTTYPGRSKYQMVIEQMELAGEGALLKLLE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 R+K+L EGLF + K PIPF+P +I V+TSPTGAVIRDIL R++ RFP+ VI++PV V Sbjct: 124 DRRKRLTAEGLFEVERKRPIPFLPSVIGVVTSPTGAVIRDILHRLADRFPVHVIVWPVLV 183 Query: 182 QGDECPKEIANAILQLNTLKE-GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 QG+ ++IANAI N L G RPD++I+ARGGGS+EDLW FN+E++VRA A S Sbjct: 184 QGEGAKEQIANAIAGFNALPATGGKVARPDLLIVARGGGSLEDLWAFNEEIVVRAAAASD 243 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+D RAPTPT AAEMAVPV+ L + + AR+ + + R + Sbjct: 244 IPLISAVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRADLVARIAENAARIAHAVARRL 303 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L L + L + + ++ RLD + +L + R Sbjct: 304 TDGTTRLTGLARGLGDPAARIEQAQQRLDYAGQTAGASLTRTLERLADRVER-------- 355 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ E + A+ + + R+ Sbjct: 356 ---------------------RLPTPFEILARTEGRLNAALRGLRIAPVEQRLDQTSREF 394 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +L + + +K + R+L++ ++ L RG+ ++D + +T + Sbjct: 395 IRLAKASDSAVDRFLKVESDRLKALERVLEANSFVRVLDRGFALVRDADGTPVTSADDAR 454 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG+ A+V + + TQ LF Sbjct: 455 DGQAVTLRFRDGERAAVV---------GAGGTRSRSKTPVAPPTQETLF 494 >gi|315500485|ref|YP_004089288.1| exodeoxyribonuclease vii, large subunit [Asticcacaulis excentricus CB 48] gi|315418497|gb|ADU15137.1| exodeoxyribonuclease VII, large subunit [Asticcacaulis excentricus CB 48] Length = 547 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 183/551 (33%), Positives = 272/551 (49%), Gaps = 35/551 (6%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + P +SVSEL+ LK +ES HV +RGEIS H+SGH Y +LKD+ + Sbjct: 7 SPVDSQSNSPPWSVSELAGALKRTIESAYDHVRLRGEISKVT-RHTSGHVYLTLKDDRAA 65 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID +IWKG +++++ P+ G+E +V GK+TTFP SSKYQI+IESL +G G LL LE+ Sbjct: 66 IDGVIWKGNISRLKAQPQAGLEVIVTGKLTTFPASSKYQIVIESLEAAGIGALLAQLERT 125 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K KL EGLF+ + K +PF PK I VITSPTGAVIRDIL RI R+P RVI++PV VQG Sbjct: 126 KAKLHGEGLFAAERKKRLPFAPKTIGVITSPTGAVIRDILHRIRDRWPCRVIVWPVIVQG 185 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D P +I A+ + PRPD++I+ARGGGS+EDLW FNDE + RA+A ++P+ Sbjct: 186 DAAPAQIIQALNGF----QSGAVPRPDVLIVARGGGSVEDLWAFNDEGLARAVAACTLPV 241 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL D+ +D RAPTPTGAAEMA PV L+ +++LE R + ++ + Sbjct: 242 ISAVGHETDTTLIDFVSDRRAPTPTGAAEMATPVLSELRGFVLDLERRRLGSFDQALRNR 301 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L +ALP + ++ RLD L L + F R L Sbjct: 302 RERVALLGRALPKPQDLIDAAQQRLDYAAHRLGGGLLRNLNAHDTAFARTAARFSPALLE 361 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + + + + +E A L T + + +L Sbjct: 362 RPRHLKAERVTQLSERATAALTRGVERQRVEFTRLSARLTPAL--TLRPLDLKREALNRL 419 Query: 424 ITRIEFILSHKIK------------------------SCHTSVSITTRILQSFAYKNTLK 459 R + L+ ++ + ++ S L Sbjct: 420 NQRFDAALNRRLDDSARRARLPELEQRLAAALARLLSQKSERLHRLDQLRLSLDPDRPLN 479 Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFF-DGQANAIVINKAPPKEQPTKKCQLHNNK 518 G+ + + + +T + + + F D + + + P + Sbjct: 480 LGFARVSRADGHLVTSPEGVGVGEALTLTFKGDRTLDVVASDGT---SAPPTRPATKPRP 536 Query: 519 REKQGTQGELF 529 + QG LF Sbjct: 537 TPLKPEQGSLF 547 >gi|307296250|ref|ZP_07576077.1| exodeoxyribonuclease VII, large subunit [Sphingobium chlorophenolicum L-1] gi|306878052|gb|EFN09275.1| exodeoxyribonuclease VII, large subunit [Sphingobium chlorophenolicum L-1] Length = 499 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 182/531 (34%), Positives = 269/531 (50%), Gaps = 55/531 (10%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 +++ + P SVSELS LK VE HV +RGEISG++ SGH Y LKD+++ Sbjct: 17 AEERSGDNAPPLSVSELSALLKRTVEDRFGHVRLRGEISGFK-RAGSGHIYLCLKDDNAV 75 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID ++WKG ++ F P++G+E + GK+TT+PG SKYQI+I+ + +G G L+ LEK Sbjct: 76 IDGVMWKGGAARLPFAPQDGVEVIATGKLTTYPGRSKYQIVIDRMELAGEGALMALLEKL 135 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF K +PF+P++I V+TSPTGAVIRDIL R+ R P +V+++PV VQG Sbjct: 136 KQKLAAEGLFDRSAKRRLPFMPRVIGVVTSPTGAVIRDILHRLEDRCPTQVLLWPVLVQG 195 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++IA A+ + ++ G PRPD++I+ARGGGSIEDLW FN+E++VRA+A SIPI Sbjct: 196 QGAAEQIARAVRGFSAMQPGGPIPRPDLVIVARGGGSIEDLWSFNEEIVVRAVAECSIPI 255 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL DYAAD+RAPTPT AAEMAVPV+ L + L R++ + R Sbjct: 256 ISAVGHETDTTLCDYAADMRAPTPTAAAEMAVPVRAELLAMLTEQGLRMDRAVRRGAAQA 315 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + +P D L+ R RLD+L L L I H ++ L Sbjct: 316 RERLEMQARLMPTPDTLLAPQRQRLDQLSDGLGSALRHRIADARTHLGQASGALRPALLR 375 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + Q + + + + Sbjct: 376 QYVSRAAERVARLQLRPDYLERVYRDRATAF----------------------------- 406 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 +R+ S L+RG+ + + + + Sbjct: 407 -------------------DRLSRLFTSVNPDLPLQRGFARVM-AGDRLVKSVADAQAAG 446 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQ-----GTQGELF 529 + + F DG +A + AP ++ P + + K Q +LF Sbjct: 447 AVSLRFRDGAVDATIGGAAPLEKPPAEAISNPSRPPRKPRGGKETGQQDLF 497 >gi|84515408|ref|ZP_01002770.1| Exonuclease VII, large subunit [Loktanella vestfoldensis SKA53] gi|84510691|gb|EAQ07146.1| Exonuclease VII, large subunit [Loktanella vestfoldensis SKA53] Length = 499 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 190/500 (38%), Positives = 280/500 (56%), Gaps = 10/500 (2%) Query: 1 MNPFSQKNSL----DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 M+ F + + PE+SVSE+S +K +E +H+ VRGE+ G SSGH Y Sbjct: 2 MDLFEDGPTDKSADNTPEFSVSEISGAVKKTIEGGFAHIRVRGEL-GRISRPSSGHIYLD 60 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 LKD+ S + IIWKG + PEEG+E + GK+TTFPG SKYQ+IIE + P+G+G L Sbjct: 61 LKDDRSVLSGIIWKGRATALTHRPEEGMEVIATGKLTTFPGQSKYQMIIEDIQPAGAGAL 120 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVII 176 + LEKR+ L EGLF K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V++ Sbjct: 121 MAMLEKRRVMLAGEGLFDAARKKPLPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLV 180 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 +PV VQG +C E+A AI N L G PRPD+II+ARGGGS+EDLW FN+E++VRA Sbjct: 181 WPVAVQGQKCAAEVAAAIDGFNRLTPGGALPRPDLIIVARGGGSLEDLWGFNEEIVVRAA 240 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A S IP+ISA+GHETD TL D+AAD+RAPTPT AAE+AVPV+ L + + ARL + Sbjct: 241 AASDIPLISAVGHETDTTLIDFAADIRAPTPTAAAELAVPVRIELLAFVDQQGARLVRAL 300 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + L L +ALP D R RLD L L L +K + Sbjct: 301 SNGVQTRRQRLRDLARALPRVDTLADGPRQRLDYLADRLPAALRQAAAQKRLQLSDAA-- 358 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 ++ L + ++R+ + + +++ R + + A + + + R+ Sbjct: 359 LRPAILQRRLAEDRRRLSALSDRLAPALQRRSRDAAVTLER--AGRGLRCDLLQTRLDRQ 416 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 + ++ R+ + + ++ R+ ++ Y TLKRGY ++ + +T Sbjct: 417 AERLSSVLARLSDRATRQQTERTARLAALDRLRETLGYMETLKRGYAVVR-AGDVLVTDT 475 Query: 477 RNLATKTRILINFFDGQANA 496 A + I F DG+ Sbjct: 476 VAAAKADHLEIQFADGRIAV 495 >gi|261492150|ref|ZP_05988721.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495920|ref|ZP_05992340.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308417|gb|EEY09700.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312223|gb|EEY13355.1| exodeoxyribonuclease VII [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 530 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 146/492 (29%), Positives = 248/492 (50%), Gaps = 12/492 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +V++L+Y ++H++E +SH+ + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 46 SNILTVTQLNYSVRHLLEMEMSHIWLTGEISNF-SQPVSGHWYLTLKDDKAQVRCAMFKM 104 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV +T + YQ+IIES+ P+G G L E+ K KL +G Sbjct: 105 KNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKAKLSAQG 164 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ +HK PIP K + +ITS +GA ++DIL + R P L V+I+P VQG E ++I Sbjct: 165 LFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDPSLSVVIYPALVQGKEATQDI 224 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N E D++I+ RGGGS+EDLW FN+E + AI +S IPIISA+GHE Sbjct: 225 VNMIELANRRNE------CDVLIVGRGGGSLEDLWCFNEESVAYAIYHSQIPIISAVGHE 278 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ + L+ L + ++N R+ +K N L Sbjct: 279 TDVTIADFVADLRAPTPSAAAELVSRDQNELKRQLQHQFDKVNLAFDRVWNHKFNRFQQL 338 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + R D + LE + ++ K + + R+ I++ Sbjct: 339 PLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQVGKELNVRLIHQHPQKQIER 398 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 Q + + + + + + ++K K R +++ T + K+ R+ Sbjct: 399 QSQMLKQLELKLH--WQMEQQLSKKQQKWKNITQRFERNPLPYQLYQQQTMVAKMSQRLA 456 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + + L + L RGY+ Q + +T N+ I+ Sbjct: 457 YSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQTKDGKTLTSTENIERGEAIITQ 516 Query: 489 FFDGQANAIVIN 500 G+ + V++ Sbjct: 517 LKTGKIISQVVD 528 >gi|254419247|ref|ZP_05032971.1| exodeoxyribonuclease VII, large subunit [Brevundimonas sp. BAL3] gi|196185424|gb|EDX80400.1| exodeoxyribonuclease VII, large subunit [Brevundimonas sp. BAL3] Length = 533 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 183/526 (34%), Positives = 287/526 (54%), Gaps = 7/526 (1%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + ++P S+SELS+ LK +E HV +RGE+S H+SGH Y +LKD+ S I Sbjct: 14 AAAPRDNNPPLSISELSFALKRTLEERFGHVRLRGEVSKVN-RHASGHIYLTLKDDKSAI 72 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 D +IWKG++ + PE G+E +V GKIT++P S YQI+IES+ +G+G LL LE+ K Sbjct: 73 DGVIWKGSVRGLGVQPEAGLEVIVTGKITSYPARSSYQIVIESMEAAGAGALLAQLERLK 132 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 +L EEGLF K P+P P+ I VITSPTGAVIRD+L RI+ R+P RVI++PV VQG+ Sbjct: 133 VRLREEGLFEPGRKKPLPQFPRTIGVITSPTGAVIRDVLHRIAERWPCRVIVWPVVVQGE 192 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +++NAI + + PRPD++I+ARGGGS+EDLW FNDE + R +A + IPII Sbjct: 193 AACGQVSNAIRGFDAMTVDGPIPRPDLLIVARGGGSVEDLWCFNDEGLARTVAAARIPII 252 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD TL D+ +D RAPTPTGAAE+A PV L+ ++ +L+ R+ RLI+ + Sbjct: 253 SAVGHETDTTLIDFVSDRRAPTPTGAAEIATPVLADLRYAVADLDRRMVLAGGRLIEDRR 312 Query: 305 NTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L ++ + LP + L+ ++ RLD L L+ + RH ++ L Sbjct: 313 TRLRAVARGLPARPEDLLALAQQRLDNAASRLGSGLQRNVALHERHLAVTGGKLSPALLR 372 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I++ + + + ++ + + A L R+ ++ L Sbjct: 373 ARIERGQDRLRGAGDRLGAALQAGVARGERRLLQVSARLSPAP--LHRRLDQREARLQAL 430 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R++ ++ +++ ++ TR L + K G+ +++ + ++IT L Sbjct: 431 GARLDGVMPRRLERDADRLAGLTRALATLDPGRP-KPGFARVENPDGDWITSAATLEAGQ 489 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG AI+ + + + QG+LF Sbjct: 490 AVRLVFGDGARGAIIDGG--DGRTASAPARPAPRPKPAAPGQGDLF 533 >gi|83858533|ref|ZP_00952055.1| putative exodeoxyribonuclease protein [Oceanicaulis alexandrii HTCC2633] gi|83853356|gb|EAP91208.1| putative exodeoxyribonuclease protein [Oceanicaulis alexandrii HTCC2633] Length = 484 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 189/532 (35%), Positives = 278/532 (52%), Gaps = 54/532 (10%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + ++ + PEY+VSELS LK VE HV VRGE+ G + SGH Y +KD+ + Sbjct: 1 MTDASASNTPEYTVSELSNALKRTVEQAYDHVRVRGEL-GRVTVAKSGHVYLDMKDDKAV 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID ++WKG + F PEEG+E + G+++TFPG SKYQ+IIE + P+G G L+ LE R Sbjct: 60 IDGVMWKGVAAHLNFRPEEGLEVIAEGRLSTFPGRSKYQMIIERMEPAGEGALMALLEAR 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 KK L EGLFS K +PF+P++I V+TSPTGAVIRDIL R+ RFP+ V+++PV VQG Sbjct: 120 KKALAAEGLFSPDGKRALPFLPRVIGVVTSPTGAVIRDILHRLEDRFPVHVLLWPVLVQG 179 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ +IA+AI N ++ G P PD++I+ARGGGSIEDLW FN+E +VRA A S IP+ Sbjct: 180 EKAADQIAHAIEGFNAIEPGGPVPVPDVLIVARGGGSIEDLWCFNEERVVRAAAASRIPL 239 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL DYA+D RAPTPTGAAE+AVPV+ L + ARL + ++R + K Sbjct: 240 ISAVGHETDTTLIDYASDRRAPTPTGAAEIAVPVRRELVERISTTTARLMSALVRGLDRK 299 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L S + LP+ TL+ + +LD + L + + RK +++ L Sbjct: 300 AADLKSASRGLPSPRATLNENNQKLDFIASRLNGAAQSGLERKQTRLQAAALQMRPTALR 359 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 ++ + +EQ Sbjct: 360 RDLAIKGDRFQQSGARLEQA---------------------------------------- 379 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ ++ L++ ++K+ L+RG+ ++D + + Q L + Sbjct: 380 -------FRRELGDQARTLGSLGARLEALSHKSVLRRGFALVKDESGALVRQGAALTSGQ 432 Query: 484 RILINFFDGQANAIVINKAPPKEQPT------KKCQLHNNKREKQGTQGELF 529 + + F D AIV + K + K+ QG LF Sbjct: 433 AVTLVFEDTTRGAIVDGASSASPSSASKPAARPKSATKSRKKPSSPDQGSLF 484 >gi|170744124|ref|YP_001772779.1| exodeoxyribonuclease VII, large subunit [Methylobacterium sp. 4-46] gi|168198398|gb|ACA20345.1| exodeoxyribonuclease VII, large subunit [Methylobacterium sp. 4-46] Length = 507 Score = 391 bits (1003), Expect = e-106, Method: Composition-based stats. Identities = 198/521 (38%), Positives = 283/521 (54%), Gaps = 32/521 (6%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + E+SV++L+ LK +E HV +RGEISGYRG H SGHAYFSLKD ++IDA+I Sbjct: 17 PANLTEWSVTDLAAALKRTLEDAFGHVRLRGEISGYRGPHGSGHAYFSLKDGGAKIDAVI 76 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 WKGTL ++ P+EG+E + G+ITTFPG S YQI+I+SL P+G+G + LE+R++ L Sbjct: 77 WKGTLARLRHRPKEGLEVVATGRITTFPGKSAYQIVIDSLEPAGAGAWMALLEERRRLLA 136 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EGLF K P+P++P+++ V+TSPTGAVIRDIL R++ RFP V+++PV+VQG+ + Sbjct: 137 AEGLFDAARKRPLPYLPRVVGVVTSPTGAVIRDILHRLADRFPRPVLVWPVRVQGEGSAE 196 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+A AI N L PRPD++I+ARGGGSIEDLW FN+E++VRA A S+IP+I+A+G Sbjct: 197 EVAAAIRGFNALAPDGPIPRPDVLIVARGGGSIEDLWSFNEEIVVRAAAASAIPLIAAVG 256 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TL D+AAD RAPTPTGAAEMAVPV+ L + L L R + RLI+ + L Sbjct: 257 HETDVTLIDHAADRRAPTPTGAAEMAVPVRLDLVADLDGLARRHAASLARLIERRRADLR 316 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + LP + L+ R RLD L L ++ + ++ + Sbjct: 317 GLARVLPTPEGLLAVKRQRLDLAEARLRPALGEAARAAQGRLARLLQALGRHPPALHLAR 376 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R + R + I + + R+ Sbjct: 377 ARARLAGIDHR-------------------------PRHALERLIAVRAERLNGVAQRLA 411 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 S ++ + + + S Y+ L+RGY + D + + RI + Sbjct: 412 QAESRDLERRRARFAAASGLFDSLNYRAVLQRGYALVLDAEGRPVAEAEAARAAGRITVE 471 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 F DG+ A+V APP+ K+ Q LF Sbjct: 472 FQDGKVGAVV-EGAPPRRAAAKRGP------AAPARQTSLF 505 >gi|254361538|ref|ZP_04977676.1| exodeoxyribonuclease VII [Mannheimia haemolytica PHL213] gi|153093056|gb|EDN74072.1| exodeoxyribonuclease VII [Mannheimia haemolytica PHL213] Length = 486 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 145/492 (29%), Positives = 248/492 (50%), Gaps = 12/492 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +V++L+Y ++H++E +SH+ + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 2 SNILTVTQLNYSVRHLLEMEMSHIWLTGEISNF-SQPVSGHWYLTLKDDKAQVRCAMFKM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV +T + YQ+IIES+ P+G G L E+ K KL +G Sbjct: 61 KNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGEGLLQQQFEQLKAKLSAQG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ +HK PIP K + +ITS +GA ++DIL + R P L V+I+P VQG E ++I Sbjct: 121 LFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDPSLSVVIYPALVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N E D++I+ RGGGS+EDLW FN+E + AI +S IPIISA+GHE Sbjct: 181 VNMIELANRRNE------CDVLIVGRGGGSLEDLWCFNEESVAYAIYHSQIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ + L+ + + ++N R+ +K N L Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQNELKRQVQHQFDKVNLAFDRVWNHKFNRFQQL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + R D + LE + ++ K + + R+ I++ Sbjct: 295 PLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQVGKELNVRLIHQHPQKQIER 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 Q + + + + + + ++K K R +++ T + K+ R+ Sbjct: 355 QSQMLKQLELKLH--WQMEQQLSKKQQKWKNITQRFERNPLPYQLYQQQTMVAKMSQRLA 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + + L + L RGY+ Q + +T N+ I+ Sbjct: 413 YSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQTKDGKTLTSTENIERGEAIITQ 472 Query: 489 FFDGQANAIVIN 500 G+ + V++ Sbjct: 473 LKTGKIISQVVD 484 >gi|163868905|ref|YP_001610131.1| exodeoxyribonuclease VII large subunit [Bartonella tribocorum CIP 105476] gi|189037855|sp|A9IXA1|EX7L_BART1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|161018578|emb|CAK02136.1| exodeoxyribonuclease VII large subunit [Bartonella tribocorum CIP 105476] Length = 476 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 211/530 (39%), Positives = 304/530 (57%), Gaps = 56/530 (10%) Query: 1 MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 +N S+K S + E++VSE++ LK +VE +V VRGEISGYRG H+SGHAYF+LKD Sbjct: 2 VNLLSEKTSGTNVAEFTVSEIAGALKRVVEEKFGYVRVRGEISGYRGAHASGHAYFALKD 61 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T Sbjct: 62 DKARLEAVIWRGVMEKLKFPPEEGMEVVAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 121 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKK EEGLF + K P+P++P+II V+TSPTGAVIRDI+ RIS RFPL V+++PV Sbjct: 122 LENRKKKFAEEGLFDEAKKKPLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHVLVWPV 181 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ E+A A+ N L P+PD+II+ARGGGS+EDLW FNDE +VRA+ S Sbjct: 182 RVQGETSGSEVAAAVEGFNALASEGHIPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYAS 241 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +PIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK L+ + +L ARL + R Sbjct: 242 DLPIISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKLDLEVCVASLGARLRKGLARS 301 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + + LP++DQ S R D + L+ L + +K F+ + R+ Sbjct: 302 FDFHQQKLCAARRGLPSADQLFSLPRRGFDEISSRLQRALCVSYDKKRFSFHALHLRLSP 361 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L +K ++H E + + Sbjct: 362 RLL--KSEKAQRHTKEYTARLYRAFM---------------------------------- 385 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ +++ + R+L+S +Y+N L+RG+ + N+ I + Sbjct: 386 -------------RSVEKKRSALELACRLLKSTSYQNILERGFVLVLGQNHKPIKRLAQF 432 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG + +E + H + QG LF Sbjct: 433 PESGQINLRFFDGDIHV------ATQEPFSAARSKHKKIKSPSDDQGTLF 476 >gi|238895963|ref|YP_002920699.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae NTUH-K2044] gi|330007829|ref|ZP_08306087.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. MS 92-3] gi|238548281|dbj|BAH64632.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328535317|gb|EGF61803.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. MS 92-3] Length = 463 Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 147/513 (28%), Positives = 236/513 (46%), Gaps = 57/513 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K +L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF +HK +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + +E + R + + R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLNHYNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 RIHRAQSRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ L++ + TL RGY+ ++ + Q + + T Sbjct: 375 ------MRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + DG + V AP K+ +K Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPTKP 461 >gi|152971366|ref|YP_001336475.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|166232356|sp|A6TCC4|EX7L_KLEP7 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|150956215|gb|ABR78245.1| exodeoxyribonuclease VII large subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 463 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 147/513 (28%), Positives = 236/513 (46%), Gaps = 57/513 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K +L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF +HK +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + +E + R + + R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLNHYNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 RIHRAQSRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ L++ + TL RGY+ ++ + Q + + T Sbjct: 375 ------MRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + DG + V AP K+ +K Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPTKP 461 >gi|290508299|ref|ZP_06547670.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. 1_1_55] gi|289777693|gb|EFD85690.1| exodeoxyribonuclease VII, large subunit [Klebsiella sp. 1_1_55] Length = 463 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 146/513 (28%), Positives = 235/513 (45%), Gaps = 57/513 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K +L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF +HK +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + +E + R + + R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLDHYNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ L++ + TL RGY+ ++ + Q + + T Sbjct: 374 -----NMRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + DG + V AP K+ +K Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPAKP 461 >gi|288934101|ref|YP_003438160.1| exodeoxyribonuclease VII large subunit [Klebsiella variicola At-22] gi|288888830|gb|ADC57148.1| exodeoxyribonuclease VII, large subunit [Klebsiella variicola At-22] Length = 463 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 147/513 (28%), Positives = 235/513 (45%), Gaps = 57/513 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K +L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF +HK +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + +E I R + + R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQIKRAEQRQKRTVQRLDHYNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ L++ + TL RGY+ ++ + Q + + T Sbjct: 374 -----NMRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + DG + V AP K+ +K Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPAKP 461 >gi|206579351|ref|YP_002237142.1| exodeoxyribonuclease VII, large subunit [Klebsiella pneumoniae 342] gi|226736766|sp|B5XNM2|EX7L_KLEP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|206568409|gb|ACI10185.1| exodeoxyribonuclease VII, large subunit [Klebsiella pneumoniae 342] Length = 463 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 146/513 (28%), Positives = 234/513 (45%), Gaps = 57/513 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K +L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF +HK +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + +E + R + + R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLDHYNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ L++ + TL RGY+ + + Q + + T Sbjct: 374 -----NMRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVNDGTVLKQTKQVKTGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + DG + V AP K+ +K Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARKPSPTKP 461 >gi|254511401|ref|ZP_05123468.1| exodeoxyribonuclease VII, large subunit [Rhodobacteraceae bacterium KLH11] gi|221535112|gb|EEE38100.1| exodeoxyribonuclease VII, large subunit [Rhodobacteraceae bacterium KLH11] Length = 495 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 182/531 (34%), Positives = 268/531 (50%), Gaps = 38/531 (7%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PEYSVS++S +K +E + VRGE+ G SGH Y+ +K Sbjct: 1 MSDLLDDPVPGQNTPEYSVSDISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + WKG ++ + +PEEG+E +V G++T F SKY + ++ + +G G L+ Sbjct: 60 DDRNVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGAQSKYNLNVDEVAVAGQGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRKK+L EGLF+ + K P+P++P+II VITSP+GAVIRDIL R+ RFP +V+I+P Sbjct: 120 LLEKRKKQLESEGLFAPERKKPLPYLPQIIGVITSPSGAVIRDILHRLRDRFPRKVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG C E+ AI N L G PRPD+II+ARGGGSIEDLW FN+E + RA A Sbjct: 180 VAVQGANCAPEVTRAIEGFNQLTPGGALPRPDLIIVARGGGSIEDLWGFNEENVARAAAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S+IP+ISA+GHETD TL DY +D RAPTPT AAE+AVPV+ L + ARL+ Sbjct: 240 SAIPLISAVGHETDTTLIDYVSDRRAPTPTAAAELAVPVRMELLAWTREQGARLSRAATD 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L L +ALP + L R RLD+ L + L + + ++ Sbjct: 300 AVQRRSQRLRDLARALPRPETLLDSPRQRLDQAAERLPNALIRGVQTRRVKLLDSAAHLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + R + + + Sbjct: 360 PSTLRNLVATRRDRWHNLSSRLS------------------------LRPIQRELTTRRD 395 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + +L R+ ++ H + T R+ ++ +YK TL+RGY I+ ++ +T+K Sbjct: 396 TLNRLTERLNTAQITRLDRLHQQLDATDRLRETLSYKATLERGYAVIR-AGDHVLTRKAQ 454 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 T I F DG N + + QG LF Sbjct: 455 AEKHTTFEIEFADGTLNT----------GQGGGAKPKRTPKPPAPDQGSLF 495 >gi|126740019|ref|ZP_01755709.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. SK209-2-6] gi|126718838|gb|EBA15550.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. SK209-2-6] Length = 544 Score = 389 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 179/545 (32%), Positives = 275/545 (50%), Gaps = 42/545 (7%) Query: 1 MNPFSQ--KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + + PE+SVSE+S +K +E + V+GE+ G SGH Y+ +K Sbjct: 26 MSDLFDDPQPGQNTPEFSVSEISGEVKRTLEGTFGRIRVKGEV-GRVFKARSGHLYYDIK 84 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S + WKG ++ + +PEEG+E +V G++T F SKY + ++ + +G G L+ Sbjct: 85 DDRSVLACTTWKGQISSLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMA 144 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRKK+L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+++P Sbjct: 145 LLEKRKKQLEAEGLFAMERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWP 204 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG C E+A AI N L G PRPD+II+ARGGG+IEDLW FN+E++ RA A Sbjct: 205 VAVQGQNCAPEVARAIEGFNRLTPGGALPRPDLIIVARGGGAIEDLWGFNEEIVARAAAA 264 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+ +DLRAPTPT AAE AVPV+ L + ARL + + Sbjct: 265 SEIPLISAVGHETDTTLIDFVSDLRAPTPTAAAEHAVPVRLELMAWSEAQGARLTRGVSQ 324 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + LN L +A+P + L R RLDR+ L L + ++ + ++ Sbjct: 325 AVQQRRQRLNDLSRAIPRPETLLETPRQRLDRVSETLPRALMAGVQKRQVTLSRAAAALR 384 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + + + Sbjct: 385 PATLRQLVSSRQDRLRNLSSRLS------------------------PRPLDQEVDRQKE 420 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + +L R++ +++ S++ R L+ +YK TL RGY ++ + IT Sbjct: 421 QLSRLGIRLKSAQDLRLERMQRSLATAGRQLEILSYKATLDRGYAVVRSGAD-LITSSVE 479 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ--------------LHNNKREKQGT 524 + I F DG+ +A + + + + G Sbjct: 480 AQNAGPLTIEFADGEFRLENTEEAATEAASGPQQKSASSKQVTSKPVKQTKAKPEKPDGE 539 Query: 525 QGELF 529 QG LF Sbjct: 540 QGSLF 544 >gi|262040241|ref|ZP_06013492.1| exodeoxyribonuclease 7 large subunit [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259042350|gb|EEW43370.1| exodeoxyribonuclease 7 large subunit [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 463 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 146/513 (28%), Positives = 236/513 (46%), Gaps = 57/513 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEREMGQVWISGEISNF-SQPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K +L Sbjct: 62 MFRNSNRRVTFHPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF +HK +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 TAEGLFEQKHKQALPSPAHCVGVITSKTGAALHDILHVLRRRDPGLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIALANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLASRQRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + +E + R + + R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTALERLRQRMRIAVESQLKRAEQRQKRTVQRLNHYNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 RIHRAQSRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ L++ + TL RGY+ ++ + Q + + T Sbjct: 375 ------MRGRLSERRERFGNAVTHLEAVSPLATLARGYSVTSVSDGTVLKQTKQVKTGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + DG + V AP K+ ++ Sbjct: 429 LTTRLKDGWVESEVKQIAPVKKTRARRPSPTKP 461 >gi|307250047|ref|ZP_07532011.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306857907|gb|EFM89999.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 517 Score = 388 bits (997), Expect = e-105, Method: Composition-based stats. Identities = 143/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 33 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 92 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 326 KLRLNAQHPARQIQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVKQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 504 LSQGEIVSEIIKIN 517 >gi|294013432|ref|YP_003546892.1| exodeoxyribonuclease VII large subunit [Sphingobium japonicum UT26S] gi|292676762|dbj|BAI98280.1| exodeoxyribonuclease VII large subunit [Sphingobium japonicum UT26S] Length = 499 Score = 388 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 181/531 (34%), Positives = 270/531 (50%), Gaps = 55/531 (10%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 +++ + P SVSELS LK VE HV +RGEISG++ SGH Y LKD+++ Sbjct: 17 AEERSGDNAPPLSVSELSALLKRTVEDRFGHVRLRGEISGFK-RAGSGHIYLCLKDDNAV 75 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID ++WKG ++ F P++G+E + GK+TT+PG SKYQI+I+ + +G G L+ LEK Sbjct: 76 IDGVMWKGGAARLPFAPQDGVEVIATGKLTTYPGRSKYQIVIDRMELAGEGALMALLEKL 135 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K+KL EGLF K +PF+P++I V+TSPTGAVIRDIL R+ R P +V+++PV VQG Sbjct: 136 KQKLAAEGLFDRSAKRRLPFMPRVIGVVTSPTGAVIRDILHRLEDRCPTQVLLWPVLVQG 195 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +++A A+ + ++ G PRPD++I+ARGGGSIEDLW FN+E++VRA+A SSIPI Sbjct: 196 QGAAEQVARAVRGFSAMQPGGPIPRPDLVIVARGGGSIEDLWSFNEEIVVRAVAESSIPI 255 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL DYAAD+RAPTPT AAEMAVPV+ L + L R++ + R Sbjct: 256 ISAVGHETDTTLCDYAADMRAPTPTAAAEMAVPVRAELLAMLTEQGLRMDRAVRRGAAQA 315 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ + +P D L+ R RLD+L L L I H ++ L Sbjct: 316 RERLDMQARLMPTPDTLLAPQRQRLDQLSDGLASALRHRIADARTHLGQAGGALRPALLR 375 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + Q + + + + Sbjct: 376 QYVNRAAERVARLQLRPDYLERVYRDRATA------------------------------ 405 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 +R+ S L+RG+ + + + + Sbjct: 406 ------------------FDRVSRLFTSVNPDLPLQRGFARVM-AGDRLVKSVADAKAAG 446 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQ-----GTQGELF 529 + ++F DG A + P ++ P + + K Q +LF Sbjct: 447 AVSLHFRDGAVGATIEGGTPLEKPPAQAISNPSRPPRKPREGEEAGQPDLF 497 >gi|260598893|ref|YP_003211464.1| exodeoxyribonuclease VII large subunit [Cronobacter turicensis z3032] gi|260218070|emb|CBA32811.1| Exodeoxyribonuclease 7 large subunit [Cronobacter turicensis z3032] Length = 457 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 143/512 (27%), Positives = 235/512 (45%), Gaps = 61/512 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ + Sbjct: 2 PLTPTPS----IFTVSRLNQSVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTA 56 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ Sbjct: 57 QVRCAMFRNSNRRVTFRPQHGQQVLVRATITLYEPRGDYQIIVESMQPAGEGLLQQRYEQ 116 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K++L EGLF K P+P + + VITS TGA + D+L + R P L V+I+P V Sbjct: 117 LKQQLAAEGLFDPALKKPLPSPARQVGVITSKTGAALHDVLNVLRRRDPSLPVVIYPTAV 176 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD+ P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S I Sbjct: 177 QGDDAPAQIVRAIELANLRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRI 230 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 PI+SA+GHETD T+AD+ ADLRAPTP+ AAEM + L + L+ RL + + Sbjct: 231 PIVSAVGHETDVTIADFVADLRAPTPSAAAEMVSRNQLELLRQVQGLQQRLEMAMDYSLA 290 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L L +R + RL + +++ L+ + + + + R+ Sbjct: 291 NRQQRFTRLHHRLEQQHPQLRLARQQTLLMRLRQRMDNALDSRMRQATQRQTRLTQRLNQ 350 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + + I + + + Q+ Sbjct: 351 QQPLPRLHRASARIQQLEYRLAQL------------------------------------ 374 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ ++ L++ + TL RGY+ + N + + + Sbjct: 375 -----------VTARLSHTRERFGNAITHLEAVSPLATLARGYSVTTAQDGNVLKATKQV 423 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V P K+ KK Sbjct: 424 QPGDTLTTRLADGWVESEVRQITPAKKTRKKK 455 >gi|254490067|ref|ZP_05103260.1| exodeoxyribonuclease VII, large subunit [Methylophaga thiooxidans DMS010] gi|224464731|gb|EEF80987.1| exodeoxyribonuclease VII, large subunit [Methylophaga thiooxydans DMS010] Length = 485 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 144/493 (29%), Positives = 256/493 (51%), Gaps = 13/493 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y VS L + ++E + + V GEIS + +SGH YF+LKD +++ +++ Sbjct: 4 VYPVSRLVREARVLLEGSFPLLWVEGEISNL-AMPASGHIYFTLKDEAAQVRCAMFRNRN 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ L+ ++T + G ++Q+++E + +GSG L A E K++L +EGLF Sbjct: 63 RQLRFTPENGMQVLLRVRVTLYEGRGEFQLVVEHMEEAGSGALQRAYEALKQRLGQEGLF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D HK PIP +P I +I+SP GA + DI+ + RFP VI++PV VQG+ +++ + Sbjct: 123 DDAHKKPIPALPHTIGIISSPDGAAVHDIVSVLKRRFPAAAVILYPVAVQGEAAARQLVD 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ + K+ D++I+ RGGGS+EDLW FNDE + RA+ N +P+ISA+GHE D Sbjct: 183 AVKLADHRKD------CDVLIIGRGGGSLEDLWSFNDEQLARALFNCELPVISAVGHEID 236 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ AD+RAPTP+ AAE+AVP + L + + L RL + + + + L L + Sbjct: 237 FTIADFVADVRAPTPSAAAEIAVPDAKQLLAKIQGLTQRLTVMTKQWLVSEQRHLQHLQR 296 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 LP D L+ R L++ + L + I+ + +++ R+K I K + Sbjct: 297 RLPRPDVQLNQQRQVLNQQTKLLGSAWQRILMSSQQKLDYLSARLK--HPQAQIDKQQSK 354 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + Q + Q + ++ LH R+ + + H + + +++ ++ Sbjct: 355 LAALQHRLGQAFRAEFKHSETALLSLQQRLH--RQLPTHAVIRHHEALSLVRKQLDRLML 412 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRILINFFD 491 ++ + ++ R L + + NTL+RGY+ +T + I + Sbjct: 413 MQLDTAKQALKQQVRTLAAVSPLNTLERGYSITTRQQTAEVLTHAETVEKGEMIEVRLLQ 472 Query: 492 GQANAIVINKAPP 504 G V + + Sbjct: 473 GHLACEVKSVSKK 485 >gi|254466447|ref|ZP_05079858.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium Y4I] gi|206687355|gb|EDZ47837.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium Y4I] Length = 502 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 186/528 (35%), Positives = 279/528 (52%), Gaps = 34/528 (6%) Query: 2 NPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 +P + + PE++VSE+S +K +E + VRGE+ G SGH Y+ +KD+ Sbjct: 7 DPIPSDRPGQNAPEFTVSEISGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIKDD 65 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S + WKG ++ + +PEEG+E +V G++T F SKY + ++ + +G G L+ L Sbjct: 66 RSVLACTTWKGQISGLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMALL 125 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKRKK+L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+++PV Sbjct: 126 EKRKKQLEAEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+A AI N L G PRPD+II+ARGGGSIEDLW FN+E++ RA A S Sbjct: 186 VQGQNCAPEVARAIDGFNRLTPGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAASQ 245 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L + ARL + + Sbjct: 246 IPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELMAWTETQGARLTRAAGQAV 305 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + LN L +ALP D L R RLDR+ L L + R+ H + ++ Sbjct: 306 QLRRQRLNDLARALPKPDTLLETPRQRLDRISDRLPGALISGVQRRRVHLSETAASLRPA 365 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L ++ R + + + + + Sbjct: 366 TLRQLVEGRRNRLQNLSSRLS------------------------LRPIQREMAAQKDAL 401 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +L R++ + +I +++ T R L+ +YK TL+RGY ++ + +T + A Sbjct: 402 GRLAQRLDAAQAVRIDRQRQALTATGRQLEILSYKATLERGYAVVRSGD-EILTTRAAAA 460 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + I F DG + + T+ N K G QG L Sbjct: 461 KAGALQIEFADGTLD---LGGGAADAPKTEGP----NPLAKGGGQGTL 501 >gi|42521827|ref|NP_967207.1| exodeoxyribonuclease VII, large subunit [Bdellovibrio bacteriovorus HD100] gi|39574357|emb|CAE77861.1| exodeoxyribonuclease VII, large subunit [Bdellovibrio bacteriovorus HD100] Length = 468 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 149/494 (30%), Positives = 238/494 (48%), Gaps = 59/494 (11%) Query: 11 DHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + P SV +L+ ++K ++E + V V+GEIS ++ H+SGH YFSLKD+ S+I A+++ Sbjct: 30 NEPSVLSVEQLNIYVKQLLEGQIGQVWVKGEISNFKA-HTSGHFYFSLKDSRSQITAVMF 88 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G +++F P +G+E +V G+IT + YQ++ E + P G+G L A E+ K KL Sbjct: 89 RGNNARLKFKPTDGMEVIVRGRITVYEPRGNYQLMCEMMEPVGAGALQKAFEQLKMKLKA 148 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EGLF K PIP P+ IA++TSPTGA IRDIL +S R ++V + P VQG+ Sbjct: 149 EGLFESARKKPIPTFPRHIAIVTSPTGAAIRDILNVLSRRAKAIQVTVVPTIVQGEAAAP 208 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I A + L P D++I+ RGGGSIED+W FNDE + R IA S +P+ISA+G Sbjct: 209 QICEAFKKATAL------PGVDVVIVGRGGGSIEDMWCFNDERLARLIAASPVPVISAVG 262 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+T+AD+ ADLRAPTP+ AAE+ L + +++LE L+ + +K+ + Sbjct: 263 HEIDFTIADFVADLRAPTPSAAAELVAKSSGELANKVVSLERMLHLTFEKKMKFLREKML 322 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L K L + + L R D L LE + + + + ++ I + Sbjct: 323 GLSKRLVDPKRRLQDLELRNDDLLNRLEFAINRRLAERRHRVELMSQKLG--SPQDLIDE 380 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + + E+ + Sbjct: 381 KKKDLEYLKARSEKALHFS----------------------------------------- 399 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 I+ + +L S + ++RGY+ + N+ I + + I Sbjct: 400 ------IERKKARMGKVMAMLDSLSPLKVVERGYSIVT-KNSEVIKSASQVKKGDLLDIR 452 Query: 489 FFDGQANAIVINKA 502 G AIV Sbjct: 453 LAQGSVTAIVDGVK 466 >gi|296104183|ref|YP_003614329.1| exodeoxyribonuclease VII large subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058642|gb|ADF63380.1| exodeoxyribonuclease VII large subunit [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 457 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 145/509 (28%), Positives = 234/509 (45%), Gaps = 57/509 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S Y+VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQSPSIYTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAAL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 SQEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S+IPI+SA Sbjct: 182 PGQIVRAIELANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASAIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ + L + N + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQLELLRQIQNCQQRLEMAMDYFLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + L+ + R + R+ Sbjct: 296 FTQLHHRLQQQHPQLRLARQQTVLERLRQRMNFALDNQLKRAMSRQQRVTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIYRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ + L++ + +TL RGY+ T+ + Q + + Sbjct: 374 -----TVRARLSTTRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQVKAGDV 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQ 513 + DG + V K+ +K Sbjct: 429 LTTRLSDGWVESEVKGVMSVKKPRARKKA 457 >gi|307256866|ref|ZP_07538644.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864600|gb|EFM96505.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 517 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 33 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 92 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL +I Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGMQITTK 503 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 504 LSQGEIVSEIIKIN 517 >gi|54307974|ref|YP_128994.1| exodeoxyribonuclease VII large subunit [Photobacterium profundum SS9] gi|81828837|sp|Q6LU33|EX7L_PHOPR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|46912400|emb|CAG19192.1| putative exodeoxyribonuclease VII, large subunit [Photobacterium profundum SS9] Length = 448 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 142/503 (28%), Positives = 240/503 (47%), Gaps = 58/503 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F+Q S D ++VS L+ ++ ++E+ + V + GE+S + SGH YF+LKD+ Sbjct: 1 MTLFTQTQSNDR-IFTVSSLNAEVRLLLENEMGIVWLVGELSNL-SMPVSGHWYFTLKDS 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++G ++ F P G + LV +++ + YQ+IIES+ P G G L Sbjct: 59 RAQVKCAMFRGNNRRVTFKPANGTQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K L EGLF+ K P+P PK I +ITS TGA + DIL + R P L V+I+P Sbjct: 119 EQLKMSLAAEGLFAQALKKPLPEQPKRIGIITSKTGAALHDILTVLHRRDPSLPVVIYPT 178 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQGD IA AI + N +E D++I+ RGGGS+EDLW FN+E++ R IA S Sbjct: 179 MVQGDGSAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 232 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+ H + +L N I Sbjct: 233 QIPIVSAVGHEVDVTIADFVADMRAPTPSAAAELVSRDITHQTQKIQQKNQQLKNAIRTY 292 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L L + L+ + LD + LE + ++ ++H I ++ Sbjct: 293 LSKREAKTVQLTHRLERQHPQLRLNQQQQHLDDISSRLERAMGRLLSSHHQHVERINYKL 352 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + I+ N+ + ++++ + Sbjct: 353 SLHSPVQTIKNNQTTLDQRKRRLL------------------------------------ 376 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + H++ + + +++ L++ + TL RGY+ +D I Sbjct: 377 -----------DAMDHRLLNANHKLALAAEKLETVSPLATLSRGYSITRDAKGKVIRHID 425 Query: 478 NLATKTRILINFFDGQANAIVIN 500 + +++ DG+ ++ V Sbjct: 426 QVKPGDKLVTKVTDGEIHSTVSE 448 >gi|90410882|ref|ZP_01218896.1| exodeoxyribonuclease VII large subunit [Photobacterium profundum 3TCK] gi|90328095|gb|EAS44406.1| exodeoxyribonuclease VII large subunit [Photobacterium profundum 3TCK] Length = 448 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 141/503 (28%), Positives = 240/503 (47%), Gaps = 58/503 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F+Q S D ++VS L+ ++ ++E+ + V + GE+S + SGH YF+LKD+ Sbjct: 1 MTLFTQTQSNDR-IFTVSSLNAEVRLLLENEMGIVWLVGELSNL-SMPVSGHWYFTLKDS 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++G ++ F P G + LV +++ + YQ+IIES+ P G G L Sbjct: 59 RAQVKCAMFRGNNRRVTFKPANGTQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K L EGLF+ K P+P PK + +ITS TGA + DIL + R P L V+I+P Sbjct: 119 EQLKMSLAAEGLFAQVLKKPLPEQPKRVGIITSKTGAALHDILNVLHRRDPSLPVVIYPT 178 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQGD IA AI + N +E D++I+ RGGGS+EDLW FN+E++ R IA S Sbjct: 179 MVQGDGSAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 232 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+ H + +L N I Sbjct: 233 QIPIVSAVGHEVDVTIADFVADMRAPTPSAAAELVSRDITHQTQKIQQKNQQLKNAIHTY 292 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L L + L+ + LD + LE + ++ ++H I ++ Sbjct: 293 LSKREAKTVQLTHRLERQHPQLRLNQQQQHLDDISSRLELAMGRLLSSHHQHVERINYKL 352 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + I+ N+ + ++++ + Sbjct: 353 SLHSPVQTIKNNQTTLDQRKRRLL------------------------------------ 376 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + H++ + + +++ L++ + TL RGY+ +D I Sbjct: 377 -----------DAMDHRLLNANHKLALAAEKLETVSPLATLSRGYSITRDAKGKVIRHID 425 Query: 478 NLATKTRILINFFDGQANAIVIN 500 + +++ DG+ ++ V Sbjct: 426 QVKPGDKLVTKVTDGEIHSTVSE 448 >gi|190150143|ref|YP_001968668.1| exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263480|ref|ZP_07545095.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915274|gb|ACE61526.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871123|gb|EFN02852.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 517 Score = 386 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 33 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 92 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 152 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLR PTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 266 TDVTIADFVADLRVPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVAQTSKGEILRSTENLKVGTQITTK 503 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 504 LSQGEIVSEIIKIN 517 >gi|149202158|ref|ZP_01879131.1| exodeoxyribonuclease VII, large subunit [Roseovarius sp. TM1035] gi|149144256|gb|EDM32287.1| exodeoxyribonuclease VII, large subunit [Roseovarius sp. TM1035] Length = 495 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 190/531 (35%), Positives = 284/531 (53%), Gaps = 38/531 (7%) Query: 1 MNPFSQKNSL--DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PE+SVS+LS +K ++E SHV VRGE+ G SGH Y LK Sbjct: 1 MSDLIDDPQEGGNAPEFSVSDLSGAIKRMIEGEFSHVRVRGEL-GRISRPRSGHIYLDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + + IIWKG ++ PEEG+E + G++TTFPG S+YQIIIE + P+G G L+ Sbjct: 60 DDSAVLAGIIWKGVATRLAVQPEEGMEVVATGRLTTFPGQSRYQIIIEDMKPAGMGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRK L EGLF+ + K +P++P+II V+TSP+GAVIRDIL R+ RFP +V+I+P Sbjct: 120 MLEKRKAALAAEGLFASERKQALPYLPEIIGVVTSPSGAVIRDILHRLRDRFPRKVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQGD+C E+A AI N + G PRPD+II+ARGGGS+EDLW FN+E++VRA A Sbjct: 180 VAVQGDKCAAEVARAIRGFNAMTPGGALPRPDLIIVARGGGSVEDLWGFNEEIVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S+IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVPV+ L + + ARL++ + + Sbjct: 240 SAIPLISAVGHETDTTLIDFASDKRAPTPTAAAELAVPVRMDLLAWVEGQGARLSHALSQ 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L L +ALP ++ L R RLD L L L + + H + ++ Sbjct: 300 GVRLRGQRLRDLARALPRAEVLLDGPRQRLDALGERLPAALIRSVQVRRVHLSETAGALR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L ++ +R+ + + I Sbjct: 360 PALLRRAVEGDRRRLQATAARL------------------------NVHALNRDIAQKRR 395 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + ++ R+ + +++ ++ R+ ++ YK TL RGY ++ + +T + Sbjct: 396 DLDQVSARLSDVAGRQVRGWQDRLAALERLRETLGYKATLSRGYAVVRG-DGAVMTTRAA 454 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 A + I F DG + + + QG LF Sbjct: 455 AAGAAALQIEFADGVLDV----------SGSSAAAPKPKPKTPPAGQGSLF 495 >gi|307245679|ref|ZP_07527765.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254646|ref|ZP_07536475.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307259093|ref|ZP_07540823.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853381|gb|EFM85600.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862391|gb|EFM94356.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866760|gb|EFM98618.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 517 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 33 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL +G Sbjct: 92 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAQG 151 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYYVEKKNQQYAQLAQRLQ 443 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 504 LSQGEIVSEIIKIN 517 >gi|307261299|ref|ZP_07542974.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869030|gb|EFN00832.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 517 Score = 385 bits (989), Expect = e-104, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 33 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL +G Sbjct: 92 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAQG 151 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 152 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 504 LSQGEIVSEIIKIN 517 >gi|300717943|ref|YP_003742746.1| exodeoxyribonuclease VII large subunit [Erwinia billingiae Eb661] gi|299063779|emb|CAX60899.1| Exodeoxyribonuclease VII large subunit [Erwinia billingiae Eb661] Length = 459 Score = 385 bits (989), Expect = e-104, Method: Composition-based stats. Identities = 148/514 (28%), Positives = 237/514 (46%), Gaps = 59/514 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S S + ++VS L+ ++ ++E + V + EIS + SSGH YF+LKD+ ++ Sbjct: 1 MSLPPSAN--IFTVSRLNTTVRKLLEMEMGQVWLSAEISNF-SQPSSGHWYFTLKDDGAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ + ++ F P+ G + LV IT + YQ+I ES+ P+G G L E+ Sbjct: 58 VRCAMFRNSNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGEGLLQQQFEQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K+KL+ EGLF HK P+P + + VITS TGA + D+L+ + R P L V+I+P VQ Sbjct: 118 KQKLMSEGLFEQSHKQPLPDPARQVGVITSSTGAALHDVLRVLHRRDPSLPVVIYPTPVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + P I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP Sbjct: 178 GVDAPASIVRAIETANARAE------CDVLIVGRGGGSLEDLWSFNDERVARAIYASRIP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L L + + RL + + Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELLRQLQSQQTRLEMAMDYYLAQ 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 K T + L L +R + RL R L+ +++ + + R R+ + Sbjct: 292 KSRTFTRIQHRLQQQHPQLRLARQQTALMRLQRRLDDAMQLRVRQAGRQQERAKQRLSAF 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I + +Q++ + Q ++Q Sbjct: 352 QPQARIHRAQQNLQQWQYRLQQA------------------------------------- 374 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + ++ S T L+ + TL RG++ + + + R + Sbjct: 375 ----------MQQQLNGGKQRFSTLTAQLEGVSPLATLARGFSVTTAQDGQVVKKTRQVQ 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQL 514 T + DG + V P K+ K Sbjct: 425 TGDTLKTRLDDGWVESEVTAVTPTKKPRKPKNPA 458 >gi|126208293|ref|YP_001053518.1| exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae L20] gi|126097085|gb|ABN73913.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 486 Score = 385 bits (988), Expect = e-104, Method: Composition-based stats. Identities = 143/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 2 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 61 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 121 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 472 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 473 LSQGEIVSEIIKIN 486 >gi|311278570|ref|YP_003940801.1| exodeoxyribonuclease VII, large subunit [Enterobacter cloacae SCF1] gi|308747765|gb|ADO47517.1| exodeoxyribonuclease VII, large subunit [Enterobacter cloacae SCF1] Length = 457 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 146/508 (28%), Positives = 234/508 (46%), Gaps = 57/508 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+++++ Sbjct: 3 PSQSPSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K +L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF Q K P+P + + VITS TGA + DIL + R P L +II+P VQGD+ Sbjct: 122 SQEGLFDQQCKQPLPSPARCVGVITSKTGAALHDILHVLKRRDPSLPIIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASLIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ + L L N + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQLELLRQLQNGQQRLEMAMDYFLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + L+ + R + I R+ Sbjct: 296 FTQLHHRLQQQHPQLRLARQQTVLERLRQRMSFALDNQLRRAGQRQQRITQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLVE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ + N + Q + + Sbjct: 374 -----NARARLSATRERFGNAVTHLEAVSPLSTLARGYSVTTAMDGNVLKQTKQVKAGDL 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512 + DG + V K+ KK Sbjct: 429 LTTRLSDGWVESEVKGVTTAKKTRRKKP 456 >gi|156932950|ref|YP_001436866.1| exodeoxyribonuclease VII large subunit [Cronobacter sakazakii ATCC BAA-894] gi|166232355|sp|A7MGV1|EX7L_ENTS8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|156531204|gb|ABU76030.1| hypothetical protein ESA_00753 [Cronobacter sakazakii ATCC BAA-894] Length = 457 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 143/512 (27%), Positives = 236/512 (46%), Gaps = 61/512 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P +Q S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ + Sbjct: 2 PLTQTPS----IFTVSRLNQSVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTA 56 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ Sbjct: 57 QVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQRYEQ 116 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K++L EGLF K P+P + + VITS TGA + D+L + R P L V+I+P V Sbjct: 117 LKQQLAAEGLFDPALKKPLPSPARQVGVITSKTGAALHDVLNVLRRRDPSLPVVIYPTAV 176 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD+ P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S I Sbjct: 177 QGDDAPAQIVRAIELANLRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRI 230 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 PI+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L + L+ RL + + Sbjct: 231 PIVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQVQALQQRLEMAMDYSLA 290 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L L +R + RL + +++ L+ + + ++ R+ Sbjct: 291 NRQQRFTRLHHRLEQQHPQLRLARQQTLLMRLRQRMDNALDSRMRHATQRQTRLMQRLNQ 350 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + + + + + + QI Sbjct: 351 QQPLPRLHRASARVQQLEYRLGQI------------------------------------ 374 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ ++ L++ + TL RGY+ + N + + + Sbjct: 375 -----------VAARLSHTRERFGNAITHLEAVSPLATLARGYSVTTAQDGNVLKATKQV 423 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V P K+ KK Sbjct: 424 RPGDTLTTRLADGWVESEVRQITPAKKTRKKK 455 >gi|52424615|ref|YP_087752.1| exodeoxyribonuclease VII large subunit [Mannheimia succiniciproducens MBEL55E] gi|52306667|gb|AAU37167.1| XseA protein [Mannheimia succiniciproducens MBEL55E] Length = 440 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 149/493 (30%), Positives = 234/493 (47%), Gaps = 57/493 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 ++ YSVS+L+Y ++ ++E L V + GEIS + SGH Y +LKD ++++ ++ Sbjct: 2 MNENIYSVSQLNYSVRQLLEGQLGLVWLTGEISNF-SQPVSGHWYLTLKDENAQVRCAMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+IIES+ P+G G L E K KL Sbjct: 61 RMKNMRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIESMHPAGEGFLQQQFEALKIKLAA 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + ++TSPTGA ++DIL + R P L++II+P VQG + Sbjct: 121 EGLFAQNLKKNLPHFAKTVGIVTSPTGAALQDILNILQRRDPSLKIIIYPTAVQGKDAAN 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N E D++I+ RGGGS+EDLW FN+E + RAI SSIP+ISA+G Sbjct: 181 EIVQMIELANLRNEA------DVLIVGRGGGSLEDLWCFNEETVARAIFRSSIPVISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ AD+RAPTP+ AAE+ ++ L L RL + RL K L Sbjct: 235 HETDVTIADFVADVRAPTPSAAAELVSRNQQELFQQLQYKRQRLEMALDRLFNEKQQHLQ 294 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L R + +L L + ++ + + + R++ + L + + Sbjct: 295 RFLLRLQNRHPSARLLAQRQQTGQLEHRLNSAIRRLLDKNHYKLTALCERLEKNPLPYLV 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ HI++ T Sbjct: 355 RQQNYHIVQLA-----------------------------------------------TN 367 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++F L I S TS+S L + L RGY+ + I+ + T +I Sbjct: 368 LDFALKRLIVSKQTSLSALCGKLDGLSPLKVLARGYSIAETEQGETISSVNQVETGDKIK 427 Query: 487 INFFDGQANAIVI 499 DG + VI Sbjct: 428 TRLRDGVIVSKVI 440 >gi|300920664|ref|ZP_07137075.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 115-1] gi|300412345|gb|EFJ95655.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 115-1] Length = 456 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIYHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|157144558|ref|YP_001451877.1| exodeoxyribonuclease VII large subunit [Citrobacter koseri ATCC BAA-895] gi|166232350|sp|A8AD78|EX7L_CITK8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157081763|gb|ABV11441.1| hypothetical protein CKO_00278 [Citrobacter koseri ATCC BAA-895] Length = 457 Score = 384 bits (986), Expect = e-104, Method: Composition-based stats. Identities = 146/507 (28%), Positives = 234/507 (46%), Gaps = 57/507 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSTIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQIIIES+ P+G G L E K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIIESMQPAGEGLLQQKYELLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI + N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIERANARNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRNRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + L+ + R ++ R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTMLERLRQRMNFALDNQLKRAASRQQRVLQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIYRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ + L++ + +TL RGY+ T+ + Q R + Sbjct: 374 -----NVRARLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTRQVKAGDV 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V K+ KK Sbjct: 429 LTTRLSDGWVESEVKGVTTAKKTRRKK 455 >gi|332754196|gb|EGJ84564.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 4343-70] Length = 456 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 148/506 (29%), Positives = 236/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + T Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|161502331|ref|YP_001569443.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189037843|sp|A9MHM3|EX7L_SALAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|160863678|gb|ABX20301.1| hypothetical protein SARI_00364 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 454 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 145/502 (28%), Positives = 234/502 (46%), Gaps = 57/502 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K+P+P + VITS TGA + DIL + R P L VII+P VQG++ Sbjct: 122 QAEGLFDQQYKHPLPSPAYCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGEDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N KE D++I+ RGGGS+EDLW FNDE + RAI S+IP++SA Sbjct: 182 PGQIVRAITLANARKE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASTIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQTACQRLEMAMDYYLANRQRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L L +R + +RL + + LE + + + R++ Sbjct: 296 FSQLYHRLQQQHPQLRLARQQTTLERLRQRMHLALENQLKQANQRQQRASQRLRQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ T L++ + TL RGY+ T+ N + + + L Sbjct: 374 -----NFRARLSEQRERFGNTVTHLEAVSPLATLARGYSVSTATDGNVLKKVKQLKVGDM 428 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + DG + V P K+ Sbjct: 429 MTTRLKDGWVTSEVTAIKPVKK 450 >gi|302382957|ref|YP_003818780.1| exodeoxyribonuclease VII large subunit [Brevundimonas subvibrioides ATCC 15264] gi|302193585|gb|ADL01157.1| exodeoxyribonuclease VII, large subunit [Brevundimonas subvibrioides ATCC 15264] Length = 529 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 184/526 (34%), Positives = 274/526 (52%), Gaps = 12/526 (2%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 ++P S+SELS+ LK +E HV +RGEIS H+SGH Y +LKD+ S I Sbjct: 15 PAPARDNNPPLSISELSFALKRTLEDRFGHVRLRGEISKVN-RHASGHIYLTLKDDKSAI 73 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 D ++WKG+ + PE G+E +V GKIT++P S YQI+IES+ +G+G LL LE+ K Sbjct: 74 DGVVWKGSARGLGVQPETGLEVIVTGKITSYPARSSYQIVIESMEAAGAGALLAQLERLK 133 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 +L EGLF K IP P+ I VITSPTGAVIRDIL RI+ R+P VI++PV VQGD Sbjct: 134 VRLSGEGLFDPARKRSIPLYPRTIGVITSPTGAVIRDILHRIAERWPCHVIVWPVVVQGD 193 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ AI + + G PRPD++I+ARGGGS+EDLW FNDE + R +A ++IPII Sbjct: 194 AACGQVGAAIRGFDAMTPGGPIPRPDLLIVARGGGSVEDLWCFNDEGLARTVAAATIPII 253 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD TL D+ +D RAPTPTGAAE+A PV L++++ +LE RL+ RL++ + Sbjct: 254 SAVGHETDTTLIDFVSDRRAPTPTGAAEIATPVLADLRAAVTDLERRLDRAGARLLEDRR 313 Query: 305 NTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L ++ + LP + ++ ++ RLD L L + +R + R L Sbjct: 314 VRLRAVARGLPARPEDLIALAQQRLDHAASRLGSGLGRNVELHHRRLVGVAGRFSPRLLD 373 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +++ + + + E++ + ++R+ + Sbjct: 374 RAVEQRTARLDGLGSRLVAAL--GANAARHERRLLQVSGRLTPAPLRHRLEQRSDRLTAT 431 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + R++ I ++ R L + + K G+ I D I L+ Sbjct: 432 VARLDRARPQAILRASDRLAALARALATLDPRRP-KPGFARIDDETGKMIASAAALSPGQ 490 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 R+ +NF DG A + P + R QG LF Sbjct: 491 RVSLNFADGSQGATIDG-------PASAPRPPGKPRTAPVDQGSLF 529 >gi|157161984|ref|YP_001459302.1| exodeoxyribonuclease VII large subunit [Escherichia coli HS] gi|170019208|ref|YP_001724162.1| exodeoxyribonuclease VII large subunit [Escherichia coli ATCC 8739] gi|312973250|ref|ZP_07787422.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1827-70] gi|166919632|sp|A8A315|EX7L_ECOHS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|189037847|sp|B1IWF2|EX7L_ECOLC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157067664|gb|ABV06919.1| exodeoxyribonuclease VII, large subunit [Escherichia coli HS] gi|169754136|gb|ACA76835.1| exodeoxyribonuclease VII, large subunit [Escherichia coli ATCC 8739] gi|310331845|gb|EFP99080.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1827-70] gi|323941229|gb|EGB37414.1| exodeoxyribonuclease VII [Escherichia coli E482] Length = 456 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLKKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|254473566|ref|ZP_05086962.1| exodeoxyribonuclease VII, large subunit [Pseudovibrio sp. JE062] gi|211957278|gb|EEA92482.1| exodeoxyribonuclease VII, large subunit [Pseudovibrio sp. JE062] Length = 510 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 189/554 (34%), Positives = 284/554 (51%), Gaps = 82/554 (14%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + EY+VSE+S +K +E ++ VRGE+ G +SGH Y +KD+ + + IIW Sbjct: 5 SNIAEYTVSEISGDIKRELEDKFGYIRVRGEL-GRVSRPASGHIYLDVKDDKAVLSGIIW 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++++ PE+G+E + GKITTFPG SKYQ++I+SL P+G+G L+ LE+RK+KL Sbjct: 64 RGNASRLKVQPEQGLEVIATGKITTFPGQSKYQMVIDSLEPAGAGALMALLEERKRKLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189 EGLF+++ K +P +P++I V+TSPTGAVIRDIL RIS RFPL V+++PV+VQG+ C E Sbjct: 124 EGLFAEERKVALPRMPRVIGVVTSPTGAVIRDILHRISDRFPLHVLVWPVRVQGETCGSE 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A I N L+ G PRPD++I+ARGGGSIEDLW FNDE +VRA A+S IP+ISA+GH Sbjct: 184 VAAGIRGFNALEAGGAIPRPDVLIVARGGGSIEDLWGFNDEAVVRAAADSQIPLISAVGH 243 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETDWTL D AAD+RAPTPTGAAE AVPVK + + + +L RL+ ++RL++ + L + Sbjct: 244 ETDWTLIDLAADVRAPTPTGAAEFAVPVKAEMTAQVDDLSRRLSTGLLRLVQSRRTELRA 303 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 ALP L+ R R D + LEH L++ + + ++ L + + Sbjct: 304 ASAALPAPRDLLALPRQRFDMVAGRLEHGLKMNTQIHRNSLTAVSSGLRPITLERQVAQG 363 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R+ + + ++ Sbjct: 364 RERLQVLKVRATTAFSNQVQRQ-------------------------------------- 385 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +S + +L S +Y+ ++RGY ++D N + + + + + Sbjct: 386 ---------RLRLSNSAGLLGSLSYERVIERGYAVVRDENGIPLASAQAVQAGQALKLEM 436 Query: 490 FDGQANAIVINK------------------------APPKE----------QPTKKCQLH 515 G A+ +PPK + KK Sbjct: 437 KGGTVGAVADGGGVTPTPPRVAIPTPTEAAEPSAPTSPPKSLEEHMAQTKAKQAKKPARK 496 Query: 516 NNKREKQGTQGELF 529 QG LF Sbjct: 497 KKSVVDPDAQGSLF 510 >gi|94496131|ref|ZP_01302709.1| exodeoxyribonuclease VII large subunit [Sphingomonas sp. SKA58] gi|94424310|gb|EAT09333.1| exodeoxyribonuclease VII large subunit [Sphingomonas sp. SKA58] Length = 493 Score = 384 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 182/527 (34%), Positives = 269/527 (51%), Gaps = 51/527 (9%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + P SVSELS LK VE HV +RGEISG++ +SGH Y LKD+++ Sbjct: 16 AEDRAGDNAPPLSVSELSGMLKRTVEDRFGHVRLRGEISGFK-RAASGHLYLCLKDDNAV 74 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID ++WKG ++ F P++G+E + GK+TT+PG SKYQI+IE + +G G L+ LEK Sbjct: 75 IDGVMWKGGAQRLAFAPQDGVEVIATGKLTTYPGRSKYQIVIERMELAGEGALMALLEKL 134 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K KL EGLF+ + K P+PF+P+ I V+TSPTGAVIRDIL R++ R P +V+++PV VQG Sbjct: 135 KAKLAGEGLFAPERKKPLPFLPRTIGVVTSPTGAVIRDILHRLADRCPTQVLLWPVLVQG 194 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +++A A+ + + PRP+++I+ARGGGSIEDLW FN+E++VRA+A SIPI Sbjct: 195 QGAAEQVARAVRGFSEMAGDGALPRPELVIVARGGGSIEDLWSFNEEIVVRAVAECSIPI 254 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL DYAAD RAPTPT AAEMAVPV+ L + L ++ R + R Sbjct: 255 ISAVGHETDTTLCDYAADRRAPTPTAAAEMAVPVRAELLAGLTDMGLRAGRAVRRGAAQA 314 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ + +P D LS R RLD++ L L + H ++ L Sbjct: 315 RERLDMQARLMPTPDTLLSPQRQRLDQVSDGLASGLRHRLADARAHLGQASGALRPALLR 374 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + + E +V Sbjct: 375 QQLARAGERLDRLRLRPENLV--------------------------------------- 395 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R + + + L+RGY + + + Sbjct: 396 --RAQRDCATAFDRVSRHFAS-------LNPDLPLQRGYARVM-AGDRLVRSVEAARAAG 445 Query: 484 RILINFFDGQANAIVIN-KAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +++++F DG +A V +AP P+ + R+ Q +LF Sbjct: 446 QVVLHFHDGTVDAAVGQAEAPAGMAPSPSARPTRKPRDPAHAQQDLF 492 >gi|333016127|gb|EGK35459.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-227] Length = 456 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELSNQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|293415774|ref|ZP_06658417.1| exodeoxyribonuclease VII [Escherichia coli B185] gi|291433422|gb|EFF06401.1| exodeoxyribonuclease VII [Escherichia coli B185] Length = 456 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|333000697|gb|EGK20273.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri VA-6] Length = 456 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|307252394|ref|ZP_07534290.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859986|gb|EFM92003.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 517 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 33 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 92 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 151 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 152 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLR PTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 266 TDVTIADFVADLRVPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 326 KLRLNAQHPARQVQVQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYYVEKKNQQYAQLAQRLQ 443 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + +NL T+I Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTKNLKVGTQITTK 503 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 504 LSQGEIVSEIIKIN 517 >gi|209919986|ref|YP_002294070.1| exodeoxyribonuclease VII large subunit [Escherichia coli SE11] gi|307312496|ref|ZP_07592129.1| exodeoxyribonuclease VII, large subunit [Escherichia coli W] gi|226694841|sp|B6I581|EX7L_ECOSE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|209913245|dbj|BAG78319.1| exonuclease VII large subunit [Escherichia coli SE11] gi|306907419|gb|EFN37923.1| exodeoxyribonuclease VII, large subunit [Escherichia coli W] gi|315061828|gb|ADT76155.1| exonuclease VII, large subunit [Escherichia coli W] gi|323377591|gb|ADX49859.1| exodeoxyribonuclease VII, large subunit [Escherichia coli KO11] gi|324020069|gb|EGB89288.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 117-3] Length = 456 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|156973388|ref|YP_001444295.1| exodeoxyribonuclease VII large subunit [Vibrio harveyi ATCC BAA-1116] gi|166232371|sp|A7MU31|EX7L_VIBHB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|156524982|gb|ABU70068.1| hypothetical protein VIBHAR_01075 [Vibrio harveyi ATCC BAA-1116] Length = 443 Score = 383 bits (984), Expect = e-104, Method: Composition-based stats. Identities = 139/494 (28%), Positives = 240/494 (48%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 3 SQTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++G ++ F P G + LV +++ + YQ+IIES+ P G G L E K KL Sbjct: 62 MFRGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEALKMKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ +K P+P PK + VITS TGA + DIL + R P L V+++P VQG+E Sbjct: 122 AAEGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEEA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++A AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA Sbjct: 182 AIQMAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D T+AD+ AD+RAPTP+ AAE+ H +L+ + +L + + + + Sbjct: 236 VGHEVDVTIADFVADIRAPTPSAAAELVSRDNSHKDQALVTHQHKLASAMRYYLAQQKQQ 295 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ L + L +LD L L+ ++ I + + +R++ + + Sbjct: 296 SAQLMHRLERQHPSYQLQRQTQQLDELEMRLQRAMQRFITTRQQAVERKHHRLQLNSPVK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + + + +Q Sbjct: 356 RLAEQKSKLDRVEQ---------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + K+ + ++I L + + TLKRGY+ Q +TQ +++ T Sbjct: 370 -KLLDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQVVTQAKDVKTGDV 428 Query: 485 ILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 429 LVTRLSDGELRSTV 442 >gi|307247801|ref|ZP_07529837.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306855603|gb|EFM87770.1| Exodeoxyribonuclease 7 large subunit [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 517 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 33 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 91 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL G Sbjct: 92 KNQRVIFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAASG 151 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 152 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 211 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 212 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 265 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 266 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 325 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 326 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 385 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 386 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 443 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 444 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 503 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 504 LSQGEIVSEIIKIN 517 >gi|110806440|ref|YP_689960.1| exodeoxyribonuclease VII large subunit [Shigella flexneri 5 str. 8401] gi|123048016|sp|Q0T210|EX7L_SHIF8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|110615988|gb|ABF04655.1| exonuclease VII, large subunit [Shigella flexneri 5 str. 8401] Length = 456 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSSRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|229505620|ref|ZP_04395130.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae BX 330286] gi|229517830|ref|ZP_04407274.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC9] gi|229344545|gb|EEO09519.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC9] gi|229357843|gb|EEO22760.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae BX 330286] Length = 464 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 57/491 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 25 NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F P+ G + LV +++ + YQII+ES+ P G G L E+ K +L E Sbjct: 84 GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+E + Sbjct: 144 GLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFAR 317 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + +LD L LE ++ + + + ++ + ++I+ IH I+ Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R ++++++Q I Q Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + +++ + L + + TL RGY+ + T + Q + ++ Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450 Query: 488 NFFDGQANAIV 498 DG+ + V Sbjct: 451 QLMDGEILSTV 461 >gi|254228660|ref|ZP_04922084.1| exodeoxyribonuclease VII, large subunit [Vibrio sp. Ex25] gi|151938839|gb|EDN57673.1| exodeoxyribonuclease VII, large subunit [Vibrio sp. Ex25] Length = 496 Score = 383 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 139/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 58 TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 116 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P G + LV +++ + YQ+IIES+ P G G L E+ K KL Sbjct: 117 RGNNRRVTFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 176 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K P+P PK + VITS TGA + DIL + R P L V+I+P VQG++ Sbjct: 177 EGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 236 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 237 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 290 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H +L+ + +L + + + + Sbjct: 291 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 350 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ L + L +LD L L+ + I + + R++ + + + Sbjct: 351 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRAMSRFIALRQQRIERQHYRLQLNSPVTRL 410 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + +Q + Sbjct: 411 AEQKSKLERVEQKL---------------------------------------------- 424 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + K+ + ++I L + + TLKRGY+ Q ITQ ++ + ++ Sbjct: 425 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 483 Query: 487 INFFDGQANAIV 498 +G + V Sbjct: 484 TRLAEGDVRSTV 495 >gi|30063901|ref|NP_838072.1| exodeoxyribonuclease VII large subunit [Shigella flexneri 2a str. 2457T] gi|56480122|ref|NP_708348.2| exodeoxyribonuclease VII large subunit [Shigella flexneri 2a str. 301] gi|81839397|sp|Q83QL0|EX7L_SHIFL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|30042156|gb|AAP17882.1| exonuclease VII, large subunit [Shigella flexneri 2a str. 2457T] gi|56383673|gb|AAN44055.2| exonuclease VII, large subunit [Shigella flexneri 2a str. 301] gi|281601911|gb|ADA74895.1| Exodeoxyribonuclease 7 large subunit [Shigella flexneri 2002017] gi|332755559|gb|EGJ85923.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-671] gi|332756205|gb|EGJ86556.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 2747-71] gi|332766342|gb|EGJ96552.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 2930-71] Length = 456 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 147/506 (29%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 E LF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + T Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|300951786|ref|ZP_07165601.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 116-1] gi|300958861|ref|ZP_07170969.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 175-1] gi|300314513|gb|EFJ64297.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 175-1] gi|300448983|gb|EFK12603.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 116-1] Length = 456 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWGFNDERVARAIFTSRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|261340809|ref|ZP_05968667.1| exodeoxyribonuclease VII, large subunit [Enterobacter cancerogenus ATCC 35316] gi|288317235|gb|EFC56173.1| exodeoxyribonuclease VII, large subunit [Enterobacter cancerogenus ATCC 35316] Length = 457 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 146/507 (28%), Positives = 233/507 (45%), Gaps = 57/507 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+ +++ Sbjct: 3 SSQSPSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 SAEGLFDQQFKKALPTPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI + N +E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIERANARQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASVIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ + L L N + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQLELLRQLQNGQQRLEMAMDYFLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + L+ + R + R+ Sbjct: 296 FTQLYHRLQQQHPQLRLARQQTVLERLRQRMNVALDGQLKRAASRQQRMAQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIYRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ + L++ + +TL RGY+ T+ + Q + + Sbjct: 374 -----NVRARLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKQTKQIKAGDV 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V P K+ +K Sbjct: 429 LTTRLSDGWVESEVKAIKPVKKTRQRK 455 >gi|320200073|gb|EFW74662.1| Exodeoxyribonuclease VII large subunit [Escherichia coli EC4100B] Length = 456 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|331664069|ref|ZP_08364979.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA143] gi|284922456|emb|CBG35543.1| exodeoxyribonuclease 7 large subunit [Escherichia coli 042] gi|331059868|gb|EGI31845.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA143] Length = 458 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 142/510 (27%), Positives = 231/510 (45%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKPRKKAANP 458 >gi|154245360|ref|YP_001416318.1| exodeoxyribonuclease VII large subunit [Xanthobacter autotrophicus Py2] gi|154159445|gb|ABS66661.1| exodeoxyribonuclease VII, large subunit [Xanthobacter autotrophicus Py2] Length = 496 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 193/525 (36%), Positives = 281/525 (53%), Gaps = 48/525 (9%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + PE+SVSELS L+ VE HV VRGEISGYRG H SGHAYFSLKD +R+D Sbjct: 17 AEPRANAPEWSVSELSAALRRTVEDAYGHVRVRGEISGYRGPHGSGHAYFSLKDAGARLD 76 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 A+IWKGT ++ PEEG+E + IG++TT+PG S YQI+IE+L +G+G ++ LE+RK+ Sbjct: 77 AVIWKGTFQRLRLKPEEGLEVVAIGRLTTYPGKSGYQIVIEALEFAGAGAIMAMLEERKR 136 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 +L EGLF K +PF+P++I V+TSPTGAVIRDIL R+ RFP RV+++PV+VQG+ Sbjct: 137 RLSAEGLFDPARKVALPFLPQVIGVVTSPTGAVIRDILHRLDDRFPRRVLVWPVRVQGET 196 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E+A AI N L G PRPD+I++ARGGG++EDL F+DE +VRA A S+IP+++ Sbjct: 197 SAAEVAAAIRGFNALPAGGAIPRPDVIVVARGGGALEDLLGFSDEEVVRAAAESAIPLVA 256 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TL D+AAD+RAPTPT AAEM VPV+ L +++ +L RL +RL++ + Sbjct: 257 AVGHETDVTLIDFAADVRAPTPTAAAEMVVPVRSELIAAVEDLGGRLAAAPVRLLERRRA 316 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L + LP+++ LS R RLD L L+ R+ + L Sbjct: 317 DLRGLSRLLPSAENLLSVPRQRLDAASERLPRALKANAAAHRLRLVAARARLSPEALRLR 376 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ + +++ Sbjct: 377 LERAGDRLETLDGRLKRAFSVAREQRA--------------------------------A 404 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ ++L + ++K L RG+ ++D + L T + Sbjct: 405 RLRSA---------------GQLLDALSFKGVLSRGFALVRDAQGQPVRLAAGLTAGTAL 449 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQG-ELF 529 + F DG A+ + P R+ +G LF Sbjct: 450 DLEFADGHVAAVTGDVVPAATPAAPARPRPAKSRKPPKVEGPTLF 494 >gi|323170220|gb|EFZ55873.1| exodeoxyribonuclease VII, large subunit [Escherichia coli LT-68] Length = 456 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRTQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|323499813|ref|ZP_08104772.1| exodeoxyribonuclease VII large subunit [Vibrio sinaloensis DSM 21326] gi|323315054|gb|EGA68106.1| exodeoxyribonuclease VII large subunit [Vibrio sinaloensis DSM 21326] Length = 443 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 141/495 (28%), Positives = 240/495 (48%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSLTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +++ + YQ+IIES+ P G G L ++ K K Sbjct: 61 AMFRGNNRRVSFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDELKMK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ +K P+P PK + VITS TGA + DIL + R P L V+I+P VQG+E Sbjct: 121 LAGEGLFAQTNKRPLPEHPKRVGVITSKTGAALLDILDVLKRRDPSLPVVIYPTMVQGEE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI N+ E D++I+ RGGGS+EDLW FN+E++ R IA+S IPIIS Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIASSQIPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ AD+RAPTP+ AAE+ H + + +L + I + + Sbjct: 235 AVGHEIDVTIADFVADMRAPTPSAAAELVSRDNSHKAQTFQARQHKLLSAIRYYLAEQKQ 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L+ L + L +LD L L+ ++ +I + + +R++ + Sbjct: 295 HASQLMHRLERQHPSYQLQRQSQQLDELDMRLQRAMKQLITTRQQSVERKHHRLQLASPV 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + R + +Q Sbjct: 355 TRLAEQRSKLDRAEQ--------------------------------------------- 369 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ + K+ + ++I L + + TLKRGY+ Q +TQ ++ T Sbjct: 370 --KLMDAMDRKLLTARHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQVVTQATDVKTGD 427 Query: 484 RILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 TLVTRLADGELRSTV 442 >gi|90416233|ref|ZP_01224165.1| exodeoxyribonuclease VII large subunit [marine gamma proteobacterium HTCC2207] gi|90331958|gb|EAS47172.1| exodeoxyribonuclease VII large subunit [marine gamma proteobacterium HTCC2207] Length = 449 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 147/503 (29%), Positives = 239/503 (47%), Gaps = 59/503 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MNP N + +SVS+L+ ++H++E+ L + V GEIS + +SGH Y +LKD+ Sbjct: 1 MNP----NPSERQVFSVSQLNRSVRHLIETQLPLLWVEGEISNF-ARPASGHWYLTLKDD 55 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ ++ F P G + LV + + G +YQ++IE + +G G L Sbjct: 56 QAQVRCAMFRNANQRVGFKPANGTQVLVRCRAGLYEGRGEYQLVIEHMEEAGFGALQRQF 115 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K+KL +EGLF +QHK P+P I VITS TGA ++D+L ++ RFP ++V IFP Sbjct: 116 EQLKQKLSDEGLFDNQHKRPMPDSVSHIGVITSATGAAVKDVLSVLARRFPSIKVSIFPT 175 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG++ K+I AI N L + D +I+ RGGGS+EDLW FN+E++ RAI S Sbjct: 176 AVQGEQAAKQIVEAINNANQLGQ------CDALIVGRGGGSLEDLWPFNEEVVARAIFAS 229 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IPI+SA+GHE D+T+AD+ ADLRAPTP+ AAE+ P E + + E L + R Sbjct: 230 AIPIVSAVGHEVDFTIADFVADLRAPTPSAAAELLSPDGEDILNQFEGFEILLTEAVGRK 289 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 I L K L + L LD L L ++ + ++ + N + ++ Sbjct: 290 ISQLRQRTEYLKKRLRHPGHKLQEQSQHLDHLDIRLRRAIDNKLEQRRQQINRVQAQLAR 349 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 I Q + + + + Sbjct: 350 VHPGEAIGDYHQLVARYVKQMSR------------------------------------- 372 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + +++ + +L + + TL RGY+ I+DT+N + +L Sbjct: 373 ----------TVRQQLEVRRSKTGQAMHLLDTVSPLKTLGRGYSIIRDTDNAVVKSVASL 422 Query: 480 ATKTRILINFFDGQANAIVINKA 502 + DG+ V Sbjct: 423 NKGDMLRGQLEDGEVILAVTGTN 445 >gi|229523412|ref|ZP_04412819.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TM 11079-80] gi|229339775|gb|EEO04790.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TM 11079-80] Length = 464 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 143/491 (29%), Positives = 241/491 (49%), Gaps = 57/491 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 25 NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F P+ G + LV +++ + YQII+ES+ P G G L E+ K +L E Sbjct: 84 GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+E + Sbjct: 144 GLFAQTRKKPLPDNPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + +LD L LE ++ + + + ++ + ++I+ IH I+ Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R ++++++Q I Q Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + +++ + L + + TL RGY+ + + Q + ++ Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTAQGELVRQSAQVKPGDTLVT 450 Query: 488 NFFDGQANAIV 498 DG+ + V Sbjct: 451 QLMDGEILSTV 461 >gi|229530104|ref|ZP_04419494.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae 12129(1)] gi|229333878|gb|EEN99364.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae 12129(1)] Length = 464 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 57/491 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 25 NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F P+ G + LV +++ + YQII+ES+ P G G L E+ K +L E Sbjct: 84 GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+E + Sbjct: 144 GLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + +LD L LE ++ + + + ++ + ++I+ IH I+ Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R ++++++Q I Q Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + +++ + L + + TL RGY+ + T + Q + ++ Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450 Query: 488 NFFDGQANAIV 498 DG+ + V Sbjct: 451 QLMDGEILSTV 461 >gi|74313035|ref|YP_311454.1| exodeoxyribonuclease VII large subunit [Shigella sonnei Ss046] gi|187731397|ref|YP_001881300.1| exodeoxyribonuclease VII large subunit [Shigella boydii CDC 3083-94] gi|191167680|ref|ZP_03029489.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B7A] gi|193068370|ref|ZP_03049333.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E110019] gi|218555034|ref|YP_002387947.1| exodeoxyribonuclease VII large subunit [Escherichia coli IAI1] gi|218696136|ref|YP_002403803.1| exodeoxyribonuclease VII large subunit [Escherichia coli 55989] gi|256017343|ref|ZP_05431208.1| exodeoxyribonuclease VII large subunit [Shigella sp. D9] gi|293446862|ref|ZP_06663284.1| exodeoxyribonuclease VII [Escherichia coli B088] gi|300817721|ref|ZP_07097936.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 107-1] gi|300820821|ref|ZP_07100971.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 119-7] gi|300903525|ref|ZP_07121448.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 84-1] gi|300927128|ref|ZP_07142876.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 182-1] gi|301302866|ref|ZP_07208994.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 124-1] gi|301330400|ref|ZP_07223042.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 78-1] gi|309794444|ref|ZP_07688867.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 145-7] gi|331678500|ref|ZP_08379175.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H591] gi|332278338|ref|ZP_08390751.1| exonuclease VII large subunit [Shigella sp. D9] gi|123745956|sp|Q3YZ43|EX7L_SHISS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694650|sp|B7M7L3|EX7L_ECO8A RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697609|sp|B2TXT4|EX7L_SHIB3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783700|sp|B7LCP9|EX7L_ECO55 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|73856512|gb|AAZ89219.1| exonuclease VII, large subunit [Shigella sonnei Ss046] gi|187428389|gb|ACD07663.1| exodeoxyribonuclease VII, large subunit [Shigella boydii CDC 3083-94] gi|190902279|gb|EDV62019.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B7A] gi|192958322|gb|EDV88762.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E110019] gi|218352868|emb|CAU98667.1| exonuclease VII, large subunit [Escherichia coli 55989] gi|218361802|emb|CAQ99401.1| exonuclease VII, large subunit [Escherichia coli IAI1] gi|291323692|gb|EFE63120.1| exodeoxyribonuclease VII [Escherichia coli B088] gi|300404460|gb|EFJ87998.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 84-1] gi|300416898|gb|EFK00209.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 182-1] gi|300526574|gb|EFK47643.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 119-7] gi|300529709|gb|EFK50771.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 107-1] gi|300841801|gb|EFK69561.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 124-1] gi|300843629|gb|EFK71389.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 78-1] gi|308121900|gb|EFO59162.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 145-7] gi|315256529|gb|EFU36497.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 85-1] gi|320175072|gb|EFW50185.1| Exodeoxyribonuclease VII large subunit [Shigella dysenteriae CDC 74-1112] gi|320185209|gb|EFW59989.1| Exodeoxyribonuclease VII large subunit [Shigella flexneri CDC 796-83] gi|323169047|gb|EFZ54724.1| exodeoxyribonuclease VII, large subunit [Shigella sonnei 53G] gi|323184430|gb|EFZ69805.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1357] gi|323944731|gb|EGB40798.1| exodeoxyribonuclease VII [Escherichia coli H120] gi|324118147|gb|EGC12044.1| exodeoxyribonuclease VII [Escherichia coli E1167] gi|331074960|gb|EGI46280.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H591] gi|332092786|gb|EGI97855.1| exodeoxyribonuclease VII, large subunit [Shigella boydii 3594-74] gi|332100690|gb|EGJ04036.1| exonuclease VII large subunit [Shigella sp. D9] Length = 456 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|15640785|ref|NP_230415.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585732|ref|ZP_01675527.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 2740-80] gi|121725972|ref|ZP_01679271.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V52] gi|153817270|ref|ZP_01969937.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae NCTC 8457] gi|227080945|ref|YP_002809496.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae M66-2] gi|254847903|ref|ZP_05237253.1| exodeoxyribonuclease 7 large subunit [Vibrio cholerae MO10] gi|255744572|ref|ZP_05418523.1| exodeoxyribonuclease VII large subunit [Vibrio cholera CIRS 101] gi|262161293|ref|ZP_06030404.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae INDRE 91/1] gi|298499101|ref|ZP_07008908.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MAK 757] gi|14194729|sp|Q9KTW4|EX7L_VIBCH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783717|sp|C3LT19|EX7L_VIBCM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|9655213|gb|AAF93931.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121550095|gb|EAX60111.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 2740-80] gi|121631454|gb|EAX63824.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V52] gi|126512186|gb|EAZ74780.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae NCTC 8457] gi|227008833|gb|ACP05045.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae M66-2] gi|254843608|gb|EET22022.1| exodeoxyribonuclease 7 large subunit [Vibrio cholerae MO10] gi|255737603|gb|EET92997.1| exodeoxyribonuclease VII large subunit [Vibrio cholera CIRS 101] gi|262029043|gb|EEY47696.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae INDRE 91/1] gi|297543434|gb|EFH79484.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MAK 757] Length = 446 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQE 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|311694943|gb|ADP97816.1| exodeoxyribonuclease VII large subunit [marine bacterium HP15] Length = 462 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 151/509 (29%), Positives = 232/509 (45%), Gaps = 56/509 (11%) Query: 3 PFSQKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P + P SVSEL++ +H++ES+ V V GE+SG SSGH YFSLKD Sbjct: 8 PATPHLQDTRPRALSVSELNHQARHLLESSFMQVWVEGELSGL-SRPSSGHWYFSLKDRK 66 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++ +++G +I P+EG + + GK+T + +QII+E + P+G G L A E Sbjct: 67 CQVRCAMFRGMNQRIRTPPKEGDQVRIRGKVTLYENRGDFQIIVEHVEPAGLGALQQAFE 126 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K+KLL EGLF K P+P +P+ I V+TSPTGA I DIL ++ R P + V ++P Sbjct: 127 ELKRKLLAEGLFEQASKKPLPSLPRHIGVVTSPTGAAIHDILTVLARRCPAIPVTLYPTA 186 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I AI + D++I+ RGGGS+EDLW FN+E + RAIA Sbjct: 187 VQGKAATADIVRAIEA------AQNHGVADVLIIGRGGGSLEDLWCFNEEAVARAIAACR 240 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP +SA+GHE D T+AD+ ADLRAPTP+ AAE P + L + E RL+N + + Sbjct: 241 IPTVSAVGHEVDVTIADFVADLRAPTPSAAAEKISPDQSDWLKQLRDREFRLSNAMGLAL 300 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 K L L L + + L R+D L L + + +H+ R+ Sbjct: 301 KRLGTQLGHLSARLRDPRRELLEKAQRMDELELRLRKAIRQRLTTVGVRNDHLRQRLVMQ 360 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + ++ + + + + + + Sbjct: 361 SPHRQLSDSQDALRRVSERL--------------------------------VSVMQQDL 388 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K+ + + L + TL RGY+ ++D N N + N+ Sbjct: 389 KQRRDNL---------------EHAAQTLNVVSPLATLGRGYSIVRDNNGNILRDASNVN 433 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPT 509 I G+ A V + +E Sbjct: 434 PGDTISARVARGEMTAKVTSVKSAEETGP 462 >gi|16130434|ref|NP_417004.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr. MG1655] gi|89109315|ref|AP_003095.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr. W3110] gi|170082119|ref|YP_001731439.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr. DH10B] gi|194437699|ref|ZP_03069795.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 101-1] gi|238901674|ref|YP_002927470.1| exonuclease VII, large subunit [Escherichia coli BW2952] gi|253772597|ref|YP_003035428.1| exodeoxyribonuclease VII large subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162483|ref|YP_003045591.1| exodeoxyribonuclease VII large subunit [Escherichia coli B str. REL606] gi|256021805|ref|ZP_05435670.1| exodeoxyribonuclease VII large subunit [Escherichia sp. 4_1_40B] gi|300930149|ref|ZP_07145570.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 187-1] gi|301022367|ref|ZP_07186256.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 196-1] gi|301648264|ref|ZP_07248007.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 146-1] gi|307139144|ref|ZP_07498500.1| exodeoxyribonuclease VII large subunit [Escherichia coli H736] gi|331643129|ref|ZP_08344264.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H736] gi|2507019|sp|P04994|EX7L_ECOLI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694651|sp|B1XAY4|EX7L_ECODH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|259646288|sp|C4ZX84|EX7L_ECOBW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|1788856|gb|AAC75562.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr. MG1655] gi|1805569|dbj|BAA16396.1| exonuclease VII, large subunit [Escherichia coli str. K12 substr. W3110] gi|169889954|gb|ACB03661.1| exonuclease VII, large subunit [Escherichia coli str. K-12 substr. DH10B] gi|194423505|gb|EDX39496.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 101-1] gi|238861056|gb|ACR63054.1| exonuclease VII, large subunit [Escherichia coli BW2952] gi|242378107|emb|CAQ32880.1| exonuclease VII, large subunit, subunit of exonuclease VII [Escherichia coli BL21(DE3)] gi|253323641|gb|ACT28243.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974384|gb|ACT40055.1| exodeoxyribonuclease VII large subunit [Escherichia coli B str. REL606] gi|253978551|gb|ACT44221.1| exodeoxyribonuclease VII large subunit [Escherichia coli BL21(DE3)] gi|260448411|gb|ACX38833.1| exodeoxyribonuclease VII, large subunit [Escherichia coli DH1] gi|299881280|gb|EFI89491.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 196-1] gi|300461955|gb|EFK25448.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 187-1] gi|301073651|gb|EFK88457.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 146-1] gi|309702841|emb|CBJ02172.1| exodeoxyribonuclease 7 large subunit [Escherichia coli ETEC H10407] gi|315137133|dbj|BAJ44292.1| exodeoxyribonuclease VII large subunit [Escherichia coli DH1] gi|315615768|gb|EFU96400.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 3431] gi|323936402|gb|EGB32692.1| exodeoxyribonuclease VII [Escherichia coli E1520] gi|323961319|gb|EGB56931.1| exodeoxyribonuclease VII [Escherichia coli H489] gi|331039927|gb|EGI12147.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H736] gi|332344381|gb|AEE57715.1| exodeoxyribonuclease VII, large subunit XseA [Escherichia coli UMNK88] Length = 456 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|330445252|ref|ZP_08308904.1| exodeoxyribonuclease VII, large subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489443|dbj|GAA03401.1| exodeoxyribonuclease VII, large subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 449 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 140/502 (27%), Positives = 237/502 (47%), Gaps = 57/502 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M FS ++ + Y+VS L+ ++ I+E+ + V + GE+S + + SGH YF+LKD+ Sbjct: 1 MTTFSPQSQTNSRIYTVSSLNAQVRLILENEMGVVWLIGELSNF-SMPVSGHWYFTLKDS 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG+ + F P G + LV +++ + YQ+IIES+ P G G L Sbjct: 60 RAQVKCAMFKGSNRHVTFKPGNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K L EGLF+ K +P PK + +ITS TGA + DIL + R P L ++I+P Sbjct: 120 EQLKMSLAAEGLFAQSLKKSLPEQPKRVGIITSKTGAALHDILHVLQRRDPSLPIVIYPT 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ IA AI + N +E D++I+ RGGGS+EDLW FN+E++ R IA S Sbjct: 180 MVQGEGAAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+ H L +L + I Sbjct: 234 QIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQLLDRKRQQLRHAITAY 293 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L L + L+ + LD + + L + I + +H H ++ Sbjct: 294 LSQSLRQTTQLQHRLERQHPQLRLNLQQQHLDEISQRLTQAMAKKIQKHQKHVEHNNYKL 353 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 ++ +Q++ +Q Sbjct: 354 SLYSPASLVRNAQQNLERSEQR-------------------------------------- 375 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L K+ + +++ L++ + TL RGY+ ++ + I + Sbjct: 376 ---------LYDALDRKLLNARHKLAVAAEKLETVSPLATLARGYSITRNEQGDVIRKAS 426 Query: 478 NLATKTRILINFFDGQANAIVI 499 + ++ DG+ ++ VI Sbjct: 427 QVKAGDTLITTVTDGEIHSSVI 448 >gi|283786123|ref|YP_003365988.1| exodeoxyribonuclease 7 large subunit [Citrobacter rodentium ICC168] gi|282949577|emb|CBG89195.1| exodeoxyribonuclease 7 large subunit [Citrobacter rodentium ICC168] Length = 457 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 145/508 (28%), Positives = 236/508 (46%), Gaps = 57/508 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S + ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSPNSTIFTVSRLNQTVRLLLEQEMGQVWISGEISNF-SQPASGHWYFTLKDDAAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRASITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DILQ + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILQVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANRRSE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ DLRAPTP+ AAEM ++ L + +++ RL + + + Sbjct: 236 VGHETDVTIADFVGDLRAPTPSAAAEMVSRNQQELLRQIQSVQQRLGMAMDYFLASRHRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + DRL + L ++ + R + ++ R+ Sbjct: 296 FTQLHHRLQQQHPQLRLARQQTALDRLRQRLNVAIDSQLKRTNQRQLRLLQRLNHHHPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ + L++ + +TL RGY+ T+ + + + Sbjct: 374 -----NIRARLSATRERFGNAVTHLEAVSPLSTLARGYSVSTATDGKILKKVNQVKAGDV 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512 + DG + V K+ +K Sbjct: 429 MTTRLADGWVESEVTAVKAAKKSRQRKS 456 >gi|170679853|ref|YP_001744694.1| exodeoxyribonuclease VII large subunit [Escherichia coli SMS-3-5] gi|226694873|sp|B1LNG1|EX7L_ECOSM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|170517571|gb|ACB15749.1| exodeoxyribonuclease VII, large subunit [Escherichia coli SMS-3-5] Length = 455 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 143/507 (28%), Positives = 231/507 (45%), Gaps = 57/507 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+KN +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKNSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R +H + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQHQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKA 455 >gi|262402849|ref|ZP_06079410.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC586] gi|262351631|gb|EEZ00764.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC586] Length = 446 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 140/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K +P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKALPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + +IA AI + N E D++I+ RGGGS+EDLW FN E++ R IA S IP+I Sbjct: 181 DAAIQIAQAIGRANARSE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPVI 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASAMRHYLTQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKMQHRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH +++ R H+++++Q I Q Sbjct: 355 IHLVRQQRFHLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + H + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQHYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|168243287|ref|ZP_02668219.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447717|ref|YP_002046572.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|226697604|sp|B4TD84|EX7L_SALHS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|194406021|gb|ACF66240.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|205337649|gb|EDZ24413.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 449 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 HAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|218706010|ref|YP_002413529.1| exodeoxyribonuclease VII large subunit [Escherichia coli UMN026] gi|293405947|ref|ZP_06649939.1| exodeoxyribonuclease 7 large subunit [Escherichia coli FVEC1412] gi|298381749|ref|ZP_06991348.1| exodeoxyribonuclease VII large subunit [Escherichia coli FVEC1302] gi|300898391|ref|ZP_07116734.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 198-1] gi|226694666|sp|B7N693|EX7L_ECOLU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|218433107|emb|CAR14002.1| exonuclease VII, large subunit [Escherichia coli UMN026] gi|291428155|gb|EFF01182.1| exodeoxyribonuclease 7 large subunit [Escherichia coli FVEC1412] gi|298279191|gb|EFI20705.1| exodeoxyribonuclease VII large subunit [Escherichia coli FVEC1302] gi|300357931|gb|EFJ73801.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 198-1] Length = 458 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 142/510 (27%), Positives = 231/510 (45%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLWLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKPRKKAANP 458 >gi|229513095|ref|ZP_04402561.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TMA 21] gi|229349988|gb|EEO14942.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae TMA 21] Length = 464 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 144/491 (29%), Positives = 242/491 (49%), Gaps = 57/491 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 25 NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F P+ G + LV +++ + YQII+ES+ P G G L E+ K +L E Sbjct: 84 GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+E + Sbjct: 144 GLFAQTRKKPLPDNPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + +LD L LE ++ + + + ++ + ++I+ IH I+ Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R ++++++Q I Q Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + +++ + L + + TL RGY+ + T + Q + ++ Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450 Query: 488 NFFDGQANAIV 498 DG+ + V Sbjct: 451 QLMDGEILSTV 461 >gi|153828281|ref|ZP_01980948.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 623-39] gi|148876235|gb|EDL74370.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 623-39] Length = 446 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQRRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|283832115|ref|ZP_06351856.1| exodeoxyribonuclease VII, large subunit [Citrobacter youngae ATCC 29220] gi|291071743|gb|EFE09852.1| exodeoxyribonuclease VII, large subunit [Citrobacter youngae ATCC 29220] Length = 457 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 148/508 (29%), Positives = 233/508 (45%), Gaps = 57/508 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+ +++ Sbjct: 3 SSQTTSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPSSGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P I VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCIGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ DLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVGDLRAPTPSAAAEIVSRNQQELLRQIQSSQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L +R + +RL + + LE I + + ++ R+ Sbjct: 296 FTQLFHRLQQQHPQLRLARQQTTLERLRQRMSTALENQIKQANQRQQRMLQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQSRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ L++ + TL RGY+ TN + + R + Sbjct: 374 -----NIRTRLSVHRERFGNAVTHLEAVSPLATLARGYSVSTATNGGVLKKVRQVKAGDV 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512 + DG + V P K+ +K Sbjct: 429 MTTRLEDGWVESEVTKVTPQKKTRARKA 456 >gi|322514318|ref|ZP_08067372.1| exodeoxyribonuclease VII large subunit [Actinobacillus ureae ATCC 25976] gi|322119786|gb|EFX91818.1| exodeoxyribonuclease VII large subunit [Actinobacillus ureae ATCC 25976] Length = 486 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 2 NNILTITQLNYSVRNLLEMELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 61 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 121 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N E D++I+ RGGGS EDLW FN+E + AI S IPIISA+GHE Sbjct: 181 VNTIDLANRRCE------CDVLIVGRGGGSFEDLWCFNEESVAHAIFRSDIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K + L Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWAEKQASFERL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + H +Q+ Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFNYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQHQLQQ 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q+++Q L + K + + + +L R++ Sbjct: 355 QQMQLKQAEYRLVQVIEQTLIRKQNQWKHIAEQVKH--NPLPYYVEKKNQQYAQLAQRLQ 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + +NL T+I Sbjct: 413 FAIEKKLTKEQQAFQELCTKIDGLSPLKILARGYSVTQTSQGEILRSTKNLEVGTQITTK 472 Query: 489 FFDGQANAIVINKA 502 G+ + ++ Sbjct: 473 LSQGEIVSEIVKIN 486 >gi|188496216|ref|ZP_03003486.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 53638] gi|188491415|gb|EDU66518.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 53638] Length = 456 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 145/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +R + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERQKKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|260776625|ref|ZP_05885520.1| exodeoxyribonuclease VII large subunit [Vibrio coralliilyticus ATCC BAA-450] gi|260607848|gb|EEX34113.1| exodeoxyribonuclease VII large subunit [Vibrio coralliilyticus ATCC BAA-450] Length = 443 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 140/495 (28%), Positives = 241/495 (48%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ + V + GEIS + SGH YF+LKD+ +++ Sbjct: 2 SSLTNQNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYFTLKDSRAQVKC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +++ + YQ+IIES+ P G G L E+ K K Sbjct: 61 AMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFEELKMK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K +P PK + V+TS TGA + DIL + R P L V+I+P VQG++ Sbjct: 121 LAGEGLFAQTSKQTLPEHPKRVGVVTSKTGAALFDILDVLKRRDPSLPVVIYPTLVQGED 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEVVARTIAASQIPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ AD+RAPTP+ AAE+ H ++ + +L++ I + Sbjct: 235 AVGHEIDVTIADFVADMRAPTPSAAAELVSRDNSHKAQAINTRQHKLHSAIRHYLTKHKQ 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 ++L L + L +LD L L+ ++E + + ++ +++ + Sbjct: 295 NTSALQHRLERQHPSHQLQRQSQQLDELSVRLQRSMERYLTTRSQNVERQQYKLQLHSPV 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + Q +EQ + + L + Sbjct: 355 ARLNEQKLSL----QRLEQTLMDAMDRKLLNSR--------------------------- 383 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 +++ T L + + TLKRGY+ QD + +T+ T Sbjct: 384 ----------------HQLALATEKLDTVSPLATLKRGYSITQDASGKVLTKAAETKTGD 427 Query: 484 RILINFFDGQANAIV 498 ++ DG+ ++ V Sbjct: 428 TLVTRLSDGEIHSTV 442 >gi|153824580|ref|ZP_01977247.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-2] gi|149741798|gb|EDM55827.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-2] Length = 446 Score = 382 bits (980), Expect = e-103, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLSNRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|323491639|ref|ZP_08096818.1| exodeoxyribonuclease VII large subunit [Vibrio brasiliensis LMG 20546] gi|323314215|gb|EGA67300.1| exodeoxyribonuclease VII large subunit [Vibrio brasiliensis LMG 20546] Length = 443 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 142/495 (28%), Positives = 239/495 (48%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSLTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +++ + YQ+IIES+ P G G L E+ K K Sbjct: 61 AMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFEELKMK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K P+P PK + VITS TGA + DIL + R P L VI++P VQG+E Sbjct: 121 LAGEGLFAQTSKKPLPEHPKRVGVITSKTGAALFDILDVLKRRDPSLPVIVYPTMVQGEE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ AD+RAPTP+ AAE+ H +LI+ + +L + + + Sbjct: 235 AVGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKDQALISRQHKLVAAMRYYLSEQKR 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 SL L + + L +LD L L +++ I +++ + +RI + + Sbjct: 295 CAASLEHRLERQHPNYQLQRQSQQLDELEVRLHRSMQQYIGVRHQKVERLQHRIALNSPV 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + +Q + + Sbjct: 355 RRLAEQKATLQRLEQKLLDAM--------------------------------------- 375 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 K+ + +++ L + + TLKRGY+ Q I + ++ T Sbjct: 376 --------DRKLLNTRHQLALAAEKLDTVSPLATLKRGYSITQTEQGKVIVRGSDVKTGD 427 Query: 484 RILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 TLVTRLSDGEVRSTV 442 >gi|327483549|gb|AEA77956.1| Exodeoxyribonuclease VII large subunit [Vibrio cholerae LMA3894-4] Length = 446 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|328472589|gb|EGF43452.1| exodeoxyribonuclease VII large subunit [Vibrio parahaemolyticus 10329] Length = 443 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 141/493 (28%), Positives = 238/493 (48%), Gaps = 57/493 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 5 TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P G + LV +++ + YQ+IIES+ P G G L E+ K KL Sbjct: 64 RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K P+P PK + VITS TGA + DIL + R P L V+I+P VQGD+ Sbjct: 124 EGLFAQTNKLPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTMVQGDDAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 184 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H SL+ + +L + + + + Sbjct: 238 HEVDMTIADFVADVRAPTPSAAAELVSRDNSHKDQSLVAKQHKLASAMRYYLAQQKQQSA 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LL L + L +LD L L ++ I + + +R++ + I ++ Sbjct: 298 QLLHRLERQHPSYQLQRQSQQLDELDMRLRRAMQRFIDTRQQAVERKHHRLQLNSPIKHL 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + + + Sbjct: 358 AQQKSRLERVEH-----------------------------------------------K 370 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + K+ + ++I L + + TLKRGY+ Q +T ++ T ++ Sbjct: 371 LMDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTDQGKVVTSADDVKTGDLLV 430 Query: 487 INFFDGQANAIVI 499 +G+ ++ V Sbjct: 431 TRLANGEIHSTVS 443 >gi|153800572|ref|ZP_01955158.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-3] gi|124123861|gb|EAY42604.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae MZO-3] Length = 446 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 143/496 (28%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH +++ R ++++++Q I Q Sbjct: 355 IHLVRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|301024738|ref|ZP_07188378.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 69-1] gi|300396407|gb|EFJ79945.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 69-1] Length = 458 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 142/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VIIFP VQGD+ Sbjct: 122 QAEGLFDQQYKKTLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIFPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIEMANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKPRKKAANP 458 >gi|303251375|ref|ZP_07337553.1| exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302649917|gb|EFL80095.1| exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 486 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 247/494 (50%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 2 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 61 KNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 121 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLR PTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 235 TDVTIADFVADLRVPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 295 KLRLNAQHPARQVQVQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYYVEKKNQQYAQLAQRLQ 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + +NL T+I Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTKNLKVGTQITTK 472 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 473 LSQGEIVSEIIKIN 486 >gi|28897389|ref|NP_796994.1| exodeoxyribonuclease VII large subunit [Vibrio parahaemolyticus RIMD 2210633] gi|153838535|ref|ZP_01991202.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AQ3810] gi|260363547|ref|ZP_05776376.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus K5030] gi|260876348|ref|ZP_05888703.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AN-5034] gi|260898619|ref|ZP_05907115.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus Peru-466] gi|260899281|ref|ZP_05907676.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AQ4037] gi|31563075|sp|Q87S09|EX7L_VIBPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|28805601|dbj|BAC58878.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus RIMD 2210633] gi|149748050|gb|EDM58909.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AQ3810] gi|308086877|gb|EFO36572.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus Peru-466] gi|308092888|gb|EFO42583.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AN-5034] gi|308106612|gb|EFO44152.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AQ4037] gi|308113047|gb|EFO50587.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus K5030] Length = 443 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 139/493 (28%), Positives = 240/493 (48%), Gaps = 57/493 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 5 TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P G + LV +++ + YQ+IIES+ P G G L E+ K KL Sbjct: 64 RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K P+P PK + +ITS TGA + DIL + R P L V+I+P VQGD+ Sbjct: 124 EGLFAQTNKLPLPEHPKRVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTMVQGDDAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 184 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H SL+ + +L + + + + Sbjct: 238 HEVDMTIADFVADVRAPTPSAAAELVSRDNSHKDQSLVAKQHKLASAMRYYLSQQKQQSA 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LL L + L +LD L L ++ I + + +R++ + + ++ Sbjct: 298 QLLHRLERQHPSYQLQRQSQQLDELDMRLRRAMQRFIDTRQQAVERKHHRLQLNSPVKHL 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + +++ + Sbjct: 358 AQQKSRL-----------------------------------------------ERVEHK 370 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + K+ + ++I L + + TLKRGY+ Q +T ++ T ++ Sbjct: 371 LLDTMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVVTSADDVKTGDLLV 430 Query: 487 INFFDGQANAIVI 499 +G+ ++ V Sbjct: 431 TRLANGEIHSTVS 443 >gi|294677914|ref|YP_003578529.1| exodeoxyribonuclease VII large subunit [Rhodobacter capsulatus SB 1003] gi|294476734|gb|ADE86122.1| exodeoxyribonuclease VII, large subunit [Rhodobacter capsulatus SB 1003] Length = 487 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 191/522 (36%), Positives = 271/522 (51%), Gaps = 49/522 (9%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S + PE++VSE+S +K ++E + V VRGE+ G SGH YF LKD ++ I A+ Sbjct: 15 PSGNTPEFTVSEISGAVKRVIEGEFTRVRVRGEV-GRVSRPGSGHLYFDLKDPNAVIAAV 73 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 WKG + +++ PEEG+E + GK+TTFPG SKYQ+I++ + P+G+G L+ LE R+K L Sbjct: 74 SWKGQVARMQIRPEEGMEVIATGKLTTFPGQSKYQLIVDDVEPAGAGALMAMLEARRKAL 133 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECP 187 EGLF K PIP++P +I V+TSP+GAVIRDIL R+ RFP RV+I+PV VQG C Sbjct: 134 AAEGLFDPARKKPIPYLPAVIGVVTSPSGAVIRDILHRLRDRFPRRVLIWPVAVQGQACA 193 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 E+A AI N L G PRPD+II+ARGGGS+EDLW FN+E +VRA A S IP+ISA+ Sbjct: 194 AEVAAAIRGFNALAPGGKVPRPDLIIVARGGGSLEDLWGFNEEAVVRAAAESKIPLISAV 253 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TL D+AAD RAPTPT AAEMAVPV+ L + L ++AR++ + + L Sbjct: 254 GHETDTTLIDFAADRRAPTPTAAAEMAVPVRAELATRLSEMQARISRATQTRMASRAQRL 313 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L +AL + R R D + L L +++ RK F + RI L ++ Sbjct: 314 ADLSRALGRPEAITRPRRQRFDLVADRLLPALRMVVVRKRAAFAPLEARISPKLLQTYLR 373 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 R + + + + R+ Sbjct: 374 VERDRLAGLSDRLLRAEQ---------------------------------------ARL 394 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + +LQ+ Y+ TL+RGY ++ + +T A + I Sbjct: 395 TRA--------QDRFARLAAMLQTLGYQETLRRGYAVVRGPADQVLTSAATAAGLAPLEI 446 Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 F DG+ + + P K + QG LF Sbjct: 447 EFQDGRLRVLPSDAP-PPAPAPKPAAKPRKAAKTPPDQGSLF 487 >gi|162139561|ref|YP_217497.2| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|198243207|ref|YP_002216577.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205353614|ref|YP_002227415.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857922|ref|YP_002244573.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224582952|ref|YP_002636750.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|226697601|sp|B5FR54|EX7L_SALDC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697602|sp|B5R571|EX7L_SALEP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697603|sp|B5RCY1|EX7L_SALG2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783707|sp|C0PYP2|EX7L_SALPC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|197937723|gb|ACH75056.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|205273395|emb|CAR38367.1| Exonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206709725|emb|CAR34075.1| Exonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224467479|gb|ACN45309.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715565|gb|EFZ07136.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326624332|gb|EGE30677.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628713|gb|EGE35056.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 449 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|168817734|ref|ZP_02829734.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205344866|gb|EDZ31630.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|320087005|emb|CBY96774.1| Exonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 449 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|16765832|ref|NP_461447.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167991817|ref|ZP_02572916.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|197262096|ref|ZP_03162170.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|22095670|sp|Q8ZN58|EX7L_SALTY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|16421055|gb|AAL21406.1| exonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|197240351|gb|EDY22971.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205329864|gb|EDZ16628.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261247709|emb|CBG25536.1| Exonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267994624|gb|ACY89509.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159062|emb|CBW18575.1| Probable exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312913498|dbj|BAJ37472.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321222788|gb|EFX47859.1| Exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323130840|gb|ADX18270.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332989440|gb|AEF08423.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 449 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQCVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|194432106|ref|ZP_03064395.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1012] gi|194419635|gb|EDX35715.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1012] gi|332089722|gb|EGI94823.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 155-74] Length = 456 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L II+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPAIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|254285484|ref|ZP_04960448.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae AM-19226] gi|150424346|gb|EDN16283.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae AM-19226] Length = 446 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGKILSTV 443 >gi|317490877|ref|ZP_07949313.1| exodeoxyribonuclease VII [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920424|gb|EFV41747.1| exodeoxyribonuclease VII [Enterobacteriaceae bacterium 9_2_54FAA] Length = 458 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 142/507 (28%), Positives = 231/507 (45%), Gaps = 57/507 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 P ++VS L+ ++ ++E + + + GEIS SSGH YF+LKD+ +++ + Sbjct: 4 PSSPPIFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDDRAQVRCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ + ++ F P+ G + L+ IT + YQ+I ES+ P+G G L E+ K++L Sbjct: 63 FRNSNRRVAFRPQNGQQILMRATITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQRLQ 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EEGLF HK P+P + + V+TS +GA + DIL + R P L VII+P VQG + P Sbjct: 123 EEGLFDPAHKKPLPSPARCVGVVTSSSGAALHDILNVLQRRDPSLPVIIYPTAVQGVDAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N KE D++I+ RGGGS+EDLW FNDE + +AI S IPI+SA+ Sbjct: 183 MQIVRAIELANQRKE------CDVLIVGRGGGSLEDLWSFNDERVAKAIFASQIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ DLRAPTP+ AAE+ + L +++ + R+ + + Sbjct: 237 GHETDVTIADFVGDLRAPTPSAAAELVSRNQTELMRQMLSQQQRMEMAMDYYLARHQQRF 296 Query: 308 NSLLKALPNSDQTLSCSRY--RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R L +L R L+ ++ + R + R+ Sbjct: 297 TRLNHRLQQQHPQLRLARQNTLLLKLRRRLDEAVQTRLRLAERQQERLSQRLNQQQPSAQ 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+N+Q + + Sbjct: 357 IQRNQQRLAQIHNR---------------------------------------------- 370 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +E ++ ++ S L+ + TL RG++ Q N N + + + + Sbjct: 371 -MELLIQRQLSSSRERFGALCSQLEGVSPLATLSRGFSVTQSPNGNVLKSVKQVNNGELL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKC 512 DG + V P ++ K Sbjct: 430 KTRLQDGWIESTVTAITPHPKKRVSKR 456 >gi|16761429|ref|NP_457046.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29140874|ref|NP_804216.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213421227|ref|ZP_03354293.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213647445|ref|ZP_03377498.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213852549|ref|ZP_03382081.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|22095668|sp|Q8Z4Q1|EX7L_SALTI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|25289164|pir||AF0820 exodeoxyribonuclease VII (EC 3.1.11.6) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503729|emb|CAD02714.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29136499|gb|AAO68065.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 449 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 144/499 (28%), Positives = 229/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 HAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI NT E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRVQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|49475937|ref|YP_033978.1| exodeoxyribonuclease VII large subunit [Bartonella henselae str. Houston-1] gi|81827691|sp|Q6G2I3|EX7L_BARHE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|49238745|emb|CAF28004.1| Exodeoxyribonuclease large subunit [Bartonella henselae str. Houston-1] Length = 475 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 214/530 (40%), Positives = 311/530 (58%), Gaps = 56/530 (10%) Query: 1 MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 MN F +K + + E+SVSE++ LK +VE +V VRGEISGYRG H+SGHAYF+LKD Sbjct: 1 MNLFFEKTGATNVAEFSVSEIAGALKRVVEEKFGYVRVRGEISGYRGAHASGHAYFALKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T Sbjct: 61 DKARLEAVIWRGIMEKLKFPPEEGMEVIAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKK EEGLF ++ K P+P++PKII V+TSPTGAVIRDI+ RIS RFPL ++++PV Sbjct: 121 LENRKKKFAEEGLFDEEKKKPLPYMPKIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A A+ N L P+PD++I+ARGGGS+EDLW FNDE++VRA+ S Sbjct: 181 RVQGETSGREVAAAVKGFNVLPLEGLIPKPDLLIVARGGGSLEDLWGFNDEVVVRAVYES 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 S+P+ISA+GHETDWTL DY AD RAPTPT AAE AVPVK L+ +++L ARL + R Sbjct: 241 SLPVISAVGHETDWTLIDYVADWRAPTPTAAAEKAVPVKIDLEVYVVSLGARLRTGLARY 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L ++++ALP +DQ + R D + LE L + +K +F+ + R Sbjct: 301 FDFHQQKLRAIIRALPTADQLFALPRRGFDEISSRLERALCVSCDKKRLYFHTLAIRFTP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L N +K + E + + Sbjct: 361 RLL--NTEKAQHSAKEYTARLHRAFVH--------------------------------- 385 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + I R+L+S +Y+N L+RG+ NN I + + Sbjct: 386 --------------IVEKQRAQLEIAFRLLKSTSYQNILERGFVLALGQNNKPIKRLAQI 431 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 K +I + FFDG+ +++ ++ + KQ QG LF Sbjct: 432 PEKEQINLRFFDGEI-SVITQESFFNR-----SSKSKRIKSKQDDQGTLF 475 >gi|82544958|ref|YP_408905.1| exodeoxyribonuclease VII large subunit [Shigella boydii Sb227] gi|123559008|sp|Q31XY1|EX7L_SHIBS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|81246369|gb|ABB67077.1| exonuclease VII, large subunit [Shigella boydii Sb227] Length = 456 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 E LF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|192362513|ref|YP_001982570.1| exodeoxyribonuclease VII large subunit [Cellvibrio japonicus Ueda107] gi|190688678|gb|ACE86356.1| exodeoxyribonuclease VII, large subunit [Cellvibrio japonicus Ueda107] Length = 460 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 149/514 (28%), Positives = 244/514 (47%), Gaps = 65/514 (12%) Query: 1 MNPFSQKN---------SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSG 51 M+P S ++ S + SVS+L+ + ++E+ + V GE+S I SSG Sbjct: 1 MHPMSHQDLFTSTPAHFSPEREIISVSQLNRRARQLLETQFPLLWVEGELSNV-SIPSSG 59 Query: 52 HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 H YF+LKD+ +++ +++ + F P++G + L+ +++ + G YQII+E + + Sbjct: 60 HWYFTLKDDQAQVRCAMFRNRNMLVRFKPQQGQQVLIRARVSLYEGRGDYQIIVEHMEEA 119 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP 171 G+G L A E+ K +L +EGLF +K P+P +P I VITSPTGA IRDIL + RFP Sbjct: 120 GTGALQRAFEQLKARLGQEGLFDPAYKKPLPGLPGRIGVITSPTGAAIRDILSVLERRFP 179 Query: 172 -LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 + V + PV VQG E +I A+ N D++I+ARGGGS+EDLW FN+E Sbjct: 180 AIPVTLIPVAVQGKEAAPQIVRALELANR------SGLFDVLIVARGGGSLEDLWPFNEE 233 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 ++ RAI S +P+IS +GHE D+T+AD+ ADLRAPTP+ AAE+ VP I E Sbjct: 234 IVARAIFASRVPVISGVGHEVDFTIADFVADLRAPTPSAAAELVVPDGNDWLDKFIGFEV 293 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 L ++R +++ L L + L + + L RLD L L+ +++ + Sbjct: 294 LLEEAMLRKLRHWQQRLTWLRQRLRHPRERLEQQGQRLDNLELRLKAHIQHQLGNYRHKL 353 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + R++ I + + + ++QQ + Sbjct: 354 EQLRLRLQPHHPQVRIVRLHEKLAQQQQRL------------------------------ 383 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN- 469 + ++ R L R+L + NTL+RGY+ Sbjct: 384 --VSLQKQQLQGYKQRFNAAL---------------RLLNTLNPLNTLERGYSLTSHAES 426 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 I+ + + T + +G+ + V P Sbjct: 427 GQLISSSKQIVTGELVKTRLAEGELISRVERTLP 460 >gi|229510708|ref|ZP_04400187.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae B33] gi|229608638|ref|YP_002879286.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae MJ-1236] gi|229350673|gb|EEO15614.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae B33] gi|229371293|gb|ACQ61716.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae MJ-1236] Length = 464 Score = 381 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 143/491 (29%), Positives = 241/491 (49%), Gaps = 57/491 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 25 NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + P+ G + LV +++ + YQII+ES+ P G G L E+ K +L E Sbjct: 84 GNNRLVNIKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+E + Sbjct: 144 GLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQ 203 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFAR 317 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + +LD L LE ++ + + + ++ + ++I+ IH I+ Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R ++++++Q I Q Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + +++ + L + + TL RGY+ + T + Q + ++ Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450 Query: 488 NFFDGQANAIV 498 DG+ + V Sbjct: 451 QLMDGEILSTV 461 >gi|303252815|ref|ZP_07338974.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302648245|gb|EFL78442.1| putative exodeoxyribonuclease VII large subunit [Actinobacillus pleuropneumoniae serovar 2 str. 4226] Length = 486 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ +++ Sbjct: 2 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFRM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL G Sbjct: 61 KNQRVIFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAASG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 121 LFAQEKKKAIPPFTKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 472 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 473 LSQGEIVSEIIKIN 486 >gi|153216237|ref|ZP_01950337.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 1587] gi|124114382|gb|EAY33202.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae 1587] Length = 446 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 244/496 (49%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + ++ Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLVNRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRITQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSTQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|193064750|ref|ZP_03045828.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E22] gi|194427279|ref|ZP_03059829.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B171] gi|260845139|ref|YP_003222917.1| exonuclease VII, large subunit XseA [Escherichia coli O103:H2 str. 12009] gi|260856603|ref|YP_003230494.1| exonuclease VII, large subunit XseA [Escherichia coli O26:H11 str. 11368] gi|192927633|gb|EDV82249.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E22] gi|194414600|gb|EDX30872.1| exodeoxyribonuclease VII, large subunit [Escherichia coli B171] gi|257755252|dbj|BAI26754.1| exonuclease VII, large subunit XseA [Escherichia coli O26:H11 str. 11368] gi|257760286|dbj|BAI31783.1| exonuclease VII, large subunit XseA [Escherichia coli O103:H2 str. 12009] gi|323159379|gb|EFZ45364.1| exodeoxyribonuclease VII, large subunit [Escherichia coli E128010] Length = 456 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P + AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQTVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|254225029|ref|ZP_04918643.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V51] gi|125622416|gb|EAZ50736.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae V51] Length = 446 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 242/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + + + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQCRDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRITQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHKLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|148275|gb|AAA24766.1| exonuclease VII large subunit [Escherichia coli] Length = 456 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSSRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|262192493|ref|ZP_06050644.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae CT 5369-93] gi|262031652|gb|EEY50239.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae CT 5369-93] Length = 446 Score = 381 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 144/496 (29%), Positives = 242/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + I + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASSIRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++ I Q Sbjct: 355 IHLIRQQRFNLIQQEHRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|168261451|ref|ZP_02683424.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205349375|gb|EDZ36006.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 449 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|229525410|ref|ZP_04414815.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae bv. albensis VL426] gi|229338991|gb|EEO04008.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae bv. albensis VL426] Length = 464 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 142/491 (28%), Positives = 240/491 (48%), Gaps = 57/491 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++K Sbjct: 25 NRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVKCAMFK 83 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F P+ G + LV +++ + YQII+ES+ P G G L E+ K +L E Sbjct: 84 GNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKMQLAAE 143 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189 GLF+ K P+P P+ + +ITS TGA + DIL + R L V+I+P VQG+E + Sbjct: 144 GLFAQTRKKPLPDNPRCVGIITSRTGAALHDILHVLKRRDSNLPVVIYPTLVQGEEAAIQ 203 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GH Sbjct: 204 IAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGH 257 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 258 EIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQDTQFAR 317 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + +LD L E ++ + + + ++ + ++I+ IH I+ Sbjct: 318 LQHKLDKQHPQARLERQQQQLDELSLRFEQKMQQRLATQQQRWDRLSHKIELHSPIHLIR 377 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R ++++++Q I Q Sbjct: 378 QQRFNLIQQEQRINQ--------------------------------------------- 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + +++ + L + + TL RGY+ + T + Q + ++ Sbjct: 393 --SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPGDTLVT 450 Query: 488 NFFDGQANAIV 498 DG+ + V Sbjct: 451 QLMDGEILSTV 461 >gi|148825322|ref|YP_001290075.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittEE] gi|148715482|gb|ABQ97692.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittEE] Length = 442 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 141/494 (28%), Positives = 236/494 (47%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ + ++E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L + + ++L L+ + + F + R+K + L + Sbjct: 295 LKQLALRLHNQHPQNQLRVQQAKNEQLTHRLQLAMLRQFENTQQKFTALSVRLKQNPLPY 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q+++Q + + Q Sbjct: 355 RVQRHQQRLEQLQVR--------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + F ++ ++ ++ L + L RGY+ ++ I +++ Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427 Query: 485 ILINFFDGQANAIV 498 I DG+ + V Sbjct: 428 ITTQVADGKIVSKV 441 >gi|168466742|ref|ZP_02700596.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630784|gb|EDX49376.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 449 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIIGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|197250739|ref|YP_002147465.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|226697600|sp|B5F187|EX7L_SALA4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|197214442|gb|ACH51839.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 449 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 HSEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRRIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|168238180|ref|ZP_02663238.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736915|ref|YP_002115575.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|226697607|sp|B4TR85|EX7L_SALSV RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|194712417|gb|ACF91638.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197288884|gb|EDY28257.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 449 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 142/499 (28%), Positives = 227/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQQLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|269965176|ref|ZP_06179310.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 40B] gi|269830162|gb|EEZ84389.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 40B] Length = 496 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 138/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 58 TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 116 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P G + LV +++ + YQ+IIES+ P G G L E+ K KL Sbjct: 117 RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 176 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K +P PK + VITS TGA + DIL + R P L V+I+P VQG++ Sbjct: 177 EGLFAQINKQSLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 236 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 237 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 290 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H +L+ + +L + + + + Sbjct: 291 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 350 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ L + L +LD L L+ + I + + R++ + + + Sbjct: 351 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRVMSRFIALRQQRIERQHYRLQLNSPVTRL 410 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + +Q + Sbjct: 411 SEQKSKLERVEQKL---------------------------------------------- 424 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + K+ + ++I L + + TLKRGY+ Q ITQ ++ + ++ Sbjct: 425 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 483 Query: 487 INFFDGQANAIV 498 +G + V Sbjct: 484 TRLAEGDVRSTV 495 >gi|46143328|ref|ZP_00204443.1| COG1570: Exonuclease VII, large subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 486 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 143/494 (28%), Positives = 246/494 (49%), Gaps = 12/494 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++++L+Y +++++E+ L V + GEIS + SGH Y +LKD ++++ ++ Sbjct: 2 NNILTITQLNYSVRNLLETELGQVWLTGEISNF-SQPVSGHWYLTLKDENAQVRGAMFTM 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P+ G++ LV ++ + YQIIIES+ P+G G L E+ K KL EG Sbjct: 61 KNQRVTFRPQNGMQVLVPASVSLYDPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K IP K + +ITS +GA ++DIL + R P L +II+P VQG E ++I Sbjct: 121 LFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I N +E D++I+ RGGGS+EDLW FN+E + AI S IPIISA+GHE Sbjct: 181 VNTIDLANRRRE------CDVLIVGRGGGSLEDLWCFNEEAVAHAIFRSDIPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ ++ L L + +L+ RL K L Sbjct: 235 TDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWTEKQTYFERL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + + RL + LE+ + + + ++ R+ + +Q+ Sbjct: 295 KLRLNAQHPARQVQMQQQRLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQ 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + Q ++Q L + K + + R + + +L R++ Sbjct: 355 QQMQLKQAEYRLAQAIEQTLIRKQNQWKHIVEQVK--RNPLPYCVEKKNQQYAQLAQRLQ 412 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F + K+ + + + L RGY+ Q + + NL T+I Sbjct: 413 FAIEKKLTKEQQAFQELCTRIDGLSPLKILARGYSVTQTSKGEILRSTENLKVGTQITTK 472 Query: 489 FFDGQANAIVINKA 502 G+ + +I Sbjct: 473 LSQGEIVSEIIKIN 486 >gi|153821384|ref|ZP_01974051.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae B33] gi|126521094|gb|EAZ78317.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae B33] Length = 446 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 143/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNIKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQE 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|168232076|ref|ZP_02657134.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471378|ref|ZP_03077362.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194457742|gb|EDX46581.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205333639|gb|EDZ20403.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 449 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 144/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 HSEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRIGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|331669255|ref|ZP_08370103.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA271] gi|331064449|gb|EGI36360.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA271] Length = 500 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 145/515 (28%), Positives = 238/515 (46%), Gaps = 57/515 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKR 519 + DG + V N P K + + + +R Sbjct: 429 LTTRLEDGWIESEVKNIQPVKNRVKRCIKPARIQR 463 >gi|331648203|ref|ZP_08349293.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M605] gi|281179560|dbj|BAI55890.1| exonuclease VII large subunit [Escherichia coli SE15] gi|330912281|gb|EGH40791.1| exodeoxyribonuclease 7 large subunit [Escherichia coli AA86] gi|331043063|gb|EGI15203.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M605] Length = 455 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 141/507 (27%), Positives = 229/507 (45%), Gaps = 57/507 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFHPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVHQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGDT 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V ++ K Sbjct: 429 LTTRLGDGVVVSEVSAVTKTRKPRKKT 455 >gi|262172164|ref|ZP_06039842.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus MB-451] gi|261893240|gb|EEY39226.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus MB-451] Length = 446 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 139/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + +IA AI + N+ E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASDIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQQH 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L + L + +LD L LE + + + + ++ + ++I+ + Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKMHQRLATQQQRWDRLSHKIQLNSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 H I++ R ++L+++Q + Q Sbjct: 355 THLIRQQRFNLLQQEQRLTQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + H + +++ + + + + TL RGY+ + + Q + Sbjct: 375 -------SIQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTAQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|204929707|ref|ZP_03220781.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204321426|gb|EDZ06626.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 449 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQ+I ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQMIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIKLANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|313650995|gb|EFS15395.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri 2a str. 2457T] Length = 456 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ +G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQAAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 E LF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + T Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|145632644|ref|ZP_01788378.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 3655] gi|144986839|gb|EDJ93391.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 3655] Length = 442 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 238/494 (48%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ ++ ++E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSAVRQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA Sbjct: 181 TAEIVQMIELANLRQE------VDVLIVGRGGGSLEDLWCFNEEDVARAIFRSTLPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L + + ++L L+ + + F + R+K + L + Sbjct: 295 LKQLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q+++QH+ + Q Sbjct: 355 QVQRHQQHLEQLQVR--------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + F ++ ++ ++ L + L RGY+ ++ I +++ Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427 Query: 485 ILINFFDGQANAIV 498 I DG+ + V Sbjct: 428 ITTQVADGKIVSKV 441 >gi|320196343|gb|EFW70967.1| Exodeoxyribonuclease VII large subunit [Escherichia coli WV_060327] Length = 458 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 142/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQLRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|238913649|ref|ZP_04657486.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 449 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 145/499 (29%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 HSEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANVRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDNYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|323967954|gb|EGB63366.1| exodeoxyribonuclease VII [Escherichia coli M863] gi|327252212|gb|EGE63884.1| exodeoxyribonuclease VII, large subunit [Escherichia coli STEC_7v] Length = 455 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 144/507 (28%), Positives = 233/507 (45%), Gaps = 57/507 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q KNP+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVHSAQQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + T L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKT 455 >gi|121601929|ref|YP_989310.1| exodeoxyribonuclease VII large subunit [Bartonella bacilliformis KC583] gi|189037838|sp|A1UTK7|EX7L_BARBK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|120614106|gb|ABM44707.1| exodeoxyribonuclease VII, large subunit [Bartonella bacilliformis KC583] Length = 476 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 210/527 (39%), Positives = 307/527 (58%), Gaps = 56/527 (10%) Query: 4 FSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 F++K + + E+SVSE++ LK +VE +V +RGEISGYRG H+SGHAYF+LKD+ + Sbjct: 5 FTEKPVATNVAEFSVSEIANALKRVVEDKFGYVRIRGEISGYRGAHASGHAYFALKDDKA 64 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 R++A+IW + K+ F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T LE Sbjct: 65 RLEAVIWLSVMKKLSFPPEEGMEVIAVGKLTTYPGSSKYQIVIEALEPTGVGALMTLLEN 124 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182 RKKKL EEGLF +K P+P++PKII V+TSPTGAVIRDI+ RI RFPL ++++PV+VQ Sbjct: 125 RKKKLAEEGLFDAANKKPLPYMPKIIGVVTSPTGAVIRDIIHRIFDRFPLHILVWPVRVQ 184 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ C +E+A+A+ N L G P+PD+II+ARGGGS+EDLW FNDE +VRA+ S+IP Sbjct: 185 GETCGREVASAVEGFNALFLGGGIPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYASAIP 244 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +ISA+GHETDWTL DYAAD RAPTPTGAAE AVPVK ++ L ++ +R + R + Sbjct: 245 VISAVGHETDWTLIDYAADWRAPTPTGAAERAVPVKLDIEVHLASINSRFRVGLARYFDF 304 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L +L++ LP DQ + R D + L+ L + +K +F+ + R L Sbjct: 305 HQQKLRALVRGLPTVDQLFALPRRGFDEISSRLQRALCVSYDKKCFYFHALSLRFSPRLL 364 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 N +K + I E + + Sbjct: 365 --NTKKAQYAIQEYTGRLHR---------------------------------------- 382 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 ++ V + R+L+S +Y+N L+RG+ ++ I + L Sbjct: 383 -------AFLRNVEKQRAQVEMACRLLKSTSYQNILERGFVLALGKDHKPIKRLMQLPET 435 Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG+ + ++A + K+ + + QG LF Sbjct: 436 GQISLRFFDGEIDVSTHDRAVNRSLKNKRIKSQKD------DQGLLF 476 >gi|163802482|ref|ZP_02196375.1| exodeoxyribonuclease VII large subunit [Vibrio sp. AND4] gi|159173783|gb|EDP58598.1| exodeoxyribonuclease VII large subunit [Vibrio sp. AND4] Length = 443 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 137/494 (27%), Positives = 240/494 (48%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 3 SQTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++G ++ F P G + LV +++ + YQ+IIES+ P G G L E K KL Sbjct: 62 MFRGNNRRVTFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEALKMKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ +K +P P+ + VITS TGA + DIL + R P L V+++P VQG++ Sbjct: 122 AAEGLFAQTNKQSLPEHPRRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA+S IPIISA Sbjct: 182 AIQIAQAIGRANSRGE------CDVLIVGRGGGSLEDLWCFNNEILARTIASSQIPIISA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D T+AD+ AD+RAPTP+ AAE+ H +L+ + +L + + + + Sbjct: 236 VGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKNQALVARQHKLASAMRYYLAQQKQQ 295 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 SL+ L + L +LD L L+ ++ I + + +R++ + + Sbjct: 296 SASLMHRLERQHPSYQLQRQTQQLDELDMRLQRAMQGFITTRQQAVERKHHRLQLNSPVK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + + + +Q Sbjct: 356 RLAEQKSKLDRVEQ---------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + K+ + ++I L + + TLKRGY+ Q +TQ + + + Sbjct: 370 -KLMDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQIVTQAKEVKSGDV 428 Query: 485 ILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 429 LVTRLSDGELRSTV 442 >gi|331684154|ref|ZP_08384750.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H299] gi|331079106|gb|EGI50308.1| exodeoxyribonuclease VII, large subunit [Escherichia coli H299] Length = 458 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 143/510 (28%), Positives = 230/510 (45%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|326386127|ref|ZP_08207751.1| exodeoxyribonuclease VII large subunit [Novosphingobium nitrogenifigens DSM 19370] gi|326209352|gb|EGD60145.1| exodeoxyribonuclease VII large subunit [Novosphingobium nitrogenifigens DSM 19370] Length = 493 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 186/523 (35%), Positives = 266/523 (50%), Gaps = 49/523 (9%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + P S+SELS LK VE V VRGE+SG + +SGH Y SLKD ++R+D Sbjct: 19 EAAGDNAPALSISELSQLLKRTVEDRFGFVRVRGELSGVK-RAASGHLYLSLKDENARLD 77 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++W+G++ ++ F P +G+E + GK+TT+PG S YQI+I+ + +G G LL LEK K Sbjct: 78 GVMWRGSVQRLGFQPADGVEVIATGKLTTYPGRSNYQIVIDRMEIAGEGALLALLEKTKA 137 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 +L EGLF K P+P++P++I V+TSPTGAVIRDIL R+ RFP V+++PV VQG Sbjct: 138 RLAAEGLFDPARKRPLPYLPRVIGVVTSPTGAVIRDILHRLRDRFPSHVVVWPVLVQGQG 197 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 ++A A+ + L+ G RPD++I+ARGGGSIEDLW FN+E +VRAIA S+IP+IS Sbjct: 198 AASQVAAAVRGFSELEPGGPVARPDLVIVARGGGSIEDLWSFNEEEVVRAIAASTIPVIS 257 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TLAD+AAD RAPTPT AAEMAVPV+ L + L +LEAR + R + Sbjct: 258 AVGHETDTTLADFAADRRAPTPTAAAEMAVPVRAELMAGLADLEARRQRALGRQLAQARE 317 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L+ + LP LS RLD L L +L + Sbjct: 318 RLDQRARRLPPPHALLSGQAQRLDDLGERLRRSLGHRTELAAAMLARHAGSL-------- 369 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + A+L + + R+ L + L+ Sbjct: 370 --------------------------------RPALLETRLRRERERLLALRLRPEALLQ 397 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 RIE V R+ +S + L RGY + D+ + + A + + Sbjct: 398 RIETA--------RGRVDALDRLRRSLDPEAPLARGYVLVTDSAGRVVKTRSAAAGEAEL 449 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + F DG + +PT + Q +L Sbjct: 450 TLKFADGSLGVVPAGAGSTGGEPTPRPARAKTPPSTGDRQPKL 492 >gi|126725606|ref|ZP_01741448.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium HTCC2150] gi|126704810|gb|EBA03901.1| exodeoxyribonuclease VII, large subunit [Rhodobacterales bacterium HTCC2150] Length = 510 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 196/532 (36%), Positives = 285/532 (53%), Gaps = 25/532 (4%) Query: 1 MNPFSQKNSL--DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PE++V+E+S +K +E + S V VR E+ G SGH Y LK Sbjct: 1 MSDLIDDPQEGENAPEFTVTEISGAVKRTIEGSFSRVRVRAEL-GRVSRPRSGHVYLDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S + +IWKG +++ PEEG+E + G++TTF G SKYQ++IE L P+G G L+ Sbjct: 60 DDKSVLSGVIWKGVASRLATQPEEGLEVVATGRLTTFGGQSKYQMVIEDLAPAGMGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRK+ EGLF K P+P++P++I V+TSP+GAVIRDIL R+ RFP RV+I+P Sbjct: 120 MLEKRKQAFAAEGLFDASRKQPLPYLPEVIGVVTSPSGAVIRDILHRLRDRFPRRVLIWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG +C E+A AI N L G PRPD++I+ARGGGS+EDLW FN+E +VRA A Sbjct: 180 VAVQGQKCAPEVARAIAGFNALTPGGALPRPDLLIVARGGGSVEDLWGFNEEAVVRAAAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL DY +DLRAPTPT AAE AVPV+ L S + L AR + + Sbjct: 240 SDIPLISAVGHETDTTLIDYVSDLRAPTPTAAAEAAVPVRMELMSVIDELGARSGRALRQ 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I + + L + LP +Q + +R RLD L L L + R+ + I ++ Sbjct: 300 GIMQRRDRARDLARILPKPEQLVENARQRLDTLSDRLPKALASVRQRRQVALSRISGGLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L ++ R+ + + + + + + E + Sbjct: 360 PTTLQRRLEAERRRSDDLARRLGPALVRGRDRLVQENRR------------------SRE 401 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 ++ + R + + +I T++S R+ Q+ YK TLKRGY ++ ITQ+ Sbjct: 402 NLDVVFARFQRAANSQISDWKTALSGAERMRQTLGYKETLKRGYAVVRGA-GQVITQREE 460 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPT-KKCQLHNNKREKQGTQGELF 529 A + I F DG+ N V ++ T + QG LF Sbjct: 461 AAKHHALEIEFHDGRVN--VGETQTAEKTATVTPVMKPKKPKPTDKDQGSLF 510 >gi|322613746|gb|EFY10685.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619511|gb|EFY16387.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625016|gb|EFY21845.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629541|gb|EFY26317.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634028|gb|EFY30765.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635534|gb|EFY32245.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639891|gb|EFY36568.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644413|gb|EFY40954.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649134|gb|EFY45574.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655223|gb|EFY51532.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658270|gb|EFY54536.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664271|gb|EFY60468.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669438|gb|EFY65587.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673165|gb|EFY69271.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676557|gb|EFY72625.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683307|gb|EFY79321.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322685807|gb|EFY81800.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192517|gb|EFZ77746.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199562|gb|EFZ84653.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204663|gb|EFZ89661.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208111|gb|EFZ93056.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210165|gb|EFZ95066.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217032|gb|EGA01754.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219227|gb|EGA03723.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323225452|gb|EGA09683.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229279|gb|EGA13403.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235406|gb|EGA19490.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237408|gb|EGA21471.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245162|gb|EGA29163.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248865|gb|EGA32791.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253153|gb|EGA36985.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255386|gb|EGA39154.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260590|gb|EGA44200.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266366|gb|EGA49854.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323269803|gb|EGA53253.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 449 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GE+S + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGELSNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|254450924|ref|ZP_05064361.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus 238] gi|198265330|gb|EDY89600.1| exodeoxyribonuclease VII, large subunit [Octadecabacter antarcticus 238] Length = 515 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 171/530 (32%), Positives = 266/530 (50%), Gaps = 18/530 (3%) Query: 1 MNPFSQKNSL-DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + + + PE++V+ELS +K +E HV V+ E+ G SGH YF LKD Sbjct: 3 MDLTDEPEAAGNTPEFTVTELSGAVKRAIEGEFGHVRVKAEV-GRVVHARSGHLYFDLKD 61 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + + WKG + + +PEEG+E +V G++TTF SKYQ+ + +G G L+ Sbjct: 62 DRNVLACTTWKGQVADLSVIPEEGMEVVVKGRMTTFGSQSKYQLNATEVAVAGVGALMAM 121 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 L++RKK L EGLF+ + K +PF+P +I VITSPTGAV+RDIL R+ RFP +VI++PV Sbjct: 122 LDQRKKALEAEGLFAAERKQALPFLPDVIGVITSPTGAVVRDILHRLRDRFPRKVIVWPV 181 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +C ++A AI N + G PRPD+II+ARGGGSIEDLW FN+E++ RA A S Sbjct: 182 AVQGKDCAPQVARAIDGFNAMTSGGALPRPDLIIVARGGGSIEDLWGFNEEIVARAAAAS 241 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISAIGHETD TL D+ +D RAPTP+ AAEMAVPV+ L +++ + AR + Sbjct: 242 TIPLISAIGHETDTTLIDFVSDQRAPTPSAAAEMAVPVRLELMAAVDQMGARATRAVTDG 301 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + L + LP Q ++ R D +L+ L + ++ Sbjct: 302 VARRKQRVADLARVLPKPKQLTEDAKQRFDYWSEKLDVALIGRVAAGRLRLGDASGLLRP 361 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L + + R+ + + + + + + L E Sbjct: 362 SVLGNRLTLGRERMSGLNARLGPALGRMAAQARRDLDGQARRL--RPETIAVAQTRAVKD 419 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + + R+ + + + + R+ ++ Y+ TLKRGY ++ + +T + Sbjct: 420 LAATLRRMTTAAHTQTQKQRSRLEALDRMRETLGYRETLKRGYAVVRG-DGVVVTTAKAA 478 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG + QG LF Sbjct: 479 KAALTLDIEFADGTM-------------APTSKLAKPKGKMPPPDQGSLF 515 >gi|320180499|gb|EFW55430.1| Exodeoxyribonuclease VII large subunit [Shigella boydii ATCC 9905] Length = 456 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L II+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGATLHDILHVLKRRDPSLPAIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQMQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|261252186|ref|ZP_05944759.1| exodeoxyribonuclease VII large subunit [Vibrio orientalis CIP 102891] gi|260935577|gb|EEX91566.1| exodeoxyribonuclease VII large subunit [Vibrio orientalis CIP 102891] Length = 443 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 138/495 (27%), Positives = 239/495 (48%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSLTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +++ + YQ+IIES+ P G G L E+ K K Sbjct: 61 AMFRGNNRRVTFKPKNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFEELKMK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K P+P PK + VITS TGA + DIL + R P L V+++P VQG+E Sbjct: 121 LAGEGLFAQTSKKPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ AD+RAPTP+ AAE+ H +L++ + +L + + + + Sbjct: 235 AVGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKDQALLSRQNKLVSAMRYYLSEQKR 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 LL L + L +LD L L ++E + ++ + R++ + + Sbjct: 295 HNALLLHRLERQHPSYQLQRQSQQLDELEVRLHRSMERYLSQRSQKVERQQYRLELNSPV 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + +Q + + Sbjct: 355 KRLSEQKSTLQRLEQKLLDAM--------------------------------------- 375 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ + +++ L + + TLKRGY+ Q +T+ ++ T Sbjct: 376 --------DRRLLNTRHQLALAAEKLDTVSPLATLKRGYSISQTEQGKVLTKTSDIKTGD 427 Query: 484 RILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 TLVTRLSDGEIRSTV 442 >gi|145628760|ref|ZP_01784560.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 22.1-21] gi|144979230|gb|EDJ88916.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 22.1-21] Length = 442 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 145/494 (29%), Positives = 237/494 (47%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ + I+E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDKNAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+VII+P VQG E Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVIIYPTAVQGKEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L + + ++L L+ + + F + R+K + L + Sbjct: 295 LKQLALRLQNQHPQNQLRAQQAKNEQLAHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 IQ+++QH+ + Q Sbjct: 355 RIQRHQQHLEQLQVR--------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + F ++ ++ ++ L + L RGY+ ++ I +++ Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427 Query: 485 ILINFFDGQANAIV 498 I DG+ + V Sbjct: 428 ITTQVADGKIVSKV 441 >gi|260869198|ref|YP_003235600.1| exonuclease VII, large subunit XseA [Escherichia coli O111:H- str. 11128] gi|257765554|dbj|BAI37049.1| exonuclease VII, large subunit XseA [Escherichia coli O111:H- str. 11128] gi|323177367|gb|EFZ62955.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 1180] Length = 456 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 234/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P + AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQTVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRL 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|254563195|ref|YP_003070290.1| exonuclease VII, large subunit OB-fold nucleic acid binding domain [Methylobacterium extorquens DM4] gi|254270473|emb|CAX26473.1| putative exonuclease VII, large subunit OB-fold nucleic acid binding domain [Methylobacterium extorquens DM4] Length = 522 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 202/549 (36%), Positives = 287/549 (52%), Gaps = 68/549 (12%) Query: 2 NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 P + PE+SV +L+ LK +E HV +RGEI+GYRG H SGHAYFSLKD Sbjct: 21 EPAPSALLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++IDA++WKG L ++ P+EG+E + GKITTF G S YQI+I+S+ P+G G + L Sbjct: 81 SAKIDAVVWKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF K PIPF+P++I V+TSPTGAVIRDIL R+ RFP V+++PV+ Sbjct: 141 EERKRQLAAEGLFETDRKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +EIA AI N L PRPD++I+ARGGGSIEDLW FN+E +VRA A S Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+ L + + L AR ++R I Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELAAQVHELGARQAGTMLRRI 320 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + +L++A+P +D L+ R RLD + + Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L N + +R+ + + + R + E A L + + + + + Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + T +L + +YK L RGY ++D + + A Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSAAAAA 453 Query: 481 TKTRILINFFDGQANAIVIN-----------KAPPKEQPTKKCQLHNNKREKQGT----- 524 R + F DG A APP +P + + + + Sbjct: 454 QAARFQLQFADGALFARPEEAPDDPVAPPVADAPPSPRPKRAPRRAAPEPAPKPEKVTAE 513 Query: 525 ----QGELF 529 QG LF Sbjct: 514 PAARQGSLF 522 >gi|148827599|ref|YP_001292352.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittGG] gi|148718841|gb|ABQ99968.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittGG] Length = 442 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 143/494 (28%), Positives = 236/494 (47%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ + ++E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L + + +L L+ + + F + R+K + L + Sbjct: 295 LKQLTLRLHNQHPQNQLRVQQAKNAQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 IQ+++QH+ + Q Sbjct: 355 RIQRHQQHLEQLQVR--------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + F ++ ++ ++ L + L RGY+ ++ I +++ Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427 Query: 485 ILINFFDGQANAIV 498 I DG+ + V Sbjct: 428 ITTQVADGKIVSKV 441 >gi|56412606|ref|YP_149681.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197361541|ref|YP_002141177.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81821470|sp|Q5PI54|EX7L_SALPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697606|sp|B5BAZ3|EX7L_SALPK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|56126863|gb|AAV76369.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093017|emb|CAR58453.1| exodeoxyribonuclease large subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 449 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQ+I ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQVIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVNAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|200386969|ref|ZP_03213581.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|199604067|gb|EDZ02612.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] Length = 449 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 143/499 (28%), Positives = 227/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + R I S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARTIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|258619963|ref|ZP_05715003.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM573] gi|258587696|gb|EEW12405.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM573] Length = 446 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 LLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + +IA AI + N+ E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASDIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQQH 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L + L + +LD L LE + + + + + + ++I+ + Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKIHQRLATQQQRWERLSHKIQLNSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 H I++ R ++L+++Q + Q Sbjct: 355 THLIRQQRFNLLQQEQRLTQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + H + +++ + + + + TL RGY+ + + Q + Sbjct: 375 -------SIQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTAQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|254506777|ref|ZP_05118917.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus 16] gi|219550358|gb|EED27343.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus 16] Length = 443 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 139/495 (28%), Positives = 236/495 (47%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSLTNQNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +++ + YQ+IIES+ P G G L ++ K K Sbjct: 61 AMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDELKMK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ +K P+P PK + ++TS TGA + DIL + R P L V+I+P VQG+E Sbjct: 121 LAGEGLFAQTNKQPLPEHPKCVGIVTSKTGAALFDILDVLKRRDPSLPVVIYPTMVQGEE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS Sbjct: 181 AAIQIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ AD+RAPTP+ AAE+ H + + + +L + + + Sbjct: 235 AVGHEIDVTIADFVADMRAPTPSAAAELVSRDNSHKDQVITSHQHKLASAMRHYLSQHKQ 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 T SLL L + L +LD L L+ +E + + + ++++ I Sbjct: 295 TNASLLHRLEKQHPRHQLQRQSQQLDDLDMRLQRGMERYLSGRAQKIERQQHKLQLHSPI 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + +Q + + Sbjct: 355 KRLNEQASSLQRLEQKLLDAM--------------------------------------- 375 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 K+ + +++ L + TLKRGY+ Q+ + IT+ T Sbjct: 376 --------DRKLLNTRHQLALAAEKLDTVNPLATLKRGYSITQNQQGDVITKASQTKTGD 427 Query: 484 RILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 TLVTRLSDGEIRSTV 442 >gi|197334825|ref|YP_002155393.1| exodeoxyribonuclease VII, large subunit [Vibrio fischeri MJ11] gi|226697620|sp|B5FAX9|EX7L_VIBFM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|197316315|gb|ACH65762.1| exodeoxyribonuclease VII, large subunit [Vibrio fischeri MJ11] Length = 449 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 138/496 (27%), Positives = 238/496 (47%), Gaps = 57/496 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS SGH Y +LKD+ +++ ++ Sbjct: 5 SNPRIFTVSRLNAEVRLLLENEMGIVWLVGEISNLTV-PVSGHWYLTLKDSQAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++ F P+ G + LV +++ + YQ+IIES+ P G G L ++ K L Sbjct: 64 KGNNRRVTFKPQNGKQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFDQLKMSLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P PK + +ITS TGA + DIL + R P L V+I+P VQG Sbjct: 124 EGLFAQTAKKTLPEQPKRVGIITSQTGAALFDILHVLKRRDPNLPVVIYPTMVQGSGAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E DI+I+ RGGGS+EDLW FN+E++ R IA S IPI+SA+G Sbjct: 184 QIAQAIGRANSRNE------CDILIVGRGGGSLEDLWCFNEEIVARTIAASEIPIVSAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ ++ + + RLN+ + R + ++ +L+ Sbjct: 238 HEIDVTIADFVADVRAPTPSAAAELVSRDLSAQLQTVAHQKRRLNSAMERYLSHQQRSLS 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + + L+ RLD L + L ++++ + R+ ++ R+ + I Sbjct: 298 AYQHRIEKQHPQMQLNNQSQRLDDLNQRLMNHIQQRLQRQQYRVENLTLRLNNLSPTKRI 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +++ HI E ++ + Sbjct: 358 SQDKLHIEELKRRLL--------------------------------------------- 372 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + +++ L + + TL RGY+ + + IT + + I Sbjct: 373 --DSMDRNLLMQRHQLALAAEKLDTVSPLATLMRGYSITHNQDGKVITSTKQVELGDNIT 430 Query: 487 INFFDGQANAIVINKA 502 F DG + V + Sbjct: 431 TRFADGDITSTVTKAS 446 >gi|194445807|ref|YP_002041771.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|226697605|sp|B4T0N9|EX7L_SALNS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|194404470|gb|ACF64692.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 449 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 142/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQ+I ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQVIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT T+ + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVNAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|258541125|ref|YP_003186558.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-01] gi|256632203|dbj|BAH98178.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635260|dbj|BAI01229.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638315|dbj|BAI04277.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641369|dbj|BAI07324.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644424|dbj|BAI10372.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647479|dbj|BAI13420.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650532|dbj|BAI16466.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653523|dbj|BAI19450.1| exodeoxyribonuclease VII large subunit [Acetobacter pasteurianus IFO 3283-12] Length = 484 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 165/502 (32%), Positives = 260/502 (51%), Gaps = 30/502 (5%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 S + PE++VSE+S ++ +E S V VRGEI+ + SGH YFSLKD +I Sbjct: 8 PSASNNVPEFTVSEISGAIRRTLEGTFSRVRVRGEITELKRYP-SGHVYFSLKDERGKIS 66 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++W+G+++++ PE G+E + GKI+ + S YQ+++E + +G G LL +E+ + Sbjct: 67 GVVWRGSVSRLGLAPENGVEIIATGKISAYGERSSYQLVVERMEYAGEGALLARIERLRI 126 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 +L EEGLF K IP +P++I V+TSP GAV+ DI + RFP VI++PV VQG+ Sbjct: 127 RLAEEGLFDTACKKAIPLLPRVIGVVTSPQGAVLHDICTTLQRRFPRPVIVWPVPVQGEG 186 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 IA AI + L PRPD++I+ARGGGS+EDL FNDE +VRA A +IP+IS Sbjct: 187 AAARIAAAIDGFSQLDGQGAVPRPDVLIVARGGGSLEDLMAFNDEAVVRAAAACTIPLIS 246 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TL D+A+D RAPTPT AAEMAVPV+ L + + + AR + RL++ Sbjct: 247 AVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLADIEHRNARALGALSRLLQTARL 306 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L+ A+P+ L +R +LD R L+ L ++ R+ I + + Sbjct: 307 RLDRASSAMPDLPSLLQTARMQLDDRGRRLDVALPALVQRRKADLVAIERHMPAV----- 361 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + + +++ A L LR Sbjct: 362 ----ETLLAGRRTRLAVLANMLQASMAHTFQKQDARLGRLRISPAP-------------- 403 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L ++ T+++ L++ + + L RGY + +T L R+ Sbjct: 404 -----LQALVRERRTALAGIAGQLEAVSPRAVLARGYALVT-AEGRPVTSAEQLRDGERV 457 Query: 486 LINFFDGQANAIVINKAPPKEQ 507 + F DG A++ + +Q Sbjct: 458 ELTFGDGARPAVIGDGTRQPKQ 479 >gi|218701016|ref|YP_002408645.1| exodeoxyribonuclease VII large subunit [Escherichia coli IAI39] gi|226694649|sp|B7NQV5|EX7L_ECO7I RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|218371002|emb|CAR18830.1| exonuclease VII, large subunit [Escherichia coli IAI39] Length = 455 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 142/507 (28%), Positives = 230/507 (45%), Gaps = 57/507 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKA 455 >gi|301169099|emb|CBW28696.1| exonuclease VII, large subunit [Haemophilus influenzae 10810] Length = 439 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 142/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E N + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + +R+K + L + I Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSSRLKQNPLPYRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++QH+ + Q Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVKQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|91211832|ref|YP_541818.1| exodeoxyribonuclease VII large subunit [Escherichia coli UTI89] gi|117624736|ref|YP_853649.1| exodeoxyribonuclease VII large subunit [Escherichia coli APEC O1] gi|218559433|ref|YP_002392346.1| exodeoxyribonuclease VII large subunit [Escherichia coli S88] gi|237705016|ref|ZP_04535497.1| exodeoxyribonuclease VII large subunit [Escherichia sp. 3_2_53FAA] gi|122422914|sp|Q1R8M7|EX7L_ECOUT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158512548|sp|A1AE45|EX7L_ECOK1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694647|sp|B7MHZ0|EX7L_ECO45 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|91073406|gb|ABE08287.1| exodeoxyribonuclease VII large subunit [Escherichia coli UTI89] gi|115513860|gb|ABJ01935.1| exodeoxyribonuclease VII large subunit [Escherichia coli APEC O1] gi|218366202|emb|CAR03948.1| exonuclease VII, large subunit [Escherichia coli S88] gi|226901382|gb|EEH87641.1| exodeoxyribonuclease VII large subunit [Escherichia sp. 3_2_53FAA] gi|294489850|gb|ADE88606.1| exodeoxyribonuclease VII, large subunit [Escherichia coli IHE3034] gi|307625938|gb|ADN70242.1| exodeoxyribonuclease VII large subunit [Escherichia coli UM146] gi|315288086|gb|EFU47486.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 110-3] gi|323949166|gb|EGB45057.1| exodeoxyribonuclease VII [Escherichia coli H252] gi|323955747|gb|EGB51505.1| exodeoxyribonuclease VII [Escherichia coli H263] Length = 458 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 141/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQLKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALESQLKRAGQQQQRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|147675003|ref|YP_001216251.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae O395] gi|262168786|ref|ZP_06036481.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC27] gi|172047437|sp|A5F3E9|EX7L_VIBC3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|146316886|gb|ABQ21425.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae O395] gi|227012590|gb|ACP08800.1| exodeoxyribonuclease VII, large subunit [Vibrio cholerae O395] gi|262022904|gb|EEY41610.1| exodeoxyribonuclease VII large subunit [Vibrio cholerae RC27] Length = 446 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 143/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQE 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + ++ + ++I+ Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + L RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLAALARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|240850521|ref|YP_002971920.1| exodeoxyribonuclease VII large subunit [Bartonella grahamii as4aup] gi|240267644|gb|ACS51232.1| exodeoxyribonuclease VII large subunit [Bartonella grahamii as4aup] Length = 476 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 208/530 (39%), Positives = 305/530 (57%), Gaps = 56/530 (10%) Query: 1 MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 ++ FS+K + E++VSE++ LK +VE +V VRGEISGYRG H+SGHAYF+LKD Sbjct: 2 VSLFSEKTGVTNVAEFTVSEIAGALKRVVEEKFGYVRVRGEISGYRGTHASGHAYFALKD 61 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T Sbjct: 62 DKARLEAVIWRGVMEKLKFPPEEGMEVVAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 121 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKK +EEGLF + K P+P++P+II V+TSPTGAVIRDI+ RIS RFPL ++++PV Sbjct: 122 LENRKKKFVEEGLFDEAKKKPLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 181 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A A+ N L G P+PD+II+ARGGGS+EDLW FNDE +VRA+ S Sbjct: 182 RVQGETSGREVAVAVEGFNALAPGGFIPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYAS 241 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 ++P+ISA+GHETDWTL DY AD RAPTPTGAAE AVPVK L+ + +L ARL ++R Sbjct: 242 ALPVISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKLDLEVCVASLGARLRKGLVRS 301 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + + LP DQ + R D + L+ L + +K F R++ Sbjct: 302 FDFHQQKLRAARRGLPTVDQLFALPRRGFDEISNRLQRALCVSYDKKCFSF--HTLRLRL 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + N +K +++ E + + Sbjct: 360 SLRLLNSEKAQRNTKEYTARLHR------------------------------------- 382 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + + R+L+S +Y+N L+RG+ +N I + Sbjct: 383 ----------AFVRSVEKQRAQMELAFRLLKSTSYQNILERGFVLALGQDNKPIKRLIQF 432 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG + + K K+ +L QG LF Sbjct: 433 PDTGQISLRFFDGDISVAIQEPVFSKRSKHKQIKL------PSDDQGTLF 476 >gi|325496461|gb|EGC94320.1| exodeoxyribonuclease VII large subunit [Escherichia fergusonii ECD227] Length = 455 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRASITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q KNP+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + T L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKK 454 >gi|324113000|gb|EGC06976.1| exodeoxyribonuclease VII [Escherichia fergusonii B253] Length = 455 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q KNP+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + T L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKK 454 >gi|89055791|ref|YP_511242.1| exodeoxyribonuclease VII large subunit [Jannaschia sp. CCS1] gi|88865340|gb|ABD56217.1| Exodeoxyribonuclease VII large subunit [Jannaschia sp. CCS1] Length = 519 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 193/528 (36%), Positives = 290/528 (54%), Gaps = 11/528 (2%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + + + + PE++VSE+S +K VE +HV VRGE+ G + SGH Y LKD+ Sbjct: 3 DLIDDEGTGNSPEFTVSEISGAVKRTVEGAFAHVRVRGEV-GRLSLPRSGHIYLDLKDDR 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 S + +++WKG N++ PEEG+E + G++TTFPG SKYQ++I+ L P+G+G L+ LE Sbjct: 62 SVLASVVWKGVANRLTHRPEEGMEVIATGRLTTFPGQSKYQLVIDDLQPAGAGALMAMLE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 KR+K L EGLF D K P+PF+P++I V+TSP+GAVIRDIL R+ RFP +V+I+PV V Sbjct: 122 KRRKALAAEGLFDDARKQPLPFLPEVIGVVTSPSGAVIRDILHRLRDRFPRKVLIWPVAV 181 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +C ++ANAI N L G PRPD++I+ARGGGS+EDLW FN+E +VRA A+S+I Sbjct: 182 QGAKCGPDVANAIRGFNALTPGGALPRPDLLIVARGGGSLEDLWGFNEEEVVRATADSTI 241 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETD TL DYA+D RAPTPTGAAE AVPV+ + + L E L + + Sbjct: 242 PLISAVGHETDTTLIDYASDYRAPTPTGAAEKAVPVRMDMLNWLRQQEGILTRAMTGALT 301 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L L +ALP SD + +R RLD L L + + R+ Sbjct: 302 MRAQRLADLSRALPRSDALMEPARQRLDLAGLRLAPALASRTKDARAQLDRLAARLDP-A 360 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + + R + E+ + ++ +++ + + ++ R + + Sbjct: 361 LDRAVARKRLALGERAAGLTPARLANVVRQGRRDLDRLTV-RLDPQRLTARTSKMEERLG 419 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + R + ++ ++ R+ ++ Y TL RGY I+ + +T K + Sbjct: 420 QARARFAQAANLSVRKRREALDSLDRLRRTLGYTETLGRGYAVIRAGED-VLTSKAAASA 478 Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F DG+ T K K + QG LF Sbjct: 479 HAAMEIQFSDGRLGVTPTG-------ATPKAVKKAPKAKLPKDQGSLF 519 >gi|59711243|ref|YP_204019.1| exodeoxyribonuclease VII large subunit [Vibrio fischeri ES114] gi|81311004|sp|Q5E765|EX7L_VIBF1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|59479344|gb|AAW85131.1| exonuclease VII, large subunit [Vibrio fischeri ES114] Length = 449 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 137/496 (27%), Positives = 238/496 (47%), Gaps = 57/496 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS SGH Y +LKD+ +++ ++ Sbjct: 5 SNPRIFTVSRLNAEVRLLLENEMGIVWLVGEISNLTV-PVSGHWYLTLKDSQAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++ F P+ G + LV +++ + YQ+IIES+ P G G L ++ K L Sbjct: 64 KGNNRRVNFKPQNGKQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFDQLKMSLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P PK + +ITS TGA + DIL + R P L ++I+P VQG Sbjct: 124 EGLFAQTAKKSLPEQPKRVGIITSQTGAALFDILHVLKRRDPNLPIVIYPTMVQGSGAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E DI+I+ RGGGS+EDLW FN+E++ R IA S IPI+SA+G Sbjct: 184 QIAQAIGRANSRNE------CDILIVGRGGGSLEDLWCFNEEIVARTIAASEIPIVSAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ ++ + + RLN+ + R + ++ +L+ Sbjct: 238 HEIDVTIADFVADVRAPTPSAAAELVSRDLSAQLQTVAHQKRRLNSAMERYLSHQQRSLS 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + + L+ RLD L + L ++++ + R+ ++ R+ + I Sbjct: 298 AYQHRIEKQHPQMQLNNQSQRLDDLNQRLMNHIQQRLQRQQYRVENLTLRLNNLSPTKRI 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +++ HI E ++ + Sbjct: 358 SQDKLHIEELKRRLL--------------------------------------------- 372 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + +++ L + + TL RGY+ + + IT + + I Sbjct: 373 --DSMDRNLLMQRHQLALAAEKLDTVSPLATLMRGYSITHNQDGKIITSTKQVELGDNIT 430 Query: 487 INFFDGQANAIVINKA 502 F DG + V + Sbjct: 431 TRFADGDITSTVTKAS 446 >gi|91225132|ref|ZP_01260354.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 12G01] gi|91190075|gb|EAS76346.1| exodeoxyribonuclease VII large subunit [Vibrio alginolyticus 12G01] Length = 443 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 139/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 5 TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P G + LV +++ + YQ+IIES+ P G G L E+ K KL Sbjct: 64 RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K P+P PK + VITS TGA + DIL + R P L V+I+P VQG++ Sbjct: 124 EGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 184 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H +L+ + +L + + + + Sbjct: 238 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ L + L +LD L L+ + I + + R++ + + + Sbjct: 298 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRAMSRFIALRQQRIERQHYRLQLNSPVTRL 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + +Q + Sbjct: 358 AEQKSKLERVEQKL---------------------------------------------- 371 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + K+ + ++I L + + TLKRGY+ Q ITQ ++ + ++ Sbjct: 372 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 430 Query: 487 INFFDGQANAIV 498 +G + V Sbjct: 431 TRLAEGDVRSTV 442 >gi|315300488|gb|EFU59717.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 16-3] Length = 458 Score = 378 bits (971), Expect = e-102, Method: Composition-based stats. Identities = 141/510 (27%), Positives = 230/510 (45%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTHQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 ++ DG + V ++ K Sbjct: 429 LITRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|229844440|ref|ZP_04464580.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 6P18H1] gi|229812689|gb|EEP48378.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 6P18H1] Length = 439 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 140/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + + YSVS+L+ + I+E N + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSNNIYSVSQLNSAARQILEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + R+K + L + + Sbjct: 294 QLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAMLRQFENTQQKFTALSVRLKQNPLPYQV 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++Q + + + Sbjct: 354 QRHQQRLEQLKVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVKQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|262395111|ref|YP_003286965.1| exodeoxyribonuclease VII large subunit [Vibrio sp. Ex25] gi|262338705|gb|ACY52500.1| exodeoxyribonuclease VII large subunit [Vibrio sp. Ex25] Length = 443 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 139/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 5 TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P G + LV +++ + YQ+IIES+ P G G L E+ K KL Sbjct: 64 RGNNRRVTFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K P+P PK + VITS TGA + DIL + R P L V+I+P VQG++ Sbjct: 124 EGLFAQTNKQPLPEHPKRVGVITSKTGAALYDILDVLKRRDPSLPVVIYPTVVQGEDAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 184 QIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H +L+ + +L + + + + Sbjct: 238 HEVDVTIADFVADVRAPTPSAAAELVSRDNSHKDQALVTRQHKLASAMRYYLAQQKQQSA 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ L + L +LD L L+ + I + + R++ + + + Sbjct: 298 QLVHRLERQHPSYRLQRQTQQLDELDMRLQRAMSRFIALRQQRIERQHYRLQLNSPVTRL 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + +Q + Sbjct: 358 AEQKSKLERVEQKL---------------------------------------------- 371 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + K+ + ++I L + + TLKRGY+ Q ITQ ++ + ++ Sbjct: 372 -MDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGKVITQSSDVKSGDVLI 430 Query: 487 INFFDGQANAIV 498 +G + V Sbjct: 431 TRLAEGDVRSTV 442 >gi|319403786|emb|CBI77370.1| exodeoxyribonuclease VII large subunit [Bartonella rochalimae ATCC BAA-1498] Length = 477 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 208/530 (39%), Positives = 303/530 (57%), Gaps = 54/530 (10%) Query: 1 MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ F +K+ + + E+SVSE++ LK IVE +V VRGEISGYRG+H+SGHAYF+LKD Sbjct: 1 MDLFLEKSVATNAAEFSVSEIAGALKRIVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEG+E + +GK+TT+ GSSKYQIII+SL P+G G L+T Sbjct: 61 DKARLEAVIWRGVIEKLQFPPEEGMEVVAVGKLTTYQGSSKYQIIIDSLEPTGVGALMTL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKK +EGLF + K +P++P++I V+TSPTGAVIRDI+ RIS RFPL + ++PV Sbjct: 121 LENRKKKFADEGLFDEAKKKKLPYMPRVIGVVTSPTGAVIRDIIHRISDRFPLHIFVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A AI N L +PD+II+ARGGGS+EDLW FNDE +VRA++ S Sbjct: 181 RVQGETSGQEVAAAIAGFNALPLESAISKPDLIIVARGGGSLEDLWGFNDEAVVRAVSVS 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK L++ L +L R R Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKFDLETHLASLSLRFRVGAARY 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+++++ LP +DQ + R D + L+ L + +K +F ++ R+ Sbjct: 301 FSFYKQKLSTVVRGLPTADQLFALPRRSFDEISSRLQRALCVNYDKKRFYFYTLVIRLSP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L N +K +Q+ E + Sbjct: 361 RLL--NTKKAQQNTKEYTVRLHHAFL---------------------------------- 384 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + + R+L+S +Y++ L+RG+ N I + Sbjct: 385 -------------RNVEKKRAQIKMAFRLLKSTSYQSILERGFVLALGQENKPIKRLAQF 431 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG+ N N + K+ + QG LF Sbjct: 432 PKTGQISLRFFDGEINVSTCN----SVSKSVPKPKKRLKQWQDDDQGTLF 477 >gi|300940244|ref|ZP_07154842.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 21-1] gi|300454940|gb|EFK18433.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 21-1] Length = 455 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 142/507 (28%), Positives = 229/507 (45%), Gaps = 57/507 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKKA 455 >gi|161612734|ref|YP_001586699.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|189037842|sp|A9N216|EX7L_SALPB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|161362098|gb|ABX65866.1| hypothetical protein SPAB_00433 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] Length = 449 Score = 378 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 143/499 (28%), Positives = 228/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI + IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIIGRGGGSLEDLWSFNDERVARAIFANRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|309972444|gb|ADO95645.1| Exodeoxyribonuclease VII, large subunit [Haemophilus influenzae R2846] Length = 439 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E N S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGNFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + +L L+ + + F + +R+K + L + + Sbjct: 294 QLTLRLYNQHPQNQLRAQQAKNAQLTHRLQLAMLRQFENTQQKFTALSSRLKQNPLPYRV 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++Q + + Q Sbjct: 354 QRHQQRLEQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDLIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIMSKV 438 >gi|145636335|ref|ZP_01792004.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittHH] gi|145270500|gb|EDK10434.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittHH] Length = 442 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 144/494 (29%), Positives = 238/494 (48%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ + I+E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA Sbjct: 181 TAEIVQMIELANLRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L+ L + L + + ++L L+ + + F + R+K + L + Sbjct: 295 LKQLILRLQNQHPQNQLRAQQAKNEQLAHRLQLAMLRQFENTQQKFTALSVRLKQNPLPY 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 IQ+++QH+ + Q Sbjct: 355 RIQRHQQHLEQLQVR--------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + F ++ ++ ++ L + L RGY+ ++ I +++ Sbjct: 370 --LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENLQGKAIVSVKDVNQGDL 427 Query: 485 ILINFFDGQANAIV 498 I DG+ + V Sbjct: 428 ITTQVADGKIVSKV 441 >gi|110642671|ref|YP_670401.1| exodeoxyribonuclease VII large subunit [Escherichia coli 536] gi|300998062|ref|ZP_07181922.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 200-1] gi|123343752|sp|Q0TEX9|EX7L_ECOL5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|110344263|gb|ABG70500.1| exodeoxyribonuclease VII large subunit [Escherichia coli 536] gi|300304041|gb|EFJ58561.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 200-1] gi|324011222|gb|EGB80441.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 60-1] Length = 458 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 140/510 (27%), Positives = 230/510 (45%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKTLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASLIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGALLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|218548057|ref|YP_002381848.1| exodeoxyribonuclease VII large subunit [Escherichia fergusonii ATCC 35469] gi|226696187|sp|B7LKD2|EX7L_ESCF3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|218355598|emb|CAQ88209.1| exonuclease VII, large subunit [Escherichia fergusonii ATCC 35469] Length = 455 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 140/506 (27%), Positives = 230/506 (45%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQLKKTLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + R I S IP++SA Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARGIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTLRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + + + + + Sbjct: 356 KIHRAQTRVQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + T L++ + +TL RGY+ + + Q + + Sbjct: 374 -----NLRAQLSAMRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKK 454 >gi|323977312|gb|EGB72398.1| exodeoxyribonuclease VII [Escherichia coli TW10509] Length = 455 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q KNP+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQFKNPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTTLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + T L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNTVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V ++ + Sbjct: 429 LTTRLGDGVVISEVSAVTKSRKPRKR 454 >gi|167549470|ref|ZP_02343229.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205325347|gb|EDZ13186.1| exodeoxyribonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 449 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 144/499 (28%), Positives = 227/499 (45%), Gaps = 57/499 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPVGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF QHK P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQHKQPLPSPAHGVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANARGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE I + + + R+ Sbjct: 296 FTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + Sbjct: 356 RIHRAQSRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + ++ L++ + TL RGYT TN + + + + Sbjct: 371 --MTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTNGKVLKKIKQVKAGDI 428 Query: 485 ILINFFDGQANAIVINKAP 503 + DG + V + P Sbjct: 429 MTTRLEDGWLESEVKSVTP 447 >gi|229846484|ref|ZP_04466592.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 7P49H1] gi|229810577|gb|EEP46295.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 7P49H1] Length = 442 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 143/494 (28%), Positives = 236/494 (47%), Gaps = 57/494 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ + I+E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSATRQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 121 AAEGLFAQNLKKNLPHFSKAVGLITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA Sbjct: 181 TAEIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K Sbjct: 235 VGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQR 294 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L + + ++L L+ + + F + R+K + L + Sbjct: 295 LKQLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPY 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 IQ+ +Q + + + Sbjct: 355 RIQRYQQGLEQLKVR--------------------------------------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + F ++ ++ C ++ L + L RGY+ ++ I +++ Sbjct: 370 --LNFCVNRQVTECQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDF 427 Query: 485 ILINFFDGQANAIV 498 I DG+ + V Sbjct: 428 ITTQVADGKIVSKV 441 >gi|269103268|ref|ZP_06155965.1| exodeoxyribonuclease VII large subunit [Photobacterium damselae subsp. damselae CIP 102761] gi|268163166|gb|EEZ41662.1| exodeoxyribonuclease VII large subunit [Photobacterium damselae subsp. damselae CIP 102761] Length = 448 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 137/501 (27%), Positives = 237/501 (47%), Gaps = 57/501 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F+Q ++ ++VS L+ ++ ++E+ + V + GE+S + + SGH YF+LKD Sbjct: 1 MTMFAQPTQSNNRIFTVSTLNAQVRVLLENEMGIVWLVGELSNF-SMPVSGHWYFTLKDA 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ F P G + LV +++ + YQ+IIES+ P G G L Sbjct: 60 RAQVKCAMFKGNNRRVLFKPSNGTQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K L EGLF+ K P+P PK + +ITS TGA + DIL + R P L ++I+P Sbjct: 120 EQLKMSLAAEGLFAQSIKKPLPEQPKRVGIITSKTGAALFDILNVLRRRDPGLPIVIYPT 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ IA AI + N+ KE D++I+ RGGGS+EDLW FN+E++ R I S Sbjct: 180 MVQGEGSAISIAQAIGRANSRKE------CDVLIVGRGGGSLEDLWAFNEEIVARTIVAS 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+ H ++ + +LN+ + Sbjct: 234 EIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQAITQKKQQLNHAMRYY 293 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 I + L L + L+ + LD L L ++ + + + I ++ Sbjct: 294 IAKQQQQTQRLQHRLERQHPQMRLNQQQQHLDELTGHLHQAMQRKLTQADQRVERINYKL 353 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 I++ H+ + ++ + Sbjct: 354 SLYSPSQTIKQLSHHLAQSERRL------------------------------------- 376 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + + +++ L++ + T+ RGY+ Q + + I Sbjct: 377 ----------TDAMDRSQLTARHQLAMMAEKLEAVSPLATIARGYSITQKEDGSVIRSSE 426 Query: 478 NLATKTRILINFFDGQANAIV 498 ++T R++ G+ +IV Sbjct: 427 QVSTGDRLVTKVAQGEIRSIV 447 >gi|145634607|ref|ZP_01790316.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittAA] gi|145268152|gb|EDK08147.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittAA] Length = 439 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 142/492 (28%), Positives = 234/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGKFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAT 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + R+K + L + I Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++QH+ + Q Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|258627195|ref|ZP_05721983.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM603] gi|258580497|gb|EEW05458.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM603] Length = 446 Score = 377 bits (968), Expect = e-102, Method: Composition-based stats. Identities = 139/496 (28%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRSVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + +IA AI + N+ E D++I+ RGGGS+EDLW FN E++ R IA S+IPII Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASNIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQQH 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L + L + +LD L LE + + + + + + ++I+ + Sbjct: 295 TQFARIQHKLDKQHPQARLERQQQQLDELSLRLEQKMHQRLATQQQRSDRLSHKIQLNSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 H I++ R ++L+++Q + Q+ Sbjct: 355 THLIRQQRFNLLQQEQRLTQL--------------------------------------- 375 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + H + +++ + + + + TL RGY+ + + Q + Sbjct: 376 --------IQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTAQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|306814424|ref|ZP_07448586.1| exodeoxyribonuclease VII large subunit [Escherichia coli NC101] gi|222034217|emb|CAP76958.1| exodeoxyribonuclease 7 large subunit [Escherichia coli LF82] gi|305851818|gb|EFM52270.1| exodeoxyribonuclease VII large subunit [Escherichia coli NC101] gi|312947083|gb|ADR27910.1| exodeoxyribonuclease VII large subunit [Escherichia coli O83:H1 str. NRG 857C] gi|324008514|gb|EGB77733.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 57-2] Length = 458 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 140/510 (27%), Positives = 228/510 (44%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+ VQGD+ Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|68249000|ref|YP_248112.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 86-028NP] gi|81336588|sp|Q4QNE5|EX7L_HAEI8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|68057199|gb|AAX87452.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 86-028NP] Length = 439 Score = 377 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E N S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGNFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKTLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + R+K + L + I Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+ +Q + + + Sbjct: 354 QRYQQGLEQLKVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|297581165|ref|ZP_06943089.1| exodeoxyribonuclease VII [Vibrio cholerae RC385] gi|297534481|gb|EFH73318.1| exodeoxyribonuclease VII [Vibrio cholerae RC385] Length = 446 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 143/496 (28%), Positives = 241/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQLEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E +IA AI + NT E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 EAAIQIAQAIGRANTRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + + + ++I+ Sbjct: 295 TQFARLQYKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRRDRLSHKIELHSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R ++++++Q I Q Sbjct: 355 IHLIRQQRFNLIQQEQRINQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + + +++ + L + + TL RGY+ + T + Q + Sbjct: 375 -------SIQRYLIQSRHQLALLSEKLDAVSPLATLARGYSVTRTTQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|83647623|ref|YP_436058.1| exodeoxyribonuclease VII large subunit [Hahella chejuensis KCTC 2396] gi|123531576|sp|Q2SCJ1|EX7L_HAHCH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|83635666|gb|ABC31633.1| exodeoxyribonuclease VII, large subunit [Hahella chejuensis KCTC 2396] Length = 444 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 152/499 (30%), Positives = 240/499 (48%), Gaps = 60/499 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ S + +SV+EL+ ++ ++E + V V GEIS + SSGH YFSLKD+ Sbjct: 1 MSELSPHS-----PFSVTELNRQVRRLLEVSFMQVWVTGEISNF-SCPSSGHWYFSLKDD 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ ++ P +G + K++ + G ++Q+I ES+ +G G L A Sbjct: 55 KAQVRCAMFRNRNMFVKQRPRDGEAVTLRAKVSLYEGRGEFQLIAESMELAGEGELRRAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K KL EGLF + K P+P +PK + VITSPTGA +RDIL + RFP + V++FPV Sbjct: 115 EELKLKLSREGLFEESRKRPLPAMPKQVGVITSPTGAAVRDILTVLERRFPAIPVLLFPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E I AI N L D++I+ RGGGS+EDLW FN+E + RAIA S Sbjct: 175 PVQGKEAGPAIVAAIASANRLNC------CDVLIVGRGGGSLEDLWAFNEEPVARAIAAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP++SA+GHETD T+AD ADLRAPTP+ AAE P + + + E RL+ RL Sbjct: 229 AIPVVSAVGHETDITIADLVADLRAPTPSAAAEKVSPDQAEWKHRFLIYEQRLDAAAQRL 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ + LN L L + + L S RLD L L + ++ + H+ +R+ + Sbjct: 289 LRQEGLRLNQLRGRLKHPGRRLQESAQRLDDLEVRLHRQAQNLLSVRRNQLTHLRDRLLA 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +++ + ++ V LR Sbjct: 349 SSPRQSLKNRYATVDALNHRLQTAVLSVLR------------------------------ 378 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + +++ + TL RGY + D N I ++ + Sbjct: 379 -----------------HKSQHFAKLCGHMEAVSPIATLARGYAIVSDENGQIIRSEKEV 421 Query: 480 ATKTRILINFFDGQANAIV 498 T ++ DG+ + V Sbjct: 422 RTGQKVKARLSDGEIHCEV 440 >gi|49474517|ref|YP_032559.1| exodeoxyribonuclease VII large subunit [Bartonella quintana str. Toulouse] gi|81827591|sp|Q6FZ30|EX7L_BARQU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|49240021|emb|CAF26437.1| Exodeoxyribonuclease large subunit [Bartonella quintana str. Toulouse] Length = 475 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 212/530 (40%), Positives = 309/530 (58%), Gaps = 56/530 (10%) Query: 1 MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 MN F +K + + E+SVSE++ LK +VE +V VRGEISGYRG H+SGH YFSLKD Sbjct: 1 MNLFFEKTEATNVAEFSVSEIAGALKRVVEERFGYVRVRGEISGYRGAHASGHVYFSLKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEG+E + +GK+TT+PGSSKYQI+IE+L P+G G L+T Sbjct: 61 DKARLEAVIWRGIMEKLKFPPEEGMEVIAVGKLTTYPGSSKYQIVIEALEPTGVGALMTL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKKL +EGLF + K P+P++P+II V+TSPTGAVIRDI+ RIS RFPL ++++PV Sbjct: 121 LENRKKKLADEGLFDEAKKKPLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQGD +E+A+A+ N L G P+PD+II+ARGGGS+EDLW FNDE +VRA+ S Sbjct: 181 RVQGDTSGREVADALKGFNALPFGGLVPKPDLIIVARGGGSLEDLWGFNDEAVVRAVYES 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 ++P+ISA+GHETDWTL DY AD RAPTPTGAAE AVPVK L+ + +L ARL + R Sbjct: 241 ALPVISAVGHETDWTLIDYVADWRAPTPTGAAERAVPVKLDLEVQVASLGARLRMGLARY 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L +L++ LP DQ + R D + L+ L + +K +F+ + R+ Sbjct: 301 FDFHQQKLRALVRGLPTVDQLFALPRRGFDEISSRLQRALCVSCDKKRFYFHGLNLRLSP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L N +K ++ E + + Sbjct: 361 RLL--NTEKELRNTKEYTARLHR------------------------------------- 381 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + + +R+L+S +Y+N L+RG+ +N I + Sbjct: 382 ----------AFVRNVEKQRAQLEVASRLLKSTSYQNILERGFVLALGPDNKLIKRLVQF 431 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG+ + ++ + + KQ QG LF Sbjct: 432 PETGQINLRFFDGEMSV------SARDHGLNRSSKSKRIKSKQDDQGTLF 475 >gi|145638692|ref|ZP_01794301.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittII] gi|145272287|gb|EDK12195.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae PittII] gi|309750185|gb|ADO80169.1| Exodeoxyribonuclease VII, large subunit [Haemophilus influenzae R2866] Length = 439 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E + S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + R+K + L + + Sbjct: 294 QLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYQV 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++QH+ + Q Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFCVNRQVAERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|329114737|ref|ZP_08243494.1| Exodeoxyribonuclease 7 large subunit [Acetobacter pomorum DM001] gi|326695868|gb|EGE47552.1| Exodeoxyribonuclease 7 large subunit [Acetobacter pomorum DM001] Length = 484 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 165/502 (32%), Positives = 259/502 (51%), Gaps = 30/502 (5%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 S + PE++VSE+S ++ +E S V VRGEI+ + SGH YFSLKD +I Sbjct: 8 PSASNNVPEFTVSEISGAIRRTLEGTFSRVRVRGEITELKRYP-SGHVYFSLKDERGKIS 66 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++W+G+++++ +PE G+E + GKI+ + S YQ+++E + +G G LL +E+ + Sbjct: 67 GVVWRGSVSRLGLVPENGVEIIATGKISAYGERSSYQLVVERMEYAGEGALLARIERLRL 126 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 KL EEGLF K IP +P++I V+TSP GAV+ DI + RFP VI++PV VQG+ Sbjct: 127 KLAEEGLFDTARKKAIPLLPRVIGVVTSPQGAVLHDICTTLQRRFPRPVIVWPVPVQGEG 186 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 IA AI + L PRPD++I+ARGGGS+EDL FNDE +VRA A IP+IS Sbjct: 187 AAARIAAAIDGFSQLDGLGAVPRPDVLIVARGGGSLEDLMAFNDEAVVRATAACLIPLIS 246 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TL D+A+D RAPTPT AAEMAVPV+ L + + + AR + RL++ Sbjct: 247 AVGHETDTTLIDFASDRRAPTPTAAAEMAVPVRTELLADIEHRNARAVGALSRLLQTARL 306 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L+ A+P+ L +R +LD R L+ L ++ R+ + + + Sbjct: 307 RLDRASSAMPDLPSLLQTARMQLDDRGRRLDVALPALVQRRKADLVAVERHMPAV----- 361 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + + + + A L LR Sbjct: 362 ----ETLLAGRRTRLAVLANMLQASMAHTFQRQDARLGRLRISPAP-------------- 403 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L ++ T+++ L++ + + L RGY + +T L R+ Sbjct: 404 -----LQALVRERRTALAGIAGQLEAISPRAVLARGYALVT-AEGRPVTSAEQLNDGERV 457 Query: 486 LINFFDGQANAIVINKAPPKEQ 507 + F DG A++ + +Q Sbjct: 458 ELTFGDGARPAVIGDGTHRPKQ 479 >gi|218708649|ref|YP_002416270.1| exodeoxyribonuclease VII large subunit [Vibrio splendidus LGP32] gi|218321668|emb|CAV17622.1| Exodeoxyribonuclease VII, large subunit [Vibrio splendidus LGP32] Length = 492 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 137/505 (27%), Positives = 238/505 (47%), Gaps = 58/505 (11%) Query: 6 QKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 S+ +P ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 41 DSASMTNPNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQV 99 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +++G ++ F P+ G + LV +++ + YQ+IIES+ P G G L EK K Sbjct: 100 KCAMFRGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGKLQQEFEKLK 159 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 L EGLF+ K +P PK + VITS TGA + DIL + R P L VI++P VQG Sbjct: 160 MNLAAEGLFAQSSKQILPEHPKCVGVITSKTGAALFDILDVLKRRDPSLPVIVYPTMVQG 219 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +IA AI + N E D++I+ RGGGS+EDLW FN+E++ R IA S IPI Sbjct: 220 EGASIQIAQAIGRANERNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPI 273 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHE D T+AD+ AD+RAPTP+ AAE+ H + + + +RL + I ++ + Sbjct: 274 ISAVGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKEQAYASKRSRLVSAIRHVLIKQ 333 Query: 304 INTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + +L L + L +LD L L + + + + ++++ + Sbjct: 334 AQSTQTLKYRLEKQHPSYQLQKQSQQLDDLDMRLRRGMTQYLKQHAQRVERKQHQLQLNS 393 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + + + + H+ +Q Sbjct: 394 PVKRLGEQKLHLQRSEQ------------------------------------------- 410 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 ++ + + + +++ L++ + TLKRGY+ ++ ++ ++ Sbjct: 411 ----KLLDAMDKTLLTTRHQLAMAAEKLETVSPLATLKRGYSITHSASSKTVSSINDVEI 466 Query: 482 KTRILINFFDGQANAIVINKAPPKE 506 I DG + V + E Sbjct: 467 GEVITTQVEDGVIESQVTTRVAKSE 491 >gi|333001706|gb|EGK21272.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-218] Length = 447 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 144/498 (28%), Positives = 232/498 (46%), Gaps = 57/498 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + T Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428 Query: 485 ILINFFDGQANAIVINKA 502 + DG + V + Sbjct: 429 LTTRLEDGWIESEVKTSS 446 >gi|331658650|ref|ZP_08359594.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA206] gi|331054315|gb|EGI26342.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA206] Length = 458 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 139/510 (27%), Positives = 227/510 (44%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS T A + DIL + R P L VII+ VQGD+ Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTSAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|333002304|gb|EGK21868.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-272] Length = 447 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 143/498 (28%), Positives = 231/498 (46%), Gaps = 57/498 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELSNQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKA 502 + DG + V + Sbjct: 429 LTTRLEDGWIESEVKTSS 446 >gi|329122272|ref|ZP_08250860.1| exodeoxyribonuclease VII large subunit [Haemophilus aegyptius ATCC 11116] gi|327473833|gb|EGF19250.1| exodeoxyribonuclease VII large subunit [Haemophilus aegyptius ATCC 11116] Length = 439 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E + S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQMRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + R+K + L + + Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYQV 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++QH+ + Q Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|16272346|ref|NP_438559.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae Rd KW20] gi|260580540|ref|ZP_05848368.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae RdAW] gi|1169574|sp|P43913|EX7L_HAEIN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|1573368|gb|AAC22056.1| exodeoxyribonuclease VII, large subunit (xseA) [Haemophilus influenzae Rd KW20] gi|260092882|gb|EEW76817.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae RdAW] Length = 439 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 140/492 (28%), Positives = 232/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E N + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKTLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + R+K + L + I Sbjct: 294 QLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+ +Q + + + Sbjct: 354 QRYQQGLEQLKVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|261212134|ref|ZP_05926420.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC341] gi|260838742|gb|EEX65393.1| exodeoxyribonuclease VII large subunit [Vibrio sp. RC341] Length = 446 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 140/496 (28%), Positives = 241/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K +P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKALPENPRCVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + +IA AI + N E D++I+ RGGGS+EDLW FN E++ R IA S IPII Sbjct: 181 DAAIQIAQAIGRANARAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASEIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASAMRHYLAQQD 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE ++ + + + + + ++I+ + Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRSDRLSHKIQLNSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 IH I++ R +++ ++QH+ Q ++ H Sbjct: 355 IHQIRQQRFNLIRQEQHMNQSIQHH----------------------------------- 379 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + +++ + L + + TL RGY+ + + + Sbjct: 380 ------------LIHARHRLALLSEKLDAVSPLATLARGYSVTRTAQGELVRYGNQVKAG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLIDGEIVSTV 443 >gi|145630430|ref|ZP_01786211.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae R3021] gi|144984165|gb|EDJ91602.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae R3021] Length = 439 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 143/492 (29%), Positives = 236/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + I+E + S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAT 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANLRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ L + L + + ++L L+ + + F + R+K + L + I Sbjct: 294 QLILRLQNQHPQNQLRAQQAKNEQLAHRLQLAMLRQFENTQQKFTALSVRLKQNPLPYRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++QH+ + Q Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFCVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENLQGKAIVSVKDVNQGDLIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|325578755|ref|ZP_08148802.1| exodeoxyribonuclease VII large subunit [Haemophilus parainfluenzae ATCC 33392] gi|325159579|gb|EGC71711.1| exodeoxyribonuclease VII large subunit [Haemophilus parainfluenzae ATCC 33392] Length = 439 Score = 376 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E + S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSENIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRGAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+IIES+ P+G G L E K KL Sbjct: 60 RMKNLRVGFRPQNGMQVLVRANVSLYEPRGDYQLIIESMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + ++TS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKSLPDFAKAVGIVTSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSNLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + RL + R+ ++ L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQQELLQQLAYKQQRLEMALDRIFSHQQQRLQ 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + R ++L L ++ + + + + R+K + L + + Sbjct: 294 QLRLRLQNQHPQNQLLMQKARTEQLHHRLVLAMQRQMDKTQQKLTALSARLKQNPLPYRL 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 QK Q++ + Q Sbjct: 354 QKQSQYLAQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ ++ L + L RGY+ +D + I + + T I Sbjct: 367 LNLGANRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAEDVKGHAIVSVKQVKTGDTIK 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TKVADGEITSRV 438 >gi|26248870|ref|NP_754910.1| exodeoxyribonuclease VII large subunit [Escherichia coli CFT073] gi|227887541|ref|ZP_04005346.1| exodeoxyribonuclease VII large subunit [Escherichia coli 83972] gi|300981968|ref|ZP_07175814.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 45-1] gi|301047138|ref|ZP_07194234.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 185-1] gi|31563152|sp|Q8FF64|EX7L_ECOL6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|26109276|gb|AAN81478.1|AE016764_160 Exodeoxyribonuclease VII large subunit [Escherichia coli CFT073] gi|227835891|gb|EEJ46357.1| exodeoxyribonuclease VII large subunit [Escherichia coli 83972] gi|300300940|gb|EFJ57325.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 185-1] gi|300408863|gb|EFJ92401.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 45-1] gi|307554529|gb|ADN47304.1| exonuclease VII, large subunit [Escherichia coli ABU 83972] gi|315292454|gb|EFU51806.1| exodeoxyribonuclease VII, large subunit [Escherichia coli MS 153-1] Length = 458 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 140/510 (27%), Positives = 228/510 (44%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+ VQGD+ Sbjct: 122 QAEGLFELQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + DG + V ++ K Sbjct: 429 LTTRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|218690624|ref|YP_002398836.1| exodeoxyribonuclease VII large subunit [Escherichia coli ED1a] gi|254783701|sp|B7MYD7|EX7L_ECO81 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|218428188|emb|CAR09103.2| exonuclease VII, large subunit [Escherichia coli ED1a] Length = 458 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 140/510 (27%), Positives = 229/510 (44%), Gaps = 57/510 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+ VQGD+ Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYSTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + ++ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTRQLVQQNPQS 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKVGET 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQL 514 ++ DG + V ++ K Sbjct: 429 LITRLGDGVVISEVSAVTKTRKSRKKTSNP 458 >gi|319406793|emb|CBI80426.1| exodeoxyribonuclease VII large subunit [Bartonella sp. 1-1C] Length = 477 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 210/530 (39%), Positives = 308/530 (58%), Gaps = 54/530 (10%) Query: 1 MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ F +K+ + + E+SVSE++ LK IVE +V VRGEISGYRG+H+SGHAYF+LKD Sbjct: 1 MDLFLEKSVATNVAEFSVSEIAGALKRIVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEG+E + +GK+TT+ GSSKYQIII+SL P+G G L+T Sbjct: 61 DKARLEAVIWRGVVEKLQFPPEEGMEVVAVGKLTTYQGSSKYQIIIDSLEPTGVGALMTL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKK +EGLF + K +P++P++I V+TSPTGAVIRDI+ RIS RFPL ++++PV Sbjct: 121 LENRKKKFADEGLFDEAKKKKLPYMPRVIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A AI N L +PD+II+ARGGGS+EDLW FNDE +VRA++ S Sbjct: 181 RVQGETSGQEVAAAIAGFNALPLENAISKPDLIIVARGGGSLEDLWGFNDEAVVRAVSVS 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK L++ L +L R R Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAEKAVPVKFDLETHLASLSLRFRVGAARY 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+++++ LP +DQ + R D + L+ L + +K +F ++ R+ Sbjct: 301 FSFYKQKLSAVVRGLPTADQLFALPRRSFDEISSRLQRALCVNYDKKRFYFYTLVIRLSP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L N +K +Q+ E + ++ Sbjct: 361 RLL--NTKKAQQNTKEYTVRLHHAFLRN-------------------------------- 386 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ T + +T R+L+S +Y++ L+RG+ + N I + Sbjct: 387 ---------------VEKKRTQIKMTFRLLKSTSYQSILERGFVLALEQENKPIKRLAQF 431 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG+ N N K+ + QG LF Sbjct: 432 PKTGQISLRFFDGKINVSTCN----SVSKNVPKPKKRLKQWQDDDQGTLF 477 >gi|149190082|ref|ZP_01868359.1| exodeoxyribonuclease VII large subunit [Vibrio shilonii AK1] gi|148836112|gb|EDL53072.1| exodeoxyribonuclease VII large subunit [Vibrio shilonii AK1] Length = 437 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 150/489 (30%), Positives = 236/489 (48%), Gaps = 57/489 (11%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77 S L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ +++G ++ Sbjct: 2 SRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMFRGNNRRVT 60 Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137 F P G + LV +++ + YQ+IIES+ P G G L EK K L EGLF+ Sbjct: 61 FKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEKLKMSLAAEGLFAQTL 120 Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196 K P+P PK + +ITS TGA + DIL + R P L V+I+P VQGD EIA AI + Sbjct: 121 KQPLPSHPKRVGIITSKTGAALFDILDVLKRRDPSLPVVIYPTTVQGDNAAIEIAQAIGR 180 Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256 N+ E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GHE D T+A Sbjct: 181 ANSRNE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVGHEIDVTIA 234 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL-- 314 DY AD+RAPTP+ AAE+ H + SLI E RL NII + + L+SL++ L Sbjct: 235 DYVADVRAPTPSAAAELVSNDTSHKRESLITREQRLRNIIRLYLSEQKQRLSSLMQDLSN 294 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + L RLD L ++ + ++ + ++R+K + + + + Sbjct: 295 QHPKHHLQRQSQRLDEFEYRLNAAMKQRLSQETLRLTNKLHRLKLQSPVTRLAQQSHRLT 354 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + +EQ + + Sbjct: 355 QFESRLEQ-----------------------------------------------AMQRQ 367 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 + S ++T L + + TLKRGY+ QD + I+ ++ + + G Sbjct: 368 LSSTKHKFALTVGKLDTVSPLATLKRGYSITQDEDGKVISHVDSVEIGSTMTTQVEHGTL 427 Query: 495 NAIVINKAP 503 + V + P Sbjct: 428 VSTVTDIKP 436 >gi|262165077|ref|ZP_06032814.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM223] gi|262024793|gb|EEY43461.1| exodeoxyribonuclease VII large subunit [Vibrio mimicus VM223] Length = 446 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 140/496 (28%), Positives = 242/496 (48%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 2 SSSLANRNIYTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSQAQVK 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++KG + F P+ G + LV +++ + YQII+ES+ P G G L E+ K Sbjct: 61 CAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIILESMQPEGDGRLQQQFEQLKM 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF+ K P+P P+ + +ITS TGA + DIL + R P L V+I+P VQG+ Sbjct: 121 QLAAEGLFAQTRKKPLPENPRSVGIITSRTGAALHDILHVLKRRDPNLPVVIYPTLVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + +IA AI + N+ E D++I+ RGGGS+EDLW FN E++ R IA S+IPII Sbjct: 181 DAAIQIAQAIGRANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASNIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD+ AD+RAPTP+ AAE+ H Q +L +A+L + + + + Sbjct: 235 SAVGHEIDVTIADFVADVRAPTPSAAAELVSRDNRHKQQALHQWQAKLASGMRHYLAQRH 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + L + +LD L LE + + + + + + ++I+ + Sbjct: 295 TQFARLQHKLDKQHPQARLERQQQQLDELSLRLEQKMHQRLTVQQQRSDRLSHKIQLNSP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 H I++ R ++L+++Q + Q Sbjct: 355 THLIRQQRFNLLQQEQRLTQ---------------------------------------- 374 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + H + +++ + + + + TL RGY+ + + Q + Sbjct: 375 -------SIQHHLIQSRHQLALLSEKMDAVSPLATLARGYSVTRTVQGELVRQSAQVKPG 427 Query: 483 TRILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 DTLVTQLMDGEILSTV 443 >gi|333016515|gb|EGK35846.1| exodeoxyribonuclease VII, large subunit [Shigella flexneri K-304] Length = 447 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 143/498 (28%), Positives = 231/498 (46%), Gaps = 57/498 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 E LF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAECLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTSVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRTQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + T Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKTGEM 428 Query: 485 ILINFFDGQANAIVINKA 502 + DG + V + Sbjct: 429 LTTRLEDGWIESEVKTSS 446 >gi|319775674|ref|YP_004138162.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae F3047] gi|319898081|ref|YP_004136278.1| exodeoxyribonuclease vii large subunit [Haemophilus influenzae F3031] gi|317433587|emb|CBY81971.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae F3031] gi|317450265|emb|CBY86481.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae F3047] Length = 439 Score = 375 bits (963), Expect = e-101, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 235/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E N + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 60 RMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSTLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K +L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQSLK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + ++L L+ + + F + R+K + L + + Sbjct: 294 QLTLRLQNQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLPYQV 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+++QH+ + Q Sbjct: 354 QRHQQHLEQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + F ++ ++ ++ L + L RGY+ ++ I +++ I Sbjct: 367 LNFSINRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGDFIT 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TQVADGKIVSKV 438 >gi|152979434|ref|YP_001345063.1| exodeoxyribonuclease VII large subunit [Actinobacillus succinogenes 130Z] gi|150841157|gb|ABR75128.1| exodeoxyribonuclease VII, large subunit [Actinobacillus succinogenes 130Z] Length = 448 Score = 375 bits (963), Expect = e-101, Method: Composition-based stats. Identities = 143/500 (28%), Positives = 233/500 (46%), Gaps = 57/500 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + YSVS+L++ K ++E L V + GEIS + SGH Y +LKD +S++ A +++ Sbjct: 3 NANIYSVSQLNHAAKMLLEGQLGLVWLTGEISNF-SQPVSGHWYLTLKDENSQVRAAMFR 61 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ F P+ GI+ LV ++ + YQ+IIES+ P+G G L E+ K KL E Sbjct: 62 MKNMRVGFRPQNGIQVLVRAAVSLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKMKLAAE 121 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ K +P K + VITSPTGA ++DIL + R P L+V+I+P VQG E E Sbjct: 122 GLFAQNLKKNLPHFCKTVGVITSPTGAALQDILHILKRRDPNLKVVIYPCAVQGKEAAGE 181 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I N +E D++I+ RGGGS+EDLW FN+E + RAI +S++P+ISA+GH Sbjct: 182 IVEMIELANVRRE------VDVLIVGRGGGSLEDLWCFNEEAVARAIFDSTLPVISAVGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD T+AD+ AD+RAPTP+ AAE+ ++ L+ L RL+ + R+I + L Sbjct: 236 ETDVTIADFVADVRAPTPSAAAELVSRNQDELRQQLNYKRQRLDMALDRIISLQHQRLQR 295 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L+ L + L+ R L + L + ++ + + R++ + L + +Q Sbjct: 296 LILRLQNQHPQNQLNIQSQRTALLTQRLTAAITRLMEKNRNKLTALATRLRQNPLPYRVQ 355 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 K Q++ + + Sbjct: 356 KQCQYMEQLHAR-----------------------------------------------L 368 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 F + + + ++ L + L RGY+ Q+ +T + + Sbjct: 369 NFAVENNLSVRRHKLANLCGKLDGLSPLKVLARGYSIAQNEQGIAVTSIAQIRPDETLRT 428 Query: 488 NFFDGQANAIVINKAPPKEQ 507 DG + + Sbjct: 429 QVADGIIESRISKIKKKARS 448 >gi|332087956|gb|EGI93081.1| exodeoxyribonuclease VII, large subunit [Shigella boydii 5216-82] Length = 456 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + +ITS TGA + DIL + R P L II+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGMITSKTGAALHDILHVLKRRDPSLPAIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + +I Sbjct: 356 KIHRAQTRIQQLEYRLAEI----------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ + + + + Sbjct: 375 ------LRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDRIVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|114797378|ref|YP_759647.1| exodeoxyribonuclease VII large subunit [Hyphomonas neptunium ATCC 15444] gi|114737552|gb|ABI75677.1| exodeoxyribonuclease VII, large subunit [Hyphomonas neptunium ATCC 15444] Length = 475 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 183/528 (34%), Positives = 266/528 (50%), Gaps = 60/528 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P + +HPE +VSEL+ LK +E+N V VRGE+ G I SGH Y LKD+ Sbjct: 8 QPMPDSPTTNHPELTVSELAASLKRTIETNYDQVTVRGEL-GRVTIAKSGHMYADLKDDK 66 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + ++ I+W+G ++++ F PEEG+E + G+++T+ G S YQ+I ++ P+G+G L+ LE Sbjct: 67 AVLNTIMWRGQVDRLTFRPEEGLEVVATGRLSTYEGRSAYQMIASTMRPAGAGALMQLLE 126 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 +RKKKL EGLF HK PIP++P+ I VITSPTGAVIRDIL RI RFP+RVI++P V Sbjct: 127 ERKKKLAAEGLFDQAHKKPIPYMPRTIGVITSPTGAVIRDILHRIRERFPVRVIVWPALV 186 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG++ ++ I N + RPD++I+ARGGGSIEDLW FN+E++VRA S I Sbjct: 187 QGEQAASQVTAGIRGFNAMTGAD---RPDVLIVARGGGSIEDLWPFNEEVVVRAAFESEI 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETD TL DY +D RAPTPTGAAE+AVPV+ L + RL + R + Sbjct: 244 PLISAVGHETDTTLIDYVSDRRAPTPTGAAEIAVPVRTELMLGIEESGQRLKRALTRALS 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + LP + L R RLD L + R + + + Sbjct: 304 --RSRDKLAAARLPRPESLLQSKRQRLDFASASLPRAALALTQRARLKLSRLQ--LSPAT 359 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L I+ RQ + + + Sbjct: 360 LKAEIRGQRQRLRDTAVRARPALM------------------------------------ 383 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 I +++ ++L++ +Y+ TLKRGY ++DT + T Sbjct: 384 -----------RLIDQKKAALTSEGKLLETLSYQATLKRGYVIVRDTGGQLVRNAAQAQT 432 Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG A AP + + ++G QG LF Sbjct: 433 LDTLRVTFADGDITA-----APFEGETPPPAPKPKPAPRRKGEQGNLF 475 >gi|37678958|ref|NP_933567.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus YJ016] gi|37197700|dbj|BAC93538.1| exonuclease VII, large subunit [Vibrio vulnificus YJ016] Length = 461 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 145/495 (29%), Positives = 238/495 (48%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ L V + GEIS + SGH YF+LKD+ +++ Sbjct: 20 SSLTNPNIFTVSRLNSEVRLLLENQLGIVWLVGEISNFSA-PVSGHWYFTLKDSMAQVKC 78 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G + F P G + LV +++ + YQ+IIES+ P G G L + K K Sbjct: 79 AMFRGNNRLVSFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDALKMK 138 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K IP PK + +ITS TGA + DIL + R P L V+I+P VQG+E Sbjct: 139 LASEGLFAQSSKQAIPEHPKCVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTLVQGEE 198 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS Sbjct: 199 AAIQIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIIS 252 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ ADLRAPTP+ AAE+ H +LI+ E +L + + Sbjct: 253 AVGHEIDVTIADFVADLRAPTPSAAAELVSRDNSHKDQALISREQKLRAAWRHYLTEQNR 312 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 T+ SL L + L + D L L+ +E + ++ + + + ++++ + Sbjct: 313 TIVSLSHRLEKQHPRYRLMRQTQQADELQIRLQRAMEKYLAQREQKVSRVQHKLQLLSPV 372 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + + +Q + + Sbjct: 373 RQISEQKNALARVEQKMMDAM--------------------------------------- 393 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 K+ ++I L + + TLKRGY+ Q + IT++ + T Sbjct: 394 --------DRKLLRLRHQIAIAAEKLDTVSPLATLKRGYSITQSESGEVITRQSQIKTGD 445 Query: 484 RILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 446 TLVTRLSDGEIRSTV 460 >gi|163853273|ref|YP_001641316.1| exodeoxyribonuclease VII, large subunit [Methylobacterium extorquens PA1] gi|163664878|gb|ABY32245.1| exodeoxyribonuclease VII, large subunit [Methylobacterium extorquens PA1] Length = 522 Score = 375 bits (962), Expect = e-101, Method: Composition-based stats. Identities = 202/549 (36%), Positives = 284/549 (51%), Gaps = 68/549 (12%) Query: 2 NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 P + PE+SV +L+ LK +E HV +RGEI+GYRG H SGHAYFSLKD Sbjct: 21 EPAPSAVLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++IDA++WKG L ++ P+EG+E + GKITTF G S YQI+I+S+ P+G G + L Sbjct: 81 SAKIDAVVWKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF K PIPF+P++I V+TSPTGAVIRDIL R+ RFP V+++PV+ Sbjct: 141 EERKRQLAAEGLFETDRKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +EIA AI N L PRPD++I+ARGGGSIEDLW FN+E +VRA A S Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+ L + + L AR ++R I Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRTELSAQIHELGARQAGTMLRRI 320 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + +L++A+P +D L+ R RLD + + Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L N + +R+ + + + R + E A L + + + + + Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + T +L + +YK L RGY ++D + + A Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSAAAAA 453 Query: 481 TKTRILINFFDGQANAIVIN-----KAPPKEQPTKKCQLHNNKRE--------------- 520 R + F DG A APP + + R Sbjct: 454 RAARFQLQFADGAIFARPEEAPDDPVAPPLAEAPPSPRPKRAPRRAAPEPAPKPEKAAAE 513 Query: 521 KQGTQGELF 529 QG LF Sbjct: 514 PAARQGSLF 522 >gi|89094125|ref|ZP_01167068.1| exodeoxyribonuclease VII large subunit [Oceanospirillum sp. MED92] gi|89081600|gb|EAR60829.1| exodeoxyribonuclease VII large subunit [Oceanospirillum sp. MED92] Length = 452 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 142/493 (28%), Positives = 234/493 (47%), Gaps = 55/493 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SVSEL+ + ++E + + V GEIS + SSGH YF+LKD+ +++ ++ Sbjct: 11 TSNHALSVSELNRQARLLLERSFLTIEVTGEISNFV-KPSSGHWYFTLKDDKAQVRCAMF 69 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K I F P++G + +V K++ + G YQ+I E + G G+L A E+ K KL + Sbjct: 70 KNRNQLIRFSPKQGDQVVVRAKVSLYEGRGDYQLICEFMSQDGGGSLQAAYEELKLKLNQ 129 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++HK P+P P I V+TSPTGA I DIL + RFP L V ++P VQG++ P Sbjct: 130 EGLFGNEHKKPLPEHPARIGVVTSPTGAAIHDILTVLKRRFPGLPVTLYPTAVQGEDAPA 189 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I AI+ +E D++I+ RGGGS+EDLW FN E + R I + IP+ISA+G Sbjct: 190 QICKAIILAEAHQE------CDVLIVGRGGGSLEDLWPFNTEPVARTIFDCEIPVISAVG 243 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D ++DY AD+RAPTP+ AAE+ P + L+ L RL + +I+ N + Sbjct: 244 HEVDTVISDYVADVRAPTPSAAAELISPDQHQLKLRLRQQSERLQRQLNSVIQDANNRIY 303 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 +L L + Q L RLD L L+ ++ + + ++ R++++ + + Sbjct: 304 NLKSRLRHPGQQLREKAQRLDHLEIRLQQAAQLSLSGRKCRIENLRTRLQANTPQQRLLQ 363 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + I + + Q + ++ ++ Sbjct: 364 HSERIKNFKSRLAQGILH--------------------------------KLEFNRQQLN 391 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + + TL+RGY +QD +T + + +I Sbjct: 392 KA---------------AAQLNTVSPLATLERGYAIVQDQQGKVLTDTHDSSVGDQIEAR 436 Query: 489 FFDGQANAIVINK 501 G+ + Sbjct: 437 LHQGRMKCTINEI 449 >gi|323971078|gb|EGB66326.1| exodeoxyribonuclease VII [Escherichia coli TA007] Length = 447 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 142/498 (28%), Positives = 230/498 (46%), Gaps = 57/498 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ N + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKA 502 + DG + V + Sbjct: 429 LTTRLEDGWIESEVKTSS 446 >gi|84387647|ref|ZP_00990664.1| exodeoxyribonuclease VII large subunit [Vibrio splendidus 12B01] gi|84377492|gb|EAP94358.1| exodeoxyribonuclease VII large subunit [Vibrio splendidus 12B01] Length = 448 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 136/500 (27%), Positives = 234/500 (46%), Gaps = 57/500 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 2 TNPNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P+ G + LV +++ + YQ+IIES+ P G G L EK K L Sbjct: 61 RGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGKLQQEFEKLKMNLAA 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P PK + VITS TGA + DIL + R P L VI++P VQG+ Sbjct: 121 EGLFAQSSKQILPEHPKCVGVITSKTGAALFDILDILKRRDPSLPVIVYPTMVQGEGASI 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 181 QIAQAIGRANERDE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H + + + ARL + I ++ + + Sbjct: 235 HEIDVTIADFVADMRAPTPSAAAELVSRDNSHKEQAYASKRARLVSAIRHVLIKQAQSTQ 294 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 +L L + L +LD L L + + + + ++++ + + + Sbjct: 295 TLKYRLEKQHPSYQLQKQSQQLDDLDMRLRRGMTQYLKQHAQRVERKQHQLQLNSPVKRL 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + H+ +Q + Sbjct: 355 GEQKLHLQRSEQ-----------------------------------------------K 367 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + + +++ L++ + TLKRGY+ ++ ++ ++ I Sbjct: 368 LLDAMDKTLLTTRHQLAMAAEKLETVSPLATLKRGYSITHSASSKTVSSINDVEVGEVIT 427 Query: 487 INFFDGQANAIVINKAPPKE 506 DG + V E Sbjct: 428 TQVEDGVIESQVTTSVAKSE 447 >gi|126668435|ref|ZP_01739392.1| exodeoxyribonuclease VII, large subunit [Marinobacter sp. ELB17] gi|126627144|gb|EAZ97784.1| exodeoxyribonuclease VII, large subunit [Marinobacter sp. ELB17] Length = 449 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 153/499 (30%), Positives = 226/499 (45%), Gaps = 56/499 (11%) Query: 4 FSQKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 + P SVSEL++ +H++E++ V V GE+SG+ SSGH YFSLKD + Sbjct: 1 MNDAFQDTRPRALSVSELNHQARHLLETSFMQVWVEGELSGF-SRPSSGHWYFSLKDRNC 59 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I +++G ++ P+EG + GK+T + +QII+E L P+G+G L A E Sbjct: 60 QIRCAMFRGANQRVRPAPKEGELVRIRGKVTLYENRGDFQIIVEHLEPAGAGALQQAFEA 119 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K KL EGLFS + K PIP +P+ I V+TSPTGA I DIL ++ R P + V ++P V Sbjct: 120 LKLKLFNEGLFSTERKKPIPALPRHIGVVTSPTGAAIHDILTVLARRCPGIPVTLYPTAV 179 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +I AI + R D++I+ RGGGS+EDLW FN+E + RAIA I Sbjct: 180 QGQAATADIVAAIGRAVA------HNRADVLIIGRGGGSLEDLWCFNEEAVARAIAACPI 233 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 +SA+GHE D T+ADY ADLRAPTP+ AAE P + L + RL + R Sbjct: 234 ATVSAVGHEVDTTIADYVADLRAPTPSAAAEKISPDQSIWLRQLQAISERLQAAMGRQHT 293 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 N L L L + ++L RLD L L + + R + +H+ R+ Sbjct: 294 ALENRLLQLSTRLKDPRRSLQEKAQRLDGLDLRLSRAMAQLTQRLHMRTDHLQQRLAMQS 353 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + + +L + Sbjct: 354 PNRQLASAGERVLRATTGLNLA-------------------------------------- 375 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 I+ L + + T + L + TL RGY ++D + L Sbjct: 376 -----IQQALKSR----REQLDYTAQTLNLVSPLATLGRGYAIVKDDQGKIVRHAGQLEA 426 Query: 482 KTRILINFFDGQANAIVIN 500 I +G +A V + Sbjct: 427 GQAISARVANGTVHAQVTS 445 >gi|90579807|ref|ZP_01235615.1| exodeoxyribonuclease VII large subunit [Vibrio angustum S14] gi|90438692|gb|EAS63875.1| exodeoxyribonuclease VII large subunit [Vibrio angustum S14] Length = 449 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 137/502 (27%), Positives = 238/502 (47%), Gaps = 57/502 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M FS ++ + Y+VS L+ ++ ++E+ + V + GE+S + + SGH YF+LKD+ Sbjct: 1 MTTFSPQSQTNSRIYTVSSLNAQVRLVLENEMGVVWLIGELSNF-SMPVSGHWYFTLKDS 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG+ + F P G + LV +++ + YQ+IIES+ P G G L Sbjct: 60 RAQVKCAMFKGSNRHVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K L EGLF+ K +P PK + +ITS TGA + DILQ + R P L ++I+P Sbjct: 120 EQLKMSLAAEGLFAQSLKQTLPEQPKRVGIITSKTGAALHDILQVLQRRDPSLPIVIYPT 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ IA AI + N +E D++I+ RGGGS+EDLW FN+E++ R IA S Sbjct: 180 MVQGEGSAISIAQAIGRANARQE------CDVLIIGRGGGSLEDLWAFNEEIVARTIAAS 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+ H L + +L + I Sbjct: 234 QIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQLLDRKKQQLRHAIRSY 293 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L L + L+ + LD + + L ++ I + +H + +I Sbjct: 294 LSQSLRQATQLQHRLERQHPQLRLNQQQQHLDEISQRLIQAMQKKIQKHQQHIDSNNYKI 353 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + ++++ ++ Sbjct: 354 SLYSPATLVSNAQRNLERSERR-------------------------------------- 375 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L K+ + +++ L++ + TL RGY+ ++ + I Sbjct: 376 ---------LYDALDRKLLNAKHKLAVAAEKLETVSPLATLARGYSITRNEQGDVIRNTS 426 Query: 478 NLATKTRILINFFDGQANAIVI 499 + +++ DG ++ +I Sbjct: 427 QVKHGDKLITTVTDGDIHSCII 448 >gi|118580820|ref|YP_902070.1| exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM 2379] gi|118503530|gb|ABL00013.1| Exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM 2379] Length = 475 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 161/527 (30%), Positives = 255/527 (48%), Gaps = 64/527 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ FS+K +VS L+ L+ ++E N V V+GE+S + SSGH YFSLKD+ Sbjct: 1 MDLFSEKI-----ILTVSRLTSLLRDVLEENFQQVWVQGEVSNFSS-PSSGHFYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++KG ++F P +G+ + G+I+ + YQ+I E L P+G G L A Sbjct: 55 GAQLRCVMFKGAARNLKFRPGDGMALIARGRISVYDQRGDYQLICEYLEPAGVGALQAAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 ++ K++L EGLF HK +PF P+ + VITS TGA I DIL + RF L ++++PV Sbjct: 115 QQLKERLAREGLFDQAHKRHLPFFPRRLGVITSATGAAIHDILNVLRRRFASLEILLYPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ EIA A+ ++N L+ D++I+ RGGGS+EDLW FN+E++ RA+ S Sbjct: 175 RVQGEGAGLEIARAVEEMNRLQMA------DVLIVGRGGGSLEDLWAFNEEVLARALYRS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHETDWT+AD+ ADLRAPTP+ AAE+ V + L+ + LE RL + Sbjct: 229 AIPVISAVGHETDWTIADFVADLRAPTPSAAAELVVASADELRGRVEGLEHRLGLAMESR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + SL + L + TL R+D L LE L + R F+ + + Sbjct: 289 LSTLESRVASLRRLLADPSATLGHLAQRVDDLTERLELGLHNGVMRLKERFDRLDRLLMQ 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + +++ RQ +L H E Sbjct: 349 HSPLARVEQLRQRLLLLVSHGE-------------------------------------- 370 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRN 478 + +++ + L+ + TL RGY+ + + I+ Sbjct: 371 ---------RSMLLRLEGDKQAFGAAAARLEVLSPLATLSRGYSITSRQQDGRVISDASQ 421 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQ 525 L + + G A+ V P E K H + E Q Sbjct: 422 LKMGELLDVRLRHGAAHCRVEGVQLPTE---PKPLTHADDSEILSDQ 465 >gi|260582339|ref|ZP_05850132.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae NT127] gi|260094707|gb|EEW78602.1| exodeoxyribonuclease VII, large subunit [Haemophilus influenzae NT127] Length = 443 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 142/495 (28%), Positives = 235/495 (47%), Gaps = 58/495 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ + I+E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSAARQILEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLHVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K +P K + +ITS TGA ++DIL ++ R P L+VII+P VQG E Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHILARRDPSLKVIIYPTAVQGKEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN-DEMIVRAIANSSIPIIS 245 EI I N +E D++I+ RGGGS+EDLW FN +E + RAI S++PIIS Sbjct: 181 TAEIVQMIELANVRQE------VDVLIVGRGGGSLEDLWCFNEEEEVARAIFRSTLPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + + RL+ RL K Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQ 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L + L + + ++L L+ + + F + +R+K + L Sbjct: 295 RLKQLALRLHNQHPQNQLRAQQAKNEQLTHRLQLAMLRQFENTQQKFTALSSRLKQNPLP 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + +Q+++Q + + Q Sbjct: 355 YRVQRHQQRLEQLQVR-------------------------------------------- 370 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + ++ ++ ++ L + L RGY+ ++ I +++ Sbjct: 371 ---LNICVNRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAENPQGKAIVSVKDVNQGD 427 Query: 484 RILINFFDGQANAIV 498 I DG+ + V Sbjct: 428 FITTQVADGKIVSKV 442 >gi|323156163|gb|EFZ42322.1| exodeoxyribonuclease VII, large subunit [Escherichia coli EPECa14] Length = 456 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P + AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQTVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + ++ Sbjct: 356 KIHRAQTRIQQLEYRLAETLRV-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + L++ + +TL R Y+ T+ N + + + + Sbjct: 378 ---------QLSATRERFGNAVTHLEAVSPLSTLAREYSVTTATDGNVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWIESEVKNIQPVKKSRKK 454 >gi|170767575|ref|ZP_02902028.1| exodeoxyribonuclease VII, large subunit [Escherichia albertii TW07627] gi|170123909|gb|EDS92840.1| exodeoxyribonuclease VII, large subunit [Escherichia albertii TW07627] Length = 457 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 142/504 (28%), Positives = 230/504 (45%), Gaps = 57/504 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + SSGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEQEMGQVWISGEISNF-SQPSSGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQFKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANIRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSAQQRLEMAMDYYLANRARR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + + + +I R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTALERLQKRMSFALENQLKQANQQQQRLIQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +I + + I + + Sbjct: 356 HIHRAQTRIQQLEYR--------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + L ++ L++ + +TL RGY+ + + + Q + + Sbjct: 371 --LTETLRAQLGDTRERFGNAVTHLEAVSPLSTLARGYSVTSAADGSVLKQVKQVKAGDT 428 Query: 485 ILINFFDGQANAIVINKAPPKEQP 508 + DG + V ++ Sbjct: 429 LTTRLGDGVVVSEVSAVKRSRKPR 452 >gi|296282929|ref|ZP_06860927.1| exodeoxyribonuclease VII large subunit [Citromicrobium bathyomarinum JL354] Length = 491 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 187/526 (35%), Positives = 262/526 (49%), Gaps = 49/526 (9%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + SVS+LS LK +VE V +RGE+SG + +SGH Y SLKD+ S Sbjct: 15 ANSRPGDNSEPLSVSDLSRSLKRVVEDRFGFVRIRGELSGVK-RAASGHLYCSLKDDKSV 73 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID ++WK ++ F PE+G+E + GK+TT+ G SKYQI+IE + +G G LL LEK Sbjct: 74 IDGVMWKSAAPRLAFRPEDGVEVIASGKVTTYAGRSKYQIVIERMELAGEGALLALLEKT 133 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K +L EGLF+D K P+PF+P+ I V+TSPTGAVIRDIL R+S RFP VI++PV VQG Sbjct: 134 KARLEAEGLFADARKKPLPFLPRTIGVVTSPTGAVIRDILHRLSDRFPSHVIVWPVVVQG 193 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + +++ A+ N L+ G RPD++I+ARGGGSIEDLW FN+E +VRAIA S IP+ Sbjct: 194 ETAKGQVSAAVRGFNALERGGAIARPDLLIVARGGGSIEDLWAFNEEEVVRAIAESEIPV 253 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TLAD+AAD RAPTPT AAE AVPV+ L + + +L AR R + Sbjct: 254 ISAVGHETDTTLADFAADHRAPTPTAAAERAVPVRAELAAGIADLGARQMRCATRPVALG 313 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + + LP D L + LD L + R+ L Sbjct: 314 RERLEACSQRLPRPDALLQAAAQALDDAIERHRRALVDRVAIGRATLGEAAARLSPATLN 373 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + R+ R+ ++ L Sbjct: 374 WRLGQARE----------------------------------------RLEHVRLMPATL 393 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 TR ++ +L+S L+RGY + D + + T Sbjct: 394 TTRHARATER--------LAANVAMLRSLDPDAPLQRGYAMVFDGQGALVRSAGDARTAG 445 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG+ A + PP P + QG+LF Sbjct: 446 TLSLKFADGRVAASTGDAPPPPATPAPAPKPRRKSPPPPSGQGDLF 491 >gi|152976584|ref|YP_001376101.1| exodeoxyribonuclease VII large subunit [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189037856|sp|A7GSJ8|EX7L_BACCN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|152025336|gb|ABS23106.1| exodeoxyribonuclease VII, large subunit [Bacillus cytotoxicus NVH 391-98] Length = 451 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 155/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE+G++ LV GKI+ + S YQI + + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPEDGMKVLVKGKISVYEASGSYQIYVHDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K PIP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSRVYKQPIPAYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGEFA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA Sbjct: 180 APSIVQAIQTAN------EMNDIDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+AVP +Q ++ RL + ++ + Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNILEMQEKVLQRTLRLQRAMREIVHKRQER 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L +L K+ Q +LDR +L E + +K + ++ Sbjct: 294 LQTLQKSYAFRYPRQIYEQKEEQLDRALEQLVLAKERYMEKKVNQLKQLSFYLEKHHPAQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I Q+ + + Sbjct: 354 RISQTKIAIETLQKQLRRE----------------------------------------- 372 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + +++ + + L++ + + RGY + N + ++++ Sbjct: 373 ------MQTVLQTKEFAFVRIAKQLEALSPLKVMMRGYGLVYSEKNQVLKSVKDVSAGDV 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V + Sbjct: 427 VSVQLQDGILDCNVSSVK 444 >gi|319408943|emb|CBI82600.1| exodeoxyribonuclease VII large subunit [Bartonella schoenbuchensis R1] Length = 471 Score = 374 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 212/530 (40%), Positives = 309/530 (58%), Gaps = 60/530 (11%) Query: 1 MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ FS + + + E+SVSE+S LK I+E +++ VRGEISGYRG+H+SGHAYF+LKD Sbjct: 1 MDLFSPRPVATNVAEFSVSEVSSALKRIIEDKFAYIRVRGEISGYRGVHASGHAYFALKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+ + K++F PEEG+E + +GK+TT+PGSSKYQI+I++L P+G G L+T Sbjct: 61 DKARLEAVIWRSLMEKLKFPPEEGMEVIAVGKLTTYPGSSKYQIVIDALEPTGVGALMTL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKKL +EGLF + K P+P++P+II V+TSPTGAVI DI+ RIS RFPL ++++PV Sbjct: 121 LENRKKKLADEGLFDEAKKRPLPYMPQIIGVVTSPTGAVIHDIIHRISDRFPLHILVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A AI N L G +PD+II+ARGGGS+EDLW FNDE +VRA+ S Sbjct: 181 RVQGETSGREVACAIEGFNALPLGGVLLKPDLIIVARGGGSLEDLWGFNDEAVVRAVHAS 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHETDWTL DYAAD RAPTPTGAAE AVPVK L+ L +L ARL + R Sbjct: 241 TIPVISAVGHETDWTLIDYAADWRAPTPTGAAERAVPVKIDLEVQLASLGARLRAGLTRY 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L ++ + L +DQ L+ R D + L+ L I +K +F + R Sbjct: 301 FSFHQQKLRAISRGLLTADQLLALPRRGFDEISSRLQRALCISYEKKLFYFRALSVRFSP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L N +K R ++ H+ + Sbjct: 361 RLL--NSEKARYNVKGYTIHLRRAFL---------------------------------- 384 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + R+L+S +Y+N L+RG+ +N + + L Sbjct: 385 -------------RNVEKQRAQAEMAFRLLKSTSYQNILERGFVLALGQDNKPVKRLVQL 431 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 R+ + FFDG+ N +N A + ++++ QG LF Sbjct: 432 PKTGRMSLRFFDGEINVSTLNCA----------SKNKRIKQQKDDQGTLF 471 >gi|86145602|ref|ZP_01063932.1| exodeoxyribonuclease VII large subunit [Vibrio sp. MED222] gi|85836573|gb|EAQ54699.1| exodeoxyribonuclease VII large subunit [Vibrio sp. MED222] Length = 448 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 136/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 2 TNPNIFTVSRLNSEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P+ G + LV +++ + YQ+IIES+ P G G L EK K L Sbjct: 61 RGNNRRVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGKLQQEFEKLKMNLAA 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P PK + VITS TGA + DIL + R P L VI++P VQG+ Sbjct: 121 EGLFAQSSKQILPEHPKCVGVITSKTGAALFDILDVLKRRDPSLPVIVYPTMVQGEGASI 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 181 QIAQAIGRANERNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H + + + ARL + I ++ + + Sbjct: 235 HEVDVTIADFVADMRAPTPSAAAELVSRDNSHKEQAYASKRARLVSAIRHVLIKQAQSTQ 294 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 +L L + L +LD L L + + + + ++++ + + + Sbjct: 295 TLKYRLEKQHPSYQLQKQSQQLDDLDMRLRRGMTQYLKQHAQRVERKQHQLQLNSPVKRL 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + H+ +Q + Sbjct: 355 GEQKLHLQRSEQ-----------------------------------------------K 367 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + + +++ L++ + TLKRGY+ ++ ++ ++ I Sbjct: 368 LLDAMDKTLLTTRHQLAMAAEKLETVSPLATLKRGYSITHSASSKTVSSINDVEIGEVIT 427 Query: 487 INFFDGQANAIVINKAPPKE 506 DG + V + E Sbjct: 428 TQVEDGVIESQVTTRVAKSE 447 >gi|89073114|ref|ZP_01159653.1| exodeoxyribonuclease VII large subunit [Photobacterium sp. SKA34] gi|89051067|gb|EAR56524.1| exodeoxyribonuclease VII large subunit [Photobacterium sp. SKA34] Length = 449 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 139/502 (27%), Positives = 238/502 (47%), Gaps = 57/502 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M FS ++ + Y+VS L+ ++ ++E+ + V + GE+S + + SGH YF+LKD+ Sbjct: 1 MTTFSPQSQKNSRIYTVSSLNAQVRLVLENEMGVVWLIGELSNF-SMPVSGHWYFTLKDS 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG+ + F P G + LV +++ + YQ+IIES+ P G G L Sbjct: 60 RAQVKCAMFKGSNRHVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K L EGLF+ K +P PK + +ITS TGA + DILQ + R P L ++I+P Sbjct: 120 EQLKMSLAAEGLFAQSLKQTLPEQPKRVGIITSKTGAALHDILQVLQRRDPSLPIVIYPT 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ IA AI + N +E D++I+ RGGGS+EDLW FN+E++ R IA S Sbjct: 180 MVQGEGSAISIAQAIGRANARQE------CDVLIVGRGGGSLEDLWAFNEEIVARTIAAS 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHE D T+AD+ AD+RAPTP+ AAE+ H L + +L + I Sbjct: 234 QIPIVSAVGHEVDVTIADFVADVRAPTPSAAAELISRDMTHQTQLLARKKQQLRHAIRSY 293 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L L + L+ + LD + + L ++ I + +H + +I Sbjct: 294 LSQSLRQATQLQHRLERQHPQLRLNQQQQHLDEISQRLVQAMQKKIQKHQQHIDSNNYKI 353 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 I ++++ ++ Sbjct: 354 SLYSPATLISNAQRNLERSERR-------------------------------------- 375 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L K+ + +++ L++ + TL RGY+ ++ + I Sbjct: 376 ---------LYDALDRKLLNAKHKLAVIAEKLETVSPLATLARGYSITRNEQGDVIRNTS 426 Query: 478 NLATKTRILINFFDGQANAIVI 499 + +++ DG ++ VI Sbjct: 427 QVKHGDKLITTVTDGDIHSSVI 448 >gi|312173193|emb|CBX81448.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora ATCC BAA-2158] Length = 457 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 142/513 (27%), Positives = 234/513 (45%), Gaps = 59/513 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 SQ + ++VS L+ ++ ++E + V + EIS + SSGH YF+LKD+ ++ Sbjct: 1 MSQAPGSN--IFTVSRLNSTVRKLLELEMGQVWLSAEISNF-SQPSSGHWYFTLKDDSAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ ++ F P+ G + LV IT + YQ+I ES++P+G G L E+ Sbjct: 58 VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMLPAGDGLLQQQFEQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K++L+ EGLF +HK P+P + + VITS +GA + D+L+ + R P L V+I+P VQ Sbjct: 118 KQRLMAEGLFEQRHKQPLPDPARQVGVITSASGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E P I AI N E D++I+ RGGGS+EDL FNDE + RAI S IP Sbjct: 178 GAEAPPGIVRAIELANARNE------CDVLIVGRGGGSLEDLCSFNDERVARAIFASRIP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQTERLRQLQSQQQRMEMAMDYYLAR 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + T L L L +R + +L R L L+ + + R H+ R+ + Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMQLQRRLGDALQQHLRQATRRQQHLGQRLNAF 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I++ Q + + Q + Q ++ Sbjct: 352 RPELRIERASQQLQQWQYRLRQAMQ----------------------------------- 376 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ + L+ + TL RG++ + + + R L Sbjct: 377 ------------QQLGANKQRFGQLAARLEGVSPLATLARGFSVTSTADGQLVKKTRQLH 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 + DG + V P K+ + + Sbjct: 425 QGDTLKTRLDDGWVESEVTVITPLKKTRGRSVK 457 >gi|218532089|ref|YP_002422905.1| exodeoxyribonuclease VII large subunit [Methylobacterium chloromethanicum CM4] gi|218524392|gb|ACK84977.1| exodeoxyribonuclease VII, large subunit [Methylobacterium chloromethanicum CM4] Length = 523 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 201/550 (36%), Positives = 285/550 (51%), Gaps = 69/550 (12%) Query: 2 NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 P + PE+SV +L+ LK +E HV +RGEI+GYRG H SGHAYFSLKD Sbjct: 21 EPAPSALLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++IDA++WKG L ++ P+EG+E + GKITTF G S YQI+I+S+ P+G G + L Sbjct: 81 SAKIDAVVWKGVLGRLRQKPKEGLEVVATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF + K PIPF+P++I V+TSPTGAVIRDIL R+ RFP V+++PV+ Sbjct: 141 EERKRQLAAEGLFEAERKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +EIA AI N L PRPD++I+ARGGGSIEDLW FN+E +VRA A S Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+ L + + L AR ++R I Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELAAQVHELGARQAGTMLRRI 320 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + +L++A+P +D L+ R RLD + + Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L N + +R+ + + + R + E A L + + + + + Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + T +L + +YK L RGY ++D + + A Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSAAAAA 453 Query: 481 TKTRILINFFDGQANAIVIN-----KAPPKEQPTKKCQLHNNKREK-------------- 521 R + F DG A APP + + + Sbjct: 454 RAARFQLQFADGAIFARPEEAPDDPVAPPLAEAPRSAPRPKRAPRRAAPEPAPKPEKAAA 513 Query: 522 --QGTQGELF 529 QG LF Sbjct: 514 EPAARQGSLF 523 >gi|308187761|ref|YP_003931892.1| Exonuclease VII, large subunit [Pantoea vagans C9-1] gi|308058271|gb|ADO10443.1| Exonuclease VII, large subunit [Pantoea vagans C9-1] Length = 457 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 140/508 (27%), Positives = 230/508 (45%), Gaps = 57/508 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++VS L+ ++ ++E + V + EIS + +SGH YF+LKD+ +++ + Sbjct: 4 PSTANIFTVSRLNTTVRQLLEKEMGLVWISAEISNFT-QPASGHWYFTLKDDGAQVRCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ + ++ F P+ G + LV IT + YQ+I ES+ P+G G L E K KL Sbjct: 63 FRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIAESMHPAGEGLLQQQFELLKAKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF QHK P+P + + VITS TGA + D+L+ + R P L V+I+P VQG + P Sbjct: 123 SEGLFEPQHKQPLPEPARQVGVITSSTGAALHDVLRVMHRRDPSLPVVIYPTVVQGADAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA+ Sbjct: 183 AAIVRAIEIANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L L + + RL + + + Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRLY 296 Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R + RL + L +E + + R + + +R+ + Sbjct: 297 TRLEHRLQQQHPQLRLARQQTALFRLQQRLGEAMETRLRQATRQQDRLAHRLNAQQPQQR 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ + ++Q Sbjct: 357 LFQAQKQLQSWHYRLQQS------------------------------------------ 374 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ ++ + L+ + TL RG++ DT + + L + + Sbjct: 375 -----MATQLSNNKQQFGQLVAQLEGVSPLATLARGFSVTTDTAGQVVKKTAQLQSGDLL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQ 513 DG + V P K++ K Sbjct: 430 RTRLDDGWVESQVTQLLPEKKRRRKTAS 457 >gi|301155949|emb|CBW15419.1| exonuclease VII, large subunit [Haemophilus parainfluenzae T3T1] Length = 439 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ + ++E + S + + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSENIYSVSQLNSAARQMLEGSFSQIWLTGEISNFT-QPVSGHWYLTLKDENAQVRGAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+IIES+ P+G G L E K KL Sbjct: 60 RMKNLRVGFRPQNGMQVLVRANVSLYESRGDYQLIIESMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + ++TS TGA ++DIL ++ R P L+V+I+P VQG E Sbjct: 120 EGLFAQNLKKSLPEFAKAVGIVTSSTGAALQDILHILARRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI S++PIISA+G Sbjct: 180 EIVQIIELANARQE------VDVLIVGRGGGSLEDLWCFNEEEVARAIFRSNLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + RL + R+ ++ L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQQELLQQLAYKQQRLEMALDRIFSHQQQRLQ 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + R ++L L ++ + + + + R+K + L + + Sbjct: 294 QLRLRLQNQHPQNQLLMQKARTEQLHHRLVLAMQRQVDKTQQKLTALSARLKQNPLPYRL 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 QK Q++ + Q Sbjct: 354 QKQSQYLAQLQVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ ++ L + L RGY+ +D + I + + T I Sbjct: 367 LNLGANRQVTERQNKLATLCGKLDGLSPLKVLARGYSIAEDVKGHAIVSVKQVKTGDTIK 426 Query: 487 INFFDGQANAIV 498 DG+ + V Sbjct: 427 TKVADGEITSRV 438 >gi|209694325|ref|YP_002262253.1| exodeoxyribonuclease VII large subunit [Aliivibrio salmonicida LFI1238] gi|226694633|sp|B6EGZ4|EX7L_ALISL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|208008276|emb|CAQ78421.1| exodeoxyribonuclease VII large subunit [Aliivibrio salmonicida LFI1238] Length = 444 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 138/493 (27%), Positives = 235/493 (47%), Gaps = 57/493 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GE+S SGH Y +LKD+ +++ ++ Sbjct: 5 SNPRIFTVSRLNSEVRLLLENEMGIVWLVGEVSNLTM-PVSGHWYLTLKDSQAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++ F P+ G + LV +++ + YQ+IIES+ G G L + K L Sbjct: 64 KGNNRRVTFKPQNGKQVLVKARLSLYEPRGDYQLIIESMQAEGDGRLQQEFDHLKMSLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P PK + +ITS TGA + DIL + R P L VII+P VQG Sbjct: 124 EGLFAQTAKKALPEQPKCVGIITSKTGAALFDILNVLKRRDPNLPVIIYPTLVQGTNAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E DI+I+ RGGGS+EDLW FN+E++ R IA S IPI+SA+G Sbjct: 184 QIAQAIGRANSRNE------CDILIVGRGGGSLEDLWCFNEEIVARTIAASQIPIVSAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ + + + RL + I R + + L+ Sbjct: 238 HEIDVTIADFVADVRAPTPSAAAELVSRDLSSQLQIVSHQKRRLRSAIERYLSQQQKRLS 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + + L+ RLD L + LE++++ + R ++ R+ + + Sbjct: 298 TYQFRIEKQHPQLQLNTQSQRLDDLNQRLENHIQQRLERNQHKIENLSLRLSNLSPARKV 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +++Q I ++ + Sbjct: 358 HQDKQRIETLKRRLL--------------------------------------------- 372 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + +++ L + + TLKRGY+ ++ + + IT + + T I Sbjct: 373 --DSMDRNLLMQRHQLALAAEKLDTVSPLATLKRGYSITRNASGSLITSTQQVHTGDTIT 430 Query: 487 INFFDGQANAIVI 499 F DG+ + V Sbjct: 431 TRFVDGEVQSTVD 443 >gi|260914446|ref|ZP_05920915.1| exodeoxyribonuclease VII [Pasteurella dagmatis ATCC 43325] gi|260631547|gb|EEX49729.1| exodeoxyribonuclease VII [Pasteurella dagmatis ATCC 43325] Length = 457 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 148/511 (28%), Positives = 245/511 (47%), Gaps = 57/511 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ ++ ++E+ L +V + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSEQIYSVSQLNQTVRVMLENQLGYVWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ L ++ + YQ+IIES+ P+G G L E K KL Sbjct: 60 RMKNMRVNFRPQNGMQVLARASVSLYEPRGDYQLIIESMHPAGEGLLQQQFEALKMKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + ++TS TGA ++DIL + R P L+V+I+P VQG E Sbjct: 120 EGLFAQHLKKNLPHFSKAVGIVTSKTGAALQDILHILQRRDPSLKVVIYPTAVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI NS+IP+ISA+G Sbjct: 180 EIVQMIELANQRQE------VDVLIVGRGGGSLEDLWCFNEESVARAIFNSTIPVISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L RL + RL K+ L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQQELLQQLAYKRQRLEMALDRLFNDKLQYLQ 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + ++ +L L ++ ++ +K + R++ + L N+ Sbjct: 294 RLRLRLQHKHPQTQLQVQKQQMSQLSHRLVLAIKTLVNKKQDKLTALSTRVQKNPLPFNV 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 QK +Q+I + + + + Sbjct: 354 QKQQQYIHQLELRLHTM------------------------------------------- 370 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 L+ + + L + L RGY+ +D IT+ + ++ Sbjct: 371 ----LNRIVTHKQHQFANLCGRLDGLSPLKVLARGYSIAEDEQGKAITEISQVNVGDKLK 426 Query: 487 INFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 +G+ + VI+ E+ +K QL +N Sbjct: 427 TRVANGEIVSEVISIQSFLEKRSKAKQLKSN 457 >gi|127512228|ref|YP_001093425.1| exodeoxyribonuclease VII large subunit [Shewanella loihica PV-4] gi|158513470|sp|A3QCG8|EX7L_SHELP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|126637523|gb|ABO23166.1| Exodeoxyribonuclease VII large subunit [Shewanella loihica PV-4] Length = 442 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 145/491 (29%), Positives = 222/491 (45%), Gaps = 57/491 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ ++E L V + EIS + SSGH Y +LKDN+++I A ++KG Sbjct: 6 NNVYTVSRLNGEVRQLLEGELGKVWLEAEISNFSA-PSSGHWYLTLKDNYAQIRAAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ+II+S++P+G G L E K KL EG Sbjct: 65 RNRAVTFRPANGQQVLVKGAISVYEPRGDYQLIIDSMLPAGDGLLAQQYEALKMKLAAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K P+P + I V+TS TGA IRD+L + R P + VII+P +VQG+ K + Sbjct: 125 LFAADTKRPLPSNIQRIGVVTSATGAAIRDVLHVLKRRDPSIEVIIYPSQVQGEHADKSL 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +AI+Q N E D+++L RGGGS+EDLW FN E + I NS++P++SA+GHE Sbjct: 185 CHAIMQANDRME------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T++DY ADLRAPTP+ AAE+ L RL + + L Sbjct: 239 VDTTISDYVADLRAPTPSAAAELLSQDALSKADKLRMTMTRLKQGWQHYGLKQAQRFSQL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + L R D L L L + + R + R+ H + Sbjct: 299 HHRLERQDPKRRLQQYEQRFDELQLRLGAALTGKLHQMERRQQSLHARLNQVSPSHQLAL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + Q + + Sbjct: 359 AASRLTHQNQRLHSAM-------------------------------------------- 374 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ S S+ L++ + TL RGY+ DT + +++ T R+ Sbjct: 375 ---QARLNSAEKSLQYAAHQLETVSPLATLSRGYSITLDTEGKVLHSAQDVRTGARLTTK 431 Query: 489 FFDGQANAIVI 499 DG+ + VI Sbjct: 432 LVDGEVQSTVI 442 >gi|61212678|sp|Q7MNE3|EX7L_VIBVY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 443 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 145/495 (29%), Positives = 238/495 (48%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ L V + GEIS + SGH YF+LKD+ +++ Sbjct: 2 SSLTNPNIFTVSRLNSEVRLLLENQLGIVWLVGEISNFSA-PVSGHWYFTLKDSMAQVKC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G + F P G + LV +++ + YQ+IIES+ P G G L + K K Sbjct: 61 AMFRGNNRLVSFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDALKMK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K IP PK + +ITS TGA + DIL + R P L V+I+P VQG+E Sbjct: 121 LASEGLFAQSSKQAIPEHPKCVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTLVQGEE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS Sbjct: 181 AAIQIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ ADLRAPTP+ AAE+ H +LI+ E +L + + Sbjct: 235 AVGHEIDVTIADFVADLRAPTPSAAAELVSRDNSHKDQALISREQKLRAAWRHYLTEQNR 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 T+ SL L + L + D L L+ +E + ++ + + + ++++ + Sbjct: 295 TIVSLSHRLEKQHPRYRLMRQTQQADELQIRLQRAMEKYLAQREQKVSRVQHKLQLLSPV 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + + +Q + + Sbjct: 355 RQISEQKNALARVEQKMMDAM--------------------------------------- 375 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 K+ ++I L + + TLKRGY+ Q + IT++ + T Sbjct: 376 --------DRKLLRLRHQIAIAAEKLDTVSPLATLKRGYSITQSESGEVITRQSQIKTGD 427 Query: 484 RILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 TLVTRLSDGEIRSTV 442 >gi|27363888|ref|NP_759416.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus CMCP6] gi|320157266|ref|YP_004189645.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus MO6-24/O] gi|31563122|sp|Q8DF05|EX7L_VIBVU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|27360005|gb|AAO08943.1| exodeoxyribonuclease VII, large subunit [Vibrio vulnificus CMCP6] gi|319932578|gb|ADV87442.1| exodeoxyribonuclease VII large subunit [Vibrio vulnificus MO6-24/O] Length = 443 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 57/495 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + + ++VS L+ ++ ++E+ L V + GEIS + SGH YF+LKD+ +++ Sbjct: 2 SSLTNPNIFTVSRLNSEVRLLLENQLGIVWLVGEISNFSA-PVSGHWYFTLKDSMAQVKC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G + F P G + LV +++ + YQ+IIES+ P G G L + K K Sbjct: 61 AMFRGNNRLVSFKPTNGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQQFDALKMK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K IP PK + +ITS TGA + DIL + R P L V+I+P VQG+E Sbjct: 121 LASEGLFAQSSKQAIPEHPKCVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTLVQGEE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIIS Sbjct: 181 AAIQIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEIVARTIAASQIPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+AD+ ADLRAPTP+ AAE+ H +L++ E +L + + Sbjct: 235 AVGHEIDVTIADFVADLRAPTPSAAAELVSRDNSHKDQALMSREQKLRAAWRHYLTEQNR 294 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 T+ SL L + L + D L L+ +E + ++ + + + ++++ + Sbjct: 295 TIVSLSHRLEKQHPRYRLMRQTQQADELQIRLQRAMEKYLAQREQKVSRVQHKLQLLSPV 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + + +Q + + Sbjct: 355 RQISEQKNALARVEQKMMDAM--------------------------------------- 375 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 K+ ++I L + + TLKRGY+ Q + + IT++ + T Sbjct: 376 --------DRKLLRLRHQIAIAAEKLDTVSPLATLKRGYSITQSESGDVITRQSQIKTGD 427 Query: 484 RILINFFDGQANAIV 498 ++ DG+ + V Sbjct: 428 TLVTRLSDGEIRSTV 442 >gi|229192392|ref|ZP_04319355.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 10876] gi|228590969|gb|EEK48825.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 10876] Length = 452 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKMNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|229019399|ref|ZP_04176222.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1273] gi|228741869|gb|EEL92046.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1273] Length = 452 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEVVARAIFTSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+AVP LQ ++ RL + + K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNVLELQEKVLQRTLRLQRAMRERVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I Q+ +++ + Sbjct: 354 KIMQTKVAIETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQMKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V + Sbjct: 427 VSVQLQDGILDCSVSSIE 444 >gi|196041561|ref|ZP_03108853.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus NVH0597-99] gi|196027549|gb|EDX66164.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus NVH0597-99] Length = 452 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQIYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|322831778|ref|YP_004211805.1| exodeoxyribonuclease VII, large subunit [Rahnella sp. Y9602] gi|321166979|gb|ADW72678.1| exodeoxyribonuclease VII, large subunit [Rahnella sp. Y9602] Length = 457 Score = 372 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 141/508 (27%), Positives = 228/508 (44%), Gaps = 57/508 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 P ++VS L+ ++ ++E+ + V + GEIS + SSGH YF+LKD+ +++ + Sbjct: 4 PSSPPIFTVSRLNQTVRQLLENEMGQVWLSGEISNF-SQPSSGHWYFTLKDDRAQVKCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ T + F P+ G + LV IT + YQ+I ES+ +G G L + K++L Sbjct: 63 FRNTNRRTTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQEAGDGLLQQKFDLLKQQLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF Q K P+P K + VITS +GA + D+L + R P L VII+P VQG + P Sbjct: 123 AEGLFDAQFKQPLPSPAKCVGVITSASGAALHDVLNVLKRRDPSLPVIIYPTSVQGADAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+ Sbjct: 183 GQIVRAIELANAREE------VDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L + + + RL + + Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAELISRNQLELLRQIQSQQQRLEMAMDYYLAQLTQRF 296 Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R + +L R L+ ++ + + R + + R+ Sbjct: 297 TRLNHRLQQQHPHLRLARQQTALFKLRRRLDEAMQNQLRQMLRRTDRLQQRLTQQQPQPR 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + +Q + + Q ++Q Sbjct: 357 IHRAQQRVQQLQYRLQQ------------------------------------------- 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +S ++ L+ + TL RGY+ + + A + Sbjct: 374 ----AMSSQLTESRQRFGTACTQLEGVSPLATLARGYSVTTTPQGALLKKTTQTAPGDTL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQ 513 DG + V + K+ + + Sbjct: 430 KTRLADGWIESEVKSIVVEKKVRKRAVK 457 >gi|289824929|ref|ZP_06544338.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 449 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 142/489 (29%), Positives = 224/489 (45%), Gaps = 57/489 (11%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77 S L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ +++ + ++ Sbjct: 13 SRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVT 71 Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137 F P+ G + LV IT + YQII ES+ P+G G L E+ K KL EGLF QH Sbjct: 72 FRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKLHAEGLFDQQH 131 Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196 K P+P + VITS TGA + DIL + R P L VII+P VQGD+ P +I AI Sbjct: 132 KQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIEL 191 Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256 NT E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA+GHETD T+A Sbjct: 192 ANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIA 245 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D+ ADLRAPTP+ AAE+ ++ L + + + RL + + + + L Sbjct: 246 DFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQ 305 Query: 317 SDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 L +R + +RL + + LE I + + + R+ I + + I Sbjct: 306 QHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLSQQNPQPRIHRVQSRIQ 365 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + + + + Sbjct: 366 QLEYR-----------------------------------------------LTENIRSR 378 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 + L++ + TL RGYT T+ + + + + + DG Sbjct: 379 LSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWL 438 Query: 495 NAIVINKAP 503 + V + P Sbjct: 439 ESEVKSVTP 447 >gi|49480925|ref|YP_038241.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52141317|ref|YP_085513.1| exodeoxyribonuclease VII large subunit [Bacillus cereus E33L] gi|118479371|ref|YP_896522.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis str. Al Hakam] gi|196046399|ref|ZP_03113625.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB108] gi|218905316|ref|YP_002453150.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH820] gi|228929226|ref|ZP_04092253.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935503|ref|ZP_04098321.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947897|ref|ZP_04110184.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229093239|ref|ZP_04224357.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-42] gi|229123700|ref|ZP_04252895.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 95/8201] gi|229186423|ref|ZP_04313587.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BGSC 6E1] gi|81824192|sp|Q635A4|EX7L_BACCZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|81828207|sp|Q6HDY5|EX7L_BACHK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158512496|sp|A0RIH2|EX7L_BACAH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694634|sp|B7JM31|EX7L_BACC0 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|49332481|gb|AAT63127.1| exodeoxyribonuclease VII, large subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974786|gb|AAU16336.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus E33L] gi|118418596|gb|ABK87015.1| Exodeoxyribonuclease VII large subunit [Bacillus thuringiensis str. Al Hakam] gi|196022869|gb|EDX61550.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB108] gi|218539843|gb|ACK92241.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH820] gi|228597050|gb|EEK54706.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BGSC 6E1] gi|228659835|gb|EEL15480.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 95/8201] gi|228690213|gb|EEL44007.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-42] gi|228811884|gb|EEM58218.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824255|gb|EEM70069.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830516|gb|EEM76126.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 452 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|218231815|ref|YP_002368983.1| exodeoxyribonuclease VII large subunit [Bacillus cereus B4264] gi|229152382|ref|ZP_04280574.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1550] gi|226694636|sp|B7HB51|EX7L_BACC4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|218159772|gb|ACK59764.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus B4264] gi|228630990|gb|EEK87627.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1550] Length = 452 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|310764765|gb|ADP09715.1| exodeoxyribonuclease VII large subunit [Erwinia sp. Ejp617] Length = 456 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 144/511 (28%), Positives = 232/511 (45%), Gaps = 59/511 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 SQ + ++VS L+ ++ ++E + V + EIS + SSGH YF+LKD+ ++ Sbjct: 1 MSQPPGSN--IFTVSRLNSTVRKLLELEMGQVWLSAEISNF-SQPSSGHWYFTLKDDTAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ ++ F P+ G + LV IT + YQ+I ES+ P+G G L E+ Sbjct: 58 VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGDGLLQQQFEQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K++L+ EGLF HK P+P + + VITS +GA + D+L+ + R P L V+I+P VQ Sbjct: 118 KQRLMAEGLFEQAHKQPLPDPARQVGVITSSSGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E P I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP Sbjct: 178 GAEAPPGIVRAIELANVRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQIERLRQLQSQQQRMEMAMDYYLAQ 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + T L L L +R + L R L+ L+ + R R + R+ + Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMILQRRLDDALQQHLRRAARRQEILGQRLNAF 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I++ Q + + Q ++Q ++ Sbjct: 352 RPEIRIERASQQLQQWQYRLQQAMQ----------------------------------- 376 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ + L+ + TL RG++ + I + R L Sbjct: 377 ------------QQLGTGKQHFGQLAARLEGVSPLATLARGFSVTSTADGQVIKKTRQLH 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V P K+ + Sbjct: 425 RGDTLKTRLDDGWVESEVTAITPLKKTRGRS 455 >gi|30022262|ref|NP_833893.1| exodeoxyribonuclease VII large subunit [Bacillus cereus ATCC 14579] gi|206971365|ref|ZP_03232316.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH1134] gi|218899344|ref|YP_002447755.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9842] gi|228922935|ref|ZP_04086229.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954466|ref|ZP_04116491.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228967221|ref|ZP_04128257.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|229047876|ref|ZP_04193452.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH676] gi|229071687|ref|ZP_04204903.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus F65185] gi|229081439|ref|ZP_04213939.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-2] gi|229129460|ref|ZP_04258431.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-Cer4] gi|229146755|ref|ZP_04275120.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST24] gi|229180460|ref|ZP_04307802.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 172560W] gi|296504669|ref|YP_003666369.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis BMB171] gi|81837301|sp|Q818R6|EX7L_BACCR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694635|sp|B7IXH1|EX7L_BACC2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|29897819|gb|AAP11094.1| Exodeoxyribonuclease VII large subunit [Bacillus cereus ATCC 14579] gi|206734137|gb|EDZ51308.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH1134] gi|218544494|gb|ACK96888.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9842] gi|228602884|gb|EEK60363.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus 172560W] gi|228636583|gb|EEK93048.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST24] gi|228654065|gb|EEL09932.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-Cer4] gi|228701854|gb|EEL54340.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-2] gi|228711418|gb|EEL63377.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus F65185] gi|228723333|gb|EEL74702.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH676] gi|228792590|gb|EEM40156.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar sotto str. T04001] gi|228805123|gb|EEM51717.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836706|gb|EEM82053.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296325721|gb|ADH08649.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis BMB171] Length = 452 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|228916816|ref|ZP_04080381.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228843003|gb|EEM88086.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 452 Score = 372 bits (954), Expect = e-100, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I V+TSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVVTSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|229174857|ref|ZP_04302377.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus MM3] gi|228608525|gb|EEK65827.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus MM3] Length = 452 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRD++ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDVITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPAQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|242240148|ref|YP_002988329.1| exodeoxyribonuclease VII large subunit [Dickeya dadantii Ech703] gi|242132205|gb|ACS86507.1| exodeoxyribonuclease VII, large subunit [Dickeya dadantii Ech703] Length = 465 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 138/513 (26%), Positives = 228/513 (44%), Gaps = 57/513 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++VS L+ +K ++ES + + + GEIS + +SGH YF+LKD +++ +++ Sbjct: 7 SAIFTVSRLNQTVKQLLESEMGLIWLSGEISNF-SQPASGHWYFTLKDERAQVRCAMFRT 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++ F P+ G + L+ +T + YQ++ +S+ P+G G L E K++L EG Sbjct: 66 SNRRVVFRPQNGQQVLIRASVTLYEPRGDYQLLADSMHPAGDGLLQQQFEHLKQRLSAEG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF QHK P+P I VITS +GA + DILQ + R P L V+++P VQG E P +I Sbjct: 126 LFDQQHKQPLPKPAYRIGVITSASGAALHDILQVLQRRDPSLPVVVYPTAVQGVEAPLQI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N +E D++I+ RGGGS+EDLW FNDE + RAI S+IPI+SA+GHE Sbjct: 186 VRAIELANQRQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASNIPIVSAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T+AD+ ADLRAPTP+ AAE+ + L L RL+ + + + L Sbjct: 240 IDVTIADFVADLRAPTPSAAAELVSRDQTELLRRLQTQRQRLDMAMDYYLAQCQQRFSRL 299 Query: 311 LKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L L +R + RL + L+ ++ + + R R+ + + Sbjct: 300 HHRLQQQHPQLRLARQQTQLIRLSQRLDEAMQQQLRQTQRRQERAFQRLMQQQPQPRLHR 359 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 Q + + + ++ + Sbjct: 360 AHQQLQQLRYRLQSL--------------------------------------------- 374 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L ++ L++ + TL RGY+ + +TQ R + + Sbjct: 375 --LEKQLGQQKQRFGELCSHLEAVSPLATLARGYSVTTAADGQVLTQTRQASLGDTLKTR 432 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521 DG + + + K + K Sbjct: 433 LQDGWVESRITDVQALSSSIAPKRRSKTRKTTD 465 >gi|251788756|ref|YP_003003477.1| exodeoxyribonuclease VII large subunit [Dickeya zeae Ech1591] gi|247537377|gb|ACT05998.1| exodeoxyribonuclease VII, large subunit [Dickeya zeae Ech1591] Length = 461 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 139/519 (26%), Positives = 232/519 (44%), Gaps = 62/519 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ ++VS L+ +K ++E + V + GEIS + SSGH YF+LKD Sbjct: 1 MSSLPSSA-----IFTVSRLNQTVKQLLEGEMGQVWLSGEISNF-SQPSSGHWYFTLKDE 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + ++ F P+ G + L+ IT + YQ++ ES+ P+G G L Sbjct: 55 RAQVRCAMFRTSNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMHPAGDGLLQQQF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K++L EGLF Q+K +P + + VITS +GA + DIL + R P L V+I+P Sbjct: 115 EQLKQRLSAEGLFDQQYKQSLPKPARQVGVITSASGAALHDILHILQRRDPSLPVVIYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 175 AVQGVDAPGQIVRAIELANRREE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + RL + Sbjct: 229 RIPIVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRI 357 + ++ L L L +R + RL + L+ +++ + + R ++ R+ Sbjct: 289 LAHRQQQFVRLQHRLHQQHPQLRLARQQTQLIRLRQRLDEAIQLQLRLRMRRQERLVQRL 348 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + + +Q + + + I+ Sbjct: 349 QQHQPQSRLHRAQQQVQQLRYRIQ------------------------------------ 372 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 L ++ L++ + TL RGY+ + + Q Sbjct: 373 -----------HALEKQLNQHKQRFGEACSHLEAVSPLATLARGYSVTTAPDGKVMKQTA 421 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516 + + DG + V + K Q N Sbjct: 422 QITKGDILKTRLQDGWVESQVTEIKKESTKSRTKRQTKN 460 >gi|30264255|ref|NP_846632.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. Ames] gi|47529698|ref|YP_021047.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49187082|ref|YP_030334.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. Sterne] gi|65321565|ref|ZP_00394524.1| COG1570: Exonuclease VII, large subunit [Bacillus anthracis str. A2012] gi|165872985|ref|ZP_02217607.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0488] gi|167634492|ref|ZP_02392812.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0442] gi|167638588|ref|ZP_02396864.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0193] gi|170687494|ref|ZP_02878711.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0465] gi|170709012|ref|ZP_02899442.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0389] gi|177654828|ref|ZP_02936585.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0174] gi|190566009|ref|ZP_03018928.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis Tsiankovskii-I] gi|227816956|ref|YP_002816965.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. CDC 684] gi|229604498|ref|YP_002868474.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0248] gi|254683944|ref|ZP_05147804.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. CNEVA-9066] gi|254721779|ref|ZP_05183568.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. A1055] gi|254736292|ref|ZP_05193998.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. Western North America USA6153] gi|254741330|ref|ZP_05199017.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. Kruger B] gi|254754036|ref|ZP_05206071.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. Vollum] gi|254757907|ref|ZP_05209934.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis str. Australia 94] gi|81837607|sp|Q81M51|EX7L_BACAN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783687|sp|C3P7V9|EX7L_BACAA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783688|sp|C3LJV4|EX7L_BACAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|30258900|gb|AAP28118.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. Ames] gi|47504846|gb|AAT33522.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49181009|gb|AAT56385.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. Sterne] gi|164711268|gb|EDR16823.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0488] gi|167513436|gb|EDR88806.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0193] gi|167529944|gb|EDR92679.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0442] gi|170126039|gb|EDS94936.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0389] gi|170668689|gb|EDT19435.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0465] gi|172080489|gb|EDT65575.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0174] gi|190562928|gb|EDV16894.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis Tsiankovskii-I] gi|227004511|gb|ACP14254.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. CDC 684] gi|229268906|gb|ACQ50543.1| exodeoxyribonuclease VII, large subunit [Bacillus anthracis str. A0248] Length = 452 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQAKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|271501563|ref|YP_003334589.1| exodeoxyribonuclease VII large subunit [Dickeya dadantii Ech586] gi|270345118|gb|ACZ77883.1| exodeoxyribonuclease VII, large subunit [Dickeya dadantii Ech586] Length = 462 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 139/519 (26%), Positives = 231/519 (44%), Gaps = 62/519 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ ++VS L+ +K ++E + V + GEIS + SSGH YF+LKD Sbjct: 1 MSSLPSSA-----IFTVSRLNQTVKQLLEGEMGQVWLSGEISNF-SQPSSGHWYFTLKDE 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + ++ F P+ G + L+ IT + YQ++ ES+ P+G G L Sbjct: 55 RAQVRCAMFRTSNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMHPAGDGLLQQQF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K++L EGLF +K +P + + VITS +GA + DIL + R P L V+I+P Sbjct: 115 EQLKQRLSAEGLFDQHYKQLLPKPARQVGVITSASGAALHDILHILQRRDPSLPVVIYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 175 AVQGVDAPGQIVRAIELANLREE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L + RL + Sbjct: 229 RIPIVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIRAQRQRLEMAMDYY 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L L L +R + RL + L+ +++ + ++ R + R+ Sbjct: 289 LAQRQQQFVRLQHRLHQQHPQLRLARQQTQLIRLRQRLDDAIQLQLRQQTRRQERLAQRL 348 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + + +Q I + + + Sbjct: 349 QQHQPQSRLHRAQQQIQQLRYRMH------------------------------------ 372 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 L ++ L++ + TL RGY+ ++ + Q Sbjct: 373 -----------HALEKQLSQYKQQFGEACSHLEAVSPLATLARGYSVTTTSDGKVMKQTV 421 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516 + ++ DG + V +P K Q N Sbjct: 422 QVTKGDKLKTRLQDGWVESQVTEIKKESTKPRAKRQPKN 460 >gi|196034996|ref|ZP_03102403.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus W] gi|195992535|gb|EDX56496.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus W] Length = 452 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRAIEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|270264717|ref|ZP_06192982.1| exodeoxyribonuclease 7 large subunit [Serratia odorifera 4Rx13] gi|270041400|gb|EFA14499.1| exodeoxyribonuclease 7 large subunit [Serratia odorifera 4Rx13] Length = 461 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 138/503 (27%), Positives = 228/503 (45%), Gaps = 57/503 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ +++ + Sbjct: 9 IFTVSRLNQTVRQLLEMEMGQIWLSAEISNF-SQPASGHWYFTLKDDRAQVRCAMFRNSN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++L EGLF Sbjct: 68 RRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQRLSAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 Q K P+P K + VITS +GA + D+LQ + R P L ++I+P VQG E P +I Sbjct: 128 DQQFKQPLPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIVIYPTSVQGAEAPLQIVR 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHETD Sbjct: 188 AIETANRRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD+ ADLRAPTP+ AAE+ + L L + + R+ + + + + Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRINH 301 Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L +R + +L R LE ++ + R + R+ I + + Sbjct: 302 RLQQQHPHLRLARQQTLLFKLQRRLEDGMQNQLRLSSRRSDRAQQRLAQVQPQARIHRYQ 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + +++ ++Q Sbjct: 362 QRVQQQEYRLQQ-----------------------------------------------A 374 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L ++ + + L++ + TL RGY+ Q + + + Sbjct: 375 LERRLNAYRQRFGVACSQLEAVSPLATLARGYSVTQTPRGELLKTTKQAQVGELLKTRLQ 434 Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513 DG + V K+ K+ Sbjct: 435 DGWVESEVKTITVAKKPRKKRAA 457 >gi|228902698|ref|ZP_04066845.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL 4222] gi|228856885|gb|EEN01398.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL 4222] Length = 452 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKDEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|149375100|ref|ZP_01892872.1| exodeoxyribonuclease VII, large subunit [Marinobacter algicola DG893] gi|149360464|gb|EDM48916.1| exodeoxyribonuclease VII, large subunit [Marinobacter algicola DG893] Length = 451 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 150/490 (30%), Positives = 226/490 (46%), Gaps = 55/490 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL++ +H++E++ V V GE+SG+ SSGH YFSLKD +I +++G Sbjct: 13 LSVSELNHQARHLLEASFMQVWVEGELSGF-SRPSSGHWYFSLKDRKCQIRCAMFRGFNQ 71 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +++ +P+EG + + GK+T + +QII+E + P+G G L A E+ K+KL EGLF Sbjct: 72 RVKEIPKEGEQVRIRGKVTLYENRGDFQIIVEHVEPAGLGALQQAYEELKRKLQMEGLFD 131 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 K P+P P+ I V+TSPTGA I DIL ++ R P + V ++P VQG +I A Sbjct: 132 AARKKPLPSTPRHIGVVTSPTGAAIHDILTVLARRCPAIPVTLYPTAVQGQAATSDIVRA 191 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I + D++I+ RGGGS+EDLW FN+E + RAIA +P +SA+GHE D Sbjct: 192 IDRAAR------HGVADVLIIGRGGGSLEDLWCFNEEAVARAIAACPLPTVSAVGHEVDV 245 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+AD+ ADLRAPTP+ AAE P ++ L E RL R +K L L Sbjct: 246 TIADFVADLRAPTPSAAAEKISPDQQDWLRQLRERERRLAGAASRALKRMGTQLEHLSAR 305 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + L R+D L L + I R+ H+ R++ + NR+ + Sbjct: 306 LRDPRRELMEKAQRMDDLDLRLGKAMRQRIERENVRTEHLGQRLRMQSPAKRLNDNRRSV 365 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + + + ++ + + + Sbjct: 366 SQLSERLARV-------------------------ARQSVVQRQERL------------- 387 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + L + TL RGY +Q N N + Q L RI G Sbjct: 388 ---------EHLAQTLHVVSPLATLGRGYAIVQQENGNIVRQASELVPGDRITARVASGH 438 Query: 494 ANAIVINKAP 503 A V Sbjct: 439 LEANVTAVKS 448 >gi|229075888|ref|ZP_04208864.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-18] gi|229104808|ref|ZP_04235469.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-28] gi|228678681|gb|EEL32897.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-28] gi|228707203|gb|EEL59400.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock4-18] Length = 452 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA Sbjct: 180 APSIVQAIRTAN------EMGDIDVLIVGRGGGSIEELWAFNEEVVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNVIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I Q+ +++ + Sbjct: 354 KIIQTKVAIETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|291618403|ref|YP_003521145.1| XseA [Pantoea ananatis LMG 20103] gi|291153433|gb|ADD78017.1| XseA [Pantoea ananatis LMG 20103] Length = 464 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 139/506 (27%), Positives = 228/506 (45%), Gaps = 57/506 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + ++VS L+ ++ ++E+ + V + EIS + +SGH YF+LKD+ +++ + Sbjct: 11 PPNANIFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQVRCAM 69 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++ F P+ G + LV IT + YQ+IIES+ P+G G L E+ K +L Sbjct: 70 FRNGNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKARLA 129 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF +HK P+P K + V+TS TGA + D+L+ + R P L V+I+P VQG + P Sbjct: 130 QEGLFEPEHKKPLPQPAKQVGVVTSATGAALHDVLRVLHRRDPSLPVVIYPTAVQGVDAP 189 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA+ Sbjct: 190 AAIVRAIELANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAV 243 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L L + + RL + + + Sbjct: 244 GHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRVF 303 Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L L +R + RL + L +E + R + + R+ Sbjct: 304 SRLDHRLQQQHPQLRLARQQTALFRLQQRLGEAMEQRLRNATRQQDRLSQRLAQQQPQQR 363 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + ++Q + Sbjct: 364 LYLTQKSLQSWHYRLQQSM----------------------------------------- 382 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L+ + TL RG++ D + + R ++T + Sbjct: 383 ------EKLLNRDKNRFGQLAAQLEGVSPLATLARGFSVTTDNAGQVVKKTRQVSTGDLL 436 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 DG + V P K + K Sbjct: 437 RTRLDDGWVESQVTQLIPEKPKRKKS 462 >gi|228960448|ref|ZP_04122099.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799212|gb|EEM46178.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar pakistani str. T13001] Length = 452 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFQSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|119775494|ref|YP_928234.1| exodeoxyribonuclease VII large subunit [Shewanella amazonensis SB2B] gi|158513091|sp|A1S858|EX7L_SHEAM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|119767994|gb|ABM00565.1| Exodeoxyribonuclease VII large subunit [Shewanella amazonensis SB2B] Length = 447 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 148/494 (29%), Positives = 224/494 (45%), Gaps = 57/494 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ ++E L + + GEIS + SSGH Y +LKD+HS++ ++KG Sbjct: 8 VYTVSRLNGEVRQLLEGQLGRIWLTGEISNFSS-PSSGHWYLTLKDSHSQLRCAMFKGRN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P G + LV G I+ + YQ++IE++ P+G G L E K KL EGLF Sbjct: 67 TTVAFKPINGQQVLVRGSISVYEPRGDYQLLIEAMFPAGDGLLAAQFEALKMKLAAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K P+P + I VITSPTGA IRD+L + R P + V+I+P VQG K+I Sbjct: 127 AQDTKRPLPESIQRIGVITSPTGAAIRDVLHVLKRRDPSVEVVIYPTAVQGTGADKDIIR 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N E D+++L RGGGS+EDLW FN E + AI NS++ I+SA+GHE D Sbjct: 187 AIELANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHAIYNSTLTIVSAVGHEVD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 ++AD+ AD+RAPTP+ AE+ + H Q L ARL + + L SL Sbjct: 241 TSIADFVADVRAPTPSAGAELLSGDQSHKQQKLAGALARLTQGWRHYALKRHSGLISLQS 300 Query: 313 ALPNSDQT--LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L D L RLD L L +++ + + R++ + + Sbjct: 301 RLDRQDPKRQLQQQSQRLDELELRLTSSIQRRLSSHTLTTERLKARLERHSPAQRLMMEQ 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + + + Sbjct: 361 QRLTYLDERL-----------------------------------------------KGA 373 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +++ T + + L S + TL RGY+ +D +TQ ++ T I Sbjct: 374 MEDRLEDAQTHLGGLSHSLASVSPLATLSRGYSITRDAGGRVLTQASSMKTGDTIETQLE 433 Query: 491 DGQANAIVINKAPP 504 G A VI P Sbjct: 434 QGSLLARVIEIKPE 447 >gi|225866162|ref|YP_002751540.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB102] gi|254783689|sp|C1ERQ3|EX7L_BACC3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|225786828|gb|ACO27045.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus 03BB102] Length = 452 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTVADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|227328665|ref|ZP_03832689.1| exodeoxyribonuclease VII large subunit [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 464 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 141/521 (27%), Positives = 230/521 (44%), Gaps = 58/521 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ F ++VS L+ ++ ++E + + + GEIS SSGH YF+LKD Sbjct: 1 MSQFPSSA-----IFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + K+ F P+ G + L+ IT + YQ++ ES+ P+G G L Sbjct: 55 RAQVRCAMFRTSNRKVTFRPQNGQQVLIRASITLYEPRGDYQLLAESMQPAGDGLLQQQF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K++L EGLF Q K +P K + VITS +GA + DILQ + R P L VI++P Sbjct: 115 EQLKQRLAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 175 SVQGAEAPLQIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHETD T+AD+ DLRAPTP+ AAE+ + L + + RL + Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L L L +R Sbjct: 289 LAQRNRDFTRLHHRLQQQHPQLRLARQ--------------------------------- 315 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + K RQ + + Q Q+ + R L+++ + + R+ Sbjct: 316 ---QAQLVKLRQRLDDAMQQ--QLRQTSRRSERLQQRLMQQQPQTRIHRAQQRL------ 364 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++L +++ + ++ + I L+ + TL RGY + + + Sbjct: 365 -QQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNVAQI 423 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520 + DG + V P + K+ + + + Sbjct: 424 TPGETLKTRLQDGWVESQVTTLVPNPDSAKKQRKPSSRTPK 464 >gi|42783299|ref|NP_980546.1| exodeoxyribonuclease VII large subunit [Bacillus cereus ATCC 10987] gi|47569439|ref|ZP_00240120.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9241] gi|217961670|ref|YP_002340240.1| exodeoxyribonuclease VII large subunit [Bacillus cereus AH187] gi|222097626|ref|YP_002531683.1| exodeoxyribonuclease vii large subunit [Bacillus cereus Q1] gi|229140914|ref|ZP_04269458.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST26] gi|229157779|ref|ZP_04285854.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 4342] gi|229198307|ref|ZP_04325014.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1293] gi|81830971|sp|Q731B3|EX7L_BACC1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694637|sp|B7HNU3|EX7L_BACC7 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783690|sp|B9IXH3|EX7L_BACCQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|42739227|gb|AAS43154.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus ATCC 10987] gi|47553854|gb|EAL12224.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus G9241] gi|217066432|gb|ACJ80682.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus AH187] gi|221241684|gb|ACM14394.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus Q1] gi|228585186|gb|EEK43297.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus m1293] gi|228625736|gb|EEK82488.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus ATCC 4342] gi|228642490|gb|EEK98777.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST26] gi|324328094|gb|ADY23354.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis serovar finitimus YBT-020] Length = 452 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|229111655|ref|ZP_04241205.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-15] gi|228671790|gb|EEL27084.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-15] Length = 452 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFQSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|292489037|ref|YP_003531924.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora CFBP1430] gi|292900167|ref|YP_003539536.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora ATCC 49946] gi|291200015|emb|CBJ47140.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora ATCC 49946] gi|291554471|emb|CBA21989.1| exodeoxyribonuclease VII large subunit [Erwinia amylovora CFBP1430] Length = 457 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 144/513 (28%), Positives = 235/513 (45%), Gaps = 59/513 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 SQ + ++VS L+ ++ ++E + V + EIS + SSGH YF+LKD+ ++ Sbjct: 1 MSQAPGSN--IFTVSRLNSTVRKLLELEMGQVWLSAEISNF-SQPSSGHWYFTLKDDSAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ ++ F P+ G + LV IT + YQ+I ES++P+G G L E+ Sbjct: 58 VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMLPAGDGLLQQQFEQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K++L+ EGLF +HK P+P + + VITS +GA + D+L+ + R P L V+I+P VQ Sbjct: 118 KQRLMAEGLFEQRHKQPLPDPARQVGVITSASGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E P I AI N E D++I+ RGGGS+EDL FNDE + RAI S IP Sbjct: 178 GAEAPPGIVRAIELANARNE------CDVLIVGRGGGSLEDLCSFNDERVARAIFASRIP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+AADLRAPTP+ AAE+ + L + + R+ + + Sbjct: 232 IVSAVGHETDVTIADFAADLRAPTPSAAAELVSRNQTERLRQLQSQQQRMEMAMDYYLAR 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + T L L L +R + +L R L L+ + + R H+ R+ + Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMQLQRRLGDALQQHLRQATRRQQHLGQRLNAF 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I++ Q + + Q + Q ++ Sbjct: 352 RPELRIERASQQLQQWQYRLRQAMQ----------------------------------- 376 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ + L+ + TL RG++ N + + R L Sbjct: 377 ------------QQLGANKQRFGQLAARLEGVSPLATLARGFSVTSTANGQLVKKTRQLH 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 + DG + V P K+ + + Sbjct: 425 QGDTLKTRLDDGWVESEVTVITPLKKTRGRSVK 457 >gi|228941341|ref|ZP_04103893.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974273|ref|ZP_04134842.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980866|ref|ZP_04141170.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis Bt407] gi|228778802|gb|EEM27065.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis Bt407] gi|228785323|gb|EEM33333.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818267|gb|EEM64340.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 452 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMRE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMKELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIIQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|327394796|dbj|BAK12218.1| probable exodeoxyribonuclease VII large subunit XseA [Pantoea ananatis AJ13355] Length = 457 Score = 371 bits (952), Expect = e-100, Method: Composition-based stats. Identities = 139/506 (27%), Positives = 228/506 (45%), Gaps = 57/506 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + ++VS L+ ++ ++E+ + V + EIS + +SGH YF+LKD+ +++ + Sbjct: 4 PPNANIFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQVRCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++ F P+ G + LV IT + YQ+IIES+ P+G G L E+ K +L Sbjct: 63 FRNGNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKARLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF +HK P+P K + V+TS TGA + D+L+ + R P L V+I+P VQG + P Sbjct: 123 QEGLFEAEHKKPLPQPAKQVGVVTSATGAALHDVLRVLHRRDPSLPVVIYPTAVQGVDAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA+ Sbjct: 183 AAIVRAIELANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L L + + RL + + + Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRVF 296 Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L L +R + RL + L +E + R + + R+ Sbjct: 297 SRLDHRLQQQHPQLRLARQQTALFRLQQRLGEAMEQRLRNVTRQQDRLSQRLAQQQPQQR 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + ++Q + Sbjct: 357 LYLAQKSLQSWHYRLQQSM----------------------------------------- 375 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L+ + TL RG++ D + + R ++T + Sbjct: 376 ------EKLLNRDKNRFGQLAAQLEGVSPLATLARGFSVTTDNAGQVVKKTRQVSTGDLL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 DG + V P K + K Sbjct: 430 RTRLDDGWVESQVTQLIPEKPKRKKS 455 >gi|229031829|ref|ZP_04187817.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1271] gi|228729447|gb|EEL80436.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1271] Length = 452 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRD++ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDVITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPAQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRVAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|259907727|ref|YP_002648083.1| exodeoxyribonuclease VII large subunit [Erwinia pyrifoliae Ep1/96] gi|224963349|emb|CAX54834.1| Exodeoxyribonuclease VII large subunit [Erwinia pyrifoliae Ep1/96] gi|283477581|emb|CAY73497.1| exodeoxyribonuclease VII large subunit [Erwinia pyrifoliae DSM 12163] Length = 456 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 144/511 (28%), Positives = 232/511 (45%), Gaps = 59/511 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 SQ + ++VS L+ ++ ++E + V + EIS + SSGH YF+LKD+ ++ Sbjct: 1 MSQPPGSN--IFTVSRLNSTVRKLLEMEMGQVWLSAEISNF-SQPSSGHWYFTLKDDTAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ ++ F P+ G + LV IT + YQ+I ES+ P+G G L E+ Sbjct: 58 VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGDGLLQQQFEQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K++L+ EGLF HK P+P + + VITS +GA + D+L+ + R P L V+I+P VQ Sbjct: 118 KQRLMTEGLFEQAHKQPLPDPARQVGVITSSSGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E P I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP Sbjct: 178 GAEAPPGIVRAIELANARNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+ ADLRAPTP+ AAE + L + + R+ + + Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAEQVSRNQIERLRQLQSQQQRMEMAMDYYLAQ 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + T L L L +R + L R L+ L+ + R R + R+ + Sbjct: 292 QQRTFTRLQHRLQQQHPQLRLARQQTALMILQRRLDDALQQQLRRAARRQEILGQRLNAF 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I++ Q + + Q ++Q ++ Sbjct: 352 RPEIRIERASQQLQQWQYRLQQAMQ----------------------------------- 376 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ + L+ + TL RG++ + + I + R L Sbjct: 377 ------------QQLGTGKQHFGQLAARLEGVSPLATLARGFSVTSNADGQVIKKTRQLH 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V P K+ + Sbjct: 425 RGDTLKTRLDDGWVESEVTVITPLKKTRGRS 455 >gi|228910016|ref|ZP_04073836.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL 200] gi|228849533|gb|EEM94367.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis IBL 200] Length = 452 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 242/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E DI+I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDILIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L ++ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQRSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIIQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|229098652|ref|ZP_04229592.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-29] gi|229117677|ref|ZP_04247047.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-3] gi|228665769|gb|EEL21241.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock1-3] gi|228684731|gb|EEL38669.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-29] Length = 452 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA Sbjct: 180 APSIVQAIRTAN------EMGDIDVLIVGRGGGSIEELWAFNEEVVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNVIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I Q+ +++ + Sbjct: 354 KIIQTKVAIETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDISLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|262276500|ref|ZP_06054309.1| exodeoxyribonuclease VII large subunit [Grimontia hollisae CIP 101886] gi|262220308|gb|EEY71624.1| exodeoxyribonuclease VII large subunit [Grimontia hollisae CIP 101886] Length = 442 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 140/492 (28%), Positives = 233/492 (47%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + Y+VS L+ ++ ++E+ + V + GEIS +SGH YF+LKD +++ ++ Sbjct: 4 TNTNIYTVSRLNAEVRLLLENEMGIVWLVGEISNLTM-ATSGHWYFTLKDRQAQVKCAMF 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++ F P G + LV +++ + YQII+ES+ P G G L EK K +L Sbjct: 63 KGNNRRVTFRPANGNQVLVRARLSLYEPRGDYQIIVESMQPEGDGLLQQQFEKLKMQLAA 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K P+P P+ + V+TS TGA + DIL + R P L V+I+P +VQG + Sbjct: 123 EGLFAASLKKPLPEQPRRVGVVTSSTGAALHDILHVLKRRDPSLPVVIYPTQVQGKDAAI 182 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S+IPI+SA+G Sbjct: 183 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNEEIVARTIAASTIPIVSAVG 236 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ L RL + R + L Sbjct: 237 HEIDVTIADFVADVRAPTPSAAAELVSRDTSVRVQQLSQRTDRLAHAFSRHLSRSQEQLT 296 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + + +LD L R L ++ + + + + +++ + I Sbjct: 297 RLQHRLALQHPKARIQHQAQQLDELKRRLHQSMRYRLQTDAQRLDRALEKLERYSPANQI 356 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + +Q + +++ LR Sbjct: 357 PGQKALLGYMEQRLIDAMRRQLR------------------------------------- 379 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++++ L + + TL RGY+ ++ I L + +I+ Sbjct: 380 ----------QHQHALALKMETLDAVSPLATLARGYSITRNERGEVIRSVSMLKSGDQII 429 Query: 487 INFFDGQANAIV 498 +F DG+ + V Sbjct: 430 SSFGDGEIQSTV 441 >gi|206976322|ref|ZP_03237230.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus H3081.97] gi|206745518|gb|EDZ56917.1| exodeoxyribonuclease VII, large subunit [Bacillus cereus H3081.97] Length = 452 Score = 371 bits (951), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGAVIRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAVIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|301055673|ref|YP_003793884.1| exodeoxyribonuclease VII large subunit [Bacillus anthracis CI] gi|300377842|gb|ADK06746.1| exodeoxyribonuclease VII large subunit [Bacillus cereus biovar anthracis str. CI] Length = 452 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISIYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+AVP LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|329297574|ref|ZP_08254910.1| exodeoxyribonuclease VII large subunit [Plautia stali symbiont] Length = 455 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 143/511 (27%), Positives = 236/511 (46%), Gaps = 59/511 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S + + ++VS L+ ++ ++E+ + V + EIS + +SGH YF+LKD+ ++ Sbjct: 1 MSLPPTAN--IFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ + ++ F P+ G + LV IT + YQ+IIES+ P+G G L E+ Sbjct: 58 VRCAMFRNSNRRVSFRPQHGQQVLVRASITLYEPRGDYQLIIESMHPAGEGLLQQQFEQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K +L EGLF Q K P+P + +AVITS TGA + D+L+ + R P L V+I+P VQ Sbjct: 118 KARLAAEGLFDQQFKQPLPEPARQVAVITSATGAALHDVLRVLHRRDPSLPVVIYPTAVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + P I AI N E D++I+ RGGGS+EDLW FNDE + RAI S +P Sbjct: 178 GVDAPAAIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRLP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L L + + R+ + + Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELLRRLQSQQQRMEMAMDYYVAQ 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L L L +R + +L R L+ ++ + R + ++ R++S Sbjct: 292 QQRRFTRLQHRLQQQHPQLRLARQQTTLLQLQRRLQEAVDQRLRLANRQQDRLLQRLQSQ 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I + +Q + + ++Q Sbjct: 352 QPQERILRAQQQLQQWHYRLQQG------------------------------------- 374 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + ++ L+ + TL RG++ D+ + + R L Sbjct: 375 ----------MEKQLNHSRQRFGALAAQLEGVSPLATLARGFSVTTDSQGQVVKKTRQLH 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511 T + DG + V P K + K Sbjct: 425 TGDLLRTRLDDGWVESQVTALQPQKTRSRKA 455 >gi|228987371|ref|ZP_04147491.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228772343|gb|EEM20789.1| Exodeoxyribonuclease 7 large subunit [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 452 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 158/498 (31%), Positives = 240/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTAN------EMEGIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ + Sbjct: 354 KIMQTKVAVETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFAFVRVAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|229163126|ref|ZP_04291082.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus R309803] gi|228620532|gb|EEK77402.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus R309803] Length = 452 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 159/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N + E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMGE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I Q+ +++ + Sbjct: 354 KIMQTKVAIETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + + ++++ Sbjct: 374 -------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYGEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGILDCSVSGIE 444 >gi|212634310|ref|YP_002310835.1| exodeoxyribonuclease VII large subunit [Shewanella piezotolerans WP3] gi|212555794|gb|ACJ28248.1| Exonuclease VII, large subunit [Shewanella piezotolerans WP3] Length = 449 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 138/496 (27%), Positives = 221/496 (44%), Gaps = 57/496 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + + Y+VS L+ ++ ++E L + + EIS + SGH Y +LKDN S+I + Sbjct: 8 TSKNNVYTVSRLNGEVRQLLEGQLGRIWLNAEISNF-AAPGSGHWYLTLKDNFSQIRCAM 66 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++P+G G L E K KL Sbjct: 67 FKGRNQAVTFRPANGQQVLVKGNISVYEPRGDYQLLIESMLPAGDGLLAQQYEALKMKLA 126 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187 EG+F+ K P+P + I V+TSPTGA IRDIL ++ R + VII+P VQG + Sbjct: 127 AEGMFATDTKRPLPENIQRIGVVTSPTGAAIRDILHVLARRDSSIEVIIYPTAVQGTDAA 186 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I NAI N+ E D++++ RGGGS+EDLW FNDE + I NS IP++SA+ Sbjct: 187 VSICNAINLANSRAE------VDVLLVTRGGGSLEDLWSFNDEGLAHTIYNSGIPVVSAV 240 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY ADLRAPTP+ AE+ ++ L + +RL + N L Sbjct: 241 GHEVDTTISDYVADLRAPTPSAGAELLSKDADNKAQKLNAVLSRLQQSWQHYQLKQQNRL 300 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L + + L D + L+ L+ + + NR+ + H Sbjct: 301 QTCEHKLQKQDPQRRLQTYEQTFDEMQLRLQKALQTKLHSLTLKQQQLANRLDNQSPQHR 360 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ Q + + ++ + + Sbjct: 361 LELESQRLSYLAEKLKTSMT--------------------------------DKLAMSEQ 388 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R V+ + L + + TL RGY+ + + + + + Sbjct: 389 R---------------VAHRAQQLDTVSPLATLSRGYSITLNGEGKVVQGADDTSVGDTL 433 Query: 486 LINFFDGQANAIVINK 501 DG + VI+ Sbjct: 434 TTRLRDGNITSTVIDI 449 >gi|197285406|ref|YP_002151278.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis HI4320] gi|227355889|ref|ZP_03840281.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis ATCC 29906] gi|226697596|sp|B4EY61|EX7L_PROMH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|194682893|emb|CAR43242.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis HI4320] gi|227163877|gb|EEI48779.1| exodeoxyribonuclease VII large subunit [Proteus mirabilis ATCC 29906] Length = 462 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 149/512 (29%), Positives = 235/512 (45%), Gaps = 57/512 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 +++ ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD H++I A + Sbjct: 4 PINNNIFTVSRLNKTVRQLLEMEMGRIWISAEISNFT-QPASGHWYFTLKDTHAQIRAAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++G K+ F P+ G + LV IT + YQ+I+ES+ P+G G L E K+KL Sbjct: 63 FRGQNTKVTFRPQHGQQVLVRATITLYEPRGDYQLIVESMQPAGDGLLQQQFELLKQKLS 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF HK P+P K I VITS TGA + DIL + R P L +II+P VQG E P Sbjct: 123 AEGLFDALHKKPLPTPAKQIGVITSSTGAALHDILNILRRRDPSLPIIIYPTAVQGAEAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I +AI N KE D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+ Sbjct: 183 MQIVHAIELANRRKE------CDVLIVGRGGGSLEDLWAFNDERVARAIFASDIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ K L L + + RL + + K+ L Sbjct: 237 GHETDVTIADFIADLRAPTPSAAAELISRNKLELLRQLQSQQQRLEMAMDYYLAKKLRAL 296 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELE--HNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R + + + + ++ K + R+ Sbjct: 297 TQLHHRLQQQHPHLRLARQQNVLATTKQRLVTSFQRLLQTKQNQHTQLQKRLNYQEPSPQ 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ + + + + Sbjct: 357 IQALLRQQQQLIYRMRE------------------------------------------- 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +S ++ +I+ L+S + TL RGY+ + + + + + + + Sbjct: 374 ----SISQQLARQREQFAISCSRLESVSPLATLSRGYSISEVASGDVLKNTKQVKKGDTL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 DG + VIN + + ++ Sbjct: 430 KTRVEDGWITSEVINTQKIPAKRKPAPKSKSS 461 >gi|260771389|ref|ZP_05880314.1| exodeoxyribonuclease VII large subunit [Vibrio furnissii CIP 102972] gi|260613515|gb|EEX38709.1| exodeoxyribonuclease VII large subunit [Vibrio furnissii CIP 102972] Length = 440 Score = 370 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 139/492 (28%), Positives = 239/492 (48%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 2 TNPNIYTVSRLNAEVRLLLENEMGIVWLIGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG+ + F P+ G + LV +++ + YQIIIES+ P G G L ++ K +L Sbjct: 61 KGSNRFVRFKPQNGQQVLVKARLSLYEPRGDYQIIIESMQPEGDGRLQQEFDQLKMQLAA 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K+P+P P+ + VITS TGA + DILQ + R P L +II+P VQG++ Sbjct: 121 EGLFAQTLKHPLPEHPRCVGVITSKTGAALHDILQVLKRRDPSLPIIIYPTLVQGEDAAI 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N +E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+G Sbjct: 181 QIAQAIGRANAREE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H + + E +L++ + + + L Sbjct: 235 HEIDVTIADFVADVRAPTPSAAAELVSRDNSHKKQAFQGYEHKLSSAMRHYVSEQKGALK 294 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + +LD L LE ++ + + +H +R++ + Sbjct: 295 QLQYRLDKQHPMYRLQRQQQQLDELSMRLERAIQKQLNQTRQHVAKQQHRLQLQSPEKTL 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + +++ + Sbjct: 355 REQHYTLALRERSLI--------------------------------------------- 369 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ S + L + + TL RGY+ Q + + Q ++ T +++ Sbjct: 370 --DAMQRQLVSSRHRFTRLIDKLDTVSPLATLSRGYSITQTSQGEIVRQASDVKTGDQLV 427 Query: 487 INFFDGQANAIV 498 DG+ ++ V Sbjct: 428 TRLADGEIHSTV 439 >gi|90021105|ref|YP_526932.1| exodeoxyribonuclease VII large subunit [Saccharophagus degradans 2-40] gi|89950705|gb|ABD80720.1| Exodeoxyribonuclease VII large subunit [Saccharophagus degradans 2-40] Length = 454 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 140/498 (28%), Positives = 238/498 (47%), Gaps = 55/498 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 N + K + +SV EL+ +K ++E +L + V GEIS + +SGH YF+LKD Sbjct: 10 NQITAKRGGERKTFSVEELNRRVKDLLEVHLPLIWVEGEISNFSA-PASGHWYFTLKDER 68 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ ++KG +++F P+ G + L+ +++ + G +Q+I E + SG G L E Sbjct: 69 AQVRCAMFKGRNQQVKFRPKAGDKVLLRARVSLYEGRGDFQLIAEHMEESGFGLLQQRYE 128 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K +LL EGLF++ K PIP +P I +ITSPTGA +RD+L + RFP + V + P Sbjct: 129 ALKAQLLNEGLFNEADKQPIPTLPNHIGIITSPTGAAVRDVLSVLQRRFPSIPVTVIPAP 188 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD+ P ++ AI D+++L RGGGSIEDLW FN+E + R I Sbjct: 189 VQGDDAPAKLIQAIDI------AENSGLFDVLLLCRGGGSIEDLWAFNNEALARRIYECD 242 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IPI+SA+GHE D+T+AD+ ADLRAPTP+ AAE+ P K + L + +L + + + Sbjct: 243 IPIVSAVGHEVDFTIADFVADLRAPTPSAAAELLCPNKTDIDQLLQHFAKQLKQRLHQRL 302 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 +N L L + + L+ +LD+L L +++ + + + R+ Sbjct: 303 SQYAQAVNHLRTRLKHPGERLNARAQQLDQLEIRLTRAIQLRLQKDGTTLRNREQRLTQQ 362 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + ++++ + + + + Q + + + Sbjct: 363 HPQKLLAQHQKDLAKLRLQLNQAISRL--------------------------------L 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K R++ + +L + TLKRGY+ + I + Sbjct: 391 DKKTDRLQRAV---------------ALLDIASPLATLKRGYSITTKADGTVIRTPADTP 435 Query: 481 TKTRILINFFDGQANAIV 498 I I +G+ +A + Sbjct: 436 KGETIHIKLAEGELSAKI 453 >gi|331673961|ref|ZP_08374724.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA280] gi|331069234|gb|EGI40626.1| exodeoxyribonuclease VII, large subunit [Escherichia coli TA280] Length = 456 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG ++V + A ++ K Sbjct: 429 LTTRLNDGVVVSVVSDVAKTRKPRKK 454 >gi|157371832|ref|YP_001479821.1| exodeoxyribonuclease VII large subunit [Serratia proteamaculans 568] gi|166919634|sp|A8GHV3|EX7L_SERP5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157323596|gb|ABV42693.1| exodeoxyribonuclease VII, large subunit [Serratia proteamaculans 568] Length = 458 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 140/504 (27%), Positives = 227/504 (45%), Gaps = 57/504 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ +++ T Sbjct: 9 IFTVSRLNQTVRQLLEMEMGQIWLSAEISNF-SQPSSGHWYFTLKDDRAQVRCAMFRNTN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P+ G + LV IT + YQ+I ES+ P+G G L ++ K++L EGLF Sbjct: 68 RRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQRLSAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 Q K P+P K + VITS +GA + D+LQ + R P L +II+P VQG E P +I Sbjct: 128 DQQFKQPLPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIIIYPTSVQGAEAPLQIVR 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHETD Sbjct: 188 AIETANRRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD+ ADLRAPTP+ AAE+ + L L + + R+ + + + + Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRINH 301 Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L +R + +L R LE ++ + R R+ I + + Sbjct: 302 RLQQQHPHLRLARQQTLLFKLQRRLEDGMQNQLRLSSRRSERAQQRLAQMQPQARIHRYQ 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + +++ ++Q Sbjct: 362 QRVQQQEYRLQQ-----------------------------------------------A 374 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L ++ + + L++ + TL RGY+ Q + + + Sbjct: 375 LERQLNAWRQRFGVACSQLEAVSPLATLARGYSVTQTPRGELLKTTKQAQVGELLKTRLQ 434 Query: 491 DGQANAIVINKAPPKEQPTKKCQL 514 DG + V K+ K+ Sbjct: 435 DGWVESEVKTITLAKKPRKKRAAE 458 >gi|226326335|ref|ZP_03801853.1| hypothetical protein PROPEN_00183 [Proteus penneri ATCC 35198] gi|225205286|gb|EEG87640.1| hypothetical protein PROPEN_00183 [Proteus penneri ATCC 35198] Length = 460 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 152/507 (29%), Positives = 243/507 (47%), Gaps = 53/507 (10%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 +++ ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD H++I A + Sbjct: 4 PINNNIFTVSRLNKTVRQLLEMEMGRIWISAEISNFT-QPSSGHWYFTLKDTHAQIRAAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++G K+ F P+ G + LV IT + YQ+I+ES+ P+G G L E K+KL Sbjct: 63 FRGQNAKVTFRPQHGQQVLVRATITLYEPRGDYQLIVESMQPAGDGLLQQQFELLKQKLS 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF +K P+P K I VITS TGA + DIL + R P L V+I+P VQG E P Sbjct: 123 AEGLFDAIYKKPLPSPAKQIGVITSSTGAALHDILNILRRRDPSLPVLIYPTAVQGAEAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I +AI N KE D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+ Sbjct: 183 MQIVHAIELANRRKE------CDVLIVGRGGGSLEDLWAFNDERVARAIFASEIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ K L L + + RL + + K+ + Sbjct: 237 GHETDVTIADFIADLRAPTPSAAAELISRNKLELLRQLQSQQQRLEMAMDYYLAKKLRAI 296 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L L +R + + Sbjct: 297 TQLYHRLQQQHPHLRLARQQN-----------------------------VLASTQQRLV 327 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + Q +L+ +QH + +++ L Y ++ ++I L + LI R+ Sbjct: 328 SSFQRLLQAKQHQQTQLQKRLNY----------------QEPSSQIQTLLRQQQLLIYRM 371 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 ++ ++ +I+ L+S + TL RGY+ + + + + + + Sbjct: 372 RESIAQQLSRQREQFAISCSRLESVSPLATLSRGYSISETMSGEVLKNTKQVKVGDPLKT 431 Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQL 514 DG + V+ + + + Sbjct: 432 RVEDGWITSEVVKTQKIRAKRKTTAKN 458 >gi|296114490|ref|ZP_06833143.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter hansenii ATCC 23769] gi|295978846|gb|EFG85571.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter hansenii ATCC 23769] Length = 486 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 160/496 (32%), Positives = 263/496 (53%), Gaps = 29/496 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + EYSVSE+S ++ +E + VRGEI+ ++ +SSGH YFSLKD Sbjct: 7 PSGAPGATNIAEYSVSEISGAIRSTLEGTFGRIRVRGEITEFK-RYSSGHLYFSLKDEKG 65 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ +++W+G+++++ PE G+E + GKI+++ S YQ++I+ L +G G LL +EK Sbjct: 66 KLSSVVWRGSVSRLGLKPENGVEVIATGKISSYGERSSYQMVIDRLEYAGEGALLARIEK 125 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182 + +L +EG+F + K IPF+P++I V+TS GAV+ DI ++ RFP ++++PV VQ Sbjct: 126 LRLRLAQEGVFDAERKQRIPFLPRVIGVVTSAQGAVLHDIRTTVARRFPRDLLVWPVPVQ 185 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ + IA A+ + + RPD++I+ARGGGS+EDL FNDE ++RA+A +IP Sbjct: 186 GEGAAERIAEAVAGFDRIDGRTGIARPDVLIVARGGGSLEDLMAFNDESVLRAVAACTIP 245 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +ISA+GHETD TL D+ +D RAPTPT AAEMAVPV+ L++ L + ARL+N + R+++ Sbjct: 246 VISAVGHETDTTLIDFVSDRRAPTPTAAAEMAVPVRTELEADLAHRMARLSNGLGRVLQL 305 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L LP+ L +R RLD L+ L ++ R+ +R+ Sbjct: 306 GRARLGRAAAGLPDLPSLLETARIRLDDRGYRLDMALPALLERRRARLQAACDRLP--TP 363 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 I R + + + +++ + LR Sbjct: 364 GTIIALKRSGLTLASAALARGGP-------QYLRDRRGRVTALRPSAP------------ 404 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 L ++ V L+S + + L+RGY +QD + +T + Sbjct: 405 -------ALLALLRERRARVQGEGGRLESLSPRAVLERGYVLVQDRAGHPLTLAAEVKAG 457 Query: 483 TRILINFFDGQANAIV 498 ++++ F DG A V Sbjct: 458 AQVIMTFADGDVAARV 473 >gi|145298846|ref|YP_001141687.1| exodeoxyribonuclease VII, large subunit [Aeromonas salmonicida subsp. salmonicida A449] gi|142851618|gb|ABO89939.1| exodeoxyribonuclease VII, large subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 456 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 144/504 (28%), Positives = 238/504 (47%), Gaps = 57/504 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P S N + ++V+ L+ ++ I+E +L V + GE+S + SSGH YFSLKD Sbjct: 5 TPSSAANGREQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNL-AMPSSGHWYFSLKDLG 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ ++KG ++ F P++G++ LV +++ + YQ+IIES+ P+G G L E Sbjct: 64 AQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRFE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K++L EGLF + K P+P P+ + ++TS TGA + D+L + R P L V I+P + Sbjct: 124 ELKRRLGAEGLFDEGRKRPLPREPRAVGLVTSATGAALHDMLTVLKRRAPDLPVFIYPTQ 183 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I AI N E D++I+ RGGGS+EDLW FN+E++ RAIANS+ Sbjct: 184 VQGSAAIGQIVAAIALANRRAE------VDVLIVGRGGGSLEDLWCFNEEVVARAIANSA 237 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHE D T++D+AADLRAPTP+ AAE+ P + L +L RL + R Sbjct: 238 IPVISAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLWQRLVQAMNRHQ 297 Query: 301 KYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L K L + + L RLD L L+ L + + R ++ R++ Sbjct: 298 TAARHGFVLLQKRLDHQDPKRRLEQQSQRLDELSARLQQLLNQRLHQGERRLANLELRLQ 357 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + + R+ Q+ + ++ + Sbjct: 358 AKSPERLLAIGRRRHQLAQERLYALITKRQDQASH------------------------- 392 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 +++ T L + TL RGY+ + + + I + Sbjct: 393 ----------------------RLAMLTARLDGVSPLATLGRGYSITRTQSGDVINRAAQ 430 Query: 479 LATKTRILINFFDGQANAIVINKA 502 + ++ +G V Sbjct: 431 VNAGQTLVTTLAEGHLQVRVEEVH 454 >gi|292493718|ref|YP_003529157.1| exodeoxyribonuclease VII large subunit [Nitrosococcus halophilus Nc4] gi|291582313|gb|ADE16770.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus halophilus Nc4] Length = 452 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 139/502 (27%), Positives = 238/502 (47%), Gaps = 55/502 (10%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M S Y++S L ++++E N + V GEIS SSGH YF+LKD Sbjct: 1 MANVSSNPKSAQDIYTISRLVREARYVLERNFPLLWVAGEISNL-SQPSSGHIYFTLKDK 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + F E+G++ L ++ + ++Q+I+E L +G G L A Sbjct: 60 TAQVRCAMFRNRNRLLGFSLEDGMQVLARAQVGLYETRGEFQLIVEYLEEAGDGALRRAF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K+KL EGLF+ +HK P+P +P+ + VITSP+GA I+DIL + RFP + V+I+P Sbjct: 120 EELKQKLSAEGLFAPEHKRPLPTLPRQVGVITSPSGAAIQDILSVLKRRFPAIPVLIYPT 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ ++IA AI + + D++ILARGGGS+EDLW FN+E + R I N Sbjct: 180 PVQGEGASQKIAAAIAKAEQRCD------CDLLILARGGGSLEDLWAFNNETLARTIYNC 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 ++PII +GHE D+T+AD+AAD RAPTP+ AAE+AVP +NLE RL + + Sbjct: 234 TLPIICGVGHEIDFTIADFAADQRAPTPSAAAEIAVPDSREWCQHFLNLEQRLGFLFQQR 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 +++ ++L L + L + L R+D L + L + ++ ++ ++ Sbjct: 294 LQHLRHSLEGLTQRLRHPHTRLQEWAQRVDELEQRLHRAYTTLERERFHRLERLLTHLQR 353 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ +++ + ++ +QH Sbjct: 354 LSPAQRLEVYHSRLVDLDRRLQASQQQH-------------------------------- 381 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + R LQ+ + + TL+RGY + + + + Sbjct: 382 ---------------LEQQRMRFEMAQRALQAVSPQATLERGYAIVTGPQGVVLRKASQV 426 Query: 480 ATKTRILINFFDGQANAIVINK 501 RI G+ + Sbjct: 427 EPGARIEARLARGRIRGEITEI 448 >gi|307132052|ref|YP_003884068.1| exonuclease VII, large subunit [Dickeya dadantii 3937] gi|306529581|gb|ADM99511.1| exonuclease VII, large subunit [Dickeya dadantii 3937] Length = 467 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 137/514 (26%), Positives = 231/514 (44%), Gaps = 57/514 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + ++VS L+ +K ++E + V + GEIS + SSGH YF+LKD +++ Sbjct: 7 SSSLPSSAIFTVSRLNQTVKQLLEGEMGQVWLSGEISNF-SQPSSGHWYFTLKDERAQVR 65 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ ++ F P+ G + L+ IT + YQ++ ES+ P+G G L E+ K+ Sbjct: 66 CAMFRTGNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMHPAGDGLLQQQFEQLKQ 125 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF Q+K +P + + VITS +GA + DIL + R P L V+I+P VQG Sbjct: 126 RLSAEGLFDQQYKQLLPKPARQVGVITSASGAALHDILHILQRRDPSLPVVIYPTAVQGV 185 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+ Sbjct: 186 DAPAQIVRAIELANLRQE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIV 239 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + RL + + + Sbjct: 240 SAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRQ 299 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L L +R + RL + L+ +++ + ++ R ++ R++ Sbjct: 300 QQFVRLQHRLHQQHPQLRLARQQTQLIRLRQRLDEAIQLQLRQQTRRQERVVQRLRQHQP 359 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + + +Q + + + ++ Sbjct: 360 QPRLHRAQQQVQQLRYRMQ----------------------------------------- 378 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 L ++ L++ + TL RGY+ + + + A Sbjct: 379 ------SALEKQLNQHKQRFGEACSHLEAVSPLATLARGYSVTTAPDGKVMKRTAQAAKG 432 Query: 483 TRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516 + DG + + +P K Q N Sbjct: 433 DILKTRLQDGWVESQITEIQKESTKPRTKRQTKN 466 >gi|253689374|ref|YP_003018564.1| exodeoxyribonuclease VII, large subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259646296|sp|C6DBG5|EX7L_PECCP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|251755952|gb|ACT14028.1| exodeoxyribonuclease VII, large subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 462 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 140/519 (26%), Positives = 229/519 (44%), Gaps = 58/519 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ F ++VS L+ ++ ++E + + + GEIS SSGH YF+LKD Sbjct: 1 MSQFPSSA-----IFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + ++ F P+ G + L+ IT + YQ++ ES+ P+G G L Sbjct: 55 RAQVRCAMFRTSNRRVTFRPQNGQQVLIRATITLYEPRGDYQLLAESMQPAGDGLLQQQF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K+KL EGLF Q K +P K + VITS +GA + DILQ + R P L VI++P Sbjct: 115 EQLKQKLAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 175 SVQGADAPLQIVRAIELANQREE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHETD T+AD+ DLRAPTP+ AAE+ + L + + RL + Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L L L +R Sbjct: 289 LAQRNREFTRLHHRLQQQHPQLRLARQ--------------------------------- 315 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + K RQ + + Q Q+ + R L+++ + + R Sbjct: 316 ---QAQLVKLRQRLDDAMQQ--QLRQTLRRSERLQQRLMQQQPQTRIHRAQQR------- 363 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 +++L +++ + ++ + I L+ + TL RGY + + + Sbjct: 364 LQQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNVTQI 423 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518 + DG + V P K+ + + Sbjct: 424 TPGETLKTRLQDGWVESQVTTLVPNPSSVKKRRKPSSQS 462 >gi|119476444|ref|ZP_01616795.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2143] gi|119450308|gb|EAW31543.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2143] Length = 469 Score = 369 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 138/503 (27%), Positives = 234/503 (46%), Gaps = 50/503 (9%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + + ++S+L+ K ++E N V + GEIS SSGH YFSLKD+ Sbjct: 12 MQTNTDIQTPKRDTLTISQLNRQAKRLLEGNFPSVWIVGEISNL-SRPSSGHWYFSLKDS 70 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++++ +++ + ++ F + G + + K++ + YQ+I+E + +G G L Sbjct: 71 NAQVRCAMFRTSNARLRFQADSGQQVMARAKLSLYEARGDYQLIVEHMELAGDGLLARQF 130 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 ++ K +L +EGLF QHK +P +P+ IA++TSPTGA I DIL + RFP + V IFP Sbjct: 131 DELKHRLFQEGLFDQQHKQILPTLPRHIAIVTSPTGAAIHDILTVLGRRFPSIPVTIFPT 190 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG IA AI +N L + P D+I+++RGGGS+EDLW FN+E++ RAI+ S Sbjct: 191 PVQGQAAAAGIAKAISLVNQLAASGSLP-VDVILVSRGGGSLEDLWAFNEEVVARAISQS 249 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P++SA+GHE D T+AD+ AD RAPTP+ AE+ P ++ + ++ E L +++ Sbjct: 250 DLPVVSAVGHEVDVTIADFVADHRAPTPSAGAELLSPDRQEILANFTGYEQALIRRMLQQ 309 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ L+ L + L RLD L L+++ ++ + I +R++ Sbjct: 310 LESSRQRLHWQQTRLRHPGSRLQEHSQRLDELELRLKNSWRNRCQQQKLGIDLIQSRLQQ 369 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 H ++ + +EQ V + + + Sbjct: 370 QTPAHLTRQLTVRYQNLYRRLEQQVAKQMTHR---------------------------- 401 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + T +L + + TL RGY + D IT Sbjct: 402 -------------------RQKLDNTMHLLDAVSPLATLDRGYAIVADAKGQVITNAATA 442 Query: 480 ATKTRILINFFDGQANAIVINKA 502 I G + V++ Sbjct: 443 TVGQSIHTKLAKGAIKSTVVSIE 465 >gi|238753869|ref|ZP_04615229.1| Exodeoxyribonuclease 7 large subunit [Yersinia ruckeri ATCC 29473] gi|238707857|gb|EEQ00215.1| Exodeoxyribonuclease 7 large subunit [Yersinia ruckeri ATCC 29473] Length = 459 Score = 368 bits (945), Expect = 1e-99, Method: Composition-based stats. Identities = 141/510 (27%), Positives = 228/510 (44%), Gaps = 57/510 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ + Sbjct: 4 TSATSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ + + F P+ G LV IT + YQ+I ES+ P+G G L E+ K +L Sbjct: 63 FRNSNRRTTFKPQNGQMVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKARLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF HK P+P K + VITS +GA + D+LQ + R P L V+I+P VQG E P Sbjct: 123 AEGLFDALHKQPLPAPAKRVGVITSASGAALHDVLQVLQRRDPSLPVVIYPTSVQGAEAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+ Sbjct: 183 MQIVRAIEMANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASQIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAEM + L + + R+ + + + Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAEMISRNQVELVRQIQAQQQRMEMAMDYYLAQRHQQF 296 Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R + +L R LE + I R + R+ + + Sbjct: 297 TRLHHRLQQQHPHLRLARQQTLLLKLQRRLEDAAQNQIRLLARRGERLQQRLNNRQPLGK 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I Q + +++ ++Q Sbjct: 357 IHHYHQRVQQQEYRLKQ------------------------------------------- 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L ++ I L++ + TL RGY+ Q + + + + + + Sbjct: 374 ----ALERQLNGYRQRFGIACSQLETVSPLATLARGYSVTQTPSGSLLKTTQQVHIGDTL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLH 515 DG + + P K+ + + Sbjct: 430 KTRLQDGWVESEITRLTPVKKTLKPRSRAK 459 >gi|293410920|ref|ZP_06654496.1| exodeoxyribonuclease VII [Escherichia coli B354] gi|291471388|gb|EFF13872.1| exodeoxyribonuclease VII [Escherichia coli B354] Length = 456 Score = 368 bits (945), Expect = 1e-99, Method: Composition-based stats. Identities = 143/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASLIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSARQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 RIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ + + Q + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTSAADGAVLKQVKQVKAGDT 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG ++V + A ++ K Sbjct: 429 LTTRLNDGVVVSVVSDVAKTRKPRKK 454 >gi|188533180|ref|YP_001906977.1| exodeoxyribonuclease VII large subunit [Erwinia tasmaniensis Et1/99] gi|226695873|sp|B2VE96|EX7L_ERWT9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|188028222|emb|CAO96080.1| Exodeoxyribonuclease VII large subunit [Erwinia tasmaniensis Et1/99] Length = 456 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 142/511 (27%), Positives = 231/511 (45%), Gaps = 59/511 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 SQ + ++VS L+ ++ ++E + V + EIS + SSGH YF+LKD+ ++ Sbjct: 1 MSQPPGTN--IFTVSRLNSTVRKLLEMEMGQVWLSAEISNF-SQPSSGHWYFTLKDDTAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ ++ F P+ G + LV IT + YQ+I ES+ P+G G L ++ Sbjct: 58 VRCAMFRNGNRRVTFRPQNGQQVLVRATITLYEPRGDYQLIAESMQPAGDGLLQQQFDQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K++L+ EGLF HK P+P + + VITS +GA + D+L+ + R P L V+I+P VQ Sbjct: 118 KQRLMAEGLFEQAHKQPLPDPARQVGVITSSSGAALHDVLRVLQRRDPSLPVVIYPTPVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E P I AI N KE D++I+ RGGGS+EDLW FNDE + RAI S IP Sbjct: 178 GAEAPTGIVRAIELANARKE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L + R+ + + Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRDQIERLRQLQQQQQRMEMAMDYYLAR 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + +T L L L +R + ++ R L+ L+ + + R + R+ + Sbjct: 292 QQSTFTRLQHRLQQQHPQLRLARQQTALMKVQRRLDDALQQHLRQATRRQEQLGQRLNAF 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I++ Q + + Q + Q + + R+ H Sbjct: 352 RPEMRIERASQQLQQWQYRLRQAM-------------------------QQRLGTGKQH- 385 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L+ + TL RG++ + + L Sbjct: 386 ---------------------FGQLAARLEGVSPLATLARGFSVTSTAEGQVVKKTGQLH 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + V P K+ + Sbjct: 425 QGDTLKTRLDDGWIESEVTAITPLKKTRRRS 455 >gi|319405222|emb|CBI78827.1| exodeoxyribonuclease VII large subunit [Bartonella sp. AR 15-3] Length = 475 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 210/530 (39%), Positives = 305/530 (57%), Gaps = 56/530 (10%) Query: 1 MNPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ F +K+ + + E+SVSE++ L+ IVE +V VRGEISGYRG+H+SGHAYF+LKD Sbjct: 1 MDLFLEKSVATNVAEFSVSEIAGALRRIVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEG+E + +GK+TT+ GSSKYQIII++L P+G G L+T Sbjct: 61 DKARLEAVIWRGVIEKLQFPPEEGMEVVAVGKLTTYQGSSKYQIIIDTLEPTGVGALMTL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKK +EGLF D K +P++P+II V+TSPTGAVIRDI+ RIS RFPL ++++PV Sbjct: 121 LENRKKKFADEGLFDDAKKKKLPYMPRIIGVVTSPTGAVIRDIIHRISDRFPLHILVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A AI N L G +PD+II+ARGGGS+EDLW FNDE +VRA++ S Sbjct: 181 RVQGETSGQEVAAAIAGFNALPLGNVLSKPDLIIVARGGGSLEDLWGFNDEAVVRAVSAS 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK L++ L +L R R Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAERAVPVKLDLETQLASLNLRFFVGSARY 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+++++ LP DQ + R D + L+ L + +K F ++ R+ Sbjct: 301 FSFYKQKLSAVVRGLPTVDQLFALPRRNFDEISSRLQRALCVNYDKKRFCFYTLVIRLSP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L N +K +Q+ E + Sbjct: 361 RLL--NTKKAQQNTKEYTVRLHHAFL---------------------------------- 384 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + + R+L+S +Y++ L+RG+ NN I + Sbjct: 385 -------------RNVEKQRVQIEMAFRLLKSTSYQSILERGFVLALGQENNPIKRLVQF 431 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG+ N N +K+ + + QG LF Sbjct: 432 PRTGQISLRFFDGEVNVSTCNSVSKNSPNSKQLKRQKD------DQGTLF 475 >gi|119713108|gb|ABL97177.1| exodeoxyribonuclease VII large subunit [uncultured marine bacterium EB0_49D07] Length = 461 Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 137/495 (27%), Positives = 221/495 (44%), Gaps = 49/495 (9%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + + SV +L+ K ++E+ + V GEIS SSGH YF+LKD I + Sbjct: 15 NHEEQVISVGQLNQQAKRLLENQFRGIAVLGEISNL-ARPSSGHIYFTLKDEDGAIRCAM 73 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ +++ F P+ G + ++ G+++ + YQ+I+ S+ P+GSG L+ ++ KKKL Sbjct: 74 FRNQNSRLNFEPQNGDQCILKGQVSLYAPRGDYQLIVSSMQPAGSGNLMQQFDELKKKLD 133 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 EGLFS K +P P+ I VITS + A +DIL I R P+ +V + P VQGD P Sbjct: 134 AEGLFSQDIKQNLPTQPRHIGVITSESTAAFQDILTTIQRRAPISQVTLIPATVQGDTAP 193 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + + NA+ D+I++ RGGGSIEDLW FN+E + R I + IPIIS + Sbjct: 194 RTLINALQNALDFNNVNPENSFDVILMCRGGGSIEDLWAFNNESLAREIFDYPIPIISGV 253 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D+T+AD+ ADLRAPTPT AAE+ L+ ++ + + L + L+K K + Sbjct: 254 GHEIDFTIADFVADLRAPTPTAAAELVTEYYFQLEDAIEDAKDALMHSFKNLVKEKYQRI 313 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + ++L + L LD L L ++ + + N + + I+ Sbjct: 314 LLISQSLKSPIILLKEQSQSLDNLEIRLSQIIQNSLNSTKQDLKIASNLLYQSNAMRVIE 373 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 K + I K Q I+ Sbjct: 374 KYQGMISSKMQSIQ---------------------------------------------- 387 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + ++ L + + L RGY + D++ +T N+ I Sbjct: 388 -HQIKSAMIKKGYALKNLETNLVAVSPLAVLDRGYAIVMDSSGKALTSSANIKVGDTIQT 446 Query: 488 NFFDGQANAIVINKA 502 G + V K Sbjct: 447 RLATGNLTSDVTKKK 461 >gi|163941938|ref|YP_001646822.1| exodeoxyribonuclease VII large subunit [Bacillus weihenstephanensis KBAB4] gi|229013398|ref|ZP_04170535.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides DSM 2048] gi|229061870|ref|ZP_04199200.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH603] gi|229135002|ref|ZP_04263808.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST196] gi|229168924|ref|ZP_04296641.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH621] gi|226694638|sp|A9VGD4|EX7L_BACWK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|163864135|gb|ABY45194.1| exodeoxyribonuclease VII, large subunit [Bacillus weihenstephanensis KBAB4] gi|228614516|gb|EEK71624.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH621] gi|228648504|gb|EEL04533.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus BDRD-ST196] gi|228717431|gb|EEL69099.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH603] gi|228747810|gb|EEL97676.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides DSM 2048] Length = 452 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 157/498 (31%), Positives = 238/498 (47%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N D++I+ RGGGSIE+LW FN+E++ R I S IPIISA Sbjct: 180 APSIVQAIRTAN------EMGDIDVLIVGRGGGSIEELWAFNEEVVAREIFTSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+AVP LQ ++ RL + + K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNTIELQEKVLQRTLRLQRAMRERVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I Q+ +++ + Sbjct: 354 KIIQTKTAIETLQKQLQREM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + L+ + + RGY + D + ++++ Sbjct: 374 -------QTLLQTKEFVFVRAAQKLEVLSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDA 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V + Sbjct: 427 VSVQLQDGILDCSVSSIE 444 >gi|158521676|ref|YP_001529546.1| exodeoxyribonuclease VII, large subunit [Desulfococcus oleovorans Hxd3] gi|158510502|gb|ABW67469.1| exodeoxyribonuclease VII, large subunit [Desulfococcus oleovorans Hxd3] Length = 448 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 146/499 (29%), Positives = 245/499 (49%), Gaps = 58/499 (11%) Query: 6 QKNSLDHPE---YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 + PE Y+VS L+ +K ++E + V GEIS ++ SGH YF+LKD+ + Sbjct: 2 AQTHTSLPESGIYTVSRLTGEIKVLLEKQFPIIWVEGEISNFK-RPGSGHFYFTLKDSTA 60 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ A+++ ++F+PE+G++ +G+I+ + YQ+I E ++P G G L+ A E+ Sbjct: 61 QVQAVMFVNQNRGLKFMPEDGMKITGLGRISVYAPRGNYQVIFEHIMPQGMGELVAAFEQ 120 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 KKKL +EGLF K P+PF+P + +I+SPTGAV+ D++ ++ RFP + + I P V Sbjct: 121 LKKKLADEGLFDPGRKKPVPFLPAKVCLISSPTGAVVHDMIHVMTRRFPGIEIEILPASV 180 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD+ EIA A+ N + D++++ARGGGS+EDL+ FN E + RA+A S+I Sbjct: 181 QGDKAAVEIAAALALANRRADA------DVLVVARGGGSLEDLFAFNTETVARAVAASAI 234 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SA+GHETD+T+ D+ ADLRAPTP+ AAE+ VPVK+ L + NL R+ +I+ Sbjct: 235 PVVSAVGHETDFTICDFVADLRAPTPSAAAELIVPVKKELLAHCRNLRVRMVKGFDNIIR 294 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 ++ L + K L + + L + RLD L L L+ I ++ ++ S Sbjct: 295 HRRRALRDMAKRLIDPRRALGDALLRLDELAMRLVRALDREIAKRAERLAWQQKQLFSRM 354 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + + + ++ Sbjct: 355 PERLTTEGLALTDRLVERLSSAMQ------------------------------------ 378 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLA 480 + ++ V T+ L + + + L+RGY+ Q ++ I + Sbjct: 379 ----------TTYLRENRHRVDGLTQRLFALSPRAVLERGYSITQKVSDGQVIKKTGQAD 428 Query: 481 TKTRILINFFDGQANAIVI 499 + I DG V Sbjct: 429 PGDALTIIVSDGSVRCTVD 447 >gi|152998145|ref|YP_001342980.1| exodeoxyribonuclease VII large subunit [Marinomonas sp. MWYL1] gi|150839069|gb|ABR73045.1| exodeoxyribonuclease VII, large subunit [Marinomonas sp. MWYL1] Length = 446 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 142/500 (28%), Positives = 241/500 (48%), Gaps = 57/500 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F+ S + ++VS+L+ ++ ++E++L + V GEIS SSGH YFSLKD+ Sbjct: 1 MKKFTTSVSQET-AFTVSQLNRQIQQLLEASLPWILVEGEISNL-AKPSSGHWYFSLKDD 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I ++KG + F P++G + ++T + Q+ +E + +G G L A Sbjct: 59 KAQIRCAMFKGKNAAVRFKPKDGDMVRLRARVTFYGPRGDCQLSVEGMESAGEGALQQAF 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ K L EGLF+ +HK P+P P+ +A+ITSP GA +RD++ RFPL + I P Sbjct: 119 ERLKNTLQAEGLFAPEHKKPLPTKPERVAIITSPIGAAVRDMVIAFRRRFPLTELTILPS 178 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + K I + + D IIL RGGGS+EDLW FNDE + RAI + Sbjct: 179 LVQGQDAAKNILRQLQR------ADGSGHFDAIILGRGGGSLEDLWSFNDETLARAIFAA 232 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SA+GHETD+T+AD+ AD+RA TPT AAE+ P + HL + E +L + R+ Sbjct: 233 QTPIVSAVGHETDFTIADFVADVRAATPTAAAELLSPDRNHLVRQIEQQEKQLARRMSRI 292 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ L+ ++K + + + + + +LD+L R L+ +++ + + ++ +R++ Sbjct: 293 LEQSQQQLDFMIKRIRHPKERIEQQQIQLDQLKRRLQQSMQRKVIEQQTQTANLAHRLER 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + I ++RQ + + + Sbjct: 353 NSPSRRIDQDRQKLKNMDARLAR------------------------------------- 375 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 LS+ + + T+ + L + NTL RGY + I +++ Sbjct: 376 ----------ALSNTLTNKQTTFARIIDKLNLVSPLNTLARGYAIA-SKDEQVIRSVKDV 424 Query: 480 ATKTRILINFFDGQANAIVI 499 I + DG + V Sbjct: 425 KAGDSISVRVQDGVLSCDVT 444 >gi|295706549|ref|YP_003599624.1| exodeoxyribonuclease VII large subunit [Bacillus megaterium DSM 319] gi|294804208|gb|ADF41274.1| exodeoxyribonuclease VII, large subunit [Bacillus megaterium DSM 319] Length = 446 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 146/492 (29%), Positives = 231/492 (46%), Gaps = 58/492 (11%) Query: 15 YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ ++K V+ ++ V ++GEIS ++ HS GH YF+LKD ++RI A+++ G Sbjct: 7 LTVTALTRYIKRKFDVDPHMQDVWIKGEISNFK-RHSRGHMYFTLKDQNARIAAVMFAGH 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ F PEEG+ L+ +I+ + S YQ+ ++ + P G G L A E+ KKKL +EGL Sbjct: 66 NRQLNFQPEEGMNVLIRAEISVYEPSGNYQMYVKEMQPDGVGNLYLAYEQLKKKLEKEGL 125 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192 F K +P P I VITSPTGA +RDI+ + R+ +I+ P VQG I Sbjct: 126 FDPARKRKLPKYPTTIGVITSPTGAAVRDIITTLKRRYNANIIVMPALVQGVNAAPSIIK 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + N KE D++I+ RGGGSIE+LW FN+E + RAI S+IP+ISA+GHETD Sbjct: 186 AIEEANRRKEA------DVLIVGRGGGSIEELWAFNEESVARAIFTSTIPVISAVGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTPTGAAE+AVP + L RL + +++ L K Sbjct: 240 FTIADFVADLRAPTPTGAAELAVPHISEITERLTQRNIRLLRSMKEMLQSSSRRLERSQK 299 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + +LD+L I K ++ + + + H + K Sbjct: 300 SYAFRYPQKLVEQKEQQLDQLMERFYREGRRYIEHKRTNYEQLTAALLRNHPEHQLTKAA 359 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + L + Sbjct: 360 ERQQQ-----------------------------------------------LTKMLTKE 372 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +K + T L + + T++RGY+ + D I + ++ + + Sbjct: 373 MQQLLKQKQLLFATATSKLHTLSPLKTMERGYSLVYDKEKELIKSTKQVSKGDVVNVRLT 432 Query: 491 DGQANAIVINKA 502 DGQ V Sbjct: 433 DGQLQCEVSKIE 444 >gi|117919683|ref|YP_868875.1| exodeoxyribonuclease VII large subunit [Shewanella sp. ANA-3] gi|158512316|sp|A0KUK0|EX7L_SHESA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|117612015|gb|ABK47469.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. ANA-3] Length = 448 Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats. Identities = 144/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ I+E L V + GEIS + SSGH Y +LKD++S+I ++KG Sbjct: 6 NNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSA-PSSGHWYLTLKDHYSQIRCAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ++IES++P+G G L E K KL +G Sbjct: 65 RNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K +P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ I Sbjct: 125 LFAADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADMNI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+GHE Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T++DY AD+RAPTP+ AE+ ++ L + +RL + L+ L Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSASHYQLKQEKRLSLL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L +TL R D + LE L + R + NR++ H + Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEQQSPKHKLAL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++ Sbjct: 359 ETNRLSYLATRLQ----------------------------------------------- 371 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + ++ L++ + TL RGY+ D NN I L+ +I Sbjct: 372 DAMQDTLNQSEQRITYAAHQLETVSPLATLSRGYSITTDANNQVIDNAAQLSVGDKINTR 431 Query: 489 FFDGQANAIVINKAPPK 505 GQ + V Sbjct: 432 LRHGQVQSTVTQITDES 448 >gi|330991091|ref|ZP_08315045.1| Exodeoxyribonuclease 7 large subunit [Gluconacetobacter sp. SXCC-1] gi|329761912|gb|EGG78402.1| Exodeoxyribonuclease 7 large subunit [Gluconacetobacter sp. SXCC-1] Length = 486 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 160/493 (32%), Positives = 268/493 (54%), Gaps = 29/493 (5%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + PE+SV+E+S ++ +E + VRGEI+ ++ SGH YFSLKD ++ +++W+ Sbjct: 15 NTPEFSVAEISGAIRRTLEGTFGRIRVRGEITEFKRYP-SGHLYFSLKDEGGKLSSVVWR 73 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 GT++++ PE G+E + GKI+ + S YQ++I+ L +G G LL +E+ + L EE Sbjct: 74 GTVSRLGLKPENGVEVIATGKISAYGERSSYQMVIDRLEYAGEGALLARIERLRLSLAEE 133 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF K P+PF+P++I V+TS GAV+ DI I+ RFP RV+++PV VQGD + I Sbjct: 134 GLFDSARKRPLPFLPRVIGVVTSAQGAVLHDIRTTIARRFPHRVLVWPVPVQGDGAAERI 193 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI + ++ PRPD++I+ARGGGS+EDL FNDE ++RA+A IP+ISA+GHE Sbjct: 194 AQAIAGFDRIEGSPALPRPDVLIVARGGGSLEDLMAFNDEGVLRAVAACRIPVISAVGHE 253 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TL D+ +D RAPTPT AAEMAVPV+ L+++L +ARL + R ++ L+ Sbjct: 254 TDTTLVDFVSDCRAPTPTAAAEMAVPVRAELEAALAQRDARLRGGLGRCLQLARARLDRA 313 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 LP+ + +R RLD L L+ L + + +R+ + ++ Sbjct: 314 AAGLPDLPGVVENARRRLDDLGYRLDLALPARVHAMRGRLQNASDRLPAPHML------- 366 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + ++ + ++ + + + + AIL LR + Sbjct: 367 --LALRRADLARVGTASQQAMGALLRRREAILAGLRVPPAVLVS---------------- 408 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++++ + ++ T L + + + L+RGY + D+ + +++ F Sbjct: 409 ---QLRASTSRLAGTGGRLDALSPRAVLERGYVLVTDSAGRPLAHAAQARGAPEVVMTFA 465 Query: 491 DGQANAIVINKAP 503 DG+ A + +A Sbjct: 466 DGKVAARPLGEAS 478 >gi|330829941|ref|YP_004392893.1| exodeoxyribonuclease 7 large subunit [Aeromonas veronii B565] gi|328805077|gb|AEB50276.1| Exodeoxyribonuclease 7 large subunit [Aeromonas veronii B565] Length = 459 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 141/509 (27%), Positives = 241/509 (47%), Gaps = 57/509 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P S N + ++V+ L+ ++ I+E +L V + GE+S + SSGH YFSLKD Sbjct: 5 TPSSAANGREQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNL-AMPSSGHWYFSLKDMS 63 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ ++KG ++ F P++G++ LV +++ + YQ+IIES+ P+G G L E Sbjct: 64 AQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRFE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K++L EGLF + K P+P P+ + ++TS TGA + D+L + R P L V I+P + Sbjct: 124 ELKRRLGAEGLFDESRKRPLPREPRAVGLVTSSTGAALHDMLTVLKRRAPDLPVFIYPTQ 183 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I AI + N E D++I+ RGGGS+EDLW FN+E + RAIA+S+ Sbjct: 184 VQGSAAISQIVAAIAKANQRAE------VDVLIVGRGGGSLEDLWCFNEEAVARAIAHSA 237 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP++SA+GHE D T++D+AADLRAPTP+ AAE+ P + L++L+ RL + R Sbjct: 238 IPVVSAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLVHLKQRLLQAMSRQQ 297 Query: 301 KYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L K L + + L RLD L L+ L + Sbjct: 298 TAARHDFILLQKRLDHQDPKRRLEQQSQRLDELSSRLQQLLRQRLH-------------- 343 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + ++ + + L + + + + Sbjct: 344 ----------------QGERRLTNL-----------------ELRLQGKSPERLLAAGKR 370 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + R+ +++ + +++ T L + TL RGY+ + I++ Sbjct: 371 RHQLAEERLHALIAKRQDLASHRLAMLTARLDGVSPLATLGRGYSITRTARGEVISRADQ 430 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQ 507 + + +++ G V Q Sbjct: 431 VNSGDQLVTTLAQGSLQVRVEEVIKDSAQ 459 >gi|290475587|ref|YP_003468475.1| exonuclease VII, large subunit [Xenorhabdus bovienii SS-2004] gi|289174908|emb|CBJ81709.1| exonuclease VII, large subunit [Xenorhabdus bovienii SS-2004] Length = 455 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 146/504 (28%), Positives = 234/504 (46%), Gaps = 57/504 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +SVS L+ ++ ++E + + + EIS + SSGH YF+LKD ++I A + Sbjct: 4 PTNTGIFSVSRLNQTVRQLLELEMGRIWLSAEISNF-SQPSSGHWYFTLKDERAQIRAAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ + + F P+ G + LV +IT + YQ+I+ES+ P+G G L E K+KL Sbjct: 63 FRSSNLRATFRPQNGQQVLVRAQITLYEPRGDYQLIVESIQPAGDGLLQQQFEILKQKLT 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF HK P+P K + VITS +GA + DIL + R P L +II+P VQG E P Sbjct: 123 SEGLFDSIHKKPLPSPAKRLGVITSASGAALHDILHILKRRDPSLPIIIYPTAVQGAEAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SAI Sbjct: 183 LQIIRAIELANDRQE------CDVLIVGRGGGSLEDLWCFNDEQVARAIFQSRIPIVSAI 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L + +L+ RL + K+ Sbjct: 237 GHETDVTIADFIADLRAPTPSAAAELVSRNQIELLRQVQSLQQRLEMAMDYFFAQKLRIF 296 Query: 308 NSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N+L L L +R + L ++L +L + + + + R+ Sbjct: 297 NTLQHQLQQQRPDLRLARQQNKLVELRQKLVDSLLRCLKQHFLSHEKLNLRLLQTNPEQQ 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I+ Q I + ++Q Sbjct: 357 IRHYSQQIQQYDFRLKQ------------------------------------------- 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + ++ +++ L + + TL+RGY+ + + + + + + + Sbjct: 374 ----AIERQLGHYREKFAVSCSQLNAVSPLATLQRGYSISETADGTLLKETKQVKVGDTL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPT 509 DG + VI P ++ Sbjct: 430 NTRLQDGWVKSQVIQVKRPTKREK 453 >gi|304398576|ref|ZP_07380448.1| exodeoxyribonuclease VII, large subunit [Pantoea sp. aB] gi|304353787|gb|EFM18162.1| exodeoxyribonuclease VII, large subunit [Pantoea sp. aB] Length = 457 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 143/505 (28%), Positives = 226/505 (44%), Gaps = 57/505 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++VS L+ ++ ++E + V + EIS + +SGH YF+LKD+ +++ +++ Sbjct: 7 ANIFTVSRLNTTVRQLLEKEMGLVWISAEISNFT-QPASGHWYFTLKDDGAQVRCAMFRN 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++ F P+ G + LV IT + YQ+I ES+ P+G G L E K KL EG Sbjct: 66 SNRRVTFRPQHGQQVLVRANITLYEPRGDYQLIAESMHPAGEGLLQQQFELLKAKLATEG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF QHK P+P + + VITS TGA + D+L+ + R P L V+I+P VQG + P I Sbjct: 126 LFDPQHKQPLPEPARQVGVITSSTGAALHDVLRVLHRRDPSLPVVIYPTVVQGVDAPAAI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHE Sbjct: 186 VRAIEIANLRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+ + L L + + RL + + + L Sbjct: 240 TDVTIADFVADLRAPTPSAAAEIVSRNQLELLRQLQSQQQRLEMAMDYYLARQQRLYTRL 299 Query: 311 LKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L L +R + RL + L +E + R + + R+ + + + Sbjct: 300 EHRLQQQHPQLRLARQQTALFRLQQRLGEAMETRLRHATRQQDRLSQRLNAQQPQQRLFE 359 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + ++Q + Q L Sbjct: 360 AQKQLQNWHYRLQQSITQQLNSNRQH---------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L+ + TL RG++ DT + + L + + Sbjct: 386 -------------FGQLVAQLEGVSPLATLARGFSVTTDTTGQVVKKTAQLQSGDLLRTR 432 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQ 513 DG + V P K++ K Sbjct: 433 LDDGWVESQVTQLLPEKKRRRKTAS 457 >gi|260773380|ref|ZP_05882296.1| exodeoxyribonuclease VII large subunit [Vibrio metschnikovii CIP 69.14] gi|260612519|gb|EEX37722.1| exodeoxyribonuclease VII large subunit [Vibrio metschnikovii CIP 69.14] Length = 440 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 226/492 (45%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + Y+VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 2 TNPNIYTVSRLNAEVRLLLENEMGIVWLIGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG + F P+ G + LV +++ + YQIIIES+ P G G L E+ K +L Sbjct: 61 KGNNRSVSFKPQNGQQVLVKARLSLYEPRGDYQIIIESMQPEGDGRLQQEFEQLKMRLAA 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P P+ + VITS TGA + DILQ + R P L +II+P VQG E Sbjct: 121 EGLFAQSLKKTLPEHPRCVGVITSKTGAALHDILQVLKRRDPSLPIIIYPTIVQGSEAAI 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA AI N+ E D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+G Sbjct: 181 SIAQAIGCANSRAE------CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ + + S+ + +L N I + N L Sbjct: 235 HEVDVTIADFVADMRAPTPSAAAELVSRDNSNKKQSVNQKQHQLTNSIRYYFAQQKNQLQ 294 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L R +LD L +L ++ + + + +R++ + Sbjct: 295 QLQHRLDKQHPAHRLQRQRQQLDELTLQLTQVMQRRLMLLAKGVSQQQHRLQLRSPEKQL 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ Q + + Sbjct: 355 SAQKHQLMMSQHQLRKA------------------------------------------- 371 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ + L + + TL RGY+ Q+ + I K + + I+ Sbjct: 372 ----MERQLLDAQHRYARLVDKLHTVSPLATLSRGYSITQNEHGEVIHTKDQVQSGEVIV 427 Query: 487 INFFDGQANAIV 498 G + V Sbjct: 428 TRLAQGDIRSTV 439 >gi|212638786|ref|YP_002315306.1| exodeoxyribonuclease VII large subunit [Anoxybacillus flavithermus WK1] gi|212560266|gb|ACJ33321.1| Exonuclease VII large subunit [Anoxybacillus flavithermus WK1] Length = 449 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 166/492 (33%), Positives = 249/492 (50%), Gaps = 59/492 (11%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+ L+ ++K E +L + ++GEIS + HS GH YF+LKD +RI A+++ G Sbjct: 8 TVAALTKYIKRKFEVDPHLQDLWIKGEISNFT-YHSRGHMYFTLKDEQARIQAVMFAGYN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G+ LV G+I+ + S YQ+ ++ + P G G L A E+ KKKL +EGLF Sbjct: 67 RQLTFKPENGMTVLVRGEISVYEPSGTYQVYVKEMQPDGVGALYLAYEQLKKKLEQEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +HK PIP P+ I V+TSPTGA IRDIL I R+PL +VI+FP VQG++ P I Sbjct: 127 AKEHKKPIPKFPQHIGVVTSPTGAAIRDILTTIRRRYPLAKVILFPTLVQGEQAPLSIVQ 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I + N + D++I+ RGGGSIE+LW FN+E++ RAI S +PIISA+GHETD Sbjct: 187 SIQKANDIGY------IDVLIVGRGGGSIEELWAFNEEIVARAIFASRVPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTPTGAAE+AVP L S + + +ARL + + L SL Sbjct: 241 YTIADFVADLRAPTPTGAAELAVPHVADLLSRVSDQQARLIRATKERLNAEQKRLQSLRS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + +LD L L+ + ++ +K + + + I+K Sbjct: 301 SYAFRYPKRLYEQKEQQLDMLVDRLQRQMNDMLKQKEHKLQQLQLTLFAHHPQSRIEKAA 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 I QQ I + + ++ Sbjct: 361 DRIRTLQQTIVRNMNDVMK----------------------------------------- 379 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 S++ T L + + ++RGY+ D I L T R+ I F Sbjct: 380 ------QKKWSLATTMAKLDALSPLKIMERGYSLAYDEQETLIKTVTQLQTGDRVHIRFQ 433 Query: 491 DGQANAIVINKA 502 DG+A+ IV N Sbjct: 434 DGRAHCIVSNIE 445 >gi|120554649|ref|YP_959000.1| exodeoxyribonuclease VII large subunit [Marinobacter aquaeolei VT8] gi|120324498|gb|ABM18813.1| Exodeoxyribonuclease VII large subunit [Marinobacter aquaeolei VT8] Length = 451 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 152/506 (30%), Positives = 233/506 (46%), Gaps = 58/506 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P+ +VSEL++ +H++ES+ V V GE+SG+ SSGH YFSLKD Sbjct: 3 TPYPDTRPRA---LTVSELNHQARHLLESSFMQVWVEGELSGF-SRPSSGHWYFSLKDQK 58 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +I +++G +I LP EG + + GK+T + +QII+E L P+G G L A E Sbjct: 59 CQIRCAMFRGANQRIRTLPREGDQIRIRGKVTLYENRGDFQIIVEHLEPAGLGALQQAFE 118 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K +L EGLF K PIP P+ I V+TSPTGA I DIL + R P + V ++P Sbjct: 119 ALKARLQGEGLFDPARKKPIPATPRHIGVVTSPTGAAIHDILTVLKRRCPAIPVTLYPTA 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I AI + + D++I+ RGGGS+EDLW FN+E + RAIA Sbjct: 179 VQGQPATADIVQAIDR------AQQHGLADVLIIGRGGGSLEDLWCFNEEAVARAIAACP 232 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP +SA+GHE D T+AD+ ADLRAPTP+ AAE P ++ L + RL RL+ Sbjct: 233 IPTVSAVGHEVDVTIADFVADLRAPTPSAAAEKISPDQQDWLRRLTEQQGRLGQSARRLL 292 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + N L L L + + L R+D L L + + ++ + ++++ R+ + Sbjct: 293 QRLDNQLGHLSARLRDPRRELLEKAQRMDELELRLNKAIRDRLDQQKQKTDYLLQRMSAQ 352 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ R+ ++ + + LR + Sbjct: 353 SPRRTLKTVREQTQRLEERLTLATRHQLRQKDERLQH----------------------- 389 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY ++D N+ + + +L Sbjct: 390 ------------------------IAQTLHVVSPLVTLGRGYAIVKDDNDRIVRKAGDLE 425 Query: 481 TKTRILINFFDGQANAIVINKAPPKE 506 T ++I G +A V E Sbjct: 426 TGSQITARLGHGSVSARVTEINSSSE 451 >gi|183599370|ref|ZP_02960863.1| hypothetical protein PROSTU_02839 [Providencia stuartii ATCC 25827] gi|188021608|gb|EDU59648.1| hypothetical protein PROSTU_02839 [Providencia stuartii ATCC 25827] Length = 459 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 140/512 (27%), Positives = 238/512 (46%), Gaps = 57/512 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + YSVS+L+ ++ +++ + + + EIS + SSGH Y +LKD+ +++ A Sbjct: 2 STQQNSGIYSVSKLNQAVRELLDRQMGKIWLTAEISNF-SQPSSGHWYLTLKDDKAQVRA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +T + YQIIIES+ P+G G L E K+ Sbjct: 61 AMFRGQNARVTFRPQNGQQVLVRASVTLYEPRGDYQIIIESMQPAGEGLLQQRFELLKQM 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K I VITS TGA + DIL + R P L V+I+P VQGD+ Sbjct: 121 LGAEGLFDVTHKQPLPSPAKRIGVITSATGAALHDILHILRRRDPSLPVVIYPTAVQGDQ 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +IA AI N E D++I+ RGGGS+EDLW FN+E++ RAI S +PI+S Sbjct: 181 APAQIARAIELANKRGE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFASRLPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ AD+RAPTP+ AAE+ + L L + + RL + + + Sbjct: 235 AVGHETDITIADFVADVRAPTPSAAAELVSRNQVELIRQLHSAQQRLEMAMDYYLAGQQQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L L L +R + L ++L + + + + R+ L Sbjct: 295 RFSRLQHRLQQQHPQLRLARQQHQLSLLNQKLTQTITRRLQTAQLRHDQLQRRLSQQDLR 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +Q+ + + + Q H++ + Sbjct: 355 PQLQRQHRSLQQTQYHLQNM---------------------------------------- 374 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ + S ++ +++ + TL RG++ + ++ + + + Sbjct: 375 -------MTELLNSYKQRFAVACSKMETVSPLATLARGFSISETSDGAVLKKTSQVKLGQ 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLH 515 ++ DG + V + K + + L Sbjct: 428 KLKTRLNDGWVESEVTDITKMKMKRAPRSVLK 459 >gi|319898458|ref|YP_004158551.1| exodeoxyribonuclease VII large subunit [Bartonella clarridgeiae 73] gi|319402422|emb|CBI75963.1| exodeoxyribonuclease VII large subunit [Bartonella clarridgeiae 73] Length = 475 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 212/530 (40%), Positives = 306/530 (57%), Gaps = 56/530 (10%) Query: 1 MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ F +K+ + E+SVSE++ LK +VE +V VRGEISGYRG+H+SGHAYF+LKD Sbjct: 1 MDLFIEKSVVTNVAEFSVSEIAGALKRVVEEKFGYVRVRGEISGYRGVHASGHAYFALKD 60 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +R++A+IW+G + K++F PEEGIE + +GK+TT+ GSSKYQIIIE+L P+G G L+T Sbjct: 61 DKARLEAVIWRGVIEKLQFPPEEGIEVVAVGKLTTYQGSSKYQIIIETLEPTGVGALMTL 120 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LE RKKKL +EG F D K +P++P+II VITSPTGAVIRDI+ RIS RFPL ++++PV Sbjct: 121 LENRKKKLADEGFFDDAKKKTLPYMPRIIGVITSPTGAVIRDIIHRISDRFPLHILVWPV 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +E+A AI N L +PD+II+ARGGGS+EDLW FNDE +V A++ S Sbjct: 181 RVQGETSGREVAAAITGFNALPLDGVLSKPDLIIVARGGGSLEDLWGFNDEAVVHAVSAS 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IPIISA+GHETDWTL DY AD RAPTPTGAAE AVPVK L++ L +L R + R Sbjct: 241 AIPIISAVGHETDWTLIDYVADWRAPTPTGAAERAVPVKFDLETRLASLSLRFRVGLARY 300 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+S+++ LP DQ + R D + L+ L + +K +F ++ R+ Sbjct: 301 FSFYKQKLSSVVRGLPTVDQLFALPRRSFDEISSRLQRALCVNYDKKRFYFYTLVIRLCP 360 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L NI+ +Q+ E + Sbjct: 361 RLL--NIETAQQNTKEYTVRLH-------------------------------------- 380 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + + R+L++ +Y++ L+RG+ N I + Sbjct: 381 ---------HAFLRSVEKQRVQIEMAFRLLKNTSYQSILERGFVLALGQENKPIKRLVQF 431 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 +I + FFDG+ N N AP K+ ++++ QG LF Sbjct: 432 PRAVKISLRFFDGEINVSTCNSAP------KQFPKPRRLKQQRDDQGTLF 475 >gi|294501202|ref|YP_003564902.1| exodeoxyribonuclease VII, large subunit [Bacillus megaterium QM B1551] gi|294351139|gb|ADE71468.1| exodeoxyribonuclease VII, large subunit [Bacillus megaterium QM B1551] Length = 447 Score = 367 bits (942), Expect = 3e-99, Method: Composition-based stats. Identities = 146/492 (29%), Positives = 231/492 (46%), Gaps = 58/492 (11%) Query: 15 YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ ++K V+ ++ V ++GEIS ++ HS GH YF+LKD ++RI A+++ G Sbjct: 8 LTVTALTRYIKRKFDVDPHMQDVWIKGEISNFK-RHSRGHMYFTLKDQNARIAAVMFAGH 66 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ F PEEG+ L+ +I+ + S YQ+ ++ + P G G L A E+ KKKL +EGL Sbjct: 67 NRQLNFQPEEGMNVLIRAEISVYEPSGNYQMYVKEMQPDGVGNLYLAYEQLKKKLEKEGL 126 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192 F K +P P I VITSPTGA +RDI+ + R+ +I+ P VQG I Sbjct: 127 FDPARKRKLPKYPTTIGVITSPTGAAVRDIITTLKRRYNANIIVMPALVQGVNAAPSIIK 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + N KE D++I+ RGGGSIE+LW FN+E + RAI S+IP+ISA+GHETD Sbjct: 187 AIEEANRRKEA------DVLIVGRGGGSIEELWAFNEESVARAIFTSNIPVISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTPTGAAE+AVP + L RL + +++ L K Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHISEITERLTQRNIRLLRSMKEMLQSSSRRLERSQK 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + +LD+L I K ++ + + + H + K Sbjct: 301 SYAFRYPQKLVEQKEQQLDQLMERFYREGRRYIEHKRTNYEQLTAALLRNHPEHQLTKAA 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + L + Sbjct: 361 ERQQQ-----------------------------------------------LTKMLTKE 373 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +K + T L + + T++RGY+ + D I + ++ + + Sbjct: 374 MQQLLKQKQLLFATATSKLHTLSPLKTMERGYSLVYDKEKELIKSTKQVSKGDVVNVRLT 433 Query: 491 DGQANAIVINKA 502 DGQ V Sbjct: 434 DGQLQCEVSKIE 445 >gi|332185492|ref|ZP_08387240.1| exodeoxyribonuclease VII, large subunit [Sphingomonas sp. S17] gi|332014470|gb|EGI56527.1| exodeoxyribonuclease VII, large subunit [Sphingomonas sp. S17] Length = 473 Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats. Identities = 177/518 (34%), Positives = 255/518 (49%), Gaps = 75/518 (14%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SV ELS LK +VE HV +RGEISGY+ +SGH Y SLKD ++ IDA++WKG N Sbjct: 26 LSVGELSLKLKRMVEGEFGHVRLRGEISGYK-RATSGHVYMSLKDENAVIDAVMWKGAAN 84 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + F P++GIE + G++TTFPG SKYQI++E + +G+G L+ EK K KL EGLF Sbjct: 85 TLPFQPQDGIEVIATGRLTTFPGRSKYQIVVERMELAGAGALMALFEKLKAKLAGEGLFD 144 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194 K +PF+P +I V+TSPTGAVIRDIL R+ R P VI++PVKVQG +E+A A+ Sbjct: 145 RDRKRALPFMPPVIGVVTSPTGAVIRDILHRLEDRCPTHVIVWPVKVQGAGSAEEVAAAV 204 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + ++ G PRPD++I+ARGGGSIEDLW FN+E++VRA+A+ +IPIISA+GHETD T Sbjct: 205 RGFDAIQPGGPVPRPDLVIVARGGGSIEDLWSFNEEIVVRAVADCAIPIISAVGHETDTT 264 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L DYAADLRAPTPT AAE+AVPV L Sbjct: 265 LCDYAADLRAPTPTAAAEIAVPV------------------------------------L 288 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + T++ R R +R + R + + + RQ Sbjct: 289 ADLRLTVASHRQRTERCA-------RRYVERGRERLEAMARLLPKRD--QLLGPQRQRAD 339 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL-SH 433 E +++ + + R+ + + + + Sbjct: 340 EAGARLDRGL-------------------------ERRVTLARGGLDRAGAALRPAILER 374 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYT-SIQDTNNNFITQKRNLATKTRILINFFDG 492 +++ ++ T R++QS L+RGY ++ + + F DG Sbjct: 375 QVERGRDRLASTWRLVQSLNPDRILERGYARITARPGGETLSSAEAARAADTLTLRFRDG 434 Query: 493 QANAIVINKAPPKEQPTK--KCQLHNNKREKQGTQGEL 528 + V + P K + Q +Q L Sbjct: 435 TVDVAVDQGGLERPAPKTYDKPKREPKADPSQPSQPTL 472 >gi|15832625|ref|NP_311398.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. Sakai] gi|168748432|ref|ZP_02773454.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4113] gi|168756281|ref|ZP_02781288.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4401] gi|168761120|ref|ZP_02786127.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4501] gi|168768601|ref|ZP_02793608.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4486] gi|168773577|ref|ZP_02798584.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4196] gi|168778475|ref|ZP_02803482.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4076] gi|168787855|ref|ZP_02812862.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC869] gi|168798880|ref|ZP_02823887.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC508] gi|195936651|ref|ZP_03082033.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. EC4024] gi|208809494|ref|ZP_03251831.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4206] gi|208812852|ref|ZP_03254181.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4045] gi|208821962|ref|ZP_03262282.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4042] gi|209400584|ref|YP_002271979.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4115] gi|254794455|ref|YP_003079292.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. TW14359] gi|261223059|ref|ZP_05937340.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261259390|ref|ZP_05951923.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. FRIK966] gi|291283730|ref|YP_003500548.1| Exodeoxyribonuclease 7 large subunit [Escherichia coli O55:H7 str. CB9615] gi|22095662|sp|Q8XAB0|EX7L_ECO57 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694648|sp|B5Z0X8|EX7L_ECO5E RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|13362841|dbj|BAB36794.1| exonuclease VII large subunit [Escherichia coli O157:H7 str. Sakai] gi|187770677|gb|EDU34521.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4196] gi|188017041|gb|EDU55163.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4113] gi|189003418|gb|EDU72404.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4076] gi|189356589|gb|EDU75008.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4401] gi|189362272|gb|EDU80691.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4486] gi|189368359|gb|EDU86775.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4501] gi|189372263|gb|EDU90679.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC869] gi|189378658|gb|EDU97074.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC508] gi|208729295|gb|EDZ78896.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4206] gi|208734129|gb|EDZ82816.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4045] gi|208742085|gb|EDZ89767.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4042] gi|209161984|gb|ACI39417.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. EC4115] gi|209763428|gb|ACI80026.1| exonuclease VII large subunit [Escherichia coli] gi|209763430|gb|ACI80027.1| exonuclease VII large subunit [Escherichia coli] gi|209763432|gb|ACI80028.1| exonuclease VII large subunit [Escherichia coli] gi|209763434|gb|ACI80029.1| exonuclease VII large subunit [Escherichia coli] gi|209763436|gb|ACI80030.1| exonuclease VII large subunit [Escherichia coli] gi|254593855|gb|ACT73216.1| exonuclease VII, large subunit [Escherichia coli O157:H7 str. TW14359] gi|290763603|gb|ADD57564.1| Exodeoxyribonuclease 7 large subunit [Escherichia coli O55:H7 str. CB9615] gi|320188842|gb|EFW63501.1| Exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. EC1212] gi|320640853|gb|EFX10341.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. G5101] gi|320646296|gb|EFX15223.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H- str. 493-89] gi|320651801|gb|EFX20181.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H- str. H 2687] gi|320657187|gb|EFX24996.1| exodeoxyribonuclease VII large subunit [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662793|gb|EFX30125.1| exodeoxyribonuclease VII large subunit [Escherichia coli O55:H7 str. USDA 5905] gi|320667597|gb|EFX34512.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. LSU-61] gi|326340307|gb|EGD64111.1| Exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. 1125] gi|326344991|gb|EGD68735.1| Exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 str. 1044] Length = 456 Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats. Identities = 145/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N C D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQ------CNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWVESEVKNIQPVKKSRKK 454 >gi|167623307|ref|YP_001673601.1| exodeoxyribonuclease VII large subunit [Shewanella halifaxensis HAW-EB4] gi|189037840|sp|B0TLJ2|EX7L_SHEHH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|167353329|gb|ABZ75942.1| exodeoxyribonuclease VII, large subunit [Shewanella halifaxensis HAW-EB4] Length = 445 Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats. Identities = 136/492 (27%), Positives = 217/492 (44%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ ++E L + + EIS + SGH Y +LKDN S+I ++KG Sbjct: 8 VYTVSRLNGEVRQLLEGQLGRIWLNAEISNF-AAPGSGHWYLTLKDNFSQIRCAMFKGRN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P G + LV G I+ + YQ++IES++P+G G L E K KL EGLF Sbjct: 67 QAVTFRPANGQQVLVKGNISVYEPRGDYQLLIESMLPAGDGLLAQQYEALKMKLAAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIAN 192 + K +P + I V+TSPTGA IRDIL ++ R + VII+P VQG + K I + Sbjct: 127 ASDTKRSLPANIQRIGVVTSPTGAAIRDILHVLARRDASIEVIIYPTPVQGTDAAKSICD 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N+ +E D++++ RGGGS+EDLW FNDE + + NS IP++SA+GHE D Sbjct: 187 AINLANSRRE------VDVLLVTRGGGSLEDLWSFNDEGLAHTLYNSGIPVVSAVGHEVD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T++DY ADLRAPTP+ AE+ ++ L++ +RL K N L + Sbjct: 241 MTISDYVADLRAPTPSAGAELLSKDADNKAQKLLSQLSRLKQSWQHYQLKKQNQLQACEH 300 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + + L D + L+ ++ + ++ +R+ S H + Sbjct: 301 RLQKQDPQRRLQMYEQSFDEMQLRLQQAMQTKLHAYTLKQQNLSSRLASQSPQHRLDLEA 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + + +K R+ Sbjct: 361 QRLSYLSAKLNGAMI--------------------------------DKLKMSEQRL--- 385 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + L + + TL RGY+ + + + Sbjct: 386 ------------AHRAQQLDTVSPLATLSRGYSITLTGEGKVVQSPSDTCVGDTLTTRLR 433 Query: 491 DGQANAIVINKA 502 DG + V+ Sbjct: 434 DGSVTSTVVEVG 445 >gi|238785328|ref|ZP_04629317.1| Exodeoxyribonuclease 7 large subunit [Yersinia bercovieri ATCC 43970] gi|238713781|gb|EEQ05804.1| Exodeoxyribonuclease 7 large subunit [Yersinia bercovieri ATCC 43970] Length = 459 Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats. Identities = 144/510 (28%), Positives = 227/510 (44%), Gaps = 57/510 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ + Sbjct: 4 SSASTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ T + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K+KL Sbjct: 63 FRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF +K +P K + VITS +GA + DILQ + R P L VII+P VQG + P Sbjct: 123 AEGLFDQTNKQSLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIIYPTAVQGADAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+ Sbjct: 183 LQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRGQQF 296 Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L L +R + +L R L + + I R + R+ Sbjct: 297 SRLEHRLQQQHPHLRLARQQTLLLKLQRRLAESAQNQIRLLGRRSEKLQQRLVQAQPQGQ 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + Q + +++ + Q Sbjct: 357 IHRYHQRVQQQEYRLRQ------------------------------------------- 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L ++ I L++ + TL RGY+ Q + R + ++ Sbjct: 374 ----ALERQLNGYRQRFGIACSQLETVSPLATLARGYSVTQTPAGALLKSTRQVQAGDKL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLH 515 DG + + K+ +K Sbjct: 430 TTRLQDGWVESKITQINVAKKPRQRKAAKE 459 >gi|146308505|ref|YP_001188970.1| exodeoxyribonuclease VII large subunit [Pseudomonas mendocina ymp] gi|145576706|gb|ABP86238.1| Exodeoxyribonuclease VII large subunit [Pseudomonas mendocina ymp] Length = 476 Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 232/500 (46%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF++ N LD SVS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 21 DPFARLN-LDREVLSVSQLNNRARLLLEDVFSGIWVEGEISNL-ARPASGHVYFTLKDSQ 78 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 79 AQVRCALFRQNAARVRQALRDGLAVKVRGKVSLFEGRGDYQLILDAVEPAGDGALRLAFE 138 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K +P P+ I +ITSPTGAVIRDI+ R P + + + P Sbjct: 139 ALKEKLGAEGLFSTERKIALPAHPRRIGIITSPTGAVIRDIISVFRRRAPQVELNLIPTA 198 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + + L D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 199 VQGREATAQIVRALQRADAL-------GFDALILARGGGSLEDLWCFNEESVARAVAACV 251 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD ++AD+ AD+RAPTP+ AAE+ P L L NL+ RL + + Sbjct: 252 TPIVSAVGHETDVSIADFVADVRAPTPSAAAELLAPDSSELVQRLHNLQRRLVLHMQGRL 311 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ + + L + + L RLD L L + +Y + R+ + Sbjct: 312 ARERLRLDGVSRRLRHPGERLRQQAQRLDDLDMRLRRAFAQRLANQYERLARLDARLAAQ 371 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 N+ RQ + + + ++ LR Sbjct: 372 HPGRNLALLRQRLDGLAARLPRAMQGQLRSQRQ--------------------------- 404 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D + Sbjct: 405 --------------------QLGALAAQLQIVSPLATLGRGYSILLDERGQAVRSAAQTQ 444 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ + V + Sbjct: 445 PGQRLKARLSEGELDVRVED 464 >gi|226940029|ref|YP_002795102.1| exodeoxyribonuclease VII large subunit [Laribacter hongkongensis HLHK9] gi|226714955|gb|ACO74093.1| XseA [Laribacter hongkongensis HLHK9] Length = 568 Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats. Identities = 135/492 (27%), Positives = 234/492 (47%), Gaps = 57/492 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++ + SVSEL+ + ++E+ + V + GEIS + +SGHAYFSLKD ++I A++ Sbjct: 123 TIQNNIISVSELNRIARELLETAIPPVWISGEISNLT-LAASGHAYFSLKDERAQIRAVM 181 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ L+++ F P+EG+ V G ++ + YQI + + +G G L A E K +L Sbjct: 182 FRNRLSQLGFRPKEGLRVEVRGTVSLYEARGDYQINVSQMQEAGLGALYAAFEALKTRLA 241 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF +Q K P+P PK+I ++TS A +RD+L + R P + V+++P +VQGD P Sbjct: 242 AEGLFDNQLKRPLPAHPKVIGIVTSLQAAALRDVLTTLRRRAPQIPVVLYPTQVQGDTAP 301 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI + ++ D++I+ RGGGSIEDLW FNDE + RAI +P+IS + Sbjct: 302 AQILAAIEAASRRQDA------DVLIVCRGGGSIEDLWAFNDEQVARAIRACRLPVISGV 355 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+AAD+RAPTPT AAE+ P ++ L + Sbjct: 356 GHETDFTIADFAADVRAPTPTAAAELVSPDRDALLA------------------------ 391 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 RL L L + + R + + + ++ I Sbjct: 392 -------------------RLAELDFRLGRAMHHRLDRASQQLDRLA--LRLTHPGERIA 430 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R+ + + + + Q H + ++ L + + + ++ Sbjct: 431 RQRERLAQAEYRLHQ----HWARRQELARLRVVHLQTRLLRARPSQERQQALLASNRQQL 486 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 +S +++ H ++ + L + + L RGY +++ + LA R+ + Sbjct: 487 ARAISTQLERQHHRLAALSARLDALDPQAVLARGYAIVENARGQAVLDPAALAQNERVTL 546 Query: 488 NFFDGQANAIVI 499 G A + Sbjct: 547 RLALGNTGARID 558 >gi|297519643|ref|ZP_06938029.1| exodeoxyribonuclease VII large subunit [Escherichia coli OP50] Length = 438 Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats. Identities = 142/490 (28%), Positives = 227/490 (46%), Gaps = 57/490 (11%) Query: 24 LKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEG 83 ++ ++E + V + GEIS + +SGH YF+LKD+ +++ +++ + ++ F P+ G Sbjct: 1 VRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHG 59 Query: 84 IEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPF 143 + LV IT + YQII+ES+ P+G G L E+ K KL EGLF Q+K P+P Sbjct: 60 QQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPS 119 Query: 144 IPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKE 202 + VITS TGA + DIL + R P L VII+P VQGD+ P +I AI N E Sbjct: 120 PAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPAAVQGDDAPGQIVRAIELANQRNE 179 Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 D++I+ RGGGS+EDLW FNDE + RAI S IP++SA+GHETD T+AD+ ADL Sbjct: 180 ------CDVLIVGRGGGSLEDLWSFNDERVARAIFTSRIPVVSAVGHETDVTIADFVADL 233 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 RAPTP+ AAE+ ++ L + + RL + + + + L L Sbjct: 234 RAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLR 293 Query: 323 CSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 +R + +RL + + LE + R + + R+ I + + I + + + Sbjct: 294 LARQQTMLERLQKRMSFALENQLKRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRL 353 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 + L ++ + Sbjct: 354 AE-----------------------------------------------TLRAQLSATRE 366 Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 L++ + +TL RGY+ T+ N + + + + + DG + V N Sbjct: 367 RFGNAVTHLEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKN 426 Query: 501 KAPPKEQPTK 510 P K+ K Sbjct: 427 IQPVKKSRKK 436 >gi|326941961|gb|AEA17857.1| exodeoxyribonuclease VII large subunit [Bacillus thuringiensis serovar chinensis CT-43] Length = 453 Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats. Identities = 159/499 (31%), Positives = 243/499 (48%), Gaps = 60/499 (12%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKN-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGVGNLHLAYEQLKVRL 119 Query: 128 -LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEEGLFSQVYKKAIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGES 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I AI N ++E D++I+ RGGGSIE+LW FN+EM+ RAI S IPIIS Sbjct: 180 AAPSIVQAIRTANEMRE------IDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIIS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + L+ K Sbjct: 234 AVGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMKELVHKKEE 293 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 KLQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPS 353 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + + Q+ +++ + Sbjct: 354 QKIIQTKVAVETLQKQLQREM--------------------------------------- 374 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 +++ + + L++ + + RGY + D + ++++ Sbjct: 375 --------QTLLQTKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGD 426 Query: 484 RILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 AVSVQLQDGILDCSVSGIE 445 >gi|157376257|ref|YP_001474857.1| exodeoxyribonuclease VII large subunit [Shewanella sediminis HAW-EB3] gi|189037812|sp|A8FY06|EX7L_SHESH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157318631|gb|ABV37729.1| Exodeoxyribonuclease VII [Shewanella sediminis HAW-EB3] Length = 442 Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats. Identities = 140/491 (28%), Positives = 217/491 (44%), Gaps = 57/491 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ ++E L + + EIS + SGH Y +LKDN ++I + ++KG Sbjct: 6 NNVYTVSRLNGEVRQLLEGELGKIWLNAEISNF-AAPGSGHWYLTLKDNFAQIRSAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ+IIES++P+G G L E K KL EG Sbjct: 65 RNRSVTFKPVNGQQVLVKGSISVYEPRGDYQLIIESMLPAGDGLLAQQYEALKMKLAAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190 LF+ K P+P + I VITS TGA I+D+L ++ R + V+I+P +VQGD K I Sbjct: 125 LFAADTKRPMPTNIQKIGVITSATGAAIKDVLHVLARRDSSIEVVIYPTQVQGDSASKSI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N +E D+++L RGGGS+EDLW FN+E + I NS++PI+SA+GHE Sbjct: 185 CKAIQTANARQE------VDVLLLTRGGGSLEDLWCFNNEDLAHEIYNSALPIVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T++DY AD+RAPTP+ AE+ E+ L ARL SL Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSGDAENKSEKLATFIARLKQSWQHYQLKTEQRSRSL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + L + D + L L + + + R+ H + Sbjct: 299 ENRLHRQDPKRKLEQFQQSFDEIQIRLNAALNDKLHKSTLQQQSLSYRLNQQSPQHRLTL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 +H+ + Sbjct: 359 ESKHLDYLTARL-----------------------------------------------N 371 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + K+ S+ + L++ + TL RGY+ QD + + ++ I Sbjct: 372 EGIKGKLNDVEMSLKNSAHQLETVSPLATLSRGYSITQDESGKVLLSSKDTQAGDTITTR 431 Query: 489 FFDGQANAIVI 499 DG+ + VI Sbjct: 432 LLDGEVKSTVI 442 >gi|261820582|ref|YP_003258688.1| exodeoxyribonuclease VII large subunit [Pectobacterium wasabiae WPP163] gi|261604595|gb|ACX87081.1| exodeoxyribonuclease VII, large subunit [Pectobacterium wasabiae WPP163] Length = 464 Score = 366 bits (940), Expect = 5e-99, Method: Composition-based stats. Identities = 139/521 (26%), Positives = 231/521 (44%), Gaps = 58/521 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ F ++VS L+ ++ ++E + + + GEIS SSGH YF+LKD Sbjct: 1 MSQFPSSA-----IFTVSRLNQAVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + K+ F P+ G + L+ IT + YQ++ ES+ P+G G L Sbjct: 55 RAQVRCAMFRTSNRKVTFRPQNGQQVLIRASITLYEPRGDYQLLAESMQPAGDGLLQQQF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K++L EGLF Q K +P K + VITS +GA + DILQ + R P L VI++P Sbjct: 115 EQLKQRLAAEGLFEQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 175 SVQGADAPLQIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHETD T+AD+ DLRAPTP+ AAE+ + L + + RL + Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L L L +R + Sbjct: 289 LAQRNREFTRLHHRLQQQHPQLRLARQQT------------------------------- 317 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + K RQ + + + Q+ + R L+++ + + R Sbjct: 318 -----QLVKLRQRLDDAMKQ--QLRQASRRSERLQQRLMQQQPQTRIHRAQQR------- 363 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 +++L +++ + ++ + + L+ + TL RGY + N + + Sbjct: 364 LQQLSYQMQSAVDRQLNQNKQKLGVACSRLEGVSPLATLARGYNVTTAPDGNVLKNVAQI 423 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520 + DG + V P K+ + + + Sbjct: 424 IPGETLKTRLQDGWVESQVTTLVPNPSSVKKRRKPSSQTPK 464 >gi|215487851|ref|YP_002330282.1| exodeoxyribonuclease VII large subunit [Escherichia coli O127:H6 str. E2348/69] gi|312965422|ref|ZP_07779654.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 2362-75] gi|254783699|sp|B7UGU7|EX7L_ECO27 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|215265923|emb|CAS10332.1| exonuclease VII, large subunit [Escherichia coli O127:H6 str. E2348/69] gi|312289842|gb|EFR17730.1| exodeoxyribonuclease VII, large subunit [Escherichia coli 2362-75] Length = 457 Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats. Identities = 146/508 (28%), Positives = 235/508 (46%), Gaps = 57/508 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+++++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEIGQVWISGEISNFT-QPASGHWYFTLKDDNAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQLKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAEM ++ L + +++ RL + + + Sbjct: 236 VGHETDVTIADFIADLRAPTPSAAAEMVSRNQQELLRQIQSVQQRLGMAMDYFLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L L +R + +RL + + ++ I R + ++ R+ Sbjct: 296 LTLLHHRLQQQHPQLRLARQQTALERLQQRMNLAIDSQIKRTNKRQVRLLQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + Sbjct: 356 RIHRVQSRIQHLEHRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ + L++ + +TL RGY+ T+ + + + + T Sbjct: 374 -----HVHSRLSAMRERFGNAVTHLEAVSPLSTLARGYSVTTVTDGKVLKKVKQVKTGDV 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512 + DG + V K KK Sbjct: 429 MTTRLEDGWVKSEVKGITSAKRAQKKKP 456 >gi|114319854|ref|YP_741537.1| exodeoxyribonuclease VII large subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114226248|gb|ABI56047.1| Exodeoxyribonuclease VII large subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 458 Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats. Identities = 141/507 (27%), Positives = 239/507 (47%), Gaps = 58/507 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + Y+VS+L+ ++ ++E+ L + V GEIS SGH YF+LKD+ ++ Sbjct: 2 VTTASQAPRTVYTVSQLNQEVRSLLETTLPPLWVEGEISNL-ARPRSGHLYFTLKDSAAQ 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ + F P +G LV + +P ++Q++++ + +G G L A E Sbjct: 61 VRCAMFRNRNLLLRFQPGDGQRVLVRARAGLYPARGEFQLVVDHMEEAGEGALRRAFEAL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K +L +EGLF HK P+P P+ + VITSPTGA IRD+L + RFP L V+I+PV VQ Sbjct: 121 KARLEQEGLFDPAHKRPLPAFPRRLGVITSPTGAAIRDVLTVLRRRFPALPVLIYPVPVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ +IA AI + + ++ D++++ RGGGS+EDLW FN+E++ RAI +P Sbjct: 181 GEGAGGQIAAAIEEADRRRD------VDVVLVTRGGGSLEDLWAFNEEVVARAIHACGLP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SA+GHE D T++D AD RAPTP+ AAE+ P L + L RL + + + Sbjct: 235 VVSAVGHEVDVTISDLVADQRAPTPSAAAELISPDGPALLHQVRGLRDRLLQLTTQHHRR 294 Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + LN L + L + Q L RLD L + L H + + R + +H+ R++ Sbjct: 295 ASDRLNGLARRLQARHPGQLLRDRSQRLDELDQRLRHAMAQRLARHTQALDHLRARLRQG 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I++ + L ++ + V+Q Sbjct: 355 DPRLTIRRREEQRLALERRLHAAVRQ---------------------------------- 380 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DTNNNFITQKRNL 479 ++++ +S R L + + TL RGY + + + + Sbjct: 381 -------------QLQAREQRLSGLGRALHAVSPLATLSRGYAIARQGADGPVLRDSTQV 427 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 A + + GQ + V E Sbjct: 428 APGDAVRVRLHRGQLDCRVERVHGEPE 454 >gi|51597150|ref|YP_071341.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis IP 32953] gi|186896244|ref|YP_001873356.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis PB1/+] gi|81825750|sp|Q668A6|EX7L_YERPS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697624|sp|B2K9P2|EX7L_YERPB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|51590432|emb|CAH22072.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis IP 32953] gi|186699270|gb|ACC89899.1| exodeoxyribonuclease VII, large subunit [Yersinia pseudotuberculosis PB1/+] Length = 459 Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats. Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ Sbjct: 2 SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ + + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K + VITS +GA + D+L + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQSHKQPLPSPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + +L+ Q+ +E+ + +R L K+ + + + Q + +I + +++ Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + ++ I L++ + TL RGY+ Q + + + ++ Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 DG + + K+ KK Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455 >gi|153949399|ref|YP_001400174.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis IP 31758] gi|166919635|sp|A7FFZ6|EX7L_YERP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|152960894|gb|ABS48355.1| exodeoxyribonuclease VII, large subunit [Yersinia pseudotuberculosis IP 31758] Length = 458 Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats. Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ Sbjct: 2 SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ + + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K + VITS +GA + D+L + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQSHKQPLPRPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + +L+ Q+ +E+ + +R L K+ + + + Q + +I + +++ Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + ++ I L++ + TL RGY+ Q + + + ++ Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 DG + + K+ KK Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455 >gi|170023547|ref|YP_001720052.1| exodeoxyribonuclease VII large subunit [Yersinia pseudotuberculosis YPIII] gi|226697626|sp|B1JSA8|EX7L_YERPY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|169750081|gb|ACA67599.1| exodeoxyribonuclease VII, large subunit [Yersinia pseudotuberculosis YPIII] Length = 459 Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats. Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ Sbjct: 2 SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ + + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K + VITS +GA + D+L + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQSHKQPLPSPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRTQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + +L+ Q+ +E+ + +R L K+ + + + Q + +I + +++ Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + ++ I L++ + TL RGY+ Q + + + ++ Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 DG + + K+ KK Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455 >gi|228998972|ref|ZP_04158554.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock3-17] gi|228760589|gb|EEM09553.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock3-17] Length = 452 Score = 366 bits (939), Expect = 6e-99, Method: Composition-based stats. Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKC-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE+G++ LV GKI+ + S YQI + + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPEDGMKVLVKGKISVYEASGSYQIYVHDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K PIP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIIATIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N +K+ D +I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIQTANEMKD------IDALIVGRGGGSIEELWAFNEEMVARAIFASEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + ++ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRTMREMLHKKQEQ 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L +L K+ Q +LDR +L E + +K + ++ Sbjct: 294 LQTLQKSYAFRYPKQVYEQKEEQLDRTLEQLILVKERYVEKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ ++ Sbjct: 354 KIVQTKTRVETLQKQLQREMQ--------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + + +++ Sbjct: 375 --------TLLQTKEFAFMRAAQKLEALSPLKVMMRGYGLVYSEKKQVLKSVKDVDLGDV 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGVLDCNVSGIE 444 >gi|331653937|ref|ZP_08354938.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M718] gi|331048786|gb|EGI20862.1| exodeoxyribonuclease VII, large subunit [Escherichia coli M718] Length = 456 Score = 366 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWVESEVKNIQPVKKSRKK 454 >gi|323188151|gb|EFZ73444.1| exodeoxyribonuclease VII, large subunit [Escherichia coli RN587/1] Length = 457 Score = 366 bits (938), Expect = 6e-99, Method: Composition-based stats. Identities = 145/508 (28%), Positives = 234/508 (46%), Gaps = 57/508 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K +P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QTEGLFDLQYKKSLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANKRNE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAEM ++ L + +++ RL + + + Sbjct: 236 VGHETDVTIADFIADLRAPTPSAAAEMVSRNQQELLRQIQSVQQRLGMAMDYFLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L L +R + +RL + + ++ I R + ++ R+ Sbjct: 296 LTLLHHRLQQQHPQLRLARQQTALERLQQRMNLAIDSQIKRTNKRQVRLLQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + Sbjct: 356 RIHRVQSRIQHLEHRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ + L++ + +TL RGY+ T+ + + + + T Sbjct: 374 -----HVHSRLSAMRERFGNAVTHLEAVSPLSTLARGYSVTTVTDGKVLKKVKQVKTGDV 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512 + DG + V K KK Sbjct: 429 MTTRLEDGWVKSEVKGITSAKRAQKKKP 456 >gi|22125260|ref|NP_668683.1| exodeoxyribonuclease VII large subunit [Yersinia pestis KIM 10] gi|45442510|ref|NP_994049.1| exodeoxyribonuclease VII large subunit [Yersinia pestis biovar Microtus str. 91001] gi|108808307|ref|YP_652223.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Antiqua] gi|108811429|ref|YP_647196.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516] gi|145599489|ref|YP_001163565.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides F] gi|149365332|ref|ZP_01887367.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CA88-4125] gi|162420118|ref|YP_001605016.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Angola] gi|165925952|ref|ZP_02221784.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165937111|ref|ZP_02225676.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166008069|ref|ZP_02228967.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166212567|ref|ZP_02238602.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167399227|ref|ZP_02304751.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421186|ref|ZP_02312939.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423724|ref|ZP_02315477.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929932|ref|YP_002347807.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CO92] gi|229838449|ref|ZP_04458608.1| exonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895150|ref|ZP_04510326.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides A] gi|229899016|ref|ZP_04514160.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229901688|ref|ZP_04516810.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516] gi|270489882|ref|ZP_06206956.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis KIM D27] gi|294504565|ref|YP_003568627.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Z176003] gi|22095669|sp|Q8ZCU2|EX7L_YERPE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|122383061|sp|Q1C5J4|EX7L_YERPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|122384960|sp|Q1CK84|EX7L_YERPN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158514099|sp|A4TMT0|EX7L_YERPP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697625|sp|A9R7Z4|EX7L_YERPG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|21958131|gb|AAM84934.1|AE013738_11 exonuclease VII, large subunit [Yersinia pestis KIM 10] gi|45437375|gb|AAS62926.1| exodeoxyribonuclease VII large subunit [Yersinia pestis biovar Microtus str. 91001] gi|108775077|gb|ABG17596.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516] gi|108780220|gb|ABG14278.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Antiqua] gi|115348543|emb|CAL21483.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CO92] gi|145211185|gb|ABP40592.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides F] gi|149291745|gb|EDM41819.1| exodeoxyribonuclease VII large subunit [Yersinia pestis CA88-4125] gi|162352933|gb|ABX86881.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis Angola] gi|165914974|gb|EDR33586.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165922156|gb|EDR39333.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165992451|gb|EDR44752.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166206498|gb|EDR50978.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166960675|gb|EDR56696.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051731|gb|EDR63139.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057894|gb|EDR67640.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681617|gb|EEO77711.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Nepal516] gi|229687961|gb|EEO80033.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229694815|gb|EEO84862.1| exonuclease VII, large subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701912|gb|EEO89935.1| Exodeoxyribonuclease VII large subunit [Yersinia pestis Pestoides A] gi|262362440|gb|ACY59161.1| exodeoxyribonuclease VII large subunit [Yersinia pestis D106004] gi|262366553|gb|ACY63110.1| exodeoxyribonuclease VII large subunit [Yersinia pestis D182038] gi|270338386|gb|EFA49163.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis KIM D27] gi|294355024|gb|ADE65365.1| exodeoxyribonuclease VII large subunit [Yersinia pestis Z176003] gi|320016006|gb|ADV99577.1| exonuclease VII, large subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 459 Score = 366 bits (938), Expect = 7e-99, Method: Composition-based stats. Identities = 140/506 (27%), Positives = 233/506 (46%), Gaps = 53/506 (10%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ Sbjct: 2 SQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ + + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K + VITS +GA + D+L + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQSHKQPLPHPAKQVGVITSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R Sbjct: 295 QFTRLEHRLQQQHPHLRLARQ--------------------------------------- 315 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + +L+ Q+ +E+ + +R L K+ + + + Q + +I + +++ Sbjct: 316 ----QTLLLKLQRRLEESAQTQIR--LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEY 369 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + ++ I L++ + TL RGY+ Q + + + ++ Sbjct: 370 RLRQAVERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 DG + + K+ KK Sbjct: 430 TTRLQDGWVESEITQVTVAKKSRQKK 455 >gi|82777894|ref|YP_404243.1| exodeoxyribonuclease VII large subunit [Shigella dysenteriae Sd197] gi|309784740|ref|ZP_07679373.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1617] gi|123561921|sp|Q32D53|EX7L_SHIDS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|81242042|gb|ABB62752.1| exonuclease VII, large subunit [Shigella dysenteriae Sd197] gi|308927110|gb|EFP72584.1| exodeoxyribonuclease VII, large subunit [Shigella dysenteriae 1617] Length = 456 Score = 366 bits (938), Expect = 7e-99, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N E D++I+ RGGGS+EDLW FNDE + +AI S IP++SA Sbjct: 182 PGQIVRAIELANQRNE------CDVLIVGRGGGSLEDLWSFNDERVAQAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWVESEVKNIQPIKKSRKK 454 >gi|317049127|ref|YP_004116775.1| exodeoxyribonuclease VII large subunit [Pantoea sp. At-9b] gi|316950744|gb|ADU70219.1| exodeoxyribonuclease VII, large subunit [Pantoea sp. At-9b] Length = 452 Score = 366 bits (938), Expect = 7e-99, Method: Composition-based stats. Identities = 139/508 (27%), Positives = 235/508 (46%), Gaps = 59/508 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S + + ++VS L+ ++ ++E+ + V + EIS + +SGH YF+LKD+ ++ Sbjct: 1 MSLPPTAN--IFTVSRLNTTVRQLLENEMGLVWLSAEISNFT-QPASGHWYFTLKDDGAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ + ++ F P+ G + LV IT + YQ+IIES+ P+G G L E+ Sbjct: 58 VRCAMFRNSNRRVAFRPQHGQQVLVRASITLYEPRGDYQLIIESMHPAGEGLLQQQFEQL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K +L EGLF Q K P+P + + VITS TGA + D+L+ + R P L V+I+P VQ Sbjct: 118 KTRLAAEGLFDQQFKQPLPDPARQVGVITSATGAALHDVLRVLHRRDPSLPVVIYPTAVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + P I AI N E D++I+ RGGGS+EDLW FNDE + RAI S +P Sbjct: 178 GVDAPAAIVRAIELANLRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRLP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHETD T+AD+ ADLRAPTP+ AAE+ + L L + + RL + + Sbjct: 232 IVSAVGHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRRLQSQQQRLEMAMDYYLAQ 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + +L L L +R +L ++L ++ + R + ++ R+ Sbjct: 292 QQRRYTRILHRLQQQHPQLRLARQHTALLQLQQKLHEAMDQRLRSANRQQDRLLQRLNVQ 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I + +Q + + Q ++Q ++ Sbjct: 352 QPQPRILRAQQQLQQWQYRLQQGMQ----------------------------------- 376 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +++ L+ + TL RG++ DT + + + + ++ Sbjct: 377 ------------NQLNQHRQRFGTLAAQLEGVSPLATLARGFSVTTDTQGHVVKKMQQVS 424 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQP 508 + DG + V P K Sbjct: 425 KGDLLRTRLDDGWVESEVTALTPRKSAR 452 >gi|228992928|ref|ZP_04152852.1| Exodeoxyribonuclease 7 large subunit [Bacillus pseudomycoides DSM 12442] gi|228766785|gb|EEM15424.1| Exodeoxyribonuclease 7 large subunit [Bacillus pseudomycoides DSM 12442] Length = 452 Score = 366 bits (938), Expect = 7e-99, Method: Composition-based stats. Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKC-HSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE+G++ LV GKI+ + S YQI + + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFRPEDGMKVLVKGKISVYEASGSYQIYVHDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K PIP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N +K+ D +I+ RGGGSIE+LW FN+EM+ RAI S IPIISA Sbjct: 180 APSIVQAIQTANEMKD------IDALIVGRGGGSIEELWAFNEEMVARAIFASEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ RL + ++ K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVLQRTLRLQRAMREMLHKKQEQ 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L +L K+ Q +LDR +L E + +K + ++ Sbjct: 294 LQTLQKSYAFRYPKQVYEQKEEQLDRTLEQLILVKERYVEKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + + Q+ +++ ++ Sbjct: 354 KIVQTKTRVETLQKQLQREMQ--------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + + L++ + + RGY + + +++ Sbjct: 375 --------TLLQTKEFAFMRAAQKLEALSPLKVMMRGYGLVYSEKKQVLKSVKDVGLGDV 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGVLDCSVSGIE 444 >gi|240140681|ref|YP_002965161.1| putative exonuclease VII, large subunit OB-fold nucleic acid binding domain [Methylobacterium extorquens AM1] gi|240010658|gb|ACS41884.1| putative exonuclease VII, large subunit OB-fold nucleic acid binding domain [Methylobacterium extorquens AM1] Length = 523 Score = 365 bits (937), Expect = 9e-99, Method: Composition-based stats. Identities = 201/550 (36%), Positives = 284/550 (51%), Gaps = 69/550 (12%) Query: 2 NPFSQKN-SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 P + PE+SV +L+ LK +E HV +RGEI+GYRG H SGHAYFSLKD Sbjct: 21 EPAPSALLQANTPEWSVGDLAAALKRTLEDAFGHVRLRGEITGYRGPHGSGHAYFSLKDG 80 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++IDA++WKG L ++ P+EG+E + GKITTF G S YQI+I+S+ P+G G + L Sbjct: 81 SAKIDAVVWKGVLGRLRQKPKEGLEVIATGKITTFAGKSSYQIVIDSMEPAGIGAWMALL 140 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+RK++L EGLF K PIPF+P++I V+TSPTGAVIRDIL R+ RFP V+++PV+ Sbjct: 141 EERKRQLAAEGLFETDRKRPIPFLPRVIGVVTSPTGAVIRDILHRLEDRFPRPVLVWPVR 200 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +EIA AI N L PRPD++I+ARGGGSIEDLW FN+E +VRA A S Sbjct: 201 VQGEGAAEEIAAAIRGFNALSPDGPIPRPDVLIVARGGGSIEDLWAFNEEAVVRAAAESE 260 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+D RAPTPTGAAEMAVPV+ L + + L AR ++R I Sbjct: 261 IPLISAVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELAAQVHELGARQAGTMLRRI 320 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + +L++A+P +D L+ R RLD + + Sbjct: 321 ERERADFRALVRAIPGADAFLAVKRQRLD-----------------------LADARLRP 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L N + +R+ + + + R + E A L + + + + + Sbjct: 358 ALAANARDSRERLNRVADRLTR------RSPAIALAEARARLAAIDHRPRTAMSRIVER- 410 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + T +L + +YK L RGY ++D + + A Sbjct: 411 -----------------RRDRLDALTSLLGALSYKAVLARGYALVRDADGLPVRSADAAA 453 Query: 481 TKTRILINFFDGQANAIVIN-----KAPPKEQPTKKCQLHNNKREK-------------- 521 R + F DG A APP + + + Sbjct: 454 RAARFQLQFADGALFARPEEAPDDPVAPPLVEAPRSAPRPKRAPRRAAPEPAPKPEKAAA 513 Query: 522 --QGTQGELF 529 QG LF Sbjct: 514 EPAARQGSLF 523 >gi|50122132|ref|YP_051299.1| exodeoxyribonuclease VII large subunit [Pectobacterium atrosepticum SCRI1043] gi|81827053|sp|Q6D286|EX7L_ERWCT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|49612658|emb|CAG76108.1| exodeoxyribonuclease VII large subunit [Pectobacterium atrosepticum SCRI1043] Length = 462 Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 139/519 (26%), Positives = 230/519 (44%), Gaps = 58/519 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ F ++VS L+ ++ ++E + + + GEIS SSGH YF+LKD Sbjct: 1 MSQFPSSA-----IFTVSRLNQTVRQLLEMEMGQIWLSGEISNL-SQPSSGHWYFTLKDE 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + ++ F P+ G + ++ IT + YQ++ ES+ P+G G L Sbjct: 55 RAQVRCAMFRTSNRRVTFRPQNGQQIIIRATITLYEPRGDYQLLAESMQPAGDGLLQQQF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K++L EGLF Q K +P K + VITS +GA + DILQ + R P L VI++P Sbjct: 115 EQLKQRLAAEGLFDQQFKQVLPSPAKQVGVITSVSGAALHDILQVLQRRDPSLPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 175 SVQGAEAPLQIVRAIELANQRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHETD T+AD+ DLRAPTP+ AAE+ + L + + RL + Sbjct: 229 RIPIVSAVGHETDVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYY 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L L L +R Sbjct: 289 LAQRNREFTRLHHRLQQQHPQLRLARQ--------------------------------- 315 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + K RQ + + Q Q+ + R L+++ + + R Sbjct: 316 ---QAQLVKLRQRLDDAMQQ--QLRQTSRRSERLQQRLMQQQPQTRIHRAQQR------- 363 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 +++L +++ + ++ + + L+ + TL RGY ++ + + Sbjct: 364 LQQLSYQMQSAVDRQLNQNKQKLGVACSRLEGVSPLATLARGYNVTTASDGKVLKNVAQI 423 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518 + DG + V AP K+ + + Sbjct: 424 TPGETLKTRLQDGWVESQVTTLAPNLSSVKKRRKSSSQS 462 >gi|114046810|ref|YP_737360.1| exodeoxyribonuclease VII large subunit [Shewanella sp. MR-7] gi|123326712|sp|Q0HX52|EX7L_SHESR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|113888252|gb|ABI42303.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. MR-7] Length = 448 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 144/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ I+E L V + GEIS + SSGH Y +LKD++S+I ++KG Sbjct: 6 NNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSA-PSSGHWYLTLKDHYSQIRCAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ++IES++P+G G L E K KL +G Sbjct: 65 RNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K +P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ I Sbjct: 125 LFAADTKRQLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGESADLNI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+GHE Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T++DY AD+RAPTP+ AE+ ++ L + +RL + L+ L Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSANHYQLKQERRLSLL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L +TL R D + LE L + R + NR++ H + Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLANRLEKQSPKHKLAL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++ ++ Sbjct: 359 ETNRLNYLATRLQDAMQD------------------------------------------ 376 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + L++ + TL RGY+ D NN I L+ +I Sbjct: 377 -----TLNQSEQRIKYAAHQLETVSPLATLSRGYSITTDANNQIIDNAAQLSVGDKINTR 431 Query: 489 FFDGQANAIVINKAPPK 505 GQ + V Sbjct: 432 LRHGQVQSTVTQITDES 448 >gi|325142529|gb|EGC64929.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis 961-5945] Length = 451 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 134/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K ++E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPTRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRP---------- 351 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + +I L T + S Sbjct: 352 ---------------------------------------DVSVCKNNIVCLQTALPAAFS 372 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 373 QLLTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|237749550|ref|ZP_04580030.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes OXCC13] gi|229380912|gb|EEO31003.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes OXCC13] Length = 444 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 142/495 (28%), Positives = 243/495 (49%), Gaps = 57/495 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P +VSEL+ I+E + + V GEIS +SGH YF+LKDN++++ +++++ Sbjct: 4 STPVLTVSELNSTAAKILEHSFPLLWVSGEISNLT-KAASGHWYFTLKDNNAQVRSVMFR 62 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F+P++G + V +T + ++Q+ +E++ +G G+L A + K KL +E Sbjct: 63 GKAQSVGFIPKDGDKVEVRAVVTLYTARGEFQLNVEAMRHAGLGSLYEAFLRLKAKLGDE 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF ++ K +P + I ++TSP A +RDIL +S R P + VI++P VQG++ + Sbjct: 123 GLFDEERKRNLPVFARTIGIVTSPQAAALRDILTTLSRRAPHVNVILYPTPVQGEDAAGK 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA+A+ + E D++++ RGGGSIEDLW FN+E++ RAIA SIP IS +GH Sbjct: 183 IASAVTLASVRAE------CDVLLICRGGGSIEDLWSFNEEVVARAIATCSIPTISGVGH 236 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+T+AD+AAD+RAPTPTGAAEMA + +L L L + RL++ + Sbjct: 237 ETDFTIADFAADVRAPTPTGAAEMASRAHQDWMDNLETLADDLRMAMERLLRNAFQNTDL 296 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + L + + + RL L +L H + I+ + NH+ R+K+ Sbjct: 297 LARRLISPSSYIEREKIRLQSLAAKLTHTNDTILASSHYRLNHLGTRLKAQLPDTRH--- 353 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + ++ + +++ Sbjct: 354 ----------------------------------------------YRSLLETGLHKMKT 367 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + ++K +S + L+ + K TL+RGY I + N + L + + + Sbjct: 368 GIDTQLKQRKQEISSLAQQLELLSTKRTLERGYAIITNRNGQIVRSPSQLPVRKPLSVQL 427 Query: 490 FDGQANAIVINKAPP 504 +G A + P Sbjct: 428 AEGSAQISIETVQPE 442 >gi|37526604|ref|NP_929948.1| exodeoxyribonuclease VII large subunit [Photorhabdus luminescens subsp. laumondii TTO1] gi|81833959|sp|Q7N3K2|EX7L_PHOLL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|36786036|emb|CAE15088.1| Exodeoxyribonuclease VII large subunit (exonuclease VII large subunit) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 457 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 140/505 (27%), Positives = 234/505 (46%), Gaps = 57/505 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +SVS L+ ++ ++E + + + EIS + SSGH YF+LKD +++ A + Sbjct: 4 PFNTGIFSVSRLNQTVRQLLEMEMGRIWLSAEISNF-SHPSSGHWYFTLKDERAQVRAAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ + ++ F P+ G + LV IT + YQ+I+E++ P+G G L E K+KL Sbjct: 63 FRSSNQRVTFRPQNGQQVLVRAIITLYEPRGDYQLIVENMQPAGDGLLQQQFELLKQKLD 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF HK P+P + + VITS +GA + DIL + R P L +II+P VQG E P Sbjct: 123 AEGLFDQSHKKPLPSPAQQLGVITSTSGAALHDILNILKRRDPSLPIIIYPTSVQGAEAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI +S IPI+SA+ Sbjct: 183 LQIIRAIELANERRE------CDVLIVGRGGGSLEDLWSFNDERVARAIFHSDIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L + + + RL + K + Sbjct: 237 GHETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQQQRLEMAMDYFFAQKQHIF 296 Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L L +R + L + L +L+ + + + + R+ Sbjct: 297 SLLSHRLQQQHPHLRLARQQNLLVNLRQRLTDSLQRYLKQNSLAYEKLQQRLWYAEPSQQ 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I Q I ++ + Q Sbjct: 357 IHHYSQQIQQQDFRLRQ------------------------------------------- 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +I +++ +++ + TL RGY+ Q ++ + Q + + + Sbjct: 374 ----AIERQISRSREKFAVSCSRMEAVSPLATLARGYSISQTSDGKLLKQTKQVDVGDVL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTK 510 DG + V+ +++ + Sbjct: 430 NTRLQDGWIESEVLKIKKERKKRSA 454 >gi|114569179|ref|YP_755859.1| exodeoxyribonuclease VII large subunit [Maricaulis maris MCS10] gi|114339641|gb|ABI64921.1| Exodeoxyribonuclease VII large subunit [Maricaulis maris MCS10] Length = 485 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 188/532 (35%), Positives = 284/532 (53%), Gaps = 56/532 (10%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + E++VSEL+ LK VE HV +RGE+ G + SGH YF +KD+ + I Sbjct: 2 NTPAGNIHEFTVSELAGSLKRTVEDAFGHVRLRGEL-GRVVVAKSGHVYFDIKDDKAVIA 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +I WKGT + F PEEG+E ++ G+++T+PG S+YQ+I+ES+ P+G+G L+ LE+RK+ Sbjct: 61 SIAWKGTAQRFRFRPEEGLEVVIEGRLSTYPGRSQYQLIVESMEPAGAGALMALLEERKR 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 L EGLF K +PF+P+ I V+TSPTGAVIRDIL R+ RFP V+++PV VQGD Sbjct: 121 TLAAEGLFETSRKQALPFLPRTIGVVTSPTGAVIRDILHRLQDRFPCHVLLWPVLVQGDS 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IA AI N L G PRPD++I+ARGGGSIEDLW FN+E++VRA A+S+IP+IS Sbjct: 181 AAAQIAEAIRGFNALPAGGKVPRPDVLIVARGGGSIEDLWAFNEEVVVRAAADSTIPLIS 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TL D+A+D RAPTPTGAAEMAVPV+ L++SL L RL + R I+ + Sbjct: 241 AVGHETDTTLIDFASDRRAPTPTGAAEMAVPVRAELKASLDQLGGRLVAGLSRHIERRRT 300 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L S +ALP + R R D + +L+ L K + +K L + Sbjct: 301 ELRSAARALPRPAALMELKRQRFDMIADKLDPALLNHAAEKRGRLLVLAAGLKPAALSRD 360 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ R + E+ + ++ R + Sbjct: 361 LRQKRTLLDERAARLGPAAERLRRDRQRDLDN-------------------------WSA 395 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ ++ ++++ LKRG+ ++D + +L I Sbjct: 396 RL----------------------EALSHQSVLKRGFVLVRDRAGKLVRSGGSLMEGAGI 433 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK--------CQLHNNKREKQGTQGELF 529 + F DG+ A + + +++P + + + + QG LF Sbjct: 434 DLVFADGERAARIEGERGSRKRPPETPDLPKKTKPKPKPRSKPEAAGQGRLF 485 >gi|308050450|ref|YP_003914016.1| exodeoxyribonuclease VII large subunit [Ferrimonas balearica DSM 9799] gi|307632640|gb|ADN76942.1| Exodeoxyribonuclease VII large subunit [Ferrimonas balearica DSM 9799] Length = 444 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 140/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S + ++VS L+ +K ++E + + GEIS + SSGH YF+LKD+ S++ + Sbjct: 2 SASNAVFTVSALNRQIKALLEQQWGRIWLSGEISNL-AMPSSGHWYFTLKDDRSQLRCAM 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +K ++ F PE G++ LV +T + Q+++ES+ P+G G L E K +L Sbjct: 61 FKSRTARVGFRPEHGMQVLVRANLTMYEPRGDLQLVVESMQPAGDGLLQQRFEALKMQLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ + K +P + + VITSP+GA ++D+L + R P L VII+P +VQG E Sbjct: 121 AEGLFAMEAKQCLPHPIRRLGVITSPSGAAVQDVLSVLKRRDPMLEVIIYPSQVQGAEAT 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N E D I+L RGGGS+EDLW FN+E + RAI +S +PI+SA+ Sbjct: 181 GQICQAIATANARDE------VDAILLTRGGGSLEDLWCFNEEAVARAIYHSRLPIVSAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+ADY ADLRAPTP+ AAE+ L RL I ++ + L Sbjct: 235 GHEVDTTIADYVADLRAPTPSAAAELLSQDAGLRLDRLQRDRQRLAQAIGAQLRGQQQRL 294 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L + + L RLD L L+ + + ++ + + R+ Sbjct: 295 VLLATRLNGNHPSRKLEQHAQRLDELSLRLDRAMTAQVSQRAQTVERLEARLNRFHPTPR 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + Q + + + + + Q L L + Sbjct: 355 LAALGQQLNGLEHRLNRAIGQQLHQGRLTLAGR--------------------------- 387 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L++ + L RGY+ +QD I + R+ Sbjct: 388 --------------------AAALEAVSPLAVLSRGYSILQDEQGQTIKSTEQVEVGQRL 427 Query: 486 LINFFDGQANAIVINKA 502 G V + Sbjct: 428 TARLHQGSLGLKVTDTE 444 >gi|229086755|ref|ZP_04218921.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-44] gi|228696576|gb|EEL49395.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus Rock3-44] Length = 452 Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats. Identities = 156/498 (31%), Positives = 241/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K PIP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI + N + E D++I+ RGGGSIE+LW FN+E + RAI S+IPIISA Sbjct: 180 APSIVQAIRKANEMNE------IDVLIVGRGGGSIEELWAFNEESVARAIFTSAIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ R+ + ++ + Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPNILELQEKVLQRTLRMQRAMREMVHKRQEQ 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L +L K+ Q +LDR +L I +K + ++ Sbjct: 294 LQTLQKSYAFRYPRQVYEQKEEQLDRALEQLMLAKGRYIDKKVNQLQQLSFYLEKHHPSQ 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I Q+ I++ ++ ++ Sbjct: 354 KILQTKTKIEILQKQIQREMQTLMQTKEFAFMR--------------------------- 386 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + L++ + + RGY + + + ++ Sbjct: 387 --------------------AAQKLEALSPLKIMMRGYGLVYSEEKQVLKSVKGVSLGDG 426 Query: 485 ILINFFDGQANAIVINKA 502 + + DG + V Sbjct: 427 VSVQLQDGVLDCNVAGIE 444 >gi|209544981|ref|YP_002277210.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter diazotrophicus PAl 5] gi|209532658|gb|ACI52595.1| exodeoxyribonuclease VII, large subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 486 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 161/499 (32%), Positives = 258/499 (51%), Gaps = 32/499 (6%) Query: 2 NPFSQKNSL---DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 P + + PEYSVSE+S ++ +E V VRGEI+ ++ SGH YFSLK Sbjct: 3 EPLRDSGTAGAGNVPEYSVSEISGAIRRTLEGTFGRVRVRGEITEFKRYP-SGHLYFSLK 61 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D +I +++W+G+++++ PE G+E + GKI+++ S YQ+II+ L +G G LL Sbjct: 62 DEGGKISSVVWRGSVSRLGLKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALLA 121 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 +E+ + KL EGLF K +PF+P +I V+TS GAV+ DI I+ RFP R++++P Sbjct: 122 RIERLRLKLAAEGLFDAAGKRALPFLPDVIGVVTSAQGAVMHDIRTTIARRFPRRLLVWP 181 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG+ +IA AI + + PRPD++I+ARGGGS+EDL FNDE+++RA A Sbjct: 182 VAVQGEAAAAQIAAAIAGFDAIDGRGPIPRPDVLIVARGGGSLEDLMAFNDEVVLRAAAA 241 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 IP+ISA+GHETD TL D+ +D RAPTPT AAE+A P + L + L + ARL + + R Sbjct: 242 CRIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAAPARAELVADLGHRAARLTSGLAR 301 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 L + L+ LP+ L +R RLD L+ L ++ R+ + + Sbjct: 302 LTQTLRLRLDRAAARLPDLPSLLGTARMRLDDRGHRLDMALPALVARRRAALLAVERAMP 361 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 S L+ ++ + + ++ A R + Sbjct: 362 SASLL---------TGPRRARLALAASHLQSGLRQALRDGHARADRTRLRPAP------- 405 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 L+ ++ ++ L+S + L+RGY ++D +T+ + Sbjct: 406 ------------LAAMLRERRAHLAGLAGRLESLSPMAVLERGYVLVRDPAGVPVTRAAD 453 Query: 479 LATKTRILINFFDGQANAI 497 + R+++ F DG+A Sbjct: 454 VRPGGRLVLIFADGEAAVR 472 >gi|331005661|ref|ZP_08329028.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium IMCC1989] gi|330420519|gb|EGG94818.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium IMCC1989] Length = 452 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 149/500 (29%), Positives = 239/500 (47%), Gaps = 55/500 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN +NS SVS+L+ K ++E++ + V V GEIS SSGH YFSLKDN Sbjct: 1 MNTLLTENSPKKTLLSVSQLNRRAKQLLETHFAFVWVSGEISNL-AKPSSGHWYFSLKDN 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++K ++ + PE G + + +++ + G +YQ+I+E + +G G L Sbjct: 60 AAQVRCAMFKNANQRLRWTPESGQQVSIRARVSLYEGRGEYQLIVEHMEMAGDGQLQQQY 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ K L +EGLF + +K +P P+ I +ITSPTGA + DIL + R+P+ + IFPV Sbjct: 120 ERLKATLSDEGLFDESYKKNLPIYPRHIGIITSPTGAAVHDILSVLRRRYPIAPISIFPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQGD EI NAI + N L R D+IIL+RGGGSIEDLW FNDE + R I S Sbjct: 180 SVQGDNAAPEIINAIKKANKL------ERCDVIILSRGGGSIEDLWAFNDETLARTIFAS 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHE D+T+AD+ AD+RAPTP+ +AEM P + L ++RL + Sbjct: 234 NIPVISAVGHEVDFTIADFVADVRAPTPSVSAEMTTPDQHELAQLFDRYQSRLLRSFQQS 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 I+ + + +N L K L + + + + +LD + L + ++ ++ S Sbjct: 294 IQSRTDRINFLNKRLRHPGERIQRQQQQLDHFQQRLVSAIHSQTRQQQNTLQQTKQKLFS 353 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++K + + + + VKQ ++ Sbjct: 354 QHPQGKLEKQKSKLENLSFLLIKSVKQSVKNKRQ-------------------------- 387 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + +LQ+ + L RGY+ + + I + + Sbjct: 388 ---------------------ELIKKASVLQAISPLTVLSRGYSITRQHHGEVIKNTQLV 426 Query: 480 ATKTRILINFFDGQANAIVI 499 + I F G + V Sbjct: 427 SIGDEISTRFSQGSITSTVT 446 >gi|205374082|ref|ZP_03226882.1| exodeoxyribonuclease VII large subunit [Bacillus coahuilensis m4-4] Length = 445 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 148/498 (29%), Positives = 244/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + S+ L+ ++K E + L+ V +RGE+S ++ HSSGH YF+LKD+ +RI +I Sbjct: 2 TEDRYLSIGALTKYIKRKFERDPHLTGVHIRGELSNFKS-HSSGHLYFTLKDDKARISSI 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + ++F PE G++ LV G +T + +YQI ++++ P G G L A E+ K L Sbjct: 61 MFASSAKSLKFNPENGMKVLVTGDVTVYESGGQYQIYVKTMEPDGIGALYLAYEQLKANL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF HK P+P P+++ V+TSPTGA +RDI+ I R+P+ ++++ P VQG + Sbjct: 121 EQEGLFDTAHKKPLPLYPRVVGVVTSPTGAAVRDIITTIKRRYPIAKILVLPALVQGGQA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI Q N++ P+ D+II+ RGGGSIE+LW FN+E + RAI S++P+ISA Sbjct: 181 APSIVKAIAQANSI------PKMDVIIVGRGGGSIEELWAFNEEAVARAIFQSNVPVISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305 +GHETD+T+AD+ AD RAPTPT AAE+AVP E + +++ E RLN + I+ Sbjct: 235 VGHETDFTIADFVADQRAPTPTAAAELAVPHIEEITERVLSRELRLNRAVNERIRQSQTA 294 Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + AL N + RLDRL L ++ +K + R++ Sbjct: 295 LKALTDSYALRNPKRLYEQHMERLDRLTESLGTEQNRMLDKKSEQLKGLARRLEFIHPGK 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + ++ + + Sbjct: 355 AMSNQKEQLDRLTKQQ-------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + I+S + +L + + L+RGY+ + + + + Sbjct: 371 ---NYHMKRMIESSQKELYRHIAMLDALSPLKILERGYSVLFSEEKQVVKSIAQVDRGDK 427 Query: 485 ILINFFDGQANAIVINKA 502 I + DG+ V+ K Sbjct: 428 INVRLADGELYCEVVEKE 445 >gi|162149287|ref|YP_001603748.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter diazotrophicus PAl 5] gi|161787864|emb|CAP57462.1| putative exodeoxyribonuclease VII large subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 526 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 161/499 (32%), Positives = 258/499 (51%), Gaps = 32/499 (6%) Query: 2 NPFSQKNSL---DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 P + + PEYSVSE+S ++ +E V VRGEI+ ++ SGH YFSLK Sbjct: 43 EPLRDSGTAGAGNVPEYSVSEISGAIRRTLEGTFGRVRVRGEITEFKRYP-SGHLYFSLK 101 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D +I +++W+G+++++ PE G+E + GKI+++ S YQ+II+ L +G G LL Sbjct: 102 DEGGKISSVVWRGSVSRLGLKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALLA 161 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 +E+ + KL EGLF K +PF+P +I V+TS GAV+ DI I+ RFP R++++P Sbjct: 162 RIERLRLKLAAEGLFDAAGKRALPFLPDVIGVVTSAQGAVMHDIRTTIARRFPRRLLVWP 221 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG+ +IA AI + + PRPD++I+ARGGGS+EDL FNDE+++RA A Sbjct: 222 VAVQGEAAAAQIAAAIAGFDAIDGRGPIPRPDVLIVARGGGSLEDLMAFNDEVVLRAAAA 281 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 IP+ISA+GHETD TL D+ +D RAPTPT AAE+A P + L + L + ARL + + R Sbjct: 282 CRIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAAPARAELVADLGHRAARLTSGLAR 341 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 L + L+ LP+ L +R RLD L+ L ++ R+ + + Sbjct: 342 LTQTLRLRLDRAAARLPDLPSLLGTARMRLDDRGHRLDMALPALVARRRAALLAVERAMP 401 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 S L+ ++ + + ++ A R + Sbjct: 402 SASLL---------TGPRRARLALAASHLQSGLRQALRDGHARADRTRLRPAP------- 445 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 L+ ++ ++ L+S + L+RGY ++D +T+ + Sbjct: 446 ------------LAAMLRERRAHLAGLAGRLESLSPMAVLERGYVLVRDPAGVPVTRAAD 493 Query: 479 LATKTRILINFFDGQANAI 497 + R+++ F DG+A Sbjct: 494 VRPGGRLVLIFADGEAAVR 512 >gi|86136622|ref|ZP_01055201.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. MED193] gi|85827496|gb|EAQ47692.1| exodeoxyribonuclease VII, large subunit [Roseobacter sp. MED193] Length = 479 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 178/499 (35%), Positives = 270/499 (54%), Gaps = 28/499 (5%) Query: 1 MNPFSQ--KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + + PE+SVSELS +K +E + VRGE+ G SGH Y+ +K Sbjct: 1 MSDLFDDPQPGQNAPEFSVSELSGEVKRTLEGTFGRIRVRGEV-GRVFKARSGHLYYDIK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S + WKG ++ + +PEEG+E +V G++T F SKY + ++ + +G G L+ Sbjct: 60 DDRSVLACTTWKGQISSLSVVPEEGLEVVVTGRLTAFGAQSKYNMNVDEVAVAGQGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRKK+L EGLF+ + K P+P++P+II V+TSP+GAVIRDIL R+ RFP +V+++P Sbjct: 120 LLEKRKKQLELEGLFAPERKKPLPYLPQIIGVVTSPSGAVIRDILHRLRERFPRKVLVWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG C E+A+AI N + G PRPD+II+ARGGG+IEDLW FN+E++ RA A Sbjct: 180 VAVQGANCAPEVAHAIEGFNKMTPGGALPRPDLIIVARGGGAIEDLWGFNEEVVARAAAA 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV+ L + + + ARL + Sbjct: 240 SDIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPVRLELMAWIEDQGARLLRGTGQ 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + LN L +A+P ++ L R RLD+ L L + +++ + + ++ Sbjct: 300 AVQQRRQRLNDLSRAMPRAESLLESPRQRLDQAGYNLPRALMSAVQQRHVNLSRASAGLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + +Q+ R AI + I Sbjct: 360 PAALRNLVQRRRGQFE------------------------TAIAKLSPYPIAREISRQKA 395 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 ++KL R+ ++ + R L+ +YK TL RGY ++ IT + Sbjct: 396 DLEKLTARMVAAQGVRMARQSHQLEAAGRQLEILSYKATLLRGYAVVRSGA-EVITTQAR 454 Query: 479 LATKTRILINFFDGQANAI 497 A + I F DG + Sbjct: 455 AAAAPSLTIEFADGNLDVE 473 >gi|304407044|ref|ZP_07388698.1| exodeoxyribonuclease VII, large subunit [Paenibacillus curdlanolyticus YK9] gi|304344031|gb|EFM09871.1| exodeoxyribonuclease VII, large subunit [Paenibacillus curdlanolyticus YK9] Length = 458 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 160/504 (31%), Positives = 242/504 (48%), Gaps = 64/504 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58 M S YS+ EL+ ++K +E++ L V +RGEIS + HSSGH YF+LK Sbjct: 1 MTAMSNAPR----IYSIKELNRYIKMKLEADQLLGDVWLRGEISNFTH-HSSGHMYFTLK 55 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D SR+ I++ + F+P+EG + + G I+ + YQ + ++ P G G+L Sbjct: 56 DRDSRLKCIMFASHNRSLPFIPKEGTKVIARGNISVYERDGNYQYYVTAMQPDGIGSLYL 115 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 A E+ KKKL EEGLF K +P P+ I VITSPTGA +RD++ + R P + +I+ Sbjct: 116 AYEQLKKKLEEEGLFDHSRKRQLPTFPRAIGVITSPTGAAVRDVIITLQRRHPSVPIIVC 175 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 PV VQG + I AI +N + E D++I+ RGGGS+E+LW FN+E + RAIA Sbjct: 176 PVLVQGTGAAQSIVQAIQFMNRMAET------DVLIVGRGGGSLEELWAFNEEAVARAIA 229 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 +S+IP+ISA+GHETD+T+AD+ ADLRA TPT AAE+AVP E L+ L L+ RL Sbjct: 230 SSTIPVISAVGHETDFTIADFVADLRAATPTAAAELAVPHIEELKRELDRLKHRLLQSAQ 289 Query: 298 RLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 ++ + L + + + + L RLDRL L + + R + Sbjct: 290 LAVRTRRERLERVKRSPFFVHPRRYLLDQAQRLDRLEERLALLTQRRVERGRNRLMRLSQ 349 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 + ++ + Q EKQQ + + Sbjct: 350 SLFANHPGQAV----QLAAEKQQALRTRM------------------------------- 374 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFIT 474 E L+ ++K +S T R L + + + RGY+ + D I Sbjct: 375 ------------ETALASQLKQHKIRLSGTIRQLDALSPLKVMSRGYSLVYDEQEQKLIR 422 Query: 475 QKRNLATKTRILINFFDGQANAIV 498 + + I DGQ + V Sbjct: 423 SVNEVQPGDLVRIKLKDGQLDCHV 446 >gi|315633789|ref|ZP_07889079.1| exodeoxyribonuclease 7 large subunit [Aggregatibacter segnis ATCC 33393] gi|315477831|gb|EFU68573.1| exodeoxyribonuclease 7 large subunit [Aggregatibacter segnis ATCC 33393] Length = 444 Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats. Identities = 142/498 (28%), Positives = 229/498 (45%), Gaps = 57/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ ++ ++E+ L V + GEIS + SGH Y SLKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNQSVRLMLENQLGQVWLTGEISNFT-QPVSGHWYLSLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P G++ LV ++ + YQ+IIES+ +G G L+ E K KL Sbjct: 60 RMKNLRVGFRPTNGMQVLVRASVSLYEPRGDYQLIIESMHLAGDGLLMQQFEALKVKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ HK +P K + +ITS TGA ++DIL + R P L+VII+P VQG + Sbjct: 120 EGLFAQNHKKNLPHFSKAVGIITSQTGAALQDILHILQRRDPSLKVIIYPTAVQGKDAAT 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI +S+IPIISA+G Sbjct: 180 EITQMIQLANQRQE------VDVLIVGRGGGSLEDLWCFNEEKVARAIFHSAIPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ + L L + R+ + R+ K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRNQAELIQQLQYRQQRIEIALDRIFAEKKQQLQ 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + + +L L+ +L + + + R+ + L I Sbjct: 294 HLSLRLQHRHPQSQLRIQQQLITQLRHRLQQSLYHRWQKTAENLTALSARLYKNPLPLRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q++ Q + + + Sbjct: 354 QQHEQRVAQLKVR----------------------------------------------- 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ K+ ++ L S + L RGY+ Q+ I + +I Sbjct: 367 LNSEMNLKLGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNAKYGTIKSINEVKIGEQIR 426 Query: 487 INFFDGQANAIVINKAPP 504 DG+ + + Sbjct: 427 TRLTDGEIISQISQIEKK 444 >gi|332305589|ref|YP_004433440.1| exodeoxyribonuclease VII, large subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172918|gb|AEE22172.1| exodeoxyribonuclease VII, large subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 444 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 140/499 (28%), Positives = 235/499 (47%), Gaps = 58/499 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + ++VS+L++ + ++ES + V + EIS + SSGH YF+LKDN ++ Sbjct: 1 MFSASPANRNIFTVSKLNHLARSVLESEIGQVWLSAEISNFVA-ASSGHWYFTLKDNRAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I + ++KG K+ P+EG + LV ++ + YQ+I+E L P G G L E Sbjct: 60 IKSAMFKGANRKVMTRPKEGDKVLVRANLSIYEPRGDYQLIVEHLEPEGEGQLKRQFEAL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K+ L +GLF+ Q+K +P I V+TS TGA + DIL + R P + V+I+P +VQ Sbjct: 120 KQALSAQGLFASQNKQSLPSHISRIGVVTSATGAALHDILTVLKRRNPAVEVVIYPTQVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G ++I AI N KE D++I+ RGGGS+EDLW FN+E + AI NS +P Sbjct: 180 GVSASRQICRAIEIANQRKE------VDVLIVGRGGGSLEDLWCFNEENVAWAIHNSVLP 233 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D T+AD+ ADLRAPTP+ AAE+ + + ++L+ RL LIK Sbjct: 234 IVSAVGHEVDVTIADFVADLRAPTPSAAAELVSQSQVEMLNTLLAKRDRLYKNARTLIKE 293 Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 SL + L + L R+D + HN+ + R + ++ +++ Sbjct: 294 LQYQQQSLSQELHAYHPKNQLRQHMQRVDNQLTAITHNMSTRLMRAKQSSINLSSKLSQF 353 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 +++ +Q Q + Q + Sbjct: 354 SPKALLKEKQQTHSMLSQRLTQAWQ----------------------------------- 378 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ +++ + +L + + +TL RGY+ ++ + ++ L Sbjct: 379 ------------RGLEQRQLTLANASHLLDTVSPLSTLARGYSITF-KDDKVVKSQKALT 425 Query: 481 TKTRILINFFDGQANAIVI 499 I F DG+ + V Sbjct: 426 EGDVITNRFADGEVKSTVK 444 >gi|300722902|ref|YP_003712198.1| exonuclease VII large subunit [Xenorhabdus nematophila ATCC 19061] gi|297629415|emb|CBJ90016.1| exonuclease VII, large subunit [Xenorhabdus nematophila ATCC 19061] Length = 453 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 142/503 (28%), Positives = 231/503 (45%), Gaps = 53/503 (10%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + +SVS L+ ++ ++E + + + E+S + SSGH YF+LKD ++I A Sbjct: 2 SRPANTGIFSVSRLNQTVRQLLEMEMGRIWISAEMSNF-SQPSSGHWYFTLKDERAQIRA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ + F P+ G + LV +IT + YQ+++ES+ P+G G L E K+K Sbjct: 61 AMFRSQNLRATFRPQNGQQVLVRAQITLYEPRGDYQLLVESIQPAGDGLLQQQFEILKQK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K I VITS +GA + DIL + R P L +II+P VQG E Sbjct: 121 LAAEGLFDQIHKKPLPSPAKRIGVITSASGAALHDILNILKRRDPALPIIIYPTAVQGAE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S IPI+S Sbjct: 181 APLQIIRAIELANVRQE------CDVLIVGRGGGSLEDLWCFNDEQVARAIFQSHIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D T+ D+ ADLRAPTP+ AAE+ + L + +L+ RL + K Sbjct: 235 AVGHEIDVTITDFVADLRAPTPSAAAELVSRNQIELLRQIQSLQQRLEMAMDYFFAQKQR 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L L L +R + H + ++ FL Sbjct: 295 VFNGLQHRLQQQHPDLRLARQQ--------------------NHLAELRQKLIDSFLR-- 332 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +QH K + R + + + +I +Q R+ Sbjct: 333 ---------CLKQHAISYEKWNQRLLHIHPEREIQYYSQSIQQLDFRL------------ 371 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + ++ +++ +++ + TL RGY+ + ++ + Q + + + Sbjct: 372 --KQAVERQLGRYREKFAVSCSRMEAVSPLATLSRGYSISEASDGKLLKQVKQVKVGDTL 429 Query: 486 LINFFDGQANAIVINKAPPKEQP 508 DG + V +++ Sbjct: 430 KTRLQDGLVESQVTQVKKIRKKK 452 >gi|56551196|ref|YP_162035.1| exodeoxyribonuclease VII large subunit [Zymomonas mobilis subsp. mobilis ZM4] gi|59802896|sp|Q9FDL4|EX7L_ZYMMO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|56542770|gb|AAV88924.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 544 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 183/546 (33%), Positives = 296/546 (54%), Gaps = 38/546 (6%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + +SVSE+S LK VE SH+ VRGEISG+ SGH Y +LKD+ + Sbjct: 13 AKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSGHCYLALKDDKAV 71 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 +D++IW+G +++I F PE G+E + G++TT+ G S+YQ++IE L +G G L+ L++R Sbjct: 72 LDSVIWRGVVSRISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRR 131 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 ++ L EEGLF+ K +PF+PKII V++SP+GAVIRDIL R++ R P VI++PV VQG Sbjct: 132 RRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQG 191 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D+ ++A A+ + LK G PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+ Sbjct: 192 DQAAAKVAAAVRGFSALKAGDAIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPV 251 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL DYAADLRAPTPT AAE+AVPV+ L + L NL R+NN I R K Sbjct: 252 ISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLS 311 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L ++ + LP+ ++ L+ D +LE ++ + N ++ L Sbjct: 312 EERLEAVRRRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLQ 371 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + + + + R + E+++ + L++ + R+ + K L Sbjct: 372 ARIAREQARLSACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFL 425 Query: 424 ITRIE----------------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 +++ +++ ++ ++ R+ + L +G Sbjct: 426 AEKLQPLLLEQRWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKG 485 Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521 Y ++D++++ ++ + T R+ + F DG T + + Sbjct: 486 YARVEDSHSHVVSNAHDAKTHKRLNLIFHDGSVWV---------APETPPKSRKADNPPE 536 Query: 522 QGTQGE 527 Q Sbjct: 537 PPEQTS 542 >gi|170725913|ref|YP_001759939.1| exodeoxyribonuclease VII large subunit [Shewanella woodyi ATCC 51908] gi|226697608|sp|B1KLB9|EX7L_SHEWM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|169811260|gb|ACA85844.1| exodeoxyribonuclease VII, large subunit [Shewanella woodyi ATCC 51908] Length = 442 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 221/490 (45%), Gaps = 57/490 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS+L+ ++ ++E L V + EIS + SSGH Y +LKD+ ++I ++KG Sbjct: 6 NNVYTVSQLNGEVRQLLEGELGRVWLNAEISNFSS-PSSGHWYLTLKDHFAQIRCAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ+IIES++P+G G L E K KL EG Sbjct: 65 KNRTVTFRPANGQQVLVKGSISVYEPRGDYQLIIESMLPAGDGMLAQQYEALKMKLAAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K P+P I VITS TGA ++D+L ++ R P + V+++P +VQGD K I Sbjct: 125 LFATDTKRPLPTNINKIGVITSATGAALKDVLHVLARRDPSIEVVVYPTQVQGDNAAKLI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N +E D+++L RGGGS+EDLW FN E + I NS++P++SA+GHE Sbjct: 185 CRAIELANARQE------VDVLLLTRGGGSLEDLWCFNSEDLAHCIYNSALPVVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D +++DY AD+RAPTP+ AE+ + LI +RL + +L Sbjct: 239 VDTSISDYVADVRAPTPSAGAELLSKDADDKAHKLIAGLSRLKQSWQHYQLKTVQKATAL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + L D + L L I + ++ +R+ H + Sbjct: 299 ENRLQRQDPKRRLEQFEQSFDEMQLRLNAALNSRIHKLALKQQNLSHRLSQQSPEHRLTL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + +K L + L Sbjct: 359 EAKRLDYLTTRLNEGIKDKLHDVEL----------------------------------- 383 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 S+ + LQ+ + TL RGY+ QD + + ++ T + Sbjct: 384 ------------SLKNSAHQLQTVSPLATLSRGYSITQDESGKVLLNAKDAKTGDLLTTR 431 Query: 489 FFDGQANAIV 498 +G+ + V Sbjct: 432 LLEGELRSKV 441 >gi|92112850|ref|YP_572778.1| exodeoxyribonuclease VII large subunit [Chromohalobacter salexigens DSM 3043] gi|91795940|gb|ABE58079.1| Exodeoxyribonuclease VII large subunit [Chromohalobacter salexigens DSM 3043] Length = 448 Score = 363 bits (932), Expect = 4e-98, Method: Composition-based stats. Identities = 138/486 (28%), Positives = 223/486 (45%), Gaps = 52/486 (10%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ + ++E V GE+SG +SGH YF+LKD+ +++ ++ Sbjct: 9 LSVSELNRQARLMLERGFGDCWVEGEVSGV-ARPASGHIYFTLKDDRAQLRCAFFRNRAR 67 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + ++G V G+++ F YQ+I+E++ SG G LL A E+ K KL EG+F+ Sbjct: 68 LMRTPLKDGDRLRVRGRVSVFEPRGDYQLIVEAVQASGEGELLAAFERLKAKLSAEGVFA 127 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + +P P+ +A+ITSPTGA IRD+L + R+P L V I PV VQG E P I A Sbjct: 128 NARP--LPCPPRHLAIITSPTGAAIRDVLAVLRHRWPSLEVTILPVPVQGREAPPAIIRA 185 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I Q N D +++ RGGGS+EDLW FNDE + RAI +S +P++SA+GHE D Sbjct: 186 IAQANQR-AQSPDDTVDALLVTRGGGSLEDLWAFNDEHLARAIHHSRLPVMSAVGHEVDV 244 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TLAD+AAD RAPTP+ AAE VP ++ L E L + ++ L+ Sbjct: 245 TLADFAADERAPTPSAAAERLVPDWREWRAQLQAAERGLTRAMQARLERDGQRLDHARAR 304 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + L+ R RL+ L+ ++ + R+ +H + R++ I+ RQ + Sbjct: 305 LRHPGERLAEQRRRLESWETRLQLAMQRRLDRERQHHETLTRRVERQDPRLAIETYRQRL 364 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ + + Sbjct: 365 TTLERQLHTALP-----------------------------------------------R 377 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 ++ + R L + + L RGY ++D + + + + + +G+ Sbjct: 378 RLDQSRERLEALARELNAVSPLAVLGRGYAILEDDDRHIVRHAHDTQPGQTLTARLGEGR 437 Query: 494 ANAIVI 499 V Sbjct: 438 LKVEVK 443 >gi|148263947|ref|YP_001230653.1| exodeoxyribonuclease VII large subunit [Geobacter uraniireducens Rf4] gi|189037846|sp|A5GF75|EX7L_GEOUR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|146397447|gb|ABQ26080.1| Exodeoxyribonuclease VII large subunit [Geobacter uraniireducens Rf4] Length = 446 Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats. Identities = 153/504 (30%), Positives = 258/504 (51%), Gaps = 61/504 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F++K +VS+L+ ++ ++E N V V GEIS + SGH YF+LKD Sbjct: 1 MELFAEKR-----ILTVSQLNGLIRGVLEENFEQVWVEGEISNL-AMPHSGHLYFTLKDA 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++++ + ++F P++G+ +V G+++ F +YQ+I+E L P G G L A Sbjct: 55 GAQVRCVMFRASSRALKFKPKDGMGLIVRGRVSVFEPRGEYQLIVEYLEPQGIGALQLAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 + K++L +EGLF++ HK PIP +P+ I V+TS TGA I DIL ++ RF ++V+I PV Sbjct: 115 IQLKERLAKEGLFAETHKKPIPKLPQRIGVVTSATGAAIHDILNVLNRRFANVQVLIRPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG+ EIA AI N +E D++I+ RGGGS+EDLW FN+E++ RAI S Sbjct: 175 KVQGEGAAGEIAAAIRDFNRYRE------IDVMIVGRGGGSLEDLWAFNEEVVARAIYES 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHE D+T+AD+ ADLRAPTP+ AAE+ V K L S L L RL + Sbjct: 229 KIPVISAVGHEIDFTIADFVADLRAPTPSAAAELVVKSKAELASDLDALSHRLVLAMRHC 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ +N L +AL + L R+D L ++H +++++ R+ + NR++ Sbjct: 289 LEDCWGDVNGLTRALKDPSLLLGHLAQRVDDLDERIKHAVQVMLLRRKEKAAFLQNRLRL 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +++ ++ +L +E Sbjct: 349 QNPALQVEQGKELLLGYCARMEN------------------------------------- 371 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478 + ++ + +++ L + + TL RGY+ ++ + + I+ Sbjct: 372 ----------TMERLLERARQAAAVSAGKLHALSPLATLARGYSIVRKLPDMSVISDSSQ 421 Query: 479 LATKTRILINFFDGQANAIVINKA 502 + + + F G A+ V K Sbjct: 422 VEPGDLLDLTFQQGGAHCRVETKH 445 >gi|117620910|ref|YP_856514.1| exodeoxyribonuclease VII, large subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562317|gb|ABK39265.1| exodeoxyribonuclease VII, large subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 454 Score = 363 bits (931), Expect = 5e-98, Method: Composition-based stats. Identities = 138/503 (27%), Positives = 237/503 (47%), Gaps = 57/503 (11%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 S ++V+ L+ ++ I+E +L V + GE+S + SSGH YFSLKD +++ Sbjct: 6 EPSQSRQQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNL-AMPSSGHWYFSLKDMSAQV 64 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 ++KG ++ F P++G++ LV +++ + YQ+IIES+ P+G G L E+ K Sbjct: 65 RCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRFEELK 124 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 ++L EGLF + K P+P P+ + +ITS TGA + D+L + R P L V I+P +VQG Sbjct: 125 RRLGAEGLFDEGRKRPLPREPRAVGLITSATGAALHDMLTVLRRRAPDLPVFIYPTQVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +I +AI N E D++I+ RGGGS+EDLW FN+E + RAIA+S+IP+ Sbjct: 185 SAAIGQIVSAIALANRRAE------VDVLIVGRGGGSLEDLWCFNEEAVARAIAHSAIPV 238 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +SA+GHE D T++D+AADLRAPTP+ AAE+ P + L +L+ +L + R Sbjct: 239 VSAVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLKQQLLQAMNRQQTAA 298 Query: 304 INTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L K L + + L RLD L L+ + + + R ++ R++ Sbjct: 299 RHDFILLQKRLDHQDPKRRLEQQSQRLDELSARLQQLMNHKLHQGERRLANLELRLQGKS 358 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + ++ ++ + ++ + Sbjct: 359 PERLLAAGKRRHQLAEERLHALIAKRRDLAD----------------------------- 389 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +++ + L + TL RGY+ + + I++ + Sbjct: 390 ------------------HRLAMLSARLDGVSPLATLGRGYSITRTQSGEVISRATQVDA 431 Query: 482 KTRILINFFDGQANAIVINKAPP 504 ++ +GQ V P Sbjct: 432 GQTLVTQLAEGQLWVRVEEVHQP 454 >gi|310815255|ref|YP_003963219.1| exodeoxyribonuclease VII, large subunit [Ketogulonicigenium vulgare Y25] gi|308753990|gb|ADO41919.1| exodeoxyribonuclease VII, large subunit [Ketogulonicigenium vulgare Y25] Length = 447 Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats. Identities = 193/498 (38%), Positives = 269/498 (54%), Gaps = 52/498 (10%) Query: 1 MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M F K + PE+SVSELS +K +VE +HV VRGE+ G SSGH Y LKD Sbjct: 1 MELFEDEKPKDNAPEFSVSELSGAVKRMVEGEFAHVRVRGEL-GRISRPSSGHIYLDLKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + S + A++WKG ++ PEEG+E + G++TTFPG SKYQ+IIE + P+G+G L+ Sbjct: 60 DRSVLAAVVWKGQAARLSARPEEGLEVIATGRLTTFPGQSKYQMIIEDIAPAGAGALMAR 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 LEK K +L EEGLF K PIPF+P++I VITSP+GAVIRDIL R+ RFP +VI++PV Sbjct: 120 LEKLKAQLGEEGLFDPARKKPIPFLPEVIGVITSPSGAVIRDILHRLRDRFPRKVIVWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E+A AI N L G PRPD++I+ARGGGS+EDLW FN+E++VRA A S Sbjct: 180 AVQGQAAAGEVARAIAGFNALTPGGAMPRPDLLIVARGGGSVEDLWAFNEEVVVRAAAAS 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TL DYAAD RAPTPT AAEMAVPV+ L + + +LEAR + + ++ Sbjct: 240 DIPLISAVGHETDTTLIDYAADRRAPTPTAAAEMAVPVRMDLFAQMQSLEARQSRAMQQV 299 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L+ L +ALP +D L+ RLD + L+ L+ I + + Sbjct: 300 LTRRGQRLSDLSRALPRADALLAGQAQRLDFAAQRLDAALQTGIDARALRLARNA--LTP 357 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L I + + I ++ +R Sbjct: 358 SVLRTRINNDLRTIDVLATRASAATERLMR------------------------------ 387 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 +V R+ ++ Y TLKRG+ ++ + + T L Sbjct: 388 -----------------QKEQAVENIDRLRETLGYAATLKRGFAVVR-ADGHVATSTAAL 429 Query: 480 ATKTRILINFFDGQANAI 497 T + + DG+ Sbjct: 430 EAATSVEVELTDGRVRIR 447 >gi|58040160|ref|YP_192124.1| exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H] gi|58002574|gb|AAW61468.1| Exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H] Length = 517 Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats. Identities = 165/520 (31%), Positives = 269/520 (51%), Gaps = 21/520 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + P+YSVSE+S +K +ES V VRGE++ + SGH Y SLKD Sbjct: 2 MESDGASIRGNVPQYSVSEISGAIKRTLESGFGRVRVRGEVTELKRYP-SGHVYLSLKDE 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +I +IW+G+++++ PE G E + G+++ + S YQ++I+ + +G G LL + Sbjct: 61 GGKIAGVIWRGSVSRLGMAPENGNEVIATGRVSAYGERSSYQLVIDRMEFAGEGALLANI 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+ ++KLLEEGLF + K IPF+P ++ VITS +GAV+ DI+ IS RFP V+++PV Sbjct: 121 ERLRRKLLEEGLFEPERKKAIPFLPSLVGVITSRSGAVLHDIITTISRRFPRDVLLWPVP 180 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +IA AI ++ + PD++I+ARGGGS+EDL FNDE ++RA+AN Sbjct: 181 VQGEGAAAQIAAAIEGMSVRRPR----TPDVLIVARGGGSLEDLMAFNDERVLRAVANCP 236 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +PIISA+GHETD TL D +D RAPTPT AAEMAVP++ + + + + ARL + R+I Sbjct: 237 VPIISAVGHETDTTLIDLVSDRRAPTPTAAAEMAVPLRSEMVADMAHRNARLTGALTRII 296 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ LP+ L +R RLD + L+ L + R + + S Sbjct: 297 QTARAQLDQAAARLPDLPGLLDSARMRLDDRGQRLDLALPSFVMRVRNRLDAPGMHLPSP 356 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L+ I ++R + + +++ R + +L E+ + + + + Sbjct: 357 ELL--IGRSRARLQALRLPAPELLVSRARARLTAPTTHLPSPELLIERRRAGLRLVSGEL 414 Query: 421 KKLITRIEFILSHKIKSCH--------------TSVSITTRILQSFAYKNTLKRGYTSIQ 466 R + + + L++ + + L RGY +Q Sbjct: 415 DTAWQRSLQTFQLRTERQRLSPDILRSAIRLQQARLQGLGSHLEAVSPRAILSRGYVLVQ 474 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 D N +T R++++F DG A + + +P + Sbjct: 475 DVNGQPVTSAEARPVADRVVLSFADGDRGARLDSLSPQGD 514 >gi|15803033|ref|NP_289063.1| exodeoxyribonuclease VII large subunit [Escherichia coli O157:H7 EDL933] gi|12516901|gb|AAG57620.1|AE005480_7 exonuclease VII, large subunit [Escherichia coli O157:H7 str. EDL933] Length = 456 Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats. Identities = 144/506 (28%), Positives = 232/506 (45%), Gaps = 57/506 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 PSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + Y II+ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYXPRGDYXIIVESMQPAGEGLLQXKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF Q+K P+P + VITS TGA + DIL + R P L VII+P VQGD+ Sbjct: 122 QAEGLFDLQYKKPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P +I AI N C D++I+ RGGGS+EDLW FNDE + RAI S IP++SA Sbjct: 182 PGQIVRAIELANQ------CNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSA 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + RL + + + Sbjct: 236 VGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRR 295 Query: 307 LNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L +R + +RL + + LE + R + + R+ Sbjct: 296 FTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQP 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + + I + + + + Sbjct: 356 KIHRAQTRIQQLEYRLAE------------------------------------------ 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L ++ + L++ + +TL RGY+ T+ + + + + Sbjct: 374 -----TLRAQLSATRERFGNAVTHLEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEM 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 + DG + V N P K+ K Sbjct: 429 LTTRLEDGWVESEVKNIQPVKKSRKK 454 >gi|241760867|ref|ZP_04758956.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374486|gb|EER63947.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 544 Score = 362 bits (929), Expect = 8e-98, Method: Composition-based stats. Identities = 183/546 (33%), Positives = 297/546 (54%), Gaps = 38/546 (6%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + +SVSE+S LK VE SH+ VRGEISG+ SGH Y +LKD+ + Sbjct: 13 AKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSGHCYLALKDDKAV 71 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 +D++IW+G +++I F PE G+E + G++TT+ G S+YQ++IE L +G G L+ L++R Sbjct: 72 LDSVIWRGVVSRISFWPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRR 131 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 ++ L EEGLF+ K +PF+PKII V++SP+GAVIRDIL R++ R P VI++PV VQG Sbjct: 132 RRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQG 191 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D+ ++A A+ + LK G PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+ Sbjct: 192 DQAAAKVAAAVRGFSALKAGDAIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPV 251 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL DYAADLRAPTPT AAE+AVPV+ L + L NL R+NN I R K Sbjct: 252 ISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLS 311 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+++ + LP+ ++ L+ D +LE ++ + N ++ L Sbjct: 312 EERLDAVRQRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLK 371 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + + + + R + E+++ + L++ + R+ + K L Sbjct: 372 ARIAREQARLSACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFL 425 Query: 424 ITRIE----------------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 +++ +++ ++ ++ R+ + L +G Sbjct: 426 AEKLQPLLLEQRWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKG 485 Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521 Y ++D++++ ++ + T R+ + F DG T + + Sbjct: 486 YARVEDSHSHVVSNAHDAKTHKRLNLIFHDGSVWV---------APETPPKSRKADNPPE 536 Query: 522 QGTQGE 527 Q Sbjct: 537 PPEQTS 542 >gi|161870233|ref|YP_001599403.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis 053442] gi|161595786|gb|ABX73446.1| exonuclease VII large subunit [Neisseria meningitidis 053442] Length = 469 Score = 362 bits (929), Expect = 8e-98, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 MRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ ++ R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPPRPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPTPVQGTGSELQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI SIP++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACSIPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + L I+ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGHLKTILEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F +K ++ K+ Sbjct: 320 QIRHPRQKLDDQRTYIHKLVQTLSYSMTQNLRAHTARFERQTQTLKHCRPDVSVYKH--- 376 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I T + ++ Sbjct: 377 ---------------------------------------NIDRFQTALSHAFHQL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|157961140|ref|YP_001501174.1| exodeoxyribonuclease VII large subunit [Shewanella pealeana ATCC 700345] gi|189037839|sp|A8H252|EX7L_SHEPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157846140|gb|ABV86639.1| exodeoxyribonuclease VII, large subunit [Shewanella pealeana ATCC 700345] Length = 445 Score = 362 bits (929), Expect = 8e-98, Method: Composition-based stats. Identities = 135/492 (27%), Positives = 220/492 (44%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ ++E L + + EIS + SGH Y +LKDN S+I ++KG Sbjct: 8 VYTVSRLNGEVRQLLEGQLGRIWLNAEISNF-AAPGSGHWYLTLKDNFSQIRCAMFKGRN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P G + LV G I+ + YQ++IES++P+G G L E K KL EGLF Sbjct: 67 QAVTFRPANGQQVLVKGNISVYEPRGDYQLLIESMLPAGDGLLAQQYEALKMKLAAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 + K P+P + I V+TSPTGA IRDIL ++ R + VII+P VQG + K I + Sbjct: 127 ASDTKRPLPANIQKIGVVTSPTGAAIRDILHVLARRDSSIEVIIYPTPVQGSDAAKSICD 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N+ E D++++ RGGGS+EDLW FNDE + I NS IP++SA+GHE D Sbjct: 187 AINLANSRAE------VDVLLVTRGGGSLEDLWSFNDEGLAHTIYNSGIPVVSAVGHEVD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T++DY ADLRAPTP+ AE+ ++ L++ +RL K + + ++ Sbjct: 241 MTISDYVADLRAPTPSAGAELLSKDADNKAQKLLSQLSRLKQAWQHYQLKKQSQVQTIEH 300 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + + L D + L+ ++ + ++ +R+ + H + Sbjct: 301 RLQKQDPQRRLQMYEQSFDEMQLRLQQAMQTKLHAYALKQQNLSSRLANQSPQHRLTLEA 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + + +K R+ Sbjct: 361 QRLSYLSAKLNDAM--------------------------------DDKLKMSEQRL--- 385 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + L + + TL RGY+ + + + + Sbjct: 386 ------------AHRAQQLDTVSPLATLSRGYSITLTGSGKVVQAPSDTCVGDTLTTRLR 433 Query: 491 DGQANAIVINKA 502 DG + V+ + Sbjct: 434 DGSVTSTVVEVS 445 >gi|148556052|ref|YP_001263634.1| exodeoxyribonuclease VII large subunit [Sphingomonas wittichii RW1] gi|148501242|gb|ABQ69496.1| Exodeoxyribonuclease VII large subunit [Sphingomonas wittichii RW1] Length = 492 Score = 362 bits (929), Expect = 9e-98, Method: Composition-based stats. Identities = 185/531 (34%), Positives = 263/531 (49%), Gaps = 61/531 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 ++ + P SVSELS LK VE HV VRGEISG++ HSSGH Y +LKD+ + Sbjct: 18 AEEQPGDNAPALSVSELSGALKRQVEEAFGHVRVRGEISGFK-RHSSGHCYLTLKDDRAA 76 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID +IWKG + F PE+GIE + G++TT+PG SKYQI+IE + +G G L+ L++R Sbjct: 77 IDGVIWKGQAAAMRFRPEDGIEVIATGRLTTYPGRSKYQIVIERMELAGQGALMALLDQR 136 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 ++ L EGLF + K P+PF+P+II V+TSPTGAVIRDIL R+ R P V+++PV VQG Sbjct: 137 RRMLAAEGLFDEDRKRPLPFMPRIIGVVTSPTGAVIRDILHRLEDRCPTHVVLWPVAVQG 196 Query: 184 DECPKEIANAILQLNTLKEGRTCPR----PDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 + ++A A+ + G + PR PD++I+ RGGGSIEDLW FN+E +VRAIA S Sbjct: 197 EGAAAQVARAVRGFGAMAPGGSAPRPDLLPDLLIVGRGGGSIEDLWAFNEEEVVRAIAES 256 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD TLAD+AAD RAPTPT AAEMAVPV+ L + L AR + R Sbjct: 257 PIPVISAVGHETDTTLADFAADRRAPTPTAAAEMAVPVRADLAHHVRELGARAERLARRY 316 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + ++ + P D + + RLD + L L I H ++ Sbjct: 317 RERAGERFEAVAERFPALDSLFAGQQQRLDDVADRLPRALGQRIAVARGDLAHAAGALRP 376 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L + + R + Sbjct: 377 SLLDRKLDRARDRLEAV------------------------------------------- 393 Query: 420 IKKLITRI-EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 R+ + + +I ++ RI + L+RGY ++ +T+ Sbjct: 394 ------RLTDRPIRARIADGEIALERLWRIAEQLHPDKPLQRGYVRVEKRGGGVLTEAAA 447 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + ++F DG +A V N + E Q LF Sbjct: 448 ARAAGLLTLHFADGAVDARVENGG------KAPPAKPRSDGEDAPRQQNLF 492 >gi|87119588|ref|ZP_01075485.1| Exonuclease VII, large subunit [Marinomonas sp. MED121] gi|86165064|gb|EAQ66332.1| Exonuclease VII, large subunit [Marinomonas sp. MED121] Length = 450 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 135/505 (26%), Positives = 236/505 (46%), Gaps = 57/505 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN F+ + + +SVS+L+ ++ ++E++L V V GEIS SGH YFSLKD+ Sbjct: 1 MNFFTAEKQ-NEVAFSVSQLNRQIQSLLEASLPWVLVEGEISNL-ARPGSGHWYFSLKDS 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I ++K N + F P++G + K+T + Q+ +ES+ G G L A Sbjct: 59 KAQIRCAMFKNRNNSVGFKPKDGDLVKLRAKVTFYGPRGDCQLTVESMESGGEGALQQAY 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ K +L EGLF +HK P+P P+ +A+ITSP GA +RD++ RFPL + I P Sbjct: 119 ERLKAQLEAEGLFKQEHKKPLPVTPERVAIITSPIGAAVRDMISAFKRRFPLTELTIIPS 178 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + + +++++ D II+ RGGGS+EDL+ FNDE + R I N+ Sbjct: 179 LVQGQGAAQNLTKQLIRMDASDH------FDAIIIGRGGGSLEDLYSFNDETLARTIFNA 232 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PIISA+GHE D+T+AD+ AD+RA TPT AAE+ P + L + + E L R Sbjct: 233 KTPIISAVGHEVDFTIADFVADVRAATPTAAAELLSPDSDQLIRQIQSRENSLTLSFERQ 292 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ + L+ L++ + + + + + +L +L + ++ +++ ++ + H R+ + Sbjct: 293 LQTQQQKLDHLVQRMRHPSERIQLQQDKLTQLEKRMQQSMQALLNKHKVKLTHSDTRLSN 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ Q + + Q+ + Q +K Sbjct: 353 ASPAQTLKLKNQQLEDYQRRLSQALK---------------------------------- 378 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + + L + L RGY + I Sbjct: 379 -------------QNLEQKTQTFASLVEKLNLVSPLQILSRGYAIASNEEG-VIKNISQT 424 Query: 480 ATKTRILINFFDGQANAIVINKAPP 504 ++ + +G+ N VI+K Sbjct: 425 KKGEKLKVRVENGELNCEVISKKKS 449 >gi|332141957|ref|YP_004427695.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327551979|gb|AEA98697.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 454 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 130/502 (25%), Positives = 226/502 (45%), Gaps = 58/502 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F+ S +V++L+ + +E + + + EIS + +SGH YF+LKDN ++ Sbjct: 6 FTNSPSTSRQILTVTKLNRLARTALEGEIGLIWLSAEISNFVA-AASGHWYFTLKDNKAQ 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + A ++KG + P+EG + LV + + YQ+++E + G G L A E Sbjct: 65 VRAAMFKGANRNVRLRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K KL EGLF +K P+P I VITS +GA + D+L + R P VI++P VQ Sbjct: 125 KFKLNNEGLFDATNKRPLPERINRIGVITSSSGAALHDVLSVLKRRSPQTEVIVYPSMVQ 184 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ P ++ NA+ + N E D+++L RGGGS+EDLW FNDE + R IA S++P Sbjct: 185 GEAAPLQLINALRKANQRSE------VDVLLLTRGGGSLEDLWCFNDESLAREIAASTLP 238 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D+T++D+ AD+R+PTP+ AAE+ L ++ + RL + I+ Sbjct: 239 IVSAVGHEVDFTISDFVADVRSPTPSAAAEILSQDSTALYQTINQQKQRLARAMNHCIQA 298 Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L + L + + LDRL L H ++ + + + + R+ Sbjct: 299 NKQQLTLKKQRLDALHPQSRIQSQWQTLDRLQLRLVHAMQRDMSTAEKRVHALNYRLNQQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + + + Sbjct: 359 SPAARVARAK-----------------------------------------------DKL 371 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + ++ ++ +K+ + + + +LQS + +TL RGY+ ++ + + Sbjct: 372 SYVNAKLIATMTALLKNKKSELGGSVTLLQSVSPLSTLARGYSITLT-DSTTVNNVSKVN 430 Query: 481 TKTRILINFFDGQANAIVINKA 502 I DG+ + V N Sbjct: 431 VGDEIKTRVTDGEITSTVTNIQ 452 >gi|113969577|ref|YP_733370.1| exodeoxyribonuclease VII large subunit [Shewanella sp. MR-4] gi|123130600|sp|Q0HKV4|EX7L_SHESM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|113884261|gb|ABI38313.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. MR-4] Length = 448 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 142/497 (28%), Positives = 220/497 (44%), Gaps = 57/497 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ I+E L V + GEIS + SSGH Y +LKD++S+I ++KG Sbjct: 6 NNIYTVSRLNGEVRQILEGQLGKVWLNGEISNFSA-PSSGHWYLTLKDHYSQIRCAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ++IES++P+G G L E K KL +G Sbjct: 65 RNQSVSFKPVNGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAAQG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K +P + I VITSP+GA IRD+L ++ R P + VII+P +VQG+ I Sbjct: 125 LFAADTKRQLPKNIQRIGVITSPSGAAIRDVLHVLARRDPSIEVIIYPTQVQGESADLNI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+GHE Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T++DY AD+RAPTP+ AE+ ++ L + +RL + L+ L Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLSRLKQSASHYQLKQERRLSLL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L +TL R D + LE L + R + +R++ H + Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALSNKLHGLSRRQQQLASRLEQQSPKHKLAL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++ ++ Sbjct: 359 ETNRLSYLATRLQDAMQD------------------------------------------ 376 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + V L++ + TL RGY+ D N+ I L+ +I Sbjct: 377 -----TLNQSEQRVKYAAHQLETVSPLATLSRGYSITTDANHQVIDNAAQLSVGDKINTR 431 Query: 489 FFDGQANAIVINKAPPK 505 GQ + V Sbjct: 432 LRHGQVQSTVTQITDES 448 >gi|237653876|ref|YP_002890190.1| exodeoxyribonuclease VII large subunit [Thauera sp. MZ1T] gi|237625123|gb|ACR01813.1| exodeoxyribonuclease VII, large subunit [Thauera sp. MZ1T] Length = 457 Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats. Identities = 135/499 (27%), Positives = 215/499 (43%), Gaps = 54/499 (10%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + SVSEL+ + ++ES L + V GEIS +SGH YF+LKD + Sbjct: 8 PANGAATPAAQVLSVSELNRMARELLESALPLMWVGGEISNLV-RAASGHVYFTLKDASA 66 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ +W+ + F PE G+ +T + YQ+ +E+L P+G G+L A + Sbjct: 67 QVRCAMWRNRAQLLAFRPENGMRVEARALVTLYEARGDYQLSVEALRPAGIGSLFEAFNR 126 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K KL EGLF + + +P P+ + ++TSP A +RD+L + R P L V+++P V Sbjct: 127 LKAKLAAEGLFDEAGRRALPRYPRALGIVTSPQAAALRDVLVTLRRRAPHLPVVLYPAPV 186 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG + P + A+ D+++L RGGGSIEDLW FNDE + R + + Sbjct: 187 QGADAPARLLEAVRCAGRR---AAEDGVDVLLLVRGGGSIEDLWAFNDEALARTLRACPL 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++ +GHETD+T+AD+AADLRAPTP+GAAE+A ++ L LE RL + R Sbjct: 244 PVVCGVGHETDFTIADFAADLRAPTPSGAAELASAGWYAARAELAVLEPRLRRAVERRFG 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L+ L + + L R L RL L H + R+++ Sbjct: 304 ELAQRLDRAALRLVHPRERLRRERDTLARLGERLHHATARRLEAADLRATRAGLRLRAAA 363 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 R + L + Sbjct: 364 PRPQALAAR------------------------------------------VDMLGGRLA 381 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + TR+ +++ + LQ A + L RGY +D + + Sbjct: 382 RAATRL-------LEARSQRLDALAAHLQHLAPQAVLARGYAIARDKQGRVLRSTAGIPE 434 Query: 482 KTRILINFFDGQANAIVIN 500 + + DG+ + VI Sbjct: 435 GAAVSVQLADGRLDTRVIG 453 >gi|304410030|ref|ZP_07391649.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS183] gi|307302257|ref|ZP_07582015.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica BA175] gi|304351439|gb|EFM15838.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS183] gi|306914295|gb|EFN44716.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica BA175] Length = 448 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 142/498 (28%), Positives = 220/498 (44%), Gaps = 57/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD+ S+I + Sbjct: 3 GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++P+G G L + K KL Sbjct: 62 FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+ Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ ++ L +RL + L Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L +TL R D + LE L + R + +R++ H Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ ++ Sbjct: 356 LTIEGSRLSYLASRLQDALQD--------------------------------------- 376 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 K+ + L++ + TL RGY+ D +N + L + Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVVDSADKLTIGDSL 428 Query: 486 LINFFDGQANAIVINKAP 503 GQ + V P Sbjct: 429 QTRLRHGQVISTVTQIKP 446 >gi|251793136|ref|YP_003007864.1| exodeoxyribonuclease VII large subunit [Aggregatibacter aphrophilus NJ8700] gi|247534531|gb|ACS97777.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter aphrophilus NJ8700] Length = 446 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 138/490 (28%), Positives = 227/490 (46%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 YSVS+L+ ++ ++E+ L V + GEIS + SGH Y SLKD ++++ +++ Sbjct: 7 IYSVSQLNQSVRLMLENQLGPVWLTGEISNF-SQPVSGHWYLSLKDENAQVRCAMFRMKN 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P G++ LV +T + YQ+IIES+ +G G L+ E K KL EGLF Sbjct: 66 MRVGFRPTNGMQVLVHANVTLYEPRGDYQLIIESMHLAGEGLLMQQFEALKLKLAAEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K +P K + +ITS TGA ++DIL + R P L+++I+P VQG + EIA Sbjct: 126 AQHLKKNLPHFSKAVGIITSKTGAALQDILHILQRRDPSLQIVIYPTAVQGKDAAVEIAQ 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N +E D++I+ RGGGS+EDLW FN+E++ RAI +S++P+ISA+GHE D Sbjct: 186 MIELANRRQE------VDVLIVGRGGGSLEDLWCFNEEIVARAIFHSNLPVISAVGHEID 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD+ ADLRAPTP+ AAE+ + L L R+ + RL K L Sbjct: 240 VTIADFVADLRAPTPSAAAELVSRNQTELLQQLQYRRQRIEIALDRLFVEKQQRLRHQSL 299 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + L + + +L L+ +L + + + R+ + L IQ++ Sbjct: 300 RLQNQHPQAQLHIQQQLITQLSHRLQQSLRHHWQKTSENLTALSMRLYKNPLPLRIQQHE 359 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + + + Sbjct: 360 QQLSQLKVRL-----------------------------------------------NSQ 372 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ + ++ L S + L RGY+ Q+ N I + + +I Sbjct: 373 MNLNLGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNQQNLTIRSIKEVNVGEQIRTRLA 432 Query: 491 DGQANAIVIN 500 DG+ + + Sbjct: 433 DGKIVSQISQ 442 >gi|332140456|ref|YP_004426194.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep ecotype'] gi|327550478|gb|AEA97196.1| exonuclease VII, large subunit [Alteromonas macleodii str. 'Deep ecotype'] Length = 454 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 130/502 (25%), Positives = 226/502 (45%), Gaps = 58/502 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F+ S +V++L+ + ++E + + + EIS + +SGH YF+LKDN ++ Sbjct: 6 FTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVA-AASGHWYFTLKDNKAQ 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + A ++KG + P+EG + LV + + YQ+++E + G G L A E Sbjct: 65 VRAAMFKGANRNVRLRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K KL EGLF +K P+P I VITS +GA + D+L + R P VI++P VQ Sbjct: 125 KFKLNNEGLFDATNKRPLPERINRIGVITSSSGAALHDVLSVLKRRSPQTEVIVYPSMVQ 184 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ P ++ NA+ + N E D+++L RGGGS+EDLW FNDE + R IA S++P Sbjct: 185 GEAAPLQLINALRKANQRSE------VDVLLLTRGGGSLEDLWCFNDESLAREIAASTLP 238 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D+T++D+ AD+R+PTP+ AAE+ L ++ + RL + I+ Sbjct: 239 IVSAVGHEVDFTISDFVADVRSPTPSAAAEILSQDSTALYQTINQQKQRLARAMNHCIQA 298 Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L + L + + LDRL L H ++ + + + + R+ Sbjct: 299 NKQQLTLKKQRLDALHPQSRIQSQWQTLDRLQLRLVHAMQRDMSTAEKRVHALNYRLNQQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + + + Sbjct: 359 SPAARVARAKDK-----------------------------------------------L 371 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ ++ +K+ + + + +LQS + +TL RGY+ ++ + + Sbjct: 372 SYANAKLIATMTALLKNKKSELGGSVTLLQSVSPLSTLARGYSITLT-DSTTVNNVSKVN 430 Query: 481 TKTRILINFFDGQANAIVINKA 502 I DG+ + V N Sbjct: 431 VGDEIKTRVTDGEITSTVTNIQ 452 >gi|218778694|ref|YP_002430012.1| exodeoxyribonuclease VII, large subunit [Desulfatibacillum alkenivorans AK-01] gi|218760078|gb|ACL02544.1| exodeoxyribonuclease VII, large subunit [Desulfatibacillum alkenivorans AK-01] Length = 453 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 154/509 (30%), Positives = 259/509 (50%), Gaps = 58/509 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MNP +++ ++VS+L+ +K ++E L V V GEIS I SSGH YF+LKD+ Sbjct: 1 MNPA--QHTQKRRIHTVSQLTAIIKSVLEEALPFVWVTGEISNL-HIPSSGHYYFTLKDD 57 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 H++I ++++KG ++F E+G+ + +G++ + YQ+++E + P+G G L A Sbjct: 58 HAQIRSVMFKGHARNLKFDLEDGMSVVCLGRVAVYEPQGAYQVLVEHMEPAGMGALALAF 117 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K KL EEGLF + HK +P++P+ IAV+TSPTGAVI DIL+ +S RFP + V ++PV Sbjct: 118 EQLKAKLSEEGLFDEDHKKSLPYLPRTIAVVTSPTGAVIHDILRVLSYRFPKVHVQVWPV 177 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG + P +I ++ +N + D++I+ARGGGS+EDL FN E + RAI S Sbjct: 178 KVQGADSPAQIVRSLEMINQQNQA------DVVIIARGGGSLEDLAPFNSEEVARAIFAS 231 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHETD+T+ADY AD RAPTP+ AAE+ +P + L+ L ARL + Sbjct: 232 AIPVISAVGHETDYTIADYTADRRAPTPSAAAEIVLPEYQGLELLLKEYAARLKGAFTLM 291 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 +K + + L +L K LP + + R R+D + + + + + + + + ++ + Sbjct: 292 LKKERDNLLNLKKRLPPPRRQVDDWRLRMDDYQQRIINLTKRGVVENRNNLSTALYKLNN 351 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +H + + K + ++Q +R + Sbjct: 352 LSPLHKTPSLKVMLELKLRQFTGAMQQQMRADKAALSQ---------------------- 389 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRN 478 L++ L+RGY+ + T + + Sbjct: 390 -------------------------ARASLEALNPSAILERGYSITRKTPGMEIVRNVHD 424 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQ 507 L+ + I G+A A + + + Sbjct: 425 LSPGDEVEITLASGKAAAQIKSIEKGTKS 453 >gi|126175187|ref|YP_001051336.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS155] gi|166232365|sp|A3D6V4|EX7L_SHEB5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|125998392|gb|ABN62467.1| Exodeoxyribonuclease VII large subunit [Shewanella baltica OS155] Length = 448 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 142/498 (28%), Positives = 220/498 (44%), Gaps = 57/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD+ S+I + Sbjct: 3 GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++P+G G L + K KL Sbjct: 62 FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+ Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ ++ L +RL + L Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L +TL R D + LE L + R + +R++ H Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALLNRLHILSRRQQLLASRLEQQSPKHK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ ++ Sbjct: 356 LTIEGNRLSYLASRLQDALQD--------------------------------------- 376 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 K+ + L++ + TL RGY+ D +N + L + Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVVDSADKLTIGDSL 428 Query: 486 LINFFDGQANAIVINKAP 503 GQ + V P Sbjct: 429 QTRLRHGQVISTVTQIKP 446 >gi|319637920|ref|ZP_07992686.1| exodeoxyribonuclease 7 large subunit [Neisseria mucosa C102] gi|317401075|gb|EFV81730.1| exodeoxyribonuclease 7 large subunit [Neisseria mucosa C102] Length = 449 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 140/507 (27%), Positives = 241/507 (47%), Gaps = 62/507 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S+ SVSEL+ K ++E +L+ + + GE+S +SGH YFSLKD+ Sbjct: 1 MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLTH-AASGHYYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ +EG V GKI+ + ++QI + + G G L A Sbjct: 55 RAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L EG FS + K P+P P+ I +ITS A +RD++ ++ R P + +I++P Sbjct: 115 ERLKAQLQAEGAFSAERKKPLPARPQCIGIITSLAAAALRDVVTTLNRRAPEIPIIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +IA AI + E D++I+ RGGGSIEDLW FN+E +VRAI Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAKGRLKTVLEQR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L+ L + + + Q L R + +L + L +++ + F +K Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDDQRASISKLAQTLSYSMTQNLRAHTARFERQTQTLKH 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +I K+ H + + R + ++ Sbjct: 349 CHPDVSIYKHNID------HFQTALSHSFRQLLTHRR----------------------- 379 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 S++ +L++ + ++ L+RG++ +++T I L Sbjct: 380 --------------------QSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADTL 419 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 ++ I F DG+ + V + E Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQGE 446 >gi|330504668|ref|YP_004381537.1| exodeoxyribonuclease VII large subunit [Pseudomonas mendocina NK-01] gi|328918954|gb|AEB59785.1| exodeoxyribonuclease VII large subunit [Pseudomonas mendocina NK-01] Length = 459 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 142/500 (28%), Positives = 228/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF++ N LD SVS+L+ + ++E + + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFARLN-LDREVLSVSQLNNRARLLLEDVFTGIWVEGEISNL-ARPASGHIYFTLKDSQ 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 62 AQVRCALFRQNAARVRQALRDGLAVKVRGKVSLFEGRGDYQLILDAVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLF+ + K +P PK I ++TSPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLGAEGLFATERKIALPAHPKRIGIVTSPTGAVIRDIISVFRRRAPQVELNLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + +I A+ + + L D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 182 VQGRDATAQIVRALQRADAL-------GFDALILARGGGSLEDLWCFNEEAVARAVAGCI 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD ++AD+ AD+RAPTP+ AAE+ P L L NL+ RL + + Sbjct: 235 TPIVSAVGHETDVSIADFVADVRAPTPSAAAELLAPDSSELVQRLHNLQRRLVLHMQGRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L K L + + L RLD L L + + + R+ + Sbjct: 295 ARERLRLEGTSKRLRHPGERLRQQAQRLDDLDMRLRRAFNQQLANQRERLARLDARLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + ++ LR Sbjct: 355 HPGRGLALLRQRLDGLAARLPRAMQAQLRSQ----------------------------- 385 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D + Sbjct: 386 ------------------RQQLGAVAAQLQIVSPLATLGRGYSILLDERGQAVRSAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ + V + Sbjct: 428 PGQRLKARLSEGELDVRVED 447 >gi|114771711|ref|ZP_01449115.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium HTCC2255] gi|114547783|gb|EAU50673.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium HTCC2255] Length = 452 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 185/495 (37%), Positives = 266/495 (53%), Gaps = 50/495 (10%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ + PE+SVSELS LK ++E S+V +RGE+ G +SGH YF LK Sbjct: 1 MSDLIDSPVKGENAPEFSVSELSSVLKRMIEGEFSNVRIRGEV-GRVSRPASGHLYFDLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ S I ++ WKG +K+ PEEG+E + GKITTF G S+YQ+I+ + +G G L+ Sbjct: 60 DDKSVIASVTWKGQASKLVTQPEEGLEVVATGKITTFAGQSRYQMIVSEMSVAGIGALMA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 LEKRKKKL EGLF K IP++P+II V+TSP+GAVI+DIL R+S RFP +V+++P Sbjct: 120 QLEKRKKKLEAEGLFDKSIKKEIPYLPEIIGVVTSPSGAVIQDILHRLSDRFPRKVLLWP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG+ C ++A AI N L G PRP++II+ARGGGSIEDLW FN+E +VRA A Sbjct: 180 VAVQGERCAPDVAAAINGFNRLTPGGAMPRPELIIVARGGGSIEDLWGFNEESVVRAAAE 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S IP+ISA+GHETD TL D+A+DLRAPTPT AAE AVPV+ L L +++ R + Sbjct: 240 SEIPLISAVGHETDTTLIDFASDLRAPTPTAAAEYAVPVRADLMGWLSSMDERRVRSLSA 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ K L L + LP D+ ++ S RLD + L L + K ++ Sbjct: 300 GLEIKRQRLKDLSRGLPAPDELVAMSTQRLDSISERLPRALITVSNNKRTMLLQTSAGLR 359 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L + + + I + I+ +K ++ Sbjct: 360 GSLLKNKLVDRSEAINRFVKSIQSNMKVIIQ----------------------------- 390 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 +++ R+ Q+ Y+ TL+RGY I++ +T + Sbjct: 391 ------------------RNQSALESLERLRQTLGYEATLQRGYAVIRNEKGGIVTSVKV 432 Query: 479 LATKTRILINFFDGQ 493 + I F DG+ Sbjct: 433 ADVSKSLEIEFQDGK 447 >gi|163749540|ref|ZP_02156787.1| exodeoxyribonuclease VII large subunit [Shewanella benthica KT99] gi|161330650|gb|EDQ01587.1| exodeoxyribonuclease VII large subunit [Shewanella benthica KT99] Length = 442 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 136/491 (27%), Positives = 230/491 (46%), Gaps = 57/491 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ ++E L + + EIS + SGH Y +LKDN ++I ++KG Sbjct: 6 NNVYTVSRLNGEVRQLLEGELGKIWLNAEISNF-AAPGSGHWYLTLKDNQAQIRCAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ+II+S++P+G G L E K KL EG Sbjct: 65 RNRSVTFKPINGQQVLVKGSISVYEPRGDYQLIIQSMLPAGDGLLAQQYEALKIKLAAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K PIP + I VITS TGA ++D+L ++ R P + V+I+P +VQG+ ++I Sbjct: 125 LFAADTKRPIPSNIQKIGVITSATGAALKDVLHVLARRDPSIEVVIYPTQVQGEPAVQQI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 NAI N +E D+++L RGGGS+EDLW FN E + I NS++P++SAIGHE Sbjct: 185 CNAIAMANARQE------VDVLLLTRGGGSLEDLWCFNSEELAHEIYNSALPLVSAIGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D +++DY AD+RAPTP+ AE+ E+ + L +RL + +++L Sbjct: 239 IDTSISDYVADMRAPTPSAGAELLSKDTENKREKLELFISRLRQSWQHYQLKTNSRMSTL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L ++ L D + L+ ++ + + +R+ ++ +Q Sbjct: 299 THRLQRQDPNRRLQQYGQSFDEMQFRLDAAIDKKLTSLALKQQQLSHRLNQQSPVNKLQL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 Q + ++ Sbjct: 359 ESQRLSYLTSR-----------------------------------------------LK 371 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + K+ S S+S++ LQ+ + TL RGY+ Q +N + +++ + Sbjct: 372 DSIKEKLASSEQSLSVSAHQLQTVSPLATLSRGYSITQYSNGKVLLNASDVSVGDMLTTR 431 Query: 489 FFDGQANAIVI 499 +G+ + VI Sbjct: 432 LLEGEVQSKVI 442 >gi|119468951|ref|ZP_01611976.1| exodeoxyribonuclease VII large subunit [Alteromonadales bacterium TW-7] gi|119447603|gb|EAW28870.1| exodeoxyribonuclease VII large subunit [Alteromonadales bacterium TW-7] Length = 443 Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats. Identities = 149/487 (30%), Positives = 226/487 (46%), Gaps = 57/487 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ ++E + + + GEIS + +SGH YFSLKD+ ++I A +W+G Sbjct: 9 VYTVSRLNREIRTVLEQGFASLVLTGEISNFIA-PASGHWYFSLKDDKAQIKAAMWRGNN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + PE G + V +++ + YQ+I+E + P+G G L + K +L EGLF Sbjct: 68 RSQSYRPENGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQEFDALKMRLAAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 S +K P+P I VITS TGA I+DIL + R P L VII+P VQG E + N Sbjct: 128 SSAYKKPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKEAHVHLIN 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N E DI+IL RGGGS+EDLW FN E + RAI NS +PIISA+GHE D Sbjct: 188 QIELANARNE------VDILILGRGGGSLEDLWCFNHEQLARAIHNSDLPIISAVGHEID 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T++DY AD+RAPTP+ AAE+ P + L S + L RLNN I K L Sbjct: 242 TTISDYVADMRAPTPSAAAELVSPNTQELHSKVTQLINRLNNAFKHSIADKRALATQLQH 301 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + L+ RLD L L+ ++ ++++ R N++ R+ + + Sbjct: 302 RLNLCHPRNQLNQKAQRLDELSIALQQAMQSRLYQQERTLNNLTPRLMRQSPDKKLAQAS 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + Q + Q ++Q L+ Sbjct: 362 HQLSQLQARLNQAIQQQLQQANN------------------------------------- 384 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 S+++ L S + N L RGY+ + + + ++ Sbjct: 385 ----------SLALQASKLDSVSPLNVLARGYSITKTQQGKVVKSVGQIKAGDVLVTELV 434 Query: 491 DGQANAI 497 DG + Sbjct: 435 DGSVKST 441 >gi|153001513|ref|YP_001367194.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS185] gi|166232366|sp|A6WQP2|EX7L_SHEB8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|151366131|gb|ABS09131.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS185] Length = 448 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 142/498 (28%), Positives = 220/498 (44%), Gaps = 57/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD+ S+I + Sbjct: 3 GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++P+G G L + K KL Sbjct: 62 FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+ Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ ++ L +RL + L Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L +TL R D + LE L + R + +R++ H Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ ++ Sbjct: 356 LAIEGNRLSYLASRLQDALQD--------------------------------------- 376 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 K+ + L++ + TL RGY+ D +N + L + Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVVDSTDKLTIGDSL 428 Query: 486 LINFFDGQANAIVINKAP 503 GQ + V P Sbjct: 429 QTRLRHGQVISTVTQIKP 446 >gi|238752468|ref|ZP_04613944.1| Exodeoxyribonuclease 7 large subunit [Yersinia rohdei ATCC 43380] gi|238709317|gb|EEQ01559.1| Exodeoxyribonuclease 7 large subunit [Yersinia rohdei ATCC 43380] Length = 469 Score = 360 bits (925), Expect = 3e-97, Method: Composition-based stats. Identities = 143/521 (27%), Positives = 229/521 (43%), Gaps = 57/521 (10%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ Sbjct: 2 SQSSTSTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ T + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK +P K + VITS +GA + D+LQ + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQTHKQALPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGVD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELMRQIQGQQQRMEMAMDYYLAQRSQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R + +L R L + + I + YR + R+ Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLAESAQAQIRQLYRRTERLQQRLIQVQPQ 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + Q + +++ + Q Sbjct: 355 GQIHRYNQRVQQQEYRLHQ----------------------------------------- 373 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L ++ I L++ + TL RGY+ Q + + + Sbjct: 374 ------ALERQLNGYRQRFGIACSQLETVSPLATLARGYSVTQTPKGAVLKTTQQVHAGD 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524 ++ DG + + K K ++ K Sbjct: 428 KLTTRLQDGWVESEITQIKVTKNAMAKNDAPKKPRQRKAAE 468 >gi|90407906|ref|ZP_01216081.1| exodeoxyribonuclease VII large subunit [Psychromonas sp. CNPT3] gi|90310997|gb|EAS39107.1| exodeoxyribonuclease VII large subunit [Psychromonas sp. CNPT3] Length = 443 Score = 360 bits (925), Expect = 3e-97, Method: Composition-based stats. Identities = 145/495 (29%), Positives = 231/495 (46%), Gaps = 57/495 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 NS + YSV+ L+ K ++E L + + EIS I SGH YF+LKD+ +++ Sbjct: 2 NSENKNIYSVTRLNRAAKSLLEDGLGVIWLSAEISNLT-IAVSGHWYFTLKDHSAQVKCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG + F P+ G + LV GK++ + YQ+IIES+ G G L E K +L Sbjct: 61 MFKGNNRRTLFTPKHGQQVLVRGKLSLYETRGDYQLIIESMQAEGDGALKQQFEALKCQL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLFS +HK P+P I K + ++TS TGA + DIL + R P L VII+P VQG Sbjct: 121 AGEGLFSAEHKKPLPQIIKRVGIVTSSTGAALFDILSVLKRRDPRLEVIIYPSLVQGKSS 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N E D++I+ RGGGS+EDL+ FND + AI +S +PIISA Sbjct: 181 AASIVAQINLANARHE------CDLLIVGRGGGSLEDLYCFNDINVAYAIFHSQLPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D T++D+ AD+RA TP+ AAE+ K + + L L RL I +++ + Sbjct: 235 VGHEIDVTISDFVADIRAATPSAAAELVSQNKTFVSTQLSTLTTRLQRAIHSYMQHNSHL 294 Query: 307 LNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L L D L L H ++ ++ R + + ++ + Sbjct: 295 HALLKEKLRQQDPQHKLQQKTLMTDELSLRLSHAMQQMLHRAVQKNASLNAHLQQNSPQK 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 NI+ +Q ++ ++ + L+ + + K+A Sbjct: 355 NIEIEKQKQIQLYTRLKNSLLNTLQQKQMYLQTKMA------------------------ 390 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + TL RGY ++D +T +L +++ Sbjct: 391 -----------------------RLNAVSPLATLARGYAIVKDAQGKVVTDATSLKEESK 427 Query: 485 ILINFFDGQANAIVI 499 + I+F G+ A +I Sbjct: 428 LNIHFAKGEVQARII 442 >gi|269214382|ref|ZP_06158546.1| exodeoxyribonuclease VII, large subunit [Neisseria lactamica ATCC 23970] gi|269209962|gb|EEZ76417.1| exodeoxyribonuclease VII, large subunit [Neisseria lactamica ATCC 23970] Length = 451 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 133/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K ++E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ ++ R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPTPVQGTGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI +IPI+S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACAIPIVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L++ Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLVR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L + +L + L +++ + F ++ ++ + Sbjct: 302 QIRHPRQKLDEQHTYIHKLAQTLSYSMTQNVRAHTARFERQTQALQHCRPDISVYR---- 357 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I T + ++ Sbjct: 358 --------------------------------------QDIERFQTTLSHAFRQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 375 --LARHRQSLTAQASLLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|312884310|ref|ZP_07744019.1| exodeoxyribonuclease VII large subunit [Vibrio caribbenthicus ATCC BAA-2122] gi|309368083|gb|EFP95626.1| exodeoxyribonuclease VII large subunit [Vibrio caribbenthicus ATCC BAA-2122] Length = 442 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 143/494 (28%), Positives = 236/494 (47%), Gaps = 58/494 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ + Sbjct: 4 SNNPNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++G + F P+ G + LV +++ + YQ+IIES+ G G L E K KL Sbjct: 63 FRGNNRHVTFKPQNGNQVLVKARLSLYEPRGDYQLIIESMQAEGDGKLQQQFEALKLKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P PK + +ITS TGA + DIL + R P L VII+P VQGDE Sbjct: 123 AEGLFAQSSKQPLPEHPKRVGIITSKTGAALFDILDVLKRRDPSLPVIIYPTMVQGDEAA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 IA AI N+ E D++I+ RGGGS+EDLW FN+EM+ R IA+S IPIISA+ Sbjct: 183 ISIAQAIGCANSRNE------CDVLIVGRGGGSLEDLWCFNNEMVARTIASSQIPIISAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+AD+ AD+RA TP+ AAE+ H +L + +L + + + + + + Sbjct: 237 GHEIDVTIADFVADVRAATPSAAAELVSRDNSHKAQALSTKQNKLISAMRYYLSEQKHHI 296 Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N+ + L +LD L L ++ +I + + I +R++ I Sbjct: 297 NAFTHRVERQHPRYRLQQQSQQLDDLESRLMSAIQRLINHQRQQVEKIQHRMELHSPIKR 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + +L +Q Sbjct: 357 MASQKAQLLGLEQ----------------------------------------------- 369 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ + K+ + ++I+ L + + TL+RGY+ + +T ++ T I Sbjct: 370 KLLDAMDRKLLNARHQLAISAEKLDTVSPLATLQRGYSITKTAQ-KIVTHTSDVKTGDTI 428 Query: 486 LINFFDGQANAIVI 499 + DG+ +IV Sbjct: 429 ITRLVDGEIQSIVK 442 >gi|197106405|ref|YP_002131782.1| exodeoxyribonuclease large subunit [Phenylobacterium zucineum HLK1] gi|196479825|gb|ACG79353.1| exodeoxyribonuclease large subunit [Phenylobacterium zucineum HLK1] Length = 487 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 165/528 (31%), Positives = 255/528 (48%), Gaps = 48/528 (9%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + + YSVSEL++ LK +E V +RGE+S HS+GH Y +LKD+ Sbjct: 8 TDAAGPTDGNARPYSVSELAFALKRTLEDAYGFVRLRGELSKVTH-HSNGHVYLTLKDDK 66 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + ID ++WKG + + PE+G+E +V GKIT +P S+YQI+IE++ +G G LL LE Sbjct: 67 AAIDGVVWKGQVRNLSIRPEQGMEVVVTGKITAYPQGSRYQIVIETMEAAGVGALLAQLE 126 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 + K +L EGLF+ + K P+P +P ++ VITSPTGAVIRDIL RI R+P V+++PV V Sbjct: 127 RLKARLAGEGLFAAERKKPLPTMPSVVGVITSPTGAVIRDILHRIRDRWPCHVVVWPVVV 186 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD ++ AI L PRPD++I+ARGGGS+EDLW FNDE + R +A +I Sbjct: 187 QGDAAAGQVCAAIRGFCALDPAGPVPRPDVLIVARGGGSVEDLWPFNDETLARTVAGCTI 246 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHETD TL D+ +D RAPTPT AAEMA PV L++++ + ARL+ R+++ Sbjct: 247 PLISAVGHETDTTLIDFVSDRRAPTPTAAAEMATPVLSELKAAVGDHGARLHRCAGRVVE 306 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + + +AL + + R + L L R + +R+ Sbjct: 307 DRRGRVQHADRALKRVPDLVELAAQRFGIVSGRLAAGLSRNAAAHERDLVRVASRLSPLL 366 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L R+ + ++ Sbjct: 367 LQRPQAVQRERLEALSVRLKP--------------------------------------- 387 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + +++ + ++ S L+RG+ + + + + +LA+ Sbjct: 388 --------CMDRRLERLSERLDALAKLYASVDPDRPLQRGFARVTRADGSIVHAGASLAS 439 Query: 482 KTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + I F D VI+ A + QG+LF Sbjct: 440 GEEVAIKFGDAVTRQAVIDGADGAPPAPPTPAAAKKPKMTPPLQGDLF 487 >gi|109899426|ref|YP_662681.1| exodeoxyribonuclease VII, large subunit [Pseudoalteromonas atlantica T6c] gi|123360492|sp|Q15R61|EX7L_PSEA6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|109701707|gb|ABG41627.1| Exodeoxyribonuclease VII large subunit [Pseudoalteromonas atlantica T6c] Length = 444 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 142/498 (28%), Positives = 234/498 (46%), Gaps = 58/498 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + ++VS+L++ + ++ES + V + EIS + SSGH YF+LKDN ++ Sbjct: 1 MFSASPANRNIFTVSKLNHLARSVLESEIGQVWLSAEISNFVA-ASSGHWYFTLKDNRAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I + ++KG K+ P+EG + LV ++ + YQ+I+E L P G G L E Sbjct: 60 IKSAMFKGANRKVMTRPKEGDKVLVQANLSIYEPRGDYQLIVEHLEPEGEGQLKRQFEAL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K L +GLF++++K P+P I V+TS TGA + DIL + R P + VII+P +VQ Sbjct: 120 KLALSAQGLFANENKQPLPDSISRIGVVTSATGAALHDILTVLKRRNPAVEVIIYPTQVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G ++I +I N E DI+I+ RGGGS+EDLW FN+E + AI S +P Sbjct: 180 GANASRQICRSIEIANQRNE------VDILIVGRGGGSLEDLWCFNEENVAWAIHYSVLP 233 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D T+AD+ ADLRAPTP+ AAE+ + + S+L RL L+K Sbjct: 234 IVSAVGHEVDITIADFVADLRAPTPSAAAELVSQSQIEMLSALTAKRDRLYKNTRTLLKE 293 Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 SL + L + L R+D + HN+ + R + + I+++ Sbjct: 294 LHYQQQSLTQELNTYHPKNQLRQHMQRVDNQLTAITHNMTTRLMRAKQTCDSRISKLSQL 353 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 +++ + Q + Q + Sbjct: 354 SPKALLKEQQNTHNLLSQRLTQAWR----------------------------------- 378 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ H ++ + +L + + +TL RGY+ N+ + +++LA Sbjct: 379 ------------RGVEQRHLKLANASHLLDTVSPLSTLARGYSITF-KNDKVVKSQKDLA 425 Query: 481 TKTRILINFFDGQANAIV 498 I F DG+ + V Sbjct: 426 KGDVITNRFADGETKSTV 443 >gi|24374805|ref|NP_718848.1| exodeoxyribonuclease VII large subunit [Shewanella oneidensis MR-1] gi|31563133|sp|Q8EC50|EX7L_SHEON RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|24349486|gb|AAN56292.1|AE015767_1 exodeoxyribonuclease VII, large subunit [Shewanella oneidensis MR-1] Length = 445 Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats. Identities = 141/491 (28%), Positives = 217/491 (44%), Gaps = 57/491 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD+ S+I ++KG Sbjct: 6 NNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFST-PSSGHWYLTLKDHFSQIRCAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + +V G I+ + YQ++IES++P+G G L E K KL G Sbjct: 65 RNQSVSFKPVNGQQVIVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFEALKMKLAALG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K +P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ I Sbjct: 125 LFAADTKRALPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGENADINI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N E D+++L RGGGS+EDLW FN E + I NS++PI+SA+GHE Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T++DY AD+RAPTP+ AE+ ++ L + ARL + L+ L Sbjct: 239 VDTTISDYVADVRAPTPSAGAELLSQDSDNKSQRLATVLARLKQSASHYQLKQERRLSLL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L +TL R D + LE L + R + +R++ H + Sbjct: 299 EHRLQRLDPKRTLQQFEQRFDEMQLRLEAALTNKLHGLSRRQQQLASRLEQQSPKHKLAL 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++ Sbjct: 359 EANRLSYLATRLQ----------------------------------------------- 371 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + K+ + L++ + TL RGY+ D N IT ++ I Sbjct: 372 DAMQDKLSHSGQRIKYVAHQLETVSPLATLSRGYSITTDVNGAVITSASQISLGDTITTQ 431 Query: 489 FFDGQANAIVI 499 + + + V Sbjct: 432 LSNERLMSTVT 442 >gi|119946572|ref|YP_944252.1| exodeoxyribonuclease VII, large subunit [Psychromonas ingrahamii 37] gi|119865176|gb|ABM04653.1| Exodeoxyribonuclease VII large subunit [Psychromonas ingrahamii 37] Length = 447 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 151/497 (30%), Positives = 228/497 (45%), Gaps = 57/497 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S + YSVS L+ K ++E+ L + + GEIS I SGH YF+LKD+ +++ + Sbjct: 4 SENKNIYSVSSLNRAAKALLETGLGVIWLSGEISNLT-IAVSGHWYFTLKDHSAQVRCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P+ G + LV K++ + YQ+IIES+ P G G L E K KL Sbjct: 63 FKGNNRRSGFTPKHGQQVLVRAKLSLYEARGDYQLIIESMAPEGDGLLKQQFEALKFKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLFS+ HK P+P + K I +ITS TGA + DIL + R P L+VII+P VQG Sbjct: 123 AEGLFSESHKKPLPQLIKCIGIITSSTGAALHDILSILKRRDPRLKVIIYPSLVQGASSA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +A I N E D++I+ RGGGS+EDLW FN+ ++ AI +S +PIISA+ Sbjct: 183 ASVAAQIKLANARHE------CDLLIVGRGGGSLEDLWCFNEALVAYAIYDSQLPIISAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+AD+ AD+RA TP+ AAE+ K Q+ L L R+ I+ ++ K + Sbjct: 237 GHEIDVTIADFVADVRAATPSAAAELVSQNKAFHQTQLDTLTNRMKQAILARLQLKSHQH 296 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + + L + L +LD L L+H + + + R + + + Sbjct: 297 ALIREKLLNLHPKHKLQQQTLQLDELSLRLQHAFQATMNQAKRDLQRLQSGLFQHSPEGI 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I +Q + Q +E V+ L + K Sbjct: 357 ISVEQQKQKQLQHRLEHAVQVTLNQKTTLLQNK--------------------------- 389 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + + TL RGY ++D N T L +I Sbjct: 390 --------------------SSRLNTVSPLATLARGYAIVKDKNGKITTDTAMLQPGDKI 429 Query: 486 LINFFDGQANAIVINKA 502 + G+ A V+ Sbjct: 430 EVRLDKGEFEAQVLGGE 446 >gi|120598183|ref|YP_962757.1| exodeoxyribonuclease VII large subunit [Shewanella sp. W3-18-1] gi|120558276|gb|ABM24203.1| Exodeoxyribonuclease VII large subunit [Shewanella sp. W3-18-1] Length = 466 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 223/498 (44%), Gaps = 57/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD++S+I + Sbjct: 21 GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHYSQIRCAM 79 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++P+G G L + K KL Sbjct: 80 FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 139 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ Sbjct: 140 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAD 199 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI N E D+++L RGGGS+EDLW FN E + I NS++PI+SA+ Sbjct: 200 LSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAV 253 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ E+ L + +RL + + L Sbjct: 254 GHEVDTTISDYVADIRAPTPSAGAELLSQDSENKAQRLATVLSRLQQSVRHYQLKQERRL 313 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L +TL R D + LE L + R + +R++ H Sbjct: 314 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHLLSRRQQLLASRLEQQSPKHK 373 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ ++ Sbjct: 374 LAIEGTRLSYLASRLQDALQD--------------------------------------- 394 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 K+ + L++ + TL RGY+ D +N I LA + Sbjct: 395 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVIDSVDKLAIGDDL 446 Query: 486 LINFFDGQANAIVINKAP 503 GQ + V P Sbjct: 447 QTRLRYGQVISTVTQIKP 464 >gi|332532704|ref|ZP_08408580.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas haloplanktis ANT/505] gi|332037920|gb|EGI74369.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas haloplanktis ANT/505] Length = 443 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 144/489 (29%), Positives = 220/489 (44%), Gaps = 57/489 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ I+E + + + GEIS + +SGH YFSLKD+ ++I A +W+G Sbjct: 9 VYTVSRLNREIRTILEQGFASLVLTGEISNFIT-PASGHWYFSLKDDKAQIKAAMWRGNN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + P G + V +++ + YQ+I+E + P+G G L + K +L EGLF Sbjct: 68 RNQSYRPANGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQEFDALKMRLAAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 S +K P+P I VITS TGA I+DIL + R P L VII+P VQG E + N Sbjct: 128 SSAYKKPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKEAHLHLIN 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N E D++IL RGGGS+EDLW FN E + RAI S +PI+SA+GHE D Sbjct: 188 QIELANARDE------VDVLILGRGGGSLEDLWCFNHEQLARAIFESELPIVSAVGHEID 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T++DY AD+RA TP+ AAE+ P + L + + L RL+N I K L Sbjct: 242 TTISDYVADVRAATPSAAAELVSPNTQELHNKVTQLVNRLSNAFKHGIADKRALATQLQH 301 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + LS RLD L L+ + ++++ R N++ R+ + Sbjct: 302 RLNLCHPRNQLSQKSQRLDELSIALQQAMRNRLYQQERTLNNLTPRLMRQSPDKKLTSAS 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + Q + Q ++ L+ + Sbjct: 362 HQLSQLQARLNQAIQHQLQQANNSLALQ-------------------------------- 389 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L S + N L RGY+ + + + T ++ Sbjct: 390 ---------------ASRLDSVSPLNVLARGYSITKIQQGKVVKSVGQIKTGDVLVTELV 434 Query: 491 DGQANAIVI 499 DG + +I Sbjct: 435 DGSIESQII 443 >gi|326793641|ref|YP_004311461.1| exodeoxyribonuclease 7 large subunit [Marinomonas mediterranea MMB-1] gi|326544405|gb|ADZ89625.1| Exodeoxyribonuclease 7 large subunit [Marinomonas mediterranea MMB-1] Length = 453 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 142/491 (28%), Positives = 226/491 (46%), Gaps = 56/491 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 P +SVSEL+ ++ ++E++L + V GEIS +SGH YFSLKD+ ++I ++ Sbjct: 9 TSEPTFSVSELNRQIQQLLEASLPWILVEGEISNL-ARPASGHWYFSLKDDKAQIRCAMF 67 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K + + F P++G + K+T + Q+ +ES+ G G L A ++ K KL Sbjct: 68 KNRNSAVRFRPKDGDHVRLRAKVTFYGPKGDCQLTVESMESGGEGALQAAYDRLKAKLQL 127 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF HK P+P P+ IA+ITSP GA IRD++ RFPL + I P VQG Sbjct: 128 EGLFEQNHKKPLPKRPERIAIITSPAGAAIRDMIIAFRRRFPLTELTILPSLVQGQGSAA 187 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + + + + D II+ RGGGS+EDLW FNDE++ R+I + + PI+SA+G Sbjct: 188 NLTKQLER------ADSSGHFDAIIIGRGGGSLEDLWSFNDELLARSIFHCTTPIVSAVG 241 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD+ AD+RA TPT AAE+ P L S L E +L I + + L+ Sbjct: 242 HETDFTIADFVADIRAATPTAAAELLSPEISTLLSGLKQSELKLTRRIESITQTAQQRLD 301 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 LLK + + + L + +L L L+ ++ + K ++ S + I K Sbjct: 302 FLLKRIRHPKERLDIQQDKLHNLNHRLKEGIQKHLDSKQVRLEKDSIKLMSTSPMRTIVK 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + +I + + + + +K + Sbjct: 362 EQAYIEQLEGRLNRALKSTMTSKATT---------------------------------- 387 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + L + NTL RGY + I K +++ + + I Sbjct: 388 -------------FTRLVEQLNLVSPLNTLARGYAIAT-QDKKVIRSKDDISVGSTLNIK 433 Query: 489 FFDGQANAIVI 499 DG + V Sbjct: 434 VEDGSFDCQVT 444 >gi|261417746|ref|YP_003251428.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. Y412MC61] gi|319767442|ref|YP_004132943.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. Y412MC52] gi|261374203|gb|ACX76946.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. Y412MC61] gi|317112308|gb|ADU94800.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. Y412MC52] Length = 448 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 235/498 (47%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V L+ ++K V+ +L + V+GEIS ++ HS GH YF+LKD+ RI A+ Sbjct: 1 MEVKYVTVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQGRIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F PE+G+ L G+I+ + + YQ+ ++ + P G G+L A E+ K++L Sbjct: 60 MFAGYNQYLPFRPEDGMNVLARGEISVYEPNGNYQLYVKEMQPEGVGSLYLAYEQLKQRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS HK P+P P+ I V+TSPTGA +RDI+ I R+PL +VI+FP VQGD Sbjct: 120 EAEGLFSPVHKKPLPAFPRCIGVVTSPTGAAVRDIMTTIRRRYPLAKVILFPALVQGDGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI + N D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA Sbjct: 180 APSIVRAIERANAF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKI 304 +GHETD+T+AD+ ADLRAPTPT AAEMA P L L + RL + + Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAEMAAPHVGELAERLAERKWRLIRAMKERLAADKEQ 293 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 A + +LD L L E ++ + + + + R+ Sbjct: 294 LRRLQGSYAFRYPKRLYEQKEQQLDALLERLSRQRERLVDKHRQRLHELDMRLWRHHPAA 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ ++ +E+ ++ + + +A Sbjct: 354 ELERMKERQKATANALEKAMRTAVERHRFRFRSNLA------------------------ 389 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L++ + ++RGY+ + + + + L Sbjct: 390 -----------------------RLEALSPLRIMERGYSLVYNEQGELVKRTNQLRIGEH 426 Query: 485 ILINFFDGQANAIVINKA 502 + I DG+ + V Sbjct: 427 LSIQVQDGRVDCQVTGVE 444 >gi|88858307|ref|ZP_01132949.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas tunicata D2] gi|88819924|gb|EAR29737.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas tunicata D2] Length = 449 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 140/500 (28%), Positives = 236/500 (47%), Gaps = 57/500 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N YSVS L+ ++ ++E N + + + GEIS + SSGH YF++KD+H++I A Sbjct: 4 NQKSPSVYSVSRLNKEIRQLLERNFASITITGEISNFVS-PSSGHWYFTVKDDHAQIRAA 62 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +W+G + F P+ G + + +I+ + YQ+I+E + P+G G L E K +L Sbjct: 63 MWRGNNQAMRFKPKNGDQVQMQARISLYEPRGDYQLIVEQMEPAGEGALKLQFEALKMQL 122 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLFS HK P+P I + +ITS TGA ++DIL + R P L ++I+P +VQG+ Sbjct: 123 ASEGLFSASHKKPLPSIINKVGIITSATGAAVKDILTVLQRRAPQLEIVIYPAQVQGNTA 182 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +++ I N+ KE D+IIL RGGGS+EDLW FN+E + RAI S IPI+SA Sbjct: 183 HQQLIEKISLANSRKE------VDVIILGRGGGSLEDLWCFNNESLARAIFTSQIPIVSA 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++DY AD+RA TP+ AAE+ P + L S + + L N + + Sbjct: 237 VGHEIDFTISDYVADIRAATPSAAAELVSPNQAQLFSLITQQKQALFNAFKHYLAIQQRN 296 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L + L RLD L LE ++ + + + + NR+ Sbjct: 297 AVAIKHRLSLCHPQSQLQQKSQRLDELSINLEQAIKQKLLGAQKSCSSLNNRLMLRSPNL 356 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q+++ + + + +E +L Sbjct: 357 KLQQSQHQLNKLKTKLET---------------------------------------QLQ 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ ++++ L S + L RGY+ ++ I + ++ Sbjct: 378 QQLKQA--------SNNLALQAARLNSVSPLTVLARGYSITKNEQGQIINSILQIKPDSK 429 Query: 485 ILINFFDGQANAIVINKAPP 504 + DG A ++ Sbjct: 430 MTTTLIDGDFTAQILEINSK 449 >gi|91792626|ref|YP_562277.1| exodeoxyribonuclease VII large subunit [Shewanella denitrificans OS217] gi|122968862|sp|Q12PS2|EX7L_SHEDO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|91714628|gb|ABE54554.1| Exodeoxyribonuclease VII large subunit [Shewanella denitrificans OS217] Length = 446 Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats. Identities = 133/497 (26%), Positives = 222/497 (44%), Gaps = 57/497 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + + Y+VS L+ ++ I+E + + + GEIS + SSGH Y +LKD HS+I + Sbjct: 3 AAKNNVYTVSRLNGEVRQILEGQIGKIWLNGEISNFSS-PSSGHWYLTLKDTHSQIRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ+++ES++P+G G L E K KL Sbjct: 62 FKGRNQSVNFRPVNGQQVLVKGAISVYEPRGDYQLLLESMLPAGDGLLAQEYEALKMKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187 EGLF+ + K +P + I +ITS TGA +RD+L + R + V+++P +VQG Sbjct: 122 AEGLFASETKRALPSNIQRIGIITSATGAALRDVLHVLQRRDASIEVVVYPTQVQGTSAS 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI N E D+++L RGGGS+EDLW FN+EM+ +I NS++P++SA+ Sbjct: 182 DNICRAIELANKRLE------VDVLLLTRGGGSLEDLWCFNNEMLAHSIYNSALPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ K + L + +RL + + Sbjct: 236 GHEVDTTISDYVADVRAPTPSAGAELLSQDKGNKAQKLALMLSRLAQGMRHYQLSQDKHF 295 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 +L L + L + D L++ + + R + +++ H Sbjct: 296 VNLQHRLNQQDPKRRLQQLEQQFDEFQLRLDNAFKHRLSRLTLRHERLSAQLQRQSPEHK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ Q + + +K + Sbjct: 356 LRLAHQALTHVSGRFDDAIK--------------------------------DTLGSAEQ 383 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R++ + L++ + TL RGY+ + N IT + + Sbjct: 384 RLKQAVH---------------QLEAMSPLATLSRGYSISSNANGKVITDASKVKVGDSL 428 Query: 486 LINFFDGQANAIVINKA 502 GQ + VI+ Sbjct: 429 HTRLAKGQLVSTVIDVE 445 >gi|62128713|gb|AAX66416.1| exonuclease VII, large subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] Length = 423 Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats. Identities = 138/475 (29%), Positives = 215/475 (45%), Gaps = 57/475 (12%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 + V + GEIS + +SGH YF+LKD+ +++ +++ + ++ F P+ G + LV Sbjct: 1 MGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRAN 59 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 IT + YQII ES+ P+G G L E+ K KL EGLF QHK P+P + VI Sbjct: 60 ITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQHKQPLPSPAHCVGVI 119 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 TS TGA + DIL + R P L VII+P VQGD+ P +I AI N E D Sbjct: 120 TSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANARGE------CD 173 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 ++I+ RGGGS+EDLW FNDE + RAI S IP++SA+GHETD T+AD+ ADLRAPTP+ A Sbjct: 174 VLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAA 233 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-- 328 AE+ ++ L + + + RL + + + + L L +R + Sbjct: 234 AEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTAL 293 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 +RL + + LE I + + + R+ I + + I + + Sbjct: 294 ERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQPRIHRAQSRIQQLEYR--------- 344 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + + ++ Sbjct: 345 --------------------------------------LTENIRSRLSEQRERFGNAVTH 366 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 L++ + TL RGYT T+ + + + + + DG + V + P Sbjct: 367 LEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 421 >gi|325128447|gb|EGC51328.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis N1568] Length = 451 Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats. Identities = 134/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI +IP++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ + Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISVYRQ--- 358 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I T + ++ Sbjct: 359 ---------------------------------------DIDRFQTTLSHAFRQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 375 --LARHRQSLAAQASLLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|212710854|ref|ZP_03318982.1| hypothetical protein PROVALCAL_01922 [Providencia alcalifaciens DSM 30120] gi|212686551|gb|EEB46079.1| hypothetical protein PROVALCAL_01922 [Providencia alcalifaciens DSM 30120] Length = 455 Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats. Identities = 137/506 (27%), Positives = 228/506 (45%), Gaps = 53/506 (10%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + YSVS+L+ ++ ++++ + + + EIS + SSGH Y +LKD+ +++ A Sbjct: 2 STQQNSAIYSVSKLNQTVRELLDTQMGRIWLTAEISNF-SQPSSGHWYLTLKDDRAQVRA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +T + YQ+IIES+ P+G G L E K+ Sbjct: 61 AMFRGQNTRVTFRPQNGQQVLVRATVTLYEPRGDYQLIIESMQPAGEGLLQQRFELLKQT 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L +GLF HK +P K + +ITS TGA + DIL + R P L V+I+P VQGD Sbjct: 121 LNAQGLFDVIHKQALPSPAKRVGIITSATGAALHDILNILHRRDPSLPVVIYPTAVQGDL 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +IA AI N E D++I+ RGGGS+EDLW FN+E++ RAI NS +PIIS Sbjct: 181 APAQIARAIELANLRHE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFNSRLPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+ADY AD+RAPTP+ AAE+ + + L + + L + + + Sbjct: 235 AVGHETDVTIADYVADVRAPTPSAAAELVSRNQTEMLRQLKSGQQHLEMAMDYYLAAQQQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R + Sbjct: 295 RFARLQHRLQQQHPQLRLARQQN------------------------------------Q 318 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I RQ + Q + + R+Q + + H Sbjct: 319 ISALRQKLTNAINRQLQSSTFKFDKNQRRLMQNDLRPQLQRQQRQLQQTQYH-------- 370 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ +L+H + ++ +++ + TL RG++ + + + + ++ Sbjct: 371 -LQNMLTHLVTRYRQRFAVACSKMEAVSPLATLARGFSISETPEGTVLKKTSQVKLGQQL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 DG + V N + + + K Sbjct: 430 KTRLNDGWVESQVTNIQKVRTKKSTK 455 >gi|315127475|ref|YP_004069478.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas sp. SM9913] gi|315015989|gb|ADT69327.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas sp. SM9913] Length = 444 Score = 359 bits (922), Expect = 6e-97, Method: Composition-based stats. Identities = 141/488 (28%), Positives = 223/488 (45%), Gaps = 57/488 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ ++E + + + GEIS + +SGH YFSLKD+ ++I A +W+G Sbjct: 9 VYTVSRLNREIRALLEQGFASLVLTGEISNFIA-PASGHWYFSLKDDKAQIKAAMWRGNN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + P G + V +++ + YQ+I+E + P+G G L + K +L EGLF Sbjct: 68 RNQSYRPINGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQEFDALKMRLAAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 S +K P+P I VITSPTGA I+DIL + R P L V+I+P VQG E + Sbjct: 128 SSAYKKPLPQNINRIGVITSPTGAAIKDILTVLKRRAPQLEVVIYPAMVQGKEAHGHLIK 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N E D+IIL RGGGS+EDLW FN E + RAI SS+PI+SA+GHE D Sbjct: 188 QIELANLRNE------VDVIILGRGGGSLEDLWCFNHEQLARAIYQSSLPIVSAVGHEID 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T++DY AD+RA TP+ AAE+ P + L + + L RL N I K L Sbjct: 242 TTISDYVADVRAATPSAAAELVSPNTQELHNRVNQLINRLANAFKHDIADKRALAIQLQH 301 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + L+ RLD L L+ + ++++ R ++ R+ + Sbjct: 302 RLNLCHPRNQLNQKSQRLDELSIALQQAMRQRLYQQERVLANLTPRLMRQSPDKKLANAN 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + Q + + ++ + + + Sbjct: 362 HQLAQLHARLNQAM-------------------------QQQLQHANNTL---------- 386 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ L S + N L RGY+ + N + ++ ++ Sbjct: 387 ------------ALQASRLDSVSPLNVLARGYSITKAAQNKVVKSVEDVKVGDVLITELV 434 Query: 491 DGQANAIV 498 DGQ + V Sbjct: 435 DGQVISKV 442 >gi|293391919|ref|ZP_06636253.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952453|gb|EFE02572.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 444 Score = 359 bits (922), Expect = 6e-97, Method: Composition-based stats. Identities = 143/490 (29%), Positives = 229/490 (46%), Gaps = 53/490 (10%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ ++ ++E+ L V + GEIS + SGH Y SLKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNQSVRLMLENQLGQVWLTGEISNFT-QPVSGHWYLSLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P G++ LV ++ + YQ+IIES+ +G G L+ E K KL Sbjct: 60 RMKNLRVGFRPTNGMQVLVRASVSLYEPRGDYQLIIESMHLAGEGLLMQQFEALKLKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ HK +P + + +ITS TGA ++DIL + R P L+VII+P VQG + Sbjct: 120 EGLFAQNHKKNLPHFSQAVGIITSKTGAALQDILHILQRRDPSLKVIIYPTAVQGKDAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I N +E D++I+ RGGGS+EDLW FN+E++ RAI +S+IPIISA+G Sbjct: 180 EIAQMIEIANRRQE------VDVLIVGRGGGSLEDLWCFNEEIVARAIFHSAIPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ + L L + R+ + R+ K L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRDQTELLQQLQYRQQRIEIALDRIFIEKKRQLQ 293 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L L N + +I + L H+ QK Sbjct: 294 HLFLRLQNQHPQAQLRIQ-------------QQLIAQLRHRLQQ--------SLCHHRQK 332 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 +++ + + ++ + +L R+ Sbjct: 333 TAENLTALSARL------------------------YKNPLPLKLQQQKQLLAQLKVRLN 368 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ K+ ++ L S + L RGY+ Q+ +N IT + +I Sbjct: 369 SEMNLKVGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNQHNQAITSIHAVEIGEQIQTR 428 Query: 489 FFDGQANAIV 498 DG + + Sbjct: 429 VADGIIISQI 438 >gi|218289632|ref|ZP_03493852.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus acidocaldarius LAA1] gi|218240282|gb|EED07465.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus acidocaldarius LAA1] Length = 469 Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats. Identities = 158/506 (31%), Positives = 241/506 (47%), Gaps = 59/506 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58 MN ++ + +V+EL+ +K +ES+ L V GEIS ++ SGH YF+LK Sbjct: 1 MNALTRAAAEAEAVLTVTELNRRIKERLESDPRLIQCRVVGEISNFKHHP-SGHMYFTLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D SRI A+++ +++F PE+G+ + G + F +YQ+ +E L P G G L Sbjct: 60 DETSRIRAVMFSSRNRRLQFQPEDGMRVIAFGSVGVFERDGQYQLYVEDLEPDGLGALFV 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIF 177 E+ + KL EEGLF+ + K P+P P + V+TSPTGAVIRDI I R+PL RVI+ Sbjct: 120 RFEQLRHKLAEEGLFAQERKRPLPRFPLRVGVVTSPTGAVIRDICTTIERRYPLARVILA 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P +VQG + I A+ L L PR D+II+ RGGGS+E+LW FN+EM+VRA+A Sbjct: 180 PAQVQGPDAAPTIVRALEVLYAL-----EPRVDVIIVGRGGGSLEELWPFNEEMVVRAVA 234 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S +P++SA+GHETD TL D+AAD+RA TPT AAE+ P + L++ L AR + Sbjct: 235 RSPVPVVSAVGHETDVTLCDFAADVRAATPTAAAELVCPHQAELRAYLEQASARARKAAL 294 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L L L + + ++ R +D + + I + R + Sbjct: 295 VKVAWGRERLLDLAGRPVLRDPTRIIAVRRQLVDYIETRVREAQRRPIGLRRRALADLER 354 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R++ L IQ R+ ++ + + + Sbjct: 355 RLQRVQLGGAIQGRRRDLMRLEHQLRSLT------------------------------- 383 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FIT 474 ++ + L++ L+RGY I D + IT Sbjct: 384 ----------------ERQLLVQSRKLEGVIGKLEALNPLAVLRRGYGVILDEDGRSVIT 427 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++LA RI I DG A V Sbjct: 428 SAQSLAPGKRIGIRMHDGTVEAEVKG 453 >gi|146293743|ref|YP_001184167.1| exodeoxyribonuclease VII large subunit [Shewanella putrefaciens CN-32] gi|145565433|gb|ABP76368.1| Exodeoxyribonuclease VII large subunit [Shewanella putrefaciens CN-32] Length = 466 Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 223/498 (44%), Gaps = 57/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD++S+I + Sbjct: 21 GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHYSQIRCAM 79 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++PSG G L + K KL Sbjct: 80 FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPSGDGLLAQQFDALKMKLA 139 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ Sbjct: 140 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAD 199 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI N E D+++L RGGGS+EDLW FN E + I NS++PI+SA+ Sbjct: 200 LSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAV 253 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ E+ L + +RL + + L Sbjct: 254 GHEVDTTISDYVADIRAPTPSAGAELLSQDSENKAQRLATVLSRLQQSVRHYQLKQERRL 313 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L +TL R D + LE L + R + +R++ H Sbjct: 314 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHLLSRRQQLLASRLEQQSPKHK 373 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ ++ Sbjct: 374 LAIEGNRLSYLASRLQDALQD--------------------------------------- 394 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 K+ + L++ + TL RGY+ D +N I +A + Sbjct: 395 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVIDSVDKVAIGDDL 446 Query: 486 LINFFDGQANAIVINKAP 503 GQ + V P Sbjct: 447 QTRLRYGQVISTVTQIKP 464 >gi|217972558|ref|YP_002357309.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS223] gi|254783708|sp|B8E9T2|EX7L_SHEB2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|217497693|gb|ACK45886.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS223] Length = 448 Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats. Identities = 142/498 (28%), Positives = 218/498 (43%), Gaps = 57/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD+ S+I + Sbjct: 3 GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++P+G G L + K KL Sbjct: 62 FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K +P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ Sbjct: 122 AEGLFAADTKRRLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+ Sbjct: 182 QSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ ++ L +RL + L Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRL 295 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L +TL R D + LE L + R + +R++ H Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ Sbjct: 356 LAIEGNRLSYLASRLQDA------------------------------------------ 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L K+ + L++ + TL RGY+ D +N + L + Sbjct: 374 -----LQDKLSQSEQRIKYVAHQLETVSPLATLSRGYSITTDIHNQVVDSTDKLTIGDSL 428 Query: 486 LINFFDGQANAIVINKAP 503 GQ + V P Sbjct: 429 QTRLRHGQVISTVTQIKP 446 >gi|254480273|ref|ZP_05093521.1| exodeoxyribonuclease VII, large subunit [marine gamma proteobacterium HTCC2148] gi|214039835|gb|EEB80494.1| exodeoxyribonuclease VII, large subunit [marine gamma proteobacterium HTCC2148] Length = 438 Score = 359 bits (921), Expect = 7e-97, Method: Composition-based stats. Identities = 149/486 (30%), Positives = 239/486 (49%), Gaps = 50/486 (10%) Query: 21 SYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLP 80 + + ++ES+ V V GE+S + SSGH YFSLKD ++++ ++KG ++ F P Sbjct: 2 NRQARSLLESHFDFVWVEGEVSNFVV-PSSGHWYFSLKDGNAQVRCAMFKGRNQRLRFTP 60 Query: 81 EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNP 140 G + +++ + G ++Q+++E + +G+G L A E+ K KLL EGLF + K P Sbjct: 61 GNGDHIRMRCRVSLYEGRGEFQLLVEHMEQAGAGALQAAFEQLKAKLLAEGLFQPERKKP 120 Query: 141 IPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNT 199 +P + VITSPTGA I DIL + R P + V I PV VQG+ EIA AI + N Sbjct: 121 LPESVSHLGVITSPTGAAIHDILTVLKRRCPAIEVSILPVAVQGEGAAGEIAEAINRANR 180 Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259 +E + D +I+ RGGGS+EDLW FN+E++ RAIA+S++PI+SA+GHE D+++AD A Sbjct: 181 WQEAGEI-QLDALIVGRGGGSLEDLWAFNEEIVARAIADSALPIVSAVGHEVDFSIADMA 239 Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 AD RA TP+ AAE+ P + L LEA L +I R I L+ L L + Sbjct: 240 ADQRAATPSAAAELLSPDQREQMERLAKLEAELVRLIRRKIADAQTRLDHLRARLKHPGA 299 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 L RLD L + L + ++ RK + +R+++ + I + R+ + QQ Sbjct: 300 QLREQSQRLDDLEQRLILAQKNLLSRKKSELALLESRLQAHSPLPRIVQMRKELGNLQQR 359 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 +E + + ++ +R Sbjct: 360 MEAAM--------------------------------QSKLQDSKSR------------- 374 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 ++ ++L S + +TL RGY + DTN +T + T++ G+ V Sbjct: 375 --LAHLAQMLDSLSPLSTLARGYAIVTDTNGKVLTDASEVEVGTQLETRLATGRLGVTVD 432 Query: 500 NKAPPK 505 + Sbjct: 433 RIEAEE 438 >gi|194098816|ref|YP_002001879.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae NCCP11945] gi|239999106|ref|ZP_04719030.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae 35/02] gi|240013986|ref|ZP_04720899.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae DGI18] gi|240016428|ref|ZP_04722968.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA6140] gi|240080547|ref|ZP_04725090.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA19] gi|240113083|ref|ZP_04727573.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae MS11] gi|240115839|ref|ZP_04729901.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae PID18] gi|240118137|ref|ZP_04732199.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae PID1] gi|240121553|ref|ZP_04734515.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae PID24-1] gi|240123686|ref|ZP_04736642.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae PID332] gi|240125876|ref|ZP_04738762.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae SK-92-679] gi|260440345|ref|ZP_05794161.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae DGI2] gi|291043639|ref|ZP_06569355.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae DGI2] gi|293398944|ref|ZP_06643109.1| exodeoxyribonuclease VII, large subunit [Neisseria gonorrhoeae F62] gi|193934106|gb|ACF29930.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae NCCP11945] gi|291012102|gb|EFE04091.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae DGI2] gi|291610358|gb|EFF39468.1| exodeoxyribonuclease VII, large subunit [Neisseria gonorrhoeae F62] gi|317164397|gb|ADV07938.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae TCDC-NG08107] Length = 469 Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSGFQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDL FN+E +VRAI +IP++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L+ + RL ++ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ + Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 376 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I L T + +R+ Sbjct: 377 ---------------------------------------DIVRLQTALPAAFSRL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 393 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|9931345|gb|AAG02155.1|AF212041_11 XseA [Zymomonas mobilis subsp. mobilis ZM4] Length = 544 Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats. Identities = 182/546 (33%), Positives = 295/546 (54%), Gaps = 38/546 (6%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + +SVSE+S LK VE SH+ VRGEISG+ S H Y +LKD+ + Sbjct: 13 AKSDATDNVRAFSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSRHCYLALKDDKAV 71 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 +D++IW+G +++I F PE G+E + G++TT+ G S+YQ++IE L +G G L+ L++R Sbjct: 72 LDSVIWRGVVSRISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRR 131 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 ++ L EEGLF+ K +PF+PKII V++SP+GAVIRDIL R++ R P VI++PV VQG Sbjct: 132 RRMLAEEGLFNADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQG 191 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D+ ++A A+ + LK G PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+ Sbjct: 192 DQAAAKVAAAVRGFSALKAGDAIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPV 251 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TL DYAADLRAPTPT AAE+AVPV+ L + L NL R+NN I R K Sbjct: 252 ISAVGHETDTTLCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLS 311 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L ++ + LP+ ++ L+ D +LE ++ + N ++ L Sbjct: 312 EERLEAVRRRLPDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLQ 371 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + + + + R + E+++ + L++ + R+ + K L Sbjct: 372 ARIAREQARLSACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFL 425 Query: 424 ITRIE----------------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 +++ +++ ++ ++ R+ + L +G Sbjct: 426 AEKLQPLLLEQRWQQKAELLAAYSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKG 485 Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521 Y ++D++++ ++ + T R+ + F DG T + + Sbjct: 486 YARVEDSHSHVVSNAHDAKTHKRLNLIFHDGSVWV---------APETPPKSRKADNPPE 536 Query: 522 QGTQGE 527 Q Sbjct: 537 PPEQTS 542 >gi|240128387|ref|ZP_04741048.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae SK-93-1035] Length = 469 Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSEFQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDL FN+E +VRAI +IP++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L+ + RL ++ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ + Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 376 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I L T + +R+ Sbjct: 377 ---------------------------------------DIVRLQTALPAAFSRL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 393 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|119505206|ref|ZP_01627281.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2080] gi|119458897|gb|EAW39997.1| Exodeoxyribonuclease VII [marine gamma proteobacterium HTCC2080] Length = 458 Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats. Identities = 144/492 (29%), Positives = 243/492 (49%), Gaps = 50/492 (10%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVSEL+ K ++E + + V V GEIS + SSGH YF+LKD+ S++ +++ K Sbjct: 12 SVSELTQRAKSLLEGHFARVDVEGEISDFTA-ASSGHWYFTLKDSESQVRCAMFRSANAK 70 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + +++ + ++Q+I + + P+G G L A EK K KL EEGLF Sbjct: 71 LRFKPSRGDRVQIRARVSLYTNRGEFQLIAQHIQPAGDGALQQAFEKLKTKLFEEGLFGV 130 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194 K P+P + I VITS +GA + DIL + R P+ + +FPV VQG + P + A+ Sbjct: 131 DRKQPVPNSARRIGVITSASGAALHDILAVLERRSPMTEIFLFPVPVQGTDAPGALVRAV 190 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 Q N L + T P D++I+ RGGGS EDLW FNDE + RAIANS +P +SA+GHE D++ Sbjct: 191 DQANALHQQHTLP-LDVLIIGRGGGSAEDLWAFNDETLARAIANSDLPTVSAVGHEVDFS 249 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D+ AD RA TP+ AAE+ + L + + L +++R +K + L L Sbjct: 250 ISDFVADQRAATPSAAAELVSLDQSEWSQRLDDAQRILQGLMVRRLKQERAVLGHWRARL 309 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + TL R LD ++L +++ + + ++ +++S +I+ + + Sbjct: 310 RHPGTTLKQQRQLLDSRIQQLALSMQNRLKFQRSTLTNLAKQVESRHPGRSIEHHASLLA 369 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 ++++ ++Q+V+ +R Sbjct: 370 QRKRELQQLVQGSMRR----------------------------------------FRTT 389 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 + +L+S +NTL RGY + + I ++ K+ + I +G+ Sbjct: 390 LAQHEQ-------LLRSLGPENTLARGYALVTGPDGQIIRNAKDAPAKSELRIRLAEGEL 442 Query: 495 NAIVINKAPPKE 506 A VI+ PK+ Sbjct: 443 AAEVIDVDTPKD 454 >gi|254805156|ref|YP_003083377.1| exodeoxyribonuclease large subunit [Neisseria meningitidis alpha14] gi|254668698|emb|CBA06451.1| exodeoxyribonuclease large subunit [Neisseria meningitidis alpha14] Length = 469 Score = 359 bits (920), Expect = 9e-97, Method: Composition-based stats. Identities = 134/490 (27%), Positives = 236/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTG+AE+ P ++ L ++ RL ++ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGSAELVSPNRQESLHRLAQVQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F +K ++ K+ Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALKHCRPDVSVYKH--- 376 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I T + ++ Sbjct: 377 ---------------------------------------NIDRFQTALSHAFHQL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|15602033|ref|NP_245105.1| exodeoxyribonuclease VII large subunit [Pasteurella multocida subsp. multocida str. Pm70] gi|14194719|sp|Q9CP86|EX7L_PASMU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|12720387|gb|AAK02252.1| XseA [Pasteurella multocida subsp. multocida str. Pm70] Length = 445 Score = 359 bits (920), Expect = 9e-97, Method: Composition-based stats. Identities = 148/497 (29%), Positives = 244/497 (49%), Gaps = 57/497 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ ++ ++E+ L V + GEIS + SGH Y +LKD ++++ ++ Sbjct: 1 MSEHIYSVSQLNQTVRVMLENQLRQVWLTGEISNFT-QPVSGHWYLTLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+IIES+ P+G G L E K +L Sbjct: 60 RMKNMRVSFRPQNGMQVLVHASVSLYEPRGDYQLIIESMHPAGEGLLQQQFEALKMQLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ K +P K + ++TS TGA ++DILQ + R P L+V+I+P VQG E Sbjct: 120 EGLFAQHLKKSLPPFCKSVGIVTSQTGAALQDILQILRRRDPSLQVVIYPTAVQGKEASA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D +I+ RGGGS+EDLW FN+EM+ RAI +S +PIISA+G Sbjct: 180 EIVQMIELANRRQE------VDALIVGRGGGSLEDLWCFNEEMVARAIFHSQLPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L+ RL + RL K K + L Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRDQQALLQQLVYQRQRLEMALDRLFKQKDDRLQ 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + + LS + + +L L+ +++ ++ +K + R++ + L + Sbjct: 294 RLRLRLHNQHPQRQLSAQKQLMQQLAHRLDWSMQAVLQQKQAQLRVLWARVEKNPLPFTL 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 QK +Q + + + + Sbjct: 354 QKQKQDLAQLKVRL---------------------------------------------- 367 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + L ++ H + L S + RGY+ Q+ ITQ + ++ R++ Sbjct: 368 -DVALKRELTFKHHQFAALCTKLDSISPLKVFARGYSIAQNAQGVAITQLKQVSVGERVI 426 Query: 487 INFFDGQANAIVINKAP 503 DG+ + V + P Sbjct: 427 TRLADGEIVSQVTDLRP 443 >gi|123441425|ref|YP_001005412.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica subsp. enterocolitica 8081] gi|158512674|sp|A1JKT0|EX7L_YERE8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|122088386|emb|CAL11177.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 458 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 147/511 (28%), Positives = 232/511 (45%), Gaps = 57/511 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ Sbjct: 2 SQSSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ T + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K + VITS +GA + D+LQ + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGAD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L L +R + +L R LE + + I R R + R+ Sbjct: 295 QLTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRRLSRRTERLQQRLVQAQPQ 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + Q + +++ + Q Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L ++ I L++ + TL RGY+ Q + + + + T Sbjct: 374 ------ALERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGSLLKTTKQVHTGD 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514 ++ DG + + K+ +K Sbjct: 428 KLTTRLQDGWVESEITQIKVAKKPRQRKAAN 458 >gi|254670543|emb|CBA06374.1| exodeoxyribonuclease large subunit [Neisseria meningitidis alpha153] Length = 469 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 133/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAGSEFQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ + Sbjct: 320 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISVYRQ--- 376 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I T + ++ Sbjct: 377 ---------------------------------------DIDRFQTTLSHAFHQL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|238763557|ref|ZP_04624518.1| Exodeoxyribonuclease 7 large subunit [Yersinia kristensenii ATCC 33638] gi|238698189|gb|EEP90945.1| Exodeoxyribonuclease 7 large subunit [Yersinia kristensenii ATCC 33638] Length = 458 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 140/508 (27%), Positives = 226/508 (44%), Gaps = 57/508 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ Sbjct: 2 SQTSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ + + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK +P K + VITS +GA + D+L + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQSHKQSLPSPAKQVGVITSSSGAALHDVLHVLQRRDPSLPVIIYPTAVQGAD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIHLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELIRQIQGQQQRMEMAMDYYLAQRSQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R + +L R LE + + I R + R+ Sbjct: 295 QFTHLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRSLGRRTERLQQRLIQVQPQ 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + Q + +++ + Q Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ I L++ + TL RGY+ Q + + + T Sbjct: 374 ------AFERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGTLLKTTKQVHTGD 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511 ++ DG + + K+ +K Sbjct: 428 KLTTRLQDGWVESEITQINVAKKPRQRK 455 >gi|261868140|ref|YP_003256062.1| exodeoxyribonuclease VII large subunit [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413472|gb|ACX82843.1| exodeoxyribonuclease VII, large subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 444 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 142/490 (28%), Positives = 228/490 (46%), Gaps = 53/490 (10%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSVS+L+ ++ ++E+ L V + GEIS + SGH Y SLKD ++++ ++ Sbjct: 1 MSDNIYSVSQLNQSVRLMLENQLGQVWLTGEISNFT-QPVSGHWYLSLKDENAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P G++ LV ++ + YQ+IIES+ +G G L+ E K KL Sbjct: 60 RMKNLRVGFRPSNGMQVLVRASVSLYEPRGDYQLIIESMHLAGEGLLMQQFEALKLKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ HK +P + + +ITS TGA ++DIL + R P L+VII+P VQG + Sbjct: 120 EGLFAQNHKKNLPHFSQAVGIITSKTGAALQDILHILQRRDPSLKVIIYPTAVQGKDAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I N +E D++I+ RGGGS+EDLW FN+E++ RA+ +S IPIISA+G Sbjct: 180 EIAQMIEIANRRQEA------DVLIVGRGGGSLEDLWCFNEEIVARAMFHSVIPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ + L L + R+ + R+ K L Sbjct: 234 HETDITIADFVADLRAPTPSAAAELVSRDQTELLQQLQYRQQRIEIALDRIFIEKKRQLQ 293 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L L N + +I + L H+ QK Sbjct: 294 HLFLRLQNQHPQAQLRIQ-------------QQLIAQLRHRLQQ--------SLCHHRQK 332 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 +++ + + ++ + +L R+ Sbjct: 333 TAENLTALSARL------------------------YKNPLPLKLQQQKQLLAQLKVRLN 368 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ K+ ++ L S + L RGY+ Q+ +N IT + +I Sbjct: 369 SEMNLKVGLQQKQLAHLCGKLDSLSPLKVLARGYSITQNQHNQAITSIHAVNIGEQIQTR 428 Query: 489 FFDGQANAIV 498 DG + + Sbjct: 429 VADGIIISQI 438 >gi|148260334|ref|YP_001234461.1| exodeoxyribonuclease VII, large subunit [Acidiphilium cryptum JF-5] gi|326403524|ref|YP_004283606.1| exodeoxyribonuclease VII large subunit [Acidiphilium multivorum AIU301] gi|146402015|gb|ABQ30542.1| exodeoxyribonuclease VII, large subunit [Acidiphilium cryptum JF-5] gi|325050386|dbj|BAJ80724.1| exodeoxyribonuclease VII large subunit [Acidiphilium multivorum AIU301] Length = 462 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 173/509 (33%), Positives = 260/509 (51%), Gaps = 50/509 (9%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + + + PE +VSEL+ +K VE+ V VRGEI+ + +SGH Y +LKD Sbjct: 1 MSETTDTATGNLPELTVSELAGAVKRTVETAFGRVRVRGEITEMKTY-ASGHTYMALKDE 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I AIIW+G ++ PE G+E + G+ITT+P S+YQ+IIE L +G G LL + Sbjct: 60 GAKIRAIIWRGNAARLGLKPENGVEVIATGRITTYPERSEYQLIIERLDYAGEGALLARI 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EK + +L EEGLF K +P +P+I+ V++SP GAVI+DI I+ RFP R+I++PV Sbjct: 120 EKLRLRLTEEGLFDAARKRALPLLPRIVGVVSSPQGAVIQDIRTTIARRFPRRIILWPVA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ +IA AI L E PRPD++I+ARGGGS+EDL FNDE +VRA A+ Sbjct: 180 VQGEAAAAQIAAAIRGFGALPEAGEVPRPDVLIVARGGGSLEDLMAFNDEEVVRAAASCP 239 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IP+ISA+GHETD TL D+A+D RAPTPT AAE+AVP + L + L ARL + R+ Sbjct: 240 IPLISAVGHETDTTLIDFASDRRAPTPTAAAELAVPDRMALAADLAQSGARLTGALTRVT 299 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ ALP+ + +R RLD L L ++ K + R+ Sbjct: 300 QSVRLRLDRAAAALPDLPSMIGTARQRLDDRGERLALALPRLVAAKRAQAREVAARLV-- 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 H R I ++ +A+L + + Sbjct: 358 --------------------------HPREIIAARRHSLALLGQRLAAPAPGLLREN--- 388 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L++ +Y TL RG+ + + + +T +R+ Sbjct: 389 ------------------RLRLGALAARLEALSYHATLARGFVMVATPSGDPVTTRRDAG 430 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPT 509 +K ++++F DG P Q + Sbjct: 431 SKRHLVLHFGDGTLGVRPEADRAPPAQTS 459 >gi|110834713|ref|YP_693572.1| exodeoxyribonuclease VII large subunit [Alcanivorax borkumensis SK2] gi|122959393|sp|Q0VNE8|EX7L_ALCBS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|110647824|emb|CAL17300.1| Exodeoxyribonuclease VII, large subunit [Alcanivorax borkumensis SK2] Length = 448 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 230/498 (46%), Gaps = 56/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S S+S+L+ + ++ES+ + ++GE+S + +SGH YFSLKD ++I+ + Sbjct: 4 SSRAEPLSISQLNLDAQGLLESSFPLIWLQGELSNF-SRPASGHWYFSLKDTRAQINGAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ + F P+ G + LV KIT + +QI++E + P+G G L + K +L Sbjct: 63 FRNRNRLLNFAPQNGEQVLVRAKITLYVPRGNFQIVVEHMEPAGQGALKAQFDALKAQLQ 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ +HK +P P I VITSP+GA IRDILQ + R P + V+I+P VQG E P Sbjct: 123 SEGLFAQEHKRTLPAWPNQIGVITSPSGAAIRDILQVLQRRCPSIPVLIYPAAVQGAEAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 ++ A+ E D++IL RGGGS+EDLW FNDE + RA+AN IPI+SA+ Sbjct: 183 AQLRQALALAVARNE------CDVLILGRGGGSLEDLWAFNDEGLARAVANCPIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D L D+AADLRAPTP+ AAE+ P + L L RL ++ + ++ L Sbjct: 237 GHEVDTGLTDFAADLRAPTPSAAAELVSPDLSIVSQRLAGLHRRLRWVMAQELRTVQERL 296 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L + Q L S RLD L L+ ++ + R+ + Sbjct: 297 RHLSQRLRSPRQHLEQSSQRLDELQNRLQRQMQHRLTLLQGRLQPSQQRLARLSPQRLLV 356 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + +Q + + + Q + + L+ L+ Sbjct: 357 ERQQRLATLSKRLPQPILRQLQQQQLQL-------------------------------- 384 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + ++ L + + TL RGY+ N + L + Sbjct: 385 ---------------AGLSKRLHTASPLETLARGYSITF-KGNQAVRSVEQLQAGDTLTT 428 Query: 488 NFFDGQANAIVINKAPPK 505 DG+ A V + Sbjct: 429 RLADGEIIARVEHVQVSD 446 >gi|241758502|ref|ZP_04756621.1| exodeoxyribonuclease VII, large subunit [Neisseria flavescens SK114] gi|241321337|gb|EER57485.1| exodeoxyribonuclease VII, large subunit [Neisseria flavescens SK114] Length = 449 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 139/507 (27%), Positives = 239/507 (47%), Gaps = 62/507 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S+ SVSEL+ K ++E +L+ + + GE+S +SGH YFSLKD+ Sbjct: 1 MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ +EG V GKI+ + ++QI + + G G L A Sbjct: 55 RAQVRCAMFKGAAMRLAQPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L EG FS + K P+P PK I ++TS A +RD++ ++ R P + VI++P Sbjct: 115 ERLKAQLQAEGAFSAERKKPLPARPKCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +IA AI + E D++I+ RGGGSIEDLW FN+E +VRAI Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + + + Q L R + +L + L +++ + F +K Sbjct: 289 YFDASQKFDWLARQIRHPRQKLDEQRASISKLAQMLSYSMTQNLRTHTARFERQTQTLKH 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ KN + + R + ++ Sbjct: 349 CRPDVSVYKNNID------RFQTALSHSFRQLLFHRR----------------------- 379 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 S++ +L++ + ++ L+RG++ +++T I L Sbjct: 380 --------------------QSLTAQAALLEAISPQHILERGFSVVKNTRGQVIRNADML 419 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 ++ I F DG+ + V + E Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQGE 446 >gi|225076653|ref|ZP_03719852.1| hypothetical protein NEIFLAOT_01704 [Neisseria flavescens NRL30031/H210] gi|224952019|gb|EEG33228.1| hypothetical protein NEIFLAOT_01704 [Neisseria flavescens NRL30031/H210] Length = 449 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 139/507 (27%), Positives = 240/507 (47%), Gaps = 62/507 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S+ SVSEL+ K ++E +L+ + + GE+S +SGH YFSLKD+ Sbjct: 1 MSELFAPSSI-----SVSELNAIAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ +EG V GKI+ + ++QI + + G G L A Sbjct: 55 RAQVRCAMFKGAAMRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L EG F+ + K P+P P+ I ++TS A +RD++ ++ R P + VI++P Sbjct: 115 ERLKAQLQAEGAFASERKKPLPARPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +IA AI + E D++I+ RGGGSIEDLW FN+E +VRAI Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP +S +GHETD+TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + Sbjct: 229 AIPFVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L+ L + + + Q L R + +L + L +++ + F +K Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDEQRASISKLAQILSYSMTQNLRAHTTRFERQTQTLKH 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ KN H + + R + ++ Sbjct: 349 CRPDVSVYKNNIT------HFQTALSHSFRQLLAHRR----------------------- 379 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 S++ +L++ + ++ L+RG++ +++T I L Sbjct: 380 --------------------QSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADTL 419 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 ++ I F DG+ + V + E Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQGE 446 >gi|52080963|ref|YP_079754.1| exodeoxyribonuclease VII large subunit [Bacillus licheniformis ATCC 14580] gi|52786339|ref|YP_092168.1| exodeoxyribonuclease VII large subunit [Bacillus licheniformis ATCC 14580] gi|319645079|ref|ZP_07999312.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. BT1B_CT2] gi|81825261|sp|Q65HI9|EX7L_BACLD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|52004174|gb|AAU24116.1| Exonuclease VII, large subunit [Bacillus licheniformis ATCC 14580] gi|52348841|gb|AAU41475.1| YqiB [Bacillus licheniformis ATCC 14580] gi|317392888|gb|EFV73682.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. BT1B_CT2] Length = 449 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 147/491 (29%), Positives = 244/491 (49%), Gaps = 60/491 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+ L+ ++K V+ +L + ++GE+S + IHS GH YF+LKD+++RI ++++ Sbjct: 8 TVTALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHSRGHIYFTLKDDNARIQSVMFARQN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL +EGLF Sbjct: 67 RNLAFTPENGMKVLVRGGISVYEPSGSYQLYAKEIQPDGIGALHLAYEELKKKLSQEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +++K PIP P ++ V+TSPTGA +RD++ I R+P ++VI+ P VQG + I + Sbjct: 127 DEKYKKPIPAFPSVVGVVTSPTGAAVRDVITTIKRRYPLVKVIVLPTLVQGVNAGESIVS 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I + N D++I+ RGGGSIE+LW FN+E + RAI +S IPIISA+GHETD Sbjct: 187 SIEEANRR------DLCDVLIVGRGGGSIEELWAFNEEAVARAIFSSDIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ ADLRA TPTGAAE+AVP L L LEAR+ + + +K + + +L Sbjct: 241 FTISDFVADLRAATPTGAAELAVPNMLDLLERLKTLEARMTKSMQQDLKKRQERVKNLQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + D + + L + + RK + N +++ +++ R Sbjct: 301 SYAFRYPKRLYAQKEQEFDLIFDRFQKQLAMTVDRKKQKLNEQTYKLEMLHPEEQLKQAR 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + E+ +++ +K Sbjct: 361 KRHEEQTVRLKRNMKVQ------------------------------------------- 377 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +K H+ L + + ++RGY+ N I + K I + Sbjct: 378 ----LKQIHSQFQTVLGKLNALSPLQVMERGYSLTY-KENELIKSIEQVHEKDEIRVTLN 432 Query: 491 DGQANAIVINK 501 DG V+ K Sbjct: 433 DGTLTCEVLQK 443 >gi|318606731|emb|CBY28229.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica subsp. palearctica Y11] Length = 458 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 145/511 (28%), Positives = 231/511 (45%), Gaps = 57/511 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ Sbjct: 2 SQSSASSIFTVSRLNQAVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ T + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L+ EGLF HK P+P K + VITS +GA + D+LQ + R P L +II+P VQG + Sbjct: 121 LVAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPIIIYPTAVQGAD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R + +L R LE + + I R + R+ Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRLLSRRTERLQQRLVQAQPQ 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + Q + +++ + Q Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L ++ SI L++ + TL RGY+ Q + + + + T Sbjct: 374 ------ALERQLNGYRQRFSIACSQLEAVSPLATLARGYSVTQTPEGSLLKTTKQVHTGD 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514 ++ DG + + K +K Sbjct: 428 KLTTRLQDGWVESEITQIKVAKNPRQRKAAN 458 >gi|254672141|emb|CBA04917.1| exodeoxyribonuclease large subunit [Neisseria meningitidis alpha275] Length = 469 Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAGSEFQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F +K ++ K+ Sbjct: 320 QIRHPRQKLDEQRASISKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSVYKH--- 376 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I T + ++ Sbjct: 377 ---------------------------------------NIDRFQTALSHAFHQL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|149185202|ref|ZP_01863519.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. SD-21] gi|148831313|gb|EDL49747.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. SD-21] Length = 488 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 187/526 (35%), Positives = 265/526 (50%), Gaps = 53/526 (10%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 ++ + SVSE+S LK VE V +RGE+SG + +SGH Y +LKD + Sbjct: 15 AKRRPGDNAEPLSVSEISNILKRTVEDRFGFVRLRGELSGVK-RAASGHLYAALKDEKAV 73 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IDA++W+G ++ F PE+G+E + GK+TT+PG SKYQI++E + +G G LL LEK Sbjct: 74 IDAVMWRGNTQRLPFNPEDGLEVVASGKLTTYPGRSKYQIVVERMELAGEGALLALLEKT 133 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 + +L EGLF + K +PF+PK I V+TSPTGAVIRDIL R++ RFP RV+++PV VQG Sbjct: 134 RARLAAEGLFDEGRKRRLPFLPKTIGVVTSPTGAVIRDILHRLADRFPSRVVVWPVLVQG 193 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +++A A+ + L EG RPD++I+ARGGGSIEDLW FN+E +VRAIA SIP Sbjct: 194 QGAAEQVAGAVRGFSHLPEGHP-DRPDLVIVARGGGSIEDLWSFNEEQVVRAIAECSIPT 252 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TLADYAAD RAPTPT AAE+AVPV+ L ++L + EAR I+R ++ Sbjct: 253 ISAVGHETDTTLADYAADRRAPTPTAAAEIAVPVRAELAATLADFEARTKRAILRPVQLG 312 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + LP++ L LD L L L + Sbjct: 313 RERLEARADRLPSAQTLLQPQGQALDDLAEALRRGLMDRTGKAREALAR----------- 361 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + L+ I E K K+ L + + + + L Sbjct: 362 -----------------HRFSPGTLKGIVREGKNKLDGLRLPPSLLTRPLGEKRSQLDAL 404 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ L RGY + + +T + A + Sbjct: 405 ----------------ARLASQ------LHPDRPLSRGYVRVTTSGGRTLTDRAEAAKEA 442 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + + F DG A+ A P PT + K+ Q +LF Sbjct: 443 ALTLKFRDGDL-AVSTGDAAPPSWPTPPKKRAAPKKRTPSAQDDLF 487 >gi|218768380|ref|YP_002342892.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis Z2491] gi|14194726|sp|Q9JTY8|EX7L_NEIMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|121052388|emb|CAM08720.1| exonuclease VII large subunit [Neisseria meningitidis Z2491] gi|319410626|emb|CBY90995.1| exodeoxyribonuclease VII large subunit (exonuclease VII large subunit) [Neisseria meningitidis WUE 2594] gi|325198507|gb|ADY93963.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis G2136] Length = 451 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 237/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K ++E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPTRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 KN I L T + +++ Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|85709867|ref|ZP_01040932.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. NAP1] gi|85688577|gb|EAQ28581.1| exodeoxyribonuclease VII large subunit [Erythrobacter sp. NAP1] Length = 494 Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 180/525 (34%), Positives = 272/525 (51%), Gaps = 50/525 (9%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + S++E+S LK VE +V +RGE+SG + +SGH Y +LKD+ + +D Sbjct: 18 SRAGDNAEPLSITEISQALKRTVEERFGYVRLRGELSGVK-RAASGHMYLALKDDKAVLD 76 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++W+G ++ F+PE+GIE + GK+TT+PG SKYQI+I+SL +G G LL LEK + Sbjct: 77 GVMWRGNAGRLAFVPEDGIEVIATGKLTTYPGRSKYQIVIDSLEIAGEGALLALLEKTRL 136 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDE 185 +L EGLF+ + K +PF+P+ I V+TSPTG+VIRDIL R++ RFP VI++PV VQG Sbjct: 137 RLEAEGLFARERKRRLPFLPRTIGVVTSPTGSVIRDILHRLADRFPSHVIVWPVLVQGQG 196 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +++A+AI + L + RPD++I+ARGGGSIEDLW FN+E++VRAIA +IP+IS Sbjct: 197 AAEQVADAIRGFSELSQDDAVRRPDVVIVARGGGSIEDLWSFNEEIVVRAIAECTIPVIS 256 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TLADYAAD RAPTPT AAEMAVPV+ LQ++L + AR + R ++ Sbjct: 257 AVGHETDTTLADYAADRRAPTPTAAAEMAVPVRADLQATLADFAARQRRAVHRPVELGRE 316 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + + +P + L RLD L L L + +R+ L Sbjct: 317 RLEARTRRMPRIEVLLQPQAQRLDDLAERLRRGLTDRAAHGRQQLAGTASRLAPRLLEGA 376 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + R+ + + + + + I +K Sbjct: 377 LSGRRERLDRTR--------------------------LSPQLVERPILTAQERLKA--- 407 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ L K L+RGY ++ +T A + + Sbjct: 408 ----------------LARLASQLH---PKKPLERGYAIVRSETGEVVTSSAEAAKRAVL 448 Query: 486 LINFFDGQANAIVINK-APPKEQPTKKCQLHNNKREKQGTQGELF 529 ++ F DG+ + V + PP +P Q +LF Sbjct: 449 ILEFSDGKLDVGVGDTPPPPPARPAPAPAKKRRAPAPNPKQDDLF 493 >gi|56420930|ref|YP_148248.1| exodeoxyribonuclease VII large subunit [Geobacillus kaustophilus HTA426] gi|81832353|sp|Q75TC0|EX7L_GEOKA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|47076818|dbj|BAD18358.1| exodeoxyribonuclease VII large subunit [Geobacillus kaustophilus] gi|56380772|dbj|BAD76680.1| exodeoxyribonuclease VII large subunit [Geobacillus kaustophilus HTA426] Length = 448 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 236/498 (47%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V L+ ++K V+ +L + V+GEIS ++ HS GH YF+LKD+ RI A+ Sbjct: 1 MEVKYVTVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQGRIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F PE+G+ L G+I+ + + YQ+ ++ + P G G+L A E+ K++L Sbjct: 60 MFAGYNQHLPFRPEDGMNVLARGEISVYEPNGNYQLYVKEMQPEGVGSLYLAYEQLKQRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS HK P+P P+ I V+TSPTGA +RDI+ I R+PL +VI+FP VQGD Sbjct: 120 EAEGLFSPVHKKPLPAFPRCIGVVTSPTGAAVRDIMTTIRRRYPLAKVILFPALVQGDGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI + N+ D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA Sbjct: 180 APSIVRAIERANSF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKI 304 +GHETD+T+AD+ ADLRAPTPT AAEMA P L L + RL + + Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAEMAAPHVGELAERLAERKWRLIRAMKEQLAADKEQ 293 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 A + +LD L L E ++ + + + + R+ Sbjct: 294 LRRLQGSYAFRYPKRLYEQKEQQLDALLERLSRQRERLVDKHRQRLHELDMRLWRHHPAA 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ ++ +E+ ++ + + +A Sbjct: 354 ELERMKERQKAAANALEKAMRTAVERHRFRFRSNLA------------------------ 389 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L++ + ++RGY+ + + + + L Sbjct: 390 -----------------------RLEALSPLRIMERGYSLVYNEQGELVKRTNQLRIGEH 426 Query: 485 ILINFFDGQANAIVINKA 502 + I DG+ + V Sbjct: 427 LSIQVQDGRVDCQVTGVE 444 >gi|312962896|ref|ZP_07777383.1| Exodeoxyribonuclease 7 large subunit [Pseudomonas fluorescens WH6] gi|311282923|gb|EFQ61517.1| Exodeoxyribonuclease 7 large subunit [Pseudomonas fluorescens WH6] Length = 459 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 141/500 (28%), Positives = 234/500 (46%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E +++ V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFTNIWVEGEISNL-ARPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ ++G+ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 182 VQGREAIPQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P HL + NL RL ++ + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + + + R+ Sbjct: 295 SHSRLRLEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ L+ L+ + Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAMREGLKARRLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D I Sbjct: 391 -----------------------SQVQTLQVVSPLATLGRGYSILLDERGQAIRNAAQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +GQ V + Sbjct: 428 TGQRLTARLGEGQLQVRVED 447 >gi|294637672|ref|ZP_06715951.1| exodeoxyribonuclease VII, large subunit [Edwardsiella tarda ATCC 23685] gi|291089227|gb|EFE21788.1| exodeoxyribonuclease VII, large subunit [Edwardsiella tarda ATCC 23685] Length = 461 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 135/503 (26%), Positives = 232/503 (46%), Gaps = 57/503 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ +++ +++ + Sbjct: 9 IFTVSRLNQTVRQLLELEMGQIWLSAEISNF-SQPASGHWYFTLKDDKAQVRCAMFRNSN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P+ G + LV IT + YQ+I ES+ P+G G L + K++L EGLF Sbjct: 68 RRVTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDALKQRLQAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +HK P+P + + VITS +GA + D+L + R P L V+I+P VQG E P ++ Sbjct: 128 DIRHKQPLPQPARCVGVITSASGAALHDVLHVLRRRDPALPVVIYPSAVQGAEAPAQLVG 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHETD Sbjct: 188 AIERANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 ++AD+ ADLRAPTP+ AAE+ ++ L L++ RL + + + L L Sbjct: 242 VSIADFVADLRAPTPSAAAEVVSRNRDELLRRLLSQRQRLEMALDYALARQRQRLQQLHH 301 Query: 313 ALPNSDQTLSCSRYRLDR--LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L +R + L R L ++ + + R + H R+ H+++ Sbjct: 302 RLAQQHPQLRLARQQAQLLVLRRRLAQAMDTRLRQAERRWRHGAERLAQHSPQHSLRNRA 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + Q +E +++ + Sbjct: 362 YQLQQLQHRLESQLQRRMAEQREC------------------------------------ 385 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + L+ + TL RG++ Q + + + ++ A + Sbjct: 386 -----------FATLCARLEGVSPLATLARGFSVTQCADGHVLRRRAQAAVGDVLRTRLE 434 Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513 DG + V P + ++ Sbjct: 435 DGWIESQVTGSVPLAPRRRRRKP 457 >gi|213971506|ref|ZP_03399617.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv. tomato T1] gi|213923698|gb|EEB57282.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv. tomato T1] Length = 462 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 236/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 7 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 64 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 65 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 124 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 125 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 184 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 185 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 237 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 238 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 297 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + +K H+ +R+ + Sbjct: 298 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 358 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 393 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 394 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 430 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 431 PGQRLTARLGEGELQVRVED 450 >gi|308389480|gb|ADO31800.1| exonuclease VII large subunit [Neisseria meningitidis alpha710] Length = 469 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +++ K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AEERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 373 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 KN I L T + +++ Sbjct: 374 ------------------------------------CKNNIVRLQTALPAAFSQL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ ++DT I L ++ I F DG Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|294084705|ref|YP_003551463.1| Exonuclease VII large subunit [Candidatus Puniceispirillum marinum IMCC1322] gi|292664278|gb|ADE39379.1| Exonuclease VII large subunit [Candidatus Puniceispirillum marinum IMCC1322] Length = 497 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 164/529 (31%), Positives = 249/529 (47%), Gaps = 54/529 (10%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + + P ++ ELS +K VE +V VR EIS SGH YF+LKD+ S + Sbjct: 19 AASAGDNAPYMTIGELSKRVKATVEGAFDYVRVRAEIS-RPTRAPSGHIYFTLKDDRSTL 77 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 A+ WK ++ PEEG+E + GK+TT+PG SKYQI++ + +G G +L LE+R+ Sbjct: 78 AAVCWKTVAGNLQVQPEEGLEVICSGKLTTYPGQSKYQIVVNQMEIAGEGAMLKMLEERR 137 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 + L EGLF K PIP +P I VITSPTGAVIRDIL R++ RF + V+++ VQG Sbjct: 138 RMLAAEGLFDADRKRPIPEMPTTIGVITSPTGAVIRDILHRLNARFGVHVLVWGTLVQGK 197 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++A AI + + PRPDI+I+ARGGG++EDLW FN+E +VRA+A+ S+P+I Sbjct: 198 NAAGQVAAAIRGFDAMPANGAIPRPDILIVARGGGALEDLWAFNEEEVVRAVADCSLPVI 257 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHETD TL D+ ADLRAPTPT AAE+AVPV L + + EARL I + ++ Sbjct: 258 SAIGHETDTTLIDFVADLRAPTPTAAAELAVPVHADLAAYISETEARLKRGISQRLETAN 317 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + + L + + ++ LD L LE + + + + R++ Sbjct: 318 QLVRMAARGLLDPAEMIARRGQMLDYALAGLNTALERALAARRLDLSGLAGRLRP--PET 375 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + H + Sbjct: 376 RLAEMSGHFTRLSDRLANRFG--------------------------------------- 396 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 I+ +V+ ++L + +++ L RG+ + D + + + Sbjct: 397 --------QMIERHEQAVNSAGKLLDAHSFERVLDRGFALVIDAEGTPLKRAIDAPQGAE 448 Query: 485 ILINFFDGQANAIVINKAPP----KEQPTKKCQLHNNKREKQGTQGELF 529 + + F D A++ K K K Q LF Sbjct: 449 VTLRFADASRQALLDPDGVDHVVHKPAKPAKKATAKPSATKDTKQDSLF 497 >gi|301386111|ref|ZP_07234529.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. tomato Max13] gi|302060189|ref|ZP_07251730.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. tomato K40] gi|302135132|ref|ZP_07261122.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 463 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 236/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 8 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 66 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 126 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 186 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + +K H+ +R+ + Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 394 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 395 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 432 PGQRLTARLGEGELQVRVED 451 >gi|261377500|ref|ZP_05982073.1| exodeoxyribonuclease VII, large subunit [Neisseria cinerea ATCC 14685] gi|269146234|gb|EEZ72652.1| exodeoxyribonuclease VII, large subunit [Neisseria cinerea ATCC 14685] Length = 451 Score = 358 bits (918), Expect = 2e-96, Method: Composition-based stats. Identities = 136/490 (27%), Positives = 236/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K ++E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 S + K P+P P+ I ++TS A +RD++ ++ R P + VI++P VQG +IA Sbjct: 128 SAERKKPLPARPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPTPVQGTGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI +IP++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACAIPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ + L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLNRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F +K ++ KN Sbjct: 302 QIRHPRQKLDEQRASISKLAQMLSYSMTQNLRAHTARFERQTQTLKHCRPDVSVYKNNID 361 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + R + ++ Sbjct: 362 ------RFQTALSHSFRQLLAHRR------------------------------------ 379 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 380 -------QSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVTKEQ 442 >gi|327481732|gb|AEA85042.1| exodeoxyribonuclease VII large subunit [Pseudomonas stutzeri DSM 4166] Length = 458 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 140/500 (28%), Positives = 227/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ +LD +VS+L+ + ++E + V V GEIS +SGH YF+LKD + Sbjct: 4 DPF-QRLNLDREVLTVSQLNGRARLLLEDVFAQVWVEGEISNL-ARPASGHVYFTLKDRN 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ +I +G+ V GK++ F G YQ+I++ L P+G G L A E Sbjct: 62 AQVRCALFRQNAARIRQALRDGLAVRVRGKVSLFEGRGDYQLILDMLEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K +P P+ I +++SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAAEGLFSAERKAALPAHPRRIGIVSSPTGAVIRDIISVFRRRAPQVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 182 VQGREATGQIVRALQLADAQ-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+ A+GHETD ++AD+ AD+RAPTP+ AAE+ P LQ L L+ RL + + Sbjct: 235 TPIVCAVGHETDVSIADFVADVRAPTPSAAAELLAPSSADLQQRLNGLQQRLVLRMRDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L+ L + L + + L R+D L + L L+ + + R+ + Sbjct: 295 HRDAMRLDGLTRRLRHPGERLQQQAQRIDDLEQRLLRALDRRLCSGQERLARLETRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + ++ +++ Sbjct: 355 HPGRTLNLLRQRLDHLSSRLPRAMQANIKGRRQ--------------------------- 387 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + L + TL RGY+ + D I Sbjct: 388 --------------------QLQGLAQTLNVVSPLATLSRGYSILLDDRGQAIRSASQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ DG+ + V + Sbjct: 428 PGQRLKARLGDGELDVRVED 447 >gi|268594943|ref|ZP_06129110.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae 35/02] gi|268596678|ref|ZP_06130845.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA19] gi|268548332|gb|EEZ43750.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae 35/02] gi|268550466|gb|EEZ45485.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA19] Length = 455 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 13 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 71 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 72 ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 131 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 132 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSGFQIAQ 191 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDL FN+E +VRAI +IP++S +GHETD Sbjct: 192 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 245 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L+ + RL ++ + L+ L + Sbjct: 246 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 305 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ + Sbjct: 306 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 362 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I L T + +R+ Sbjct: 363 ---------------------------------------DIVRLQTALPAAFSRL----- 378 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 379 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 436 Query: 493 QANAIVINKA 502 + + V + Sbjct: 437 ETDVRVSKEQ 446 >gi|53804093|ref|YP_114256.1| exodeoxyribonuclease VII, large subunit [Methylococcus capsulatus str. Bath] gi|53757854|gb|AAU92145.1| exodeoxyribonuclease VII, large subunit [Methylococcus capsulatus str. Bath] Length = 467 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 140/521 (26%), Positives = 220/521 (42%), Gaps = 58/521 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN S + Y+VS L+ + + S+ + V GE+S +SGH YF+LKD Sbjct: 1 MNLRSSPDGRPEFVYTVSRLNREARITLSSHFGTLWVEGEVSNL-AAPASGHLYFTLKDA 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + + F P G L ++ + YQ+I++ L +G G L A Sbjct: 60 EAQVRCAMFRSSGRLLGFKPTNGDHVLARAQVGLYEPRGDYQLIVDLLEEAGDGVLHRAF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E KK+L EGLF K PIP P I V+TSPTGA IRDIL ++ R+P VIIFP Sbjct: 120 EALKKRLDAEGLFDPARKKPIPRFPTCIGVVTSPTGAAIRDILTVLARRYPAASVIIFPA 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG E P E+ A+ Q + D+++LARGGGS+EDLW FNDE + RAI Sbjct: 180 KVQGSEAPAELIRALQQADASGW------CDVLLLARGGGSMEDLWAFNDESLGRAIVAC 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P+++ IGHE D+T+AD+AADLRAPTP+ AAE P + L L LE++L + Sbjct: 234 QTPVVTGIGHEVDFTIADFAADLRAPTPSAAAEAVTPDRIDLGVRLQRLESQLRRSFLGR 293 Query: 300 IKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ L+ + + L + Q L RL L L N + + + + R+ Sbjct: 294 LETVQQRLDFVERRLRQCHPKQRLGRQAQRLAELKHRLARNAAARLNLERQRLQGLELRL 353 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + + + + L + Sbjct: 354 VRHDPAQRVIHLTGKLDSLESRLRRSASLLLERRRERLQ--------------------- 392 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQK 476 + L + + TL RGY+ ++ ++ + Sbjct: 393 --------------------------ALGQRLDTVSPLATLARGYSIALRAADDAVVHSW 426 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 ++ + +G + V P Sbjct: 427 EDIQPGELLYTRLAEGSLISRVEKAEPGDPPVFPGQSPRGR 467 >gi|268686785|ref|ZP_06153647.1| exodeoxyribonuclease 7 large subunit [Neisseria gonorrhoeae SK-93-1035] gi|268627069|gb|EEZ59469.1| exodeoxyribonuclease 7 large subunit [Neisseria gonorrhoeae SK-93-1035] Length = 451 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSEFQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDL FN+E +VRAI +IP++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L+ + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ + Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 358 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I L T + +R+ Sbjct: 359 ---------------------------------------DIVRLQTALPAAFSRL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 375 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|304387318|ref|ZP_07369511.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis ATCC 13091] gi|304338701|gb|EFM04818.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis ATCC 13091] Length = 469 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ L +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 ARLAKLLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPTRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 260 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 320 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 373 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 KN I L T + +++ Sbjct: 374 ------------------------------------CKNNIVRLQTALPAAFSQL----- 392 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 393 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|239827669|ref|YP_002950293.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. WCH70] gi|239807962|gb|ACS25027.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. WCH70] Length = 453 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 157/488 (32%), Positives = 246/488 (50%), Gaps = 59/488 (12%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V L+ ++K E +L + ++GEIS ++ HS GH YF+LKD +RI A+++ G Sbjct: 8 TVGALTKYIKRKFEVDPHLRDLWIKGEISNFK-YHSRGHMYFTLKDEQARIQAVMFAGYN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE+G++ LV G+I+ + S YQI ++ + P G G L A E+ KK+L EGLF Sbjct: 67 QYLSFRPEDGMKVLVRGEISVYEPSGNYQIYVKEMQPEGIGNLYLAYEQLKKRLEAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 S +HK PIP P+ I V+TSPTGA IRDI+ I R+P+ VI+FP VQG++ + I Sbjct: 127 SPEHKKPIPAFPRYIGVVTSPTGAAIRDIMTTIRRRYPIATVILFPTLVQGEQAAESIVR 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I + N L D++I+ RGGGSIE+LW FN+E++ RAI S +PIISA+GHETD Sbjct: 187 SIEKANELGY------IDVLIVGRGGGSIEELWAFNEEIVARAIFASEVPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTPTGAAE+AVP L + + RL + I + + L L K Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHIAELMERISQRKLRLMRAMKEKIATESDRLLRLQK 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + ++ +LD L LE + E + +K + ++ + + + Sbjct: 301 SYAFRYPEKLYEQKEQQLDSLLERLERHTERLFDKKRERLEQLRLKLLRHHPNEQLSRMK 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + +E+ ++ H+ + L ++ LH L Sbjct: 361 EKHESLTKSLEKEMRSHIHHQQLRFTSLVSHLHAL------------------------- 395 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + ++RGY+ + + + R L I + Sbjct: 396 ----------------------SPLKIMERGYSLVYNEKKELVKSIRQLQLGDTIQVRLQ 433 Query: 491 DGQANAIV 498 DGQ + V Sbjct: 434 DGQIDCHV 441 >gi|167855633|ref|ZP_02478392.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis 29755] gi|167853260|gb|EDS24515.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis 29755] Length = 449 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 139/504 (27%), Positives = 241/504 (47%), Gaps = 59/504 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MNP + + + ++S+L+Y +K ++E V + GEIS + SGH Y +LKD Sbjct: 1 MNPLN--FIMKNHILTISQLNYSVKQMLEVEFGSVWLIGEISNF-SQPVSGHWYLTLKDE 57 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ ++ F P+ G++ LV ++ + YQ+IIE++ P+G G L Sbjct: 58 QAQVRCAMFRMKNMRVNFRPQNGMQVLVRANVSLYEPRGDYQVIIETMQPAGDGLLQQQF 117 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K KL GLF+ +HK PIP K + ++TS +GA ++DIL + R P L ++I+P Sbjct: 118 EQLKMKLAGLGLFAQEHKKPIPTFVKRVGIVTSSSGAALQDILHILQRRDPTLEIVIYPT 177 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E +I I N +E D++I+ RGGGS+EDLW FN+E + AI +S Sbjct: 178 LVQGKEATADIVQMIELANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAWAIYHS 231 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPIISA+GHETD T+AD+ ADLRAPTP+ AAE+ ++ L L + ++N RL Sbjct: 232 QIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQQELLRQLQHHADKVNLAFDRL 291 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 K+ + L L + + L +L L ++L+ +E ++ RK + + + + R+ Sbjct: 292 WSEKLARFDRLQLRLQAQHPQRQLQQRLQQLLHLEKQLKQQMEQLLLRKQQRWKNTLQRM 351 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + L + I QH+ + +Q + +++++ Sbjct: 352 ERNPLPYRISAQTQHLHKLEQRLSYAIEKNISQR-------------------------- 385 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 L + L RGY+ Q+ + + Sbjct: 386 ---------------------RQQFQTLCTQLDGLSPLAILARGYSVTQNQQGKALLSTQ 424 Query: 478 NLATKTRILINFFDGQANAIVINK 501 +++ I+ G + V+ Sbjct: 425 DISIGETIVTRLAQGNVVSQVVGI 448 >gi|59801082|ref|YP_207794.1| exodeoxyribonuclease VII large subunit [Neisseria gonorrhoeae FA 1090] gi|254493884|ref|ZP_05107055.1| exonuclease VII large subunit [Neisseria gonorrhoeae 1291] gi|268599170|ref|ZP_06133337.1| exonuclease VII large subunit [Neisseria gonorrhoeae MS11] gi|268601516|ref|ZP_06135683.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID18] gi|268603853|ref|ZP_06138020.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID1] gi|268682319|ref|ZP_06149181.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID332] gi|268684476|ref|ZP_06151338.1| exonuclease VII large subunit [Neisseria gonorrhoeae SK-92-679] gi|81311207|sp|Q5F8V5|EX7L_NEIG1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|59717977|gb|AAW89382.1| putative exonuclease VII large subunit [Neisseria gonorrhoeae FA 1090] gi|226512924|gb|EEH62269.1| exonuclease VII large subunit [Neisseria gonorrhoeae 1291] gi|268583301|gb|EEZ47977.1| exonuclease VII large subunit [Neisseria gonorrhoeae MS11] gi|268585647|gb|EEZ50323.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID18] gi|268587984|gb|EEZ52660.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID1] gi|268622603|gb|EEZ55003.1| exonuclease VII large subunit [Neisseria gonorrhoeae PID332] gi|268624760|gb|EEZ57160.1| exonuclease VII large subunit [Neisseria gonorrhoeae SK-92-679] Length = 451 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPAAVQGAGSGFQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDL FN+E +VRAI +IP++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLRAFNEEPVVRAIEACTIPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L+ + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ + Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRAHTARFERQTQALQHCRPDVSVYRQ--- 358 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I L T + +R+ Sbjct: 359 ---------------------------------------DIVRLQTALPAAFSRL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 375 --LARRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|332162629|ref|YP_004299206.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325666859|gb|ADZ43503.1| exodeoxyribonuclease VII large subunit [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330860293|emb|CBX70608.1| exodeoxyribonuclease 7 large subunit [Yersinia enterocolitica W22703] Length = 458 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 145/511 (28%), Positives = 231/511 (45%), Gaps = 57/511 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ Sbjct: 2 SQSSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ T + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++ Sbjct: 61 AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L+ EGLF HK P+P K + VITS +GA + D+LQ + R P L +II+P VQG + Sbjct: 121 LVAEGLFDQSHKQPLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPIIIYPTAVQGAD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRHQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R + +L R LE + + I R + R+ Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRLLSRRTERLQQRLVQAQPQ 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + Q + +++ + Q Sbjct: 355 GQIHRYNQRVQQQEYRLRQ----------------------------------------- 373 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L ++ SI L++ + TL RGY+ Q + + + + T Sbjct: 374 ------ALERQLNGYRQRFSIACSQLEAVSPLATLARGYSVTQTPEGSLLKTTKQVHTGD 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514 ++ DG + + K +K Sbjct: 428 KLTTRLQDGWVESEITQIKVAKNPRQRKAAN 458 >gi|319427117|gb|ADV55191.1| exodeoxyribonuclease VII, large subunit [Shewanella putrefaciens 200] Length = 448 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 145/498 (29%), Positives = 223/498 (44%), Gaps = 57/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+VS L+ ++ I+E L + + GEIS + +SGH Y +LKD++S+I + Sbjct: 3 GTKNNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PTSGHWYLTLKDHYSQIRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ++IES++P+G G L + K KL Sbjct: 62 FKGRNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ Sbjct: 122 AEGLFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAD 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI N E D+++L RGGGS+EDLW FN E + I NS++PI+SA+ Sbjct: 182 LSICQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPIVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ E+ L + +RL + + L Sbjct: 236 GHEVDTTISDYVADIRAPTPSAGAELLSQDSENKAQRLATVLSRLQQSVRHYQLKQERRL 295 Query: 308 NSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L +TL R D + LE L + R + +R++ H Sbjct: 296 SLLEHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHLLSRRQQLLASRLEQQSPKHK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ ++ Sbjct: 356 LAIEGTRLSYLASRLQDALQD--------------------------------------- 376 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 K+ + L++ + TL RGY+ D +N I LA + Sbjct: 377 --------KLSQSEQRIKYAAHQLETVSPLATLSRGYSITTDIHNQVIDSVDKLAIGDDL 428 Query: 486 LINFFDGQANAIVINKAP 503 GQ + V P Sbjct: 429 QTRLRYGQVISTVTQIKP 446 >gi|254448827|ref|ZP_05062283.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium HTCC5015] gi|198261517|gb|EDY85806.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium HTCC5015] Length = 452 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 149/501 (29%), Positives = 235/501 (46%), Gaps = 57/501 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 N +SV+ L+ +K ++E++L + V E+S + +SGH YF+LKD ++ Sbjct: 1 MISANPNARDIFSVTRLNREVKALLETHLGLIWVEAELSNF-SRPASGHWYFTLKDERAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++G + P+ G LV +++ + YQ+I+E + P+G G L E Sbjct: 60 VRCAMFRGRNRLLRQAPQHGDRLLVRARLSLYEARGDYQLIVEHMEPAGQGGLQQQYEAL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K KL EGLF+ K +P P+ I +ITS TGA +RDIL +S R P + ++PV VQ Sbjct: 120 KAKLEGEGLFASDGKQNLPPFPRRIGLITSETGAALRDILSVLSRRCPMVPARVYPVPVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E I NA+ + D++I+ARGGGS+EDLW FN+E +VRAIA S IP Sbjct: 180 GKESAPAIVNALERAQQR------NDCDVLIIARGGGSLEDLWPFNEETVVRAIAASRIP 233 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 IIS +GHETD TL+D+AADLRAPTP+ AAE AVP + L+ S+ + + N + R + Sbjct: 234 IISGVGHETDITLSDFAADLRAPTPSAAAEQAVPDQRALRLSVQSQRQTIENHVRRCLHS 293 Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 LN + + L + ++L + RLD L L + I + H R+++ Sbjct: 294 WRTELNHVARRLEQQHPRKSLEQHQQRLDDLTPRLHRAIAQRIAQHRVQLKHHQQRLQNQ 353 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + RQ + +Q + + + L+ + + Sbjct: 354 SPRRQLIEARQKLRRTEQQLHRNIADQLQRRRQQWR------------------------ 389 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + R L++ + TL RGY Q + I + Sbjct: 390 -----------------------LAARGLEAVSPLKTLDRGYAIAQRHSGQVIDDANGVT 426 Query: 481 TKTRILINFFDGQANAIVINK 501 +I I GQ +A V Sbjct: 427 AGEKIRIKLAKGQLDAEVETV 447 >gi|114562314|ref|YP_749827.1| exodeoxyribonuclease VII large subunit [Shewanella frigidimarina NCIMB 400] gi|122300413|sp|Q085S6|EX7L_SHEFN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|114333607|gb|ABI70989.1| Exodeoxyribonuclease VII large subunit [Shewanella frigidimarina NCIMB 400] Length = 450 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 229/500 (45%), Gaps = 58/500 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ + YSVS+L+ ++HI+E + + + GEIS + SSGH Y +LKD HS++ Sbjct: 6 SATKNNVYSVSQLNSEVRHILEGQIGKIWLNGEISNFSA-PSSGHWYLTLKDAHSQVRCA 64 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG + F P G + L+ G I+ + YQ+++ES++P+G G L E K KL Sbjct: 65 MFKGRNQSVRFKPVNGQQVLIKGAISVYEPRGDYQLLLESMLPAGDGLLAQEFEALKLKL 124 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ + K PIP + I VITS TGA +RDIL ++ R P + V+++P +VQG Sbjct: 125 AAEGLFALETKRPIPTNIQRIGVITSATGAALRDILHVLARRDPSIEVVVYPTQVQGATA 184 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I AI+ N E D+++L RGGGS+EDLW FN E + AI NS++P++SA Sbjct: 185 SQLICQAIVTANQRME------VDVLLLTRGGGSLEDLWCFNSEHLAHAIYNSALPVVSA 238 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D T++DY AD+RAPTP+ AE+ K + L L +RL + + Sbjct: 239 VGHEIDTTISDYVADVRAPTPSAGAELLSKDKGNKAEKLALLLSRLQQGMKHYQLQQYGR 298 Query: 307 LNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L L R D + LE+ L+ + R + NR++ ++ Sbjct: 299 LTQLSHQLQRHEPQHKLQQFEQRFDEIQMRLENALQHKLSRLTLRHQQLHNRLQQRSPVN 358 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q + + K + Sbjct: 359 TLTLEKQRLGYLIERFNDASKDY------------------------------------- 381 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 K + VS L + + TL RGY+ TN + I L+ Sbjct: 382 ----------FKQAESRVSQAAHNLDTVSPLATLSRGYSIT-STNEHVIENANQLSNGDV 430 Query: 485 ILINFFDGQANAIVINKAPP 504 I G + V + + Sbjct: 431 IHTRLKQGSVTSTVTDVSTK 450 >gi|330872868|gb|EGH07017.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 459 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKAALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + + H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHNRQVRLAHMESRLTAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLTARLGEGELQVRVED 447 >gi|260753163|ref|YP_003226056.1| exodeoxyribonuclease VII large subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552526|gb|ACV75472.1| exodeoxyribonuclease VII, large subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 524 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 183/535 (34%), Positives = 294/535 (54%), Gaps = 38/535 (7%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +SVSE+S LK VE SH+ VRGEISG+ SGH Y +LKD+ + +D++IW+G ++ Sbjct: 4 FSVSEISGALKRTVEDAFSHIRVRGEISGFT-QAGSGHCYLALKDDKAVLDSVIWRGVVS 62 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +I F PE G+E + G++TT+ G S+YQ++IE L +G G L+ L++R++ L EEGLF+ Sbjct: 63 RISFRPENGMEVIATGRLTTYAGRSRYQLVIEQLEIAGQGALMALLDRRRRMLAEEGLFN 122 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194 K +PF+PKII V++SP+GAVIRDIL R++ R P VI++PV VQGD+ ++A A+ Sbjct: 123 ADRKRALPFMPKIIGVVSSPSGAVIRDILHRLADRCPTHVILWPVPVQGDQAAAKVAAAV 182 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + LK G PRPD++I+ARGGGS+EDLW FN+E++VRA+A SSIP+ISA+GHETD T Sbjct: 183 RGFSALKAGDVIPRPDLLIVARGGGSLEDLWPFNEEILVRAVAESSIPVISAVGHETDTT 242 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L DYAADLRAPTPT AAE+AVPV+ L + L NL R+NN I R K L ++ + L Sbjct: 243 LCDYAADLRAPTPTAAAELAVPVRSELVNGLNNLHLRMNNAIARHAKLSEERLEAVRQRL 302 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 P+ ++ L+ D +LE ++ + N ++ L I + + + Sbjct: 303 PDGERLLAPFIQLFDDRASQLERDISERMTHARHKLNFYAATLRPALLKARIAREQARLS 362 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE------ 428 + + R + E+++ + L++ + R+ + K L +++ Sbjct: 363 ACR------LPTGQRLVIQEQQKLDNVTRRLKQAYQQRLSHADLRFKFLAEKLQPLLLKQ 416 Query: 429 ----------------FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 +++ ++ ++ R+ + L +GY ++D++++ Sbjct: 417 RWQQKAELLAACSLKPELVTARLNIWQKNIDQLWRVAEQAHPDKILAKGYARVEDSHSHV 476 Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527 ++ + T R+ + F DG T + + Q Sbjct: 477 VSNAHDAKTHKRLNLIFHDGSVWV---------APDTPPKSRKADNPPEPPEQTS 522 >gi|146283340|ref|YP_001173493.1| exodeoxyribonuclease VII large subunit [Pseudomonas stutzeri A1501] gi|158514182|sp|A4VNV0|EX7L_PSEU5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|145571545|gb|ABP80651.1| exodeoxyribonuclease VII large subunit [Pseudomonas stutzeri A1501] Length = 458 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ +LD +VS+L+ + ++E + V V GEIS +SGH YF+LKD + Sbjct: 4 DPF-QRLNLDREVLTVSQLNGRARLLLEDVFAQVWVEGEISNL-ARPASGHVYFTLKDRN 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++ L P+G G L A E Sbjct: 62 AQVRCALFRQNAARVRQALRDGLAVRVRGKVSLFEGRGDYQLILDMLEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K +P P+ I +++SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAAEGLFSAERKAALPAHPRRIGIVSSPTGAVIRDIISVFRRRAPQVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 182 VQGREATGQIVRALQLADAQ-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+ A+GHETD ++AD+ AD+RAPTP+ AAE+ P LQ L L+ RL + + Sbjct: 235 TPIVCAVGHETDVSIADFVADVRAPTPSAAAELLAPSSADLQQRLNGLQQRLVLRMRDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L+ L + L + + L R+D L + L L+ + + R+ + Sbjct: 295 HRDAMRLDGLTRRLRHPGERLQQQAQRIDDLEQRLLRALDRRLCSGQERLARLETRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + ++ +++ Sbjct: 355 HPGRTLNLLRQRLDHLSSRLPRAMQANIKGRRQ--------------------------- 387 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + L + TL RGY+ + D I Sbjct: 388 --------------------QLQGLAQTLNVVSPLATLSRGYSILLDDRGQAIRSASQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ DG+ + V + Sbjct: 428 PGQRLKARLGDGELDVRVED 447 >gi|253989305|ref|YP_003040661.1| exodeoxyribonuclease VII large subunit [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780755|emb|CAQ83917.1| exodeoxyribonuclease 7 large subunit [Photorhabdus asymbiotica] Length = 457 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 137/502 (27%), Positives = 233/502 (46%), Gaps = 57/502 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + +SVS L+ ++ ++E + + + EIS + SSGH YF+LKD +++ A +++ Sbjct: 6 NTGIFSVSRLNQTVRQLLEMEMGKIWLSAEISNF-SQPSSGHWYFTLKDERAQVRAAMFR 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ F P+ G + LV IT + YQ+I+ES+ P+G G L E K+KL +E Sbjct: 65 NNNQRMTFKPQNGQQVLVRAAITLYEPRGDYQLIVESMQPAGDGLLQQQFELLKQKLSDE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF +K P+P + + VITS +GA + DIL + R P L ++I+P VQG E P + Sbjct: 125 GLFDQNYKKPLPSPAQQLGVITSTSGAALHDILNILKRRDPSLPIVIYPTAVQGTEAPLQ 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I +I N +E D++I+ RGGGS+EDLW FNDE + RAI S+IPI+SA+GH Sbjct: 185 IIRSIELANERRE------CDVLIVGRGGGSLEDLWSFNDEHVARAIFRSNIPIVSAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD T+AD+ ADLRAPTP+ AAE+ + L + + + RL + K + Sbjct: 239 ETDVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQQQRLEMAMDYFFAQKQRVFSL 298 Query: 310 LLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L L +R + L + L +L+ + + + + R+ I+ Sbjct: 299 LHHRLQQQHPHLRLARQQNLLVSLRQRLTDSLQRHLRQSDLAYEKLQQRLWHSEPGQQIR 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + Q I ++ ++Q Sbjct: 359 QYSQQIQQQDFRLKQ--------------------------------------------- 373 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + ++ +++ +++ + TL RGY+ + + + Q + + I Sbjct: 374 --AIERQLSRSREKFAVSCSRMEAVSPLATLARGYSISEAPDGKLLKQTKQVHVGNAIRT 431 Query: 488 NFFDGQANAIVINKAPPKEQPT 509 + DG + V + + Sbjct: 432 HLQDGWVESEVTKVKKERRKRP 453 >gi|284008491|emb|CBA74991.1| exodeoxyribonuclease VII large subunit [Arsenophonus nasoniae] Length = 449 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 57/495 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + YSVS+L+ ++ ++E L V + EIS + +SGH YF+LKD +++ A +++ Sbjct: 6 NSIIYSVSQLNQSVRQLLELQLGRVWLNAEISNF-SQPASGHWYFTLKDEKAQLRAAMFR 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G ++ F P+ G + LV +T + +YQ+IIE++ P+G G L E K+KL E Sbjct: 65 GQNIRLNFRPQNGQQVLVRATVTLYEPRGEYQLIIENMQPAGDGLLQRQFEILKQKLSAE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ +K +P K + VITS TGA + DIL + R P L VII+P VQG++ P++ Sbjct: 125 GLFAQHYKQALPMPAKRLGVITSATGAALHDILNILKRRDPSLPVIIYPTAVQGEDAPRQ 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI N +E D++I+ RGGGS+EDLW FNDE + RAI S +PII+A+GH Sbjct: 185 IVRAIEVANHRQE------CDVLIVGRGGGSLEDLWAFNDEKVARAIFASQLPIIAAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD T+AD+ ADLRAPTP+ AAE+ ++ L L+ + RL + + K+ + Sbjct: 239 ETDVTIADFVADLRAPTPSAAAELVSRNQQELLRQLLEQKQRLEMAMDYFLARKLRVFSQ 298 Query: 310 LLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L L +R + +L ++L + + + R + R+ +Q Sbjct: 299 LHHKLQQQHPELRITRQQNYLIQLQQKLVSATQHYLQQINRQHYSLEQRLILCDPRPQLQ 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 RQ ++ + ++Q+ Sbjct: 359 TCRQRYIQHEFQLKQL-------------------------------------------- 374 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 ++ + +I L++ + TL RGYT + N +T + + ++ Sbjct: 375 ---INQTLSQYREKFAINCSRLEAVSPLATLARGYTISELPNGKVLTNTQQVDVGVKLKT 431 Query: 488 NFFDGQANAIVINKA 502 DG + +++ Sbjct: 432 RLQDGWLESKILSIN 446 >gi|229592432|ref|YP_002874551.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens SBW25] gi|259646297|sp|C3K1K5|EX7L_PSEFS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|229364298|emb|CAY52033.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens SBW25] Length = 459 Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats. Identities = 140/500 (28%), Positives = 235/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E +++ V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREILTVSQLNGRARVLLEDVFTNIWVEGEISNL-ARPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ ++G+ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 182 VQGREAIPQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACI 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P HL + NL RL ++ + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + + + R+ Sbjct: 295 SHDRLRLEGMARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLAGQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ L+ L+ + ++ Sbjct: 355 HPGRQLALLRQRLESLAERLPRAMREGLKARRLQLQSQV--------------------- 393 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D I Sbjct: 394 --------------------------QTLHVVSPLATLGRGYSILLDERGQAIRTAAQTH 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +GQ V + Sbjct: 428 TGQRLTARLGEGQLQVRVED 447 >gi|116748854|ref|YP_845541.1| exodeoxyribonuclease VII large subunit [Syntrophobacter fumaroxidans MPOB] gi|116697918|gb|ABK17106.1| Exodeoxyribonuclease VII large subunit [Syntrophobacter fumaroxidans MPOB] Length = 494 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 144/513 (28%), Positives = 234/513 (45%), Gaps = 53/513 (10%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 D Y+V L+ +K ++ES V V GEIS +R +SGH YF+LKD +S+I A+ ++ Sbjct: 33 DSNIYTVGRLNAEIKAVLESGFPLVWVMGEISNFRV-PASGHFYFTLKDENSQIRAVFFR 91 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + F PE G++ L ++ + +YQ+I+E + P G G L A E+ KKKL E Sbjct: 92 PHNRHLRFHPESGMQVLCQARVGVYEPRGEYQLIVEVMEPQGIGALQLAFEQLKKKLAAE 151 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKE 189 GLF K P+P P+ IA++TSPTGA +RD+L+ +PL V + P VQG +E Sbjct: 152 GLFDPARKTPLPVCPQRIAIVTSPTGAAVRDMLKVFQRSPYPLSVTLLPALVQGQGAARE 211 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI + L + D++I+ RGGGSIEDLW FN+E++ RA+ S+P +SA+GH Sbjct: 212 IAAAIAAADQLADRFGW---DLLIVGRGGGSIEDLWPFNEEVVARALWACSLPTVSAVGH 268 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+T++D AD R PTPT AAE V + + L ++ RL + +R ++ Sbjct: 269 EIDFTISDLVADARMPTPTAAAEWVVTRLDRIHRDLRQVDERLTRMAVRTVQTARMQFGY 328 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + LP+ + L R LD L L I + + + ++++ I Sbjct: 329 VRDRLPDPGRRLEDLRLYLDDRMERLMMGLARRIEQLRAVYGRLEEKLQAVHPARIIDGY 388 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R + + + + +L R+ +NR+ Sbjct: 389 RAALEQGTKEL--------------------LLAHKRQLAQNRL---------------- 412 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488 + T L++ + + L RGY+ + ++ R+L+ Sbjct: 413 -----------RLEATAARLENLSPLSVLSRGYSITYRLPMKKVVVHSDDVGAGDRVLVR 461 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521 G + V + + +R Sbjct: 462 LSRGSLDCTVNEARDDEMPGAGAVSRRDGQRNP 494 >gi|331019369|gb|EGH99425.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 463 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 234/500 (46%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 8 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 66 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 126 ALKAKLSDEGLFSADRKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA Sbjct: 186 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARATEACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + +K H+ +R+ + Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 394 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 395 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 432 PGQRLTARLGEGELQVRVED 451 >gi|261345938|ref|ZP_05973582.1| exodeoxyribonuclease VII, large subunit [Providencia rustigianii DSM 4541] gi|282566024|gb|EFB71559.1| exodeoxyribonuclease VII, large subunit [Providencia rustigianii DSM 4541] Length = 455 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 135/508 (26%), Positives = 229/508 (45%), Gaps = 57/508 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + YSVS+L+ ++ ++++ + + + EIS + SSGH Y +LKD+ +++ A Sbjct: 2 STQQNSAIYSVSKLNQTVRELLDTQMGRIWLTAEISNF-SQPSSGHWYLTLKDDRAQVRA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +T + YQ+IIES+ P+G G L E K+ Sbjct: 61 AMFRGQNTRVAFRPQNGQQVLVRATVTLYEPRGDYQLIIESMQPAGEGLLQQRFELLKQA 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L +GLF HK +P K + VITS TGA + DIL + R P L VII+P VQG+ Sbjct: 121 LNAQGLFDVIHKQALPSPAKCVGVITSATGAALHDILNILRRRDPSLPVIIYPTAVQGEL 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FN+E++ RAI NS +PIIS Sbjct: 181 APAQITRAIELANLRNE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFNSRLPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+ADY AD+RAPTP+ AAE+ + + L + + L + + + Sbjct: 235 AVGHETDVTIADYVADVRAPTPSAAAELVSRNQTEMLRQLKSSQQHLEMALDYYLAGQQQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R + + + + F R+ + L Sbjct: 295 RFARLQHRLQQQHPQLRLARQQNQLNGLQQKLNLAINRQLQSATWRFEKNKQRLVQNDLR 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +Q ++ + + Q H++ + Sbjct: 355 PKLQHQQRQLQQTQYHLQNM---------------------------------------- 374 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L+ + ++ +++ + TL RG++ + + + + + Sbjct: 375 -------LTRLVTDYRQRFAVACSKMEAVSPLATLARGFSISETSQGAVLKKTSQVKLGQ 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511 ++ DG + V + K + K Sbjct: 428 QLKTRLNDGWVESQVTSIQKIKVKKVTK 455 >gi|325130400|gb|EGC53164.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis OX99.30304] Length = 451 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 237/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 KN I L T + +++ Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ ++DT I L ++ I F DG Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|31563085|sp|Q886X9|EX7L_PSESM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 459 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSADRKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + +K H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKVRKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLTARLGEGELQVRVED 447 >gi|313668507|ref|YP_004048791.1| exonuclease VII large subunit [Neisseria lactamica ST-640] gi|313005969|emb|CBN87426.1| exonuclease VII large subunit [Neisseria lactamica 020-06] Length = 451 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 234/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K ++E++L+ + + GE+S +SGH YFSLKD+ +++ +++KG Sbjct: 9 VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCVMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNKVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMKQNLRAHTARFERQTQALQHCRPDISV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + R + ++ Sbjct: 356 CKNNIDRFQTALSHAFRQLLARRR------------------------------------ 379 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 380 -------QSLAAQASLLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|325136479|gb|EGC59085.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis M0579] gi|325201928|gb|ADY97382.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis M01-240149] gi|325208321|gb|ADZ03773.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis NZ-05/33] Length = 451 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +++ K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AEERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSEFQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 KN I L T + +++ Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ ++DT I L ++ I F DG Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|28868653|ref|NP_791272.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|28851892|gb|AAO54967.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv. tomato str. DC3000] Length = 463 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 235/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 8 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 66 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 126 ALKAKLSDEGLFSADRKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 186 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + +K H+ +R+ + Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKKQVRLAHMESRLTAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKVRKLQLQ------------------------ 394 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 395 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 432 PGQRLTARLGEGELQVRVED 451 >gi|312110280|ref|YP_003988596.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. Y4.1MC1] gi|311215381|gb|ADP73985.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. Y4.1MC1] Length = 451 Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats. Identities = 158/488 (32%), Positives = 243/488 (49%), Gaps = 59/488 (12%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V L+ ++K E +L + ++GEIS ++ HS GH YF+LKD +RI A+++ G Sbjct: 8 TVGALTKYIKRKFEVDPHLRDLWIKGEISNFK-YHSRGHMYFTLKDEQARIQAVMFAGYN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE+G++ LV G+I+ + S YQI ++ + P G G L A E+ KK+L EGLF Sbjct: 67 QYLSFRPEDGMKVLVRGEISVYEPSGNYQIYVKEMQPEGIGNLYLAYEQLKKRLEAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 S +HK PIP P+ I V+TSPTGA IRDIL I R+P+ VI+FP VQG+E I Sbjct: 127 SAEHKKPIPAFPRYIGVVTSPTGAAIRDILTTIRRRYPIATVILFPTLVQGEEAAGSIVR 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I + N L D++I+ RGGGSIE+LW FN+E + RAI S +PIISA+GHETD Sbjct: 187 SIEKANELGC------IDVLIVGRGGGSIEELWAFNEEAVARAIFASKVPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTPTGAAE+AVP L + + RL + I + L L K Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHVTELMERISQRKLRLMRAMKEKIAAESERLLRLQK 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + ++ +LD L L+ + E + +K + ++ + + + Sbjct: 301 SYAFRYPEKLYEQKEQQLDALLERLQRHTERLFDKKREQLEQLRLKLLRHHPAEQLSRMK 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + +E+ ++ H+ + L ++ LH L Sbjct: 361 EKHESLVKSLEKEMRSHIHHQQLRFTSLVSHLHAL------------------------- 395 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + ++RGY+ + + + R L I + Sbjct: 396 ----------------------SPLKIMERGYSLVYNEKKELVKSIRQLQLGDTIQVRLQ 433 Query: 491 DGQANAIV 498 DGQ + V Sbjct: 434 DGQVDCHV 441 >gi|115376391|ref|ZP_01463628.1| exodeoxyribonuclease VII, large subunit [Stigmatella aurantiaca DW4/3-1] gi|310822668|ref|YP_003955026.1| exodeoxyribonuclease 7 large subunit [Stigmatella aurantiaca DW4/3-1] gi|115366598|gb|EAU65596.1| exodeoxyribonuclease VII, large subunit [Stigmatella aurantiaca DW4/3-1] gi|309395740|gb|ADO73199.1| Exodeoxyribonuclease 7 large subunit [Stigmatella aurantiaca DW4/3-1] Length = 575 Score = 357 bits (915), Expect = 4e-96, Method: Composition-based stats. Identities = 146/507 (28%), Positives = 236/507 (46%), Gaps = 23/507 (4%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV EL+ LK +ES V VRGE+SG+RG ++ GH YFSLKD + IDA +W Sbjct: 77 VLSVGELTRQLKETIESRYPRVIVRGEVSGFRGANARGHLYFSLKDVDASIDAKLWASQA 136 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F +G+E + G + + +Y +I++ L P G G L A E+ K++L EGL Sbjct: 137 PRLRFALRDGLEVVAEGSVDVYAPQGRYSLIVQKLEPVGEGALALAFEQLKERLAAEGLI 196 Query: 134 ---SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 + P+PF+P+ I V+TS TGA ++D L+ +S R P L V++ +VQG+ E Sbjct: 197 GSRRIRPPRPLPFLPRRIGVVTSRTGAALQDFLRVLSSRHPRLSVLLCDARVQGEGSAPE 256 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A AI +L D+I++ RGGGS+EDLW FN+E++ RAI S +P++SAIGH Sbjct: 257 VARAIARL-------GRTDVDVIVVTRGGGSVEDLWTFNEEVVARAIHASPVPVVSAIGH 309 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+T+AD+ AD RAPTP+ AAE PV L+ +L ARL R + Sbjct: 310 EIDFTIADFVADFRAPTPSAAAERLAPVLSDLELALDTHAARLRQAAERRVLELRERQGH 369 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L L + + L R L E+ L + K + R++ + + Sbjct: 370 LAGRLVDPRRRLGQERLHLSEQLEEMMRALRPALRTKREALRALQERLQRARPQARLGEQ 429 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R H+ +++ ++ + + L + R R+ + R+ Sbjct: 430 RAHLHRLAARLQEALRLGVATRRADLAR--GRLGLERASPTLRVAAERARVNAHKARLLA 487 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRILIN 488 + + + L + + + RGY + T+ + ++ + I Sbjct: 488 LQAQVLADSQGRFQRLAAQLDALSPLKIMSRGYAVAFRKTDGAVVRSITDVQPGMTLGIK 547 Query: 489 FF-DG--------QANAIVINKAPPKE 506 F +G + A V P + Sbjct: 548 FANNGARTLGGCEEIEATVTAVKGPTD 574 >gi|77164136|ref|YP_342661.1| exodeoxyribonuclease VII [Nitrosococcus oceani ATCC 19707] gi|254435291|ref|ZP_05048798.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus oceani AFC27] gi|76882450|gb|ABA57131.1| Exodeoxyribonuclease VII large subunit [Nitrosococcus oceani ATCC 19707] gi|207088402|gb|EDZ65674.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus oceani AFC27] Length = 452 Score = 357 bits (915), Expect = 4e-96, Method: Composition-based stats. Identities = 141/506 (27%), Positives = 232/506 (45%), Gaps = 55/506 (10%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M S + Y++S L+ +HI+E + + + GEIS SSGH YF+LKD Sbjct: 1 MESPSHNLNPTREIYTISRLTREARHILEGSFPLLWIEGEISNL-SRPSSGHFYFTLKDK 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I +++ + F EEG + L ++ + ++Q+I+E L +G G L A Sbjct: 60 IAQIRCAMFRNRNRLLGFSLEEGTQVLARVQVGLYEARGEFQLIVEYLEEAGDGALRRAF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E K++L EGLF+ HK +P +P+ I +ITSP+GA IRDIL + RFP + V+I+P Sbjct: 120 EALKQRLSAEGLFAAAHKRSLPILPQRIGIITSPSGAAIRDILSVLKRRFPAVPVLIYPT 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ + IA AI + D++ILARGGGS+EDLW FN+E + R I + Sbjct: 180 PVQGEGAFQRIAAAIAK------AEQHRACDLLILARGGGSLEDLWAFNEEALARVIYHC 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +PII +GHE D+T+AD+ AD RAPTP+ AAEMAVP + +NLE RL + + Sbjct: 234 PLPIICGVGHEIDFTIADFTADQRAPTPSAAAEMAVPDSREWYRNFLNLEQRLKLLFQQH 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++++ L +L K L + L ++D L + LE + ++ + ++ Sbjct: 294 LRHRRQLLENLTKRLRHPHIRLQEGIQQVDELEQRLERAWTHLNRERFHQLGGLSIQL-- 351 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 Q + + H Sbjct: 352 ------------------QRL---------------------------NPAQHLKAYHLR 366 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 +++L R+ ++ + + R L + + + TL+RGY + + + + Sbjct: 367 LRELNRRLPTCQQQRLGQQQMRLEMVQRALHAVSPQATLERGYAIVTGPKGIVLRKASQV 426 Query: 480 ATKTRILINFFDGQANAIVINKAPPK 505 +I +G V Sbjct: 427 QPGAKIEARLAEGHIRGEVTEILDKP 452 >gi|297584558|ref|YP_003700338.1| exodeoxyribonuclease VII large subunit [Bacillus selenitireducens MLS10] gi|297143015|gb|ADH99772.1| exodeoxyribonuclease VII, large subunit [Bacillus selenitireducens MLS10] Length = 454 Score = 357 bits (915), Expect = 4e-96, Method: Composition-based stats. Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 59/502 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +SV+EL+ +K + +L +V +R EIS ++ HS GH YF+LKD SRI ++ Sbjct: 1 MNQEFWSVTELTKTIKEKFDTAPDLQNVWLRAEISNFKH-HSRGHMYFTLKDAGSRIQSV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G+ ++F PE G+ L+ G+++ + +YQ+ ++ + P G G L A E+ K+KL Sbjct: 60 MFAGSNRYLKFTPENGMSVLIRGQVSVYEPYGQYQLYVKEMQPDGIGNLYLAFEELKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS + K IP PK IAV+TSPTGA +RD++ ++ R+P+ V + PV+VQG+ Sbjct: 120 DREGLFSQESKKRIPRTPKRIAVVTSPTGAAVRDMITTLNRRYPVASVTLLPVQVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI Q D++I+ RGGGS+E+LW FN+E + RAI + +IP+ISA Sbjct: 180 APTIVKAIRQ------AEEEGSFDVLIVGRGGGSLEELWAFNEESVARAIFSCTIPVISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T++D+ ADLRA TPT AAE+AVP ++ + LI+ + RL + +++ + Sbjct: 234 VGHETDVTISDFVADLRAATPTAAAELAVPDQQEMIDWLIDRKKRLRHSFNQMVTREQTR 293 Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L A Q + LDRL L + I ++ R+ Sbjct: 294 LQRLMASYAFRYPKQLIEQKEQDLDRLLDRLHAATDRKIDVHQEAVRYLYGRLYVQHPAR 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + R ++ ++ + + + + + Sbjct: 354 RIDQERINLERSKKALVDAMTDQSNSVRQALQLLAS------------------------ 389 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + +GY+ D N N + + L Sbjct: 390 -----------------------KLDLLSPLKLMAKGYSLTYDQNGNLVKEIDQLNEGDG 426 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + DG+ N V K K Sbjct: 427 FTVRLQDGELNGEVKAKKRVKR 448 >gi|330965926|gb|EGH66186.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. actinidiae str. M302091] Length = 459 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 236/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQSMHKRQVRLAHMESRLTAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLTAKLGEGELQVRVED 447 >gi|329119682|ref|ZP_08248363.1| exodeoxyribonuclease VII large subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327464279|gb|EGF10583.1| exodeoxyribonuclease VII large subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 450 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 136/493 (27%), Positives = 220/493 (44%), Gaps = 58/493 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ K ++E + S + V GE+S +SGH YFSLKD +++ ++KG Sbjct: 10 LSVSELNAAAKLLLEEHFSGLWVAGEVSNLT-RAASGHYYFSLKDARAQVRCAMFKGVAQ 68 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + +EG V G+I+ + ++QI + + G G L A E+ K L EGLF+ Sbjct: 69 RFA-AMKEGDHIEVRGRISIYEARGEFQITVNEVRVKGLGRLYEAYEQLKAALQAEGLFA 127 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K P+P P+ I ++TSP A +RD+L + R P L VI++P VQG E ++ A Sbjct: 128 AERKRPLPAHPQRIGIVTSPAAAALRDVLSTLRRRAPDLPVILYPAAVQGAEAAPQLVRA 187 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + E D++I+ RGGGSIEDLW FN+E +VRA+A IP++S +GHETD+ Sbjct: 188 VNAASERGE------CDVLIVCRGGGSIEDLWPFNEEAVVRAVAACRIPVVSGVGHETDF 241 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TL D+AAD RAPTPT AAE+A P + L L E RL + + + + Sbjct: 242 TLTDFAADTRAPTPTAAAELAAPDRATLLHRLAEAEGRLKTAALYRYQDAAQRTDWCARQ 301 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + Q L R R+ L + + RQ++ Sbjct: 302 LRHPRQKLDAQRARVAECAARLAAAARACLRLSDEKLS------------------RQNL 343 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 L + + + R+ T + + + Sbjct: 344 LLQHARPDTAAQTG------------------------RLNAFQTALTRNAGVLLAA--- 376 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + +L + + ++ L RG++ +++T + L + I F +G+ Sbjct: 377 ----KKQRLEKQAALLDAVSPQHILARGFSVVRNTRGQVVRDAAALKQGQTLHITFAEGE 432 Query: 494 ANAIVINKAPPKE 506 A V + + Sbjct: 433 AAVRVSSDTAQPD 445 >gi|330957539|gb|EGH57799.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. maculicola str. ES4326] Length = 459 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 237/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHKRQVRLAHMESRLTAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDVLAERLPRAMREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRTAAQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|238788163|ref|ZP_04631958.1| Exodeoxyribonuclease 7 large subunit [Yersinia frederiksenii ATCC 33641] gi|238723750|gb|EEQ15395.1| Exodeoxyribonuclease 7 large subunit [Yersinia frederiksenii ATCC 33641] Length = 463 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 145/507 (28%), Positives = 229/507 (45%), Gaps = 57/507 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ +++ T Sbjct: 9 IFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRCAMFRNTN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++L EGLF Sbjct: 68 RRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLAVEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 HK +P K + VITS +GA + D+LQ + R P L VII+P VQG + P +I Sbjct: 128 DQSHKQSLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGADAPLQIVR 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+GHETD Sbjct: 188 AIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVSAVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + L Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRSQQFTRLEH 301 Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L +R + +L R LE + + I R + R+ I + Sbjct: 302 RLQQQHPHLRLARQQTLLLKLQRRLEESAQAQIRLLSRRTERLQQRLVQVQPQGQIHRYN 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + +++ + Q Sbjct: 362 QRVQQQEYRLRQ-----------------------------------------------A 374 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L ++ I L++ + TL RGY+ Q + + + T ++ Sbjct: 375 LERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPEGTLLKTTQQVHTGDKLTTRLQ 434 Query: 491 DGQANAIVINKAPPKEQPTKKCQLHNN 517 DG + + K+ TKK + Sbjct: 435 DGWVESEITQINVAKKNVTKKPRQRKA 461 >gi|121635069|ref|YP_975314.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis FAM18] gi|158513147|sp|A1KUI5|EX7L_NEIMF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|120866775|emb|CAM10528.1| exonuclease VII large subunit [Neisseria meningitidis FAM18] gi|325132444|gb|EGC55137.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis M6190] gi|325138218|gb|EGC60787.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis ES14902] Length = 451 Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 237/490 (48%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRAHTARFERQTQALQHYRPDVSV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 KN I L T + +++ Sbjct: 356 ------------------------------------CKNNIVRLQTALPAAFSQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ ++DT I L ++ I F DG Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|258511743|ref|YP_003185177.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478469|gb|ACV58788.1| exodeoxyribonuclease VII, large subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 469 Score = 356 bits (914), Expect = 5e-96, Method: Composition-based stats. Identities = 154/505 (30%), Positives = 240/505 (47%), Gaps = 59/505 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58 MN ++ + +V+EL+ +K +ES+ L V GEIS ++ SGH YF+LK Sbjct: 1 MNALTRAAAEAEAVLTVTELNRRIKERLESDPRLIQCRVVGEISNFKHHP-SGHMYFTLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D SRI A+++ +++F PE+G+ + G + F +YQ+ +E L P G G L Sbjct: 60 DETSRIRAVMFSSRNRRLQFQPEDGMRVIAFGSVGVFERDGQYQLYVEDLEPDGLGALYV 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIF 177 E+ +++L EGLF+ + K +P P + V+TSPTGAVIRDI I R+PL RVI+ Sbjct: 120 RYEQLRQQLAAEGLFAPERKRLLPRFPLRVGVVTSPTGAVIRDICTTIERRYPLARVILA 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P +VQG + I A+ L L P+ D+II+ RGGGS+E+LW FN+EM+VRA+A Sbjct: 180 PAQVQGPDAAPTIVRALEVLYAL-----EPKVDVIIVGRGGGSLEELWPFNEEMVVRAVA 234 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S +P++SA+GHETD TL D+AAD+RA TPT AAE+ P + L++ L AR + Sbjct: 235 RSPVPVVSAVGHETDVTLCDFAADVRAATPTAAAELVCPHQAELRAYLEQASARARKAAL 294 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L L L + + ++ R +D + + I + R + Sbjct: 295 VKVAWGRERLLDLAGRPVLRDPTRIIAVRRQLVDFIETRVREAQRRPIGLRRRALADLER 354 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R++ L IQ R+ ++ + + + Sbjct: 355 RLQRVQLGGAIQGRRRDLMRLEHQVRSLT------------------------------- 383 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FIT 474 ++ + L++ L+RGY I D + IT Sbjct: 384 ----------------ERQLLVQSRKLEGVIGKLEALNPLAVLRRGYGVILDEDGRSVIT 427 Query: 475 QKRNLATKTRILINFFDGQANAIVI 499 ++LA RI I DG A V Sbjct: 428 SAQSLAPGKRIGIRMHDGTVEAEVK 452 >gi|323488927|ref|ZP_08094164.1| exodeoxyribonuclease 7 large subunit [Planococcus donghaensis MPA1U2] gi|323397319|gb|EGA90128.1| exodeoxyribonuclease 7 large subunit [Planococcus donghaensis MPA1U2] Length = 453 Score = 356 bits (914), Expect = 5e-96, Method: Composition-based stats. Identities = 144/498 (28%), Positives = 239/498 (47%), Gaps = 59/498 (11%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P SV L+ ++K + +L V V+GE+S + IH+SGH YF+LKDN +R+ +++ Sbjct: 5 PYLSVKALTKYIKKKFDADPHLRDVYVKGELSNVK-IHTSGHIYFTLKDNSARLPGVMFS 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + ++F PE G+ L+ G +T + S +YQ+ +S+ G G A E+ K+KL +E Sbjct: 64 ASAKSVKFKPESGMTVLIRGDVTVYEASGQYQLYAQSMQVDGIGDYYLAFEQLKEKLAKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189 G+F HK +P PK IAV+T+ TGA +RDI+ + R+PL V+++P VQG + Sbjct: 124 GVFDASHKKRLPRFPKRIAVVTAQTGAAVRDIIITLHRRYPLANVVLYPALVQGSGAVQS 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I +I N D++I+ RGGGSIEDLW FN+E + RAI +S IPIISAIGH Sbjct: 184 IVQSIQAANK-------DDFDVLIVGRGGGSIEDLWAFNEEAVARAIFSSEIPIISAIGH 236 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD T+AD+ +DLRAPTPT AAE+AVP + L + + + Sbjct: 237 ETDTTIADFVSDLRAPTPTAAAELAVPSQAELLERISSYRS------------------- 277 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR-HFNHIINRIKSDFLIHNIQK 368 + N +S + L RL ++R + + ++ + L H + + Sbjct: 278 --QMYRNVSSAVSQQKQALHRLTSSYPLAYPERLYRPFIERVERATDSLQRESLQH-LNR 334 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++++ Q ++ + +I T + +L R++ Sbjct: 335 SKEYYRTLDQRLKSRM------------------------PLQQIRQSETDVTELARRLD 370 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + +K+ +S R L + + + RGY+ + + ++ + Sbjct: 371 YQIKQLLKNHSRQLSSAIRTLDALSPLKIMDRGYSIPYIE-GAVVKSVEQVTAGDKLTLA 429 Query: 489 FFDGQANAIVINKAPPKE 506 DG A V P + Sbjct: 430 MQDGTIQATVNEINPAPK 447 >gi|300115025|ref|YP_003761600.1| exodeoxyribonuclease VII large subunit [Nitrosococcus watsonii C-113] gi|299540962|gb|ADJ29279.1| exodeoxyribonuclease VII, large subunit [Nitrosococcus watsonii C-113] Length = 452 Score = 356 bits (914), Expect = 5e-96, Method: Composition-based stats. Identities = 146/506 (28%), Positives = 239/506 (47%), Gaps = 55/506 (10%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M S + Y++S L +H++E + + + GE+S SSGH YF+LKD Sbjct: 1 MENTSYNLNPAREIYTISRLVREARHLLEGSFPLLWIEGEVSNL-SRPSSGHFYFTLKDK 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++G + EEG++ L ++ + ++Q+I+E L +G G L A Sbjct: 60 TTQVRCAMFRGRNRLLGITLEEGMQILARVQVGLYEARGEFQLIVEYLEKAGDGALRRAF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E K++L EGLF+ HK +P +P+ I +ITSP+GA IRDIL + RFP + V+I+PV Sbjct: 120 EALKQRLSSEGLFATSHKRSLPILPRQIGIITSPSGAAIRDILSVLKRRFPTVPVLIYPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ ++IA AI + D++ILARGGGS+EDLW FN+E + RAI + Sbjct: 180 PVQGEGAAQKIATAIAK------AEQQHTCDLLILARGGGSLEDLWAFNEEALARAIYHC 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPIIS +GHE D+T+AD+AAD RAPTP+ AAEMAVP +++NLE RL ++ + Sbjct: 234 PIPIISGVGHEIDFTIADFAADQRAPTPSAAAEMAVPDSREWYRNVLNLEQRLGSLFQQR 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++Y +L SL + L + L R+D L + L+ + + + +++ Sbjct: 294 LRYLRQSLESLTQRLRHPQARLQEGAQRIDELEQRLDRAWTHLKRERLHQLGGLSLQLQR 353 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ + E Q + +QH Sbjct: 354 LNPAQYLKACHLRLGELNQLLHTYQQQH-------------------------------- 381 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 ++ + + R LQ+ + TL+RGY + + + + Sbjct: 382 ---------------LEKQRMQLEMAQRSLQAINPQTTLERGYAIVTGPKGIVLRKASQV 426 Query: 480 ATKTRILINFFDGQANAIVINKAPPK 505 RI + +G V Sbjct: 427 QPGARIEVQLAEGHIRGEVTETLDKP 452 >gi|330895899|gb|EGH28184.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. japonica str. M301072PT] gi|330936964|gb|EGH41070.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. pisi str. 1704B] Length = 459 Score = 356 bits (914), Expect = 5e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 239/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQLRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ + V + Sbjct: 428 TGQRLTARLSEGELHVRVED 447 >gi|261392362|emb|CAX49902.1| exodeoxyribonuclease VII large subunit (exonuclease VII large subunit) [Neisseria meningitidis 8013] Length = 451 Score = 356 bits (914), Expect = 5e-96, Method: Composition-based stats. Identities = 133/490 (27%), Positives = 233/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI +IP++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L ++++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLEQTLSYSMKQNLRAHTARFERQTQALQHCRPDVSV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 ++ + + ++ Sbjct: 356 CKNNIVRLQTALSHAFHQLLTHRR------------------------------------ 379 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 S++ +L++ + ++ L+RG++ ++DT I L ++ I F DG Sbjct: 380 -------QSLTAQAALLEAVSPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|160876249|ref|YP_001555565.1| exodeoxyribonuclease VII large subunit [Shewanella baltica OS195] gi|189037841|sp|A9KWW8|EX7L_SHEB9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|160861771|gb|ABX50305.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS195] gi|315268438|gb|ADT95291.1| exodeoxyribonuclease VII, large subunit [Shewanella baltica OS678] Length = 448 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 219/494 (44%), Gaps = 57/494 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + Y+VS L+ ++ I+E L + + GEIS + SSGH Y +LKD+ S+I ++KG Sbjct: 6 NNIYTVSRLNGEVRQILEGQLGKIWLNGEISNFSS-PSSGHWYLTLKDHSSQIRCAMFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F P G + LV G I+ + YQ++IES++P+G G L + K KL EG Sbjct: 65 RNQTVSFKPINGQQVLVKGAISVYEPRGDYQLLIESMLPAGDGLLAQQFDALKMKLAAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K P+P + I VITSPTGA IRD+L ++ R P + VII+P +VQG+ + I Sbjct: 125 LFAADTKRPLPKNIQRIGVITSPTGAAIRDVLHVLARRDPSIEVIIYPTQVQGETAAQSI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI N E D+++L RGGGS+EDLW FN E + I NS++P++SA+GHE Sbjct: 185 CQAINIANQRLE------VDVLLLTRGGGSLEDLWCFNSEALAHTIYNSALPVVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T++DY AD+RAPTP+ AE+ ++ L +RL + L+ L Sbjct: 239 VDTTISDYVADIRAPTPSAGAELLSQDSDNKAQKLATALSRLQQSAKHYQLKQERRLSLL 298 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L +TL R D + LE L + R + +R++ H + Sbjct: 299 EHRLQRQDPKRTLQQFEQRFDEMQLRLESALSNRLHILSRRQQLLASRLEQQSPKHKLAI 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++ ++ Sbjct: 359 EGNRLSYLASRLQDALQD------------------------------------------ 376 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 K+ + L++ + TL RGY+ D +N L + Sbjct: 377 -----KLSQSEQRIQYAAHQLETVSPLATLSRGYSITTDIHNQVADSADKLTIGDSLQTR 431 Query: 489 FFDGQANAIVINKA 502 F GQ + V Sbjct: 432 FRHGQVISTVTQIK 445 >gi|88799910|ref|ZP_01115482.1| exodeoxyribonuclease VII large subunit [Reinekea sp. MED297] gi|88777341|gb|EAR08544.1| exodeoxyribonuclease VII large subunit [Reinekea sp. MED297] Length = 451 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 145/494 (29%), Positives = 236/494 (47%), Gaps = 55/494 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS+L+ +K ++E+ V V+GEIS +SGH YF+LKD ++ ++KG+L Sbjct: 9 PLTVSQLNRQVKQLLETQYPAVPVQGEISTL-SRPASGHLYFTLKDAQGQLRCAMFKGSL 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K + P++G E + G+++ + G YQ+I+ + P G G L A + K+KL EGLF Sbjct: 68 AKNAYKPKQGDEVIAYGRVSLYEGRGDYQLIVNQMQPVGEGELQAAFFRLKEKLAAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 S++HK +P + I ++TS TGA + DIL ++ RFP RVI++P +VQG+E I N Sbjct: 128 SEEHKKSLPDPIQTIGIVTSSTGAALHDILTVLNRRFPATRVILYPTQVQGNEATATIVN 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N +E D +I+ RGGGS+EDLW FN E + RAI S IP+ISA+GHE D Sbjct: 188 AITTANRRRE------VDALIVGRGGGSLEDLWCFNTEPVARAIYASEIPVISAVGHEVD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +++D+ ADLRA TP+ AAEM P + L E +L I + +K TL L + Sbjct: 242 VSISDFVADLRAATPSQAAEMISPDQFELMQRFDVAEKQLLRSIQQTLKRSHTTLTHLKQ 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + D + +L +L + + + NR+ + ++R Sbjct: 302 RLRSPDAIVQQWHQQLRQLRTRFTQATQRQLKMPSDRLQQLSNRLLQRSPQRQLAQDRTQ 361 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I + + +++ K+A+LH RE Sbjct: 362 IEKLEARLQRA--------------KLALLHRKRE------------------------- 382 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 L + + TL+RGY+ + + + + R++ G Sbjct: 383 --------HFQGQVATLNALSPLGTLQRGYSISRTEDGTVLQSADQMKPGDRLITLLRHG 434 Query: 493 QANAIVINKAPPKE 506 Q ++ + + P + Sbjct: 435 QLSSRIETVSVPDD 448 >gi|66044507|ref|YP_234348.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. syringae B728a] gi|75503072|sp|Q4ZX12|EX7L_PSEU2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|63255214|gb|AAY36310.1| Exonuclease VII, large subunit [Pseudomonas syringae pv. syringae B728a] Length = 463 Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats. Identities = 140/500 (28%), Positives = 240/500 (48%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 8 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 66 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 126 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 186 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L LE + ++ H+ +R+ + Sbjct: 299 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRALEQTMHQRQLRLAHMQSRLAAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 359 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 394 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 395 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 431 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ + V + Sbjct: 432 TGQRLTARLGEGELHVRVED 451 >gi|238797971|ref|ZP_04641461.1| Exodeoxyribonuclease 7 large subunit [Yersinia mollaretii ATCC 43969] gi|238718176|gb|EEQ10002.1| Exodeoxyribonuclease 7 large subunit [Yersinia mollaretii ATCC 43969] Length = 459 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 143/510 (28%), Positives = 227/510 (44%), Gaps = 57/510 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ + Sbjct: 4 SSASSIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRCAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ T + F P+ G + LV IT + YQ+I ES+ P+G G L E+ K++L Sbjct: 63 FRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF K +P K + VITS +GA + D+LQ + R P L VII+P VQG + P Sbjct: 123 AEGLFDQSGKQSLPSPAKQVGVITSSSGAALHDVLQVLQRRDPSLPVIIYPTAVQGVDAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+ Sbjct: 183 LQIVRAIQLANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 237 GHETDITIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRGQQF 296 Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L L +R + +L R LE + + I R + R+ Sbjct: 297 TRLEHRLQQQHPHLRLARQQTLLLKLQRRLEESAQTQIRLLGRRTERLQQRLVQAQPQGQ 356 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + Q + +++ + Q Sbjct: 357 IHRYHQRVQQQEYRLRQ------------------------------------------- 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L ++ S I L++ + TL RGY+ Q + + + ++ Sbjct: 374 ----ALERQLNSYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGVLLKTTKQVQAGDKL 429 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLH 515 DG + + K+ +K Sbjct: 430 TTRLQDGWVESEITQINVAKKPRQRKAAKE 459 >gi|295399117|ref|ZP_06809099.1| exodeoxyribonuclease VII, large subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294978583|gb|EFG54179.1| exodeoxyribonuclease VII, large subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 451 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 158/488 (32%), Positives = 243/488 (49%), Gaps = 59/488 (12%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V L+ ++K E +L + ++GEIS ++ HS GH YF+LKD +RI A+++ G Sbjct: 8 TVGALTKYIKRKFEVDPHLRDLWIKGEISNFK-YHSRGHMYFTLKDEQARIQAVMFAGYN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE+G++ LV G+I+ + S YQI ++ + P G G L A E+ KK+L EGLF Sbjct: 67 QYLSFRPEDGMKVLVRGEISVYEPSGNYQIYVKEMQPEGIGNLYLAYEQLKKRLEAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 S +HK PIP P+ I V+TSPTGA IRDIL I R+P+ VI+FP VQG+E I Sbjct: 127 SAEHKKPIPAFPRYIGVVTSPTGAAIRDILTTIRRRYPIATVILFPTLVQGEEAAGSIVR 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I + N L D++I+ RGGGSIE+LW FN+E + RAI S +PIISA+GHETD Sbjct: 187 SIEKANELGY------IDVLIVGRGGGSIEELWAFNEEAVARAIFASKVPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTPTGAAE+AVP L + + RL + I + L L K Sbjct: 241 FTIADFVADLRAPTPTGAAELAVPHVTELMERISQRKLRLMRAMKEKIAAESERLLRLQK 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + ++ +LD L L+ + E + +K + ++ + + + Sbjct: 301 SYAFRYPEKLYEQKEQQLDALLERLQRHTERLFDKKREQLEQLRLKLLRHHPAEQLSRMK 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + +E+ ++ H+ + L ++ LH L Sbjct: 361 EKHESLVKSLEKEMRSHIHHQQLRFTSLVSHLHAL------------------------- 395 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + ++RGY+ + + + R L I + Sbjct: 396 ----------------------SPLKIMERGYSLVYNEKKELVKSIRQLQLGDTIQVRLQ 433 Query: 491 DGQANAIV 498 DGQ + V Sbjct: 434 DGQVDCHV 441 >gi|295695405|ref|YP_003588643.1| exodeoxyribonuclease VII, large subunit [Bacillus tusciae DSM 2912] gi|295411007|gb|ADG05499.1| exodeoxyribonuclease VII, large subunit [Bacillus tusciae DSM 2912] Length = 479 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 145/511 (28%), Positives = 232/511 (45%), Gaps = 58/511 (11%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VSEL+ +++ ++E + L V V GEIS + HSSGH YFSLKD SRI A+++ Sbjct: 9 LTVSELTAYVRELLERDELLQEVWVMGEISNFTH-HSSGHMYFSLKDAGSRIRAVMFASR 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F PEEG++ + G++ F YQ+ +E + P G G+L A + + +L +EGL Sbjct: 68 NRKLIFRPEEGMKVVARGRVAVFDRDGTYQLYVEEMQPEGVGSLYLAFLQTRDRLQKEGL 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K P+P P+++ VITS GA IRDI + R+PL RV+IFP VQG P +A Sbjct: 128 FDRERKRPLPAFPRVVGVITSTEGAAIRDIATTLRRRYPLARVVIFPALVQGPGAPASLA 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ E D+II+ RGGGS E+LW FNDE + RAIA + +P++SA+GHET Sbjct: 188 EALATACAYGE------LDVIIIGRGGGSPEELWAFNDESLARAIAAAPVPVVSAVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ADY AD+RAPTPT AAE+ P L+ + L + ++R ++ Sbjct: 242 DFTIADYVADVRAPTPTAAAELVAPHVLELRRRVEEARRALVDALVRRVQGDRQ------ 295 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 H++ R IQ RQ Sbjct: 296 -------------------------------------RLEHLLGRPGLRRPEQWIQWRRQ 318 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + Q + + IL R K +I ++ +++F + Sbjct: 319 TVDGLHTRLGQAAWKSVFRRKEALIRLTDILG--RHSPKEQIQRSQNRLETQKQKLQFAV 376 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINFF 490 + L++ + ++RG++ + + + LA + + Sbjct: 377 WTGWQRAVHRFERQVDKLEALSPLAVMRRGWSLVYRPDRRELVRNISQLAPGDNVHVRLT 436 Query: 491 DGQANAIV--INKAPPKEQPTKKCQLHNNKR 519 G A+ V I + + + + Sbjct: 437 GGWADCQVWGIEEGSEDGGGATTAKEGSAPK 467 >gi|297529438|ref|YP_003670713.1| exodeoxyribonuclease VII large subunit [Geobacillus sp. C56-T3] gi|297252690|gb|ADI26136.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. C56-T3] Length = 448 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 145/492 (29%), Positives = 232/492 (47%), Gaps = 59/492 (11%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V L+ ++K V+ +L + V+GEIS ++ HS GH YF+LKD+ RI A+++ G Sbjct: 7 TVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQGRIAAVMFAGYN 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE+G+ L G+I+ + + YQ+ ++ + P G G+L A E+ K++L EGLF Sbjct: 66 QHLPFRPEDGMNVLARGEISVYEPNGNYQLYVKEMQPEGVGSLYLAYEQLKQRLEAEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 S HK P+P P+ I V+TS TGA +RDI+ I R+PL +VI+FP VQGD I Sbjct: 126 SPVHKKPLPAFPRCIGVVTSQTGAAVRDIMTTIRRRYPLAKVILFPALVQGDGAAPSIVR 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + N D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA+GHETD Sbjct: 186 AIERANAF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASKIPIISAVGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLNSL 310 +T+AD+ ADLRAPTPT AAEMA P L L + RL + + Sbjct: 240 FTIADFVADLRAPTPTAAAEMAAPHVGELAERLAERKWRLIRAMKERLAADKEQLRRLQG 299 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 A + +LD L L E ++ + + + + R+ +++ + Sbjct: 300 SYAFRYPKRLYEQKEQQLDALLERLSRQRERLVDKHRQRLHELDMRLWRHHPAAELERMK 359 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + +E+ ++ + + +A Sbjct: 360 ERQKAAANALEKAMRTAVERHRFRFRSNLA------------------------------ 389 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L++ + ++RGY+ + + + + L + I Sbjct: 390 -----------------RLEALSPLRIMERGYSLVYNEQGELVKRTNQLRIGEHLSIQVQ 432 Query: 491 DGQANAIVINKA 502 DG+ + V Sbjct: 433 DGRVDCQVTGVE 444 >gi|298486034|ref|ZP_07004108.1| Exodeoxyribonuclease VII large subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159511|gb|EFI00558.1| Exodeoxyribonuclease VII large subunit [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 459 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + +L RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRSAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|256823049|ref|YP_003147012.1| exodeoxyribonuclease VII large subunit [Kangiella koreensis DSM 16069] gi|256796588|gb|ACV27244.1| exodeoxyribonuclease VII, large subunit [Kangiella koreensis DSM 16069] Length = 451 Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats. Identities = 140/495 (28%), Positives = 237/495 (47%), Gaps = 55/495 (11%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 Q+ YSVSEL++ ++ +E + + + GEIS + +SGH YF+LKDN +++ Sbjct: 8 PQQTGETRKIYSVSELAFKVRKQLEDAIGQIWITGEISNL-ALPASGHWYFTLKDNGAQL 66 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 I+K F PE+G + L+ K++ + Q+I E + P+G G L A + K Sbjct: 67 RCAIFKNRNRSARFTPEDGQQVLLRAKLSLYEPRGDIQLIGEYIEPAGEGALQIAFNRLK 126 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 +KL EGLF+ + K PIP P I +ITSP+GA IRD+L + R P + VII+P +VQG Sbjct: 127 EKLQAEGLFAPELKRPIPKFPNKIGIITSPSGAAIRDVLTVLKRRMPQIPVIIYPSQVQG 186 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ K + + N + D++++ RGGGS+ED+W FNDE + R I +S IP+ Sbjct: 187 EKAAKSLIKQLEVANQ------HNQCDVLLVTRGGGSLEDMWCFNDETLARNIRDSRIPV 240 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +SA+GHE D +++D+ ADLRAPTP+ AAE+ VP + LQ L+ LE RL ++ Sbjct: 241 VSAVGHEVDTSISDWVADLRAPTPSAAAELLVPDQAELQHKLVQLERRLTGEFEHRLQVA 300 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L++L+ + + Q L+ + L L + L + ++ K + + +R+ S Sbjct: 301 QSKLDTLIARIIHPKQQLNSYKVELQSLNKSLLGTQKYLLQSKQAEYKELDSRLHSYNPK 360 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + + + + + Q K Sbjct: 361 LQLSQAKNSLKQTNKSLMQSWKY------------------------------------- 383 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + ++ + TL+RGYT +D IT + Sbjct: 384 ---LLKQKQQMLALKAQKLNNI-------SPLATLERGYTITEDETGKAITSMKQAQKSQ 433 Query: 484 RILINFFDGQANAIV 498 + F DG+ + + Sbjct: 434 ELTTRFVDGKVKSKI 448 >gi|291287666|ref|YP_003504482.1| exodeoxyribonuclease VII, large subunit [Denitrovibrio acetiphilus DSM 12809] gi|290884826|gb|ADD68526.1| exodeoxyribonuclease VII, large subunit [Denitrovibrio acetiphilus DSM 12809] Length = 493 Score = 356 bits (913), Expect = 7e-96, Method: Composition-based stats. Identities = 124/496 (25%), Positives = 243/496 (48%), Gaps = 13/496 (2%) Query: 15 YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V+E++ +K ++E+ +V V+GEIS + + GH YF +KD ++I ++++G Sbjct: 4 YTVTEITRAVKGLIENTFADNVAVKGEISSFSRSPA-GHLYFVMKDEKAQIKCVMFRGMA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K+++ P+ G +G++T + YQ++++ L G E+ +KKL EEGLF Sbjct: 63 GKLDYSPKNGDSVEAVGELTVYEAGGNYQLLVKKLDYDSVGLFWQLFEEVRKKLEEEGLF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 +++ K +PF+PK +AVITSP GA I+D L + V I+ V VQG + I + Sbjct: 123 AEELKKALPFLPKRVAVITSPEGAAIKDFLITMKNNDVVFEVDIWGVPVQGKDAVAPIVS 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ + + + R D+++L RGGGS+EDL FN+E + RA+A +P +SAIGHE D Sbjct: 183 ALSKAGAMTD-----RYDVVVLMRGGGSLEDLAVFNEEYVARALAACEVPTVSAIGHERD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 ++ D+ AD+R TPT AA + L + R+ NI+ + + L+ L+ Sbjct: 238 VSICDFVADVRVATPTAAASLLGEGYRSAGRDLKDFGRRMINIMNQQMMTANQRLDMLIS 297 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 ++ + + + R L+ + + L ++ + N + + + +++ + Sbjct: 298 SVNSASPAKRVLSDRRHLEHMVKSLSLHMLQSVHTGKSRVNELSKVMAKLTPQNELERRK 357 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + ++ ++ + R + + + R + + + L+ RI+ Sbjct: 358 SSLSDYERRLKDALLAKKRTESDKINNLMQTVA--RYAPDRKAEKYKSKLDSLLYRIQTA 415 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +I ++ T L++ N L +GY+ + + + +++ + + I Sbjct: 416 ARSEISDNKNRLTPLTAKLEALDPHNILSKGYSFVM-KDGKPVKSVFDISLQDELEIRLN 474 Query: 491 DGQANAIVINKAPPKE 506 DG N+ V K +E Sbjct: 475 DGYINSFVTGKKVSEE 490 >gi|254786601|ref|YP_003074030.1| exodeoxyribonuclease VII large subunit [Teredinibacter turnerae T7901] gi|237684242|gb|ACR11506.1| exodeoxyribonuclease VII, large subunit [Teredinibacter turnerae T7901] Length = 453 Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats. Identities = 151/504 (29%), Positives = 240/504 (47%), Gaps = 55/504 (10%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 N+ SV+EL+ + ++E +L + V GE+S SSGH YF+LKD +++ Sbjct: 4 PHSNTPTREIISVAELNRRARSLLELHLPLLWVEGEVSNL-SRPSSGHWYFTLKDAAAQV 62 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +++ + F P+ G + +V + + + G YQ+IIE + +G G L E K Sbjct: 63 RCAMFRNRNALVRFSPKSGDKVVVRARTSIYEGRGDYQLIIEHMEDAGFGLLQRQFEALK 122 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQG 183 +KL +GLF+ +HK P+P +P+ IAVITSP+GA I+D+L + RFP V + PV VQG Sbjct: 123 QKLAGDGLFAPEHKRPLPVLPQHIAVITSPSGAAIQDVLSVLKRRFPATMVTVLPVAVQG 182 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + K+I +A+ N D+I+L RGGGSIEDLW FN E + AI +S +P+ Sbjct: 183 EGSAKQIIDALRTANQ------SNHFDVILLCRGGGSIEDLWSFNSEALAHAIFDSKLPV 236 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +SA+GHE D+T+AD+ AD+RAPTP+ AAE+ P + SSL +LE R I I Sbjct: 237 VSAVGHEIDFTIADFVADVRAPTPSAAAELLSPDQADYLSSLGHLERRFQRAISAHIGTA 296 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L SL + L + Q L RLD L L + + I + H R + Sbjct: 297 RQQLLSLQRLLRHPGQQLQAWSQRLDHLEIRLHKSWQKKIAADKKQLEHTQQRFLTQTPA 356 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + +++Q + +Q +EQ + +K Sbjct: 357 LKLSRSKQQLTSSEQRLEQAL--------------------------------RRTLKDQ 384 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R++ + +L + NTL+RGY+ ++ + ++ Sbjct: 385 NARMQKAM---------------ALLNIVSPLNTLERGYSITRNAIGEVVRNSDHVNEGE 429 Query: 484 RILINFFDGQANAIVINKAPPKEQ 507 + I G NA V+ + + Q Sbjct: 430 MLNITLHQGALNARVLKSSGTESQ 453 >gi|309378852|emb|CBX22557.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 490 Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 235/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 48 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 106 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 107 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 166 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 167 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTAVQGAGSEFQIAQ 226 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI +IP++S +GHETD Sbjct: 227 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 280 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 281 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 340 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ RQ Sbjct: 341 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNVRAHTARFERQTQALQHCRP--DVSVYRQD 398 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I Q + + +L R+ Sbjct: 399 IDRFQTTLSHAFR--------------QLLARRRQS------------------------ 420 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 421 ---------LAAQASLLEAVSPQHILERGFSVVKNTRGQVICNTDVLKQGQKLHITFADG 471 Query: 493 QANAIVINKA 502 + + V + Sbjct: 472 ETDVRVSKEQ 481 >gi|254427126|ref|ZP_05040833.1| exodeoxyribonuclease VII, large subunit [Alcanivorax sp. DG881] gi|196193295|gb|EDX88254.1| exodeoxyribonuclease VII, large subunit [Alcanivorax sp. DG881] Length = 448 Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats. Identities = 140/498 (28%), Positives = 230/498 (46%), Gaps = 56/498 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S S+S+L+ + ++ES+ + ++GE+S +SGH YFSLKD ++I+ + Sbjct: 4 SSRAEPLSISQLNLDAQGLLESSFPLIWLQGELSNL-SRPASGHWYFSLKDTRAQINGAM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F P+ G + LV K+T + +QI++E + P+G G L + K +L Sbjct: 63 FRNRNRLLDFAPQNGQQVLVRAKVTLYVPRGNFQIVVEHMEPAGQGALKAQFDALKAQLQ 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K +P P I VITSP+GA IRDILQ + R P + V+I+P VQG + P Sbjct: 123 SEGLFAQDRKQALPAWPSQIGVITSPSGAAIRDILQVLQRRCPSIPVVIYPAAVQGADAP 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 ++ A+ T E D++I+ RGGGS+EDLW FNDE + RA+A IPI+SA+ Sbjct: 183 AQLRQALGLAVTRNE------CDVLIIGRGGGSLEDLWAFNDEALTRAVAECPIPIVSAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D L D+AADLRAPTP+ AAE+ P + L L RL + + ++ L Sbjct: 237 GHEVDTGLTDFAADLRAPTPSAAAELVSPDLSVVSQRLAGLHRRLRWAMAQQLRTPQERL 296 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L + Q L S RLD L L+ ++ + R+ + Sbjct: 297 RHLSQRLRSPRQHLEQSSQRLDELHNRLQRQMQHRLTLLQGRLQPSQQRLARLSPERLLL 356 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 +Q + + + Q +++ ++ ++ Sbjct: 357 DRQQQLAALNKRLPQPIQRQIQQQQVQ--------------------------------- 383 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 ++ ++ LQ+ + TL RGY+ ++ + L + Sbjct: 384 --------------LAGLSKRLQTASPLETLARGYSITFKGDD-AVRSVSQLQPGDTLTT 428 Query: 488 NFFDGQANAIVINKAPPK 505 DG+ A V + Sbjct: 429 RLVDGEVTARVEHVQESD 446 >gi|149181860|ref|ZP_01860349.1| exodeoxyribonuclease VII large subunit [Bacillus sp. SG-1] gi|148850399|gb|EDL64560.1| exodeoxyribonuclease VII large subunit [Bacillus sp. SG-1] Length = 449 Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats. Identities = 141/503 (28%), Positives = 255/503 (50%), Gaps = 60/503 (11%) Query: 10 LDHPEY-SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 ++ P+Y ++ L+ ++K + +LS + ++GEIS ++ HSSGH YF+LKD +RI A Sbjct: 1 METPQYLTIQALTKYIKRKFDKDPHLSGIYLKGEISNFK-RHSSGHMYFTLKDEKARILA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ ++F PE G++ LV G I+ + +YQI ++ + P G G L A ++ K+K Sbjct: 60 VMFSSANASMKFNPENGMKVLVRGDISVYEAGGQYQIYVKEMQPDGIGDLFLAYQQLKEK 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L ++GLF+D K P+P P+ I VITSPTGA +RDI+ I R+P+ ++++P VQG+ Sbjct: 120 LEKQGLFNDGRKRPLPKFPRKIGVITSPTGAAVRDIITTIERRYPIAEILVYPALVQGER 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K +A+ I + N D++I+ RGGGSIE+LW FN+E + AI+ SSIP+IS Sbjct: 180 ASKSVADCIKKAN------DNKGIDVLIVGRGGGSIEELWAFNEERVALAISESSIPVIS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD+T+AD+AAD+RAPTPT AAE+AVP + L +++ + L + + + + Sbjct: 234 AVGHETDFTIADFAADMRAPTPTAAAELAVPHIDDLLERVLSRKVMLIRGMKARLNTEKS 293 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L S+ ++ N + +DRL +L + + + H+ + ++ Sbjct: 294 RLKSVSSSIVFRNPRRLYEQKIEAVDRLTEKLNRTQHLRMQTQRDKLAHLNSSLRRVHPG 353 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 ++ + L ++H++ Sbjct: 354 RLWEQKNEEYLRMEKHLQVQFL-------------------------------------- 375 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + +K + S T L++ + + RGY+ + + + K + Sbjct: 376 ---------NILKQKQSDFSKTISTLEALSPLKVMDRGYSLVYSQDEKLVKTKEVVKEGE 426 Query: 484 RILINFFDGQANAIVINKAPPKE 506 ++ ++ DG+ + + + + Sbjct: 427 KVTVHLQDGKLHCRIDSIEESES 449 >gi|268589341|ref|ZP_06123562.1| exodeoxyribonuclease VII, large subunit [Providencia rettgeri DSM 1131] gi|291315367|gb|EFE55820.1| exodeoxyribonuclease VII, large subunit [Providencia rettgeri DSM 1131] Length = 455 Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats. Identities = 136/508 (26%), Positives = 236/508 (46%), Gaps = 57/508 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++ YSVS+L+ ++ +++S + + + EIS + SSGH Y +LKD+ +++ A Sbjct: 2 STSQNNAIYSVSKLNQTVRELLDSQMGRIWLTAEISNF-SQPSSGHWYLTLKDDRAQVRA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++G ++ F P+ G + LV +T + YQ+I+ES+ P+G G L E K+ Sbjct: 61 AMFRGQNARVTFRPQNGQQVLVRATVTLYEPRGDYQLILESMQPAGEGLLQQRFELLKQT 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L +GLF HK P+P K + +ITS TGA + DIL + R P L +II+P VQG+ Sbjct: 121 LSAQGLFDIIHKKPLPSPAKSVGIITSATGAALHDILNILRRRDPSLPIIIYPTAVQGEL 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +IA I N +E D++I+ RGGGS+EDLW FN+E++ RAI S +PIIS Sbjct: 181 APAQIARMIELANLRQE------CDVLIVGRGGGSLEDLWAFNEEIVARAIFASQLPIIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+ADY AD+RAPTP+ AAE+ + + L + + L + + + Sbjct: 235 AVGHETDVTIADYVADVRAPTPSAAAELVSRNQLEMLRQLKSAQQHLEMAMDYYVAGQQQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R L ++L ++ + F + R+ + L Sbjct: 295 RFARLHHRLQQQHPQLRLARQYNQLNLLQQKLAQSMTRQLQNSTAKFERVNRRLLQNDLR 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +QK ++ + + Q H++ + Sbjct: 355 PQLQKQQRQLQQTQYHLQNM---------------------------------------- 374 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ + S ++ +++ + TL RG++ + + + + Sbjct: 375 -------ITSLVNSYRQRFAVACSKMEAVSPLATLARGFSISETAEGTVLKKTSQVKLGQ 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511 + DG + + + K + K Sbjct: 428 PLKTRLNDGWVESQITHIEKVKTKRVSK 455 >gi|82702159|ref|YP_411725.1| exodeoxyribonuclease VII, large subunit [Nitrosospira multiformis ATCC 25196] gi|82410224|gb|ABB74333.1| Exodeoxyribonuclease VII large subunit [Nitrosospira multiformis ATCC 25196] Length = 447 Score = 355 bits (912), Expect = 8e-96, Method: Composition-based stats. Identities = 134/488 (27%), Positives = 225/488 (46%), Gaps = 57/488 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVSEL+ + K ++E V GEIS + SGH YFSLKD +++ ++++ Sbjct: 15 SVSELNRNAKELLEQAFPLSWVAGEISNIKCY-GSGHWYFSLKDEIAQVRCVMFREKNQY 73 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 +++ P +G+ V +T + +Q+ IE++ +G G+L A E+ K +L +EGLF Sbjct: 74 LDWQPRDGMRVEVRALVTLYHARGDFQLNIETIRHAGLGSLFEAFEQLKARLGKEGLFDS 133 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P PK I +ITSP A + D+L + R P + +I++P VQG IA AI Sbjct: 134 ERKKPLPEFPKQIGIITSPAAAALHDVLSTLQRRMPSVPIIVYPTIVQGAGASVRIAGAI 193 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + E D++IL RGGGS+EDLW FN+E++ RAIA SIPI+S +GHETD+T Sbjct: 194 QTAASRAE------CDVLILCRGGGSLEDLWAFNEEVVARAIAACSIPIVSGVGHETDFT 247 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+ AD+RAPTPTGA+++ P + + L R+ + R I+ ++ + L L Sbjct: 248 IADFVADVRAPTPTGASQLVCPDRAEVARCGEILRGRMYRAMQRRIESRMQHTDMLGCRL 307 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + + +L RL LE ++ + R+K + RQ Sbjct: 308 VHPGKRIEAQLAQLARLRERLESAWLRHAKERHWRLRELQQRMKIARPDIPRLEGRQQ-- 365 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + +++ + + + + + + A Sbjct: 366 QLGLRLQRAIASRIETLGMHLQRREAN--------------------------------- 392 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 L + L RGY+ ++ + + + I + F G + Sbjct: 393 --------------LSHLNPDSVLARGYSIAYTSDGTVLRRNDQVDVGDVIRVTFAKGWS 438 Query: 495 NAIVINKA 502 A V+ K Sbjct: 439 KASVMEKG 446 >gi|320322910|gb|EFW79000.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. glycinea str. B076] gi|320329967|gb|EFW85955.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 459 Score = 355 bits (912), Expect = 8e-96, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 239/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS + +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNF-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKIALPVHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + +L RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARRLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQAQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|89099253|ref|ZP_01172131.1| exodeoxyribonuclease VII large subunit [Bacillus sp. NRRL B-14911] gi|89086099|gb|EAR65222.1| exodeoxyribonuclease VII large subunit [Bacillus sp. NRRL B-14911] Length = 446 Score = 355 bits (912), Expect = 8e-96, Method: Composition-based stats. Identities = 157/492 (31%), Positives = 240/492 (48%), Gaps = 57/492 (11%) Query: 15 YSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V L+ ++K + +L + V+GEIS ++ HSSGH YF+LKD SRI A+++ + Sbjct: 7 LTVGALTLYIKRKFDHDPHLQEIFVKGEISNFK-RHSSGHMYFTLKDEKSRILAVMFSRS 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++F PE G++ L+ G+I+ + S +YQI ++ + P G G L A E+ K++L +EGL Sbjct: 66 ARSVKFEPENGMKVLISGEISVYEPSGQYQIYVKQMQPDGVGDLFLAFEQLKERLQKEGL 125 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F+ + K PIP PK + VITSPTGA +RDI+ I RFP+ ++I+P VQG + +A Sbjct: 126 FASERKRPIPKFPKTVGVITSPTGAAVRDIITTIKRRFPIANILIYPALVQGAQAAPSVA 185 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N E D++I+ RGGGSIE+LW FN+E + RAI S IP+ISA+GHET Sbjct: 186 GAIELANLQAEA------DVLIVGRGGGSIEELWAFNEEQVARAIVGSDIPVISAVGHET 239 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+AAD RAPTPTGAAEMAVP + L R+ N RLI+ Sbjct: 240 DFTIADFAADHRAPTPTGAAEMAVP-------HIDELAERILNRQSRLIRAMRERAV--- 289 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R RL RL + ++ Q Sbjct: 290 -----------LQRERLGRLQKSYAFRYPQRLYE-------------------------Q 313 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR-IEFI 430 + + + EQ+ K R L+++E+ +L L N ++ +R + Sbjct: 314 KLEQADKMTEQLKKSAGRLAELKREERDRLLQRLLRNHPNDLYKEAKETHLRGSRALGRA 373 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + S L++ + + RGY+ + + + + Sbjct: 374 MKEVLTKKQKEFSGMVSTLEALSPLKIMDRGYSLAYSGEGELLKSVSQVEKGDDVQVKLA 433 Query: 491 DGQANAIVINKA 502 DG N V K Sbjct: 434 DGTFNCKVTGKE 445 >gi|330975916|gb|EGH75982.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 459 Score = 355 bits (911), Expect = 9e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 240/500 (48%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKRADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQLRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ + V + Sbjct: 428 TGQRLTARLGEGELHVRVED 447 >gi|330969058|gb|EGH69124.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. aceris str. M302273PT] Length = 459 Score = 355 bits (911), Expect = 9e-96, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 239/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQLRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDVLAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ + V + Sbjct: 428 TGQRLTARLGEGELHVRVED 447 >gi|325134401|gb|EGC57046.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis M13399] Length = 451 Score = 355 bits (911), Expect = 1e-95, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI + ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIESCTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADMRAPTPTGAAELVSPNRQESLHRLAQAQCRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F +K ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 K I T + ++ Sbjct: 356 ------------------------------------CKKNIDRFQTALSHAFHQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|88706903|ref|ZP_01104602.1| exodeoxyribonuclease VII large subunit [Congregibacter litoralis KT71] gi|88698825|gb|EAQ95945.1| exodeoxyribonuclease VII large subunit [Congregibacter litoralis KT71] Length = 451 Score = 355 bits (911), Expect = 1e-95, Method: Composition-based stats. Identities = 138/496 (27%), Positives = 235/496 (47%), Gaps = 49/496 (9%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 ++ S S+L+ + ++ES+ S+V + GE+S + SSGH YF+LKD+ +++ Sbjct: 2 PSTTVAADVLSPSQLNRQARSLLESHFSYVWIEGELSNF-ARPSSGHWYFTLKDDKAQVR 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++K ++ F P G + V +++ + G ++Q+I E L P+G+G L E + Sbjct: 61 CAMFKTYNQRLRFSPNNGDQVRVRARVSLYEGRGEFQLIGEFLEPAGAGALQARFEALRD 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF +K P+P +AVITSPTGA ++DILQ ++ R P +RV I PV VQG Sbjct: 121 QLRAEGLFDAANKQPLPRSVNHLAVITSPTGAALQDILQVLARRNPSIRVTILPVAVQGT 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + P EI A+ + N R D +I+ARGGGS+EDLW FNDE + R I S +P++ Sbjct: 181 DAPGEIRQALQEANEYARSRYDCDFDAVIIARGGGSLEDLWAFNDEALAREIVASKLPVV 240 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 S +GHE D T+AD+AAD+RAPTP+ AAE+ + L + L + RL+ ++ ++ + Sbjct: 241 SGVGHEVDVTIADFAADVRAPTPSAAAELLSEDRVELIARLAEAQKRLHRAMVHRLERER 300 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ + L + L RLD L L ++ + + R+ S + Sbjct: 301 MNLDRMRARLKHPGDRLREQAQRLDELENRLNRAIKQRLAQLQHAQQARRERLLSHSPLR 360 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +R+ + ++ +E + Q L + + + Sbjct: 361 RLTISREKVARQKAALEAAMAQKLAWHRQGLERR-------------------------- 394 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++L+S L+RGY I D + ++ + Sbjct: 395 ---------------------EQVLKSLNPLAILERGYAIISDAQGGVVRASDAVSPEQV 433 Query: 485 ILINFFDGQANAIVIN 500 + G+ V + Sbjct: 434 LEARLARGRLKLRVES 449 >gi|289626142|ref|ZP_06459096.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649048|ref|ZP_06480391.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. aesculi str. 2250] gi|330869566|gb|EGH04275.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 459 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|331009196|gb|EGH89252.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 459 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 137/500 (27%), Positives = 237/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + +L L + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRGLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|253701626|ref|YP_003022815.1| exodeoxyribonuclease VII large subunit [Geobacter sp. M21] gi|259646293|sp|C6E2U7|EX7L_GEOSM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|251776476|gb|ACT19057.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. M21] Length = 458 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 152/515 (29%), Positives = 250/515 (48%), Gaps = 61/515 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F ++ +VS L+ ++ ++E N V V GEIS SGH YF+LKD Sbjct: 1 MQLFKERR-----VLTVSALTALVRGLLEENFEQVWVEGEISNL-ACPQSGHCYFTLKDA 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I ++++G ++F P +G+ L G++T F +YQ++ + L P G G L A Sbjct: 55 GAQIRCVMFRGAFRSLKFTPRDGMRILTRGRLTLFEPRGEYQLVADYLEPQGIGGLQMAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 + K+KL +EGLFS+ HK IP +P+ I ++TSPTGA IRDIL ++ RF + ++I PV Sbjct: 115 IQLKEKLAKEGLFSELHKIEIPKLPRRIGIVTSPTGAAIRDILTVLNRRFTNVELLISPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +EIA+AI LN D++I+ RGGGS+EDLW FN+E++ RAI S Sbjct: 175 RVQGEGAAREIADAIDDLNR------VGNIDVMIVGRGGGSLEDLWAFNEEVVARAIHRS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P+ISA+GHE D+T+AD+ ADLRA TP+ AAE+ V K+ L + + L RL+ R Sbjct: 229 KVPVISAVGHEIDFTIADFVADLRAATPSAAAELVVASKKELTAEVEALSHRLHVSQQRR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ + +L +A+ + + L R+D L L +I+ + R+ Sbjct: 289 LERSRALVTALSRAITDPSRVLGHLAQRVDSLDARLVREAGLILDDASERIVTLTARLSR 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +++ + + ++ Sbjct: 349 QTPALTLKRWEERLATLSLRLD-------------------------------------- 370 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478 ++ ++ SV + T L + + TL RGY+ + + +T R Sbjct: 371 ---------HAMTRRLACAAESVGLATGTLNAVSPLATLSRGYSITRKLPARSVVTSSRQ 421 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 LA R+ ++F G A V + + T + Sbjct: 422 LAPGDRVEVSFAAGSALCTVEQASRESDSLTAPPR 456 >gi|219870633|ref|YP_002475008.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis SH0165] gi|219690837|gb|ACL32060.1| exodeoxyribonuclease VII large subunit [Haemophilus parasuis SH0165] Length = 442 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 137/495 (27%), Positives = 239/495 (48%), Gaps = 57/495 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + + ++S+L+Y +K ++E V + GEIS + SGH Y +LKD +++ ++ Sbjct: 1 MKNHILTISQLNYSVKQMLEVEFGSVWLIGEISNF-SQPVSGHWYLTLKDEQAQVRCAMF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F P+ G++ LV ++ + YQ+IIE++ P+G G L E+ K KL Sbjct: 60 RMKNMRVNFRPQNGMQVLVRANVSLYEPRGDYQVIIETMQPAGDGLLQQQFEQLKMKLAG 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 GLF+ +HK PIP K + ++TS +GA ++DIL + R P L ++I+P VQG E Sbjct: 120 LGLFAQEHKKPIPTFVKRVGIVTSSSGAALQDILHILQRRDPTLEIVIYPTLVQGKEATA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I I N +E D++I+ RGGGS+EDLW FN+E + AI +S IPIISA+G Sbjct: 180 DIVQMIELANRRQE------CDVLIVGRGGGSLEDLWCFNEEAVAWAIYHSQIPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+ ++ L L + ++N RL K+ + Sbjct: 234 HETDVTIADFVADLRAPTPSAAAELVSRDQQELLRQLQHHADKVNLAFDRLWSEKLARFD 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + + L +L L ++L+ +E ++ RK + + + + R++ + L + I Sbjct: 294 RLQLRLQAQHPQRQLQQRVQQLSHLEKQLKQQMEQLLLRKQQCWKNTLQRMERNPLPYRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 QH+ + +Q + +++++ Sbjct: 354 SAQTQHLHKLEQRLSYAIEKNISQR----------------------------------- 378 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 L + L RGY+ Q+ + +++A I+ Sbjct: 379 ------------RQQFQTLCTQLDGLSPLAILARGYSVTQNQQGKALLSTQDIAIGETIV 426 Query: 487 INFFDGQANAIVINK 501 G+ + V++ Sbjct: 427 TRLAQGKVVSQVVSI 441 >gi|298368896|ref|ZP_06980214.1| exodeoxyribonuclease VII, large subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298282899|gb|EFI24386.1| exodeoxyribonuclease VII, large subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 451 Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats. Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 62/507 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S+ SVSEL+ K ++E +L+ + + GE+S +SGH YFSLKD+ Sbjct: 1 MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ +EG V GKI+ + ++QI + + G G L A Sbjct: 55 RAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L EG F+ + K P+P P+ I ++TS A +RD++ + R P + VI++P Sbjct: 115 ERLKTQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +IA AI + E D++I+ RGGGSIEDLW FN+E +VRAI Sbjct: 175 AVQGTGSEFQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAKGRLKTVLEQR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L+ L + + + Q L R + +L + L +++ + F +K Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDEQRTYIHKLAQTLSYSMTQNVRAHTARFERQTQALKH 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ + + + R + +++ Sbjct: 349 CRPDISVYRQDI------NRFQTTLSHAFRQLLAHRRQ---------------------- 380 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 S+ T +L++ + + L+RG++ +++T I L Sbjct: 381 ---------------------SLMAQTALLEAVSPQQILERGFSVVKNTRGQVIRNANVL 419 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 ++ I F DG+ + V + +E Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQRE 446 >gi|319651491|ref|ZP_08005619.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. 2_A_57_CT2] gi|317396806|gb|EFV77516.1| exodeoxyribonuclease 7 large subunit [Bacillus sp. 2_A_57_CT2] Length = 446 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 150/497 (30%), Positives = 241/497 (48%), Gaps = 59/497 (11%) Query: 11 DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +V+ L+ ++K + +L ++ V+GEIS ++ HSSGH YF+LKD +RI A++ Sbjct: 3 EQQYLTVNALTKYIKRKFDADPHLQNILVKGEISNFK-QHSSGHMYFTLKDEKARILAVM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + G ++F PE G++ LV G I+ + S +YQI ++ + P G G L A E+ K+KL Sbjct: 62 FAGNARTMKFRPENGMKVLVRGAISVYESSGQYQIYVQEMQPDGIGELYLAYEQLKEKLE 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 +EG FS HK IP PK +AVITSPTGA IRDIL + R+P+ ++I+P VQG++ Sbjct: 122 KEGFFSPAHKKDIPRYPKTVAVITSPTGAAIRDILTTLKRRYPIANILIYPALVQGNQAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI + NT ++ D++I+ RGGGSIE+LW FN+E + RAI S IPIISA+ Sbjct: 182 PSIVKAITEANTSRDA------DVLIIGRGGGSIEELWAFNEEAVARAIFKSEIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+ ADLRAPTPTGAAE+AVP + L L N ++RL + + + L Sbjct: 236 GHETDFTIADFVADLRAPTPTGAAELAVPHIDDLTERLFNRQSRLIRAMKEQVALQNERL 295 Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + K+ + +LD++ +L + K + R+ Sbjct: 296 LRVQKSYAFRYPQKLYEQKMEQLDKVTEQLMRGSRRLHDLKLEQAETLQKRLVRSHPGQL 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + +++ + + + Sbjct: 356 KNQAKENNDRLHKLLNR------------------------------------------- 372 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +++ + + + L++ + + RGY+ N I + I Sbjct: 373 ----TMTNILAAKEKDFARVISTLEALSPLKIMDRGYSLAYTENETLIKTVSQVKADDMI 428 Query: 486 LINFFDGQANAIVINKA 502 + DG V + Sbjct: 429 KLKVSDGSIECKVTDIE 445 >gi|15677228|ref|NP_274381.1| exodeoxyribonuclease VII large subunit [Neisseria meningitidis MC58] gi|14194727|sp|Q9JYZ2|EX7L_NEIMB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|7226608|gb|AAF41737.1| exodeoxyribonuclease, large subunit [Neisseria meningitidis MC58] gi|316984170|gb|EFV63148.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis H44/76] gi|325140417|gb|EGC62938.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis CU385] gi|325144502|gb|EGC66801.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis M01-240013] gi|325200016|gb|ADY95471.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis H44/76] Length = 451 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 134/490 (27%), Positives = 234/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K ++E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 VRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI + ++P++S +GHETD Sbjct: 188 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIESCTVPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADMRAPTPTGAAELVSPNRQESLHRLAQAQCRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F +K ++ Sbjct: 302 QIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 K I T + ++ Sbjct: 356 ------------------------------------CKKNIDRFQTALSHAFHQL----- 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 375 --LTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|330985025|gb|EGH83128.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 459 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + +L RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|320539282|ref|ZP_08038952.1| exonuclease VII, large subunit [Serratia symbiotica str. Tucson] gi|320030674|gb|EFW12683.1| exonuclease VII, large subunit [Serratia symbiotica str. Tucson] Length = 466 Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats. Identities = 136/512 (26%), Positives = 230/512 (44%), Gaps = 62/512 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + ++VS L+ ++ ++E + + + EIS + +SGH YF+LKD+ Sbjct: 1 MSLAPPPS-----IFTVSRLNQAVRQLLEMEMGQIWISAEISNF-SQPTSGHWYFTLKDD 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ + + F P+ G + LV IT + YQ+I ES+ P+G+G L Sbjct: 55 CAQVRCAMFRNSNRRTTFRPQNGQQVLVRASITLYELRGDYQLIAESMQPAGNGLLQQQF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 ++ K+ L +EGLF Q K P+P K + VITS +GA + DILQ + R P L +II+P Sbjct: 115 DQLKQHLSDEGLFDPQFKQPLPSPAKCVGVITSASGAALHDILQVLQRRDPSLPIIIYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG++ P ++ AI N E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 175 SVQGEDAPMQMVRAIETANRRDE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI+SA+GHETD T+ D+ ADLRAPTP+ AAE+ + L L + + RL Sbjct: 229 QIPIVSAVGHETDVTIVDFVADLRAPTPSAAAELVSRNQLELVRQLQSQQQRLEMATDYY 288 Query: 300 IKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + L + L+ L +L R LE + + + ++ Sbjct: 289 LVRRQQQFTRIHHRLQQQHPHLRLARLLTLLFKLQRRLEEGTQNQLRMASQRNERAQQQL 348 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + I + +Q + +++ ++Q Sbjct: 349 AQIQPQNRIHRYQQRVQQQEYRLQQ----------------------------------- 373 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 L ++ + + L++ + TL RGY+ Q + + Sbjct: 374 ------------ALDRQLNAYRQRFGMACSQLEAVSPLATLARGYSVTQTPCGELLKSTK 421 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPT 509 R+ DG + V + K + Sbjct: 422 QAQLGERLETRLLDGWIESEVKSITTAKTRDP 453 >gi|238758842|ref|ZP_04620015.1| Exodeoxyribonuclease 7 large subunit [Yersinia aldovae ATCC 35236] gi|238702950|gb|EEP95494.1| Exodeoxyribonuclease 7 large subunit [Yersinia aldovae ATCC 35236] Length = 459 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 141/512 (27%), Positives = 229/512 (44%), Gaps = 57/512 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD+ +++ Sbjct: 2 SQSSASTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ T + F P+ G + LV IT + YQ+I ES+ P+G G L ++ K++ Sbjct: 61 AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF +HK +P + + VITS +GA + D+LQ + R P L VII+P VQG + Sbjct: 121 LATEGLFDQRHKQLLPSPARQVGVITSASGAALHDVLQVLQRRDPSLPVIIYPTAVQGAD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APMQIIRAIQLANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFNSRIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDVTIADFVADLRAPTPSAAAELVSRNQIELVRKIQGQQQRMEMAMDYYLAQRSQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R + +L R LE + + I + R + R+ Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEDSAQNQIRQLSRRTERLQQRLAQVQPQ 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + Q + +++ + Q Sbjct: 355 GQIHRYSQQVQQQEYRLRQ----------------------------------------- 373 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ I L++ + TL RGY+ Q + + + T Sbjct: 374 ------AFERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTPAGVVLKTTKQVQTGD 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLH 515 ++ DG + + K+ +K Sbjct: 428 KLTTRLQDGWVESEITQIDVAKKSRQRKAAKQ 459 >gi|119897758|ref|YP_932971.1| exodeoxyribonuclease VII [Azoarcus sp. BH72] gi|119670171|emb|CAL94084.1| Exodeoxyribonuclease VII [Azoarcus sp. BH72] Length = 459 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 137/506 (27%), Positives = 226/506 (44%), Gaps = 54/506 (10%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +P + SL +VS L+ + ++ES + + V GEIS +SGH YF+LKD Sbjct: 7 SPEASPLSLSAQVLTVSALNRLAREVLESAIPLLWVSGEISNLT-RAASGHLYFTLKDEQ 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +W+ + F PE G+ +T + YQ+ +E+L P+G G L A Sbjct: 66 AQVRCAMWRNRAQLLPFRPENGMRVEARALVTVYEVRGDYQLGVEALRPAGIGNLFEAFT 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K+KL EGLF K P+P P+ I ++TSP A +RD+L + R P L V+++P Sbjct: 126 RLKEKLAAEGLFDTAVKRPLPPYPRGIGIVTSPAAAALRDVLVTLKRRAPQLPVVLYPAP 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + P + L D+++L RGGGSIEDL FNDE + RAI S Sbjct: 186 VQGADAPLR---LVAALEAAAARAAEDGIDLVLLVRGGGSIEDLQAFNDEGLARAIRRSP 242 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P++ +GHETD+T+AD+AADLRAPTPTGAAE+A + ++ L+ L + R + Sbjct: 243 LPVVCGVGHETDFTIADFAADLRAPTPTGAAELASAGFHAARDRVLALDQHLARAMQRRL 302 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L+ L + Q L+ +R +L L R L + R + R++ Sbjct: 303 DTLAQLLDRAALRLVHPRQRLAAARVQLATLERRLHDAGTRQLQRTDERLARLGLRLRGR 362 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ + R + + + + ++ L Sbjct: 363 RP--DLARARADQHQLAARLRRGLDTVMQRHRL--------------------------- 393 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L+ A L RGY+ +D + + + +++ Sbjct: 394 --------------------RLEALQDHLKHLAPDAVLARGYSITRDAHGHILRSVQDIG 433 Query: 481 TKTRILINFFDGQANAIVINKAPPKE 506 + + DG+ +A V PP+ Sbjct: 434 VGDAVSVQLADGRLDAEVTATQPPRP 459 >gi|251796320|ref|YP_003011051.1| exodeoxyribonuclease VII large subunit [Paenibacillus sp. JDR-2] gi|247543946|gb|ACT00965.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. JDR-2] Length = 457 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 151/491 (30%), Positives = 238/491 (48%), Gaps = 60/491 (12%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YS+ +++ +++ +ES+ LS V +RGEIS + HSSGH YF+LKD SR+ I++ Sbjct: 7 IYSIKDINRYIRMKLESDVLLSDVWLRGEISNFTH-HSSGHMYFTLKDKDSRLKCIMFAS 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F+P EG + + G ++ + YQ + ++ P G G+L A E+ K KL EG Sbjct: 66 HNQRLPFIPREGTKVMARGNVSVYERDGNYQFYVTAMQPDGIGSLYLAYEQLKSKLETEG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF++ K PIP P+ I VITSPTGA +RDI+ + R P + + +FPV VQG + I Sbjct: 126 LFAESRKRPIPRFPRAIGVITSPTGAAVRDIITTLQRRHPSIPIYVFPVLVQGTQAAPSI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +N E D++I+ RGGGS+E+LW FN+E + R+IA S IP+ISA+GHE Sbjct: 186 VKAIESMNRFGE------VDVLIVGRGGGSLEELWAFNEEPVARSIAASQIPVISAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ ADLRA TPT AAE+AVP LQ L RL + +++ + L + Sbjct: 240 TDFTIADFVADLRAATPTAAAELAVPHIAELQQQLARQRQRLEQSLRMMVQGRKEQLQRV 299 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + L RLDRL L+H + R + +++ Sbjct: 300 RRSPFFVHPRKYLLDQAQRLDRLQERLQHRTLRLTERGKAKLERLQSQLAGHHPGEQAAF 359 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + +EQ + ++ L R Q ++ I Sbjct: 360 AAKRLQGDVKRLEQAM--------------VSSLKERRLQLQSAI--------------- 390 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487 R L + + + RGY+ + D I ++ + + Sbjct: 391 ------------------RQLDALSPLKVMARGYSLVYDEQEKRLIKSIADVQPGDLVRV 432 Query: 488 NFFDGQANAIV 498 DGQ + V Sbjct: 433 KVADGQLDCHV 443 >gi|322418641|ref|YP_004197864.1| exodeoxyribonuclease VII large subunit [Geobacter sp. M18] gi|320125028|gb|ADW12588.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. M18] Length = 458 Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 153/515 (29%), Positives = 248/515 (48%), Gaps = 61/515 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F ++ +VS L+ ++ ++E N V V GEIS +SGH YF+LKD Sbjct: 1 MQLFKERR-----VLTVSALTALVRGLLEENFDQVWVEGEISNI-ACPTSGHCYFTLKDP 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I ++++G ++F P +G+ ++ G++T F +YQ+ ++++ P G G L A Sbjct: 55 GAQIRCVMFRGAFRTLKFTPRDGMRVILRGRMTLFEPRGEYQLSVDTMEPQGIGGLQLAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 + K++L +EGLFS+ HK IP +P+ I V+TSPTGA IRDIL +S RF + ++I PV Sbjct: 115 IQLKERLAKEGLFSEAHKREIPKLPRRIGVVTSPTGAAIRDILTVLSRRFANVELLIAPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ +EIA AI LN D++I+ RGGGS+EDLW FN+E++ RAI S Sbjct: 175 RVQGEGAAREIAAAIADLNRF------GNVDVMIVGRGGGSLEDLWAFNEEVVARAIHRS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 SIP+ISA+GHE D+T+AD+ ADLRA TP+ AAE+ V K+ L + L L RL +R Sbjct: 229 SIPVISAVGHEVDFTIADFVADLRAATPSAAAELVVRSKKELTAELEALTHRLEVSQLRR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ + + +A+ + + L R+D L L +I+ + R+ Sbjct: 289 LERSRALVTAFGRAITDPSRILGHLAQRVDSLDARLVREAGLILDDASERIVTLSARLAR 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +++ + + ++ Sbjct: 349 QSPALTLRQTAERLSTLSLRVD-------------------------------------- 370 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRN 478 ++ ++ SV T L + + TL RGY+ + IT R Sbjct: 371 ---------HAMTRRLACAAESVWRATGTLNAVSPLATLSRGYSIARKLPGRSVITSSRQ 421 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 +A R+ ++ G A V E T + Sbjct: 422 IAPGDRLELSLAAGSALCTVDETRAESESLTAPER 456 >gi|299537765|ref|ZP_07051054.1| exodeoxyribonuclease 7 large subunit [Lysinibacillus fusiformis ZC1] gi|298726744|gb|EFI67330.1| exodeoxyribonuclease 7 large subunit [Lysinibacillus fusiformis ZC1] Length = 452 Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 148/502 (29%), Positives = 242/502 (48%), Gaps = 60/502 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +V L+ ++K + +L V V+GE+S + IH SGH YF+LKD+ +RI A Sbjct: 2 SSASYLTVKALTKYIKRKFDADPHLREVYVKGELSNVK-IHQSGHIYFTLKDDGARIAAT 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K+ F P+EG++ + G + + G YQ+ ++ + P G G+L A + K++L Sbjct: 61 MFKTAATKLAFEPKEGMQVFIRGDVNVYEGYGTYQLYVQEMQPDGIGSLFVAFNQLKEQL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + K PIP P+ I V+TS TGA IRDI + R+PL ++I+P VQG + Sbjct: 121 QKEGLFKPEWKQPIPKFPEKIGVLTSTTGAAIRDICTTLKRRYPLAEILIYPTLVQGAQA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I + N D++I+ RGGGSIEDLW FN+E++ RAI S IPIISA Sbjct: 181 APNIVQNIQRANQ------EGSCDVLIVGRGGGSIEDLWAFNEEIVARAIFESRIPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+ADY ADLRAPTPT AAEMAVP + L ++ +++L+ ++ + + Sbjct: 235 VGHETDTTIADYVADLRAPTPTAAAEMAVPDQADLYQRVLTQKSQLHQMVRSQLMAERQR 294 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN L + L ++ RL +L L+ +++ + +K + + ++ Sbjct: 295 LNKLQQSYPLSMPERLYRPFTERLAQLESGLQAAMQMSLMKKATQLQQLHSTVEQHSPKK 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +++ + + Q + + + Sbjct: 355 ALAFHQRELEARIQQLSRATTYY------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + T R L++ + L RG+T + I + + + Sbjct: 378 ----------VAKQQQQFESTVRTLEALNPLSILTRGFTVAY-KDQQMIKSSTEVQKQDQ 426 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + + F DG+ A V N P E Sbjct: 427 LTLTFHDGKVVAKVTNILPKNE 448 >gi|94501110|ref|ZP_01307633.1| exodeoxyribonuclease VII, large subunit [Oceanobacter sp. RED65] gi|94426686|gb|EAT11671.1| exodeoxyribonuclease VII, large subunit [Oceanobacter sp. RED65] Length = 446 Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 135/493 (27%), Positives = 226/493 (45%), Gaps = 55/493 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +VS+L+ K ++E+ L +V V GEIS SGH YFSLKD +++ + Sbjct: 3 ATQTQPITVSQLNRQSKELLETYLHNVVVTGEISNL-ARPRSGHWYFSLKDERAQVRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +K + F P+EG + ++ ++ + YQ+I+ + +G G L A + KK L Sbjct: 62 FKNRTQFVNFAPKEGDQVIIYASVSLYEARGDYQLIVNKMESAGEGALRAAFDALKKHLF 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +GLF+ ++K +P P+ + VITSPTGA IRD+L + R P L V I+P +VQG + Sbjct: 122 TQGLFNQEYKQALPKHPQHLGVITSPTGAAIRDVLSVLKRRMPSLPVSIYPTQVQGQQAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I AI + N ++ D+IIL RGGGS+EDLW FN+E + AI +S IPIISA+ Sbjct: 182 AQIVAAIERANRDQQ------CDVIILTRGGGSLEDLWPFNEEAVAWAIFHSRIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D +++D+ AD+RA TP+ AAEM + N E L I++ + Sbjct: 236 GHEVDVSISDFVADVRAATPSAAAEMVSMDRFEWLGRFENAERALLRAWSNRIQHWQFRV 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L K + + + L + RLD L +E + R+ H+++R ++ Sbjct: 296 EQLSKRIRHPREKLQENMQRLDMASMRLNTIMEKQLQREQTRVAHLVHRFYQVQPQRQLE 355 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + ++ +K + + R Sbjct: 356 RQKLQLQQLNKRLQLAMK--------------------------------QELNQFKHR- 382 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + +L + + +TL RGY + + I + + I Sbjct: 383 --------------LQNQAEVLNAVSPLSTLGRGYAILTTESGEAIRSSKQVTAGDTIHG 428 Query: 488 NFFDGQANAIVIN 500 G A ++N Sbjct: 429 RLHQGSITATILN 441 >gi|71735259|ref|YP_273589.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|123761312|sp|Q48LY3|EX7L_PSE14 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|71555812|gb|AAZ35023.1| exodeoxyribonuclease VII, large subunit [Pseudomonas syringae pv. phaseolicola 1448A] Length = 459 Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 137/500 (27%), Positives = 238/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + L+ +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLEREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKIALPVHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + +L RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLGFLRQRLDALAERLPRAIREQIKARRLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQAQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|197117643|ref|YP_002138070.1| exodeoxyribonuclease VII large subunit [Geobacter bemidjiensis Bem] gi|226736762|sp|B5EI10|EX7L_GEOBB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|197087003|gb|ACH38274.1| exodeoxyribonuclease VII, large subunit [Geobacter bemidjiensis Bem] Length = 458 Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 153/515 (29%), Positives = 249/515 (48%), Gaps = 61/515 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F ++ +VS L+ ++ ++E N V V GEIS SGH YF+LKD Sbjct: 1 MQLFKERR-----VLTVSALTALVRGLLEENFEQVWVEGEISNL-ACPQSGHCYFTLKDV 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I ++++G ++F P +G+ L G++T F +YQ++ + L P G G L A Sbjct: 55 GAQIRCVMFRGAFRSLKFTPRDGMRILTRGRLTLFEPRGEYQLVADYLEPQGIGGLQMAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 + K+KL +EGLFS+ HK IP +P+ I V+TSPTGA IRDIL ++ RF + ++I PV Sbjct: 115 IQLKEKLAKEGLFSELHKREIPKLPRRIGVVTSPTGAAIRDILTVLNRRFTNVELLISPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQGD +EIA+AI LN D++I+ RGGGS+EDLW FN+E++ RAI S Sbjct: 175 RVQGDGAAREIADAIDDLNR------VGNLDVMIVGRGGGSLEDLWAFNEEVVARAIHRS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P+ISA+GHE D+T+AD+ ADLRA TP+ AAE+ V K+ L + + L RL+ R Sbjct: 229 KVPVISAVGHEIDFTIADFVADLRAATPSAAAEIVVASKKELTAEVEALTHRLHVSQQRR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ + +L +A+ + + L R+D L L +I+ + R+ Sbjct: 289 LERSRALVTALSRAITDPSRFLGHLAQRVDSLDARLTREAGLILDDASERIVTLTARLSR 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +++ + + ++ Sbjct: 349 QTPALTLKRWEERLATLSLRLD-------------------------------------- 370 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478 ++ ++ S+ + T L + + TL RGY+ + + +T R Sbjct: 371 ---------HAMTRRLAVAAESIGLATGTLNAVSPLATLSRGYSITRKLPARSVVTSSRQ 421 Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 LA R+ ++F G A V + T + Sbjct: 422 LAPGDRVEVSFAAGSALCTVEQAHKDSDSLTAPPR 456 >gi|255065567|ref|ZP_05317422.1| exodeoxyribonuclease VII, large subunit [Neisseria sicca ATCC 29256] gi|255050392|gb|EET45856.1| exodeoxyribonuclease VII, large subunit [Neisseria sicca ATCC 29256] Length = 449 Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 62/507 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S+ SVSEL+ K ++E +L+ + + GE+S +SGH YFSLKD+ Sbjct: 1 MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ +EG V GKI+ + ++QI + + G G L A Sbjct: 55 RAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L EG F+ + K P+P P+ I ++TS A +RD++ + R P + VI++P Sbjct: 115 ERLKAQLQAEGAFAAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +IA AI + E D++I+ RGGGSIEDLW FN+E +VRAI Sbjct: 175 AVQGAGSEFQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAKGRLKTVLEQR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L+ L + + + Q L R + +L + L +++ + F +K Sbjct: 289 YFDVSQKLDWLARQIRHPRQKLGEQRTYIRKLAQTLSYSMTQNVRAHTARFERQTQALKH 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ + + + R + ++ Sbjct: 349 CRPDISVYRQDI------NRFQTTLSHVFRQLLAHRR----------------------- 379 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 S++ T +L++ + + L+RG++ +++T I L Sbjct: 380 --------------------QSLTAQTALLEAVSPQQILERGFSVVKNTRGQVIRNADVL 419 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 ++ I F DG+ + V + +E Sbjct: 420 KQGQKLHITFADGETDVRVTKEQAQRE 446 >gi|238921025|ref|YP_002934540.1| exodeoxyribonuclease VII large subunit [Edwardsiella ictaluri 93-146] gi|259646289|sp|C5BER7|EX7L_EDWI9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|238870594|gb|ACR70305.1| exodeoxyribonuclease VII, large subunit, putative [Edwardsiella ictaluri 93-146] Length = 460 Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats. Identities = 139/503 (27%), Positives = 229/503 (45%), Gaps = 57/503 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E + + + EIS +SGH YF+LKD+ +++ +++ + Sbjct: 9 IFTVSRLNQTVRQLLELEMGQIWLSAEISNL-SQPASGHWYFTLKDDKAQVRCAMFRNSN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P+ G + LV IT + YQ+I ES+ P+G G L E K++L EGLF Sbjct: 68 RRVTFRPQNGQQVLVRASITLYESRGDYQLIAESMQPAGDGLLQQQFEALKQRLQAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 HK P+P + + VITS +GA + D+L + R P L V+I+P VQG E P ++ Sbjct: 128 DVGHKQPLPSPARCVGVITSTSGAALHDVLHVLRRRDPALPVVIYPSAVQGGEAPGQLVR 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHETD Sbjct: 188 AIALANLRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASHIPIVSAVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 ++AD+ ADLRAPTP+ AAE+ ++ L L++ RL+ + + + L L Sbjct: 242 VSIADFVADLRAPTPSAAAEVVSRNRDELLRRLLSQRQRLDMALDYTLARRRQRLQQLRH 301 Query: 313 ALPNSDQTLSCSRY--RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L +R RL L R LE ++ + R + R++ H +++ + Sbjct: 302 RLEQQHPQLRLARQQARLLSLHRRLEEAIDTQLRLAERRWRLGGERLQQRSPAHALRQQQ 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 H+ + +E Sbjct: 362 YHLQQLSHRLE-----------------------------------------------SQ 374 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L + + L+ + TL RG++ Q + + + +A + Sbjct: 375 LQRSVAARRERFGALCSRLEGMSPLATLARGFSVTQRDDGQLLRHREQVAPGDTLRTRLE 434 Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513 DG + V P + + + Sbjct: 435 DGWVESQVTATRPLTARRPRGTK 457 >gi|308069600|ref|YP_003871205.1| exodeoxyribonuclease VII large subunit (exonuclease VII large subunit) [Paenibacillus polymyxa E681] gi|305858879|gb|ADM70667.1| Probable exodeoxyribonuclease VII large subunit (Exonuclease VII large subunit) [Paenibacillus polymyxa E681] Length = 454 Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 148/495 (29%), Positives = 233/495 (47%), Gaps = 60/495 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + YS+ +L+ +++ +ES+ LS V +RGEIS + HSSGH YF+LKD SRI +I Sbjct: 2 AEQRIYSIKDLNRYIRMKLESDQVLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRSI 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ ++ F+P+EG + G ++ + +YQ + P G G+L A E+ K+KL Sbjct: 61 MFATHNQRLPFVPKEGTRVIARGNVSVYERDGQYQFYATQMQPDGIGSLYLAYEQLKQKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF K +P P I VITSPTGA +RDI+ + R+P ++++PV VQG Sbjct: 121 DAEGLFDTARKRNLPAHPATIGVITSPTGAAVRDIITTLQRRYPQAGIVLYPVLVQGKGA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI +N ++E ++I+ RGGGS+E+LW FN+E + RAI S IP+ISA Sbjct: 181 APSIIKAIEAMNRMQE------VQVMIVGRGGGSLEELWAFNEEAVARAIYASVIPVISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRA TPT AAE+AVP + L+ L+ E RL N + + ++ Sbjct: 235 VGHETDFTIADFVADLRAATPTAAAELAVPNQAELRDQLLQREQRLRNALRQRLETSRER 294 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + L + + + R+D L + L + ++ Sbjct: 295 LARLQRSPVLLHPRRYMLQHAERMDMLHQRLIRAAGNRSHLNAEKNARMRQVLERFNPRE 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ R+ Q+ +E Sbjct: 355 QIRSARKQTDMAQRQLESA----------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKT 483 + K+ + R L + + + RGY+ + D I +++ Sbjct: 374 ------MRAITKTGRQQLHTGIRQLDALSPLKVMARGYSLVYDEQEKRLIKSLKDVQPGD 427 Query: 484 RILINFFDGQANAIV 498 I I DGQ + V Sbjct: 428 SIKIKVSDGQLDCQV 442 >gi|302185734|ref|ZP_07262407.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. syringae 642] Length = 459 Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 240/500 (48%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L +E + ++ H+ +R+ + Sbjct: 295 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAVEQNMHQRQVRLAHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L+ + TL RGY+ + D + I Sbjct: 391 -----------------------SQVQTLKVVSPLATLGRGYSIMLDERGHAIRNAAQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTARLGEGELQVRVED 447 >gi|297568698|ref|YP_003690042.1| exodeoxyribonuclease VII, large subunit [Desulfurivibrio alkaliphilus AHT2] gi|296924613|gb|ADH85423.1| exodeoxyribonuclease VII, large subunit [Desulfurivibrio alkaliphilus AHT2] Length = 446 Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats. Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 55/498 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 +N D+ +VSEL+ ++ ++E++ S V V GEIS R SSGH YF+LKD +++ A Sbjct: 2 ENPFDNRIQTVSELTRSIRGLLETSYSMVTVTGEISNLR-RPSSGHLYFTLKDADAQLRA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++++ + P +G+E L G+I+ + +YQ+II+ + G+G L A ++ K K Sbjct: 61 VLFRAQQRYLACTPADGLEVLCRGRISVYEPRGEYQLIIDFMDGKGAGLLRIAFDRLKAK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDE 185 L EGLF+ + K P+PF+PK IA++TSP GA +RD L + + R P + I PV+VQGD Sbjct: 121 LEAEGLFAPERKRPLPFLPKSIALVTSPQGAAVRDFLTQAAKRCPATAISIMPVRVQGDG 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 EIA AI +LN L R D+I+L RGGGS+EDLW FN+E + RA+A S IP++S Sbjct: 181 AAAEIAQAIARLNQLA------RWDVIVLCRGGGSLEDLWAFNEEELARAVAASEIPVVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D+T+AD+ ADLRAPTPT AA+M +P +E L ++ RL + R ++ Sbjct: 235 AVGHEVDFTIADFVADLRAPTPTAAAQMVLPDQEALAGAINEFNRRLAATLRRQLQEARQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + + L + + L+ RLD L EL H L + R N ++ Sbjct: 295 KLLAGQRLLGDPSRLLAQHHLRLDHLQAELGHGLRYHLHRCQERLNRFQAILQQRDPRRE 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + R + + Sbjct: 355 LARQRDRLQAGVMRL--------------------------------------------- 369 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 F ++ + + IL + + L RGY + T+ + R + Sbjct: 370 --NFTINSIMVEKRNHLGRNAAILDAVSPLAVLGRGYAIARRTDGTVLRSARQAEIDEEL 427 Query: 486 LINFFDGQANAIVINKAP 503 + DGQ + V P Sbjct: 428 SLILHDGQLSCNVKQIKP 445 >gi|221314677|ref|ZP_03596482.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|255767540|ref|NP_390310.2| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. subtilis str. 168] gi|251757275|sp|P54521|EX7L_BACSU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|225185168|emb|CAB14361.2| exodeoxyribonuclease VII (large subunit) [Bacillus subtilis subsp. subtilis str. 168] Length = 448 Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats. Identities = 140/496 (28%), Positives = 240/496 (48%), Gaps = 60/496 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L ++ ++GE+S + IH+ GH YF+LKD ++R+ ++++ Sbjct: 8 TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D++K IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I E D++I+ RGGGSIE+LW FN+E++ RAI S+IPIISA+GHETD Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E R+ + + + K + +L Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D ++ + L ++ RK R R+++ +++ R Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 E+ + + + ++ + Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + + ++RGY+ + I + + R+ I Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEIKLK 432 Query: 491 DGQANAIVINKAPPKE 506 DG V+ K ++ Sbjct: 433 DGVLTCEVLEKRGEEK 448 >gi|118602733|ref|YP_903948.1| exodeoxyribonuclease VII, large subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166232364|sp|A1AX20|EX7L_RUTMC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|118567672|gb|ABL02477.1| exodeoxyribonuclease VII, large subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 466 Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats. Identities = 140/490 (28%), Positives = 237/490 (48%), Gaps = 33/490 (6%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y++S + +E + ++GEIS SGH YFSLKD+ +++ ++++ Sbjct: 7 IYTISNFLFLCNKTIEDKIPTCWLQGEISNLT-RPESGHWYFSLKDSKAQVYCVLFRFNQ 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 I+F P+ G+E LV T + +Q+II+ L P G G L A E+ K KL+ EGLF Sbjct: 66 RHIKFNPKNGMEVLVHVTPTLYKARGNFQLIIQHLEPVGIGNLNLAFEQLKNKLVNEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEIAN 192 + HK P+P I I VI+S TGAVI+DI++ ++ R+P +++F VQG K++ Sbjct: 126 DNIHKKPLPNIINTIGVISSSTGAVIQDIIKVLNNRYPFSDILLFDSMVQGQGSVKKL-- 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 N L + D+II+ARGGGS+EDLW FN+E + RAI +S PIISAIGHETD Sbjct: 184 ----TNALNAADQSGKCDVIIIARGGGSLEDLWAFNEETLARAIFKASTPIISAIGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T++D+ D+ APTP+ AA + P + L ++ L RL+ + + + LN L Sbjct: 240 TTISDFVCDICAPTPSAAAMLVTPDRLELLANTDKLYMRLHQSYQQTLHDYQSVLNQLKL 299 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +P S++ ++ +LD + L ++++ + N I + +K I I+ + Sbjct: 300 RIPISNKQIAFFSQKLDHVSINLNNHVKSTLVLNNAKLNSIFSALKQHSPIEAIKHIKIL 359 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + Q K I ++ + +++ ++ Sbjct: 360 NQVSFAQL-------------------------KHQIKQIININNSALYLANEKLKKAIA 394 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 T++SI L + NTL RG++ + N ++ ++ I DG Sbjct: 395 TLTDKHKTTLSIQANSLHHLSPLNTLSRGFSITTNAKNQILSSITDIKINQAITTQLADG 454 Query: 493 QANAIVINKA 502 + + + Sbjct: 455 KLYSNIKKIE 464 >gi|291484872|dbj|BAI85947.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. natto BEST195] Length = 460 Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats. Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 60/496 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L ++ ++GE+S + IH+ GH YF+LKD ++R+ ++++ Sbjct: 20 TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 78 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 79 ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 138 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D++K IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 139 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 198 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I E D++I+ RGGGSIE+LW FN+E++ RAI S+IPIISA+GHETD Sbjct: 199 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 252 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E R+ + + + K + +L Sbjct: 253 FTISDFVADIRAATPTGAAEIAVPHTTDLIERAKTAEVRMTRAMQQHLGQKKERIQTLQS 312 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D ++ + L ++ RK R R+++ +++ R Sbjct: 313 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 372 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 E+ + + + ++ + Sbjct: 373 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 393 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + + ++RGY+ + I + + R+ + Sbjct: 394 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEVKLK 444 Query: 491 DGQANAIVINKAPPKE 506 DG V+ K ++ Sbjct: 445 DGVLTCEVLEKRGEEK 460 >gi|239997021|ref|ZP_04717545.1| exonuclease VII, large subunit [Alteromonas macleodii ATCC 27126] Length = 454 Score = 353 bits (905), Expect = 6e-95, Method: Composition-based stats. Identities = 130/502 (25%), Positives = 222/502 (44%), Gaps = 58/502 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F+ S +V++L+ + ++E + + + EIS + +SGH YF+LKDN ++ Sbjct: 6 FTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVA-AASGHWYFTLKDNKAQ 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + A ++KG+ + P+EG + LV + + YQ+++E + G G L A E Sbjct: 65 VRAAMFKGSNRNVRIRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQAFEAL 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K KL EGLF +K +P I VITS +GA + D+L + R P +I++P VQ Sbjct: 125 KFKLNNEGLFDTANKRALPERINRIGVITSSSGAALHDVLSVLKRRSPQTEIIVYPSMVQ 184 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ P ++ NA+ N E D+++L RGGGS+EDLW FNDE + R +A S++P Sbjct: 185 GETAPLQLINALRTANHRAE------VDVLLLTRGGGSLEDLWCFNDESLAREVAASALP 238 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D+T++D+ AD+RAPTP+ AAE+ L +L + RL I + ++ Sbjct: 239 IVSAVGHEVDFTISDFVADVRAPTPSAAAEILSQDSAALYQTLSQQKQRLARAIHQYLQT 298 Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L + L + + LDRL L H ++ + + + + R+ Sbjct: 299 SKQQLVLKKQRLNALHPQSRIQSQWQTLDRLQLRLAHKMQNDLAKAEKRLQGLDYRLNKQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 N+ + + + + + +R Sbjct: 359 SPSANVARAKDKLNYASTKLLSSMNTLIRS------------------------------ 388 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + +LQS + +TL RGY+ ++ I + Sbjct: 389 -----------------KKNELGGKVSLLQSVSPLSTLARGYSITL-SDKAAINSVNKVN 430 Query: 481 TKTRILINFFDGQANAIVINKA 502 I DG+ + V + Sbjct: 431 VGDEIKSRVTDGEITSTVTHIQ 452 >gi|196248857|ref|ZP_03147557.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. G11MC16] gi|196211733|gb|EDY06492.1| exodeoxyribonuclease VII, large subunit [Geobacillus sp. G11MC16] Length = 448 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 147/498 (29%), Positives = 241/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V L+ ++K V+ +L + ++GEIS ++ HS GH YF+LKD+ +RI A+ Sbjct: 1 MEVKYVTVGALTKYIKRKFDVDPHLRDLWIKGEISNFK-QHSRGHMYFTLKDSEARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F PE+G+ LV G+I+ + + YQ+ ++ + P G G L A E+ K++L Sbjct: 60 MFAGYNQHLPFRPEDGMNVLVRGEISVYEPNGNYQLYVKEMQPEGIGRLYLAYEQLKQRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS HK P+P P+ + V+TSPTGA +RDI+ I R+PL +VI+FP VQG+ Sbjct: 120 EAEGLFSSAHKKPLPAFPRCVGVVTSPTGAAVRDIMTTIRRRYPLAKVILFPALVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI + N E D++I+ RGGGSIE+LW FN+E++ RAI S +P+ISA Sbjct: 180 APSIVRAIERANDFSE------VDVLIVGRGGGSIEELWAFNEEIVARAIFASRVPVISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+AVP L + + RL + + Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPHIGELAERIAERKWRLIRAMKERLAANQER 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + + +LD L L E ++ +K + + R+ Sbjct: 294 LARLQASYAFRYPKRLYEQKEQQLDALLERLARQRERLVDKKRQRLRELHLRLWRHHPEA 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ ++ +E+ + Sbjct: 354 ELERMKERQKATAVALEKAM---------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + V L++ + ++RGY+ + + + + + L R Sbjct: 374 ---RTALERHAFRFRSHV----ARLEALSPLRIMERGYSLVYNERHELVKRIGQLQVGER 426 Query: 485 ILINFFDGQANAIVINKA 502 + I DGQ + V+ Sbjct: 427 LSIRVQDGQVDCQVMGVE 444 >gi|238794823|ref|ZP_04638424.1| Exodeoxyribonuclease 7 large subunit [Yersinia intermedia ATCC 29909] gi|238725836|gb|EEQ17389.1| Exodeoxyribonuclease 7 large subunit [Yersinia intermedia ATCC 29909] Length = 459 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 143/512 (27%), Positives = 228/512 (44%), Gaps = 57/512 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S ++VS L+ ++ ++E + + + EIS + SSGH YF+LKD +++ Sbjct: 2 SQSSASTIFTVSRLNQTVRQLLEMEMGQIWLTAEISNF-SQPSSGHWYFTLKDAQAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ T + F P+ G + LV IT + YQ+I ES+ P+G G L ++ K++ Sbjct: 61 AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P + + VITS +GA + D+LQ + R P L VII+P VQG + Sbjct: 121 LAAEGLFDQHHKQPLPSPARQVGVITSASGAALHDVLQVLQRRDPSLPVIIYPTAVQGVD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E DI+I+ RGGGS+EDLW FNDE + RAI NS IPI+S Sbjct: 181 APLQIVRAIQLANLRAE------CDILIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ ADLRAPTP+ AAE+ + L + + R+ + + + Sbjct: 235 AVGHETDITIADFVADLRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRGQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L +R + +L R LE + + I R + R+ Sbjct: 295 QFTRLEHRLQQQHPHLRLARQQTLLLKLQRRLEESAQNQIRGLSRRTERLQQRLAQVQPQ 354 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + Q + +++ + Q Sbjct: 355 GQIHRYSQQVQQQEYRLRQ----------------------------------------- 373 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L ++ I L++ + TL RGY+ Q + + + + Sbjct: 374 ------ALERQLNGYRQRFGIACSQLEAVSPLATLARGYSVTQTSAGVVLKTTKQIQAGD 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLH 515 ++ DG + + K+ +K Sbjct: 428 KLTTRLQDGWVESEITQINVAKKARQRKAAKE 459 >gi|321311914|ref|YP_004204201.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis BSn5] gi|320018188|gb|ADV93174.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis BSn5] Length = 448 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 139/496 (28%), Positives = 240/496 (48%), Gaps = 60/496 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L ++ ++GE+S + IH+ GH YF+LKD ++R+ ++++ Sbjct: 8 TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D++K IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I E D++I+ RGGGSIE+LW FN+E++ RAI S+IPIISA+GHETD Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E R+ + + + K + +L Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D ++ + L ++ RK R R+++ +++ R Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 E+ + + + ++ + Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + + ++RGY+ + I + + R+ + Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEVKLK 432 Query: 491 DGQANAIVINKAPPKE 506 DG V+ K ++ Sbjct: 433 DGVLTCEVLEKRGEEK 448 >gi|330807657|ref|YP_004352119.1| exodeoxyribonuclease VII, large subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327375765|gb|AEA67115.1| putative exodeoxyribonuclease VII, large subunit [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 459 Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats. Identities = 137/500 (27%), Positives = 227/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S++ V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNL-ARPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ ++G+ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQIALTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 182 VQGREATAQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + +L RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDAGDLVRRVESLHRRLVMRMRDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L L + L + + L RLD L + E + + + R+ Sbjct: 295 MRDQLRLEGLTRRLRHPGERLRQQAQRLDDLDMRMRRAFERSLNTRRERLIRLETRLAGQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + + + Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAM--------------------------------REGL 382 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K ++ + L + TL RGY+ + D I Sbjct: 383 KNRRVQLHNQMQT---------------LHIVSPLATLGRGYSILLDERGQAIRSAGQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLTAKLGEGELLVRVED 447 >gi|296314167|ref|ZP_06864108.1| exodeoxyribonuclease VII, large subunit [Neisseria polysaccharea ATCC 43768] gi|296839169|gb|EFH23107.1| exodeoxyribonuclease VII, large subunit [Neisseria polysaccharea ATCC 43768] Length = 469 Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 230/490 (46%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K ++E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 27 VLSVSELNAFAKSLLENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 85 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 86 AHLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 145 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 146 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGTGSELQIAQ 205 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E +VRAI +IP++S IGHETD Sbjct: 206 AIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGIGHETD 259 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ D+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 260 FTLADFVVDMRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 319 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ Sbjct: 320 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNVRAHTARFERQTQALQHCRP---------- 369 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I +I + T + S Sbjct: 370 ---------------------------------------DISVCKKNIDRFQTALPAAFS 390 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S++ +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 391 QLLARRRQSLAAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADG 450 Query: 493 QANAIVINKA 502 + + V + Sbjct: 451 ETDVRVSKEQ 460 >gi|226311925|ref|YP_002771819.1| exodeoxyribonuclease VII large subunit [Brevibacillus brevis NBRC 100599] gi|254783691|sp|C0ZC06|EX7L_BREBN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226094873|dbj|BAH43315.1| probable exodeoxyribonuclease VII large subunit [Brevibacillus brevis NBRC 100599] Length = 460 Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats. Identities = 154/509 (30%), Positives = 251/509 (49%), Gaps = 60/509 (11%) Query: 14 EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SVS+L+ ++K ++E +L + VRGEIS + HSSGH YF+LKD SRI +++ Sbjct: 6 ILSVSDLNRYIKLVLEKEPHLQDIWVRGEISNFTH-HSSGHMYFTLKDKQSRIKVVMFAS 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + FLP++G + +V G I+ + YQ + + P G G+L A E+ K+KL +EG Sbjct: 65 YNRFLRFLPKDGAKAIVRGSISAYERDGAYQFYAKEMQPDGLGSLYLAFEQLKEKLAQEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K +P PK + V+TSPTGA IRDI I R+P +++ P VQG + P I Sbjct: 125 LFAAERKRMLPRFPKRVGVVTSPTGAAIRDICTTIRRRYPQAEIVLSPAVVQGADAPASI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +AI +N P D++I+ RGGGSIE+LW FNDE + RAIA S IP+ISA+GHE Sbjct: 185 VSAIRIMN------DQPDIDVLIVGRGGGSIEELWAFNDENVARAIATSLIPVISAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS- 309 TD T+AD+ AD+RA TPT AAE+AVP + LE R++ + + + N L Sbjct: 239 TDVTIADFVADVRAATPTAAAELAVPHYLEWVERVRQLEIRMHRAVRGTMTEQRNRLTRL 298 Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 A+ ++ L + RLDR + +++ ++ R+ + + +IK L I + Sbjct: 299 GNSYAMRQPERRLEEAAERLDRAHLRMRQSMKHLLDRRRERYTRLDEQIKRYRLADQIGE 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+++ + + +++ + L + +IA L Sbjct: 359 KRKNLSKLRATLDERMLGRLNQKRMAFAARIATL-------------------------- 392 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ + ++RG++ + N+ + A I++ Sbjct: 393 ---------------------EALSPLKVMQRGFSLVYT-NDRLVKSVEQFAPGDEIMVR 430 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNN 517 DG A A V +E+ + + Sbjct: 431 LSDGSATARVEKVNREEEKQSGSQKNGTR 459 >gi|307824441|ref|ZP_07654666.1| exodeoxyribonuclease VII, large subunit [Methylobacter tundripaludum SV96] gi|307734425|gb|EFO05277.1| exodeoxyribonuclease VII, large subunit [Methylobacter tundripaludum SV96] Length = 452 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 148/501 (29%), Positives = 236/501 (47%), Gaps = 58/501 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S+ +V++L+ ++ + V V GE+S SSGH YFSLKD ++++ Sbjct: 5 SASIRRNIITVTQLNRETSQLLAEHFLSVLVEGELSNLST-PSSGHLYFSLKDANAQVRC 63 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ ++ F PE G + +V +++ + YQ+I+E + +G G L A + K K Sbjct: 64 AMFRTQQRRLAFKPENGKQVIVKAQVSLYEPRGDYQLIVEHIEEAGDGALRRAFDALKLK 123 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 L E+GLF HK +P +P+ I VITSP+GA IRDIL + RF + VI++PV VQGD Sbjct: 124 LSEQGLFDAAHKQTLPTLPRAIGVITSPSGAAIRDILTVLQRRFAAIPVIVYPVAVQGDN 183 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 EIA AI N + D+IIL RGGGS+EDLW FN+E++ RAI +S IPIIS Sbjct: 184 AKHEIAKAIATANR------HKQCDVIILGRGGGSLEDLWAFNEELVARAIYDSEIPIIS 237 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD+T+AD+ ADLRA TP+ AAE A P ++ S + LE+RL + R + K Sbjct: 238 AVGHETDFTIADFVADLRAATPSAAAEHASPDQQQWLSRFMYLESRLQQQLQRKLNQKQQ 297 Query: 306 TLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 TL+ L + L + Q L+ + R+ L L + + ++ Sbjct: 298 TLDWLNQRLQQQHPGQKLAGNARRMAELEARLNQAIHAKLRHMTGIIEAKTAKLWQHNPA 357 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I+ ++Q + + Sbjct: 358 ITIRSHKQRQDYLSKRLISA---------------------------------------- 377 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATK 482 +HK++ + + +++ L + + TL RGY + ++ I L Sbjct: 378 -------AAHKLEQLNQRLLNSSQTLHAVSPLATLNRGYAMVISPSSGEIIRSTEQLKPG 430 Query: 483 TRILINFFDGQANAIVINKAP 503 R+ G+ + + P Sbjct: 431 DRVQTRLAQGRFTSQIKVIDP 451 >gi|308174225|ref|YP_003920930.1| exodeoxyribonuclease VII large subunit [Bacillus amyloliquefaciens DSM 7] gi|307607089|emb|CBI43460.1| exodeoxyribonuclease VII (large subunit) [Bacillus amyloliquefaciens DSM 7] Length = 453 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 144/491 (29%), Positives = 241/491 (49%), Gaps = 60/491 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L + ++GE+S + IH+ GH YF+LKD H+R+ A++++ Sbjct: 14 TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDEHARMQAVMFQRQS 72 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++ F PE+G++ +V G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 73 SRLAFKPEDGMKVIVRGGISVYEPSGSYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 132 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D+HK IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 133 DDRHKQAIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVK 192 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + N K D++I+ RGGGSIE+LW FN+E++ RAI S+IP+ISA+GHETD Sbjct: 193 RIEEANAQKM------CDVLIVGRGGGSIEELWAFNEEIVARAIFASAIPVISAVGHETD 246 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E RL + + I K + +L Sbjct: 247 FTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHISKKKERVQALQS 306 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D L ++ + L + RK R R+ + + +++ + Sbjct: 307 SYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQRQLERNTYRLTALHPENQLKQAK 366 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + E+ +E+ + Sbjct: 367 KRYEERSNQLERSMNVQ------------------------------------------- 383 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +K H+ L + + ++RGY+ + I + + + Sbjct: 384 ----LKQLHSQFQTVLGKLNALSPLQVMERGYSLAY-KDKELIKSVDQVEQNDTLEVKMT 438 Query: 491 DGQANAIVINK 501 DG V+ K Sbjct: 439 DGVLTCEVLQK 449 >gi|288942410|ref|YP_003444650.1| exodeoxyribonuclease VII large subunit [Allochromatium vinosum DSM 180] gi|288897782|gb|ADC63618.1| exodeoxyribonuclease VII, large subunit [Allochromatium vinosum DSM 180] Length = 449 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 139/493 (28%), Positives = 220/493 (44%), Gaps = 58/493 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVS L + ++E+ + VRGEIS SGH YFSLKD +++ +W+ + Sbjct: 9 SVSRLVSEARAVLETGFPRLWVRGEISNL-AQPGSGHLYFSLKDAGAQVRCALWRSKRQR 67 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F G + L +++ + ++Q++IE L P G G L A E+ K++L EGLF Sbjct: 68 LAFGLANGQQVLARAQVSLYEPRGEFQLLIEHLEPDGEGALRLAFEQLKQRLAAEGLFEA 127 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 K P+P P+ + +ITSP+GA +RD++ + RFP L V+I+P +VQG+ P+ + A+ Sbjct: 128 ALKRPLPPFPRQVGLITSPSGAAVRDLITVLGRRFPALPVLIYPAQVQGESAPESLIAAL 187 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N E D++ILARGGGS+EDL FNDE + RA+ S IP++S +GHE D T Sbjct: 188 ELANVRAE------CDVLILARGGGSLEDLNAFNDERLARAVRASRIPVVSGVGHEIDVT 241 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD AD RA TP+ AAE+ P HL+ + L RL R + LN+ + L Sbjct: 242 IADLVADQRAATPSAAAELVAPSGAHLRERVATLSNRLIAAQRRRLDAARQRLNASRRHL 301 Query: 315 P--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + L RLDR L + I R ++ R++ H I++ R Sbjct: 302 SLLHPSARLQQQAQRLDRAEWRLRTLIANRISEARRRLQPLVERLERQAPAHRIERARCQ 361 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++ + + + Sbjct: 362 LEALERRLHRAQYE---------------------------------------------- 375 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRILINFFD 491 + + L++ + TL RGY + + +A R+ I Sbjct: 376 -LLTHRRERLWRAVAGLEARSPLGTLSRGYAILTRLPEGEIVRDPAQVAPGDRLQIRVAG 434 Query: 492 GQANAIVINKAPP 504 G+ A+ AP Sbjct: 435 GRIEAVARPSAPA 447 >gi|237800056|ref|ZP_04588517.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|237806385|ref|ZP_04593089.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022911|gb|EGI02968.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. oryzae str. 1_6] gi|331027498|gb|EGI07553.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. oryzae str. 1_6] Length = 459 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 234/500 (46%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVITVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSS 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RAI Sbjct: 182 VQGREAINQIVRALKLADAQ-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + + H+ +R+ + Sbjct: 295 MRERLQLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHTRQVRLVHMQSRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + ++ ++ L+ + Sbjct: 355 HPGRTLAFLRQRLDALAERLPRAIRDQIKARKLQLQ------------------------ 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 391 -----------------------SQMQTLNVVSPLATLGRGYSILLDERGHAIRHASQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLTARLGEGELQVRVED 447 >gi|229543901|ref|ZP_04432960.1| exodeoxyribonuclease VII, large subunit [Bacillus coagulans 36D1] gi|229325040|gb|EEN90716.1| exodeoxyribonuclease VII, large subunit [Bacillus coagulans 36D1] Length = 446 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 149/497 (29%), Positives = 252/497 (50%), Gaps = 61/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV L+ ++K +++ L+ + V+GEIS ++ HSSGH YF+LKD +R+ ++++ Sbjct: 4 LSVHTLTKYIKRKFDADPYLNDIHVKGEISNFK-RHSSGHMYFTLKDEKARLLSVMFASA 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++F+PE G++ LV G ++ + YQ+ ++S+ P G G L A E+ K+KL +EGL Sbjct: 63 NRTLKFMPENGMKVLVTGSVSVYEAGGSYQLYVKSMQPDGIGALYLAFEQLKEKLEKEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F Q++ PIP PK+I VITSPTGA +RDI+ I R+P+ +I+ P VQG+ I Sbjct: 123 F--QNRRPIPAYPKVIGVITSPTGAAVRDIITTIRRRYPVAEIILHPALVQGENAAPSIV 180 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI Q N + + D++I+ RGGGSIE+LW FN+E+ RAI S+IP+ISA+GHET Sbjct: 181 KAIEQANRI------GKADVLIVGRGGGSIEELWAFNEEITARAIFASNIPVISAVGHET 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+AADLRAPTPT AAE+AVP + ++ +++L+ RL + ++Y+ + L L Sbjct: 235 DFTIADFAADLRAPTPTAAAELAVPHIDDVREKILHLKTRLIRNMREKVRYEKSRLAYLE 294 Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + L N + + + DRL L +I ++ R+ + + + Sbjct: 295 RSPVLTNPYRLIRQQIEQADRLTDRLHREAGRLIGTAEEQTRNLHGRLLRNRPEQKLLQA 354 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R++ + ++ + + +++ R Sbjct: 355 RRNFTSLEANL--------------------------------VKQMQAVLREKQHRFAK 382 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +S L++ + ++RGY+ + + + T I + Sbjct: 383 NISA---------------LEALSPLKVMERGYSLAMAEDGTILKKTSQAKTGETIRVRL 427 Query: 490 FDGQANAIVINKAPPKE 506 DG V K+ Sbjct: 428 TDGGLLCTVDKIERGKK 444 >gi|325205869|gb|ADZ01322.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis M04-240196] Length = 451 Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats. Identities = 134/490 (27%), Positives = 230/490 (46%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + E D++I+ RGGGSIEDLW FN+E +VRAI +IP++S +GHETD Sbjct: 188 VIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + + L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKFDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 K R+ +L R+ Sbjct: 356 ----------CKKNIDRFQTALPAAFSQLLARRRQS------------------------ 381 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 +S +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 382 ---------LSAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|327439757|dbj|BAK16122.1| exonuclease VII, large subunit [Solibacillus silvestris StLB046] Length = 452 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 148/506 (29%), Positives = 242/506 (47%), Gaps = 60/506 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV L+ ++K + +L V V GE+S + HSSGH YF+LKD+ SRI+A Sbjct: 2 TSNSYLSVKALTKYIKRKFDADPHLRDVYVTGELSNVKV-HSSGHIYFTLKDDSSRINAT 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K+ F PEEG++ + G + + S YQ+ +++ P G G L A + K++L Sbjct: 61 MFRSQASKLSFKPEEGMKVFIRGDVNVYEASGAYQLYAQTMEPDGIGGLFVAFNQLKERL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ K PIP PK I V+T+ TGA IRDI I+ R+P ++I+P VQG Sbjct: 121 QNEGLFNPNFKQPIPQFPKTIGVLTATTGAAIRDICTTINRRYPQAEILIYPTLVQGAGA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D++I+ RGGGSIEDLW FN+E++ RAI S IP+ISA Sbjct: 181 APNITENIYLANR------HGFCDVLIVGRGGGSIEDLWAFNEEIVARAIFESRIPVISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ ADLRAPTPT AAE+AVP ++ L +++ ++ L+ ++ + ++ N Sbjct: 235 VGHETDTTIADFVADLRAPTPTAAAELAVPNQQQLYQQILHYQSILHQMMTSKLNFERNR 294 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L ++ RL ++ L++ ++ + + I +++K +H Sbjct: 295 LTKLQNSYPLATPERLYRPFIERLVQVDLSLQNATKLYMMNEKSKLQSIDSKMKLYSPVH 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q + + Q + + Sbjct: 355 QLIAAKQQLEHRTQTLTNRM---------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + + R+L++ + +G++ N + L Sbjct: 375 -------QQQLAQNKVAFTNQLRMLEALNPLALMSKGFSVAYKEEN-VVKSVHELEKGDV 426 Query: 485 ILINFFDGQANAIVINKAPPKEQPTK 510 I + F DG A A + K KE K Sbjct: 427 IQVTFQDGYAEAKIEKKHVQKEGEAK 452 >gi|154686694|ref|YP_001421855.1| exodeoxyribonuclease VII large subunit [Bacillus amyloliquefaciens FZB42] gi|154352545|gb|ABS74624.1| XseA [Bacillus amyloliquefaciens FZB42] Length = 453 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 145/491 (29%), Positives = 239/491 (48%), Gaps = 60/491 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L + ++GE+S + IH+ GH YF+LKD H+R+ A++++ Sbjct: 14 TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDEHARMQAVMFQRQS 72 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++ F PE+G++ +V G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 73 SRLAFKPEDGMKVIVRGGISVYEPSGSYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 132 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D+HK IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 133 DDRHKQAIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVK 192 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + N K D++I+ RGGGSIE+LW FN+E++ RAI S+IPIISA+GHETD Sbjct: 193 RIEEANAQKM------CDVLIVGRGGGSIEELWAFNEEIVARAIFASAIPIISAVGHETD 246 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E RL + + I K + SL Sbjct: 247 FTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHISKKKERVQSLQS 306 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D L ++ + L + RK R R+ + +++ + Sbjct: 307 SYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQRQLERNTYRLTALHPETQLKQAK 366 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + E+ + + + Sbjct: 367 KRYEERSNQLARSMNVQ------------------------------------------- 383 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +K H+ L + + ++RGY+ + I + + + Sbjct: 384 ----LKQLHSQFQTVLGKLNALSPLQVMERGYSLAY-KDKKLIKSVDQVEQNDTLEVKMT 438 Query: 491 DGQANAIVINK 501 DG V+ K Sbjct: 439 DGVLTCEVLQK 449 >gi|328554170|gb|AEB24662.1| exodeoxyribonuclease VII large subunit [Bacillus amyloliquefaciens TA208] gi|328912562|gb|AEB64158.1| exodeoxyribonuclease VII (large subunit) [Bacillus amyloliquefaciens LL3] Length = 447 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 144/491 (29%), Positives = 241/491 (49%), Gaps = 60/491 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L + ++GE+S + IH+ GH YF+LKD H+R+ A++++ Sbjct: 8 TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDEHARMQAVMFQRQS 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++ F PE+G++ +V G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 SRLAFKPEDGMKVIVRGGISVYEPSGSYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D+HK IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 127 DDRHKQAIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVK 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + N K D++I+ RGGGSIE+LW FN+E++ RAI S+IP+ISA+GHETD Sbjct: 187 RIEEANAQKM------CDVLIVGRGGGSIEELWAFNEEIVARAIFASAIPVISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E RL + + I K + +L Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLMERTKTAEVRLTRAMQQHISKKKERVQALQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D L ++ + L + RK R R+ + + +++ + Sbjct: 301 SYAFRFPKRLYTQKEQQFDLLYQQFQSQLTGLTDRKQRQLERNTYRLTALHPENQLKQAK 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + E+ +E+ + Sbjct: 361 KRYEERSNQLERSMNVQ------------------------------------------- 377 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +K H+ L + + ++RGY+ + I + + + Sbjct: 378 ----LKQLHSQFQTVLGKLNALSPLQVMERGYSLAY-KDKELIKSVDQVEQNDTLEVKMT 432 Query: 491 DGQANAIVINK 501 DG V+ K Sbjct: 433 DGVLTCEVLQK 443 >gi|77460813|ref|YP_350320.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens Pf0-1] gi|123603400|sp|Q3K7C5|EX7L_PSEPF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|77384816|gb|ABA76329.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens Pf0-1] Length = 459 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 233/500 (46%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S++ V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSNIWVEGEISNL-ARPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ ++G+ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +I+SPTGAVIRDI+ R P +++ + P Sbjct: 122 ALKEKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQVQLTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 182 VQGREATAQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P HL + +L RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSHLIRQVESLHRRLVMRMRDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L + + L + + L RLD L + E + + + R+ Sbjct: 295 MRDRLRLEGMTRRLRHPGERLRQQAQRLDDLDMRMRRAFERQLNTRRERLIRLETRLAGQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + + + + Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAM--------------------------------NEGL 382 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K+ +++ + L + TL RGY+ + D N I Sbjct: 383 KRRRLQLQSQMQT---------------LHVVSPLATLGRGYSILLDERGNAIRNAAQTH 427 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 428 TGQRLKARLGEGELQVRVED 447 >gi|114331498|ref|YP_747720.1| exodeoxyribonuclease VII, large subunit [Nitrosomonas eutropha C91] gi|122313696|sp|Q0AFX7|EX7L_NITEC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|114308512|gb|ABI59755.1| Exodeoxyribonuclease VII large subunit [Nitrosomonas eutropha C91] Length = 448 Score = 351 bits (901), Expect = 2e-94, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 229/503 (45%), Gaps = 60/503 (11%) Query: 4 FSQKNSLDHP---EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 + N P + VSEL+ H++ I+E + V GEIS + SGH YFSLKD+ Sbjct: 1 MTDNNLFPEPKKIVWRVSELNRHVRVILEQTFPLLWVSGEISNLKRYP-SGHWYFSLKDD 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++++ ++++ ++++P++G + IT + ++Q+ IE L +G G L Sbjct: 60 NAQVRCVMFRHKNMYLDWMPQDGAQVEAQALITLYEARGEFQLTIERLRRAGLGVLFETF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L +EGLF+ ++K IP P+ I +ITS A +RD+L + R P L V+I+P Sbjct: 120 ERLKTRLQQEGLFNPEYKQLIPPYPQQIGIITSTNTAALRDVLTTLQRRLPSLPVVIYPA 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E I A+ E D++IL RGGGSIEDLW FN+E++ RAIA Sbjct: 180 PVQGKEAASAIVTALQIATQRSE------CDVLILCRGGGSIEDLWAFNEEIVARAIAAC 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI++ IGHETD+T+AD+ AD+RAPTPTGAA++A P ++ + L + RL I R Sbjct: 234 PIPIVTGIGHETDFTIADFVADMRAPTPTGAAQLAAPDRQDILHRLQYWQHRLQQAIERN 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 I+ ++ T + L L + + + L +L L H + RI+ Sbjct: 294 IERRMQTTDLLAHRLVHPGERIRYQLIHLSQLHNRLLHAWSRQLEVCKWRIEAFRRRIQF 353 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 N K Q E +++ + Sbjct: 354 TKPDINTGKRYQQ--ELAARLQRAMVY--------------------------------- 378 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 R+E + I+ L K L+RGY+ + + + Sbjct: 379 ------RLESLQVQLIRQQQH--------LAHLDPKAVLERGYSITYTAGGEILQDSQQI 424 Query: 480 ATKTRILINFFDGQANAIVINKA 502 T + I F G A A + Sbjct: 425 HTGDNVQIVFAKGSAKANITETN 447 >gi|113461359|ref|YP_719428.1| exodeoxyribonuclease VII large subunit [Haemophilus somnus 129PT] gi|123327313|sp|Q0I3T0|EX7L_HAES1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|112823402|gb|ABI25491.1| Exodeoxyribonuclease VII large subunit [Haemophilus somnus 129PT] Length = 448 Score = 351 bits (901), Expect = 2e-94, Method: Composition-based stats. Identities = 140/496 (28%), Positives = 226/496 (45%), Gaps = 57/496 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 ++N YSVS+L+ ++ ++E L V + GEIS + SGH YFSLKD ++++ Sbjct: 2 EQNMGQAKIYSVSQLNQSVRQMLEGQLGVVWLTGEISNFT-QPVSGHWYFSLKDENAQVR 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ ++ F + G++ LV ++ + YQ+IIES+ +G G L E K Sbjct: 61 CAMFRMKNMRVGFKAQNGMQVLVRASVSLYEPRGDYQLIIESMNLAGDGLLQRQFEALKL 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ +K +P K + +ITSPTGA ++DIL + R P L V+I+P VQG Sbjct: 121 TLAAEGLFAQHYKKNLPHFAKSVGIITSPTGAALQDILHILQRRDPSLHVVIYPTAVQGK 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E EI I N +E D++I+ RGGGS+EDLW FN+E + RAI +S +PII Sbjct: 181 EATAEIVQMIELANKRRE------VDVLIVGRGGGSLEDLWCFNEERVARAIFHSELPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY-- 302 SA+GHETD T+AD+ AD+RAPTP+ AAE+ ++ L L + RL + R + Sbjct: 235 SAVGHETDVTIADFVADVRAPTPSAAAELVSRHQQELLDQLFYRKQRLEMALDRFFQQKV 294 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 K+ + L+ + + +L L L + +K + + R+ + L Sbjct: 295 KLLQRLQFRLQQQHPQSQLNIQQKMMQQLLHRLHLALSTFVDKKQQKMTALCRRLDNSPL 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + +QK Q +++ + + Sbjct: 355 PYYVQKQHQILVQLELRL------------------------------------------ 372 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 L K K+ +S L S + L RGY+ ++ + + Sbjct: 373 -----NSGLQKKFKNADYQLSRLCGKLDSLSPLKVLARGYSITKNQQGQALKNSHQIEVG 427 Query: 483 TRILINFFDGQANAIV 498 I G + V Sbjct: 428 QLISTQLERGIIVSRV 443 >gi|222055715|ref|YP_002538077.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. FRC-32] gi|259646292|sp|B9M0X3|EX7L_GEOSF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|221565004|gb|ACM20976.1| exodeoxyribonuclease VII, large subunit [Geobacter sp. FRC-32] Length = 445 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 152/491 (30%), Positives = 252/491 (51%), Gaps = 56/491 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SVS+L+ +++++E N HV V GE+S SGH YF+LKD +++ +++ Sbjct: 4 AEKNILSVSQLTGLVRNVLEDNFDHVWVEGEVSNL-ATPGSGHLYFTLKDASAQLRCVMF 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ ++F P +G+ + G+++ F +YQ+I+E L P G G L A + K++L + Sbjct: 63 RASVRALKFKPSDGMGLIARGRLSVFDARGEYQLIVEYLEPKGIGALQLAFIQLKERLAK 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EGLFSD HK IP +P+ I ++TS TGA I DIL ++ RF ++V++ PVKVQG+ + Sbjct: 123 EGLFSDSHKKDIPRLPQRIGIVTSATGAAIHDILNVLNRRFANVQVLLRPVKVQGEGAAE 182 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA A+ LN D++I+ RGGGS+EDLW FN+E++ RAI SSIP+ISA+G Sbjct: 183 EIAAAVNDLNR------YGSIDVMIVGRGGGSLEDLWAFNEEIVARAIYRSSIPVISAVG 236 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+T++D+ ADLRAPTP+ AAEM + K + + L L RL + RL+ LN Sbjct: 237 HEIDFTISDFVADLRAPTPSAAAEMVIKSKAEISAELEALFHRLGMAVRRLLNEHWGELN 296 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L++A+ + L RLD L + ++ R + + +R++ + +++ Sbjct: 297 GLVRAVKDPSMLLGHLAQRLDDLEGRSWRCIRQLLIRSADTNHFLHDRLRLQNPVLRLER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ +L Q IE+ + Sbjct: 357 CREQLLLVQSRIEKTMMH------------------------------------------ 374 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487 ++ S++ LQ+ + T+ RGY+ ++ +T + LA + I Sbjct: 375 -----TVERAGQSLAFNAGKLQALSPLATMARGYSIVKKLPGGAVVTDRDQLAPGDSLDI 429 Query: 488 NFFDGQANAIV 498 G+A V Sbjct: 430 LLRKGRAICRV 440 >gi|325204356|gb|ADY99809.1| exodeoxyribonuclease VII, large subunit [Neisseria meningitidis M01-240355] Length = 451 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 135/490 (27%), Positives = 231/490 (47%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ K I+E++L+ + + GE+S +SGH YFSLKD+ +++ ++KG Sbjct: 9 VLSVSELNAFAKSILENHLAGLWIAGEVSNLT-RAASGHYYFSLKDSRAQVRCAMFKGAA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ +EG V GKI+ + ++QI + + G G L A E+ K +L EG F Sbjct: 68 ARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TS A +RD++ + R P + VI++P VQG +IA Sbjct: 128 AAERKKPLPARPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTVVQGTGSELQIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + E D++I+ RGGGSIEDLW FN+E +VRAI +IP++S +GHETD Sbjct: 188 VIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEACTIPVVSGVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + L+ L + Sbjct: 242 FTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQRYFDASQKLDWLAR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + Q L R + +L + L +++ + F ++ ++ Sbjct: 302 QIRHPRQKLDEQRTYIHKLAQTLSYSMTQNLRAHAARFERQTQALQHYRPDISV------ 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 K R+ +L R+ Sbjct: 356 ----------CKKNIDRFQTALPAAFSQLLARRRQS------------------------ 381 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 +S +L++ + ++ L+RG++ +++T I L ++ I F DG Sbjct: 382 ---------LSAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADG 432 Query: 493 QANAIVINKA 502 + + V + Sbjct: 433 ETDVRVSKEQ 442 >gi|70732268|ref|YP_262024.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens Pf-5] gi|123775841|sp|Q4K6V9|EX7L_PSEF5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|68346567|gb|AAY94173.1| exodeoxyribonuclease VII, large subunit [Pseudomonas fluorescens Pf-5] Length = 459 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 138/500 (27%), Positives = 228/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +V++L+ + ++E S++ V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVTQLNGRARVLLEDVFSNIWVEGEISNL-ARPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ ++G+ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL EGLFS + K P+P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKDKLSAEGLFSAERKVPLPAHPQRIGIISSPTGAVIRDIISVFRRRAPQVVLTLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 182 VQGREATAQIVRALQLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ + NL RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLQRRVDNLHRRLVMRMRDRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L+ L + L + + L RLD L L E + + + R+ + Sbjct: 295 VRDRLRLDGLARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETRLGAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + + + Sbjct: 355 HPGRQLALLRQRLDSLAERLPRAM--------------------------------REGL 382 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K ++ + L + TL RGY+ + D I Sbjct: 383 KGRRLQLHSQMQT---------------LHVVSPLATLGRGYSILLDDRGQAIRSAGQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLSARLGEGELQVRVED 447 >gi|315180969|gb|ADT87883.1| exodeoxyribonuclease VII, large subunit [Vibrio furnissii NCTC 11218] Length = 423 Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats. Identities = 135/475 (28%), Positives = 230/475 (48%), Gaps = 57/475 (12%) Query: 27 IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86 ++E+ + V + GEIS + SGH Y +LKD+ +++ ++KG+ + F P+ G + Sbjct: 2 LLENEMGIVWLIGEISNFSA-PVSGHWYLTLKDSRAQVKCAMFKGSNRFVRFKPQNGQQV 60 Query: 87 LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPK 146 LV +++ + YQIIIES+ P G G L ++ K +L EGLF+ K+P+P P+ Sbjct: 61 LVKARLSLYEPRGDYQIIIESMQPEGDGRLQQEFDQLKMQLAAEGLFAQTLKHPLPEHPR 120 Query: 147 IIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRT 205 + VITS TGA + DILQ + R P L +II+P VQG++ +IA AI + N +E Sbjct: 121 CVGVITSKTGAALHDILQVLKRRDPSLPIIIYPTLVQGEDAAIQIAQAIGRANAREE--- 177 Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265 D++I+ RGGGS+EDLW FN E++ R IA S IPIISA+GHE D T+AD+ AD+RAP Sbjct: 178 ---CDVLIVGRGGGSLEDLWCFNHEIVARTIAASQIPIISAVGHEIDVTIADFVADVRAP 234 Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSC 323 TP+ AAE+ H + + E +L++ + + + L L L + L Sbjct: 235 TPSAAAELVSRDNSHKKQAFQGYEHKLSSAMRHYVSEQKGALKQLQYRLDKQHPMYRLQR 294 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 + +LD L LE ++ + + +H +R++ +++ + +++ + Sbjct: 295 QQQQLDELSMRLERAIQKQLNQTRQHVAKQQHRLQLQSPEKTLREQHYTLALRERSLI-- 352 Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + ++ S + Sbjct: 353 ---------------------------------------------DAMQRQLVSSRHRFT 367 Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 L + + TL RGY+ Q + + Q ++ T +++ DG+ ++ V Sbjct: 368 RLIDKLDTVSPLATLSRGYSITQTSQGEIVRQASDVKTGDQLVTRLADGEIHSTV 422 >gi|296333413|ref|ZP_06875866.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675081|ref|YP_003866753.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. spizizenii str. W23] gi|296149611|gb|EFG90507.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413325|gb|ADM38444.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. spizizenii str. W23] Length = 448 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 138/496 (27%), Positives = 240/496 (48%), Gaps = 60/496 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L ++ ++GE+S + IH+ GH YF+LKD ++R+ ++++ Sbjct: 8 TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D++K IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIV- 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + ++E D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA+GHETD Sbjct: 186 -----SRIEEANEKEVCDVLIVGRGGGSIEELWAFNEEIVARAIFASHIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E R+ + + + K + +L Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D ++ + L ++ RK R R+++ +++ R Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKNRQLERETYRLEALHPHEQLKQAR 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 E+ + + + ++ + Sbjct: 361 TRYEEQTNQLRKNMNIQMKQL--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + + ++RGY+ + I + K + + Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-ELIKSVSQIEEKDQFEVKLK 432 Query: 491 DGQANAIVINKAPPKE 506 DG V+ K ++ Sbjct: 433 DGVLTCEVLEKRGEEK 448 >gi|218960584|ref|YP_001740359.1| Exonuclease VII large subunit [Candidatus Cloacamonas acidaminovorans] gi|167729241|emb|CAO80152.1| Exonuclease VII large subunit [Candidatus Cloacamonas acidaminovorans] Length = 446 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 144/490 (29%), Positives = 240/490 (48%), Gaps = 55/490 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + YSV E++ ++ ++E++L V V GEISG+ HSSGH YF+LKD ++ + +K Sbjct: 3 NVIIYSVYEITRQVRQVIETSLQPVFVMGEISGF-IRHSSGHIYFNLKDENATLRCTFFK 61 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F P +G++ + GK+T + Y + ++ + +G G L E+ KKKL +E Sbjct: 62 GANASLTFQPADGMQVICFGKLTVYEKGGYYNLNVQKMQEAGMGLLQQKFEQLKKKLEKE 121 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF+ +HK P+P P I +ITSPTGA ++DI+ I R+P+ +I++P VQG + P +I Sbjct: 122 GLFAAEHKKPLPKYPDRIGIITSPTGAALQDIINIIKRRYPVELIVYPALVQGSDAPPQI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I N D II+ RGGGS EDL+ FNDE + RAI SS+P+ISA+GHE Sbjct: 182 IQGIRYFNK------TRDVDFIIITRGGGSQEDLFCFNDEALARAIYASSLPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+TLAD+ ADLRAPTP+ AAE+AVP K+ L + L +L+ RL+ + K L +L Sbjct: 236 IDFTLADFVADLRAPTPSAAAELAVPDKKDLLNLLASLKKRLDLSVQNNFTGKRTPLLNL 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + ++ + R D L + L+ + + Sbjct: 296 QLELAKYHPERVWRGFQQRFDMAEMALNNALK------------------------QLPE 331 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R K +I Q + + + ++ Sbjct: 332 KRLQFEMKANNIMQQLNSRIELC---------------------LAKSKADCNLTWHQLN 370 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++++++ ++ + IL+ + ++ +G+ I+ + ++ + ++ Sbjct: 371 EKINNQLQCKTNRLNSLSEILEQLSPRSIQSKGWIMAF-KEGKLISSIKQVSEGENLSLD 429 Query: 489 FFDGQANAIV 498 F DG A V Sbjct: 430 FADGIAETTV 439 >gi|152985148|ref|YP_001346723.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa PA7] gi|150960306|gb|ABR82331.1| exodeoxyribonuclease VII, large subunit [Pseudomonas aeruginosa PA7] Length = 462 Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats. Identities = 138/505 (27%), Positives = 223/505 (44%), Gaps = 60/505 (11%) Query: 1 MNPFSQKN----SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 M P LD +VS+L+ + ++E V V GE+S +SGH YF+ Sbjct: 1 MPPMRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFT 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 LKD++++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L Sbjct: 60 LKDSNAQIRCALFRQNAQRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGAL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A E K+KL EGLF+ + K P+P P+ I +++SP+GAVIRDI+ R P + + Sbjct: 120 RLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELT 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 + P VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA Sbjct: 180 LVPTAVQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARA 232 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +A + PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL Sbjct: 233 VAACATPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLR 292 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + + L + + L + + L RLD L L E + ++ + Sbjct: 293 MRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLET 352 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R+ + + RQ + + + + Sbjct: 353 RLAAQHPGRTLALLRQKLDSLAARLPRAAHEV---------------------------- 384 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 +K + + L + TL RGY+ + D I Sbjct: 385 -------------------LKDRRRRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRD 425 Query: 476 KRNLATKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 426 AGQAQPGQRLKARLAEGELEVRVED 450 >gi|121998462|ref|YP_001003249.1| exodeoxyribonuclease VII large subunit [Halorhodospira halophila SL1] gi|121589867|gb|ABM62447.1| Exodeoxyribonuclease VII large subunit [Halorhodospira halophila SL1] Length = 458 Score = 350 bits (899), Expect = 3e-94, Method: Composition-based stats. Identities = 148/497 (29%), Positives = 229/497 (46%), Gaps = 58/497 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 +++ D Y+ S+L+ ++ ++E+ L V V GEIS SSGH YF+LKD +++ Sbjct: 2 ERSRDDTAVYTPSQLNQEVRGMLETVLPSVWVEGEISNL-ARPSSGHMYFTLKDPGAQVR 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++G + + P +G + + K + +P ++Q+I+E L PSG G L A E K+ Sbjct: 61 CALFRGRASALRHRPADGDQVRIRAKASLYPARGEFQLIVEHLEPSGEGALQRAFEALKQ 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184 +L EGLF K P+P +P+ + VITSPTGA IRD+LQ + RF L V+I+PV VQG+ Sbjct: 121 RLQAEGLFDAASKRPVPKMPRRLGVITSPTGAAIRDVLQVLERRFAALPVLIYPVPVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 I A+ E D ++L RGGGS+EDLW FN+E + RAI IP++ Sbjct: 181 AAAPAIVRALELAGHRAE------VDALLLTRGGGSLEDLWPFNEEAVARAIRACPIPVV 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHE D T+AD AADLRAPTP+ AAE P + Q L L RL R + Sbjct: 235 SAVGHEVDLTIADLAADLRAPTPSAAAETLSPDGQAWQEQLERLGHRLEVAAGRRLGRAG 294 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L+ L + L + + L RLD L L + + R + R++ Sbjct: 295 DQLSGLQRRLAAQHPGRRLRDRAQRLDELEGRLHRLGHQAVESRRRRLHTAEQRLQVQDP 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 RQ + E Q + Sbjct: 355 RRRTTNERQRVAELAQRLH----------------------------------------- 373 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI-TQKRNLAT 481 + ++++ + +R L + + TL+RGY +Q ++ I + + Sbjct: 374 ------HTVRGRLETSQQRLGNASRALHAVSPLATLERGYAVVQREEDSAILRRADAVRV 427 Query: 482 KTRILINFFDGQANAIV 498 RI G + V Sbjct: 428 GERIRARLAHGALDCRV 444 >gi|293394887|ref|ZP_06639177.1| exodeoxyribonuclease VII [Serratia odorifera DSM 4582] gi|291422638|gb|EFE95877.1| exodeoxyribonuclease VII [Serratia odorifera DSM 4582] Length = 434 Score = 350 bits (899), Expect = 3e-94, Method: Composition-based stats. Identities = 135/473 (28%), Positives = 217/473 (45%), Gaps = 53/473 (11%) Query: 31 NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90 + H+ + EIS SSGH YF+LKD+ +++ +++ + F P+ G + LV Sbjct: 2 EMGHIWLSAEISNL-SQPSSGHWYFTLKDDRAQVRCAMFRNANRRTTFRPQNGQQVLVRA 60 Query: 91 KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150 IT + YQ+I ES+ P+G G L ++ K++L EGLF Q K P+P + + V Sbjct: 61 SITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQRLSAEGLFDQQFKQPLPSPARRVGV 120 Query: 151 ITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209 ITS +GA + DILQ + R P L ++I+P VQG E P I AI N E Sbjct: 121 ITSSSGAALHDILQVLQRRDPSLPIVIYPTPVQGAEAPLNIVRAIETANRRDE------C 174 Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHETD T+AD+ ADLRAPTP+ Sbjct: 175 DVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETDVTIADFVADLRAPTPSA 234 Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329 AAE+ + L L Sbjct: 235 AAELVSRNQLELLRQLQ------------------------------------------- 251 Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 + LE ++ + ++ + F+ I +R++ + + + +L+ Q+ +E ++ LR Sbjct: 252 SQQQRLEMAMDYYLAQRQQQFSRINHRLQQQHPHLRLARQQTLLLKLQRRLEDGMQHQLR 311 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + L + Q RI +++ R++ L ++ + + L Sbjct: 312 LSSRRSERAQQRLA--QTQPLGRIHRYQQRVQQQEYRLQQALERQLNAYRQRFGVACSQL 369 Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 ++ + TL RGY+ Q + + + DG + V Sbjct: 370 EAVSPLATLARGYSVTQTPRGEVLKTTQQTQVGEMLKTRLQDGWVESEVKTVT 422 >gi|289209076|ref|YP_003461142.1| exodeoxyribonuclease VII large subunit [Thioalkalivibrio sp. K90mix] gi|288944707|gb|ADC72406.1| exodeoxyribonuclease VII, large subunit [Thioalkalivibrio sp. K90mix] Length = 471 Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats. Identities = 137/501 (27%), Positives = 217/501 (43%), Gaps = 36/501 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 D P +V+EL+ ++ L V V GE+S R +SGH YFSLKD +S + +++ Sbjct: 2 SDAPVLTVTELNQCADGLLRDRLGRVRVEGEVSNLRQY-ASGHQYFSLKDANSSVSCVLF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G +G + G+ + ++QII+E L P+G G LL A ++ K+KL Sbjct: 61 RGNARNAA-RFSDGDAVQIQGRAGIYAARGQFQIIVEQLQPAGEGQLLAAFQRLKEKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP--LRVIIFPVKVQGDECP 187 EGLF + K P+P + VITS G V DI + ++ RFP L ++P VQG + Sbjct: 120 EGLFDPERKKPLPPWTHRLGVITSTQGDVRHDIERTLARRFPLLLPFTLYPTAVQGAQAA 179 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 L++ D+IILARGGGS+EDL FN+E + RAIA S IP+++ + Sbjct: 180 S------QIAAALEQAAREGTVDVIILARGGGSLEDLQAFNEESVARAIAASPIPVVTGV 233 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRA TPT AAE P L+ + R+ + + + TL Sbjct: 234 GHETDTTIADFVADLRASTPTAAAEAVSPDGATLRHRIERARDRMTTLAAQRVAQHRQTL 293 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N+L L + Q + + RLD L+ + + + H+ R+ + Sbjct: 294 NALWTRLERRHPRQLMERNAQRLDDQHERLQRAWQRRHEQAGQRLQHLRLRLAGASPGNR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I R + Q + + + I + +L Sbjct: 354 IASARMRLDHLHQRLARA------------------------APAHDIRAHRERLARLHR 389 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +E+ + + + T R L + + L+RGY +Q + + Sbjct: 390 DLEYQMRQALTIRQQRLEATRRQLNALGPQAVLERGYAILQTEEGQVLRDAARTEIGAPL 449 Query: 486 LINFFDGQANAIVINKAPPKE 506 G V P+ Sbjct: 450 KARLARGALELKVTATKSPEG 470 >gi|238898401|ref|YP_002924082.1| exonuclease VII, large subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259646294|sp|C4K5U1|EX7L_HAMD5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|229466160|gb|ACQ67934.1| exonuclease VII, large subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 448 Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats. Identities = 135/489 (27%), Positives = 230/489 (47%), Gaps = 53/489 (10%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +VS+L+ ++ I+E N+ + + EIS + SSGH YF+LKD +++ +++ Sbjct: 10 LTVSQLNIRVRDILEKNIGQIWLMAEISNF-SQPSSGHWYFTLKDERTQVRCTMFRNNNR 68 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 I F + G++ LV ++ + +YQ+I+ES+ P+G G L E+ KKKL EGLF+ Sbjct: 69 HIFFKVQNGLQVLVRACVSLYEPRGEYQLIVESMEPAGEGILRQKFEQLKKKLAAEGLFA 128 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 +++K P+P K + VITS +GA + DIL+ + R P L V+I+P KVQG+ P +I A Sbjct: 129 EKYKKPLPDSVKQLGVITSISGAALFDILKVLQHRDPSLPVVIYPTKVQGEYAPSQIVKA 188 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + N E D++ILARGGGS+EDL FNDE + RAI +S +PI+SAIGHETD Sbjct: 189 LSIANRRAE------CDLVILARGGGSLEDLSCFNDERVARAIFDSDLPIVSAIGHETDV 242 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++AD ADLRA TP+ AAE + + L + + R+ + L Sbjct: 243 SIADLVADLRASTPSAAAERVTRDRRDIIQKLGSHQQRMAMAMDYYFSKLRQRFVHLSHC 302 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + L R ++ + + ++E II K + H +K + L Sbjct: 303 IEQQHPQLELERQKMQLI--HFKISMEKIIQAKLKGLIHQEAHLKKNVLRRA-------- 352 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + +I+ I++ +++ + Sbjct: 353 -----------------------------------PQIQIYQYQKQIQEEFHQLKAAMER 377 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 KI ++ + L++ + TL RGY+ ++ + + + + + G Sbjct: 378 KIHHYVQRFAVVSSRLETVSPLATLARGYSVTCFSSGSMLKKIEQVQIGDELNTRLQGGW 437 Query: 494 ANAIVINKA 502 + V+ Sbjct: 438 IKSQVLEIK 446 >gi|269140131|ref|YP_003296832.1| exodeoxyribonuclease VII large subunit [Edwardsiella tarda EIB202] gi|267985792|gb|ACY85621.1| exodeoxyribonuclease VII large subunit [Edwardsiella tarda EIB202] gi|304559965|gb|ADM42629.1| Exodeoxyribonuclease VII large subunit [Edwardsiella tarda FL6-60] Length = 460 Score = 350 bits (897), Expect = 5e-94, Method: Composition-based stats. Identities = 136/506 (26%), Positives = 233/506 (46%), Gaps = 57/506 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E + + + EIS +SGH YF+LKD+ +++ +++ + Sbjct: 9 IFTVSRLNQTVRQLLELEMGQIWLSAEISNL-SQPASGHWYFTLKDDKAQVRCAMFRNSN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P+ G + LV IT + YQ+I ES+ P+G G L + K+ L EGLF Sbjct: 68 RRVTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDALKQHLQAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 HK P+P + + VITS +GA + D+L + R P L V+I+P VQG E P ++ Sbjct: 128 DVGHKQPLPSPARCVGVITSASGAALHDVLHVLRRRDPALPVVIYPSAVQGAEAPGQLVR 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N E D++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHETD Sbjct: 188 AIALANQRAE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASHIPIVSAVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 ++AD+ ADLRAPTP+ AAE+ ++ L L++ RL+ + + + L L Sbjct: 242 VSIADFVADLRAPTPSAAAEVVSRNRDELLRRLLSQRQRLDMALDYTLARRRQRLQQLHH 301 Query: 313 ALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L +R + L L R LE ++ + R + R++ H +++ + Sbjct: 302 RLEQQHPQLRLARQQARLLNLRRRLEEAIDTRLRLAERRWRLSGERLQQRSPAHTLRQQQ 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + +E ++++ Sbjct: 362 YRLQQLSHRLE-------------------------------------------SQLQRS 378 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ + S L+ + TL RG++ Q + + ++ +A + Sbjct: 379 VAAR----REHFSALCARLEGISPLATLARGFSVTQRDDGLLLRRREQVAPGDTLRTRLE 434 Query: 491 DGQANAIVINKAPPKEQPTKKCQLHN 516 DG + V P ++ + Sbjct: 435 DGWVESQVTATRPLTAHRPRRAKRSA 460 >gi|196228978|ref|ZP_03127844.1| exodeoxyribonuclease VII, large subunit [Chthoniobacter flavus Ellin428] gi|196227259|gb|EDY21763.1| exodeoxyribonuclease VII, large subunit [Chthoniobacter flavus Ellin428] Length = 458 Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 150/497 (30%), Positives = 240/497 (48%), Gaps = 50/497 (10%) Query: 5 SQKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S + + + P SVSEL+ ++ +E ++ V V GEIS YR SGH YF+LKD S+ Sbjct: 8 SPEPAREEPRVLSVSELTRAVRATLEDHIGQVWVEGEISNYRKQP-SGHQYFTLKDEQSQ 66 Query: 64 IDAIIW-KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + + + +G L + +G+ V G +T + +YQ+ ++++ +G+G L E Sbjct: 67 VACVWFARGGLRMKQVALSDGMHVQVRGALTVYEARGQYQLNVQTVQAAGAGLLQAKFEA 126 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K+KL EGLF + K P+P P I ++TS A +RD+L ++ R P +RV+I PV+V Sbjct: 127 LKRKLEAEGLFDPERKRPLPRFPMTIGLVTSSNAAALRDMLNILARRAPWVRVVINPVRV 186 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +EIA AI + N LKE P D+I++ RGGGSIEDLW FN+E++ RAI S++ Sbjct: 187 QGQGAAQEIAGAIAEFNDLKEQGILP-LDVIVVGRGGGSIEDLWEFNEEIVARAIVQSAV 245 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SA+GHE D+T+AD+AADLRAPTP+ AAE+ VP E L+ + ARL L+ Sbjct: 246 PVVSAVGHEIDFTIADFAADLRAPTPSAAAELIVPDGEALRRYFVESRARLQRCAAGLLL 305 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + N L L + + L R R+ E I Sbjct: 306 RERNRLTYLSRV-ASPQTLLRTLREYTQRVDMAGEILRRTI------------------- 345 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 ++Q + + L + L + R R+ T + Sbjct: 346 --------------QEQRLAAERRLLDLRARLREHLPDRHLPLYRH----RLAAAQTRLA 387 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 ++ + +L++ + TL RGY+ I +++A Sbjct: 388 NC-------ARANLQKLQQRFAHAETLLKALSPDATLARGYSITSVQGGAIIRSAKDVAP 440 Query: 482 KTRILINFFDGQANAIV 498 +T++ DG +++V Sbjct: 441 QTKLTTRLKDGTIDSVV 457 >gi|227112676|ref|ZP_03826332.1| exodeoxyribonuclease VII large subunit [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 438 Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats. Identities = 136/490 (27%), Positives = 218/490 (44%), Gaps = 53/490 (10%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 + + + GEIS SSGH YF+LKD +++ +++ + K+ F P+ G + L+ Sbjct: 1 MGQIWLSGEISNL-SQPSSGHWYFTLKDERAQVRCAMFRTSNRKVTFRPQNGQQVLIRAS 59 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 IT + YQ++ ES+ P+G G L E+ K++L EGLF Q K +P K + VI Sbjct: 60 ITLYEPRGDYQLLAESMQPAGDGLLQQQFEQLKQRLAAEGLFDQQFKQVLPSPAKQVGVI 119 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 TS +GA + DILQ + R P L VI++P VQG E P +I AI N E D Sbjct: 120 TSASGAALHDILQVLQRRDPSLPVIVYPTSVQGAEAPLQIVRAIELANQRDE------CD 173 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 ++I+ RGGGS+EDLW FNDE + RAI S IPI+SA+GHETD T+AD+ DLRAPTP+ A Sbjct: 174 VLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETDVTIADFVGDLRAPTPSAA 233 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 AE+ + L + + RL + + + L L L +R Sbjct: 234 AELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRNRYFTRLHHRLQQQHPQLRLARQ---- 289 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + K RQ + + Q Q+ + R Sbjct: 290 --------------------------------QAQLVKLRQRLDDAMQQ--QLRQTSRRS 315 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 L+++ + + R+ ++L +++ + ++ + I L+ Sbjct: 316 ERLQQRLMQQQPQTRIHRAQQRL-------QQLSYQMQSAVERQLNQNKQKLGIACSRLE 368 Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 + TL RGY + + ++ + DG + V AP + K Sbjct: 369 GVSPLATLARGYNVTTAPDGKVLKNVAQISPGETLKTRLQDGWVESQVTTLAPNQNAVKK 428 Query: 511 KCQLHNNKRE 520 + + + + Sbjct: 429 RRKPSSPTPK 438 >gi|224826271|ref|ZP_03699373.1| exodeoxyribonuclease VII, large subunit [Lutiella nitroferrum 2002] gi|224601372|gb|EEG07553.1| exodeoxyribonuclease VII, large subunit [Lutiella nitroferrum 2002] Length = 451 Score = 349 bits (896), Expect = 6e-94, Method: Composition-based stats. Identities = 141/493 (28%), Positives = 236/493 (47%), Gaps = 57/493 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVS L+ + ++ES L + + GEIS + +SGHAYF LKD ++I ++++ L Sbjct: 12 SVSALNRMARDLLESGLPALWIGGEISNLT-LAASGHAYFLLKDGSAQIRCVMFRHKLAG 70 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P EG++ + G +T + +YQI ++S+ +G G L A EK K+KL EGLF Sbjct: 71 LGFRPGEGMQVELKGLVTLYEARGEYQINVDSMRSAGLGRLFEAYEKLKQKLTAEGLFDA 130 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 K PIP P I ++TSP A +RD++ + R P + VI++P +VQG +++A AI Sbjct: 131 ARKRPIPAHPAAIGIVTSPAAAALRDVVTTLRRRMPSIPVILYPSQVQGQGSAEQLAAAI 190 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + D++I+ RGGGSIEDLW FN+E + RAIA IP++S +GHETD+T Sbjct: 191 QR------AGERREVDVLIVCRGGGSIEDLWSFNEEGVARAIAACPIPVVSGVGHETDFT 244 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D+ AD RAPTPT AAE+ P +EHLQ + L + RL+ K L+ L + L Sbjct: 245 ISDFVADRRAPTPTAAAELVSPSREHLQGQVELARRHLARALGRLLTDKAQRLDFLSRRL 304 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R L L +++ ++ ++ +R++ Sbjct: 305 KHPGEHLRRQRESLRLAEDRLRRHVQGLLEQRRWRLQLAESRLRRHRP------------ 352 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + QH++Q+ +L + Sbjct: 353 DLAQHVQQL-------------------------------------DRLSEALHRAGDGW 375 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 + ++ L++ + L+RGY +Q + + L R+ + +G+ Sbjct: 376 VGRHRLTLVRLAGTLEAMNPQAVLERGYAIVQKADGRAVRSPLELLNHERVTLQLAEGRT 435 Query: 495 NAIVINKAPPKEQ 507 AI+ + A + + Sbjct: 436 EAIIDHPAGAQPE 448 >gi|167628422|ref|YP_001678921.1| exodeoxyribonuclease vii, large subunit [Heliobacterium modesticaldum Ice1] gi|167591162|gb|ABZ82910.1| exodeoxyribonuclease vii, large subunit [Heliobacterium modesticaldum Ice1] Length = 455 Score = 349 bits (896), Expect = 6e-94, Method: Composition-based stats. Identities = 133/487 (27%), Positives = 240/487 (49%), Gaps = 54/487 (11%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +SV++L+ +++ ++E L+ + V+GEIS ++ H+SGH YF+LKD S + A++++ Sbjct: 3 KIWSVTQLNTYIQGLLEAAPRLTDLWVQGEISNFKH-HTSGHMYFTLKDRESVVKAVMFR 61 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + F PE G++ ++ G+++ +P YQI E + P+G G + ALE+ K++L + Sbjct: 62 GKNRCLSFRPENGLKVILRGQVSVYPRDGIYQIYAEEMEPAGLGGIFLALEQVKQRLAAD 121 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ + K P+P +P+ + ++T+PTGA IRD+ + RFP + + P VQG+E Sbjct: 122 GLFAAERKRPLPLLPRKVGIVTAPTGAAIRDLFSVLQRRFPTMNIAFAPAVVQGEEAVPS 181 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + A+ ++ P D++I+ RGGGS EDLW FNDE + RAIA +P++SA+GH Sbjct: 182 LIRALQRIVR------VPGVDVVIIGRGGGSREDLWAFNDEALCRAIAACPVPVVSAVGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E+D +L D AD+RA TP+ AAE+ VP Sbjct: 236 ESDVSLTDLVADMRAATPSAAAELVVP--------------------------------- 262 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 S R+D L +L+ + + + R+ R + + R D + ++ Sbjct: 263 ----------LYSALHGRVDDLALQLQRAMTVRLARERRALSALAGRPSLDNPLLRLRAP 312 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 RQ + + ++ + + V R L ++ K +L + R+ I+ L R+ Sbjct: 313 RQRVDQFEERLRRAV-SLSRAAQLRRRLKELEGRLLSASSPQRLCPRRERIEDLKHRLIA 371 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + + +++ +L + + L RG+ D+ + +A R+ I Sbjct: 372 LSEKGLHGRRRELAMQAGLLDALSPLAVLDRGFALCLDSAGQVLRDSAAVAEGERVDIVL 431 Query: 490 FDGQANA 496 G+ Sbjct: 432 QRGELTC 438 >gi|254513980|ref|ZP_05126041.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium NOR5-3] gi|219676223|gb|EED32588.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium NOR5-3] Length = 460 Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats. Identities = 140/504 (27%), Positives = 234/504 (46%), Gaps = 49/504 (9%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N + S+L+ ++ ++ES+ S V V GEIS SSGH YF+LKD+ +++ Sbjct: 2 NQTQAETLTPSQLNRQVRSLLESHFSFVWVEGEISNL-ARPSSGHWYFTLKDDKAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++ F P+ G + + +++ + G ++Q+I E + P+G+G L E + +L Sbjct: 61 MFKNYNQRLRFNPQNGDQVRLRARVSLYEGRGEFQLIGEFMEPAGAGALQARFEALRDQL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K +P +AVITSPTGA ++DIL ++ R P +RV + PV VQG Sbjct: 121 RQEGLFDAGIKQALPRSVAHLAVITSPTGAALQDILHVLARRNPSIRVTVLPVSVQGTSA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI A+ N + R D +ILARGGGS+EDLW FNDE + RAI S +P++ Sbjct: 181 AAEIRQALRDANYSAKTRDDCDFDAVILARGGGSLEDLWAFNDEALARAIVASELPVVCG 240 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D T+AD+AAD RAPTP+ AAE+ +E L + L RL+ + ++ Sbjct: 241 VGHEVDVTIADFAADARAPTPSAAAELLSDDREELLAQLEQSRKRLSRAMHHHLERANLQ 300 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ L L + L RLD L L + + + + R N +R+++ I Sbjct: 301 LSQLRARLRHPGDRLREQSQRLDELEGRLRRAMNLRLDQLRRDLNVRSDRLRTHSPGRRI 360 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +++++H+ Q ++ + +++ + Sbjct: 361 EQHQEHL----QRQRVALRVAMGQKLAWQRQALQRR------------------------ 392 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++L S L RGY+ + D I +A K ++ Sbjct: 393 -------------------EQVLASLNPLAILDRGYSILSDGQGTVIRASTEVAAKQKLY 433 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 G V + ++ +K Sbjct: 434 ARLAQGSLELRVEAQQREDDKNSK 457 >gi|152980028|ref|YP_001354275.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp. Marseille] gi|189037844|sp|A6T178|EX7L_JANMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|151280105|gb|ABR88515.1| exodeoxyribonuclease VII large subunit [Janthinobacterium sp. Marseille] Length = 453 Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats. Identities = 140/490 (28%), Positives = 221/490 (45%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS L+ + ++E N V GEIS + +SGH YF+LKD+ +++ A++++G Sbjct: 16 VLSVSALNQAVSRMLERNFPLSWVSGEISNFTC-AASGHWYFTLKDSAAQVRAVMFRGRA 74 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F+P EG + V +T + YQ+ +E++ +G G L A + K+KL EGLF Sbjct: 75 QYADFMPREGDKVEVRALVTLYAPRGDYQLSVEAIRRAGVGNLYEAFLQLKEKLNAEGLF 134 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K IP + I ++TSP A +RDIL + R P +RVI++P VQG+ +IA Sbjct: 135 DPARKRAIPSFARTIGIVTSPQAAALRDILTTLQRRAPHVRVILYPTPVQGEGSANKIAQ 194 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++++ RGGGSIEDLW FN E++ R I IP+I +GHETD Sbjct: 195 AIATASARAE------CDVLLVCRGGGSIEDLWSFNHELVARTIVGCDIPVIVGVGHETD 248 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+AADLRAPTPT AAE+A + + L + ++ R + TL+ L + Sbjct: 249 FTIADFAADLRAPTPTAAAELAATPRADWLARLEAQADDMRYVLKRQLSDTAQTLDWLSR 308 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + ++ R +L L L H I + + + NR S Sbjct: 309 RLISPAAYIAHERMKLQNLQARLGHATRIPLSKAQFALAQLRNRWLSQLP---------- 358 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + Q + I + Q N I + L ++ Sbjct: 359 -DTQAQRL----------------HVINHARRMSNQINNHIASQRQSLAALSAQL----- 396 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + TL+RGY I D + + L + + + DG Sbjct: 397 -----------------EMLNPQRTLERGYAMITDEKGKIVRAPKELQPRQSVTVRLADG 439 Query: 493 QANAIVINKA 502 A + + Sbjct: 440 TAQVGIASVQ 449 >gi|170718482|ref|YP_001783696.1| exodeoxyribonuclease VII large subunit [Haemophilus somnus 2336] gi|168826611|gb|ACA31982.1| exodeoxyribonuclease VII, large subunit [Haemophilus somnus 2336] Length = 444 Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats. Identities = 138/492 (28%), Positives = 222/492 (45%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVS+L+ ++ ++E L V + GEIS + SGH YFSLKD ++++ ++ Sbjct: 2 TQAKIYSVSQLNQSVRQMLEGQLGSVWLTGEISNFT-QPVSGHWYFSLKDENAQVRCAMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F + G++ LV ++ + YQ+IIES+ +G G L E K L Sbjct: 61 RMKNMRVGFKAQNGMQVLVRASVSLYEPRGDYQLIIESMNLAGDGLLQRQFEALKLTLAA 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K +P K + +ITSPTGA ++DIL + R P L V+I+P VQG E Sbjct: 121 EGLFAQHYKKNLPHFAKSVGIITSPTGAALQDILHILQRRDPSLHVVIYPTAVQGKEATA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI I N +E D++I+ RGGGS+EDLW FN+E + RAI +S +PIISA+G Sbjct: 181 EIVQMIELANQRRE------VDVLIVGRGGGSLEDLWCFNEERVARAIFHSELPIISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306 HE D T+AD+ AD+RAPTP+ AAE+ ++ L L + RL + R + K+ Sbjct: 235 HEIDVTIADFVADVRAPTPSAAAELVSRHQQELLDQLFYRKQRLEMALDRFFQQKVKLLQ 294 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L+ + + +L L L + +K + + R+ + L + + Sbjct: 295 RLQFRLQQQHPQSQLNIQQKMMQQLLHRLHLALSTFVDKKQQKMTALCRRLDNSPLPYYV 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 QK Q +++ + + Sbjct: 355 QKQHQILVQLELRL---------------------------------------------- 368 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 L K K+ +S L S + L RGY+ ++ + + I Sbjct: 369 -NSGLQKKFKNADYQLSRLCGKLDSLSPLKVLARGYSITKNQQGQALKNSLQIEVGQLIS 427 Query: 487 INFFDGQANAIV 498 G + V Sbjct: 428 TQLERGIIVSRV 439 >gi|71908824|ref|YP_286411.1| exodeoxyribonuclease VII large subunit [Dechloromonas aromatica RCB] gi|71848445|gb|AAZ47941.1| Exodeoxyribonuclease VII large subunit [Dechloromonas aromatica RCB] Length = 450 Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats. Identities = 138/506 (27%), Positives = 220/506 (43%), Gaps = 59/506 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + SV+ L+ ++ +ES V GEIS SSGH YFSLKD+ + Sbjct: 2 PAPTSPVSNT-VLSVASLNRLVRDCLESAFPLTWVGGEISNLT-YASSGHVYFSLKDSSA 59 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ +IW+ + + E G + ++ + ++Q+ IE++ +G G L + Sbjct: 60 QVRCVIWRSRAQLLGWRLENGQKIEARALVSFYEPRGEFQLNIEAVRRAGQGDLFERFLR 119 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K +L EGLF+ + K PI P+ IA+++S A +RD+L + R P LR+ IFP V Sbjct: 120 LKAQLEAEGLFAPESKRPIAPFPRHIAIVSSLQAAALRDVLTTLHRRAPHLRITIFPSLV 179 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ ++IA A+ Q + D IIL RGGGSIEDLW FN+E + RAI S+I Sbjct: 180 QGEGASQKIAEALGQASAS-------DCDTIILCRGGGSIEDLWAFNEECVARAIRASAI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+I+ +GHETD+T+AD+AADLRAPTPT AAE+ P ++ L + L LE +L + R + Sbjct: 233 PVIAGVGHETDFTIADFAADLRAPTPTAAAELVSPDRDSLLTRLSQLEGQLQRRVERGLA 292 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + ++ L L + + + + + L + L+ Sbjct: 293 DQQQRIDWLGSRLVHPAERIRLRQQENEALSQRLQRA----------------------- 329 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L+ + R + Q R L ++ Sbjct: 330 LLRQMDHARLQLTTLGQRQATARP--------------------------RPELLARTLE 363 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L R+ + ++ + L+ L RGY + I L Sbjct: 364 HLRHRLGKQTQWALSQHSGKLNSLSSSLKQLDPHAVLTRGYALAIGPDGRAIRNASALTP 423 Query: 482 KTRILINFFDGQANAIVINKAPPKEQ 507 + ++F G A A V E Sbjct: 424 GDALKLSFAQGTATATVNQVVAMPEA 449 >gi|85059728|ref|YP_455430.1| exodeoxyribonuclease VII large subunit [Sodalis glossinidius str. 'morsitans'] gi|123519087|sp|Q2NS50|EX7L_SODGM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|84780248|dbj|BAE75025.1| exodeoxyribonuclease VII large subunit [Sodalis glossinidius str. 'morsitans'] Length = 458 Score = 349 bits (895), Expect = 8e-94, Method: Composition-based stats. Identities = 140/503 (27%), Positives = 234/503 (46%), Gaps = 57/503 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E + + + GEIS + +SGH YF+LKD+ +++ +++ T Sbjct: 9 IFTVSRLNKTVRELLEGEMGQIWLTGEISNF-SQPASGHWYFTLKDDRAQVRCAMFRNTN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P G + LV +T + YQ+I ES+ P+G G L E+ K++L +EGLF Sbjct: 68 RRTTFAPRNGQQVLVRASLTLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLSDEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 S Q K P+P + + VITS +GA + DILQ + R P L V+I+P VQG E P +I Sbjct: 128 SQQFKQPLPSPARRVGVITSASGAALHDILQVLQRRDPSLPVVIYPTAVQGQEAPAQILR 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ N E D++I+ RGGGS+EDL FNDE + RAI S +P++SA+GHETD Sbjct: 188 ALEAANRRAE------CDVLIVGRGGGSLEDLASFNDERVARAIFASRLPVVSAVGHETD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD+ ADLRAPTP+ AAE+ + L L + + RL + + + + L Sbjct: 242 VTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRLEMAMDYFLAQRQQRYSRLQH 301 Query: 313 ALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L +R L R L+ ++ + + R +++ R+ I + + Sbjct: 302 RLQQQHPQLRLARQHTALMTLRRRLDDGVQGQLRQAQRRHDYVRQRMVQQAPAARINRAQ 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + + Q Sbjct: 362 QRLQALRYQLSQG----------------------------------------------- 374 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +S ++ + + L+ + TL RG++ D++ + Q R L+ R+ Sbjct: 375 ISLRVNRQNNAFVALCSRLEGMSPLKTLARGFSVTTDSHGAVVKQTRQLSAGDRLTTRLR 434 Query: 491 DGQANAIVINKAPPKEQPTKKCQ 513 DG + V + ++ Q Sbjct: 435 DGWVESQVTEITRQPARRPRRSQ 457 >gi|291613834|ref|YP_003523991.1| exodeoxyribonuclease VII, large subunit [Sideroxydans lithotrophicus ES-1] gi|291583946|gb|ADE11604.1| exodeoxyribonuclease VII, large subunit [Sideroxydans lithotrophicus ES-1] Length = 459 Score = 349 bits (895), Expect = 8e-94, Method: Composition-based stats. Identities = 148/496 (29%), Positives = 238/496 (47%), Gaps = 57/496 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + SV EL+ K ++E L + VRGEIS + +SGH YFSLKD +++ ++++ Sbjct: 19 NHVLSVRELNLAAKQLIEGGLPLLWVRGEISNFVS-AASGHWYFSLKDEQAQVRCVMFRH 77 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 +EF P G++ V+ T + +Q+ +E + P+G G L A E K KL EG Sbjct: 78 KSQYLEFKPSNGMQVEVLALATLYEARGDFQLTLEKMRPAGLGALYEAFEHLKNKLEAEG 137 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF K +P +PK I ++TSP A +RD+L+ ++ R P + V+++P VQG+ ++I Sbjct: 138 LFDAGRKRDLPLLPKQIGIVTSPQAAALRDVLRTLANRMPNVPVLLYPTPVQGEGAAQKI 197 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI + E D++I+ RGGGSIEDLW FN+E++ RAIA S IP++S +GHE Sbjct: 198 AQAIRLASQRAE------CDVLIVCRGGGSIEDLWAFNEEVVARAIAASHIPVVSGVGHE 251 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ ADLRA TPT AA+ VP K+ L+ L RL + R + + ++ L Sbjct: 252 TDFTIADFVADLRAATPTAAAQAVVPDKQELRQRLAQHRQRLVRAVARRFEQGMQQVDFL 311 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + Q + RL+ L + + + + R+ ++ L H ++ R Sbjct: 312 QHRLVHPAQRIRQQGERLEALQQRMRFAHDHAMQRQQGRWSM---------LWHRLRGAR 362 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 ++ Q+ + ++ + A L LR+ Sbjct: 363 PNLARLQEQQSNLARRLNGAMLQTLDRHDARLTALRQH---------------------- 400 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 LQ K L RGY+ ++D N + +L ++ I F Sbjct: 401 ------------------LQLLDPKQVLARGYSMVRDVQGNIVVSSDSLELGEKLDITFA 442 Query: 491 DGQANAIVINKAPPKE 506 G +A+V K P Sbjct: 443 QGGVHAVVQEKHEPNS 458 >gi|94268197|ref|ZP_01291113.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1] gi|93451692|gb|EAT02469.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1] Length = 445 Score = 349 bits (894), Expect = 8e-94, Method: Composition-based stats. Identities = 148/497 (29%), Positives = 242/497 (48%), Gaps = 55/497 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 +N D+ +VSEL+ ++ ++E++ + V V GEIS R +SGH YF+LKD H+ Sbjct: 2 EADMENPFDNRIQTVSELTRSIRGLLETSYNMVTVSGEISNLR-RPASGHLYFTLKDAHA 60 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ +++KG + P +G+E L G+++ + +YQ+I++ + G+G L A ++ Sbjct: 61 QLRGVLFKGQQRYLACNPADGLEVLCRGRLSVYEPRGEYQLIVDFMDGKGAGLLRVAFDR 120 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKV 181 K KL EGLF K P+PF+P+ IA++TSP GA +RD L + P + I PV+V Sbjct: 121 LKAKLEAEGLFEPARKKPLPFLPRRIALVTSPQGAAVRDFLTQAGKLCPFTAIEIMPVRV 180 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD EIA+AI QLN + +II+L RGGGS+EDLW FN+E + RAIA S I Sbjct: 181 QGDGAAAEIADAIHQLNERQ------SSEIIVLCRGGGSLEDLWAFNEEAVARAIAASQI 234 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SA+GHE D+T+AD ADLRAPTPT AA + +P E L + L RL + R + Sbjct: 235 PVVSAVGHEVDYTIADLVADLRAPTPTAAARLILPDGEQLLAQARELSHRLAAAMRRHLL 294 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L + + L + + L+ RLD L +L L+ + + + + ++ Sbjct: 295 EARRRLEAEQRLLRDPARGLAQHAIRLDYLRADLARALQGRLRHRRQRLLAWEHALQRLD 354 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + +R + E Q + +++ + Sbjct: 355 PRRRLTAHRAMLQENQLRLSFLMR-----------------------------------Q 379 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L R +S IL++ + L RGY + + + + A Sbjct: 380 LLSER------------RNQLSRAAAILEAVSPLAVLGRGYAIARRPDGTILRSVKEAAP 427 Query: 482 KTRILINFFDGQANAIV 498 + + DG + ++ Sbjct: 428 GAPLRLTLHDGDLHCVI 444 >gi|237808918|ref|YP_002893358.1| exodeoxyribonuclease VII, large subunit [Tolumonas auensis DSM 9187] gi|259646301|sp|C4L8C6|EX7L_TOLAT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|237501179|gb|ACQ93772.1| exodeoxyribonuclease VII, large subunit [Tolumonas auensis DSM 9187] Length = 448 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 219/494 (44%), Gaps = 57/494 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ ++E + V + EIS HSSGH YF+LKD ++I A ++KG Sbjct: 8 IYTVSRLNNVVRLLLEQEMGLVWLTAEISNLV-QHSSGHWYFTLKDQQAQIRAAMFKGQN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P+ G + LV G+++ + YQ+I+E + P+G G L LE K +L+ EGLF Sbjct: 67 RRVSFRPQNGQQILVQGQLSLYEARGDYQLIVEKMQPAGDGLLQMKLEALKARLMAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K +P PK I +ITSPTGA I D+L ++ R P L VI++P VQG+ + N Sbjct: 127 DPRRKRALPTQPKQIGIITSPTGAAIHDMLTILARRDPALPVILYPSAVQGESAVPALLN 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ E D++I+ RGGGS+EDLW FNDE++VRAIANS IPI+SA+GHETD Sbjct: 187 ALETAWRRNE------CDLLIIGRGGGSLEDLWCFNDELVVRAIANSPIPIVSAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL+D+AADLRAPTP+ AAE+ ++ L + RL I ++ Sbjct: 241 VTLSDFAADLRAPTPSAAAELVSRDQQQQLHRLAQYQHRLQQAIQLRLQQHQIAWQQQYA 300 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L N L + D L LE + + + + + R++ + + Sbjct: 301 RLNTQNPRYQLQQKIQKQDELQFRLERVMTQTLVQANQQWMSQHQRLQQVSPKRQLPNLQ 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + Q + ++ + Sbjct: 361 KQHAYLYQRLLNAMQSKQQDSAQTLSR--------------------------------- 387 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + L + + L RGY+ + I + + T + + Sbjct: 388 --------------LSGQLHALSPLQVLARGYSVTTNAKGELIHSSQQVTTGEMLNVQLH 433 Query: 491 DGQANAIVINKAPP 504 G Sbjct: 434 QGTLKVRTEEVKSE 447 >gi|227873693|ref|ZP_03991926.1| exodeoxyribonuclease VII [Oribacterium sinus F0268] gi|227840461|gb|EEJ50858.1| exodeoxyribonuclease VII [Oribacterium sinus F0268] Length = 472 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 134/508 (26%), Positives = 234/508 (46%), Gaps = 42/508 (8%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + + EY+VS+++ +L +++ + SH+ V GEIS + SGH YF+LKD S++ I Sbjct: 1 MANKEYTVSQVNRYLARMMQEDFFLSHITVSGEISNLKMHP-SGHIYFTLKDQASQLSGI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F E G++ L G+I + YQI +S +G G L E KK+L Sbjct: 60 MFAGKRAGLAFPLENGMKVLCSGRIGVYEAGGSYQIYADSFQKAGQGDLYLRFEALKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 E GLF +K PIP + I ++T+ +GA +RDI+Q R P + ++P VQG+ Sbjct: 120 QEMGLFDAMYKKPIPKYARKIGIVTASSGAAVRDIIQIAKRRNPFVELFLYPALVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I +L+ + D++I+ RGGGSIEDLW FN+E + +AI N+ PIISA Sbjct: 180 VASICKGIARLDQM-------GLDVLIVGRGGGSIEDLWAFNEEAVAKAIFNADTPIISA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD+ +DLRAPTP+ AAE+AV L + + + R+I+ Sbjct: 233 VGHETDTTIADFVSDLRAPTPSAAAELAVFDYMQFVDDLASYTYSFHQRMERIIQKMRQR 292 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + + L ++R+ L + +E+ I L + Sbjct: 293 VKEEELRFSVLHPRNILQGKQHRILDLESRFQRQMELCIQENKSAL-----------LPY 341 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + K+++ + + K +I ++ Sbjct: 342 RVFPQW-----------------MERKLTNAKDRMGEYQVFPHKMKEKILLAKNKEERYR 384 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ K++ ++I + + + L +G++ +Q + ++ + Sbjct: 385 H-FPSLMEGKLEKKKHQLAILSEQFDALSPLRLLSKGFSYVQREDGKRMSSVEQVKMGEI 443 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKC 512 + I+F DG A A V+ K + +K Sbjct: 444 LQIHFTDGTAKAKVLEKQKEERLGAEKP 471 >gi|77359600|ref|YP_339175.1| exodeoxyribonuclease VII large subunit [Pseudoalteromonas haloplanktis TAC125] gi|123744167|sp|Q3IHJ4|EX7L_PSEHT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|76874511|emb|CAI85732.1| exonuclease VII, large subunit [Pseudoalteromonas haloplanktis TAC125] Length = 444 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 139/490 (28%), Positives = 223/490 (45%), Gaps = 57/490 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS L+ ++ ++E + + + GEIS + +SGH YFSLKD+ ++I A +W+G Sbjct: 9 IYTVSRLNREIRALLEQGFASLVLTGEISNFIT-PASGHWYFSLKDDKAQIKAAMWRGNN 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + P G + V +++ + YQ+I+E + P+G G + K +L EGLF Sbjct: 68 RNQSYRPINGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQFKQEFDALKMRLAAEGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 S +K P+P I VITS TGA I+DIL + R P L VII+P VQG + ++ Sbjct: 128 SSVYKKPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKDAHLQLIK 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N E D++IL RGGGS+EDLW FN E + RAI NS +PI+SA+GHE D Sbjct: 188 QIELANIRSE------VDVLILGRGGGSLEDLWCFNHEQLARAIFNSQLPIVSAVGHEID 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T++DY AD+RA TP+ AAE+ P + L + + L RL N + K L Sbjct: 242 TTISDYVADVRAATPSAAAELVSPNTQELHNKVTQLVNRLANAFKHDMSEKRAQALQLQH 301 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + L+ RLD L L+ + ++++ R N++ R+ + + Sbjct: 302 RLNLCHPRNQLNQKAQRLDELSIALQQAMRNSLYQQERTLNNLTPRLMRQSPDKKLTQAS 361 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + Q + Q ++Q L+ + Sbjct: 362 HQLAQLQTRLNQAIQQQLQQANNSLALQ-------------------------------- 389 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L S + N L RGY+ + + ++ ++ Sbjct: 390 ---------------ASRLDSVSPLNVLARGYSITKTDKQKVVKSVADVKVGDTLITELV 434 Query: 491 DGQANAIVIN 500 DG ++ V++ Sbjct: 435 DGTLHSQVLS 444 >gi|189424974|ref|YP_001952151.1| exodeoxyribonuclease VII large subunit [Geobacter lovleyi SZ] gi|189421233|gb|ACD95631.1| exodeoxyribonuclease VII, large subunit [Geobacter lovleyi SZ] Length = 454 Score = 349 bits (894), Expect = 9e-94, Method: Composition-based stats. Identities = 159/503 (31%), Positives = 248/503 (49%), Gaps = 61/503 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN F+++ +VS L+ LK ++E N S V GE S +SGH Y +LKD+ Sbjct: 1 MNLFAEQT-----ILTVSRLTSLLKDLIEDNFSQVWAEGEASNLT-YAASGHVYCTLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + ++++ ++ ++F EEG+ +V G+++ + +YQ+I E P G G L A Sbjct: 55 GAMLRCVMFRSSVKALKFKLEEGMALVVRGRLSVYDQRGEYQLIAEYAEPKGLGALQAAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 + K++L EGLFS+ HK P+PF+P+ + ++TS +GA I DIL + R L +I++PV Sbjct: 115 VQLKERLAGEGLFSESHKQPLPFMPQKVGIVTSASGAAIHDILNVLGRRNAGLHLIVYPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG EIA AI LN L D++I+ RGGGS+EDLW FN+E++ RA+ S Sbjct: 175 RVQGVGSAAEIAAAIDNLNRLNAA------DVLIVGRGGGSLEDLWAFNEELVARAVYRS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETDWT+ D+ ADLRAPTP+ AAE+ +E L + + NL RL+ I Sbjct: 229 RIPVISAVGHETDWTICDFVADLRAPTPSAAAELVCTAREELLNQIQNLVLRLDQAISSQ 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 +K +I+ L L +AL + + L R+D L L+ L + R + Sbjct: 289 LKLRIHNLAGLRRALHDPSRMLGHQLQRVDDLSERLDMALRNLFGRHREQLARQEQHLAG 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 I K RQ +L +H E+ V L + E+ E A Sbjct: 349 LHPAIQISKLRQKLLLLTEHAERRVTSQLEQLGRERGEATA------------------- 389 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRN 478 L++ + +TL RG++ + + T+ + I Sbjct: 390 ----------------------------RLEALSPLHTLARGFSVVERQTDKHIIRNAAE 421 Query: 479 LATKTRILINFFDGQANAIVINK 501 LA I + G A + Sbjct: 422 LAIGEEIRLRLHQGCALCRIEET 444 >gi|332289770|ref|YP_004420622.1| exodeoxyribonuclease VII large subunit [Gallibacterium anatis UMN179] gi|330432666|gb|AEC17725.1| exodeoxyribonuclease VII large subunit [Gallibacterium anatis UMN179] Length = 454 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 143/498 (28%), Positives = 231/498 (46%), Gaps = 57/498 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 YS+S+L+ K I+E L + + GEIS + SGH YF+LKD ++++ A +++ Sbjct: 10 IYSISQLNRLAKEILEQELGSLWLSGEISNFT-QPVSGHWYFTLKDKNAQVRAAMFRMRN 68 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P+ G++ +V I+ + YQII+ES+ P+G G L E+ K KL EGLF Sbjct: 69 LRVNFKPQNGMQVVVRANISLYEPRGDYQIIVESMQPAGEGLLQQQFEQLKMKLAAEGLF 128 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + Q+K IP + I VITS +GA + DILQ + R P L VII+P VQG E ++I Sbjct: 129 AQQYKKEIPAYCRKIGVITSASGAALHDILQILRRRNPTLEVIIYPTLVQGKEAAQDIVA 188 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I N E D++I+ RGGGS+EDLW FN+E++ RAI S IPIISA+GHETD Sbjct: 189 SIEIANKRHE------CDVLIVGRGGGSLEDLWCFNEEIVARAIFASQIPIISAVGHETD 242 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD+ ADLRA TP+ AAE+ ++ L + L+ RL + + L L Sbjct: 243 VTIADFVADLRASTPSAAAELLSRDQKELWQKIDYLQQRLEIAFTYKLNRYLQRLERLQL 302 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + L + + L + L + + R+ + + R+ L I+ + Sbjct: 303 RLKNQHPQARLQLQQQQYLYLQQRLTQAIADYLQRRQQLQASLSQRLSQLPLTLQIETQQ 362 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + Q ++ + + + + L R Sbjct: 363 RTLNHWQTRLQTAINTF-------------------------LQHQQHKLANLGGR---- 393 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L + + L+RGYT + ++ + + I Sbjct: 394 ------------------LDNISPLKVLQRGYTVTTSLDTKLVSSIKQVTIGQEIATRTV 435 Query: 491 DGQANAIVINKAPPKEQP 508 DG+ + + P ++ Sbjct: 436 DGKLISQITRIEPFADKK 453 >gi|47076768|dbj|BAD18311.1| exodeoxyribonuclease VII large subunit [Geobacillus stearothermophilus] Length = 448 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 145/498 (29%), Positives = 240/498 (48%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V L+ ++K V+ +L + V+GEIS ++ HS GH YF+LKD+ +RI A+ Sbjct: 1 MEVKYVTVGALTKYIKRKFDVDPHLRDLWVKGEISNFK-QHSRGHMYFTLKDSQARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F PE+G+ LV G+I+ + + YQ+ ++ + P G G L A E+ K++L Sbjct: 60 MFAGYNQHLPFRPEDGMNVLVRGEISVYEPNGNYQLYVKEMQPEGIGRLYLAYEQLKQRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS HK P+P P+ I V+TSPTGA +RDI+ I R+PL ++I+FP VQGD Sbjct: 120 EAEGLFSPVHKKPLPAFPRCIGVVTSPTGAAVRDIMTTIRRRYPLAKIILFPALVQGDGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI + N D++I+ RGGGSIE+LW FN+E++ RAI S +P+ISA Sbjct: 180 ALSIVRAIERANEF------GGVDVLIVGRGGGSIEELWAFNEEIVARAIFASRVPVISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+A P L L + R+ + + Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAAPHVGELAERLAERKWRMIRAMKEQLAASQER 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + + +LD L L E ++ +K + + + R+ Sbjct: 294 LRRLQASYAFRYPRRLYEQKEQQLDVLLDRLARQRERLLDKKRQQWRELRLRLWRHHPAA 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ ++ +E+ + + + + + Sbjct: 354 ELERMKERQKAAAGALEKAM-------------------------RTALERHALRFRSHV 388 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ ++ + ++RGY+ + + + + L R Sbjct: 389 ARL----------------------EALSPLRIMERGYSLVYNERRELVKRIGQLQVGER 426 Query: 485 ILINFFDGQANAIVINKA 502 + I DGQ + V Sbjct: 427 LSIRIQDGQVDCQVTGVE 444 >gi|332967828|gb|EGK06927.1| exodeoxyribonuclease VII large subunit [Kingella kingae ATCC 23330] Length = 449 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 133/489 (27%), Positives = 228/489 (46%), Gaps = 57/489 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ ++++ S V + GEIS +SGH YF+LKD+H+++ ++K T Sbjct: 10 LSVSELNQAADALLDNEFSDVWISGEISNLT-RAASGHYYFALKDDHAQVRCALFKFTAA 68 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ +EG V GKI + ++QI I + G G L E+ K +L EGLF Sbjct: 69 RLAVPLKEGDAVEVRGKIGIYGARGEFQITINEVRSLGLGQLFERYERLKARLQAEGLFD 128 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K +P PK I ++TS A +RD++ + R P + +I++P VQG + IA A Sbjct: 129 ESRKQTLPEHPKAIGIVTSLAAAALRDVVSTLKRRAPQIPIIVYPTPVQGAGSEQHIAQA 188 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I++ + +E D++I+ RGGGS+EDLW FN+E V AIA ++P++S +GHETD+ Sbjct: 189 IMRAHQRRE------VDVLIVCRGGGSLEDLWAFNEEATVCAIAACTLPVVSGVGHETDF 242 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TLAD+ AD+RAPTPT AAE+ P + + L +R + + +Y ++ L + Sbjct: 243 TLADFVADVRAPTPTAAAELVSPNRAEQLRHVQQLWSRAQQNMTQRYRYAAQKVDFLAQN 302 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + Q L+ +LD L ++L + ++ ++ + ++ NIQ +Q + Sbjct: 303 LKHPQQKLAEQAKQLDFLAQKLHTSSLHLLAKQQYRVAQQVQILQHRRP--NIQNKKQQL 360 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 Q +++ + + Sbjct: 361 DWMQAALQRAMFGLIESRRQ---------------------------------------- 380 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + +IL + + N L+RGY +Q + +L ++ I DG Sbjct: 381 -------QIDKQNQILNAMSPLNILQRGYAIVQTGRGQVVRDANDLRLGQKLAIRLADGA 433 Query: 494 ANAIVINKA 502 + V + Sbjct: 434 VDVQVAKQQ 442 >gi|170723358|ref|YP_001751046.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida W619] gi|169761361|gb|ACA74677.1| exodeoxyribonuclease VII, large subunit [Pseudomonas putida W619] Length = 463 Score = 348 bits (892), Expect = 2e-93, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 231/500 (46%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF ++ LD +VS+L+ + ++E V V GEIS +SGH YF+LKD+ Sbjct: 8 DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 66 AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 126 ALKEKLGAEGLFSAERKRPLPAHPQRIGIISSPTGAVIRDIISVFGRRAPQVELNLVPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I AI ++L D +ILARGGGS+EDLW FN+E + RAIA Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAIAACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L+ RL + + Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLQQRLEGLQRRLLLRMQNRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L SL + L + + L RLD L L + ++ + R+ + Sbjct: 299 AHDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFLQSLNQRRERLARLDTRLAAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ Q + + + + + + Sbjct: 359 HPGRTLKLLSQRLDSLAERLPRAM--------------------------------REVL 386 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K R + L LQ + TL RGY+ + D I Sbjct: 387 KDRRQRFQAQLQT---------------LQVVSPLATLARGYSILLDERGQAIRSAEQTR 431 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 432 NGQRLTARLNEGELQVRVED 451 >gi|288576179|ref|ZP_05978329.2| exodeoxyribonuclease VII, large subunit [Neisseria mucosa ATCC 25996] gi|288566114|gb|EFC87674.1| exodeoxyribonuclease VII, large subunit [Neisseria mucosa ATCC 25996] Length = 449 Score = 347 bits (890), Expect = 3e-93, Method: Composition-based stats. Identities = 135/507 (26%), Positives = 235/507 (46%), Gaps = 62/507 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S+ SVSEL+ K ++E +L+ + + GE+S +SGH YFSLKD+ Sbjct: 1 MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ +EG V GKI+ + ++QI + + G G L A Sbjct: 55 RAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYEARGEFQITVNEVRLKGLGQLYEAY 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L EG F+ + K P+P + I ++TS A +RD++ + R P + VI++P Sbjct: 115 ERLKAQLQAEGAFAAERKKPLPARAQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +IA AI + E D++I+ RGGGSIEDLW FN+E +VRAI Sbjct: 175 AVQGAGSEFQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ S +GHETD+TLAD+ AD+RAPTPTGAAE+ P ++ L + RL ++ + Sbjct: 229 AIPVASGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVLEQR 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L+ L + + + Q L R + +L + L +++ + F +K Sbjct: 289 YFDASQKLDWLARQIRHPRQKLDEQRTYIQKLAQTLSYSMTQNVRAHTARFERQTQALKH 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++ + I T Sbjct: 349 CRPDISVYRQ------------------------------------------DIDRFQTT 366 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + ++ + + T +L++ + + L+RG++ +++T I L Sbjct: 367 LSHAFRQLLAQRRQSLTAQ-------TALLEAVSPQQILERGFSVVKNTRGQVIRNANAL 419 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 ++ I F +G+ + V + +E Sbjct: 420 KQGQKLHIIFAEGETDVRVTKEQAQRE 446 >gi|85859628|ref|YP_461830.1| exodeoxyribonuclease VII large subunit [Syntrophus aciditrophicus SB] gi|85722719|gb|ABC77662.1| exodeoxyribonuclease VII large subunit [Syntrophus aciditrophicus SB] Length = 466 Score = 347 bits (890), Expect = 3e-93, Method: Composition-based stats. Identities = 158/501 (31%), Positives = 253/501 (50%), Gaps = 64/501 (12%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG-- 71 +VSEL+ ++ ++E+ + V GE+S R SSGH YF+LKD S+I A+I++ Sbjct: 20 ILTVSELNEKIRDLLEARFDLLWVEGEVSNLR-RPSSGHIYFTLKDEKSQIRAVIFRFLP 78 Query: 72 -----TLNKIEF-LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 N++ F EEG++ ++ + +YQ+I++SL P G+G L A E+ K Sbjct: 79 GSRPFRNNRLPFFDLEEGMQITCRARLAVYAPRGEYQLILDSLEPRGTGALQKAYEQLKA 138 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF K PIP++P+ I VITSPTGAVIRDIL + RFP + ++I PV+VQG Sbjct: 139 RLQAEGLFDASRKKPIPYLPRRIGVITSPTGAVIRDILNITARRFPSVSLVIAPVRVQGP 198 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E P+EI AI L++L+E D++ILARGGGS+EDL FNDE + RAIA+SS+P+I Sbjct: 199 EAPREIVQAIQDLHSLEE------VDVLILARGGGSLEDLSAFNDESVARAIASSSLPVI 252 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD+T+AD+AAD+RAPTP+ AAE+AVP + L + L +RL ++IR + + Sbjct: 253 SAVGHETDFTIADFAADVRAPTPSTAAELAVPNRNDLTAWLAGTRSRLYTLLIRSMTQRR 312 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L + + ++ R LD ++ + + ++ R++ + Sbjct: 313 EQLVRCRERLKDPQRVITGLRLALDDHRERGRLIIQQRLSAEKQNILLQRLRLQQAGPLR 372 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ R ++ + ++ + Sbjct: 373 RIRDTRLNVEDMEKRLISSC---------------------------------------- 392 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKT 483 R+ + S +++ + S + L+RGY+ + I L Sbjct: 393 -RLN------LDRARKSWTVSATRVDSLSPLAVLERGYSIARTLPGGRIIRDVAMLKIGD 445 Query: 484 RILINFFDGQANAIVINKAPP 504 + + G+ A V P Sbjct: 446 SLELRVRKGRLEAEVTRIIPE 466 >gi|332992295|gb|AEF02350.1| exonuclease VII, large subunit [Alteromonas sp. SN2] Length = 451 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 137/501 (27%), Positives = 231/501 (46%), Gaps = 58/501 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 F+ S +V++L+ + ++ES + + + EIS + +SGH YF+LKDN ++ Sbjct: 2 FTSSPSTSRQILTVTKLNRLARTVLESEVGLIWLSAEISNFVS-AASGHWYFTLKDNKAQ 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + A ++K T ++ P+EG + LV + + YQ++IE + G G L A E Sbjct: 61 VRAAMFKNTNRGVKQRPKEGDKVLVRASVGIYEARGDYQLVIEHMESDGEGALQQAYEAL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K KL EGLFS K P+P + I VITS TGA + D+L + R P VI++P VQ Sbjct: 121 KAKLNAEGLFSIDRKRPMPEVINRIGVITSSTGAALHDVLSVLKRRSPQTEVIVYPSMVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ P ++ NA+ N E D ++L RGGGS+EDLW FN+E + R IA S +P Sbjct: 181 GETAPNQLINALRTANQRNE------VDALLLTRGGGSLEDLWCFNNENLAREIAESQLP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +ISA+GHE D+T+AD+ ADLRAPTP+ AAE+ L SL+ + RL +++ + + Sbjct: 235 LISAVGHEVDFTIADFVADLRAPTPSAAAEILSQDTNALSESLVQYKQRLTRAMLQKLSH 294 Query: 303 KINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + LDRL L H + + + + F + NR+ Sbjct: 295 LAQQHKLQHQRLQSVHPQSKIQNQWQALDRLQLRLSHAINNKLAIENKRFESVDNRLARQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + + +++ + + +K Sbjct: 355 NPTVRVNQAKARMIQTHKALCNNMK----------------------------------- 379 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + S + + +LQS + +TL RGY+ ++ +T + Sbjct: 380 ------------QLVNSKQQAFAAKVGLLQSVSPLSTLSRGYSITM-SSGKAVTSVDTVK 426 Query: 481 TKTRILINFFDGQANAIVINK 501 ++ DG+ + ++ Sbjct: 427 ENDILMSRVTDGEITSKIVEI 447 >gi|313109192|ref|ZP_07795160.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa 39016] gi|310881662|gb|EFQ40256.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa 39016] Length = 462 Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 139/505 (27%), Positives = 224/505 (44%), Gaps = 60/505 (11%) Query: 1 MNPFSQKN----SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 M P LD +VS+L+ + ++E V V GE+S +SGH YF+ Sbjct: 1 MPPMRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFT 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 LKD++++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L Sbjct: 60 LKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGAL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A E K+KL EGLF+ + K P+P P+ I +++SP+GAVIRDI+ R P + + Sbjct: 120 RLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELT 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 + P VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA Sbjct: 180 LVPTAVQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARA 232 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +A + PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL Sbjct: 233 VAACTTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLR 292 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + + L + + L + + L RLD L L E + ++ + Sbjct: 293 MRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLET 352 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R+ + + RQ + + + ++ LR Sbjct: 353 RLAAQHPGRTLALLRQKLDSLAARLPRAAREALRDRR----------------------- 389 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 + + L + TL RGY+ + D I Sbjct: 390 ------------------------QRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRD 425 Query: 476 KRNLATKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 426 AGQTQPGQRLKARLAEGELEVRVED 450 >gi|171913357|ref|ZP_02928827.1| exodeoxyribonuclease VII, large subunit [Verrucomicrobium spinosum DSM 4136] Length = 445 Score = 347 bits (889), Expect = 4e-93, Method: Composition-based stats. Identities = 145/491 (29%), Positives = 236/491 (48%), Gaps = 53/491 (10%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SVS+L+ ++ ++E + V V GEIS +R SSGH YF+LKD ++I ++++G Sbjct: 2 SSVLSVSQLTRQIRSLLEGQIGDVSVEGEISNHRLQ-SSGHQYFTLKDEGAQISCVLFRG 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 +++ +G++ + G++T + YQII+ S+ P G G+L E K+KL EG Sbjct: 61 ASARMQTPLRDGMQVQLFGELTVYEQRGNYQIIVRSVQPKGQGSLQARFEALKQKLAGEG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF + K PIP P+++A++TSPTGA IRD+L ++ R P LRV++FPV+VQG +EI Sbjct: 121 LFENHWKKPIPKFPRVVALVTSPTGAAIRDMLNILTRRAPWLRVLVFPVRVQGQGAEQEI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI LN E PRPD I++ RGGGS+EDLW+FN+E++ RAI S+IP+ISA+GHE Sbjct: 181 ARAIDLLNQ--EVAGLPRPDTIVVGRGGGSLEDLWNFNEEVVARAIFASTIPVISAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLN 308 D+T+AD+ AD+RAPTP+ AAE+ P LQ +E + + + +++ L Sbjct: 239 IDFTIADFVADMRAPTPSAAAELLAPDTAELQRHFDAMEKSMTHRMRTTLEHHERVLELT 298 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ L + +D + E+ ++ + + Sbjct: 299 GKGALRREPERLLRDAVQSVDEVESSYHRAQELYWRSLDDRLVQHHRALEKYHPQRVLTE 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + QQH+ + Sbjct: 359 AAHRVALIQQHLGAFI-------------------------------------------- 374 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +I+ V ++L+S + L RG++ D I L T ++ Sbjct: 375 ---RQRIEQNAQKVMAMRKLLKSMGPDSVLSRGFSMTTDATGKVIEDASKLRTGDMMITR 431 Query: 489 FFDGQANAIVI 499 G+ ++V Sbjct: 432 LAKGKVASVVT 442 >gi|107103296|ref|ZP_01367214.1| hypothetical protein PaerPA_01004365 [Pseudomonas aeruginosa PACS2] Length = 462 Score = 347 bits (889), Expect = 4e-93, Method: Composition-based stats. Identities = 139/505 (27%), Positives = 224/505 (44%), Gaps = 60/505 (11%) Query: 1 MNPFSQKN----SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 M P LD +VS+L+ + ++E V V GE+S +SGH YF+ Sbjct: 1 MPPMRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFT 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 LKD++++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L Sbjct: 60 LKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGAL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A E K+KL EGLF+ + K P+P P+ I +++SP+GAVIRDI+ R P + + Sbjct: 120 RLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELT 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 + P VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA Sbjct: 180 LVPTAVQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARA 232 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +A + PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL Sbjct: 233 VAACATPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLR 292 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + + L + + L + + L RLD L L E + ++ + Sbjct: 293 MRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLET 352 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R+ + + RQ + + + + Sbjct: 353 RLAAQHPGRTLALLRQKLDSLAARLPRAAR------------------------------ 382 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 + L R + + L + TL RGY+ + D I Sbjct: 383 -----EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRD 425 Query: 476 KRNLATKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 426 AGQTQPGQRLKARLAEGELEVRVED 450 >gi|126653063|ref|ZP_01725198.1| exodeoxyribonuclease VII large subunit [Bacillus sp. B14905] gi|126590164|gb|EAZ84288.1| exodeoxyribonuclease VII large subunit [Bacillus sp. B14905] Length = 452 Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats. Identities = 142/502 (28%), Positives = 240/502 (47%), Gaps = 60/502 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +V L+ ++K + +L V V+GE+S + IH SGH YF+LKD+ +RI A Sbjct: 2 SSASYLTVKALTKYIKRKFDADPHLREVYVKGELSNVK-IHQSGHIYFTLKDDGARIAAT 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K+ F P+EG++ + G + + G YQ+ ++ + P G G+L A + K++L Sbjct: 61 MFKTAATKLAFEPKEGMQVFIRGDVNVYEGYGTYQLYVQEMQPDGIGSLFVAFNQLKEQL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + K IP P+ I V+TS TGA IRDI + R+PL ++I+P VQG + Sbjct: 121 QKEGLFKLEWKQSIPKFPEKIGVLTSTTGAAIRDICTTLKRRYPLAEILIYPTLVQGAQA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I + N ++I+ RGGGSIEDLW FN+E++ RAI +S IPIISA Sbjct: 181 APNIVQNIQRANQ------EATCQVLIVGRGGGSIEDLWAFNEEIVARAIFDSRIPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+ADY +DLRAPTPT AAEMAVP + L +++ +++++ ++ + + Sbjct: 235 VGHETDTTIADYVSDLRAPTPTAAAEMAVPDQAELFQRVLSQKSQIHQMVRSQLMAERQR 294 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN L + L ++ RL + L+ +++ + +K + + + Sbjct: 295 LNKLQQSYPLSMPERLYRPFTERLAQFESGLQTAMQVDLMKKSAQLQQLHSTVAQHSPKK 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +++ + + Q + + + Sbjct: 355 ALAFHQRELEARMQQLTRATTYY------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + T R L++ + L RG+T + I ++ + Sbjct: 378 ----------VAKQQQQFEATIRTLEALNPLSILTRGFTVAY-KDQQMIKSSTDVQKQDH 426 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + + F DG+ A V + P E Sbjct: 427 LTLTFHDGKVVAEVKDILPKNE 448 >gi|329924767|ref|ZP_08279756.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. HGF5] gi|328940432|gb|EGG36755.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. HGF5] Length = 456 Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats. Identities = 146/491 (29%), Positives = 234/491 (47%), Gaps = 60/491 (12%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SV +L+ +++ +E + LS V +RGEIS + HSSGH YF+LKD SRI AI++ Sbjct: 9 VLSVKDLNRYIRMKMEGDSRLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRAIMFAT 67 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F+P+EG + G ++ + +YQ + P G G+L A E+ K KL EEG Sbjct: 68 HNQRLPFIPKEGSRVIARGNVSVYERDGQYQFYAVQMQPDGIGSLYLAYEQLKSKLEEEG 127 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K P+P PK I VITSPTGA +RDI+ I R+P I++PV VQG I Sbjct: 128 LFAADRKRPLPRYPKTIGVITSPTGAAVRDIMITIRRRYPQANTILYPVLVQGKGAAPSI 187 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +N + E D++I+ RGGGS+E+LW FN+E++ RAI S IP++SA+GHE Sbjct: 188 VKAIRTMNDMAEA------DVLIVGRGGGSLEELWAFNEEIVARAIYQSHIPVVSAVGHE 241 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ ADLRA TPT AAE+AVP L+ L + +LN + + ++ L SL Sbjct: 242 TDFTIADFVADLRAATPTAAAELAVPSSAELRGQLAQRQRQLNQGLQQRLQRSRERLISL 301 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + + + RLD L + L+ +L+ + + + + + Sbjct: 302 QRSPVLVHPRRYMLQHAERLDMLSQRLQGHLKSRLSLVRQRQKSLHQGLIRYNPRTQAEF 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + ++ ++ Sbjct: 362 AAKRKEQANRQLMNAMQSIMKSKM------------------------------------ 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487 + + R L + + + RGY+ + D + ++ + + Sbjct: 386 -----------SQLQTEMRHLDALSPLKIMSRGYSLVYDEKEQKLVKSIEDVQLGDLVNV 434 Query: 488 NFFDGQANAIV 498 DGQ V Sbjct: 435 RVNDGQLQCQV 445 >gi|261405953|ref|YP_003242194.1| exodeoxyribonuclease VII large subunit [Paenibacillus sp. Y412MC10] gi|261282416|gb|ACX64387.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. Y412MC10] Length = 456 Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats. Identities = 148/491 (30%), Positives = 235/491 (47%), Gaps = 60/491 (12%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SV +L+ +++ +E + LS V +RGEIS + HSSGH YF+LKD SRI AI++ Sbjct: 9 VLSVKDLNRYIRMKMEGDSRLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRAIMFAT 67 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F+P+EG + G ++ + +YQ + P G G+L A E+ K KL EEG Sbjct: 68 HNQRLPFIPKEGSRVIARGNVSVYERDGQYQFYAVQMQPDGIGSLYLAYEQLKSKLEEEG 127 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K P+P PK I VITSPTGA +RDI+ I R+P I++PV VQG I Sbjct: 128 LFAADRKRPLPRYPKTIGVITSPTGAAVRDIMITIRRRYPQANAILYPVLVQGKGAAPSI 187 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +N + E D++I+ RGGGS+E+LW FN+E++ RAI S IPI+SA+GHE Sbjct: 188 VKAIRTMNDMAEA------DVLIVGRGGGSLEELWAFNEEIVARAIYQSHIPIVSAVGHE 241 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ ADLRA TPT AAE+AVP L+ L + +LN + + ++ L SL Sbjct: 242 TDFTIADFVADLRAATPTAAAELAVPSSAELRGQLAQRQRQLNQGLQQRLQRSRERLISL 301 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + + + RLD L + L+ +L+ + +H + + + Sbjct: 302 QRSPVLVHPRRYMLQHAERLDMLSQRLQGHLKSRLSLVRQHQKSLHQGLIRYNPRTQAEF 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + ++ ++ Sbjct: 362 AAKRKEQANRQLMNAMQSIMKSKM------------------------------------ 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487 + + R L + + + RGY+ + D + ++ + + Sbjct: 386 -----------SQLQTEMRHLDALSPLKIMSRGYSLVYDEKEQKLVKSIEDVQLGDLVNV 434 Query: 488 NFFDGQANAIV 498 DGQ V Sbjct: 435 RVNDGQLQCQV 445 >gi|94269423|ref|ZP_01291459.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1] gi|93451227|gb|EAT02130.1| Exodeoxyribonuclease VII [delta proteobacterium MLMS-1] Length = 445 Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats. Identities = 146/497 (29%), Positives = 241/497 (48%), Gaps = 55/497 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 +N D+ +VSEL+ ++ ++E++ + V V GEIS R +SGH YF+LKD H+ Sbjct: 2 EADMENPFDNRIQTVSELTRSIRGLLETSYNMVTVSGEISNLR-RPASGHLYFTLKDAHA 60 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ +++KG + P +G+E L G+++ + +YQ+I++ + G+G L A ++ Sbjct: 61 QLRGVLFKGQQRYLACNPADGLEVLCRGRLSVYEPRGEYQLIVDFMDGKGAGLLRVAFDR 120 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKV 181 K KL EGLF K P+PF+P+ IA++TSP GA +RD L + P + I PV+V Sbjct: 121 LKAKLEAEGLFEPARKKPLPFLPRRIALVTSPQGAAVRDFLTQAGKLCPFTAIEIMPVRV 180 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD EIA+AI QLN + +II+L RGGGS+EDLW FN+E + RAIA S I Sbjct: 181 QGDGAAAEIADAIHQLNERQ------SSEIIVLCRGGGSLEDLWAFNEEAVARAIAASQI 234 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SA+GHE D+T+AD ADLRAPTPT AA + +P E L + L RL + R + Sbjct: 235 PVVSAVGHEVDYTIADLVADLRAPTPTAAARLILPDGEQLLAQARELSHRLAAAMRRHLL 294 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L + + L + + L+ RLD L +L L+ + + + + ++ Sbjct: 295 EARRRLEAEQRLLRDPARGLAQHAIRLDYLRADLARALQGRLRHRRQRLLAWEHALQRLD 354 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + +R + E Q + Sbjct: 355 PRRRLTAHRAMLQENQLRL----------------------------------------S 374 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L+ ++ +++ IL++ + L RGY + + + + A Sbjct: 375 FLMRQLLSGRRNQLSR-------AAAILEAVSPLAVLGRGYAIARRPDGTILRSVKEAAP 427 Query: 482 KTRILINFFDGQANAIV 498 + + DG + ++ Sbjct: 428 GAPLRLTLHDGDLHCVI 444 >gi|87198197|ref|YP_495454.1| exodeoxyribonuclease VII large subunit [Novosphingobium aromaticivorans DSM 12444] gi|87133878|gb|ABD24620.1| Exodeoxyribonuclease VII large subunit [Novosphingobium aromaticivorans DSM 12444] Length = 453 Score = 346 bits (887), Expect = 6e-93, Method: Composition-based stats. Identities = 177/505 (35%), Positives = 260/505 (51%), Gaps = 53/505 (10%) Query: 25 KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGI 84 K VE V VRGE+SG + +SGH Y LKD ++R+D ++W+G ++ F PE+G+ Sbjct: 2 KRTVEDRFGFVRVRGELSGVK-RAASGHLYLCLKDENARLDGVMWRGNAQRLNFRPEDGV 60 Query: 85 EFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144 E + GK+TT+PG S YQI+I+ + +G G LL L K K +L EGLF K +PF+ Sbjct: 61 EVIATGKLTTYPGRSNYQIVIDRMEIAGEGALLALLAKLKARLEGEGLFDPARKKALPFL 120 Query: 145 PKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGR 204 P+ I V+TSPTGAVIRDIL R+S RFP RVI++PV VQG ++ANA+ + ++ G Sbjct: 121 PRTIGVVTSPTGAVIRDILHRLSDRFPCRVIVWPVLVQGQGAAAQVANAVRGFSAMEPGG 180 Query: 205 TCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRA 264 PRPD++I+ARGGGSIEDLW FN+E +VRA+A+ +IPIISA+GHETD TL D+AADLRA Sbjct: 181 PIPRPDLVIVARGGGSIEDLWSFNEEEVVRAVADCTIPIISAVGHETDTTLCDFAADLRA 240 Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 PTPT AAE+AVPV+ L + + +L AR + R + L + + LP L Sbjct: 241 PTPTAAAELAVPVQAELAAFVADLNARQRRALGRQLGQARERLEARSQRLPQPHALLQGQ 300 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R+D L L L ++ L + + R+ + ++ E ++ Sbjct: 301 AQRVDDLGDRLRLALLHRTEIAASQLARHAGALRPALLSARVDRERERLAARRLRPEALL 360 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 RI + + Sbjct: 361 --------------------------QRIDHARGKVD----------------------A 372 Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 R+ +S + L+RGY + D++ + + + AT+ + + F DG + V APP Sbjct: 373 LDRLRRSLNPEAPLERGYVLVTDSDGHLVKDRATAATRAALTLKFADGTLD--VSTGAPP 430 Query: 505 KEQPTKKCQLHNNKREKQGTQGELF 529 + + + Q ELF Sbjct: 431 PAGS--RSASKPRQAARPEGQQELF 453 >gi|330894504|gb|EGH27165.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. mori str. 301020] Length = 456 Score = 346 bits (887), Expect = 6e-93, Method: Composition-based stats. Identities = 135/500 (27%), Positives = 234/500 (46%), Gaps = 60/500 (12%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 4 DPFA-RLGLDREVLTVSQLNGRARVVLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + + ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 62 AQVRCALFRQSAAHVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAV I+ R P + + + P Sbjct: 122 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAV---IISVFRRRAPRVELTLIPTA 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 179 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 231 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + +L RL + + + Sbjct: 232 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDSLHRRLVSRMQDRL 291 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ H+ +R+ + Sbjct: 292 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAAQ 351 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + +++ ++ L+ + Sbjct: 352 HPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQ------------------------ 387 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L + TL RGY+ + D + I Sbjct: 388 -----------------------SQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTR 424 Query: 481 TKTRILINFFDGQANAIVIN 500 T R+ +G+ V + Sbjct: 425 TGQRLTARLGEGELQVRVED 444 >gi|167464894|ref|ZP_02329983.1| exodeoxyribonuclease VII large subunit [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382775|ref|ZP_08056619.1| exodeoxyribonuclease VII large subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153244|gb|EFX45690.1| exodeoxyribonuclease VII large subunit-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 455 Score = 346 bits (887), Expect = 7e-93, Method: Composition-based stats. Identities = 153/495 (30%), Positives = 235/495 (47%), Gaps = 61/495 (12%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + SV EL+ ++K +ES+ L V VRGEIS + HSSGH YF+LKD SR+ +I+ Sbjct: 5 ERKILSVKELNRYMKMKLESDSVLQDVWVRGEISNFTH-HSSGHMYFTLKDKDSRLKSIM 63 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + ++ F P+EG L G I+ + +YQ ++ + P G G L A E+ KKKL Sbjct: 64 FASQNQRLSFRPKEGTMVLARGNISVYERDGQYQFYVQQMQPDGMGNLYLAFEQLKKKLE 123 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ + K PIP PK I V+TSPTGA +RDI+ + RFP + V ++PV VQG + Sbjct: 124 SEGLFALERKKPIPKYPKAIGVVTSPTGAAVRDIIITLQRRFPSVPVYLYPVLVQGAQAA 183 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI +N E D++I+ RGGGS+E+LW FN+E++ R+I S+IP+ISA+ Sbjct: 184 PSITKAIDAMNRDGE------VDVLIVGRGGGSLEELWAFNEELVARSIFASAIPVISAV 237 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+ ADLRA TPT AAE+AVP K LQ L RL+ +++ ++ + L Sbjct: 238 GHETDFTIADFVADLRAATPTAAAELAVPHKLELQQQLDQYRQRLHQGLLKRLERGRDRL 297 Query: 308 NSLLK--ALPNSDQTL-SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + + + L RLDR+ +L ++ + + R+ + Sbjct: 298 ERLRRSPFFVHPRRQLTQQPLERLDRVREQLAFRMQKKLSAAGDCHLRLEKRLSAFNPKE 357 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + R+ Sbjct: 358 QVVYARR-----------------------------------------------CSDAAG 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKT 483 + + KS + R L + + ++RGY+ + D I + Sbjct: 371 RALILAIQGIYKSNRRELGAVMRQLDALSPLKVMQRGYSLVYDEQEKQLIKSLDQVQIGD 430 Query: 484 RILINFFDGQANAIV 498 + I DG+ + Sbjct: 431 VVKIKLTDGRLGCHI 445 >gi|296387710|ref|ZP_06877185.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa PAb1] Length = 459 Score = 345 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 140/500 (28%), Positives = 227/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ LD +VS+L+ + ++E V V GE+S +SGH YF+LKD++ Sbjct: 4 DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L A E Sbjct: 62 AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLF+ + K P+P P+ I +++SP+GAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+A + Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACT 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ + R+ + Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + ++ LR Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAREALRDR----------------------------- 385 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + L + TL RGY+ + D I Sbjct: 386 ------------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLKARLAEGELEVRVED 447 >gi|221133877|ref|ZP_03560182.1| exodeoxyribonuclease VII, large subunit [Glaciecola sp. HTCC2999] Length = 450 Score = 345 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 139/505 (27%), Positives = 226/505 (44%), Gaps = 58/505 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S SV++L+ + ++++++ V + EIS + +SGH YF+LKD ++ Sbjct: 1 MYTSTSTQRNILSVAKLNKMVGSLLKTHVGQVWISAEISNFVA-AASGHWYFTLKDRDAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + A ++KG +I P+EG LV + + YQII+E L G+G L E+ Sbjct: 60 VKAAMFKGANGRIAQRPKEGDSVLVRANVGLYEPRGDYQIIVEHLEFDGAGLLKQQYEQL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K L EGLF+ Q K IP K + +ITS TGA + DI + R P + VI++P +VQ Sbjct: 120 KNALQAEGLFATQTKQAIPQDIKTVGIITSATGAALHDITTVLKRRNPMINVIVYPTQVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G +I NAI N +E D++I+ RGGGS+EDLW FN+E + RAI S +P Sbjct: 180 GAAAAAQIVNAIFIANRRRE------VDVLIVGRGGGSLEDLWCFNEETVARAIFGSHLP 233 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D T+AD+ ADLRA TP+ AAE+ + ++ RL I + Sbjct: 234 IVSAVGHEVDVTIADFVADLRAATPSQAAELVSSDLGDVIYTIEQWRQRLTQAISTKLNE 293 Query: 303 K--INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L + Q L +D +L+HN++ + + H+ NR++ Sbjct: 294 CDYQQQLLGSRLQQNHPQQRLQQQAQAIDHFTMQLQHNMQRRLQVAQQRQQHLENRLQHL 353 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 IH + +++QH + + Q Sbjct: 354 SPIHLVSQSQQHTHTLTERLRQA------------------------------------- 376 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 +++++ + T IL S + TL RGY+ +N+ + + Sbjct: 377 ----------MANRLTHQQQRFAKVTGILHSVSPLATLSRGYSISF-VDNHVVNTTSTIK 425 Query: 481 TKTRILINFFDGQANAIVINKAPPK 505 + DG+ + V + K Sbjct: 426 EGDTLTTRLTDGEVTSKVERISAVK 450 >gi|221310353|ref|ZP_03592200.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. subtilis str. 168] gi|221319600|ref|ZP_03600894.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. subtilis str. JH642] gi|221323876|ref|ZP_03605170.1| exodeoxyribonuclease VII large subunit [Bacillus subtilis subsp. subtilis str. SMY] Length = 448 Score = 345 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 139/496 (28%), Positives = 238/496 (47%), Gaps = 60/496 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L ++ ++GE+S + IH+ GH YF+LK+ R+ ++++ Sbjct: 8 TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKERKGRMQSVMFARQS 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D++K IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I E D++I+ RGGGSIE+LW FN+E++ RAI S+IPIISA+GHETD Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E R+ + + + K + +L Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQKKERIQTLQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D ++ + L ++ RK R R+++ +++ R Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 E+ + + + ++ + Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + + ++RGY+ + I + + R+ I Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEIKLK 432 Query: 491 DGQANAIVINKAPPKE 506 DG V+ K ++ Sbjct: 433 DGVLTCEVLEKRGEEK 448 >gi|224369659|ref|YP_002603823.1| XseA [Desulfobacterium autotrophicum HRM2] gi|223692376|gb|ACN15659.1| XseA [Desulfobacterium autotrophicum HRM2] Length = 452 Score = 345 bits (886), Expect = 7e-93, Method: Composition-based stats. Identities = 147/503 (29%), Positives = 245/503 (48%), Gaps = 56/503 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + ++VS+L+ +K ++E + V + GEIS + +SGHAYFSLKD+++ I Sbjct: 2 AQANNFRQIFTVSKLTREIKTLIEERFTLVWITGEISNL-SLPASGHAYFSLKDSNAVIS 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +I++ L ++ F PE G++ + +G+++ + YQ+I E + PSG+G L A E+ K Sbjct: 61 GVIFRNQLRRLGFKPENGMKIIGMGRLSLYEPRGSYQLIFEHMEPSGTGALQAAFEQLKH 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184 KL EGLF + K +PF+P+ I+++TSPTGAVI+DI+ RF + + I PVKVQG+ Sbjct: 121 KLALEGLFDEDRKQRLPFLPERISIVTSPTGAVIQDIINVSKRRFSNIPLEIVPVKVQGE 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 EIA AI +N D+II+ARGGGS+EDL FN E + RA+ S+IPII Sbjct: 181 GADLEIAKAIALINQRAVS------DLIIVARGGGSLEDLVAFNSETVARAVFESAIPII 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD+T+ D+AAD+RAPTP+ AAE+A+P K L S L +L A L I++ Sbjct: 235 SAVGHETDFTITDFAADVRAPTPSAAAELALPEKSALFSRLTDLRAFLVRTIVQRQALIR 294 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L + + + R++L+ L + +E + + + ++ Sbjct: 295 ERIMELTARLKDPKRAVDDLRFKLEDLESRMTGLIEKRTAACRERLDWFTHALFANSPER 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++K R++I + + + + K+L Sbjct: 355 QVKKERENINTRVTQLVAAITTT-------------------------LEGRRGRTKELT 389 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKT 483 R L++ + L RGY+ + + + Sbjct: 390 AR----------------------LEALSPMGVLDRGYSITRTLPEKTVLMDSTGIEIDK 427 Query: 484 RILINFFDGQANAIVINKAPPKE 506 + + G+ V ++ Sbjct: 428 TVEVILARGRLYCQVKKINGKEK 450 >gi|311069031|ref|YP_003973954.1| exodeoxyribonuclease VII large subunit [Bacillus atrophaeus 1942] gi|310869548|gb|ADP33023.1| exodeoxyribonuclease VII large subunit [Bacillus atrophaeus 1942] Length = 448 Score = 345 bits (886), Expect = 8e-93, Method: Composition-based stats. Identities = 135/496 (27%), Positives = 239/496 (48%), Gaps = 60/496 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L + ++GE+S + IH+ GH YF+LKD ++R+ ++++ Sbjct: 8 TVSALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHTRGHIYFTLKDENARMQSVMFARQS 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 ARLPFKPESGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLANEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 ++HK IP P I V+TSPTGA +RD++ + R+P +++I+ P VQG+ + I Sbjct: 127 DERHKKTIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKIIVLPALVQGENASRSIVK 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + N + D++I+ RGGGSIE+LW FN+E++ R+I +S IPIISA+GHETD Sbjct: 187 RIEEANEKQM------CDVLIVGRGGGSIEELWAFNEEIVARSIFSSRIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L + E R+ + + I K + +L Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERIKTAEVRITRAMQQHISQKKERIQTLQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D ++ + L + RK R R+ + +++ R Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQTQLTSLFERKNRQLERETYRLAALHPHEQLKQAR 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + ++ + + + ++ + Sbjct: 361 KRHEDRTNQLTRSMNIQIKQL--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + + ++RGY+ + I + ++ + Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-ELIKSISQVEENDQLEVKLK 432 Query: 491 DGQANAIVINKAPPKE 506 DG V+ + + Sbjct: 433 DGVLTCEVLERRGEAK 448 >gi|307544211|ref|YP_003896690.1| exodeoxyribonuclease VII large subunit [Halomonas elongata DSM 2581] gi|307216235|emb|CBV41505.1| exodeoxyribonuclease VII large subunit [Halomonas elongata DSM 2581] Length = 453 Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats. Identities = 136/503 (27%), Positives = 230/503 (45%), Gaps = 55/503 (10%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S SV L+ + + ++ES + + V E+SG +SGH YF+LKD H+++ Sbjct: 2 SSTAEQPLSVEALNRNARQLLESGIGEIWVEAELSGV-SRPASGHVYFTLKDEHAQLRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + +G V G+++ F +Q+I E++ P+G G LL A E+ K KL Sbjct: 61 LFRTRARFVTAPMRDGDRVKVRGRVSLFEPRGNFQLIAEAVQPAGEGELLAAFERLKAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EG+F++ +PF P+ + V+TSPTGA IRD+L ++ R+PL +V + PV VQG E Sbjct: 121 DAEGVFANARP--LPFPPRHLLVLTSPTGAAIRDVLAVLAARWPLSQVTLIPVPVQGREA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ LN P D I++ RGGGS+EDLW FNDE + RAI +S +P++SA Sbjct: 179 APALIAALGLLNRQSILD--PERDAILITRGGGSLEDLWAFNDEHLARAIFHSRLPVMSA 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D TLAD+AAD RAPTP+ AAE VP Sbjct: 237 VGHEVDVTLADFAADSRAPTPSAAAERLVPDA---------------------------- 268 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + R RL +L L + + + + +H+ R++ + Sbjct: 269 ---------------AALRQRLVQLEERLIRSQRARLDTQGQRLDHLRARLR--HPGEVL 311 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 R+ + + + + + + L ++ L + ++ + R Sbjct: 312 AYRRRQLEQLEGRLHRAMNAGLAERRERERHLRQRLT--LRSPQRQVEQAEQRLTLAARR 369 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ + + ++ +R LQ+ + L RGY ++ I + + R+ Sbjct: 370 LQQSMPRALARHRERLAAVSRELQAVSPLAILGRGYAILESPEGRVIKRTGDTRPGERLE 429 Query: 487 INFFDGQANAIVINKAPPKEQPT 509 +GQ V+ P E P Sbjct: 430 ARLGEGQLTLEVL--PPSSESPA 450 >gi|288553329|ref|YP_003425264.1| exodeoxyribonuclease VII large subunit [Bacillus pseudofirmus OF4] gi|288544489|gb|ADC48372.1| exodeoxyribonuclease VII large subunit [Bacillus pseudofirmus OF4] Length = 450 Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats. Identities = 153/495 (30%), Positives = 241/495 (48%), Gaps = 60/495 (12%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+L+ ++K I+E + L+ V +RGEIS ++ +HS GH YF++KD +SRI A+++ G Sbjct: 8 SVSQLTRYIKGIMEHDHILTDVWIRGEISNFK-LHSRGHMYFTIKDQNSRIQAVMFAGHN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ L+ G++ + +YQ+ + + P G G+L A EK K+ L EEGLF Sbjct: 67 RYLAFKPENGMKVLIRGEVNVYEPYGQYQLYAKEMQPDGVGSLFLAYEKLKETLQEEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + K PIP PK IA++TSPTGA I+D+L + R+PL ++ + PV VQG E P I Sbjct: 127 DESRKRPIPRFPKKIAIVTSPTGAAIKDMLATLKRRYPLAQITLLPVLVQGQEAPASIVR 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ Q N + D +I+ RGGGSIE+LW FNDE + R I S++P+ISA+GHETD Sbjct: 187 AVNQANAA------NQFDTLIVGRGGGSIEELWAFNDEGVARCIVASTVPVISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ ADLRAPTPTGAAE+AVP L S L RL + I+ L L + Sbjct: 241 FTISDFVADLRAPTPTGAAELAVPDVAELLHSRQVLHNRLKRQMKLKIEEHQEQLKRLKR 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + Q + LD L+ + + K + F I ++ I+ + Sbjct: 301 SYAFRYPLQLIRQKEQELDTQLERLQRASKRHMSDKQQQFQLIEKALQRLHPKGQIKDAQ 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + +K+ +E+ + H+ + R Sbjct: 361 SGLKDKKLRLEKSMT--------------------------------QHLSRHEQR---- 384 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINF 489 + L + ++RGY+ + + + ++ + Sbjct: 385 -----------FNHVVSELNLLSPLRIMERGYSLAYTEGKEELVKSIQQVDAGQKVEVRV 433 Query: 490 FDGQANAIVINKAPP 504 DG V +K Sbjct: 434 TDGVIYCQVEDKQSK 448 >gi|1303917|dbj|BAA12573.1| YqiB [Bacillus subtilis] Length = 448 Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats. Identities = 138/496 (27%), Positives = 238/496 (47%), Gaps = 60/496 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K V+ +L ++ ++GE+S + IH+ GH YF+LK+ R+ ++++ Sbjct: 8 TVSALTKYIKRKFDVDPHLENIWIKGELSNVK-IHTRGHIYFTLKERKGRMQSVMFARQS 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G++ LV G I+ + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 ERLPFKPENGMKVLVRGGISVYEPSGNYQLYAKEMQPDGVGALYLAYEELKKKLAGEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 D++K IP P I V+TSPTGA +RD++ + R+P ++VI+ P VQG+ + I Sbjct: 127 DDRYKKQIPAFPATIGVVTSPTGAAVRDVITTLKRRYPLVKVIVLPALVQGENASRSIVT 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I E D++I+ RGGGSIE+LW FN+E++ RAI S+IPIISA+GHETD Sbjct: 187 RIE------EANEKEICDVLIVGRGGGSIEELWAFNEEIVARAIFASNIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RA TPTGAAE+AVP L E R+ + + + + + +L Sbjct: 241 FTISDFVADIRAATPTGAAEIAVPHTTDLIERTKTAEVRMTRAMQQHLGQEKGRIQTLQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D ++ + L ++ RK R R+++ +++ R Sbjct: 301 SYAFRFPKRLYAQKEQQFDLAYQQFQAQLTALLDRKSRQLERETYRLEALHPHEQLKQAR 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 E+ + + + ++ + Sbjct: 361 TRYQEQTNQLRKNMNIQMKQL--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + + ++RGY+ + I + + R+ I Sbjct: 382 --------HSQFQTVLGKLNALSPLQVMERGYSLAYKED-KLIKSVSQIEEQDRLEIKLK 432 Query: 491 DGQANAIVINKAPPKE 506 DG V+ K ++ Sbjct: 433 DGVLTCEVLEKRGEEK 448 >gi|34499019|ref|NP_903234.1| exodeoxyribonuclease VII large subunit [Chromobacterium violaceum ATCC 12472] gi|34104869|gb|AAQ61226.1| exodeoxyribonuclease, VII large subunit [Chromobacterium violaceum ATCC 12472] Length = 454 Score = 344 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 134/492 (27%), Positives = 232/492 (47%), Gaps = 57/492 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 SVS L+ + ++E+ + V + GEIS + +SGHAYFSLKD ++I + Sbjct: 7 PDQSQDVISVSSLNRMARDLLEAGIPPVWIGGEISNLT-LAASGHAYFSLKDGGAQIRCV 65 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ L+ + F P+EG++ + G++T + ++QI + + +G G L A E+ K +L Sbjct: 66 MFRHKLSLLPFRPQEGMQVELRGQVTLYEARGEFQINVGEMRAAGLGRLYEAFERLKARL 125 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF + K +P P I ++TSP A +RD++ + R P + +I++P +VQG+ Sbjct: 126 QAEGLFDNARKRELPAHPAAIGIVTSPAAAALRDVVSTLRRRMPGIPLILYPTQVQGEGS 185 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++IA+A+ D++I+ RGGGSIEDLW FN+E++ RA+A S IP +S Sbjct: 186 ARQIADALRL------AGERREVDVLIVCRGGGSIEDLWSFNEEIVARAVAASPIPTVSG 239 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ AD RAPTPT AAE+ P +EHL L + L + RL+ K Sbjct: 240 VGHETDFTICDFVADRRAPTPTAAAELVSPNREHLAIQLEQTKRALERALSRLLTDKTQQ 299 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ L + L + L R RLD L L ++ + R+ ++ Sbjct: 300 LDFLGRRLTHPGARLQVQRERLDALSSALGQRVQAAFEQGRWRLQLAGTRLSRHQP--DL 357 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +Q + ++Q + + R Sbjct: 358 DVGKQALRQRQAALLRA----------------------------------------RDR 377 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ +++ + L RGY +Q + + LA + ++ Sbjct: 378 LLERRAQQLAQLAATLTA-------LNPEAVLARGYAIVQKQDGRAVKNPAELADREKVT 430 Query: 487 INFFDGQANAIV 498 + +G A A + Sbjct: 431 LRLAEGSAEARI 442 >gi|217327167|ref|ZP_03443250.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. TW14588] gi|217319534|gb|EEC27959.1| exodeoxyribonuclease VII, large subunit [Escherichia coli O157:H7 str. TW14588] Length = 430 Score = 344 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 140/482 (29%), Positives = 221/482 (45%), Gaps = 57/482 (11%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 + V + GEIS + +SGH YF+LKD+ +++ +++ + ++ F P+ G + LV Sbjct: 1 MGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRAN 59 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 IT + YQII+ES+ P+G G L E+ K KL EGLF Q+K P+P + VI Sbjct: 60 ITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAKLQAEGLFDLQYKKPLPSPAHCVGVI 119 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 TS TGA + DIL + R P L VII+P VQGD+ P +I AI N C D Sbjct: 120 TSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQ------CNECD 173 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 ++I+ RGGGS+EDLW FNDE + RAI S IP++SA+GHETD T+AD+ ADLRAPTP+ A Sbjct: 174 VLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAA 233 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-- 328 AE+ ++ L + + RL + + + + L L +R + Sbjct: 234 AEVVSRNQQELLRQVQSTRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTML 293 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 +RL + + LE + R + + R+ I + + I + + + + Sbjct: 294 ERLQKRMSFALENQLKRAGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAE------ 347 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 L ++ + Sbjct: 348 -----------------------------------------TLRAQLSATRERFGNAVTH 366 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 L++ + +TL RGY+ T+ + + + + + DG + V N P K+ Sbjct: 367 LEAVSPLSTLARGYSVTTATDGKVLKKVKQVKAGEMLTTRLEDGWVESEVKNIQPVKKSR 426 Query: 509 TK 510 K Sbjct: 427 KK 428 >gi|315646329|ref|ZP_07899449.1| exodeoxyribonuclease VII, large subunit [Paenibacillus vortex V453] gi|315278528|gb|EFU41844.1| exodeoxyribonuclease VII, large subunit [Paenibacillus vortex V453] Length = 461 Score = 344 bits (883), Expect = 2e-92, Method: Composition-based stats. Identities = 151/491 (30%), Positives = 235/491 (47%), Gaps = 60/491 (12%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SV +L+ +++ +E + LS V +RGEIS + HSSGH YF+LKD SRI AI++ Sbjct: 14 VLSVKDLNRYIRMKMEGDSRLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRAIMFAT 72 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F+P+EG + G ++ + +YQ + P G G+L A E+ K KL EEG Sbjct: 73 HNQRLPFIPKEGSRVIARGNVSVYERDGQYQFYAVQMQPDGIGSLYLAYEQLKAKLEEEG 132 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ K P+P PK I VITSPTGA +RDI+ I R+P R I++PV VQG I Sbjct: 133 LFAADRKRPLPLYPKTIGVITSPTGAAVRDIMITIRRRYPQARTILYPVLVQGKGAVPSI 192 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +N + E D++I+ RGGGS+E+LW FN+E++ R I S IP+ISA+GHE Sbjct: 193 VKAIRTMNDMAEA------DVLIVGRGGGSLEELWAFNEEIVARVIYQSDIPVISAVGHE 246 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ ADLRA TPT AAE+AVP L+ L+ + +LN + + +K L SL Sbjct: 247 TDFTIADFVADLRAATPTAAAELAVPSSAELKGQLVQRQRQLNQGLQQRLKRSRERLASL 306 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + + + RLD L + L NL+ + + + + + Sbjct: 307 QRSPVLVHPRRYMLQHAERLDMLSQRLHGNLKSQLSLSRQRQKSLHQGLIRYNPRTQAEF 366 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + ++ Sbjct: 367 AARRKDQANRQLMNAMQ------------------------------------------- 383 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487 I+ ++ T R L + + + RGY+ + D + ++ + + Sbjct: 384 SIMKSRLSQLQTE----MRHLDALSPLKIMSRGYSLVYDEKEQRLVKSLEDVQLGDLVNV 439 Query: 488 NFFDGQANAIV 498 DGQ V Sbjct: 440 RVSDGQLQCQV 450 >gi|293376578|ref|ZP_06622806.1| exodeoxyribonuclease VII, large subunit [Turicibacter sanguinis PC909] gi|292644804|gb|EFF62886.1| exodeoxyribonuclease VII, large subunit [Turicibacter sanguinis PC909] Length = 447 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 149/495 (30%), Positives = 235/495 (47%), Gaps = 59/495 (11%) Query: 14 EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +V L+ ++K + NL H+ ++GEIS ++ HS GH YF+LKD+ ++I+A+++ Sbjct: 6 PLTVKALTKYIKLKFDYDKNLQHLLLKGEISNFK-RHSRGHFYFTLKDDEAQINAVMFAS 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 +++ F+P+EG++ +V G I + Y + ++ + G G L A + K++L EG Sbjct: 65 AASQVSFMPKEGMQVVVKGHIAVYEAGGSYSLYVKEMTEDGIGNLYVAFTQMKERLGAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF + K PIP P I VITSPTGA IRD+L I RFP ++V ++P VQG++ I Sbjct: 125 LFDARFKQPIPPFPHAIGVITSPTGAAIRDVLSTIKRRFPLVKVYVYPALVQGEQAAPSI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I Q N LK+ D +I+ RGGGSIEDLW FN+E++ RAI S IPIISA+GHE Sbjct: 185 VKCIQQANELKQ------VDTLIVGRGGGSIEDLWAFNEEIVARAIFESKIPIISAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ AD RAPTPTGAAE+AVP + L L RLN+ + K L+ L Sbjct: 239 TDFTIADFVADHRAPTPTGAAEIAVPNVVDVLKHLNQLNVRLNHNFNVQFEQKKQWLSQL 298 Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N + +L +L++ L+ + ++ + NR+ + Sbjct: 299 SNHYIMKNPHALFEQRLVYVSQLNDKLQYQLQQQLRKRQQILMMHSNRLIQHNPKQRVMN 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + ++ + Q L Sbjct: 359 YQHQLEYLSKALQSGMNQELANQKQHY--------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + L + LK+GYT + N +T ++ ++ + Sbjct: 386 --------------GLLLTKLDMLNPMSILKKGYTVTTNEKNEMVTSVSQVSVGQKVTVA 431 Query: 489 FFDGQANAIVINKAP 503 F DG A V Sbjct: 432 FDDGSFVAEVDEIKS 446 >gi|15598972|ref|NP_252466.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa PAO1] gi|14194725|sp|Q9HXL8|EX7L_PSEAE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|9949948|gb|AAG07164.1|AE004796_9 exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa PAO1] Length = 459 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 140/500 (28%), Positives = 227/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ LD +VS+L+ + ++E V V GE+S +SGH YF+LKD++ Sbjct: 4 DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L A E Sbjct: 62 AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLF+ + K P+P P+ I +++SP+GAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+A + Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ + R+ + Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAR----------------------------------- 379 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L R + + L + TL RGY+ + D I Sbjct: 380 EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLKARLAEGELEVRVED 447 >gi|270290383|ref|ZP_06196608.1| exodeoxyribonuclease VII, large subunit [Pediococcus acidilactici 7_4] gi|304384738|ref|ZP_07367084.1| exodeoxyribonuclease VII large subunit [Pediococcus acidilactici DSM 20284] gi|270281164|gb|EFA26997.1| exodeoxyribonuclease VII, large subunit [Pediococcus acidilactici 7_4] gi|304328932|gb|EFL96152.1| exodeoxyribonuclease VII large subunit [Pediococcus acidilactici DSM 20284] Length = 447 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 155/502 (30%), Positives = 240/502 (47%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS L+ ++K V+ L V V GEIS +R +GH YFS+KD ++I+ I Sbjct: 2 TNDQYLTVSALTQYIKRKFDVDPYLHRVYVVGEISNFRLR-VNGHQYFSIKDEQAKINVI 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F PEEG+ +V G+I+ +PG+ YQ+ ++S+ P G G L A E+ K KL Sbjct: 61 MFKSAFAKVKFQPEEGMRVIVSGRISVYPGNGSYQLYVDSMQPDGVGALYQAYEQLKAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K IP PK IAV+TS +GAVIRDI+ + R+P +++++FPV VQG+E Sbjct: 121 DKEGLF-KAPKQAIPRFPKKIAVVTSRSGAVIRDIITTVKRRYPIVQLVLFPVAVQGNEA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 IA I +NTL P D IIL RGGGSIEDLW FN+E++ RAI S IP IS+ Sbjct: 180 APNIAAQIKFINTL------PDFDTIILGRGGGSIEDLWPFNEEVVARAIFESRIPTISS 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+A PV + + L E R+ N ++K K Sbjct: 234 VGHETDTTIADLVADVRAATPTAAAELATPVLTDVLTDLQKTELRVINAFKNILKIKQQQ 293 Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + +D+L L + + + + + +R+ + + Sbjct: 294 ARQLENSYIFQEPQRLYEGYVQNVDQLTERLRNAQKQYLADRSAELVKLQHRLLVNNPQN 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + Q + ++ + + + Sbjct: 354 QVDLATQKVGYLREQL---------------------------------------LSVIT 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + L + + + RGYT + + + L+ Sbjct: 375 RRFTQSQTQM--------QKLVAALDNLSPLRIMSRGYTYVT-KDEQVVNSVEKLSVNDA 425 Query: 485 ILINFFDGQANAIVINKAPPKE 506 I +NF DG A+AI+ ++ Sbjct: 426 IKLNFSDGSADAIIKTINNEEK 447 >gi|331701509|ref|YP_004398468.1| exodeoxyribonuclease 7 large subunit [Lactobacillus buchneri NRRL B-30929] gi|329128852|gb|AEB73405.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus buchneri NRRL B-30929] Length = 447 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 160/503 (31%), Positives = 257/503 (51%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + + +VS L+ ++K V+ L+ V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MANDYLTVSALTKYIKRKFDVDPYLTKVYLTGEISNFRLRPNA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K N+++F+PEEG++ LV+G I+ + S YQI +E + P G G L A E+ K+KL Sbjct: 60 MFKSAFNRLKFIPEEGMKVLVVGHISVYEPSGSYQIYVEQMEPDGVGQLYQAYEQLKQKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+ + P+ PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG E Sbjct: 120 STEGLFNLPKQ-PLAKFPKRIAVVTSPSGAVIRDIITTVRRRYPIAQIVLFPALVQGTEA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I ++N + D +I+ RGGGSIEDLW FN+E + RAI S IP+IS+ Sbjct: 179 SADIVRQIERVNQI------GNFDTLIVGRGGGSIEDLWPFNEENVARAIVASKIPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVP + + L + R+ N ++++ Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVDLRTTQNRIINATYQVVQQDKQR 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + + RLD L + L + + I ++ F+ + R++ + Sbjct: 293 LKRLRQSTVFTTPQRIYETFAQRLDLLTQRLYNQSDKITGKRKDRFSDLKLRLRLVAPTY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I++ +Q + + + + Q+L+ + + Sbjct: 353 TIREEQQKLATLKGRLNRATTQNLKNVSQHYQM--------------------------- 385 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + L RGYT D +FI + +L++K Sbjct: 386 --------------------LVGSLDHLSPLKILSRGYTYTTDEQGHFIKRVADLSSK-T 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 I ++F DG NA V KE+ Sbjct: 425 IDVHFSDGIVNASVNQINAKKEK 447 >gi|134095670|ref|YP_001100745.1| exodeoxyribonuclease VII large subunit [Herminiimonas arsenicoxydans] gi|189037845|sp|A4G7Y7|EX7L_HERAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|133739573|emb|CAL62624.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) [Herminiimonas arsenicoxydans] Length = 453 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 136/501 (27%), Positives = 229/501 (45%), Gaps = 58/501 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + +VS L+ + ++E + + GEIS + +SGH YF+LKD+ + Sbjct: 6 PNPNQTPTSN-VLTVSALNQAVSRMLERSFPLTWIAGEISNFT-RAASGHWYFTLKDDAA 63 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ A++++G +F+P EG V +T + YQ+ +E++ +G G L A + Sbjct: 64 QVRAVMFRGRAQYTDFMPREGDRVEVRALVTLYAPRGDYQLSVEAIRRAGVGNLYEAFLQ 123 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K+KL EGLF K P+P + I ++TSP A +RDIL + R P +R I++P V Sbjct: 124 LKEKLATEGLFDPARKRPLPLFARTIGIVTSPQAAALRDILTTLQRRAPHVRAILYPTPV 183 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ +IA AI + E D++++ RGGGSIEDLW FN E++ R I I Sbjct: 184 QGEGAANKIAQAIATASARAE------CDVLLVCRGGGSIEDLWSFNHEIVARTIVGCDI 237 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+I +GHETD+T+AD+AAD+RAPTPT AAE+A + + L + + R + Sbjct: 238 PVIVGVGHETDFTIADFAADVRAPTPTAAAELAATPRTEWLARLQTEADDMRRALKRQLS 297 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 TL+ L + L + T++ + +L L L H I + + H+ NR + Sbjct: 298 DTAQTLDWLSRRLISPSATIAHKQMKLQNLQARLGHATRIPLGKAQFALAHLRNRWLTQL 357 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 IQ+ R + E + + Q K R ++ Sbjct: 358 PDTRIQRAR--VAEHARRLS-------------------------NQMKTRSATQEQRLR 390 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L ++ + + TL+RGY + D + + + L Sbjct: 391 ALSAQL----------------------EMLNPQRTLERGYAIVSDEKGHIVRAPQELRP 428 Query: 482 KTRILINFFDGQANAIVINKA 502 + + + +G A + + Sbjct: 429 RQNVTVRLAEGSAQIGIASVQ 449 >gi|163790198|ref|ZP_02184631.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. AT7] gi|159874473|gb|EDP68544.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. AT7] Length = 446 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 150/502 (29%), Positives = 234/502 (46%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + + +V+ L+ ++K E + L + + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MSNDYLTVTALTRYIKRKFERDPYLDRIYLTGEISNFRNRPNA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F PEEG++ LVIG+IT + S YQI IE + P G G L ALE+ KKKL Sbjct: 60 MFKPAFQKLKFTPEEGMKVLVIGRITLYEASGNYQITIEHMEPDGVGALYQALEEMKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF + IP PK IAVITSP+GAV+RDI+ I RFP ++++I+P VQG + Sbjct: 120 RHEGLFDAPKQL-IPTFPKRIAVITSPSGAVVRDIMTTIKRRFPIVQLVIYPTLVQGTKA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++I + D +I+ARGGGSIEDLW FN+E++ RAI + PIIS+ Sbjct: 179 AEAIVSSIRMV------EEKGDFDTMIIARGGGSIEDLWPFNEEIVARAIFEAQTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE++VP+ + L+ RL R ++ Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELSVPLLSDELIKIDQLKLRLVQSYARKVENLNQR 292 Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + +LD L L ++E + N ++ + Sbjct: 293 LAGHLSSYIFNQPQRLYEGYAQKLDLLTERLIRSMEEKNQQLKNELNVHTLQLNAQNPAQ 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ + + + ++ ++ Sbjct: 353 LVKQKYSDLTVMDRQLTTQMEWYMENQT-------------------------------- 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + L + L RGY+ + I + + + Sbjct: 381 ---------------KRFHYAVQSLDYLSPLKILNRGYSYAT-KDGKVIKDSKQVDVDDK 424 Query: 485 ILINFFDGQANAIVINKAPPKE 506 I I+ G A VI K + Sbjct: 425 IHIHLHKGNFEAKVIKKEEESK 446 >gi|39996866|ref|NP_952817.1| exodeoxyribonuclease VII large subunit [Geobacter sulfurreducens PCA] gi|81832034|sp|Q74CA7|EX7L_GEOSL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|39983754|gb|AAR35144.1| exodeoxyribonuclease VII, large subunit [Geobacter sulfurreducens PCA] gi|298505879|gb|ADI84602.1| exodeoxyribonuclease VII, large subunit [Geobacter sulfurreducens KN400] Length = 447 Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 149/491 (30%), Positives = 242/491 (49%), Gaps = 56/491 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS+L+ ++ ++E N HV V GE+S +SGH YF+LKD ++I ++++ + Sbjct: 9 ILTVSQLTSLIRGVLEENFEHVWVEGEVSNL-ATPASGHLYFTLKDGAAQIRCVMFRASS 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F P +G+ +V G++T + +YQ+++E L P G G L A + K++L EGLF Sbjct: 68 RALKFRPRDGMGLIVRGRVTVYDQRGEYQLLVEYLEPRGIGALQLAFIQLKEQLAREGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 +D+HK PIP +P+ I V+TS TGA I DIL ++ RF + ++I PVKVQG+ +EIA Sbjct: 128 ADEHKKPIPPLPQKIGVVTSATGAAIHDILTVLNRRFANVEILIRPVKVQGEGAAEEIAA 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N D++I+ RGGGS+EDLW FN+EM+ RAI S IP+ISA+GHE D Sbjct: 188 AIDDFNR------YGVIDVMIVGRGGGSLEDLWAFNEEMVARAIHRSRIPVISAVGHEVD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTP+ AAE+ V KE L + L L RL +++ + L+SL + Sbjct: 242 FTIADFVADLRAPTPSAAAELVVKSKEELAARLEFLRHRLVQGGRQVLAERRGELDSLNR 301 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + + R+D L LE + R + + ++ +++ R+ Sbjct: 302 SLRDPSMLVGHLSQRVDDLSARLERGTANSVRRHRGSLDLLTTNLRLTNPAVRLERARER 361 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 ++ E + L Sbjct: 362 VIALAGRNETL-----------------------------------------------LR 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFD 491 + + L + + T+ RGY+ + +T LA R+ + Sbjct: 375 RFLDHLREKTLVAAARLDTLSPLATMARGYSIVLKLPERCLVTDSARLAPGDRVELCLRR 434 Query: 492 GQANAIVINKA 502 G+A V + + Sbjct: 435 GRAGCCVESSS 445 >gi|223043160|ref|ZP_03613207.1| exodeoxyribonuclease VII, large subunit [Staphylococcus capitis SK14] gi|222443371|gb|EEE49469.1| exodeoxyribonuclease VII, large subunit [Staphylococcus capitis SK14] Length = 445 Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 145/492 (29%), Positives = 243/492 (49%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG Sbjct: 5 LSVTTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLTKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F K PIP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FDSSVKKPIPKFPKRIAVLTASTGAAIRDIHSTINSRYPLVEQIHISTLVQGTQAKQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I +TL D II+ RGGGSIEDLW+FN+E +V+AI + + PIISA+GHET Sbjct: 184 EKIEHADTL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIYSCNTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + + L I + ++ + LN L Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELMQQIKQYQFSLTRFIKQYVEQQKKQLNHLN 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L ++L+ + + + ++ + L +NI ++ Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLKQLMSTYLEKHTQNLKLLKQHFNLKTLNNNISQD 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + H+ + ++ + Q + +++++ Sbjct: 357 KMHVSQYRERMTQAITNE------------------------------------LSKLKT 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L +KI++ L + + NT+ RGY + + ++ +T ++ I + Sbjct: 381 DLKNKIEN-----------LNNLSPTNTMLRGYAIV-NKDDKVVTSTHDITENDTITLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGNVDATVKKV 440 >gi|288560069|ref|YP_003423555.1| exodeoxyribonuclease VII large subunit XseA [Methanobrevibacter ruminantium M1] gi|288542779|gb|ADC46663.1| exodeoxyribonuclease VII large subunit XseA [Methanobrevibacter ruminantium M1] Length = 508 Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 151/517 (29%), Positives = 247/517 (47%), Gaps = 38/517 (7%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+YH+K +V +S+L +V VRGE+S ++ SGH YF+LKD +S I I Sbjct: 1 MEEEYLTVTKLNYHIKRLVNSDSSLKNVYVRGELSNFKRYP-SGHLYFTLKDQNSEIGGI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG ++++F P+ G++ L+ G + +P Y+I + L G G L A E+ K+KL Sbjct: 60 MFKGPASRLKFEPKNGMKVLINGYVDVYPKQGNYKIYAQKLTEDGIGDLYIAYEQLKRKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 G F D+HK IP PK + V+T+ TGA IRDI+ I R+PL +I+FP VQG+ Sbjct: 120 SALGWFDDEHKQEIPKFPKRVGVVTASTGAAIRDIVITIKRRWPLCEIILFPSLVQGNMA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 PK I I+ D +I+ RGGGSIEDLW FNDE + + I S PIISA Sbjct: 180 PKNIIKQIIL------ADNEFDLDTLIIGRGGGSIEDLWAFNDETLAKVIFFSKTPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE DWT++DY ADLRA TPT AAE+AVP ++S++ NL+ RLN +I + ++ Sbjct: 234 VGHEIDWTISDYVADLRAATPTAAAELAVPDINEIESNIKNLDDRLNKVIDKQFNENKDS 293 Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N D + LD L + +I+ +++ + + Sbjct: 294 FEKLVNRNLFKNPDLLYNKKIMYLDSAKSRLAVCSKNMIYDNKIRVSNVKSSLIFKNPKM 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + + ++ K + + + + + K+ Sbjct: 354 LFESKSNKYNQLKYNLNSSGKILIGKKESKLDKYRNSF--VFKSPNRLFESKANRYFKVR 411 Query: 425 TRIEFILSHKIKSCHT-----------------------SVSITTRILQSFAYKNTLKRG 461 T +E+ + ++ + L NTLKRG Sbjct: 412 TNLEYSSINLLRDKKDNLNEIKKSNPIKNPQSILEPNEIRLDKYIDKLDVLNPLNTLKRG 471 Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 YT + + +++ +++ + + F DG + V Sbjct: 472 YT-VSRVDGKVVSKAKDVKKDDILEVEFDDGNVSTKV 507 >gi|310642664|ref|YP_003947422.1| exodeoxyribonuclease 7 large subunit [Paenibacillus polymyxa SC2] gi|309247614|gb|ADO57181.1| Exodeoxyribonuclease 7 large subunit [Paenibacillus polymyxa SC2] Length = 455 Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 150/491 (30%), Positives = 234/491 (47%), Gaps = 60/491 (12%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YS+ +L+ +++ +ES+ LS V +RGEIS + HSSGH YF+LKD SRI +I++ Sbjct: 7 IYSIKDLNRYIRMKLESDQVLSDVWIRGEISNFTH-HSSGHMYFTLKDEGSRIRSIMFAT 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F+P+EG + G ++ + +YQ + P G G+L A E+ K+KL EG Sbjct: 66 HNRRLPFVPKEGTRVIARGNVSVYERDGQYQFYATQMQPDGIGSLYLAYEQLKQKLDAEG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF K +P P I VITSPTGA +RDI+ + R+P ++++PV VQG I Sbjct: 126 LFDTARKRNLPAHPATIGVITSPTGAAVRDIITTLQRRYPQAGIVLYPVLVQGKGAAPSI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +N ++E ++I+ RGGGS+E+LW FN+E + RAI S IP+ISA+GHE Sbjct: 186 VKAIEAMNRMQE------VQVMIVGRGGGSLEELWAFNEEAVARAIYASVIPVISAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINTLN 308 TD+T+AD+ ADLRA TPT AAE+AVP + L+ L+ E RL N + + ++ + Sbjct: 240 TDFTIADFVADLRAATPTAAAELAVPHQGELRDQLLQREQRLRNALRQRLEASRERLLRL 299 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + R+D L + L + ++ I+ Sbjct: 300 RRSPVLLHPRRYMLQHAERMDMLHQRLIRAAANRSRLNAEKNARMRQVLERFNPREQIRS 359 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ Q+ +E ++ AI R+Q I Sbjct: 360 ARKQTDMAQRQLESAMR--------------AITKTGRQQLHTGI--------------- 390 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487 R L + + + RGY+ + D I +++ I I Sbjct: 391 ------------------RQLDALSPLKVMARGYSLVYDEQEKRLIKSLKDVQPGDSIKI 432 Query: 488 NFFDGQANAIV 498 DGQ + V Sbjct: 433 KVSDGQLDCQV 443 >gi|260583698|ref|ZP_05851446.1| exodeoxyribonuclease VII, large subunit [Granulicatella elegans ATCC 700633] gi|260158324|gb|EEW93392.1| exodeoxyribonuclease VII, large subunit [Granulicatella elegans ATCC 700633] Length = 446 Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 153/498 (30%), Positives = 236/498 (47%), Gaps = 63/498 (12%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS L+ ++K+ + +L V + GEIS +R + H YFSLKD ++ I A Sbjct: 1 MSEEYVTVSALTKYIKYKFDKDPHLGRVYLTGEISNFRLRPT--HQYFSLKDENAIISAT 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ KI+F PEEG++ LVIGK++ F S +YQI IE + P G G L A E+ KKKL Sbjct: 59 MFQSAFKKIQFRPEEGMKVLVIGKVSVFEKSGQYQINIEHMEPDGVGALYLAYEQLKKKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLFS K PIP PK IA++TS +GAVI+DI ++ RFP ++++++P VQG Sbjct: 119 EAEGLFSLPKK-PIPQFPKKIAILTSESGAVIQDIQTTVARRFPIVQLVLYPTVVQGVHA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I + + D++I+ RGGGSIEDLW FN+E +VR +A SIP+IS+ Sbjct: 178 VNSILKNLDLV-------EKEDYDVVIIGRGGGSIEDLWAFNEEPVVRRVAELSIPVISS 230 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D+ +D+RA TPT AAE+A PV + L NL+ RL + R ++ K Sbjct: 231 VGHETDTTLIDFVSDMRAATPTAAAEIATPVLMEIHQQLRNLQTRLEQALSRQLQIKRER 290 Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + + N ++ + R+D+L L+ ++ + Sbjct: 291 MQALANASIFQNPERIYQVYQQRVDQLEMRLQQMMQQSVQ-------------------- 330 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 RQ +++ Q +E R+ ++ L Sbjct: 331 ---HKRQQLVKNQHRLE------------------------LGSPSRRVQTEKQALQYLA 363 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+E +K + L + + RGY +Q I L Sbjct: 364 KRLEQAQGQLMKDKKQQFQRAIQQLDLLSPLKIMNRGYGILQQEE-TIIKSVDQLEVNQE 422 Query: 485 ILINFFDGQANAIVINKA 502 + I DG + V + Sbjct: 423 LTIQLVDGTVRSKVTSVE 440 >gi|218889939|ref|YP_002438803.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa LESB58] gi|226697597|sp|B7UXJ1|EX7L_PSEA8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|218770162|emb|CAW25924.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa LESB58] Length = 459 Score = 344 bits (881), Expect = 3e-92, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 226/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ LD +VS+L+ + ++E V V GE+S +SGH YF+LKD++ Sbjct: 4 DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L A E Sbjct: 62 AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLF+ + K +P P+ I +++SP+GAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAGEGLFASERKRLLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+A + Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ + R+ + Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERQLAVRHERLVRLETRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAR----------------------------------- 379 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L R + + L + TL RGY+ + D I Sbjct: 380 EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLKARLAEGELEVRVED 447 >gi|313497393|gb|ADR58759.1| XseA [Pseudomonas putida BIRD-1] Length = 463 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 239/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF ++ LD +VS+L+ + ++E V V GEIS +SGH YF+LKD+ Sbjct: 8 DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 66 AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +ITSPTGAVIRDI+ R P + + + P Sbjct: 126 ALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I AI ++L D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L+ L L+ RL I + Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLRQRLDGLQRRLLLRIQNRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L SL + L + + L RLD L L + + ++ + R+ + Sbjct: 299 THDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 N++ Q + + + + +++ +L R++ + ++ Sbjct: 359 HPGRNLKLLNQRLDSLAERLPRAMRE--------------VLKDRRQRFQAQL------- 397 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D I Sbjct: 398 --------------------------QTLQVVSPLATLARGYSILLDEQGQAIRSAEQTR 431 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 432 NGQRLTARLNEGELLVRVED 451 >gi|325916954|ref|ZP_08179196.1| Exodeoxyribonuclease VII large subunit [Xanthomonas vesicatoria ATCC 35937] gi|325536805|gb|EGD08559.1| Exodeoxyribonuclease VII large subunit [Xanthomonas vesicatoria ATCC 35937] Length = 445 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 128/492 (26%), Positives = 224/492 (45%), Gaps = 60/492 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NQQILTPSQLNTLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRSRLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K P+P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD Sbjct: 124 GLFDAERKQPLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSA--- 180 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 A + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 181 ---AAQVTSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRARARIAQLQQHALGNAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + R + R+L ++ ++ R R+ + N Sbjct: 298 LALRLRAHSPQARLQLLQRRQEDAGRQLRAHMSQLLERLQARVQRGQTRLTAHNPQRN-- 355 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + QQ + + Sbjct: 356 -----LANLQQRLRAVHP------------------------------------------ 368 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486 + + +++ + R L++ + T+ RGY + + + + ++ R+ Sbjct: 369 QAAMQRRLQHDQLRLRGLVRSLEAVSPLATVARGYAIVTRPADGSVVRSAADVTPGERLR 428 Query: 487 INFFDGQANAIV 498 DG V Sbjct: 429 AQLADGSIAVRV 440 >gi|218885230|ref|YP_002434551.1| exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218756184|gb|ACL07083.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 511 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 122/510 (23%), Positives = 203/510 (39%), Gaps = 72/510 (14%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V EL+ ++ VE V VRG++S +SGH YF+LKD + ++ + ++G Sbjct: 13 IYTVGELTRAIRAAVEGGFPFVWVRGQVSNL-SRPASGHCYFALKDEDAVLNCVWFRGNQ 71 Query: 74 N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 + G E L G++T +P YQ+++E +G G Sbjct: 72 RDAEHFDPMTGEVFEDGPRPGLARTMANGQELLCAGRLTVYPPRGGYQLVVEMAQDAGLG 131 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLR 173 L E K +L E G F K P+P PK +AVIT+P+GA +RD L+ R + Sbjct: 132 RLHAQFEALKARLAERGYFDAARKRPLPRHPKRVAVITAPSGAAVRDFLRMADERGWGCE 191 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 + I PV VQGDE P IA A+ ++ + +++L RGGGS+EDLW FNDE + Sbjct: 192 IRIHPVPVQGDEAPPRIAAALAEVVAQGWAQ------VVVLIRGGGSLEDLWAFNDERVA 245 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 A+ S +P+++ IGHE D T+AD AD+RA TPT AA++ P + Sbjct: 246 TAVFGSPLPVLAGIGHEVDHTMADMTADVRAATPTHAAQLLWPER--------------- 290 Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 R+D L L +E R + Sbjct: 291 ----------------------------RELAQRVDELEMALTRGMERRFARLDEQLGAL 322 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + + + + + + + + + A + R Sbjct: 323 ARGLAWLSPERALARLDERFADAAARLGRA--WEMLARRDAARLDAADAALTRTLGPEAW 380 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI 473 + L R+ + + + L + L+RGY+ ++ + F+ Sbjct: 381 ERRERAVDALEARLRWAGERAVTGREHELERCALRLDALDPLRPLERGYSLVRRADGGFL 440 Query: 474 TQKRNLATKTRILINFFDGQANAIVINKAP 503 +A+ + + DG+ + V P Sbjct: 441 RSVAEVASGDALAVLVRDGEVDVTVRGARP 470 >gi|325839360|ref|ZP_08166799.1| exodeoxyribonuclease VII, large subunit [Turicibacter sp. HGF1] gi|325490480|gb|EGC92796.1| exodeoxyribonuclease VII, large subunit [Turicibacter sp. HGF1] Length = 447 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 149/495 (30%), Positives = 235/495 (47%), Gaps = 59/495 (11%) Query: 14 EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +V L+ ++K + NL H+ ++GEIS ++ HS GH YF+LKD+ ++I+A+++ Sbjct: 6 PLTVKALTKYIKLKFDYDKNLQHLLLKGEISNFK-RHSRGHFYFTLKDDEAQINAVMFAS 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 +++ F+P+EG++ +V G I + Y + ++ + G G L A + K++L EG Sbjct: 65 AASQVSFMPKEGMQVVVKGHIAVYEAGGSYSLYVKEMTEDGIGNLYVAFTQMKERLGAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF + K PIP P I VITSPTGA IRD+L I RFP ++V ++P VQG++ I Sbjct: 125 LFDARFKQPIPPFPHAIGVITSPTGAAIRDVLSTIKRRFPLVKVYVYPALVQGEQAAPSI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I Q N LK+ D +I+ RGGGSIEDLW FN+E++ RAI S IPIISA+GHE Sbjct: 185 VKCIQQANELKQ------VDTLIVGRGGGSIEDLWAFNEEIVARAIFESKIPIISAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ AD RAPTPTGAAE+AVP + L L RLN+ + K L+ L Sbjct: 239 TDFTIADFVADHRAPTPTGAAEIAVPNVVDVLKHLNQLNVRLNHNFNVQFEQKKQWLSQL 298 Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N + +L +L++ L+ + ++ + NR+ + Sbjct: 299 SNHYIMKNPHALFEQRLVYVSQLNDKLQYQLQQQLRKRQQILMMHSNRLIQHNPKQRVMN 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + ++ + Q L Sbjct: 359 YQHQLEYLSKALQSGMNQELANQKQHY--------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + L + LK+GYT + N +T ++ ++ + Sbjct: 386 --------------GLLLTKLDMLNPMSILKKGYTVTTNDKNEMVTSVSQVSVGQKVTVA 431 Query: 489 FFDGQANAIVINKAP 503 F DG A V Sbjct: 432 FDDGSFVAEVDEIKS 446 >gi|222151416|ref|YP_002560572.1| exodeoxyribonuclease VII large subunit homolog [Macrococcus caseolyticus JCSC5402] gi|222120541|dbj|BAH17876.1| exodeoxyribonuclease VII large subunit homolog [Macrococcus caseolyticus JCSC5402] Length = 445 Score = 343 bits (880), Expect = 4e-92, Method: Composition-based stats. Identities = 146/493 (29%), Positives = 227/493 (46%), Gaps = 61/493 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS L+ ++K + + L+ V ++GE+S ++ HSSGH YF+LKDN I +++ Sbjct: 5 EKYLSVSALTRYIKTKFDKDPYLTEVYIKGELSNFK-RHSSGHLYFALKDNDGVISCMMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K ++ F P+EG L+ G+++ + G YQ+ + G G L LE KKK E Sbjct: 64 KRDAAQLTFSPKEGDSVLITGRVSVYEGRGNYQLYATDIRLDGIGVLYERLEALKKKYFE 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 +G F+ ++K +P P+ IAV+T+ TGA ++DI +S R+PL V VQG+ Sbjct: 124 KGYFNVENKKQLPKYPEHIAVLTASTGAAVQDIRTTLSSRYPLAEVTYISTIVQGEAAKD 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I N + + L D+II+ RGGGSIEDLW FN+E +V AI + P+ISA+G Sbjct: 184 DIVNNLNTADQL-------GADVIIVGRGGGSIEDLWAFNEEGVVEAIYACNTPVISAVG 236 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TL+D AD RAPTPT AA MA P L L ++ + + + IK LN Sbjct: 237 HETDTTLSDLVADHRAPTPTAAAVMATPDSRELLVGLKQVDITMLRTMNQRIKRNNERLN 296 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L N + +LD ++ +I + +F+ I N+I + L + Sbjct: 297 YLSSYYIFKNPYMLIEQKMQKLDDFEHRMKLASFSLINQNKMNFHFISNKIDAQKLNTKL 356 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + I Q + K+ L +Q K++I Sbjct: 357 KYQYEQIHSMQN--------------VMKRTLSYKLSNYHQQLKHQI------------- 389 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 +L S + TL RGY ++ + I ++ + Sbjct: 390 --------------------ALLSSLSPAETLLRGYAIVRSED-EIIKSVYDVKEHDYVN 428 Query: 487 INFFDGQANAIVI 499 I DG+ A V Sbjct: 429 IQLNDGRIKAEVK 441 >gi|167470082|ref|ZP_02334786.1| exodeoxyribonuclease VII, large subunit [Yersinia pestis FV-1] Length = 434 Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 135/481 (28%), Positives = 221/481 (45%), Gaps = 53/481 (11%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 + + + EIS + +SGH YF+LKD+ +++ +++ + + F P+ G + LV Sbjct: 2 MGQIWLTAEISNF-SQPASGHWYFTLKDDRAQVRCAMFRNSNRRTTFRPQNGQQVLVRAS 60 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 IT + YQ+I ES+ P+G G L E+ K++L EGLF HK P+P K + VI Sbjct: 61 ITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQQLAAEGLFDQSHKQPLPHPAKQVGVI 120 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 TS +GA + D+L + R P L VII+P VQG + P +I AI N E D Sbjct: 121 TSASGAALHDVLHVLQRRDPSLPVIIYPTSVQGVDAPLQIVRAIQLANLRAE------CD 174 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 ++I+ RGGGS+EDLW FNDE + RAI NS IPI+SA+GHETD T+AD+ ADLRAPTP+ A Sbjct: 175 VLIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVSAVGHETDVTIADFVADLRAPTPSAA 234 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 AE+ + L + + R+ + + + L L L +R Sbjct: 235 AELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQQFTRLEHRLQQQHPHLRLARQ---- 290 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + +L+ Q+ +E+ + +R Sbjct: 291 ---------------------------------------QTLLLKLQRRLEESAQTQIR- 310 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 L K+ + + + Q + +I + +++ R+ + ++ I L+ Sbjct: 311 -LLSKRTERLQQRLQQVQPQGQIHRYNQRVQQQEYRLRQAVERQLNGYRQRFGIACSQLE 369 Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 + + TL RGY+ Q + + + ++ DG + + K+ K Sbjct: 370 AVSPLATLARGYSVTQTPAGALLKTTKQVQAGDKLTTRLQDGWVESEITQVTVAKKSRQK 429 Query: 511 K 511 K Sbjct: 430 K 430 >gi|254242467|ref|ZP_04935789.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa 2192] gi|126195845|gb|EAZ59908.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa 2192] Length = 459 Score = 343 bits (879), Expect = 5e-92, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 226/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ LD +VS+L+ + ++E V V GE+S +SGH YF+LKD++ Sbjct: 4 DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L A E Sbjct: 62 AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLF+ + K P+P P+ I +++SP+GAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+A + Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L E + ++ + R+ + Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDQDMRLRRAFERQLAVRHERLVRLETRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAR----------------------------------- 379 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L R + + L + TL RGY+ + D I Sbjct: 380 EVLKDR------------RQRLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLKARLAEGELEVRVED 447 >gi|148546310|ref|YP_001266412.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida F1] gi|148510368|gb|ABQ77228.1| Exodeoxyribonuclease VII large subunit [Pseudomonas putida F1] Length = 463 Score = 343 bits (879), Expect = 6e-92, Method: Composition-based stats. Identities = 144/500 (28%), Positives = 238/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF ++ LD +VS+L+ + ++E V V GEIS +SGH YF+LKD+ Sbjct: 8 DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 66 AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL EGLFS + K P+P P+ I +ITSPTGAVIRDI+ R P + + + P Sbjct: 126 ALKDKLGAEGLFSTERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I AI ++L D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAP+P+ AAE+ P L+ L L+ RL + + Sbjct: 239 TPIVSAVGHETDVSISDFVADVRAPSPSAAAELLAPDNSGLRQRLDGLQRRLLLRMQNRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L SL + L + + L RLD L L + + ++ + R+ + Sbjct: 299 THDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 N++ Q + + + + +++ +L R++ + ++ Sbjct: 359 HPGRNLKLLNQRLDSLAERLPRAMRE--------------VLKDRRQRFQAQL------- 397 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D I Sbjct: 398 --------------------------QTLQVVSPLATLARGYSILLDEQGQAIRSAEQTR 431 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 432 NGQRLTARLNEGELLVRVED 451 >gi|167032040|ref|YP_001667271.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida GB-1] gi|166858528|gb|ABY96935.1| exodeoxyribonuclease VII, large subunit [Pseudomonas putida GB-1] Length = 463 Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 239/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF ++ LD +VS+L+ + ++E V V GEIS +SGH YF+LKD+ Sbjct: 8 DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 66 AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +ITSPTGAVIRDI+ R P + + + P Sbjct: 126 ALKEKLGAEGLFSTERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I AI ++L D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 186 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 238 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L+ RL + + Sbjct: 239 TPIVSAVGHETDVSISDFVADMRAPTPSAAAELLAPDNSGLQQRLDGLQRRLLLRMQNRL 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L SL + L + + L RLD L L + + ++ + R+ + Sbjct: 299 THDRLRLESLTRRLRHPGERLRQQAQRLDDLDMRLRRAFMLNLNQRRERLARLDTRLAAQ 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 N++ +Q + + + + ++ +L R++ + ++ Sbjct: 359 HPGRNLKLLKQRLDSLAERLPRAMRD--------------VLKDRRQRFQAQL------- 397 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D I Sbjct: 398 --------------------------QTLQVVSPLATLARGYSILLDDQGQAIRSAEQTR 431 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 432 NGQRLTARLNEGELLVRVED 451 >gi|320353185|ref|YP_004194524.1| exodeoxyribonuclease VII large subunit [Desulfobulbus propionicus DSM 2032] gi|320121687|gb|ADW17233.1| exodeoxyribonuclease VII, large subunit [Desulfobulbus propionicus DSM 2032] Length = 462 Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 131/495 (26%), Positives = 227/495 (45%), Gaps = 57/495 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 D +VSEL+ ++ ++E+ + V GEIS SGH YF+LKD+ ++I A+++K Sbjct: 3 DRRVLTVSELNESIRLLLEAQYPFISVGGEISNL-HKPYSGHCYFTLKDSGAQIRAVLFK 61 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + P++G + G+I+ + +YQ+I++++ G+G L A E+ K++L E Sbjct: 62 MQQRYLSRFPKDGDHVVCRGRISVYEPRGEYQLIVDTIDHQGAGALQLAFEQLKQRLATE 121 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K P P I ++TSP GA + D + + R P +R+ ++PV VQG++ E Sbjct: 122 GLFDEHRKRRPPGFPGHITLVTSPRGAAVHDFIHIANRRCPMVRIAVYPVAVQGEQASAE 181 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + A+ ++N D+I+L RGGGSIEDLW FNDE + RAI S++P++SA+GH Sbjct: 182 MIRALEEINARVAT------DLIVLCRGGGSIEDLWAFNDEHLARAIRRSAVPVVSAVGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+T+AD+AADLRAPTP+ AAE+ P L+ + + RL ++ + L Sbjct: 236 EIDFTIADFAADLRAPTPSAAAELLTPDSAALRVRINQQDERLRRLLRSRTEGAAQRLLV 295 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + L + L RLD+L LE +L + + + H + + + Sbjct: 296 ARRRLESMRHPLERLMLRLDQLTTRLERSLHTTLDARGQRLAHAARTLARLNPVRRVHLY 355 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 Q + E + + + ++ + Sbjct: 356 EQRLNEARIRLLRAIRTQYQG--------------------------------------- 376 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNNNFITQKRNLATKTRILI 487 + +L + + TL+RGY ++ +T + T + + Sbjct: 377 --------KEERFARVAGVLHAVSPLATLERGYAIVRTTEKKQRVVTGYGQVRTGEVVEV 428 Query: 488 NFFDGQANAIVINKA 502 G V + Sbjct: 429 LLHRGALQCRVEQVS 443 >gi|325685898|gb|EGD27964.1| exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 456 Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats. Identities = 143/507 (28%), Positives = 250/507 (49%), Gaps = 58/507 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +D +VSEL++++K + + L + ++GE+S +R GH YFSLKD+ Sbjct: 1 MDSIKGMDEKYLTVSELNWYVKQKFDQDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 S+I+ ++++G +K++F PEEG++ V G+++T+ YQ +S+ P+G G L Sbjct: 60 SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++KL +EGLF+ +HK P+P P IAV+TS +GAVI DI+ + RFP + +FP + Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+IS++GHETD TL D AD RA TPT AAEMA P + + + L+ RL I +I Sbjct: 235 MPVISSVGHETDTTLCDLVADCRAATPTAAAEMATPALTLVLAEIGQLQTRLLTDIRAVI 294 Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L + + ++D+L ++L +E+I+ + + + + R++ Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSQMMEVIVKDQGQKLSLLTQRLQ 354 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 I++ +Q + +E +K+ L ++ Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L ++ TL RGY+ D + N + + Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427 Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505 LA ++ ++ DGQA + K Sbjct: 428 LAPGDQVRLHLKDGQAIGRIEEIKEGK 454 >gi|26987763|ref|NP_743188.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida KT2440] gi|31563091|sp|Q88P26|EX7L_PSEPK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|24982456|gb|AAN66652.1|AE016293_2 exodeoxyribonuclease VII, large subunit [Pseudomonas putida KT2440] Length = 459 Score = 342 bits (878), Expect = 7e-92, Method: Composition-based stats. Identities = 145/500 (29%), Positives = 239/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF ++ LD +VS+L+ + ++E V V GEIS +SGH YF+LKD+ Sbjct: 4 DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 62 AQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +ITSPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I AI ++L D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 182 VQGREAIAQIVRAIRLADSL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L+ L L+ RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLRQRLDGLQRRLLLRMQNRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L SL + L + + L RLD L L + + ++ + R+ + Sbjct: 295 THDRLRLESLTRRLRHPGERLRQRAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 N++ Q + + + + +++ +L R++ + ++ Sbjct: 355 HPGRNLKLLNQRLDSLAERLPRAMRE--------------VLKDRRQRFQAQL------- 393 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D I Sbjct: 394 --------------------------QTLQVVSPLATLARGYSILLDEQGQAIRSAEQTR 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 NGQRLTARLNEGELLVRVED 447 >gi|169828972|ref|YP_001699130.1| exodeoxyribonuclease 7 large subunit [Lysinibacillus sphaericus C3-41] gi|226697594|sp|B1HRX7|EX7L_LYSSC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|168993460|gb|ACA41000.1| Exodeoxyribonuclease 7 large subunit [Lysinibacillus sphaericus C3-41] Length = 452 Score = 342 bits (878), Expect = 7e-92, Method: Composition-based stats. Identities = 143/502 (28%), Positives = 239/502 (47%), Gaps = 60/502 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +V L+ ++K + +L V V+GE+S + IH SGH YF+LKD+ +RI A Sbjct: 2 SSASYLTVKALTKYIKRKFDADPHLREVYVKGELSNVK-IHQSGHIYFTLKDDGARIAAT 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K+ F P+EG++ + G + + G YQ+ ++ + P G G+L A + K++L Sbjct: 61 MFKAAATKLAFEPKEGMQVFIRGDVNVYEGYGTYQLYVQEMQPDGIGSLFVAFNQLKEQL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF K IP P+ I V+TS TGA IRDI + R+PL ++I+P VQG + Sbjct: 121 QKEGLFKLDWKQSIPKFPEKIGVLTSTTGAAIRDICTTLKRRYPLAEILIYPTLVQGAQA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I + N ++I+ RGGGSIEDLW FN+E++ RAI S IPIISA Sbjct: 181 APNIVQNIQRANQ------DATCQVLIVGRGGGSIEDLWAFNEEIVARAIFESRIPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+ADY +DLRAPTPT AAEMAVP + L +++ +++++ ++ + + Sbjct: 235 VGHETDTTIADYVSDLRAPTPTAAAEMAVPDQMELFQRVLSQKSQIHQMVRSQLMAERQR 294 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN L + L ++ RL +L L+ +++ + +K + + + Sbjct: 295 LNKLQQSYPLSMPERLYRPFTERLAQLESGLQTAMQVDLMKKSAQLQQLHSTVAQHSPKK 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +++ + + Q + + + Sbjct: 355 ALAFHQRELEARMQQLTRAATYY------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + T R L++ + L RG+T + + I + + Sbjct: 378 ----------VAKQQQQFEATIRTLEALNPLSILTRGFTVAY-KDQHMIKSSTEVQEQDY 426 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + + F DG+ A V + P E Sbjct: 427 LTLAFHDGKVVAEVKDILPKNE 448 >gi|325983269|ref|YP_004295671.1| exodeoxyribonuclease VII, large subunit [Nitrosomonas sp. AL212] gi|325532788|gb|ADZ27509.1| exodeoxyribonuclease VII, large subunit [Nitrosomonas sp. AL212] Length = 450 Score = 342 bits (877), Expect = 8e-92, Method: Composition-based stats. Identities = 140/507 (27%), Positives = 233/507 (45%), Gaps = 58/507 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN FS N + H +VSEL+ + K ++E N+ + ++GEIS + + SGH YFSLKDN Sbjct: 1 MNLFSPHNPI-HKILTVSELNNNTKQLLEHNIPLLWIKGEISNLK-RYQSGHWYFSLKDN 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ I++ P +G++ V+ +T + +Q+ +E++ +G G L A Sbjct: 59 QAQVRCVLFSHKNQFIDWRPIDGMQVEVLALVTLYEPRGDFQLNVETMRRAGLGELFAAF 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E K KL + GLF+ + K P+P P+ + +ITS A ++D+L + R P L +II+P Sbjct: 119 ETLKSKLQQAGLFNPEKKKPLPIFPQQVGIITSLDTAALQDVLSTLQRRMPSLSIIIYPT 178 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG IA I E D++IL RGGGSIEDLW FN+E + AI + Sbjct: 179 LVQGKTAANSIAEIIKTACQRTE------CDVLILCRGGGSIEDLWAFNEETVALAIESC 232 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 SIP+IS IGHETD+T+AD+ AD+RAPTPT AAE+A + L L L R+ + Sbjct: 233 SIPLISGIGHETDFTIADFVADMRAPTPTAAAELASKNRIELSHRLNILHQRMYRTTLHR 292 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 I++ + ++ L L + + +L+ + + + Sbjct: 293 IEHAMQQVDLLSHRLIYPGDKIRQQ--------VIHQQHLQDRLIKTW------------ 332 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + ++K + +L+ Q + + R L + Sbjct: 333 ---TYQLEKRQWKLLDFNQRLMAAHPRVTRLQEQH-------------------DELLSR 370 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + +R IL ++ + + L RGY+ + I + + Sbjct: 371 LCYAYSRYSEILFSGLRHLQIQLFH-------LNPQAILDRGYSIAHSNDGTIIRSSKQI 423 Query: 480 ATKTRILINFFDGQANAIVINKAPPKE 506 + RI + F G A VI + Sbjct: 424 HSGDRIKVKFAQGICKADVIMTSDSDP 450 >gi|148285036|ref|YP_001249126.1| exodeoxyribonuclease VII large subunit [Orientia tsutsugamushi str. Boryong] gi|146740475|emb|CAM81010.1| exodeoxyribonuclease VII large subunit [Orientia tsutsugamushi str. Boryong] Length = 456 Score = 342 bits (877), Expect = 8e-92, Method: Composition-based stats. Identities = 164/490 (33%), Positives = 260/490 (53%), Gaps = 52/490 (10%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + EY+V ELS H+K +E + VRGE+SG + I SSGH+YF+LKD+ + ++ + WK Sbjct: 19 NAKEYTVHELSLHIKSAIEYQFGVLKVRGEVSGLK-IASSGHSYFNLKDDKAVLNCVCWK 77 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 TLN ++ E+GIE + G++TT+ G S+YQ+++E++ +G G+L+ +RK+KL++E Sbjct: 78 TTLNLVKIKVEDGIEVIATGRLTTYSGQSRYQLVVENICIAGLGSLMQIFFQRKEKLMKE 137 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF + K +P P II VITS +GAVIRDI R++ RFP R++I+PV VQG+ E+ Sbjct: 138 GLFDNSRKKKLPAFPMIIGVITSISGAVIRDIAHRVNDRFPSRLLIWPVTVQGNNSANEV 197 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+AI + N + P++II+ARGGGS+EDLW FN+E++VRAIA+S IPI+SAIGHE Sbjct: 198 ASAIQECNNMLASNHDLAPEVIIIARGGGSVEDLWSFNEEIVVRAIASSVIPIVSAIGHE 257 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+TLAD+AADLRAPTP+ AAEM VPV ++ L N ++N++ +K + LN+ Sbjct: 258 VDFTLADFAADLRAPTPSAAAEMVVPVLADIKMRLNNSMNQINHVTFNYLKCSVMLLNNC 317 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D L Sbjct: 318 GNIVQKLKTMIDLNYQKFDELVF-------------------------------RFDAKI 346 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + +E Q+ I Q + + + ++ L ++ + Sbjct: 347 EQFVELQKRILQ--------------------NNVLIDPSKLVQLYALKLENLNNKLYQL 386 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + V + +L + Y LKRG+ I+ ++ L + +I I Sbjct: 387 VKRLFVNLDNKVYLLDSLLNNMDYSRVLKRGFAIIRLVEGPVVSSLSQLKSNDKIKIQLQ 446 Query: 491 DGQANAIVIN 500 DG A + + Sbjct: 447 DGVRQATIDS 456 >gi|78223055|ref|YP_384802.1| exodeoxyribonuclease VII large subunit [Geobacter metallireducens GS-15] gi|123571798|sp|Q39UJ7|EX7L_GEOMG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|78194310|gb|ABB32077.1| Exodeoxyribonuclease VII large subunit [Geobacter metallireducens GS-15] Length = 453 Score = 342 bits (877), Expect = 9e-92, Method: Composition-based stats. Identities = 160/502 (31%), Positives = 248/502 (49%), Gaps = 61/502 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M F +K +VS+L+ ++ ++E N HV V GE+S + +SGH YF+LKD Sbjct: 1 MELFPEKR-----ILTVSQLTSLIRGVLEENFEHVWVEGEVSNL-AMPASGHLYFTLKDA 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++I ++++ + ++F P +G+ +V G+IT + YQ ++E L P G G L A Sbjct: 55 GAQIRCVMFRASARALKFRPRDGMGLIVRGRITVYEQRGDYQFLVEYLEPRGVGALQLAF 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 + K+KL +EGLF+++HK PIP +P+ I V+TS TGA I DIL ++ RF + V+I PV Sbjct: 115 IQLKEKLAKEGLFAEEHKRPIPSLPQRIGVVTSATGAAIHDILNVLNRRFANVEVLIRPV 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG+ EIA AI+ N D++I+ RGGGS+EDLW FN+E + RA+ S Sbjct: 175 KVQGEGAADEIAEAIIDFNR------YGAVDVMIVGRGGGSLEDLWAFNEEKVARAVHRS 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPIISA+GHE D+T+AD+ ADLRAPTP+ AAE+ V KE L S + L RL + R+ Sbjct: 229 RIPIISAVGHEIDFTIADFVADLRAPTPSAAAELVVKSKEELASKVEFLRHRLIQTLRRI 288 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L SL +AL + L RLD + LE + + + R + N ++ Sbjct: 289 LADAGGELESLSRALRDPTVLLGHLSQRLDDIFVRLERAIAGDLKDRGRMLEALKNHLRL 348 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 +++ R+ ++ E + +H + Sbjct: 349 RNPALKVERARERVIALSDKSEIALLRH-------------------------VDRYREA 383 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRN 478 R+ ++ + TL RGY+ + R Sbjct: 384 AAVHSARL----------------------ETLSPLGTLARGYSVALKLPERVPVKTFRQ 421 Query: 479 LATKTRILINFFDGQANAIVIN 500 LA K R+ + F G+A V + Sbjct: 422 LALKDRLELLFHHGRAWCRVES 443 >gi|220934209|ref|YP_002513108.1| Exodeoxyribonuclease VII [Thioalkalivibrio sp. HL-EbGR7] gi|259646300|sp|B8GP32|EX7L_THISH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|219995519|gb|ACL72121.1| Exodeoxyribonuclease VII [Thioalkalivibrio sp. HL-EbGR7] Length = 447 Score = 342 bits (877), Expect = 9e-92, Method: Composition-based stats. Identities = 133/492 (27%), Positives = 231/492 (46%), Gaps = 57/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 D ++V+ L+ ++ ++E + V GE+S +SGH YF+LKD+ +++ ++ Sbjct: 4 TDRDIFTVTRLNQAVQGLLEGTFPLIWVEGELSSV-SRPASGHLYFTLKDSGAQVRCALF 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + + F P +G++ LV ++ + YQ+I+E + +G G L A E+ K++L Sbjct: 63 RNRAQLMRFRPADGMQVLVRARVGLYAPRGDYQLIVEHMEEAGDGALRRAFEELKQRLER 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF + K P+P P+ + VITSPTGA IRDIL + RFP L +I+PV VQG Sbjct: 123 EGLFDAERKRPLPRFPRRLGVITSPTGAAIRDILSVLRRRFPGLPALIYPVPVQGAAAAP 182 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA A+ + K+ D++ILARGGGS+EDLW FN+E++ RAI + IP++S +G Sbjct: 183 AIAEALRTASARKD------CDVLILARGGGSLEDLWAFNEEIVARAIHDCEIPVVSGVG 236 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD AADLRA TP+ AAE+ P+++ + L + R ++++ L+ Sbjct: 237 HEVDVTIADLAADLRAATPSAAAELVSPLRDEWLLHVERQRRLLVERMQRGLQHQALKLD 296 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 +L + L + ++ L R+D L R L ++ + + + +R++ + Sbjct: 297 NLERRLRQQHPERRLQNQAQRVDELERRLALAMQHRLRHRESRLARLQDRLQHRSPARAL 356 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + + + Sbjct: 357 ERLEAREAQLRLRL---------------------------------------------- 370 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + L ++ ++ R L S + TL RGY+ + I + R+ Sbjct: 371 -DSALRRRLDRFEARLAAAGRALHSVSPLATLGRGYSILTTAEGQVIRDASQVQVNDRVE 429 Query: 487 INFFDGQANAIV 498 G+ + V Sbjct: 430 ARLGKGRLSCTV 441 >gi|94967310|ref|YP_589358.1| exodeoxyribonuclease VII large subunit [Candidatus Koribacter versatilis Ellin345] gi|124007142|sp|Q1IV16|EX7L_ACIBL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|94549360|gb|ABF39284.1| Exodeoxyribonuclease VII large subunit [Candidatus Koribacter versatilis Ellin345] Length = 455 Score = 342 bits (877), Expect = 1e-91, Method: Composition-based stats. Identities = 142/487 (29%), Positives = 227/487 (46%), Gaps = 53/487 (10%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + V ++ ++ +E + V V GEIS +R SGH YFSLKD +++ ++++ Sbjct: 18 IWQVRDIVSAVRAALEREYADVWVEGEISNFR-PADSGHLYFSLKDESTQLRIVMFRSQA 76 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F PE G++ + GK+T + G + Q++ E L P G+G L A E+ K KL EGLF Sbjct: 77 RLLKFRPENGLKVIARGKVTLYEGRGELQLMAEYLEPQGAGALQIAFEQLKAKLQAEGLF 136 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K PIP +PK I V+TSP GAVI+DIL + R + V+IFP +VQG+ E+A+ Sbjct: 137 ARERKKPIPALPKKIGVVTSPRGAVIQDILNVLRRRHNSVHVLIFPAQVQGETAASEVAS 196 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + N ++II+ARGGGSIEDL FNDE + R+IA S+IP+ISA+GHETD Sbjct: 197 GVRYFNKAA------NVEVIIVARGGGSIEDLAAFNDEGLARSIATSTIPVISAVGHETD 250 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+ D+ ADLRAPTP+ AAE+ + K Sbjct: 251 FTICDFVADLRAPTPSAAAELVIRSK---------------------------------- 276 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 RL L L L + + + + + + I + +Q Sbjct: 277 ---------QEVDERLTALSTHLARALRVRLLEYEKKLDRLARHGAFGGMQTAIARRQQR 327 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + R L ++ +A + ++R H + + ++ L Sbjct: 328 VDDLAFRLSVAQTNVFRQ--LHRRLDVASTRVRHHDLRSRFAAEHRELSARVEKLAATLR 385 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + T + LQ + + L+RGY + D + R + I G Sbjct: 386 ANLMRRRTRIERLAGQLQGLSPISILERGYALVFDAEGRLLKDARQVREGNTIRAQLALG 445 Query: 493 QANAIVI 499 Q +A+V Sbjct: 446 QISAVVK 452 >gi|78043300|ref|YP_360809.1| exodeoxyribonuclease VII large subunit [Carboxydothermus hydrogenoformans Z-2901] gi|123743154|sp|Q3AAM5|EX7L_CARHZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|77995415|gb|ABB14314.1| exodeoxyribonuclease VII, large subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 472 Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats. Identities = 132/491 (26%), Positives = 229/491 (46%), Gaps = 39/491 (7%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSEL+ ++ E + L+ V V GE+S + S GH YF+LKD + + +++KG Sbjct: 7 TVSELTDYIAEKFEKDDWLNQVAVEGELSNCKF--SQGHLYFTLKDERAELKGVMYKGRA 64 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + + F+P++G + +V G++ + YQI E + P G G L E+ K+KL ++G F Sbjct: 65 SALPFIPQDGQKVIVFGQVAVYKKRGIYQIYAEMIEPLGIGALYLKFEQTKEKLRDKGYF 124 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +++ K +P P+ I ++TS GA IRDIL I R+P + + PV VQGDE P +I Sbjct: 125 AEERKKKLPRYPEKIGIVTSKNGAAIRDILTTIKKRWPKATLYLVPVAVQGDEAPGQIVK 184 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ LN ++IILARGGGS E+L FN+E + AI S+IP+++ IGHETD Sbjct: 185 ALNLLNR------YKLCEVIILARGGGSFEELAAFNEETVADAIYASNIPVVTGIGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL-L 311 ++AD AD RAPTPTGAA A P + ++L ++ + + + L Sbjct: 239 TSIADMVADRRAPTPTGAAVEATPNLVEIWNNLREQRQKMVKALANYFQREQKNLEFQER 298 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 + L ++ ++ + L + + ++ + + ++ ++ ++ Sbjct: 299 RILRAYEKLITDKSREVTEGLERLLRSFKTTFQQEKNRLSLLKEKLILLSPYLRHKQQKE 358 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E ++ + + + + + R+ + Sbjct: 359 KLEELKERL-------------------------FLRCAELLKRNQAVLIQQSLRLRTSV 393 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + + + +S L+ L RGY + D +T NL R I F D Sbjct: 394 KNLVLQKNLVLSSYEERLKLLNPLKILNRGYAVVFDFEGRVVTSVNNLP--ERFKIKFSD 451 Query: 492 GQANAIVINKA 502 G+A A + K Sbjct: 452 GEALAKALGKN 462 >gi|317484632|ref|ZP_07943535.1| exonuclease VII [Bilophila wadsworthia 3_1_6] gi|316924106|gb|EFV45289.1| exonuclease VII [Bilophila wadsworthia 3_1_6] Length = 490 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 141/516 (27%), Positives = 228/516 (44%), Gaps = 54/516 (10%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V +L+ +K VES +V VRGE++ SSGH YFSLKD ++ + A+ +KG+ Sbjct: 3 ILTVRQLTAQIKDAVESGFPYVWVRGEVTNV-SRPSSGHIYFSLKDENALLQAVWFKGSQ 61 Query: 74 N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 + G + + G++T + YQ+++E SG G Sbjct: 62 KERETFDPLTGEVFEDGPRTSLAGTLRNGQQIICAGRLTVYAPRGGYQLVVELAQDSGEG 121 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLR 173 L ALE K+KL E+G FS + K PIP P +AVIT+P+GA IRD L+ R Sbjct: 122 QLHLALEALKRKLAEKGYFSLERKRPIPEHPHRVAVITAPSGAAIRDFLRLSGERGTGCE 181 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 + I PV VQGD+ P IA A+ N D+++L RGGGS++DLW FNDE + Sbjct: 182 IRIHPVPVQGDDAPPRIAEALDDENRRGWA------DVLVLIRGGGSLQDLWAFNDERVA 235 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 A+ S IP+++ IGHE D ++AD ADLRA TP+ AA + P ++ + +LEA L Sbjct: 236 DAVYRSRIPVVAGIGHEVDTSIADMVADLRAATPSHAALLLWPERQWYAQLVDDLEANLL 295 Query: 294 NIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 R + L++L +AL + ++ L+ R L R L+ LE + R Sbjct: 296 EAAERRLSQADQRLDTLGRALAWLSPERGLARLEERFGTLARRLDFALEQKLERTDARLR 355 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + + + + + Q Sbjct: 356 FLEAGMSRYAESRVLDTRLEQTAALTRRLRQAQAL------------------------- 390 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 R+ + + +R+E + + + + L+ + L+RGY + + Sbjct: 391 RLEQIGGRLDTASSRLEERFARQFEGLERQLERHDLRLRGLDPEGPLERGYAYAFTADGH 450 Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 F+ R++ + + DG+A+ V E Sbjct: 451 FVRSIRDVQPGASLTVKIRDGEADTRVTAVRATGES 486 >gi|317128427|ref|YP_004094709.1| exodeoxyribonuclease VII large subunit [Bacillus cellulosilyticus DSM 2522] gi|315473375|gb|ADU29978.1| exodeoxyribonuclease VII, large subunit [Bacillus cellulosilyticus DSM 2522] Length = 460 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 162/498 (32%), Positives = 249/498 (50%), Gaps = 59/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +D SVS+++ +K +VE++ L +V +R EIS ++ HS GH YF+LKD+ SRI+++ Sbjct: 1 MDQEFLSVSDVTRRIKRLVETDAVLQNVWLRAEISNFK-WHSRGHMYFTLKDDKSRINSV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G ++F PE G+ LV G I+ + +YQ+ ++ + P G G L A E+ KKKL Sbjct: 60 MFAGNNRYLKFTPENGMNVLVRGDISVYEPHGQYQLYVKEMQPDGIGNLYLAYEELKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 G FS + K IP PK IAV TSPTGA +RDIL + RFPL +VI+ PV VQG E Sbjct: 120 EMAGYFSRERKKAIPTFPKTIAVATSPTGAAVRDILTTVHRRFPLTKVILLPVLVQGPEA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 IA AI Q N D++I+ RGGGS+E+LW FN++++ AI S IPIISA Sbjct: 180 APSIARAIKQAN------FAGIFDVMIIGRGGGSLEELWAFNEQIVAEAIYESKIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T++D+ ADLRAPTPT AAE+AVP L + + +RL + RL + Sbjct: 234 VGHETDVTISDFVADLRAPTPTAAAELAVPHIHELLKRVQDQRSRLIQTMDRLKSVQRER 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ + + LDRL + + + + ++ + RI+ H Sbjct: 294 LGHLSKSYAFKYPKRLIEQKEQDLDRLVELMTKTMMLNVDKQKDKLQGLKGRIQRMHPTH 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + R+ I + ++ + Sbjct: 354 KLLQERKRISDAIVNLRR------------------------------------------ 371 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ I S + S++ L+ + +KRGY + NN I + ++ Sbjct: 372 -----AMNETINSKQSRFSLSLSKLELLSPLQMMKRGYNLAYNEENNLIKKLEDVKENEP 426 Query: 485 ILINFFDGQANAIVINKA 502 I I DG+ + V K+ Sbjct: 427 ISIRLQDGKLSCHVTEKS 444 >gi|116051802|ref|YP_789356.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa UCBPP-PA14] gi|122260948|sp|Q02RT0|EX7L_PSEAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|115587023|gb|ABJ13038.1| exodeoxyribonuclease VII large subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 459 Score = 341 bits (875), Expect = 2e-91, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 227/500 (45%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ LD +VS+L+ + ++E V V GE+S +SGH YF+LKD++ Sbjct: 4 DPF-QRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNL-ARPASGHVYFTLKDSN 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I +++ ++ +G+ V GKI+ F G YQ+I +++ P+G G L A E Sbjct: 62 AQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLF+ + K P+P P+ I +++SP+GAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+A + Sbjct: 182 VQGREAVAQIVRALQLADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACA 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L L RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L + + L + + L RLD L L E + ++ + R+ + Sbjct: 295 LRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERHLAVRHERLVRLETRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + ++ L+ Sbjct: 355 HPGRTLALLRQKLDSLAARLPRAAREVLKDRRQH-------------------------- 388 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + L + TL RGY+ + D I Sbjct: 389 ---------------------LEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQ 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 PGQRLKARLAEGELEVRVED 447 >gi|314933697|ref|ZP_07841062.1| exodeoxyribonuclease VII, large subunit [Staphylococcus caprae C87] gi|313653847|gb|EFS17604.1| exodeoxyribonuclease VII, large subunit [Staphylococcus caprae C87] Length = 445 Score = 341 bits (875), Expect = 2e-91, Method: Composition-based stats. Identities = 144/492 (29%), Positives = 243/492 (49%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG Sbjct: 5 LSVTTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLLEARVSVYVRRGNYQIYVNKMQLDGIGNLYQKLEELKKKLTKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F K PIP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FDSSVKKPIPKFPKRIAVLTASTGAAIRDIHSTINSRYPLVEQIHISTLVQGTQAKQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I +TL D II+ RGGGSIEDLW+FN+E +V+AI + + PIISA+GHET Sbjct: 184 EKIEHADTL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIYSCNTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + + L I + ++ + L+ L Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELMQQIKQYQFSLTRFIKQYVEQQKKQLSHLN 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L ++L+ + + + ++ + L +NI ++ Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLKQLMSTYLEKHTQNLKLLKQHFNLKTLNNNISQD 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + H+ + ++ + Q + +++++ Sbjct: 357 KMHVSQYRERMTQAITNE------------------------------------LSKLQT 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L +KI++ L + + NT+ RGY + + ++ +T ++ I + Sbjct: 381 DLKNKIEN-----------LNNLSPTNTMLRGYAIV-NKDDKVVTSTHDITENDTITLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGNVDATVKKV 440 >gi|169350500|ref|ZP_02867438.1| hypothetical protein CLOSPI_01268 [Clostridium spiroforme DSM 1552] gi|169292820|gb|EDS74953.1| hypothetical protein CLOSPI_01268 [Clostridium spiroforme DSM 1552] Length = 438 Score = 341 bits (875), Expect = 2e-91, Method: Composition-based stats. Identities = 142/494 (28%), Positives = 233/494 (47%), Gaps = 62/494 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +VS L+ +LK ++S+ L + ++GE+S ++ HSSGH YF+LKD SRI+A+ Sbjct: 1 MEKRYLTVSALNRYLKAKIDSDEQLQKILIKGEVSNFKH-HSSGHLYFTLKDETSRINAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ K+ F E G++ L+ ++ + + YQ+ ++++ G G L E+ KK L Sbjct: 60 MFASKARKLPFELENGMKVLIQASVSVYDVAGTYQLYVDNIEQDGLGNLYLRYEQLKKTL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF +HK IP P IAV+++ A + DI++ I RFP +RVI+FP+ VQG Sbjct: 120 ALEGLFDQEHKQEIPKFPSKIAVLSAYPSAALADIVRTIKLRFPVVRVIVFPIPVQGKGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I + +++L + II+ARGGGS+EDLW+FN+E + RAI N PIIS Sbjct: 180 YLHIIKTLNYVDSL-------GFNTIIIARGGGSLEDLWNFNEEALARAIYNCKTPIISG 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T+ D+ AD R TPT A A P L+ ++ N+ LN ++ + I Sbjct: 233 VGHEIDYTICDFVADYRCATPTAAGIKATPDLVELKQNVNNINYTLNTLMKQKITLNKQM 292 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN L N ++ + ++D L L+ + Sbjct: 293 LNKLNSFYLFKNPNKLFEDKKVKIDYLSERLKDIFTYNLN-------------------- 332 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ Q LE+K + +++ EQ Sbjct: 333 -------FQSNNAKNLIQTFNHQANLFTLEQKNHLNLINQTMEQ---------------- 369 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ KIK + T L + + L+RG+ + +N +T L T + Sbjct: 370 -----LMKQKIKYEKEKLYYTLSKLNTLSPLKVLERGFAIVLKEDNVVLT-ANELKTGDK 423 Query: 485 ILINFFDGQANAIV 498 I I DG NAI+ Sbjct: 424 IKIKMKDGSKNAII 437 >gi|189184650|ref|YP_001938435.1| exodeoxyribonuclease VII large subunit [Orientia tsutsugamushi str. Ikeda] gi|189181421|dbj|BAG41201.1| exodeoxyribonuclease large subunit [Orientia tsutsugamushi str. Ikeda] Length = 456 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 160/490 (32%), Positives = 259/490 (52%), Gaps = 52/490 (10%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + EY+V ELS H+K +E + VRGE+SG + I SS H+YF+LKD+ + ++ + WK Sbjct: 19 NAKEYTVHELSLHIKSAIEYQFGVLKVRGEVSGLK-IASSCHSYFNLKDDKAVLNCVCWK 77 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 TLN ++ E+GIE + G++TT+ G S+YQ+++E++ +G G+L+ +RK+KL++E Sbjct: 78 TTLNLVKIKVEDGIEVIATGRLTTYSGQSRYQLVVENICIAGLGSLMQIFFQRKEKLMKE 137 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF + K +P P +I VITS +GAVIRDI R++ RFP +++++PV VQG+ E+ Sbjct: 138 GLFDNSRKKKLPAFPMVIGVITSISGAVIRDIAHRVNDRFPSKLLVWPVTVQGNNSANEV 197 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+AI + N + P++II+ARGGGS+EDLW FN+E++VRAIA+S IPI+SAIGHE Sbjct: 198 ASAIQECNNMLTSNNDLAPEVIIIARGGGSVEDLWSFNEEIVVRAIASSVIPIVSAIGHE 257 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+TLAD+AADLRAPTP+ AAEM VPV ++ L N ++N++ +K + +LN+ Sbjct: 258 VDFTLADFAADLRAPTPSAAAEMVVPVLADIKMRLNNSMNQINHVTFNYLKCSVMSLNNC 317 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + + D L Sbjct: 318 GNIVQKLKTMIDLNYQKFDELVF-------------------------------RFDTKV 346 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + E Q+ I Q + + + ++ L ++ + Sbjct: 347 EQFGELQKRILQ--------------------NNVLIDPSKLVQLYALKLENLNNKLYQL 386 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + V + +L + Y LKRG+ I+ + ++ L +I I Sbjct: 387 VKRLFVNLDNKVYLLDSLLNNMDYSRVLKRGFAIIRLVDGPVVSSLSQLKGNDKIKIQLQ 446 Query: 491 DGQANAIVIN 500 DG A + + Sbjct: 447 DGVRQATIDS 456 >gi|58582360|ref|YP_201376.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426954|gb|AAW75991.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv. oryzae KACC10331] Length = 504 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 127/492 (25%), Positives = 220/492 (44%), Gaps = 60/492 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 64 NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 122 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A + + +L E Sbjct: 123 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 182 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 183 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 242 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 243 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 296 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 297 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 356 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R + + R + + R++ Sbjct: 357 LALRLRAHSPQARLQLLHRRQEE-------AGRQLGARMTQVLERLQARVQRGHAQVQSH 409 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++H+ QQ + + Q Sbjct: 410 NPQRHLAGLQQRLRALHPQ----------------------------------------- 428 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486 + +++ + R L++ T+ RGY + + + + +A R+ Sbjct: 429 -AAMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLR 487 Query: 487 INFFDGQANAIV 498 DG V Sbjct: 488 AQLADGSIEVRV 499 >gi|295425231|ref|ZP_06817934.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylolyticus DSM 11664] gi|295065007|gb|EFG55912.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylolyticus DSM 11664] Length = 452 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 138/502 (27%), Positives = 239/502 (47%), Gaps = 58/502 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 D+ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 ADNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V G ++ + YQ ES+ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAESMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ +HK +P P IAV+TS +GAVI DI+ + RFP + +FP +VQGD Sbjct: 121 AKEGLFNPEHKKQLPHFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS+ Sbjct: 181 ADSLVVAMQQILQHADD-----YDVMIIGRGGGSLEDLWPFNEEKVVRQVYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305 +GHETD TL D AD+RA TPT AAE A P +++ L+ RL + +I+ K + Sbjct: 236 VGHETDTTLCDLVADVRAATPTAAAEYATPNLTDEIANIHQLQGRLLASVQAIIREKRDI 295 Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + + + +D L + L +++ + R Sbjct: 296 LQRINNSVIMREPTRLYDQQIQTVDMLKQRLANSMNNKLER------------------- 336 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 RQ Q ++ +I + L Sbjct: 337 ----ARQQFNLAAQRLQS------------------------NSPDKQIIQMQQQRIFLA 368 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ + ++ + T + L ++ TL+RG+T + + ++ + Sbjct: 369 KRLIDNMKKQLLLKRDAFKQTVQQLNDYSPLKTLERGFTYTTNESGQTVSSVDQIRNNDH 428 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + ++F DG A AIV K+ Sbjct: 429 LKLHFKDGIAEAIVTAIRGDKD 450 >gi|302039002|ref|YP_003799324.1| exodeoxyribonuclease VII large subunit [Candidatus Nitrospira defluvii] gi|300607066|emb|CBK43399.1| Exodeoxyribonuclease VII, large subunit [Candidatus Nitrospira defluvii] Length = 452 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 232/494 (46%), Gaps = 56/494 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVS+++ ++ +E+ + + GEI+ R SSGH YF+LKD S++ ++++ + Sbjct: 13 SVSDVTRLIRDSLEAQFRDIWIEGEITNLRA-PSSGHLYFTLKDEQSQLRGVLFRSGALR 71 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F +EG+ + G+I+ + +YQ+I++SL P G G A E+ K++L EGLF D Sbjct: 72 LRFALQEGLTIVARGRISVYEPRGEYQLIVDSLEPKGVGAFQLAFEQLKERLAREGLFDD 131 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194 K P+P P+ + V+TS TGA +RDI+ + R P+ ++I PV VQG+ + IA+AI Sbjct: 132 ARKRPLPPFPRTVGVVTSRTGAAVRDIVAVLRRRCPVANILIAPVPVQGEGAAERIADAI 191 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 L+ P+ +++I+ RGGG+ EDLW FN+E++VRAI S +P++SA+GHE D T Sbjct: 192 TTLS------GMPQVEVMIVGRGGGASEDLWAFNEEVVVRAIVQSKVPVVSAVGHEIDVT 245 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 LAD+AAD RAPTP+ AAE VPV + + L RL+ I+ L++ + + + + Sbjct: 246 LADFAADYRAPTPSAAAEAVVPVLDEIVERLGETSNRLDRIVRTLLEMQRHRFERSVGVM 305 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + RLD L L L + +R + + + IQ I Sbjct: 306 REMRFRVQAHAQRLDELRDGLTRTLTERLTLLHRGMVERQHALLAQGPHRRIQTALVVIP 365 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + +EQ Sbjct: 366 QLYKRLEQET-----------------------------------------------RRG 378 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQ 493 + S +V+ L + + L RGY+ IQ + + +A + +G+ Sbjct: 379 LMSRRQAVASYMMALDALSPLAILSRGYSVIQAIPSGRIVRLASEVAVGDVVQARLAEGR 438 Query: 494 ANAIVINKAPPKEQ 507 V PP Sbjct: 439 LLCRVNEVLPPSMP 452 >gi|300811682|ref|ZP_07092158.1| exodeoxyribonuclease VII, large subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497383|gb|EFK32429.1| exodeoxyribonuclease VII, large subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 456 Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats. Identities = 144/507 (28%), Positives = 250/507 (49%), Gaps = 58/507 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 D +VSEL++++K + + L + ++GE+S +R GH YFSLKD+ Sbjct: 1 MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 S+I+ ++++G +K++F PEEG++ V G+++T+ YQ +S+ P+G G L Sbjct: 60 SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++KL +EGLF+ +HK P+P P IAV+TS +GAVI DI+ + RFP + +FP + Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+IS++GHETD TL D AAD RA TPT AAEMA P + + + L+ RL I +I Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALTLVLAEIGQLQTRLLTDIRAVI 294 Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L + + ++D+L ++L +E+I+ + + + + R++ Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSILTQRLQ 354 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 I++ +Q + +E +K+ L ++ Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L ++ TL RGY+ D + N + + Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427 Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505 LA ++ ++ DGQA + K Sbjct: 428 LAPGDQVRLHLKDGQAIGRIEEIKEEK 454 >gi|88813482|ref|ZP_01128717.1| Exodeoxyribonuclease VII [Nitrococcus mobilis Nb-231] gi|88789272|gb|EAR20404.1| Exodeoxyribonuclease VII [Nitrococcus mobilis Nb-231] Length = 477 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 138/501 (27%), Positives = 232/501 (46%), Gaps = 58/501 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P + Y+VS L+ ++ ++E L + V GEIS SGH YF+LKD Sbjct: 10 EPHPLSHETRRDVYTVSRLNQEVRLLLEHALPLLWVEGEISNL-SQPRSGHLYFTLKDEA 68 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + F P++ + L +I+ + +Q+IIE + +G G L A E Sbjct: 69 AQVRCAMFRNRSLYLRFRPKDSLHVLARARISLYAPRGDFQLIIEHMEEAGDGALRRAFE 128 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K +L +EGLF+ +HK P+P +P+ I V+TSP+GA +RD+L + RFP +RV+I+PV Sbjct: 129 ALKNRLAQEGLFAAEHKKPLPALPRRIGVVTSPSGAALRDVLSVLRRRFPAIRVLIYPVA 188 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG P EI I +E D ++L RGGGS+EDLW FN+E + RAI Sbjct: 189 VQGANAPGEITATIRLAARRRE------VDALLLTRGGGSLEDLWAFNEEAVARAIHECP 242 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +PI+SA+GHETD T+AD+ AD RAPTP+ AAE+ P + + +L RL + R + Sbjct: 243 LPIVSAVGHETDTTIADFVADQRAPTPSAAAELLSPDGPGWLTRIDHLAERLRQGLRRGL 302 Query: 301 KYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + + L L + L + + L RLD L + + H+ +R+ Sbjct: 303 ERQRHGLGRLERRLANQHPGRRLQERAQRLDELEQRMTRAERGRRRELTTRHGHLADRLH 362 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 +++ + I ++ + Sbjct: 363 RQDPRCRVRERLEQIAALRRRLHA------------------------------------ 386 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKR 477 L + S ++ T R L++ + TL RGY ++ +++ + + Sbjct: 387 -----------ALGQDLGSRRQLLAATVRALEAVSPLKTLGRGYAIVRRQRDDHIVRRPS 435 Query: 478 NLATKTRILINFFDGQANAIV 498 + R+ + G+ V Sbjct: 436 EVTPGERVSARLYSGELVCRV 456 >gi|319787573|ref|YP_004147048.1| exodeoxyribonuclease VII large subunit [Pseudoxanthomonas suwonensis 11-1] gi|317466085|gb|ADV27817.1| exodeoxyribonuclease VII, large subunit [Pseudoxanthomonas suwonensis 11-1] Length = 451 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 141/509 (27%), Positives = 231/509 (45%), Gaps = 61/509 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 ++NS + ++L+ + ++ES V V GE+ +SGH YF+LKD ++ Sbjct: 1 MPEQNS----ILTPAQLNTLARDLLESAFPLVWVEGELGNVT-RPASGHLYFNLKDARAQ 55 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + ++K ++F P EG++ L G++T + YQ++++ + +G G L A E Sbjct: 56 VRCAMFKPKSQWLKFAPREGLKVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAYEAL 115 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K +L EGLF K P+P + +AVITSPTGA +RD+L +S R P L V I P VQ Sbjct: 116 KARLEAEGLFDPARKRPLPAWVRRVAVITSPTGAAVRDVLSVLSRRCPLLDVEILPSLVQ 175 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 GD +I + L+ R D I+LARGGGS+EDLW FNDE + RAIA+S +P Sbjct: 176 GDTAAPQI------TSLLQRAGASGRYDAILLARGGGSLEDLWAFNDERLARAIADSPVP 229 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SA+GHETD+TLAD+AAD+RAPTP+ AAE+ VP + L + + +L RL+ ++ Sbjct: 230 VVSAVGHETDFTLADFAADVRAPTPSVAAELLVPDRRDLLARIGSLHGRLHGTQGHRLRQ 289 Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L + L R + L R LE + + + H +++ Sbjct: 290 AMQRADRAALRLQAQSPRNRLRLLGQRQEALRRRLETRWREQLQQHHARVRHAGAVLRAH 349 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + R+ + + + + + L+ L Sbjct: 350 HPQRQLARLRERLQRLRARPQAAIARVLQRDAL--------------------------- 382 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + R L++ + T+ RGY+ + + +A Sbjct: 383 --------------------KLRALARSLEACSPLATVARGYSIVTTAEGALVHSTAQVA 422 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQPT 509 R+ DG V + P Sbjct: 423 AGDRVQARLRDGSVVLSVQSVRPDPPPQP 451 >gi|71281697|ref|YP_270894.1| exodeoxyribonuclease VII large subunit [Colwellia psychrerythraea 34H] gi|71147437|gb|AAZ27910.1| exodeoxyribonuclease VII, large subunit [Colwellia psychrerythraea 34H] Length = 444 Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats. Identities = 143/493 (29%), Positives = 230/493 (46%), Gaps = 61/493 (12%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +SEL+ ++ I+ES L+ V + GE+S + SSGH Y SLKD S++ ++KG+ Sbjct: 6 ILQISELTKKVRFILESELNTVWLTGEVSNFIA-ASSGHWYLSLKDAKSQVKCAMFKGSN 64 Query: 74 NKIEFL----PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 ++ P G + LV K++ + +Q+IIE + +G+G L E+ K KL Sbjct: 65 RRVRLSTGAAPSNGQQVLVRAKVSLYEPRGDFQLIIEHMEDAGTGLLRQQYEQLKNKLNN 124 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G+F K +P + ++TSPTGA ++DIL + R P ++ II+P VQG+ Sbjct: 125 QGIFDLSRKQQLPKNISCVGIVTSPTGAAVKDILTVLKRRNPNIKAIIYPSLVQGEYAQG 184 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I +AI N+ E D++I+ RGGGS+EDLW FN+E +V AI S++PIISA+G Sbjct: 185 DICHAIESANSRNE------CDVLIVGRGGGSLEDLWPFNEESVVHAIYKSALPIISAVG 238 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D TL+DY ADLRAPTP+ AAE+ L + L+ + RL + Y N + Sbjct: 239 HEIDTTLSDYVADLRAPTPSAAAELVSSDSSELLNQLLMFKQRLIKAQQNKLVYLGNEQS 298 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + +Q L + + D L L+ ++ I + + R+ + I Sbjct: 299 YLQHRLSQVHPEQQLQLQQQKADELSLRLKQAMKRNIEQVQSKPIQLSQRLLQQSPLKTI 358 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q +Q I + I Q ++ Sbjct: 359 QLQQQKIDQNAHRITQAMQ----------------------------------------- 377 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ LQ + T+ RGY+ +++ N I++ + I Sbjct: 378 ------NSLQHNSEKFVHLIEQLQLVSPLATIARGYSVTRNSKNEVISKTAQVKIDEEIS 431 Query: 487 INFFDGQANAIVI 499 + DG NA VI Sbjct: 432 VQLSDGHINARVI 444 >gi|167756947|ref|ZP_02429074.1| hypothetical protein CLORAM_02496 [Clostridium ramosum DSM 1402] gi|237734650|ref|ZP_04565131.1| exodeoxyribonuclease large subunit [Mollicutes bacterium D7] gi|167703122|gb|EDS17701.1| hypothetical protein CLORAM_02496 [Clostridium ramosum DSM 1402] gi|229382470|gb|EEO32561.1| exodeoxyribonuclease large subunit [Coprobacillus sp. D7] Length = 438 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 128/492 (26%), Positives = 225/492 (45%), Gaps = 58/492 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +VS L+ +LK ++S+ L + ++GE+S ++ HSSGH YF+LKD HSRI+A+ Sbjct: 1 MEKRYLTVSALNRYLKAKIDSDSQLQRILIKGEVSNFKH-HSSGHFYFTLKDEHSRINAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ +K+ F G++ LV ++ + + YQ+ ++++ G G L E+ KK+L Sbjct: 60 MFSSKASKVPFDLTNGMKVLVQASVSVYDVAGTYQLYVDTIEQDGLGNLFLKYEQLKKQL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ ++K IP P IAV+++ A + DI++ I RFP +RVI+FP+ VQG + Sbjct: 120 ASEGLFNPENKLVIPKFPSKIAVLSAYPSAALADIIRTIHLRFPVVRVIVFPIPVQGKDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI + ++TL II+ARGGGS+EDLW+FN+E + RAI PIIS Sbjct: 180 YLEIIRTLRYVDTL-------GFSEIIIARGGGSLEDLWNFNEEGLARAIYQCKTPIISG 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T+ D+ AD RA TPT AA A P Sbjct: 233 VGHEVDFTICDFVADYRAATPTAAAIKATPD----------------------------- 263 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + +D + L + ++ I + N + + Sbjct: 264 --------------LFELQQAVDNIKYTLNNLMKQKIILNKENLNRLKSFYLFKNPQKMF 309 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + I + + + ++ + ++ Q + + Sbjct: 310 EDKTAKIDYLYDQLNNVF---NHDLIEKQNKASNLIQTFNHQANLFTLNQRNRLDTINRT 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + K++ + L + + TL+RGY + + + I+ +L + +I Sbjct: 367 MSLEIKRKLQHNQEKFYYSLSKLNTLSPLKTLERGYAIVLKED-HVISSVDDLNSGDKIE 425 Query: 487 INFFDGQANAIV 498 + +G AI+ Sbjct: 426 LKLHNGIKKAII 437 >gi|104783367|ref|YP_609865.1| exodeoxyribonuclease VII large subunit [Pseudomonas entomophila L48] gi|123079094|sp|Q1I5K4|EX7L_PSEE4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|95112354|emb|CAK17081.1| exonuclease VII, large subunit [Pseudomonas entomophila L48] Length = 459 Score = 340 bits (873), Expect = 3e-91, Method: Composition-based stats. Identities = 142/500 (28%), Positives = 234/500 (46%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF ++ LD +VS+L+ + ++E V V GEIS +SGH YF+LKD+ Sbjct: 4 DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I +++ ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 62 AQIRCALFRQNALRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +ITSPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLGAEGLFSTERKRPLPAHPQRIGIITSPTGAVIRDIISVFRRRAPQVELNLIPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 182 VQGREAINQIVRALQMADRQ-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P LQ L +L+ RL + + Sbjct: 235 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLQQRLDSLQRRLLLRMQSRL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L + L + + L RLD L L + + +++ + R+ + Sbjct: 295 AHDRLRVEGLARRLRHPGERLRQQAQRLDDLDMRLRRAFALNMNQRHERLGRLDTRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 +++ +Q + + + + ++ Sbjct: 355 HPGRSLKLLKQRLDSLAERLPKAMR----------------------------------- 379 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L R + + LQ + TL RGY+ + D + I Sbjct: 380 DVLKDRRQR------------FQAQLQTLQVVSPLATLARGYSILLDEHGQAIRSAAQTH 427 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ +G+ V + Sbjct: 428 NGQRLTARLNEGELKVRVED 447 >gi|329910418|ref|ZP_08275303.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium IMCC9480] gi|327546186|gb|EGF31232.1| Exodeoxyribonuclease VII large subunit [Oxalobacteraceae bacterium IMCC9480] Length = 454 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 131/507 (25%), Positives = 221/507 (43%), Gaps = 57/507 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + ++ P +VS L+ + ++E N + V GE+S + +SGH YFSLKD Sbjct: 4 DHLFEQPDTASPVLTVSALNQAVSRMLERNFPLMWVAGEVSNFT-RAASGHWYFSLKDAS 62 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ A++++G F+P+EG + V +T + +Q+ +E++ +G G L A Sbjct: 63 AQVRAVMFRGRAQYAGFIPKEGDKVEVRTLVTLYAARGDFQLSVEAIRRAGVGNLFEAFL 122 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K+KL EGLF K +P P+ I ++TS A +RD+L + R P +RVI++P Sbjct: 123 QLKQKLESEGLFDPARKRALPVFPRTIGIVTSLQAAALRDVLATLKRRTPHIRVILYPTP 182 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD ++IA AI + E D+++L RGGGSIEDLW FNDE + R IA + Sbjct: 183 VQGDGAAQKIAQAIATASYRAE------CDLLLLCRGGGSIEDLWSFNDETVARTIAACT 236 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+I+ IGHETD+T+AD+AADLRAPTPT AAE+A P + + + + L+ + R + Sbjct: 237 VPVIAGIGHETDFTIADFAADLRAPTPTAAAELAAPPRAEWIAHIEQVARNLSRMARRHV 296 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + R+ Sbjct: 297 TDRSQ-------------------------------------------GLDWLSRRLV-- 311 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I+ + + Q + R + + L + Sbjct: 312 SPAATIRHEQVLLAGWQVRLGNAT----RTPLNNARHALRHLRSQLTSQLPDTRPARWQL 367 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + R+ + + +S L+ + TL+RGY I D L Sbjct: 368 TEQRRRMASGIGSRTSRLRLQLSGLEAQLELLNPQRTLERGYAIIVDAEGRIARTPAQLH 427 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQ 507 + + + +G A + + P + Sbjct: 428 AREIVTVRLAEGSARIGIASVQPTLPE 454 >gi|166711792|ref|ZP_02242999.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv. oryzicola BLS256] Length = 445 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 129/492 (26%), Positives = 224/492 (45%), Gaps = 60/492 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A + + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVELLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R + R+L + ++ R H +++S Sbjct: 298 LALRLRAHSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQHGHAQVQSHNPQR--- 354 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 H+ QQ + + Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486 + + +++ + R L++ + T+ RGY + + + + +A R+ Sbjct: 369 QAAMQRRLQHDQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRSAAEVAAGERLR 428 Query: 487 INFFDGQANAIV 498 DG V Sbjct: 429 AQLADGSIEVRV 440 >gi|30249159|ref|NP_841229.1| exodeoxyribonuclease VII large subunit protein [Nitrosomonas europaea ATCC 19718] gi|81838736|sp|Q82VC2|EX7L_NITEU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|30180478|emb|CAD85083.1| xseA; exodeoxyribonuclease vII large subunit protein [Nitrosomonas europaea ATCC 19718] Length = 448 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 140/503 (27%), Positives = 230/503 (45%), Gaps = 60/503 (11%) Query: 4 FSQKNSLDHPE---YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 + N L P+ + VSEL+ + + I+E + V GEIS + SGH YFSLKD+ Sbjct: 1 MTDHNLLPEPKKILWRVSELNRNARVILEQTFPLLWVSGEISNLKRYP-SGHWYFSLKDD 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++++ ++++P+EG++ +T + ++Q+ +E L +G G L A Sbjct: 60 SAQVRCVMFRHKNLYLDWIPQEGMQVEAQALVTLYEARGEFQLTVEQLRRAGLGALFEAF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L +EGLFS ++K P+P P+ I +ITSP A +RD+L + R P + V+I+P Sbjct: 120 ERLKARLQQEGLFSPEYKQPLPRFPRQIGIITSPNTAALRDVLTTLQLRLPSIPVVIYPA 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ I A+ E D++IL RGGGSIEDLW FN+E++ RAIA Sbjct: 180 PVQGEGSAAAITTALHTAAVRGE------CDVLILCRGGGSIEDLWAFNEEIVARAIAAC 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IPI++ IGHETD+T+AD+ AD RAPTPTGAA++A P ++ + L RL + R Sbjct: 234 PIPIVTGIGHETDFTIADFVADARAPTPTGAAQLASPDRQAILHRLQYWLHRLQQTMERH 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 I+ ++ + L L + + + + L +L L++ + + RI S Sbjct: 294 IERRMQATDLLAHRLIHPGERIRHQQMHLLQLRGRLQNAWNRQVEIRTWRIEETGRRIHS 353 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 Q E +++ + Sbjct: 354 AKPDIQAGIRHQQ--ELAARLQRAMAH--------------------------------- 378 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 R+E L K++ + K L RGY+ + + R Sbjct: 379 ------RLE-NLQFKLRQQQQHLIH-------LDPKAVLARGYSIAYTARGDILHDSRQT 424 Query: 480 ATKTRILINFFDGQANAIVINKA 502 + + F G A A + Sbjct: 425 RAGDNVRLVFASGWAKADITETG 447 >gi|319944095|ref|ZP_08018373.1| exodeoxyribonuclease 7 large subunit [Lautropia mirabilis ATCC 51599] gi|319742589|gb|EFV94998.1| exodeoxyribonuclease 7 large subunit [Lautropia mirabilis ATCC 51599] Length = 479 Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats. Identities = 110/497 (22%), Positives = 211/497 (42%), Gaps = 37/497 (7%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S + +V +L+ +++ V V GE+S + +SGH YF+LK+ + Sbjct: 10 ASSQPFTGEQALTVGQLNRMAGRLLQDTFGTVRVVGELSNFT-RAASGHWYFTLKETGAA 68 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + A++++ + ++ F+P EG V+ ++T + +Q+ +E + +G+G + + Sbjct: 69 VRAVMFRMSAQRVGFVPREGDRVEVVARVTLYEARGDFQLGVERMQLAGAGNVWQRFARL 128 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K L EGLF K +P + VI+S A ++D+L + R P LRVII+P VQ Sbjct: 129 KTLLAAEGLFDPGRKQLLPPYIHTVGVISSLKAAALQDVLTTLRRRAPQLRVIIYPASVQ 188 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + P L ++ D+++L RGGGS EDL FNDE + R +A ++P Sbjct: 189 GQQAPA------ELLAAVEAAEARLECDVLLLVRGGGSFEDLDAFNDETLARRLARCTLP 242 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++S +GHE+D+T+ D+ AD+RAPTPT AAE+ + L + RL ++ R ++ Sbjct: 243 VVSGVGHESDFTICDFVADVRAPTPTAAAELVSTDRRESLQRLRHQRVRLQQVMQRQLER 302 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L+ + L + + L R + R++ Sbjct: 303 LEQRLDMAERLLRSPARQLQAHGQR----------------------LEQLAERLQRW-P 339 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + + + + + +++ + +E + + + + Sbjct: 340 LQELPRQEMRVERLAERLQRAMT----SRLVESQGRWQRAADTLRPPST--AAAGFRLAQ 393 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 R+ + + + L + L RGY ++D + + +T Sbjct: 394 AEQRLAHAARGCWQRAAARLEMAENSLALISPLAVLGRGYALVRDADGHLLTTVDEARPG 453 Query: 483 TRILINFFDGQANAIVI 499 ++ + DG A V Sbjct: 454 GQVEVRLQDGSLQATVD 470 >gi|325126075|gb|ADY85405.1| Exodeoxyribonuclease VII [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 456 Score = 340 bits (872), Expect = 4e-91, Method: Composition-based stats. Identities = 143/507 (28%), Positives = 249/507 (49%), Gaps = 58/507 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 D +VSEL++++K + + L + ++GE+S +R GH YFSLKD+ Sbjct: 1 MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 S+I+ ++++G +K++F PEEG++ V G+++T+ YQ +S+ P+G G L Sbjct: 60 SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++KL +EGLF+ +HK P+P P IAV+TS +GAVI DI+ + RFP + +FP + Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+IS++GHETD TL D AAD RA TPT AAEMA P + + + L+ RL I +I Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALPLVLAEIGQLQTRLLTDIRAVI 294 Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L + + ++D+L ++L +E+I+ + + + + R++ Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSLLTQRLQ 354 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 I++ +Q + +E +K+ L ++ Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L ++ TL RGY+ D + N + + Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427 Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505 L ++ ++ DGQA + K Sbjct: 428 LVPGDQVRLHLKDGQAIGRIEEIKEEK 454 >gi|149908787|ref|ZP_01897447.1| exodeoxyribonuclease VII large subunit [Moritella sp. PE36] gi|149808061|gb|EDM68002.1| exodeoxyribonuclease VII large subunit [Moritella sp. PE36] Length = 417 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 144/471 (30%), Positives = 221/471 (46%), Gaps = 57/471 (12%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 + + + GEIS + +SGH Y SLKD+ S++ ++KG ++ F P G + L + Sbjct: 1 MGTLWLTGEISNFVA-PASGHWYLSLKDSRSQVRCAMFKGNNRRVTFRPANGQQVLAKVR 59 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 +T + +YQ++IESL P+G G L E+ K L +G F+ HK +P PK I ++ Sbjct: 60 VTMYEPRGEYQLVIESLSPAGDGLLQQQYEQLKASLDAQGYFAQAHKKALPLHPKRIGIV 119 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 TS TGA + DIL + R P L VII+P VQG + I NAI N E D Sbjct: 120 TSATGAAVHDILTVLERRSPNLPVIIYPTLVQGAQAASAIVNAINIANQRNE------VD 173 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 ++I+ RGGGS+EDLW FN+ + AI NS +PIISA+GHE D T+AD+ AD+RAPTP+ A Sbjct: 174 LLIVGRGGGSLEDLWCFNEASVAEAIFNSQLPIISAVGHEIDVTIADFVADMRAPTPSAA 233 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRL 328 AE+ + HLQ + NL RLN I + K + L ++L + L +L Sbjct: 234 AELVSQDQAHLQQQVTNLSQRLNKAIQTQLAKKQHQQRYLQQSLMSQHPQHKLQQQNQKL 293 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 D L L + I ++ H + R++S +H +Q Q + + Sbjct: 294 DELSLRLNQAVNRHISKQKLHLTQLTGRLQSRSPVHKFTAMQQQQANFQTRLHSAM---- 349 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + R+ H++ + Sbjct: 350 ---------------------QRRLQQEQNHLQ----------------------NLAQQ 366 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 LQ+ + TL RGY+ Q+ IT L + +++ F DG+ + + Sbjct: 367 LQTVSPLATLTRGYSITQNDKQQVITSVAKLKSGDKLITRFTDGEIQSTID 417 >gi|21243144|ref|NP_642726.1| exodeoxyribonuclease VII large subunit [Xanthomonas axonopodis pv. citri str. 306] gi|23821542|sp|Q8PJW7|EX7L_XANAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|21108665|gb|AAM37262.1| exodeoxyribonuclease VII large subunit [Xanthomonas axonopodis pv. citri str. 306] Length = 445 Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats. Identities = 129/494 (26%), Positives = 223/494 (45%), Gaps = 56/494 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E V V E+S +SGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNSLARDLLEGGFPLVWVEAELSSVT-RPASGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLTAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQALPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L L + RL L R E + R + R++ Sbjct: 298 LALRLRA-----QSPQARLQLLHRRQEDAGRQLRARMMHVLERLQARVQRGQAQLQSHNP 352 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++H+ QQ + + + Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488 + +++ + R L++ + T+ RGY + N + + + T R+ Sbjct: 371 AMQRRLQHDQLQLRRIARSLEAVSPLATVARGYAIVTRPANGSVVRSAAEVVTGERLRAQ 430 Query: 489 FFDGQANAIVINKA 502 DG V + Sbjct: 431 LADGSIEVRVESGE 444 >gi|328956984|ref|YP_004374370.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. 17-4] gi|328673308|gb|AEB29354.1| exodeoxyribonuclease VII large subunit [Carnobacterium sp. 17-4] Length = 454 Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats. Identities = 151/504 (29%), Positives = 236/504 (46%), Gaps = 61/504 (12%) Query: 8 NSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 N L + +V+ L+ ++K E + L + + GEIS +R ++ H YFSLKD+H++I Sbjct: 7 NKLSNDYLTVTALTKYIKRKFERDPYLERIYLTGEISNFRNRANA-HQYFSLKDDHAKIS 65 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 AI++K K++F PEEG++ LVIG+I+ + S YQI IE + P G G L ALE+ KK Sbjct: 66 AIMFKAAFQKLKFTPEEGMKVLVIGRISLYEASGNYQITIEHMEPDGVGALYQALEEMKK 125 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 KL EGLF + IP PK IAV+TSP+GAVIRDI+ I RFP ++++I+P VQG+ Sbjct: 126 KLKNEGLFDAPKQL-IPTFPKRIAVVTSPSGAVIRDIMTTIKRRFPIVQLVIYPTLVQGN 184 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + I +I + D +ILARGGGSIEDLW FN+E + RAI + PII Sbjct: 185 KAADAIVASIRMV------EEKGDFDTMILARGGGSIEDLWPFNEEKVARAIFEAQTPII 238 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 S++GHETD T+AD AD+RA TPT AAE++VP+ + L+ RL R ++ Sbjct: 239 SSVGHETDTTIADLVADVRAATPTAAAEISVPLLSEELIKIEQLKLRLVQSYARKVEILN 298 Query: 305 NT--LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + +LD L L +E + N + ++ + Sbjct: 299 QRLTSQLNSYIFNQPQRLYEGYAQKLDLLTERLVRAMEEKNQQLKNDLNVHMLQLNAQNP 358 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 +++ + + + ++ + Sbjct: 359 TQLVKQKHSDLNVMNKQLTTQMEWY----------------------------------- 383 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + ++ K + L + + RGY+ + I + + + Sbjct: 384 --------MENQTKR----FQYAVQSLDYLSPLKIMNRGYSYAT-KDGKVIKDSKQVEVE 430 Query: 483 TRILINFFDGQANAIVINKAPPKE 506 +I I+ G A VI K + Sbjct: 431 DKIHIHLHKGTFEAKVIKKEEESK 454 >gi|187478590|ref|YP_786614.1| exodeoxyribonuclease VII large subunit [Bordetella avium 197N] gi|123514710|sp|Q2KZF3|EX7L_BORA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|115423176|emb|CAJ49707.1| exodeoxyribonuclease VII large subunit [Bordetella avium 197N] Length = 452 Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats. Identities = 122/491 (24%), Positives = 222/491 (45%), Gaps = 57/491 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV++L+ + ++E ++ + VRGE+S + +SGH YF+LKD + + ++++G Sbjct: 16 ILSVAQLNQAVGQLMERSIPPLWVRGEVSNFT-QAASGHWYFTLKDAGAAVRTVMFRGRA 74 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + + F+P G E + G+++ + YQ+ +++ +G G L A + K KL EGLF Sbjct: 75 SMVGFVPRPGDEVEIRGRVSLYEPRGDYQLQADAMRRAGVGNLFEAFSRLKDKLASEGLF 134 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P+ I V+TS A +RD+L ++ R P + ++I+P VQG + +A Sbjct: 135 DASRKRVPLRLPRAIGVVTSLQAAALRDVLSALARRAPQVEIVIYPAPVQGADAASRLAA 194 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + Q + +E D ++L RGGGSIEDLW FNDE + RA+A+ +IP+IS +GHETD Sbjct: 195 QVRQASARRE------VDTLLLVRGGGSIEDLWSFNDEDLARAVADCAIPVISGVGHETD 248 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ ADLRAPTPT AAE+A + L S+ Sbjct: 249 FTIADFVADLRAPTPTAAAELACVPRAELLSA---------------------------- 280 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L ++ LS ++ R L + + ++ + + Sbjct: 281 -LGHAASRLSRAQQRRLDLAAQ--------------RLDRASAQLV--SPAQRLAHQCER 323 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + ++ L + + + ++ L R+ Sbjct: 324 LNTLRHRLAASA----QRPLAASAARLTGLAQRLARRAPQTARVQDRVQSLAQRLLRGQQ 379 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + L++ ++TL RGY ++D ++ L + I+ G Sbjct: 380 AGLAERGVRLQALAAQLRALDPEHTLARGYAVLRDAQGRVVSNASALVVGEGVRIDLAQG 439 Query: 493 QANAIVINKAP 503 + A + + P Sbjct: 440 RVQADITDVQP 450 >gi|84624239|ref|YP_451611.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|123521754|sp|Q2P290|EX7L_XANOM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|84368179|dbj|BAE69337.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 445 Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 221/490 (45%), Gaps = 56/490 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A + + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVPRVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L L + RL L R E + R + + R++ Sbjct: 298 LALRLRA-----HSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQRGHAQVQSHNP 352 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++H+ QQ + + + Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488 + +++ + R L++ T+ RGY + + + + +A R+ Sbjct: 371 AMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLRAQ 430 Query: 489 FFDGQANAIV 498 DG V Sbjct: 431 LADGSIEVRV 440 >gi|170693527|ref|ZP_02884686.1| exodeoxyribonuclease VII, large subunit [Burkholderia graminis C4D1M] gi|170141682|gb|EDT09851.1| exodeoxyribonuclease VII, large subunit [Burkholderia graminis C4D1M] Length = 489 Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats. Identities = 138/509 (27%), Positives = 241/509 (47%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 MN S S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 31 MNSDSSLTSSTMPGGEVVVPVSALNRAIGSMLERSFPLVWVAGEVSNFT-RAASGHWYFS 89 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD +++ ++++G EF P+EG V +T + + Q+ +E++ +G G L Sbjct: 90 IKDAQAQMRCVMFRGRAQYAEFTPKEGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 149 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K +P P+ I ++TS A +RD+L +S R P + VI Sbjct: 150 YEAFLRLKAQLEAEGLFAAERKRALPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 209 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 ++P VQG ++A + ++ +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 210 VYPAPVQGVGASAKLAAMVDAVSARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 263 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S++P++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L + A L Sbjct: 264 IAESAVPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHATLARG 323 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L+ R L +L L + F+ Sbjct: 324 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSARLASAGARPVRDARARFS---- 379 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 L Q+ R + Q + + ++ + + + + A Sbjct: 380 -----LLQMRWQRWRPDLAAHQARLGNLTQRLDAALLRQHERQAAR-------------- 420 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 ++ + L+ + + TL+RGY ++ D + Sbjct: 421 --------------------------IATLSARLEVLSPQRTLERGYAAVLDAQTGRAVR 454 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + P Sbjct: 455 APSSLKPGRRLTMHLAEGTADVALADVQP 483 >gi|116514373|ref|YP_813279.1| exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274895|sp|Q049N1|EX7L_LACDB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|116093688|gb|ABJ58841.1| Exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 456 Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats. Identities = 144/507 (28%), Positives = 249/507 (49%), Gaps = 58/507 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 D +VSEL++++K + + L + ++GE+S +R GH YFSLKD+ Sbjct: 1 MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 S+I+ ++++G +K++F PEEG++ V G+++T+ YQ +S+ PSG G L Sbjct: 60 SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPSGLGALYERFR 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++KL +EGLF+ +HK P+P P IAV+TS +GAVI DI+ + RFP + +FP + Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+IS++GHETD TL D AAD RA TPT AAEMA P + + + L+ RL I +I Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALPLVLAEIGQLQTRLLTDIRAVI 294 Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L + + ++D+L ++L +E+I+ + + + + R++ Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSLLTQRLQ 354 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 I++ +Q + +E +K+ L ++ Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L ++ TL RGY+ D + N + + Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427 Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505 L ++ ++ DGQA + K Sbjct: 428 LVPGDQVRLHLKDGQAIGRIEEIKEEK 454 >gi|188576156|ref|YP_001913085.1| exodeoxyribonuclease VII large subunit [Xanthomonas oryzae pv. oryzae PXO99A] gi|226697622|sp|B2SHP3|EX7L_XANOP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|188520608|gb|ACD58553.1| exodeoxyribonuclease VII, large subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 445 Score = 339 bits (870), Expect = 6e-91, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 221/490 (45%), Gaps = 56/490 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A + + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQLLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVPRVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L L + RL L R E + R + + R++ Sbjct: 298 LALRLRA-----HSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQRGHAQVQSHNP 352 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++H+ QQ + + + Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488 + +++ + R L++ T+ RGY + + + + +A R+ Sbjct: 371 AMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLRAQ 430 Query: 489 FFDGQANAIV 498 DG V Sbjct: 431 LADGSIEVRV 440 >gi|313124104|ref|YP_004034363.1| exodeoxyribonuclease 7 large subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280667|gb|ADQ61386.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 456 Score = 339 bits (870), Expect = 6e-91, Method: Composition-based stats. Identities = 144/507 (28%), Positives = 251/507 (49%), Gaps = 58/507 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 D +VSEL++++K + + L + ++GE+S +R GH YFSLKD+ Sbjct: 1 MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 S+I+ ++++G +K++F PEEG++ V G+++T+ YQ +S+ P+G G L Sbjct: 60 SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++KL +EGLF+ +HK P+P P IAV+TS +GAVI DI+ + RFP + +FP + Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQ 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+IS++GHETD TL D AAD RA TPT AAEMA P + + + L+ RL I +I Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALTLVLAEIGQLQTRLLTDIRAVI 294 Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L + + ++D+L ++L +E+I+ + + + + R++ Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSQMMEVIVKDQGQKLSLLTQRLQ 354 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 I++ +Q + +E +K+ L ++ Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L ++ TL RGY+ D ++N + + Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASDNVVKSVQQ 427 Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505 LA ++ ++ DGQA + K Sbjct: 428 LAPGDQVHLHLKDGQAIGRIEEIKEGK 454 >gi|56964230|ref|YP_175961.1| exodeoxyribonuclease VII large subunit [Bacillus clausii KSM-K16] gi|81822079|sp|Q5WF60|EX7L_BACSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|56910473|dbj|BAD65000.1| exodeoxyribonuclease VII large subunit [Bacillus clausii KSM-K16] Length = 458 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 151/492 (30%), Positives = 248/492 (50%), Gaps = 60/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 ++VSE + ++K ++E + L + +RGE+S ++ H+ GH YF++KD SR+ A+++ G Sbjct: 11 WTVSEATRYIKQLLEDDPHLPEIWIRGELSNFK-QHTRGHMYFTIKDEGSRMQAVMFAGY 69 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F PE G+ L+ G+I + +YQ + + P G G+L E+ KK L EGL Sbjct: 70 NRFLRFKPENGMNVLIRGEINVYEPYGQYQFYAKEMQPDGIGSLFAEYERLKKALEAEGL 129 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+++ K PIP P IA+ITSPTGAVIRD++ + R+P +RV +FPV VQG+ P I+ Sbjct: 130 FAEERKRPIPRFPTHIAIITSPTGAVIRDMMTTLKRRYPQIRVTLFPVLVQGEGAPLSIS 189 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ Q D++I+ARGGGSIE+LW FN+EM+ RAIA +++P+ISA+GHET Sbjct: 190 RALEQ------ASMANIFDVVIVARGGGSIEELWAFNEEMVARAIAEAAVPVISAVGHET 243 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T++D+AAD RAPTPT AAE AVP L + +L+ RL ++ +K + L L Sbjct: 244 DFTISDFAADRRAPTPTAAAEFAVPDARELMEHIGHLKKRLERSLVEQVKTRRRELERLK 303 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 ++ Q + +LD L L ++I + +K F H+ I + + Sbjct: 304 RSYAFRYPVQLVHQKEQQLDGLMERLNRAMQIKLEQKTLAFKHMNQAILRQHPATRVSQL 363 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++ + + + + R Sbjct: 364 QKERRQNHARLVRAMAAE------------------------------------TQRKRQ 387 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 LS I+ LQ + + RGY+ + + + +++ + I++ Sbjct: 388 SLSAVIQQ-----------LQLLSPLAVMDRGYSLVY-KDEALVKTAKDVEIEDDIVVKL 435 Query: 490 FDGQANAIVINK 501 DG + V+ K Sbjct: 436 ADGNLHCQVVGK 447 >gi|210622492|ref|ZP_03293197.1| hypothetical protein CLOHIR_01145 [Clostridium hiranonis DSM 13275] gi|210154205|gb|EEA85211.1| hypothetical protein CLOHIR_01145 [Clostridium hiranonis DSM 13275] Length = 466 Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats. Identities = 145/500 (29%), Positives = 243/500 (48%), Gaps = 39/500 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +SE + ++K ++ ++ L ++ VRGEIS ++ I+SSGH Y +LKD S++ + Sbjct: 1 MEIRALEISEANSYIKKVLSNDPILYNLKVRGEISNFK-INSSGHVYLTLKDETSKMKCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 I+KG +K E+G++ + G I+ + YQ+ I + G G L E+ KKKL Sbjct: 60 IFKGNYDK-SLQLEDGMKIVANGYISVYERDGAYQLYIRKVEKDGVGNLHIEFERLKKKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF + K IP++PK I V+TS TGAVIRDI+ + RFP + V ++PV VQG Sbjct: 119 NREGLFDPRFKKKIPYMPKSIGVVTSQTGAVIRDIINVVRRRFPKVNVYLYPVAVQGANS 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI I N ++ D +I+ RGGGS+E+LW FN+E + RAI S IPIISA Sbjct: 179 ADEIVKGIEFFNKMQ------NVDTMIVGRGGGSLEELWSFNEEKVARAIFASDIPIISA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T+ D+ +D+RAPTP+ AAE+AVP + L N +++L N + +I+ N Sbjct: 233 VGHEVDYTICDFVSDMRAPTPSAAAEIAVPDLNEVLYRLDNCKSQLKNNMSAVIERDRNK 292 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ ++ + + + L+ + +L +E I ++ + I S Sbjct: 293 ADNTFNSICTIVKNDVIKSGKNNLELISNKLTRGIESKIEKEKYQLENNFLEICSIVKNE 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I++ + ++ IE N+I + Sbjct: 353 VIKEGKNNLKVISNRIE-------------------------NSISNKIDIEKYRLDTAS 387 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + S ++ T +L S + T+ RGY +Q + ++ Sbjct: 388 VNMVNSMEQIMSSKKENMRNTGALLHSLSPLATIDRGYCMVQ-KEGKTVNSTEDINVGES 446 Query: 485 ILINFFDGQANAIVINKAPP 504 + I DG A+ V + Sbjct: 447 LSIMMSDGNADCTVNSIEKK 466 >gi|294626016|ref|ZP_06704626.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599686|gb|EFF43813.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 445 Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats. Identities = 129/496 (26%), Positives = 225/496 (45%), Gaps = 60/496 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ L +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHLEEAGEGALRRAFDELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R + R+L + ++ R +++S Sbjct: 298 LALRLRVQSPQARLQLFHRRQEDAGRQLRARMMHVLERLQARVQRGQAQLQSHNPQR--- 354 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 H+ QQ + + Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486 + + +++ + R L++ + T+ RGY + + + + + T R+ Sbjct: 369 QAAMQRRLQHDQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRNAAEVVTGERLR 428 Query: 487 INFFDGQANAIVINKA 502 DG V + Sbjct: 429 AQLADGSIEVRVESGE 444 >gi|124007174|sp|Q5GZ80|EX7L_XANOR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 445 Score = 339 bits (869), Expect = 8e-91, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 222/490 (45%), Gaps = 56/490 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNALARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A + + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDALRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQSLPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L L + RL L R E + R + + R++ Sbjct: 298 LALRLRA-----HSPQARLQLLHRRQEEAGRQLGARMTQVLERLQARVQRGHAQVQSHNP 352 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++H+ QQ + + + Sbjct: 353 QRHLAGLQQRLRALHP------------------------------------------QA 370 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILIN 488 + +++ + R L++ T+ RGY + + + + +A R+ Sbjct: 371 AMQRRLQHDQLQLRSIARSLEAVNPLATVARGYAIVTRPADGSVVRSAAEVAAGERLRAQ 430 Query: 489 FFDGQANAIV 498 DG V Sbjct: 431 LADGSIEVRV 440 >gi|91785012|ref|YP_560218.1| exodeoxyribonuclease VII large subunit [Burkholderia xenovorans LB400] gi|91688966|gb|ABE32166.1| Exodeoxyribonuclease VII large subunit [Burkholderia xenovorans LB400] Length = 459 Score = 339 bits (868), Expect = 9e-91, Method: Composition-based stats. Identities = 142/509 (27%), Positives = 238/509 (46%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 MNP S S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 1 MNPESPFFSSAAPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD +++ ++++G EF P EG V +T + + Q+ +E++ +G G L Sbjct: 60 IKDAQAQMRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K P+P P+ I ++TS A +RD+L +S R P + VI Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRPLPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 ++P VQG ++A + N +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 180 VYPAPVQGAGVSGKLAAMVDAANARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L + A L Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHATLARG 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L+ R L +L L + F+ + Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASGGTRPVRDARARFSLLQM 353 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R + ++ +R + ++ + + Sbjct: 354 RWQRWRP--DLAGHRAKLGNLAGRLDTALLRQH-------------------------ER 386 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 I L R L+ + + TL+RGY ++ D + Sbjct: 387 QTARIDTLAAR----------------------LEVLSPQRTLERGYAAVLDAQSGRAVR 424 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + P Sbjct: 425 APSSLKPGRRLTVHLAEGAADIALADVQP 453 >gi|85712715|ref|ZP_01043760.1| exodeoxyribonuclease VII large subunit [Idiomarina baltica OS145] gi|85693447|gb|EAQ31400.1| exodeoxyribonuclease VII large subunit [Idiomarina baltica OS145] Length = 439 Score = 339 bits (868), Expect = 9e-91, Method: Composition-based stats. Identities = 137/485 (28%), Positives = 224/485 (46%), Gaps = 53/485 (10%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V++L+ ++ +E HV + GEIS + +SGH Y +LKD ++I +++G Sbjct: 3 IYTVTQLNSDIRKAIEQGFGHVWLMGEISNF-AAPNSGHWYLTLKDERAQIRCAMFRGNN 61 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + + P+ G++ LV G++T + YQ+I+E + +G G L E+ K KL EGLF Sbjct: 62 QRAKVRPQNGLQVLVRGRVTVYEPRGDYQLIVEHMEEAGIGLLQQQFEQLKVKLAAEGLF 121 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P + + VITSPTGA I+D+L + R P + VII+P VQGD +I Sbjct: 122 AQERKRPLPEHIRRVGVITSPTGAAIQDVLAVMKRRDPSVDVIIYPTAVQGDAAIPQI-- 179 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 N L D++I+ RGGGS+EDLW FNDE + R + ++ +P+ISAIGHE D Sbjct: 180 ----KNALHTAFQRNEVDVLIVTRGGGSLEDLWCFNDEQVGRLLLDAPVPVISAIGHEVD 235 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+ D+ ADLRAPTP+ AAE + + Sbjct: 236 FTICDFIADLRAPTPSAAAEQVTQDRSAQVNR---------------------------- 267 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L Q L+ + R L L+I + +++ + D L+ + + +Q Sbjct: 268 -LQQLQQRLATGQKRRIERQHSLLQQLQIRLNQQHPQRQLQQQSQRLDELLARVYRAQQR 326 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 L QQ Q R + + +++ Q + RI + L Sbjct: 327 TLVNQQQRRQ--HAIQRLQQVHPQRELSRAQQKLSQIQQRIPLVAEAW----------LK 374 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + + L + NTL RGY ++D + ITQ + ++ + G Sbjct: 375 QQHQRQRALLHA----LNLVSPLNTLDRGYAIVRDEEGHVITQPEQTQAEQKLSVKVAGG 430 Query: 493 QANAI 497 + N Sbjct: 431 EFNVR 435 >gi|307730800|ref|YP_003908024.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. CCGE1003] gi|307585335|gb|ADN58733.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1003] Length = 459 Score = 339 bits (868), Expect = 9e-91, Method: Composition-based stats. Identities = 140/509 (27%), Positives = 238/509 (46%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 MN S S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 1 MNSDSPFTSSTLPGGEVVVPVSALNRAIGSMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD +++ ++++G EF+P+EG V +T + + Q+ +E++ +G G L Sbjct: 60 IKDAQAQMRCVMFRGRAQYAEFMPKEGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K +P P+ I ++TS A +RD+L +S R P + VI Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRTLPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 ++P VQG ++A + + +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 180 VYPAPVQGAGASAKLAAMVEAASARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L A L Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDQRHATLARG 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L+ R L +L L + F+ + Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRMHLQQLSARLTSAGARPVRDARARFSLLHM 353 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R + ++ +R + Q ++ + + Sbjct: 354 RWQRWRP--DLDAHRARLDGLAQRLDAALLRQHERQVA---------------------- 389 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 I L R L+ + + TL+RGY ++ D + Sbjct: 390 ---RIATLSAR----------------------LEVLSPQRTLERGYAAVLDAQTGRAVR 424 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + P Sbjct: 425 APASLKPGRRLTVHLAEGAADVALSDVQP 453 >gi|296157202|ref|ZP_06840038.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. Ch1-1] gi|295892538|gb|EFG72320.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. Ch1-1] Length = 459 Score = 339 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 142/509 (27%), Positives = 239/509 (46%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 MNP S S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 1 MNPESPFFSSAAPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD +++ ++++G EF P EG V +T + + Q+ +E++ +G G L Sbjct: 60 IKDAQAQMRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K P+P P+ I ++TS A +RD+L +S R P + VI Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRPLPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 ++P VQG ++A + N +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 180 VYPAPVQGAGVSAKLAAMVDAANARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L + A L Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHATLARG 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L+ R L +L L + F+ + Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASAGTRPVRDARARFSLLQM 353 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R + ++ ++ + Q ++ + + Sbjct: 354 RWQRWRP--DLAGHQAKLGNLAQRLDMALLRQH-------------------------ER 386 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 I L R L+ + + TL+RGY ++ D + Sbjct: 387 QTARIDTLAAR----------------------LEVLSPQRTLERGYAAVLDAQSGRAVR 424 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + P Sbjct: 425 APSSLKPGRRLTVHLAEGAADIALADVQP 453 >gi|104774288|ref|YP_619268.1| exodeoxyribonuclease VII large subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|123077235|sp|Q1G9H2|EX7L_LACDA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|103423369|emb|CAI98225.1| Exodeoxyribonuclease VII, large subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 456 Score = 339 bits (868), Expect = 1e-90, Method: Composition-based stats. Identities = 142/507 (28%), Positives = 248/507 (48%), Gaps = 58/507 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 D +VSEL++++K + + L + ++GE+S +R GH YFSLKD+ Sbjct: 1 MDSIKGTDEKYLTVSELNWYVKQKFDRDPYLRQIFLQGELSNFRFR-RGGHQYFSLKDDK 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 S+I+ ++++G +K++F PEEG++ V G+++T+ YQ +S+ P+G G L Sbjct: 60 SKINVVMFRGDFDKVKFEPEEGMKVYVTGRLSTYEAQGSYQFYAKSMEPAGLGALYERFR 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180 + ++KL +EGLF+ +HK P+P P IAV+TS +GAVI DI+ + RF + +FP + Sbjct: 120 QLQEKLAKEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFSHAEIDLFPAQ 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + Sbjct: 180 VQGESAAGSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMK 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+IS++GHETD TL D AAD RA TPT AAEMA P + + + L+ RL I +I Sbjct: 235 MPVISSVGHETDTTLCDLAADCRAATPTAAAEMATPALPLVLAEIGQLQTRLLTDIRAVI 294 Query: 301 KYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L + + ++D+L ++L +E+I+ + + + + R++ Sbjct: 295 QVRAQALAQLENSFIMKEPQRLYEQKMQQVDQLSQQLSRMMEVIVKDQGQKLSLLTQRLQ 354 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 I++ +Q + +E +K+ L ++ Sbjct: 355 HQAPDRRIKQLKQENSYLAKSLEMGIKRILEQKQAACRQ--------------------- 393 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + L ++ TL RGY+ D + N + + Sbjct: 394 --------------------------AVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQ 427 Query: 479 LATKTRILINFFDGQANAIVINKAPPK 505 L ++ ++ DGQA + K Sbjct: 428 LVPGDQVRLHLKDGQAIGRIEEIKEEK 454 >gi|74317529|ref|YP_315269.1| exodeoxyribonuclease VII large subunit [Thiobacillus denitrificans ATCC 25259] gi|123745467|sp|Q3SIR1|EX7L_THIDA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|74057024|gb|AAZ97464.1| Exonuclease VII, large subunit [Thiobacillus denitrificans ATCC 25259] Length = 451 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 144/492 (29%), Positives = 219/492 (44%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ + +ES L + V GE+S + +SGH YFSLKD +++ ++++G Sbjct: 16 VLSVSELNRMARRALESQLPLLWVEGEVSNF-MRAASGHWYFSLKDATAQVRCVMFRGRN 74 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 EF P G + + + ++Q+ ES+ +G+G L A + K KL EGLF Sbjct: 75 QFAEFTPANGDHVEIRALPSLYEARGEFQLGAESIRRAGAGRLYEAFVRLKAKLEGEGLF 134 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P P+ + V+TSP A +RD+L + R P L VI++P VQG +IA Sbjct: 135 DPAKKRALPRFPRCLGVVTSPQAAALRDVLTALGRRMPGLPVILYPTPVQGSGAGAQIAA 194 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI T E D++++ RGGG++EDLW FNDE + RAIA S IP++S +GHETD Sbjct: 195 AIRAAGTRAE------CDVLLVCRGGGALEDLWAFNDEAVARAIAASPIPVVSGVGHETD 248 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+AADLRAPTPT AAE+A PV E + +L L R + + L+ L + Sbjct: 249 FTLADFAADLRAPTPTAAAELASPVAEEMLRALERHARLLRQHHARRQQADMQRLDYLAR 308 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + Q L + + +L + L + + R+ + + H +Q+ +Q Sbjct: 309 RLIHPAQQLRRRQLGIAQLAQRLHGAVRARLTREQLRIAQLGE--RRTSPRHALQRQQQV 366 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + L Sbjct: 367 LESLGARAARAAESARIGRGLTLAR----------------------------------- 391 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 L N L RGY+ +Q N + L + I F G Sbjct: 392 ------------LASSLAHLNPDNVLARGYSIVQQENGAVVHDAATLRAGDGLEIRFHRG 439 Query: 493 QANAIVINKAPP 504 A+A V + P Sbjct: 440 AAHARVESAQPE 451 >gi|325923182|ref|ZP_08184867.1| Exodeoxyribonuclease VII large subunit [Xanthomonas gardneri ATCC 19865] gi|325546327|gb|EGD17496.1| Exodeoxyribonuclease VII large subunit [Xanthomonas gardneri ATCC 19865] Length = 453 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 129/494 (26%), Positives = 224/494 (45%), Gaps = 60/494 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNTLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K P+P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAHARMAQLQQHALGNAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R + R+L + ++ R R+ + Sbjct: 298 LALRLRAHSPQARLQLLHRRQEDAGRQLRARMTQVLERLQARVQRGQARLHAHNPQR--- 354 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + QQ ++ + Q + R+ Sbjct: 355 ----DLANLQQRLQALHPQ----------------------------------AAMQRRL 376 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRIL 486 + + R L++ + T+ RGY + + + + ++ R+ Sbjct: 377 QH--------DQLRLRGLARSLEAVSPLATVARGYAIVTRPTDGSVVRSAGEVSPGERLR 428 Query: 487 INFFDGQANAIVIN 500 DG V + Sbjct: 429 AQLADGSIEVRVES 442 >gi|330686013|gb|EGG97636.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis VCU121] Length = 445 Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats. Identities = 150/492 (30%), Positives = 239/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LTVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLSKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F + +K PIP PK IAV+T+ TGA IRDI I+ R+P + + VQG + +I Sbjct: 124 FDNSNKKPIPRFPKRIAVLTASTGAAIRDIHSTINSRYPLVEQVQISTLVQGKQAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + L D II+ RGGGSIEDLW+FN+E +V+AI PIISA+GHET Sbjct: 184 EKIKYADQL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIFECQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA MA P + L + + L I + ++ L L Sbjct: 237 DFTLSDFVADVRAATPTQAAVMATPDQYELLQQIKQYQFTLTRHIKQYVEQHKKHLEHLA 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L ++L L + ++ N + R L +I +N Sbjct: 297 SYYKFKQPSLLYDQQIQRRDDLEKQLNQKLASKLEQQQHQLNILKQRFNPKHLETSIVRN 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q + + + Q I +++ + Sbjct: 357 QQQNGQLKSRLTQ------------------------------------KINNDLSQYKN 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L KI+ L + NT+ RGY + + +++ +T ++++ I++ Sbjct: 381 ALKSKIEQ-----------LNQLSPTNTMLRGYAIV-NKDDDVVTSTKDMSENDEIVLTM 428 Query: 490 FDGQANAIVINK 501 DGQ +AIV Sbjct: 429 KDGQIDAIVKKV 440 >gi|227513487|ref|ZP_03943536.1| exodeoxyribonuclease VII large subunit [Lactobacillus buchneri ATCC 11577] gi|227083360|gb|EEI18672.1| exodeoxyribonuclease VII large subunit [Lactobacillus buchneri ATCC 11577] Length = 452 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 164/502 (32%), Positives = 258/502 (51%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV+ L+ ++K V+ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTTEYLSVTALTKYIKRKFDVDPYLMKVYLTGEISNFRLRPNA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K N+I+F+PEEG++ LV G I+ + S YQI ++S+ P G G L A E+ KKKL Sbjct: 60 MFKSAFNRIKFVPEEGMKVLVTGHISVYEPSGSYQIYVDSMEPDGVGQLYQAYEQLKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLFS + + F PK IAV+TSP+GAV+RDI+ + R+P+ ++++FP VQGDE Sbjct: 120 DKEGLFSQPKRQLVQF-PKRIAVVTSPSGAVVRDIITTVRRRYPIAQIVLFPALVQGDEA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I+++N L D +I+ RGGGSIEDLW FN+E + RAI+ S+IP+IS+ Sbjct: 179 STDIVRQIVKVNQLGH------FDTLIIGRGGGSIEDLWPFNEENVARAISASTIPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVP + + L + R+ N +LI+ Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVELKTTQNRIINAEYQLIEQAKLR 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + + + +LD L + LE+ + + + + + + R++ + Sbjct: 293 LKRLQQSTVFTSPQRIYETFSQKLDLLRQRLENQADKVTASRKNNLSQLHMRLRLVAPTY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I++ +Q + Q ++Q Sbjct: 353 MIKEQKQRLNVLQLRLKQ------------------------------------------ 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + L + L RGYT D N++FI++ +L K Sbjct: 371 -----SQLQNLNKVKQQYLMLVGSLDHLSPLKILGRGYTYTTDENDHFISKMADLKAK-T 424 Query: 485 ILINFFDGQANAIVINKAPPKE 506 I ++F DG NA + KE Sbjct: 425 INVHFSDGVINASINKMTKGKE 446 >gi|294666465|ref|ZP_06731708.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603771|gb|EFF47179.1| exodeoxyribonuclease VII large subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 445 Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 128/496 (25%), Positives = 225/496 (45%), Gaps = 60/496 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ L +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHLEEAGEGALRRAFDELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 M------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R + R+L + ++ R +++S Sbjct: 298 LALRLRVQSPQARLQLFHRRQEDAGRQLRARMMHVLERLQARVQRGQAQLQSHNPQR--- 354 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 H+ QQ + + Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486 + + +++ + R L++ + T+ RGY + + + + + T R+ Sbjct: 369 QAAMQRRLQHDQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRNAAEVVTGERLR 428 Query: 487 INFFDGQANAIVINKA 502 DG V + Sbjct: 429 AQLADGSIEVRVESGE 444 >gi|325273795|ref|ZP_08139984.1| exodeoxyribonuclease VII large subunit [Pseudomonas sp. TJI-51] gi|324101076|gb|EGB98733.1| exodeoxyribonuclease VII large subunit [Pseudomonas sp. TJI-51] Length = 462 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 144/500 (28%), Positives = 238/500 (47%), Gaps = 57/500 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF ++ LD +VS+L+ + ++E V V GEIS +SGH YF+LKD+ Sbjct: 7 DPF-ERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNL-ARPASGHMYFTLKDSG 64 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ +G+ V GK++ F G YQ+I++++ P+G G L A E Sbjct: 65 AQVRCALFRQSATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFE 124 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLFS + K P+P P+ I +ITSPTGAVIRDI+ R P + + + P Sbjct: 125 ALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTA 184 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I AI + L D +ILARGGGS+EDLW FN+E + RA+A Sbjct: 185 VQGREAIAQIVRAIRLADGL-------GFDALILARGGGSLEDLWCFNEEAVARAVAACV 237 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P ++ L L+ RL + + Sbjct: 238 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSGIRQRLEGLQRRLLLRMQNRL 297 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+SL + L + + L RLD L L + + ++ R+ + Sbjct: 298 SHDRLRLDSLTRRLRHPGERLRQQAQRLDDLDMRLRRAFLLSLNQRRERLARAETRLAAQ 357 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 N++ Q + + + + +++ +L R++ + ++ Sbjct: 358 HPGRNLKLLAQRLDSLAERLPRAMRE--------------LLKDRRQRFQTQL------- 396 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + LQ + TL RGY+ + D I Sbjct: 397 --------------------------QTLQVVSPLATLARGYSILLDDQGQAIRSAEQTR 430 Query: 481 TKTRILINFFDGQANAIVIN 500 R+ G+ V + Sbjct: 431 NGQRLTARLDQGELLVRVED 450 >gi|329896813|ref|ZP_08271729.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium IMCC3088] gi|328921568|gb|EGG28948.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium IMCC3088] Length = 456 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 145/499 (29%), Positives = 230/499 (46%), Gaps = 52/499 (10%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 Q ++ D EY+VS L+ + ++E + + V GEIS + SSGH YFSLKD+++++ Sbjct: 6 QPHNADTQEYTVSALNGAARRLLEGHFQILWVVGEISNFT-RASSGHWYFSLKDDNAQVR 64 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++K ++F+P+ G + + K++ + G ++Q+I E + P+G+G L A + K Sbjct: 65 CAMFKNRNQFLKFIPKHGDKVRLRAKVSLYEGRGEFQLIGEYIEPAGTGDLQLAFIQLKA 124 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184 +L EGLF+ + K IP K I VITS GA + DIL + R+ L VII VQG Sbjct: 125 QLEAEGLFAPERKKSIPSQVKRIGVITSAKGAALHDILSVLHGRWAGLEVIIADTPVQGA 184 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E P + A+ +L E DI+I+ RGGGS+EDLW FN+E + R IA IP I Sbjct: 185 EAPAGLTYALHKLARFHETAP---IDIVIIGRGGGSLEDLWAFNNEQLARTIAAYKIPTI 241 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD+T+ D+ AD RAPTP+ AA MA P S + RL+ ++K K Sbjct: 242 SAVGHETDFTICDWVADARAPTPSAAAAMASPDHSKAPSRIHEALVRLSKGYTAILKTKG 301 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L + + + R+D L L+ + +K + + R+ Sbjct: 302 TELRNSRARLRHPGELIEQRVLRIDELELRLKAQQSRLTQQKTAQYQQLFKRLSWHSPAR 361 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 N++ + +L+ Q + Sbjct: 362 NLRALNEQVLKLQTRLI------------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + T +L S + T+ RGY +++ + + +T A KT+ Sbjct: 379 ----SGQQRLLSAHTGRHKQTEYVLHSLSPMRTVDRGYAILRNADGHVVTGVSGFAEKTK 434 Query: 485 ILINFFDGQANAIVINKAP 503 DGQ N V P Sbjct: 435 GSATLKDGQINFEVSAINP 453 >gi|209522452|ref|ZP_03271053.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. H160] gi|209497114|gb|EDZ97368.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. H160] Length = 459 Score = 338 bits (866), Expect = 2e-90, Method: Composition-based stats. Identities = 142/509 (27%), Positives = 231/509 (45%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 M P + S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 1 MTPENPFASAATPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD ++I ++++G EF P EG V +T + + Q+ +E++ +G G L Sbjct: 60 IKDAQAQIRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K +P P+ I ++TS A +RD+L +S R P + VI Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRTLPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 ++P VQG ++A + +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 180 VYPAPVQGAGVSAKLAAMVEAAGARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L + A L Sbjct: 234 IAESVIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRAVLLRELDHRHATLARA 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L R L +L L + F+ + Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLERQRTHLQQLRVRLASAGARPVRDARARFSLLQM 353 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R + ++ R I Q + + + Sbjct: 354 RWQRWRP--DLAAERTRIDTLAQRLNAALSRQHERQVA---------------------- 389 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 I L R L+ + K TL+RGY ++ D I Sbjct: 390 ---RIDMLGAR----------------------LEVLSPKRTLERGYAAVLDAQSGRAIR 424 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + Sbjct: 425 TASSLKPGRRLTMHLAEGSADVALADVQA 453 >gi|15615346|ref|NP_243649.1| exodeoxyribonuclease VII large subunit [Bacillus halodurans C-125] gi|14194728|sp|Q9K967|EX7L_BACHD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|10175404|dbj|BAB06502.1| exodeoxyribonuclease VII (large subunit) [Bacillus halodurans C-125] Length = 458 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 157/501 (31%), Positives = 241/501 (48%), Gaps = 60/501 (11%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 P +VSE++ HLK +E + L V +RGEIS ++ HS GH YF+LKD H+++ A+++ Sbjct: 5 QPILTVSEVTRHLKRTIEDDPLLQDVWMRGEISNFKH-HSRGHMYFTLKDEHAKMSAVMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F PE G++ +V G++ + +YQ+ + P G G L A E+ K++L + Sbjct: 64 AGNNRFLNFKPENGMKVIVRGEVNVYEPFGQYQLYALEMQPDGIGNLYLAYEQLKERLEQ 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF +++K P+P + + IA++TSPTGA IRDI I RFP+ ++ + PV VQG+E P Sbjct: 124 EGLFKEENKKPLPPVARQIAIVTSPTGAAIRDIASTIKRRFPVAQLTLLPVLVQGEEAPH 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA AI Q N D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA+G Sbjct: 184 SIAKAIRQAN------EVGGFDLLIVGRGGGSIEELWAFNEELVARAIYQSVIPIISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD+ AD+RA TPTGAAE+AVP + L S + RL L+K + L Sbjct: 238 HETDYTIADFVADVRAATPTGAAELAVPDLKELISRVNQYTERLKRAQHELLKRQKEHLQ 297 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L K+ Q + LD+ L + ++ + + R+K Sbjct: 298 RLQKSYAFRYPAQLVKQKELELDQQLERLTKHQRRMVSDAKDRLSQLEYRLKRIHP---- 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + Q + ++ L KKE ++ +Q + I Sbjct: 354 ----------EGRLRQAEQARVKLEVLLKKEFQQMMERKEQQFQQAISS----------- 392 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRI 485 L + ++RGY I + + R+ Sbjct: 393 ----------------------LNLLSPLRVMERGYALPYKAKTQELIKSVKQVRMNDRL 430 Query: 486 LINFFDGQANAIVINKAPPKE 506 + DGQ V Sbjct: 431 HLRVTDGQLICDVKEIESESG 451 >gi|226946018|ref|YP_002801091.1| exodeoxyribonuclease VII large subunit [Azotobacter vinelandii DJ] gi|259646284|sp|C1DE08|EX7L_AZOVD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226720945|gb|ACO80116.1| exodeoxyribonuclease VII large subunit [Azotobacter vinelandii DJ] Length = 456 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 145/508 (28%), Positives = 236/508 (46%), Gaps = 57/508 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF Q+ LD +VS+L+ + ++E + V V GEIS +SGH YF+LKD Sbjct: 4 DPF-QRLGLDREILTVSQLNGRARALLEDVFAQVWVEGEISNL-ARPASGHLYFTLKDRQ 61 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ ++ + +G+ V G+++ + G +Q+I++ L P+G G L A E Sbjct: 62 AQVRCALFRQNALRVREILRDGLAVRVRGRVSLYEGRGDFQLILDLLEPAGDGALRLAFE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+KL EGLF+ + K P+P P+ I +++SPTGAVIRDI+ R P + + + P Sbjct: 122 ALKEKLAAEGLFAAERKRPLPAHPRSIGIVSSPTGAVIRDIVSVFRRRAPQVELTLVPTA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I +A+ + D +ILARGGGS+EDLW FN+E++ RA+A + Sbjct: 182 VQGREAVAQIVHALELADRQ-------GFDALILARGGGSLEDLWCFNEEVVARAVAACA 234 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SA+GHETD T+AD+ ADLRAPTP+ AAE+ P LQ L L+ RL + L+ Sbjct: 235 TPVVSAVGHETDVTIADFVADLRAPTPSAAAELLAPDSSDLQRRLDGLQRRLQLRMRHLL 294 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ L + L + + L RLD L L ++ + + R+ + Sbjct: 295 AARRLQLDGLSRRLRHPGERLQQQAQRLDDLELRLRRAMQRRLQGDAERLARLDTRLAAQ 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ + + + + + + + Sbjct: 355 HPERLLGLLRQRLEHLAERLPRAM--------------------------------RSTL 382 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ R+E LQ+ + TL RGY + D I Sbjct: 383 RERRQRLEATAQT---------------LQAVSPLATLGRGYAILLDERGRAIRAAVQAH 427 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQP 508 R+ +G V P QP Sbjct: 428 PGQRLHARLAEGALELRVEAAFPSPPQP 455 >gi|237747399|ref|ZP_04577879.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes HOxBLS] gi|229378750|gb|EEO28841.1| exodeoxyribonuclease VII large subunit [Oxalobacter formigenes HOxBLS] Length = 459 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 145/496 (29%), Positives = 243/496 (48%), Gaps = 57/496 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +V+EL+ + I+E + V + GEIS + +SGH YF+LKD +++ AI+ Sbjct: 17 NASSTVLTVTELNNTVAEILECSFPLVWIAGEISNFT-RAASGHWYFTLKDKMAQVRAIM 75 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG ++F P+EG + V ++ + +Q+ +E++ +GSG L A K KL Sbjct: 76 FKGRTQSVDFFPKEGDKVEVRATVSLYTARGDFQLNVEAIRHAGSGNLYEAFLHLKSKLE 135 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EEGLFS + K PIP + I ++TSP A +RD+L + R P +R++++PV VQGD Sbjct: 136 EEGLFSGERKRPIPAFARTIGIVTSPQAAALRDVLTTLGRRAPHIRLVLYPVPVQGDGAA 195 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 ++IA + + E D++++ RGGGSIEDLW FN+E++ RAIA +IP +S I Sbjct: 196 EKIARMLTVASDRAE------CDVLLICRGGGSIEDLWSFNEEIVARAIAACAIPTVSGI 249 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+ +DLRAPTPT AAE+A ++ +L II RL+ + T Sbjct: 250 GHETDFTIADFVSDLRAPTPTAAAEVATRTHRDWMDAIGIHAGKLQYIIKRLLHNAMQTA 309 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 ++L K L + R +L+ L L+H ++ +H+ +KS + Sbjct: 310 DNLAKRLISPATHTERERIKLNALTARLKHVSSNLLVASRYELSHLNTCLKSRLP--DTV 367 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R + + + + Q + ++L R+ T Sbjct: 368 QLRTDLANQSKQLSQGMS--------------SLLAHRRQST------------------ 395 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 F+L +++ + + TL+RGY + DT I L + + + Sbjct: 396 -FLLDSQLE--------------LLSPERTLERGYAIMTDTRGQIIRSPEQLPVRKPVSV 440 Query: 488 NFFDGQANAIVINKAP 503 G A + + P Sbjct: 441 QLAKGSAKISIESVQP 456 >gi|194016883|ref|ZP_03055496.1| exodeoxyribonuclease VII, large subunit [Bacillus pumilus ATCC 7061] gi|194011489|gb|EDW21058.1| exodeoxyribonuclease VII, large subunit [Bacillus pumilus ATCC 7061] Length = 448 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 140/492 (28%), Positives = 235/492 (47%), Gaps = 60/492 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+ L+ ++K V+ +L + ++GE+S + IHS GH YF+LKD ++R+ A++++ + Sbjct: 8 TVTALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHSRGHVYFTLKDENARMQAVMFQRSA 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K+ F P+ G++ V G I + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 AKLPFSPKSGMKVFVRGGIQVYEPSGNYQLYAKEMQPDGVGALHLAYEELKKKLASEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 ++K PIP P+++ VITSPTGA +RD++ I+ R+ ++I+ P VQG+ + I Sbjct: 127 DARYKKPIPEYPEVVGVITSPTGAAVRDVITTINRRYQQAKIIVLPALVQGEHATRSIVE 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +KE D++I+ RGGGSIE+LW FN+E + RAI S IPIISA+GHETD Sbjct: 187 ------RIKEANEKQLCDVLIVGRGGGSIEELWAFNEEAVARAIFASDIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RAPTPTGAAE+AVP L + +++ RL + + L +L Sbjct: 241 FTISDFTADMRAPTPTGAAELAVPSTTDLIERIKSIDIRLTRAVKNRTSQAKDRLVALQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + D + + L I K + R+K + + + Sbjct: 301 SYAFRFPKRLQEQKEQQFDLVFDRFQKQLSRQIELKRSQLDRQTYRLKPLHPKEQLLQAK 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + ++ I Sbjct: 361 KRHANETEQLIRSMNVQMKTI--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + ++RGY+ + I + T+ ++ I Sbjct: 382 --------HSQFQSVLGKLNALNPLQVMERGYSLAYKED-ELIKSVNQVETQDQLTITMK 432 Query: 491 DGQANAIVINKA 502 DG+ VI K Sbjct: 433 DGRLICEVIEKE 444 >gi|157692929|ref|YP_001487391.1| exodeoxyribonuclease VII large subunit [Bacillus pumilus SAFR-032] gi|166919631|sp|A8FF14|EX7L_BACP2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157681687|gb|ABV62831.1| exodeoxyribonuclease VII large subunit [Bacillus pumilus SAFR-032] Length = 448 Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 236/492 (47%), Gaps = 60/492 (12%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+ L+ ++K V+ +L + ++GE+S + IHS GH YF+LKD ++R+ A++++ + Sbjct: 8 TVTALTKYIKRKFDVDPHLEDIWIKGELSNVK-IHSRGHVYFTLKDENARMQAVMFQRSA 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K+ F P+ G++ V G I + S YQ+ + + P G G L A E+ KKKL EGLF Sbjct: 67 AKLPFSPKSGMKVFVRGGIQVYEPSGNYQLYAKEMQPDGVGALHLAYEELKKKLASEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 ++K PIP P+++ VITSPTGA +RD++ I+ R+ ++I+ P VQG+ + I Sbjct: 127 DARYKKPIPEYPEVVGVITSPTGAAVRDVITTINRRYQQAKIIVLPALVQGEHATRSIVE 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +KE D++I+ RGGGSIE+LW FN+E + RAI S IPIISA+GHETD Sbjct: 187 ------RIKEANEKQLCDVLIVGRGGGSIEELWAFNEEAVARAIFASDIPIISAVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ AD+RAPTPTGAAE+AVP L + +++ RL + + L +L Sbjct: 241 FTISDFTADMRAPTPTGAAELAVPSTTDLIERIKSIDIRLTRAVKNQTSQAKDRLLALQS 300 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + + D + + L I +K + R+K + + + Sbjct: 301 SYAFRFPKRLQEQKEQQFDLVFDRFQKQLTRQIEQKRSQLDRQTYRLKPLHPKEQLLQAK 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + ++ I Sbjct: 361 KRHANETEQLIRSMNVQMKTI--------------------------------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 H+ L + ++RGY+ + I + TK ++ I Sbjct: 382 --------HSQFQSVLGKLNALNPLQVMERGYSLAYKED-ELIKSVNQVETKDQLTITMK 432 Query: 491 DGQANAIVINKA 502 DG+ VI K Sbjct: 433 DGRLICEVIEKE 444 >gi|227524629|ref|ZP_03954678.1| exodeoxyribonuclease VII large subunit [Lactobacillus hilgardii ATCC 8290] gi|227088113|gb|EEI23425.1| exodeoxyribonuclease VII large subunit [Lactobacillus hilgardii ATCC 8290] Length = 452 Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats. Identities = 163/502 (32%), Positives = 258/502 (51%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV+ L+ ++K V+ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTTEYLSVTALTKYIKRKFDVDPYLMKVYLTGEISNFRLRPNA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K N+I+F+PEEG++ LV G I+ + S YQI ++S+ P G G L A E+ KK+L Sbjct: 60 MFKSAFNRIKFVPEEGMKVLVTGHISVYEPSGSYQIYVDSMEPDGVGQLYQAYEQLKKRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLFS + + F PK IAV+TSP+GAV+RDI+ + R+P+ ++++FP VQGDE Sbjct: 120 DKEGLFSQPKRQLVQF-PKRIAVVTSPSGAVVRDIITTVRRRYPIAQIVLFPALVQGDEA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I+++N L D +I+ RGGGSIEDLW FN+E + RAI+ S+IP+IS+ Sbjct: 179 STDIVRQIVKVNQLGH------FDTLIIGRGGGSIEDLWPFNEENVARAISASTIPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVP + + L + R+ N +LI+ Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVELKTTQNRIINAEYQLIEQAKLR 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + + + +LD L + LE+ + + + + + + R++ + Sbjct: 293 LKRLQQSTVFTSPQRIYETFSQKLDLLRQRLENQADKVTASRKNNLSQLHMRLRLVAPTY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I++ +Q + Q ++Q Sbjct: 353 MIKEQKQRLNVLQLRLKQ------------------------------------------ 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + L + L RGYT D N++FI++ +L K Sbjct: 371 -----SQLQNLNKVKQQYLMLVGSLDHLSPLKILGRGYTYTTDENDHFISKMADLKAK-T 424 Query: 485 ILINFFDGQANAIVINKAPPKE 506 I ++F DG NA + KE Sbjct: 425 INVHFSDGVINASINKMTKGKE 446 >gi|259503555|ref|ZP_05746457.1| exodeoxyribonuclease VII [Lactobacillus antri DSM 16041] gi|259168468|gb|EEW52963.1| exodeoxyribonuclease VII [Lactobacillus antri DSM 16041] Length = 449 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 144/500 (28%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +VS+L+ +LK + + L V + GE+S +R SGH YFSLKD+H+ IDA+++ Sbjct: 4 SKYLTVSQLTKYLKLKFDRDPYLQTVYLTGELSNFRLR--SGHQYFSLKDDHAVIDAVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G +K++F PEEG++ V G + + S +YQI I+++ P G G+L A E+ KKKL Sbjct: 62 RGQFSKVKFTPEEGMKLCVTGHVGLYERSGRYQIYIDTMEPDGIGSLYLAFEQLKKKLSA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLFS K P+P P+ IAV+TS GAVIRDI + R+P+ +V++FP VQG++ Sbjct: 122 EGLFSRPKK-PVPLFPRRIAVVTSLNGAVIRDINTTVRRRYPIAQVVLFPTVVQGEKAAA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA I + D +I+ RGGGSIEDLW FN+E++ RAIA+ +P+IS++G Sbjct: 181 DIARQIKR------AGERGDFDTLIIGRGGGSIEDLWPFNEEVVARAIADCPLPVISSVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVP---VKEHLQSSLINLEARLNNIIIRLIKYKIN 305 HETD T+AD AD RA TPT AAE+A P + K Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPQRLDNTLMLIGDFQRRLYNTLRAQIDFDRKQL 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + + ++D+L ++L + + + NR+ + Sbjct: 295 AKLTGSYIFQQPTRLYENYAQKVDQLTQQLRQQQDNRLTSAANDVAQLENRLLAYNPQRL 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + +++ + + ++ V+ ++ + + + Sbjct: 355 VDQDQLTVQQLTARLQTAVQARVQQVSQQLQ----------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 T+ L S ++RGYT + + + Q LA + Sbjct: 386 ------------------ALTKQLHSLDPLKIMERGYTYVT-KDGKVVNQAAQLAPGEPL 426 Query: 486 LINFFDGQANAIVINKAPPK 505 L++F DG+ + K Sbjct: 427 LLHFADGEVTVTITKIKEKK 446 >gi|157804055|ref|YP_001492604.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] gi|166232363|sp|A8EZN6|EX7L_RICCK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157785318|gb|ABV73819.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] Length = 444 Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 174/489 (35%), Positives = 261/489 (53%), Gaps = 54/489 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + E+SVSE+S +K ++E+N ++ ++GEISG++ I SSGHAYF+LK+N + + Sbjct: 8 NQATKEFSVSEISNKIKELLENNFGYIKIKGEISGFK-IASSGHAYFNLKENTAILACTC 66 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+ TL KI+F ++G+E ++ GK++++ G+S+YQ+ +++L P+G GT+L L +RK +L Sbjct: 67 WRPTLAKIKFPLKDGMEVVISGKLSSYAGNSRYQLAVDNLQPAGLGTMLQILNERKTRLE 126 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF+ + PIPF+P I VITS TGAVI+DI+ RI RFP +II+PV VQG+ Sbjct: 127 KEGLFNK-RRIPIPFLPTRIGVITSITGAVIKDIIHRIRERFPTHIIIWPVSVQGENSGN 185 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+G Sbjct: 186 EIAAAIEGFNKLEEA---NKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N +LI Y + Sbjct: 243 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKVLLNNTKQLINYHEQNIA 302 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + K ++ + LD ++ ++K Sbjct: 303 NYDKIHRYLTNYINHRQQLLDETGF-------NLLDVLPCFIELQETKLKFCS------- 348 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R I Y + + Sbjct: 349 -----------------------------------KERINPAKIINYKTLELTHQTAYLS 373 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I Sbjct: 374 KSANNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGAMGNFLSSKITAADEKIFNIK 433 Query: 489 FFDGQANAI 497 F DG+ + Sbjct: 434 FSDGEIKVV 442 >gi|148244837|ref|YP_001219531.1| exodeoxyribonuclease VII large subunit [Candidatus Vesicomyosocius okutanii HA] gi|166232370|sp|A5CW49|EX7L_VESOH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|146326664|dbj|BAF61807.1| exodeoxyribonuclease VII large subunit [Candidatus Vesicomyosocius okutanii HA] Length = 466 Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats. Identities = 145/490 (29%), Positives = 231/490 (47%), Gaps = 33/490 (6%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y++S +E+N+ ++GEIS +SGH YFSLKDN ++ +++ Sbjct: 7 VYTISSFLSVCNKTIENNIPTCWLQGEISNLT-RPASGHWYFSLKDNTVQVRCALFRFNQ 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 I+F P+ GIE LV T + +Q++I+ + G G L A ++ KK L EGLF Sbjct: 66 RYIKFSPKNGIEVLVRVVPTLYEARGNFQLVIQQIEQIGIGNLNLAFKQLKKDLDNEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + HK P+P I VI+S TGAVI+DI++ ++ R+P ++++F VQG + K++ Sbjct: 126 DNIHKKPLPNTINTIGVISSSTGAVIQDIIKVLNNRYPFVKILLFDSIVQGQDSIKKL-- 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 N L + D+II+ARGGGS+EDLW FN+E++ RAI N+ PIISAIGHETD Sbjct: 184 ----TNALNIADQSGKCDVIIIARGGGSLEDLWAFNEEILARAIFNAKTPIISAIGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD +D+RAPTP+ AA + + L S+ L +L+ + + Y + LN L Sbjct: 240 TTIADLVSDIRAPTPSFAAMLVTSNRLELLSNTNKLYTQLHQSYRQTLHYYQSRLNQLKL 299 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + N ++ + +LD L L E I N + +K I I+ + Sbjct: 300 KISNPNKQIDYLNQKLDYLSINLTTRKESIFTLNNAKLNSLFTTLKQHSPIKTIKHAK-- 357 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 L+ L+ Q K I + + R++ I+ Sbjct: 358 -----------------------SLNQMSLNQLKYQIKQIINTNNNMLYLATERLQKIIM 394 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 +SI L + N L RG++ DT N ++ N+ I+ +G Sbjct: 395 ALTNKHKARLSIQANSLHYLSPLNILARGFSITSDTKNQVLSSVTNIKINQTIITQLDNG 454 Query: 493 QANAIVINKA 502 + + Sbjct: 455 ALYSNIEKIE 464 >gi|227510478|ref|ZP_03940527.1| exodeoxyribonuclease VII large subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190130|gb|EEI70197.1| exodeoxyribonuclease VII large subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 452 Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats. Identities = 167/502 (33%), Positives = 259/502 (51%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV+ L+ ++K V+ L V + GEIS +R H YFSLKD+H++I AI Sbjct: 1 MTTEYLSVTALTKYIKRKFDVDPYLMKVYLTGEISNFRLRPMR-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K N+I+F+PEEG++ LV G I+ + S YQI ++S+ P G G L A E+ KKKL Sbjct: 60 MFKSAFNRIKFVPEEGMKVLVTGHISVYEPSGSYQIYVDSMEPDGVGQLYQAYEQLKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLFS + + F PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQGDE Sbjct: 120 DKEGLFSQPKRQLVQF-PKRIAVVTSPSGAVIRDIITTVRRRYPIAQIVLFPALVQGDEA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I+++N L D +I+ RGGGSIEDLW FN+E + RAI++S+IP+IS+ Sbjct: 179 STDIVKQIVKVNQLGH------FDTLIIGRGGGSIEDLWPFNEENVARAISSSTIPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVP + + L + R+ N +LI+ Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPRLDQVLVELKATQNRIINAEYQLIEQAKLR 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + + + +LD L + LE+ + I + + + + R++ + Sbjct: 293 LKRLQQSTVFTSPQRIYETFSQKLDLLRQRLENQADKITTSRKNNLSQLHMRLRLVAPTY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I++ +Q + Q ++Q Q+ Sbjct: 353 MIKEQKQRLNVLQLRLKQNQLQN------------------------------------- 375 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + L + L RGYT D N++FI++ +L K Sbjct: 376 ----------LNKVKQQYQMLVGSLDHLSPLKILGRGYTYTTDENDHFISKMADLKAK-T 424 Query: 485 ILINFFDGQANAIVINKAPPKE 506 I ++F DG NA + KE Sbjct: 425 INVHFSDGVINASINKMTKGKE 446 >gi|332686258|ref|YP_004456032.1| exodeoxyribonuclease VII large subunit [Melissococcus plutonius ATCC 35311] gi|332370267|dbj|BAK21223.1| exodeoxyribonuclease VII large subunit [Melissococcus plutonius ATCC 35311] Length = 448 Score = 337 bits (863), Expect = 4e-90, Method: Composition-based stats. Identities = 150/503 (29%), Positives = 248/503 (49%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L + + GEIS +R ++ H YFSLKD+ ++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRIYLTGEISNFRLRVNA-HQYFSLKDDGAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ LV+G+I+ + + YQI I+ + P G G L AL + K+KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVLVVGRISLYENNGAYQIYIDHMEPDGIGALYQALAELKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF+ + +P PK IAVITSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 AKEGLFNKVKRK-LPLYPKRIAVITSPSGAVIRDIITTVHRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D IIL RGGGSIEDLW FN+E + RAI S IPIIS+ Sbjct: 179 ADDIVRNIER------AEKIGNFDTIILGRGGGSIEDLWPFNEESVARAIYQSKIPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAEMAVPV + + RL + L++ + Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAEMAVPVLSEELLKIKERQERLAQAFLYLVQQQEEH 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LD++ + L+ E I +K I+N++ ++ Sbjct: 293 FKHLKNSYVFKQPERLYEGQTLKLDQVTQRLQQLAEAIYHQKQLQTQSILNQLYQQAPLN 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I++ +Q+ +++ +Q Sbjct: 353 QIKEKKQYTSFLNKNLTTATQQ-------------------------------------- 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K + L + + RGY+ N I + + + Sbjct: 375 ---------IVKDKRKQFISLVQQLDLLSPLKIMGRGYSYTT-KNEKVIRSAQEVKVADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A+V +K +++ Sbjct: 425 LTIHYTDGMVKAVVESKTSLEKE 447 >gi|295677491|ref|YP_003606015.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1002] gi|295437334|gb|ADG16504.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1002] Length = 459 Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats. Identities = 137/509 (26%), Positives = 235/509 (46%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 MNP + S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 1 MNPENPFASAATPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD +++ ++++G EF+P EG V +T + + Q+ +E++ +G G L Sbjct: 60 IKDAQAQMRCVMFRGRAQYAEFMPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K +P P+ I ++TS A +RD+L +S R P + VI Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRALPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 ++P VQG ++A + +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 180 VYPAPVQGAGVSAKLAAMVETAGARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L + A L Sbjct: 234 IAESVIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVMLLRELDHRHATLARA 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L+ R L +L L + F+ + Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLRVRLASAGARPVRDARARFSLLQM 353 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R + ++ R + Q + + + Sbjct: 354 RWQRWRP--DLAGERTRVDTLAQRLNAALSRQHERQV----------------------- 388 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFIT 474 + + + L+ + + TL+RGY ++ D + I Sbjct: 389 ------------------------ARICMLSARLEVLSPQRTLERGYAAVLDTQSGRAIR 424 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + Sbjct: 425 TPSSLKPGRRLTMHLAEGSADVALADVQA 453 >gi|293606238|ref|ZP_06688601.1| exodeoxyribonuclease VII [Achromobacter piechaudii ATCC 43553] gi|292815385|gb|EFF74503.1| exodeoxyribonuclease VII [Achromobacter piechaudii ATCC 43553] Length = 455 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 114/484 (23%), Positives = 213/484 (44%), Gaps = 57/484 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 N+ +V++L+ + ++E ++ + VRGEIS + +SGH YF+LKD+ + + A Sbjct: 9 NNAFTRDILTVAQLNQAVGQLLERSIPALWVRGEISNFT-QAASGHWYFTLKDSRASVRA 67 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++++ + + F+P+ G + + +++ + YQ+ +++ +G G L A + K++ Sbjct: 68 VMFRSRASAVGFVPKAGDQVEIRARVSLYEPRGDYQLQADAMRRAGLGNLYEAFLRLKEQ 127 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF K +P+ I VITS A +RD+L ++ R P + +II+P VQG + Sbjct: 128 LASEGLFDPARKREPVRLPRAIGVITSLHAAALRDVLSALARRAPQVPIIIYPAPVQGAD 187 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +A + N E D ++L RGGGSIEDLW FNDE + R +A S IP+IS Sbjct: 188 AASRLAAQVRLANARAE------VDTLLLVRGGGSIEDLWSFNDEDLARQVAASEIPVIS 241 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHETD+T+ D+ AD+RAPTPT AAE+A + L Sbjct: 242 GVGHETDFTIVDFVADVRAPTPTAAAELACVPRSELMG---------------------- 279 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 R+ + + + + + R + + ++ Sbjct: 280 ---------------------RVMQSAQAMVRGQQRRLERAAQRLDRASAQLV--SPSQR 316 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ ++ + + + + ++ +L + Sbjct: 317 LEHQQERLNSLRFRLASAWSGPQGR----RSARVNLLTQRLAHRVPDTGRAADRLAGAAR 372 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ + + ++ T L++ NTL RGY +D + + LA + Sbjct: 373 QLGQAHARLLVQGRNRLAAATAQLRALDPGNTLSRGYAIARDADGRIVRDAATLAAGQAL 432 Query: 486 LINF 489 ++F Sbjct: 433 DLSF 436 >gi|33593722|ref|NP_881366.1| exodeoxyribonuclease VII large subunit [Bordetella pertussis Tohama I] gi|81836223|sp|Q7VVB6|EX7L_BORPE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|33563795|emb|CAE43037.1| exodeoxyribonuclease large subunit [Bordetella pertussis Tohama I] gi|332383125|gb|AEE67972.1| exodeoxyribonuclease VII large subunit [Bordetella pertussis CS] Length = 463 Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats. Identities = 131/503 (26%), Positives = 218/503 (43%), Gaps = 57/503 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V++L+ + ++E ++ + VRGEIS + +SGH YF+LKD+ + + ++++ Sbjct: 16 ILTVAQLNQAVGQLLERSIPSLWVRGEISNFT-QAASGHWYFTLKDSRAAVRTVMFRSRA 74 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F+P G + V +++ + YQ+ + + +G G L A + K +L +EGLF Sbjct: 75 AQVGFVPRPGDQVEVRARVSLYEPRGDYQLQADGMRRAGVGNLYEAFLRLKAQLQDEGLF 134 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 Q K +P+ I V+TS A +RD+L ++ R P + VII+P VQG + +A Sbjct: 135 DPQRKRQPARLPRAIGVVTSLHAAALRDVLSALARRAPQVPVIIYPAPVQGADAAARLAA 194 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + Q N E D ++L RGGGSIEDLW FNDE + R +A S IP+IS +GHETD Sbjct: 195 RVAQANQRAE------VDTLLLVRGGGSIEDLWSFNDEALAREVAASDIPVISGVGHETD 248 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+ D+ ADLRAPTPT AAE+A + L ++L + L R + L+ Sbjct: 249 FTIVDFVADLRAPTPTAAAELACVPRGDLLAALRHTAEWLARAQQRRLDQAAQRLDRAAA 308 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + Q L+ + RL+ L L + + + R+ Sbjct: 309 MLTSPAQRLAHQQERLNTLRHRLASAWRGPQGHRVARLDMLAQRLAHRRP---------- 358 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 L+ ++ + Sbjct: 359 ---------------------------------------DTGRAAERSAALLAQLGRAQA 379 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + L++ ++TL RGY ++D +T LA + RI I G Sbjct: 380 RLAAARQARLDTLAAQLRALDPQHTLARGYAIVRDAAGAIVTDATRLAARDRIEIAVARG 439 Query: 493 QANAIVINKAPPKEQPTKKCQLH 515 + A V + P Sbjct: 440 RIGADVTDIGTPDGTDGNPALRR 462 >gi|229587029|ref|YP_002845530.1| exodeoxyribonuclease VII large subunit [Rickettsia africae ESF-5] gi|259646299|sp|C3PPC7|EX7L_RICAE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|228022079|gb|ACP53787.1| Exodeoxyribonuclease VII, large subunit [Rickettsia africae ESF-5] Length = 444 Score = 336 bits (861), Expect = 6e-90, Method: Composition-based stats. Identities = 179/487 (36%), Positives = 258/487 (52%), Gaps = 54/487 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 E+SVSE+S +K ++E+N ++ V+GEISG + I +SGHAYF+LK+N + + W+ Sbjct: 10 TTKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWR 68 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L +E Sbjct: 69 PILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKE 128 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EI Sbjct: 129 GLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEI 187 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 188 AEAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHE 244 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+TL D AAD RAPTPT AAE AVPV L ++L + E L N RLIKY + + Sbjct: 245 VDYTLIDLAADKRAPTPTAAAEFAVPVHSILNNTLQSYEKILLNNTSRLIKYHEQNIVNY 304 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 K ++ + LD L L I Sbjct: 305 NKIHRYLSHYINHRQQLLDETGFNLLDALPCFIEL------------------------- 339 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 ++ KI R I Y + + Sbjct: 340 ------------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKS 375 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F Sbjct: 376 ANNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFS 435 Query: 491 DGQANAI 497 DG+ + Sbjct: 436 DGEIKVV 442 >gi|323527165|ref|YP_004229318.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. CCGE1001] gi|323384167|gb|ADX56258.1| exodeoxyribonuclease VII, large subunit [Burkholderia sp. CCGE1001] Length = 459 Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats. Identities = 140/509 (27%), Positives = 237/509 (46%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 MN S S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 1 MNSDSPFTSSTMPGGEVVVPVSALNRAIGSMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD +++ ++++G EF P+EG V +T + + Q+ +E++ +G G L Sbjct: 60 IKDAQAQMRCVMFRGRAQYAEFTPKEGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K P P+ I ++TS A +RD+L +S R P + VI Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRAPPSHPRAIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 I+P VQG ++A + + +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 180 IYPAPVQGAGVSAKLAAMVDAASARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L + A L Sbjct: 234 IAASAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDHRHAALARG 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L+ R L +L L + F+ + Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSARLASAGARPVRDARARFSLLQM 353 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R + ++ ++ + Q ++ + + Sbjct: 354 RWQRWRP--DLAAHQARLGSLAQRLDAALLRQHERQAA---------------------- 389 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 I L R L+ + + TL+RGY ++ D + Sbjct: 390 ---RIATLSAR----------------------LEVLSPQRTLERGYAAVLDAQTGRAVR 424 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + P Sbjct: 425 APSSLKPGRRLTMHLAEGTADVALADVQP 453 >gi|227499082|ref|ZP_03929219.1| exodeoxyribonuclease VII large subunit [Acidaminococcus sp. D21] gi|226904531|gb|EEH90449.1| exodeoxyribonuclease VII large subunit [Acidaminococcus sp. D21] Length = 447 Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats. Identities = 148/495 (29%), Positives = 243/495 (49%), Gaps = 59/495 (11%) Query: 13 PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 ++VSE++ LK ++ + +++ ++GE+S +R ++SGH YF+LKD+ I +++K Sbjct: 5 KVFTVSEVNLSLKELIHKDPTFANLQIQGEVSNFR-RYASGHCYFNLKDSKGLIKCVMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G +++ LP +G + + IG+I + YQ ++ L+P G+G L+ A E K+KL E Sbjct: 64 GAAQRLKKLPRDGDQVVGIGRIDVYERDGVYQFYVDMLMPVGTGDLMAAYEALKQKLSAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189 GLF + K PIP P+I+ V+TS GA IRDI++ R +++ ++PVKVQG E P E Sbjct: 124 GLFDETRKQPIPVSPRIVGVVTSADGAAIRDIIKVAGRRDSSVKIRLYPVKVQGKEAPPE 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA I +N D++I+ RGGGS+EDLW FNDE +VRAIA S IPIISA+GH Sbjct: 184 IAAGIHFMNR------HNLCDVLIVGRGGGSMEDLWAFNDEKVVRAIAASRIPIISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+TL+D+AAD RA TP+ AAE AVP + +S L RL + + + L+ Sbjct: 238 EIDFTLSDFAADKRAATPSQAAEFAVPDRSKDIASYEKLNLRLKKAVADRLAMERQCLDG 297 Query: 310 LLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 +L+ ++ RLD+L + L + + R+ + + + Sbjct: 298 VLQRPVFRYPERLTEGQSQRLDQLGQSLSTSFSRRLERETMRLMKLRDHWFFRHPEVFVA 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 +++ H+ + + + H RY E ++++ + + + Sbjct: 358 RHQDHLT----RLTKDLDLHFRYTLSETQQRLKEVSVKFQ-------------------- 393 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + L+RGYT + ++ L I Sbjct: 394 -----------------------LLDPQKVLERGYTMTEGPGGKILSSMGTLKEGDTIKT 430 Query: 488 NFFDGQANAIVINKA 502 F DG +IV K Sbjct: 431 YFKDGVLRSIVSKKE 445 >gi|116492585|ref|YP_804320.1| exodeoxyribonuclease VII large subunit [Pediococcus pentosaceus ATCC 25745] gi|122265951|sp|Q03FZ4|EX7L_PEDPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|116102735|gb|ABJ67878.1| Exodeoxyribonuclease VII large subunit [Pediococcus pentosaceus ATCC 25745] Length = 447 Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats. Identities = 153/501 (30%), Positives = 248/501 (49%), Gaps = 61/501 (12%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +VS L+ ++K +++ L V + GEIS +R +S H YFSLKD +++I AI+ Sbjct: 3 EDKYLTVSALTNYIKRKFDADPYLHRVYLVGEISNFRLRTNS-HQYFSLKDENAKISAIM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +K K++F PEEG+ +V G+I+ +PG+ YQI ++S+ P G G L A E+ K KL Sbjct: 62 FKSAFAKVKFQPEEGMRVIVSGRISLYPGNGSYQIYVDSMQPDGVGALYQAYEQLKIKLS 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF PIP P+ IA++TSP+GAVIRDI+ +S R+P +++++FP VQG+E Sbjct: 122 QEGLFEAPK-LPIPKYPRKIAIVTSPSGAVIRDIITTVSRRYPIVQLVLFPALVQGNEAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 IA I +NTL D II+ RGGGSIEDLW FN+E++ RAI S +P+IS++ Sbjct: 181 NSIAAQIKMINTL------DDFDTIIIGRGGGSIEDLWPFNEEVVARAIFASKLPVISSV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD AD+RA TPT AAE+A PV + L L+ + ++K + + Sbjct: 235 GHETDTTIADLVADMRAATPTAAAELATPVLTDILEELQKLQLQTIVAFRNILKMRSQQV 294 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + + +D L +L + I F + +R+ ++ Sbjct: 295 QHLQQSYIFQEPQRLYEGYVQNVDILTEKLISLEKQQITTAEGSFKTLNSRLLANTPASR 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I+ +Q++ +Q Sbjct: 355 IKMAKQNVEHLRQMTNN------------------------------------------- 371 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++++ ++ L + + + RGYT + + + +L+ +I Sbjct: 372 ----NITNRFSKYANDLNSLIGSLDTLSPLKIMSRGYTYVTR-DTKVVKSIEDLSIDDKI 426 Query: 486 LINFFDGQANAIVINKAPPKE 506 +NF DG ANA++ + Sbjct: 427 QLNFSDGSANAVIKTINSEDK 447 >gi|254496307|ref|ZP_05109193.1| exonuclease VII, large subunit [Legionella drancourtii LLAP12] gi|254354468|gb|EET13117.1| exonuclease VII, large subunit [Legionella drancourtii LLAP12] Length = 445 Score = 335 bits (860), Expect = 8e-90, Method: Composition-based stats. Identities = 143/498 (28%), Positives = 230/498 (46%), Gaps = 57/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +VS+L+ +K +E+ L V V GEIS +SGH YF+LKD+ ++I + + Sbjct: 3 TQASILTVSQLNRQVKSYLENELGTVHVEGEISNL-SKPASGHFYFTLKDSGAQIRCVFF 61 Query: 70 KGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 K I +G + GK++ + YQ+IIE + +G G L E+ K KL Sbjct: 62 KNRHFGAIAAKLGDGQHIIASGKLSLYEARGDYQLIIEQVTEAGLGALYQRFEELKNKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 EGLF +K P+P +P+II VITS TGA IRDIL ++ RFPL +V+I+P +VQG Sbjct: 122 AEGLFQPSNKKPLPTMPQIIGVITSTTGAAIRDILSTLARRFPLAQVLIYPSEVQGAGAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 ++ A+ + N R D++ILARGGGSIEDLW FN+E + R IA+S IPI+S + Sbjct: 182 PQLIKALQRANK------DKRCDVLILARGGGSIEDLWAFNEEQLARQIADSLIPIVSGV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+ AD RA TPT AA P L L + RL+ + R+++ L Sbjct: 236 GHETDFTIADFVADYRAETPTAAATAVTPNSLELLKLLNHSIVRLHEAMHRIVQRNQIRL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + + + ++ D L R+L + + RK + +++ + I+ Sbjct: 296 QHLKDKISSPQKAIASYWQTTDYLERQLLSCMMHALQRKKHQLHLCTHQLNAQNPTTQIK 355 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + +L++ T I ++ + +L ++ Sbjct: 356 QAQ--------------------------------ILLQQITTQLIQNIYNKVNQLSYQL 383 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + L + + TL RGY + + +++ I + Sbjct: 384 K---------------GLLSTLHAVSPLATLDRGYAIATQKD-KVLFSSKHVQIGDLIDV 427 Query: 488 NFFDGQANAIVINKAPPK 505 G+ V Sbjct: 428 RLAQGKLTCEVTQTQSTS 445 >gi|254281708|ref|ZP_04956676.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium NOR51-B] gi|219677911|gb|EED34260.1| exodeoxyribonuclease VII, large subunit [gamma proteobacterium NOR51-B] Length = 449 Score = 335 bits (860), Expect = 9e-90, Method: Composition-based stats. Identities = 137/485 (28%), Positives = 228/485 (47%), Gaps = 50/485 (10%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 ++VSEL+ +K +++ + + V V GEIS + SSGH YFSLKD+ S++ +++ Sbjct: 7 FTVSELNGDVKTLLQDHYATVLVEGEISNFVA-ASSGHWYFSLKDDRSQVRCAMFRRANL 65 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ PE G + + ++ + ++Q+I E++ +G G L A E+ KK+L +EGLF Sbjct: 66 RVRPRPENGDQVTIRAAVSLYEARGEFQLICETMDAAGDGALQLAFERLKKRLADEGLFD 125 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEIANA 193 + K +P + V+TSPTGA I DI + R P+ V + PV VQG+ I+ A Sbjct: 126 PELKKAVPGDCATVGVVTSPTGAAIHDIQSVLERRSPMTAVYLLPVAVQGNGAAAAISAA 185 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I Q N L D +I+ RGGGS+EDLW FN+E + RAIA S+IP++SA+GHE D+ Sbjct: 186 IDQANRLVTAGQ-LSLDALIVGRGGGSLEDLWSFNEESVARAIAASAIPVVSAVGHEIDF 244 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++AD+AAD+RA TP+ AAE+ + L + A+LN ++ L L Sbjct: 245 SIADFAADIRAATPSAAAELVTTDQRERMQQLDAITAQLNRFMVGRTSQYREKLGHLRAR 304 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + RL L L ++ + K H + R+ + + Q +R+ + Sbjct: 305 LRHPSSQVRQQEARLTDLKTRLRRAIDAQLVAKNDHMRSLRLRLHRESPAYRAQISRKQV 364 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ Q + LI R Sbjct: 365 VDAGQR----------------------------------------MSLLIHRKLTSTKE 384 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 ++ R+LQS + TL RGY +Q + + ++ + + + + G Sbjct: 385 RLNQQR-------RLLQSLGPEGTLARGYAIVQTEDGAVVKRQNQVQSGQSLRVRLGSGN 437 Query: 494 ANAIV 498 + V Sbjct: 438 IDVAV 442 >gi|315171917|gb|EFU15934.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX1342] Length = 448 Score = 335 bits (860), Expect = 9e-90, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVAELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|239637667|ref|ZP_04678639.1| exodeoxyribonuclease VII, large subunit [Staphylococcus warneri L37603] gi|239596885|gb|EEQ79410.1| exodeoxyribonuclease VII, large subunit [Staphylococcus warneri L37603] Length = 445 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 149/492 (30%), Positives = 237/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LTVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLSKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F + +K IP PK IAV+T+ TGA IRDI I+ R+P + I VQG + +I Sbjct: 124 FDNSNKKTIPRFPKKIAVLTASTGAAIRDIHSTINSRYPLVEQIQISTLVQGQQAKADII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + L D II+ RGGGSIEDLW+FN+E +V+AI PIISA+GHET Sbjct: 184 EKIKYADQL-------DVDTIIVGRGGGSIEDLWNFNEEEVVKAIFECQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA MA P + L + + L I + ++ L L Sbjct: 237 DFTLSDFVADVRAATPTQAAVMATPDQYELLQQIKQYQFTLTRHIKQYVEQHKKHLEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L ++L L + ++ + + R L +I +N Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLNQKLTSKLEQQQHQLSILKQRFNPKHLESSIIRN 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q + + + Q I +++ + Sbjct: 357 QQQNGQLKSRLTQ------------------------------------KINNDLSQYKN 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L KI+ L + NT+ RGY + + +N +T ++++ I++ Sbjct: 381 ALKSKIEQ-----------LNQLSPTNTMLRGYAIV-NKEDNVVTSTKDMSENDEIVLTM 428 Query: 490 FDGQANAIVINK 501 DGQ +AIV Sbjct: 429 KDGQIDAIVKKV 440 >gi|163856980|ref|YP_001631278.1| exodeoxyribonuclease VII large subunit [Bordetella petrii DSM 12804] gi|163260708|emb|CAP43010.1| exodeoxyribonuclease large subunit [Bordetella petrii] Length = 435 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 124/490 (25%), Positives = 212/490 (43%), Gaps = 57/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +V++L+ + ++E N+ + VRGEIS + +SGH YF+LKD+ + + A++++G Sbjct: 2 TVAQLNQAVGQLLERNIPSLWVRGEISNFT-QAASGHWYFTLKDSRAAVRAVMFRGRAAA 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F+P G + V +++ + YQ+ E++ +G G L A + K +L EEGLF Sbjct: 61 VGFVPRAGDQVEVRARVSLYEPRGDYQLQAEAMRRAGLGNLYEAFLRLKAQLAEEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 K +P+ I VITS A +RD+L ++ R P + V+++P VQG + +A + Sbjct: 121 AVKRTPVALPRAIGVITSLHAAALRDVLSALARRAPQVPVLVYPAPVQGADAAARLAVQL 180 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D ++L RGGGSIEDLW FNDE + R +A S+IP+IS +GHETD+T Sbjct: 181 QVANARQE------VDTLLLVRGGGSIEDLWSFNDESLARLVAASAIPVISGVGHETDFT 234 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ AD+RAPTPT AAE+A + L + RL R ++ L+ L Sbjct: 235 IVDFVADVRAPTPTAAAELACVPRADLLGQVEQAARRLARAQQRRLELAAQRLDRAAAQL 294 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + + Sbjct: 295 ---------------------------------------------VSPARRLAHQAERLN 309 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + + +I +L + + L R+ + + Sbjct: 310 TLRHRLAGAWNGPQGR----RNARIGLLAQRLAHATPDLGRASERLAALARRLGQAQARQ 365 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 + L++ ++TL RGY ++D + +LA + F G A Sbjct: 366 LAVRKARAEAVAAHLRALDPQHTLARGYAIVRDAQGRIVRDGSSLARAQELDATFAQGGA 425 Query: 495 NAIVINKAPP 504 V++ Sbjct: 426 RVQVLDPRSS 435 >gi|255506909|ref|ZP_05382548.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis D(s)2923] Length = 516 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 251/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL +++ + I K N L Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRSALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + + Q R+ Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508 >gi|187925169|ref|YP_001896811.1| exodeoxyribonuclease VII large subunit [Burkholderia phytofirmans PsJN] gi|187716363|gb|ACD17587.1| exodeoxyribonuclease VII, large subunit [Burkholderia phytofirmans PsJN] Length = 459 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 140/509 (27%), Positives = 235/509 (46%), Gaps = 62/509 (12%) Query: 1 MNPFSQKNSLDHP----EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 MNP S S P VS L+ + ++E + V V GE+S + +SGH YFS Sbjct: 1 MNPESPFFSSAAPGGEVVVPVSALNRAIGTMLERSFPLVWVAGEVSNFT-RAASGHWYFS 59 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +KD +++ ++++G EF P EG V +T + + Q+ +E++ +G G L Sbjct: 60 IKDAQAQMRCVMFRGRAQYAEFTPREGDRIEVRALVTMYEPRGELQLNVEAVRRTGQGRL 119 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K +L EGLF+ + K +P P+ I ++TS A +RD+L +S R P + VI Sbjct: 120 YEAFLRLKAQLEAEGLFAAERKRALPSHPRSIGIVTSLQAAALRDVLTTLSRRAPHIPVI 179 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 ++P VQG ++A + N +E D++I+ RGGGSIEDLW FN+E++ RA Sbjct: 180 VYPAPVQGVGVSSKLAAMVDAANARRE------VDVLIVCRGGGSIEDLWAFNEEVLARA 233 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA S+IP++S +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L A L Sbjct: 234 IAESAIPVVSGVGHETDFTIADFAADVRAPTPTGAAELVSPQRVLLLRELDQRHATLARG 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R+++ + L+ L + L + + L+ R L +L L F+ + Sbjct: 294 FGRMMERRAQQLDWLARRLVSPAERLARQRTHLQQLSVRLASAGARPARDARARFSLLQM 353 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R + ++ ++ + Q ++ + + Sbjct: 354 RWQRWRP--DLAGHQVKLGNLSQRLDAALLRQH-------------------------ER 386 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 I L R L+ + + TL+RGY ++ D + Sbjct: 387 QTARIDTLAAR----------------------LEVLSPQRTLERGYAAVLDAQSGRAVR 424 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAP 503 +L R+ ++ +G A+ + + Sbjct: 425 APSSLKPGRRLTVHLAEGAADIALADVQA 453 >gi|76789053|ref|YP_328139.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis A/HAR-13] gi|237802752|ref|YP_002887946.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis B/Jali20/OT] gi|237804674|ref|YP_002888828.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis B/TZ1A828/OT] gi|255348691|ref|ZP_05380698.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 70] gi|255503231|ref|ZP_05381621.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 70s] gi|123772407|sp|Q3KM31|EX7L_CHLTA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|76167583|gb|AAX50591.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis A/HAR-13] gi|231272974|emb|CAX09886.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis B/TZ1A828/OT] gi|231273986|emb|CAX10779.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis B/Jali20/OT] gi|296435846|gb|ADH18020.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis G/9768] gi|296437706|gb|ADH19867.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis G/11074] gi|297140205|gb|ADH96963.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis G/9301] Length = 516 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 251/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL +++ + I K N L Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + + Q R+ Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508 >gi|308274745|emb|CBX31344.1| Exodeoxyribonuclease 7 large subunit [uncultured Desulfobacterium sp.] Length = 447 Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats. Identities = 155/494 (31%), Positives = 239/494 (48%), Gaps = 56/494 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 ++ YSV+EL+ LK+++E V V G+IS SGH YF+LKD +RI+AII+ Sbjct: 1 MEIKIYSVTELTSELKNLIEEKYPLVWVFGQISNLST-PFSGHFYFTLKDESARINAIIF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++F PE G+ + G++ + YQ+I E L P G G+L A E+ K KL Sbjct: 60 KGQRKNLKFTPENGMSVIGFGRLGLYETKGSYQVIFEYLEPKGIGSLQIAYEQLKAKLSS 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++K +PF+P+ I +ITSPTG+V+ DI+ IS R+P + + I PV VQG Sbjct: 120 EGLFDSKYKKKLPFLPENICIITSPTGSVLYDIINIISRRYPSVNLKIIPVSVQGIFSEN 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI +AI LN D+ I+ARGGGS+E+L FN E + RAI S IPIISAIG Sbjct: 180 EIVSAIKLLNKYCCS------DVAIIARGGGSLEELHAFNSESVARAIFESKIPIISAIG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T++D+ +D RAPTP+ AAE+ VP+K L L L + + +++ N LN Sbjct: 234 HETDYTISDFVSDYRAPTPSAAAEIVVPLKNDLLIKNQKLYLSLKSGMEKILNNHRNNLN 293 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + K + + L + D L + L + I + I+++ ++ + Sbjct: 294 KISKRIKDPKSKLYDLILKNDDLTKRLVRSEINYINQLKERTVWKIDKLNNNNPLR---- 349 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 I + +K ++T + Sbjct: 350 -------------------------------------------YILIYNDKVKIIVTNLY 366 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487 ++ K+ + ++ + L K LKRGY+ + IT N+ +I + Sbjct: 367 KSINIKLNNSKNKLNEFSAKLSVLNPKGILKRGYSIARTIPGKNIITDSNNVEIAQQIEV 426 Query: 488 NFFDGQANAIVINK 501 +G V K Sbjct: 427 IVNEGSLICRVERK 440 >gi|33597151|ref|NP_884794.1| exodeoxyribonuclease VII large subunit [Bordetella parapertussis 12822] gi|33600996|ref|NP_888556.1| exodeoxyribonuclease VII large subunit [Bordetella bronchiseptica RB50] gi|81836603|sp|Q7W7F4|EX7L_BORPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|81837027|sp|Q7WKU2|EX7L_BORBR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|33566602|emb|CAE37860.1| exodeoxyribonuclease large subunit [Bordetella parapertussis] gi|33575431|emb|CAE32508.1| exodeoxyribonuclease large subunit [Bordetella bronchiseptica RB50] Length = 463 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 133/503 (26%), Positives = 220/503 (43%), Gaps = 57/503 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V++L+ + ++E ++ + VRGEIS + +SGH YF+LKD+ + + ++++ Sbjct: 16 ILTVAQLNQAVGQLLERSIPSLWVRGEISNFT-QAASGHWYFTLKDSRAAVRTVMFRSRA 74 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F+P G + V +++ + YQ+ + + +G G L A + K +L +EGLF Sbjct: 75 AQVGFVPRPGDQVEVRARVSLYEPRGDYQLQADGMRRAGVGNLYEAFLRLKAQLQDEGLF 134 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 Q K +P+ I V+TS A +RD+L ++ R P + VII+P VQG + +A Sbjct: 135 DPQRKRQPARLPRAIGVVTSLHAAALRDVLSALARRAPQVPVIIYPAPVQGADAAARLAA 194 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + Q N E D ++L RGGGSIEDLW FNDE + R +A S IP+IS +GHETD Sbjct: 195 RVAQANQRAE------VDTLLLVRGGGSIEDLWSFNDEALAREVAASDIPVISGVGHETD 248 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+ D+ ADLRAPTPT AAE+A + L ++L + RL R + L+ Sbjct: 249 FTIVDFVADLRAPTPTAAAELACVPRGDLLAALRHTAERLARAQQRRLDQAAQRLDRAAA 308 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + Q L+ + RL+ L L R+ + + R+ Sbjct: 309 MLTSPAQRLAHQQERLNTLRHRLASAWRGPQGRRVARLDMLAQRLAHRRP---------- 358 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 L+ ++ + Sbjct: 359 ---------------------------------------DTGRAAERSAALLAQLGRAQA 379 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + L++ ++TL RGY ++D +T LA + RI I G Sbjct: 380 RLAAARQARLDTLAAQLRALDPQHTLARGYAIVRDAAGAIVTDATRLAARDRIEIAVARG 439 Query: 493 QANAIVINKAPPKEQPTKKCQLH 515 + A V + P Sbjct: 440 RIGADVTDIGTPDGTDGNPALRR 462 >gi|157964823|ref|YP_001499647.1| exodeoxyribonuclease VII large subunit [Rickettsia massiliae MTU5] gi|157844599|gb|ABV85100.1| Exodeoxyribonuclease VII, large subunit [Rickettsia massiliae MTU5] Length = 458 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 179/486 (36%), Positives = 258/486 (53%), Gaps = 54/486 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E+SVSE+S +K ++E+N ++ V+GEISG + I SSGHAYF+LK+N + + W+ Sbjct: 25 TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTCWRP 83 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L +EG Sbjct: 84 ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKEG 143 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EIA Sbjct: 144 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 202 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI + L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 203 EAIEGFHNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 259 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 260 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYD 319 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 K ++ + LD L L I Sbjct: 320 KIHRYLSHYINNRQQLLDETGFNLLDALPYFIEL-------------------------- 353 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + KI R I Y + + Sbjct: 354 -----------------------QDTKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 390 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F D Sbjct: 391 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 450 Query: 492 GQANAI 497 G+ + Sbjct: 451 GEIKVV 456 >gi|118595125|ref|ZP_01552472.1| xseA; exodeoxyribonuclease vII large subunit protein [Methylophilales bacterium HTCC2181] gi|118440903|gb|EAV47530.1| xseA; exodeoxyribonuclease vII large subunit protein [Methylophilales bacterium HTCC2181] Length = 452 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 240/495 (48%), Gaps = 57/495 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + +SVSEL+ +K+I+ + S V ++GE+SG+ SSGH YF LKDN +++D +++ Sbjct: 14 NKIFSVSELNRLVKNILNTTFSLVWIKGEVSGFSSY-SSGHWYFKLKDNTAQVDCVMFAR 72 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++++ P+ G + +++ + + KYQ+IIE++ +G G L K KL + G Sbjct: 73 KNQQLQWQPKNGDFLELQCQVSLYEANGKYQLIIETMQKAGLGELFEKYIDLKNKLEQAG 132 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190 LF++ K +P P++I VITS GA +RD+L + R + +II+P VQG I Sbjct: 133 LFNEATKKLLPRFPRVIGVITSSDGAALRDVLSTLLRRNRSVSIIIYPTLVQGAAATSGI 192 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 NAI + N E D +I+ RGGGSIEDLW FN E + AI NS +P+ISA+GHE Sbjct: 193 CNAITKANERNE------VDALIICRGGGSIEDLWSFNTESVAYAIFNSILPVISAVGHE 246 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ AD RAPTPT AAE+ + S++ + + R I+ LN L Sbjct: 247 TDFTIADFVADTRAPTPTAAAEIISEGSNQILSTIDVYLNSMTKMFERKIEQSQLKLNFL 306 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + L + Q ++ + L + + N+ + I ++ IQ+ + Sbjct: 307 ERRLISPIQRIAGQKDLLKSYEKRMLLNINAKLESYRNKITRTIIQLPP--PKQLIQEKK 364 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I ++ +E T+++I + I + + Sbjct: 365 EQIDTLRRRLE-------------------------INTRSQITSYSSKILSIKKNLLM- 398 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 K+ LKRGY+ +QD + + +N++ I+I F Sbjct: 399 ---------------------LNPKSILKRGYSIVQDVDEKILRDTKNISVDDNIVITFH 437 Query: 491 DGQANAIVINKAPPK 505 +G A A++ K K Sbjct: 438 NGYAKAMITEKNSKK 452 >gi|255974046|ref|ZP_05424632.1| exonuclease VII [Enterococcus faecalis T2] gi|307278971|ref|ZP_07560030.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0860] gi|255966918|gb|EET97540.1| exonuclease VII [Enterococcus faecalis T2] gi|306504358|gb|EFM73569.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0860] Length = 448 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHKKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|312900450|ref|ZP_07759757.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0470] gi|311292426|gb|EFQ70982.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0470] Length = 448 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 146/503 (29%), Positives = 245/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHATTTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ I + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYITKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|239947021|ref|ZP_04698774.1| exodeoxyribonuclease VII, large subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239921297|gb|EER21321.1| exodeoxyribonuclease VII, large subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 487 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 176/489 (35%), Positives = 257/489 (52%), Gaps = 54/489 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + E+SVSE+S +K ++E+N ++ V+GEISG + I SSGHAYF+LK+N + + Sbjct: 51 NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 109 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+ L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L Sbjct: 110 WRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLRPAGLGAMLQILNERKARLE 169 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF+ + PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ Sbjct: 170 KEGLFNKKR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGN 228 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA AI N L+E +P +II+ARGGGSIEDLW FNDE++VR NS IPIISA+G Sbjct: 229 EIARAIEGFNNLEE---INKPSVIIVARGGGSIEDLWSFNDEILVRTAYNSKIPIISAVG 285 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + Sbjct: 286 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIV 345 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + K ++ + LD L L I + Sbjct: 346 NYDKIYRYLSHYINNRQQLLDETGFNLLDALPCFIELQGTKLKSFSK------------- 392 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R + Y + + Sbjct: 393 ------------------------------------ERVNPAKILNYKTLELTHQTAYLS 416 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I Sbjct: 417 KSANNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIK 476 Query: 489 FFDGQANAI 497 F DG+ + Sbjct: 477 FSDGEIKVV 485 >gi|227517902|ref|ZP_03947951.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis TX0104] gi|229546826|ref|ZP_04435551.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis TX1322] gi|229548920|ref|ZP_04437645.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis ATCC 29200] gi|255971433|ref|ZP_05422019.1| exonuclease VII [Enterococcus faecalis T1] gi|256617902|ref|ZP_05474748.1| exonuclease VII [Enterococcus faecalis ATCC 4200] gi|256761735|ref|ZP_05502315.1| exonuclease VII [Enterococcus faecalis T3] gi|256852632|ref|ZP_05558003.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T8] gi|256957071|ref|ZP_05561242.1| exonuclease VII [Enterococcus faecalis DS5] gi|256962596|ref|ZP_05566767.1| exonuclease VII [Enterococcus faecalis HIP11704] gi|257077867|ref|ZP_05572228.1| exonuclease VII [Enterococcus faecalis JH1] gi|257083888|ref|ZP_05578249.1| exonuclease VII [Enterococcus faecalis Fly1] gi|257089388|ref|ZP_05583749.1| exonuclease VII large subunit [Enterococcus faecalis CH188] gi|257415597|ref|ZP_05592591.1| exonuclease VII [Enterococcus faecalis AR01/DG] gi|257418570|ref|ZP_05595564.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T11] gi|257421228|ref|ZP_05598218.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis X98] gi|294780569|ref|ZP_06745932.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis PC1.1] gi|300859769|ref|ZP_07105857.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TUSoD Ef11] gi|307268060|ref|ZP_07549448.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX4248] gi|307271990|ref|ZP_07553257.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0855] gi|307289418|ref|ZP_07569372.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0109] gi|312904542|ref|ZP_07763700.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0635] gi|312952748|ref|ZP_07771610.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0102] gi|227074656|gb|EEI12619.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis TX0104] gi|229305941|gb|EEN71937.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis ATCC 29200] gi|229307991|gb|EEN73978.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis TX1322] gi|255962451|gb|EET94927.1| exonuclease VII [Enterococcus faecalis T1] gi|256597429|gb|EEU16605.1| exonuclease VII [Enterococcus faecalis ATCC 4200] gi|256682986|gb|EEU22681.1| exonuclease VII [Enterococcus faecalis T3] gi|256711977|gb|EEU27014.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T8] gi|256947567|gb|EEU64199.1| exonuclease VII [Enterococcus faecalis DS5] gi|256953092|gb|EEU69724.1| exonuclease VII [Enterococcus faecalis HIP11704] gi|256985897|gb|EEU73199.1| exonuclease VII [Enterococcus faecalis JH1] gi|256991918|gb|EEU79220.1| exonuclease VII [Enterococcus faecalis Fly1] gi|256998200|gb|EEU84720.1| exonuclease VII large subunit [Enterococcus faecalis CH188] gi|257157425|gb|EEU87385.1| exonuclease VII [Enterococcus faecalis ARO1/DG] gi|257160398|gb|EEU90358.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis T11] gi|257163052|gb|EEU93012.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis X98] gi|294452396|gb|EFG20835.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis PC1.1] gi|295113843|emb|CBL32480.1| Exodeoxyribonuclease VII large subunit [Enterococcus sp. 7L76] gi|300850587|gb|EFK78336.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TUSoD Ef11] gi|306499673|gb|EFM69036.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0109] gi|306511337|gb|EFM80340.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0855] gi|306515701|gb|EFM84228.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX4248] gi|310629264|gb|EFQ12547.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0102] gi|310632055|gb|EFQ15338.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0635] gi|315029669|gb|EFT41601.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX4000] gi|315031734|gb|EFT43666.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0017] gi|315034209|gb|EFT46141.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0027] gi|315144363|gb|EFT88379.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX2141] gi|315147931|gb|EFT91947.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX4244] gi|315153056|gb|EFT97072.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0031] gi|315156828|gb|EFU00845.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0043] gi|315157615|gb|EFU01632.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0312] gi|315162957|gb|EFU06974.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0645] gi|315165155|gb|EFU09172.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX1302] gi|315168055|gb|EFU12072.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX1341] gi|315577404|gb|EFU89595.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0630] gi|323480219|gb|ADX79658.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis 62] gi|327534566|gb|AEA93400.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis OG1RF] gi|329574368|gb|EGG55940.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX1467] Length = 448 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|34581352|ref|ZP_00142832.1| exodeoxyribonuclease large subunit [Rickettsia sibirica 246] gi|28262737|gb|EAA26241.1| exodeoxyribonuclease large subunit [Rickettsia sibirica 246] Length = 457 Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats. Identities = 179/486 (36%), Positives = 259/486 (53%), Gaps = 54/486 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E+SVSE+S +K ++E+N ++ V+GEISG + I +SGHAYF+LK+N + + W+ Sbjct: 24 TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L +EG Sbjct: 83 ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKEG 142 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EIA Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 K ++ + LD L L I Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++ KI R I Y + + Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F D Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449 Query: 492 GQANAI 497 G+ + Sbjct: 450 GEIKVV 455 >gi|227544391|ref|ZP_03974440.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri CF48-3A] gi|300909748|ref|ZP_07127209.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri SD2112] gi|227185654|gb|EEI65725.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri CF48-3A] gi|300893613|gb|EFK86972.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri SD2112] Length = 445 Score = 335 bits (858), Expect = 2e-89, Method: Composition-based stats. Identities = 152/497 (30%), Positives = 242/497 (48%), Gaps = 63/497 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +VSEL+ +LK + + L V + GE+S +R H YFSLKD+++ IDA+++ Sbjct: 4 SQYLTVSELTKYLKMKFDRDPYLHTVYLTGELSNFRLRQK--HQYFSLKDDNAVIDAVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + KI+F PE+G++ V+G ++ + S +YQI I+ + P G G+L A E+ KKKL Sbjct: 62 EHQFRKIKFTPEQGMKVCVVGHVSLYEKSGRYQIYIDRMEPDGLGSLYLAFEQLKKKLSA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF+ K IP PK IAV+TS GAVIRDI + R+P+ +V+++P VQGD+ Sbjct: 122 EGLFNLPKKQ-IPMFPKRIAVVTSIDGAVIRDINTTVRRRYPIAQVVLYPTVVQGDKAAA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA I + N D +I+ RGGGS+EDLW FN+E++ RAIANS IP+IS++G Sbjct: 181 DIARQINRANDR------GDFDTLIIGRGGGSMEDLWPFNEEVVARAIANSKIPVISSVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD T+AD AD RA TPT AAE+A PVK + +L + + RL N + I + L Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPVKLNDVLMTLKDDQNRLLNTMRTKINFDRQQL 294 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L+ + ++D+L ++L + + + + R+ + +H Sbjct: 295 NKQLQSYIFQQPTRLYENYAQKVDQLTQQLGQAAQNKMQEMRMNVERLSGRLTAISPLHR 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ Q + + Q+ + Sbjct: 355 VQQQEQLVNQLQKQLVTASLASQ------------------------------------- 377 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 V+ + L S + + RGYT + ++ + L + Sbjct: 378 ----------NEKKQQVTTLIKQLDSLSPLKIMSRGYTYVT-SDEKVVNHASQLTVGQNV 426 Query: 486 LINFFDGQANAIVINKA 502 ++F DG+ A + Sbjct: 427 HLHFDDGEVQAEIKKVK 443 >gi|56461112|ref|YP_156393.1| exodeoxyribonuclease VII large subunit [Idiomarina loihiensis L2TR] gi|56180122|gb|AAV82844.1| Exonuclease VII, large subunit [Idiomarina loihiensis L2TR] Length = 436 Score = 335 bits (858), Expect = 2e-89, Method: Composition-based stats. Identities = 123/487 (25%), Positives = 226/487 (46%), Gaps = 57/487 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 YSV +L+ ++ ++E + + GEIS + SGH YF+LKD +++ +++ Sbjct: 2 VYSVRQLNTEIRQLLEQGFGQISLVGEISNF-AAPGSGHWYFTLKDERAQVRCAMFRNAN 60 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + + P+ G++ LV K+T + YQ+IIE + +G G L E+ K+KL EGLF Sbjct: 61 QRAKVRPQNGMQVLVRAKVTVYEPRGDYQLIIEQVEDAGQGLLQQRYEQLKEKLSAEGLF 120 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K +P + + V+TSPTGA I+DIL + R P + VII+P VQG+ ++ Sbjct: 121 AAERKRLLPDHIRKVGVLTSPTGAAIKDILAVMKRRDPGVEVIIYPSAVQGEAAVPQLQA 180 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + E D+++++RGGGS+EDLW FNDE R +A + +P ISA+GHE D Sbjct: 181 MLKTAFERNE------VDVLLVSRGGGSLEDLWCFNDETFARLLATAPMPTISAVGHEID 234 Query: 253 WTLADYAADLRAPTPTGAAEMAVPV--KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 +T+AD+ AD+RAPTP+ AAE+ ++ ++ + L + + Sbjct: 235 FTIADFVADVRAPTPSAAAELVTRDQQQQQQKAQALQQRLGLAQQRLLQRLQQRWQFLQT 294 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + L D L L+ + R+ + +++ R+++ +Q+ + Sbjct: 295 RLQQQHPQRQLQQQSQLADELQARANRALQNRLARQKQQVSYLHGRLQAMHPQKELQRLQ 354 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + +QQ + Q++++ L+ ++++ + Sbjct: 355 QKLQTQQQRLPQVMQRVLKDKRTQQQQLMQA----------------------------- 385 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L + NTL+RGY ++ + + ++ + I + Sbjct: 386 ------------------LNLVSPLNTLERGYAIVRTEKGDVVRSEKQVTVGESIEVRLA 427 Query: 491 DGQANAI 497 DG A Sbjct: 428 DGNITAK 434 >gi|289525368|emb|CBJ14845.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis Sweden2] gi|296434920|gb|ADH17098.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis E/150] gi|296438640|gb|ADH20793.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis E/11023] Length = 516 Score = 335 bits (858), Expect = 2e-89, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 250/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVFSRRCHQFQVILYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL +++ + I K N L Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRSALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + + Q R+ Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508 >gi|238650991|ref|YP_002916847.1| exodeoxyribonuclease VII large subunit [Rickettsia peacockii str. Rustic] gi|238625089|gb|ACR47795.1| exodeoxyribonuclease VII large subunit [Rickettsia peacockii str. Rustic] Length = 457 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 179/486 (36%), Positives = 259/486 (53%), Gaps = 54/486 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E+SVSE+S +K ++E+N ++ V+GEISG + I +SGHAYF+LK+N + + W+ Sbjct: 24 TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L +EG Sbjct: 83 ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKEG 142 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EIA Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYETILLNNTSRLIKYHEQNIVNYN 318 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 K ++ + LD L L I Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++ KI R I Y + + Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F D Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449 Query: 492 GQANAI 497 G+ + Sbjct: 450 GEIKVV 455 >gi|315149501|gb|EFT93517.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0012] Length = 448 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFFQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|307290058|ref|ZP_07569982.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0411] gi|306498900|gb|EFM68394.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0411] Length = 448 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFE-GPEQQLPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|124007173|sp|Q4UMV4|EX7L_RICFE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 450 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 179/489 (36%), Positives = 260/489 (53%), Gaps = 54/489 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + E+SVSE+S +K ++E+N ++ V+GEISG + I SSGHAYF+LK+N + + Sbjct: 8 NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 66 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+ L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L Sbjct: 67 WRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPAGLGAMLQILNERKARLE 126 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ Sbjct: 127 KEGLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGN 185 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+G Sbjct: 186 EIAEAIEGFNNLEE---INKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + Sbjct: 243 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNII 302 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + K ++ + LD L L I Sbjct: 303 NYDKIHRYLSHYMNNKQQLLDETGFNLLDALPCFIEL----------------------- 339 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ KI R + Y + + Sbjct: 340 --------------------------QETKIKSFSKERVNPAKILNYKTLELTHQTAYLS 373 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I Sbjct: 374 KSANNTLKNFEYKLELNSTLLASLDYNNVLKRGFAIVKGETGNFLSSKITAANEKIFNIK 433 Query: 489 FFDGQANAI 497 F DG+ + Sbjct: 434 FSDGEIKVV 442 >gi|67458645|ref|YP_246269.1| exodeoxyribonuclease VII large subunit [Rickettsia felis URRWXCal2] gi|67004178|gb|AAY61104.1| Exodeoxyribonuclease VII, large subunit [Rickettsia felis URRWXCal2] Length = 462 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 179/489 (36%), Positives = 260/489 (53%), Gaps = 54/489 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + E+SVSE+S +K ++E+N ++ V+GEISG + I SSGHAYF+LK+N + + Sbjct: 20 NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 78 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+ L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L Sbjct: 79 WRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPAGLGAMLQILNERKARLE 138 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ Sbjct: 139 KEGLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGN 197 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+G Sbjct: 198 EIAEAIEGFNNLEE---INKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 254 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + Sbjct: 255 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNII 314 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + K ++ + LD L L I Sbjct: 315 NYDKIHRYLSHYMNNKQQLLDETGFNLLDALPCFIEL----------------------- 351 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ KI R + Y + + Sbjct: 352 --------------------------QETKIKSFSKERVNPAKILNYKTLELTHQTAYLS 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I Sbjct: 386 KSANNTLKNFEYKLELNSTLLASLDYNNVLKRGFAIVKGETGNFLSSKITAANEKIFNIK 445 Query: 489 FFDGQANAI 497 F DG+ + Sbjct: 446 FSDGEIKVV 454 >gi|116333614|ref|YP_795141.1| exodeoxyribonuclease VII large subunit [Lactobacillus brevis ATCC 367] gi|116098961|gb|ABJ64110.1| Exodeoxyribonuclease VII large subunit [Lactobacillus brevis ATCC 367] Length = 451 Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats. Identities = 153/500 (30%), Positives = 241/500 (48%), Gaps = 62/500 (12%) Query: 15 YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK V+ L V + GEIS +R + H YFSLKD+H++I AI++K Sbjct: 7 LTVTALTQYLKRKFDVDPYLGKVYLTGEISNFRLRPHA-HQYFSLKDDHAKISAIMFKSA 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F PE G++ LV G+I+ + S YQI +E + P G G L A E+ K+KL EGL Sbjct: 66 FEKLKFTPETGMKVLVTGRISLYEPSGSYQIYVERMEPDGVGQLYQAYEQLKRKLAAEGL 125 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F+ + P+ PK IAV+TSP+GAVIRDI+ RFP+ +++++P VQGD +I Sbjct: 126 FTAPKR-PLSRFPKRIAVVTSPSGAVIRDIITTTRRRFPIAQIVLYPAVVQGDAAADDIV 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N + D +I+ RGGGSIEDLW FN+E + RAIA S +P+IS++GHET Sbjct: 185 RQIQRANAAQ------SFDTLIIGRGGGSIEDLWPFNEERVARAIAASQLPVISSVGHET 238 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--S 309 D T+AD AD+RA TPT AAE+AVPV L RL N + I ++ LN Sbjct: 239 DTTIADLVADVRAATPTAAAELAVPVLSDELLKLQQQRTRLLNAMANRINFQQERLNKLM 298 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + RLDR + L N++ ++ ++ + F + S + +Q+N Sbjct: 299 TAYVFRQPQRLYETYVQRLDRAQQALGRNMQDLVTQRQQQFQLAQQALASRSPLARVQRN 358 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + + + + + Sbjct: 359 QLVVQQTATRLATEAR-------------------------------------------- 374 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + + V L + + RGY+ + +++ + + L + ++ Sbjct: 375 ---RYVTAKQEHVGQLINGLDYLSPLKIMGRGYSYVT-QDDHVVRSVQQLQPGPAM-VHL 429 Query: 490 FDGQANAIVINKAPPKEQPT 509 DG A+A + P E+ T Sbjct: 430 SDGTASAEIKTITPASEEKT 449 >gi|315173306|gb|EFU17323.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX1346] Length = 448 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 146/503 (29%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQGD+ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGDQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|70726393|ref|YP_253307.1| exodeoxyribonuclease VII large subunit [Staphylococcus haemolyticus JCSC1435] gi|82592840|sp|Q4L6M4|EX7L_STAHJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|68447117|dbj|BAE04701.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 445 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 151/495 (30%), Positives = 241/495 (48%), Gaps = 61/495 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ ++K+ + + L + ++GE+S ++ HSSGH YF++KD S I A+++ Sbjct: 2 SEYLSVTTLTKYIKYKFDQDPHLQSILLKGELSNFK-KHSSGHLYFNVKDKDSVISAMMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG N++ F P+EG E L+ +++ + YQI + + G G L LE+ K+KL + Sbjct: 61 KGNANQLTFEPKEGDEVLLEARVSVYERRGNYQIYVNKMELDGIGNLYQKLEQLKQKLKK 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EG F+++HK PIP PK IA++T+ TGA IRDI I+ R+PL I VQG + + Sbjct: 121 EGFFNNEHKKPIPRFPKKIAILTASTGAAIRDIQSTINSRYPLAEKIQISTLVQGTQAKE 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I I ++L D II+ RGGGSIEDLW+FN+E +V+AI PIISA+G Sbjct: 181 DIIKNIKYADSL-------GVDTIIVGRGGGSIEDLWNFNEEDVVKAIFECQTPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL+D+ AD+RA TPT AA MA P + L + + L+ I + ++ + L+ Sbjct: 234 HETDFTLSDFVADVRAATPTQAAVMATPDQYELMQQIKQYQFSLSRYIKQYLEKQYKQLD 293 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L R D L R+L L I K + L I Sbjct: 294 HLASYYKFKQPSLLYDQQIQRKDDLERQLTQLLLSKIENKKYQLKVLHQNFNVKTLNQTI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +N++ ++ + + + +++ LE K K+ Sbjct: 354 LQNKRQLVNVKNRLSNLTMKNIHNNKLEFKNKV--------------------------- 386 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 +L + + NT+ RGY+ I + ++ IT ++L+ I Sbjct: 387 --------------------ELLNNLSPTNTMLRGYSII-NKDDKVITSTQDLSKDDEIT 425 Query: 487 INFFDGQANAIVINK 501 + DG +AIV Sbjct: 426 LAMKDGNVDAIVKKV 440 >gi|166154539|ref|YP_001654657.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 434/Bu] gi|166155414|ref|YP_001653669.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335801|ref|ZP_07224045.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis L2tet1] gi|226694640|sp|B0B7P6|EX7L_CHLT2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226694641|sp|B0BBW1|EX7L_CHLTB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|165930527|emb|CAP04022.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 434/Bu] gi|165931402|emb|CAP06976.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 516 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 161/514 (31%), Positives = 252/514 (49%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N R +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 181 QEISQAIQFFNQ-----NSMRVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL +++ + I K N L Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + + Q R+ Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHRTQHSRNILSQLSRRLHIA 414 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 415 IASSQQTHQECLVRLQNELSFTIQHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508 >gi|29375561|ref|NP_814715.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis V583] gi|227555089|ref|ZP_03985136.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis HH22] gi|81838968|sp|Q836W6|EX7L_ENTFA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|29343022|gb|AAO80785.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis V583] gi|227175757|gb|EEI56729.1| exodeoxyribonuclease VII large subunit [Enterococcus faecalis HH22] gi|315574276|gb|EFU86467.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0309B] gi|315581569|gb|EFU93760.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX0309A] Length = 448 Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 246/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + + + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQRADAQSD------FDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|307275461|ref|ZP_07556603.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX2134] gi|306507849|gb|EFM76977.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX2134] Length = 448 Score = 334 bits (856), Expect = 3e-89, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LKIHYADGTVQANVETITAKKEE 447 >gi|15892949|ref|NP_360663.1| exodeoxyribonuclease VII large subunit [Rickettsia conorii str. Malish 7] gi|15620143|gb|AAL03564.1| exodeoxyribonuclease large subunit [Rickettsia conorii str. Malish 7] Length = 457 Score = 334 bits (856), Expect = 3e-89, Method: Composition-based stats. Identities = 180/486 (37%), Positives = 258/486 (53%), Gaps = 54/486 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E+SVSE+S +K ++E+N ++ V+GEISG + I +SGHAYF+LK+N + + W+ Sbjct: 24 TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L KI F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK KL +EG Sbjct: 83 ILAKITFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKAKLEKEG 142 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EIA Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 K ++ + LD L L I Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++ KI R I Y + + Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F D Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKMTAANEKIFNIKFSD 449 Query: 492 GQANAI 497 G+ + Sbjct: 450 GEIKVV 455 >gi|22095672|sp|Q92GU6|EX7L_RICCN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 444 Score = 334 bits (856), Expect = 3e-89, Method: Composition-based stats. Identities = 180/486 (37%), Positives = 258/486 (53%), Gaps = 54/486 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E+SVSE+S +K ++E+N ++ V+GEISG + I +SGHAYF+LK+N + + W+ Sbjct: 11 TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 69 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L KI F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK KL +EG Sbjct: 70 ILAKITFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKAKLEKEG 129 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EIA Sbjct: 130 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 188 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 189 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 245 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 246 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 305 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 K ++ + LD L L I Sbjct: 306 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 339 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++ KI R I Y + + Sbjct: 340 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 376 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F D Sbjct: 377 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKMTAANEKIFNIKFSD 436 Query: 492 GQANAI 497 G+ + Sbjct: 437 GEIKVV 442 >gi|297748459|gb|ADI51005.1| Exodeoxyribonuclease VII large subunit [Chlamydia trachomatis D-EC] gi|297749339|gb|ADI52017.1| Exodeoxyribonuclease VII large subunit [Chlamydia trachomatis D-LC] Length = 542 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 249/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 28 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 86 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 87 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 146 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 147 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 206 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 207 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 261 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL + + + I K N L Sbjct: 262 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVLSHARQFIAAKKNLL 321 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 322 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 380 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + Q R+ Sbjct: 381 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 440 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 441 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 500 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 501 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 534 >gi|257081232|ref|ZP_05575593.1| exonuclease VII [Enterococcus faecalis E1Sol] gi|256989262|gb|EEU76564.1| exonuclease VII [Enterococcus faecalis E1Sol] Length = 448 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 144/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YF+LKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFNLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|28378301|ref|NP_785193.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum WCFS1] gi|254556508|ref|YP_003062925.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum JDM1] gi|31563098|sp|Q88WM7|EX7L_LACPL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|28271136|emb|CAD64041.1| exodeoxyribonuclease VII, large subunit [Lactobacillus plantarum WCFS1] gi|254045435|gb|ACT62228.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum JDM1] Length = 447 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 157/498 (31%), Positives = 243/498 (48%), Gaps = 61/498 (12%) Query: 9 SLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S +V+ L+ +LK E L V + GE+S YR ++ H YFSLKD+H++I A Sbjct: 2 SESQQYLTVTALTQYLKRKFEVDPYLGKVYLTGEVSNYRPRPNT-HQYFSLKDDHAKISA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 I++K K++F PEEG++ LV+G+I + S YQI +E + P G G L A E+ KKK Sbjct: 61 IMFKSAFAKVKFQPEEGMKVLVVGRIGLYEPSGSYQIYVERMEPDGVGALYQAYEQLKKK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L EGLFS K P+P PK IAV+TS +GAVIRDI+ RFP+ ++++FP +VQGD Sbjct: 121 LAAEGLFSAPKK-PLPRFPKRIAVVTSRSGAVIRDIITTTRRRFPIAQIVLFPSQVQGDA 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 EI+ I + N D +I+ RGGGSIEDLW FN+E++ RAIA S +P+IS Sbjct: 180 AAAEISRQIERANA------QGDFDTLIIGRGGGSIEDLWPFNEEVVARAIAQSQLPVIS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 ++GHETD T+AD AD+RA TPT AAE+AVPV + L + R+ N ++ Sbjct: 234 SVGHETDTTIADLVADVRAATPTAAAELAVPVYNDVLLQLKQDQTRVFNAFQNFVQRDRQ 293 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 LN L ++ +LD L L+ + +H+ + +++ I Sbjct: 294 RLNKLQTSYVFTQPNRLYEGYLQKLDFLNERLKQAGQNNFNLASQHYQRVFQQLRQQTPI 353 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 H +++ + +L QQ + + + +R + + + Sbjct: 354 HQVRQAQTQLLNLQQRLNRGTQLVVRQKRQQLTQTVQS---------------------- 391 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L + + RGY + + + + L + Sbjct: 392 -------------------------LDLLSPLKIMTRGYAFVT-ADEQVVHGVKQLQPEQ 425 Query: 484 RILINFFDGQANAIVINK 501 + I+ DG+A A + Sbjct: 426 TVAIHMADGEAQAQITKI 443 >gi|296436772|gb|ADH18942.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis G/11222] Length = 516 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 250/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL +++ + I K N L Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVSSHARQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + Q R+ Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 414 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 415 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508 >gi|257086338|ref|ZP_05580699.1| exonuclease VII [Enterococcus faecalis D6] gi|256994368|gb|EEU81670.1| exonuclease VII [Enterococcus faecalis D6] gi|315026956|gb|EFT38888.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis TX2137] Length = 448 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 144/503 (28%), Positives = 243/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVARAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R I +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGITAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGAVQANVETITAKKEE 447 >gi|255311132|ref|ZP_05353702.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 6276] gi|255317433|ref|ZP_05358679.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis 6276s] Length = 516 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 249/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL + + + I K N L Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVLSHARQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTLAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + Q R+ Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 414 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 415 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508 >gi|299137944|ref|ZP_07031124.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp. MP5ACTX8] gi|298599874|gb|EFI56032.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp. MP5ACTX8] Length = 531 Score = 334 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 123/503 (24%), Positives = 224/503 (44%), Gaps = 58/503 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + ++V +L ++ +VE + + V GEIS +R +SGH YF+LKD ++ Sbjct: 84 PVASTPQAEARVWTVGDLVREVRGLVERSYGQITVDGEISNWR-PAASGHCYFTLKDGNA 142 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ ++++ + + F P++G + G+++ + + Q+I E++ G G LL A+++ Sbjct: 143 QLSVVMFRRQASLLRFRPKDGDAVRLHGQVSVYESRGQMQLIAETMEEVGQGALLAAVQR 202 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 K++L EG+F + +P PK I V+TS GA +RDI++ R + ++I+P V Sbjct: 203 LKERLRREGVFDRERP--LPAFPKCIGVVTSLQGAALRDIVKVCRRRHAAVNLLIYPAAV 260 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG C +E+ + + + D++I+ARGGGS EDL F+DE + RAIA +I Sbjct: 261 QGPRCAEEVIAGVEWFSAHPQLA-----DVLIVARGGGSWEDLHGFDDEGVARAIAACAI 315 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+I+ IGH TD T+ D AAD+ APTP+ AAE+ + ++ + L +R+ I Sbjct: 316 PVIAGIGHATDTTITDAAADVCAPTPSAAAELVTAAQYRIEERVERLRSRVFRAGNYEIL 375 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L L RLD L E + + + +R++ Sbjct: 376 RARQRFSRLSAESALRRLRDALGRREQRLDELSFRAESAAARTLRSREERLARLTSRLQR 435 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + ++++ + Q ++ + + M R Q Sbjct: 436 QDVALRLAEDKRRLERLQVRLQSVG---------------STATMRRNQ----------- 469 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 V L++ + L+RGY + + + N+ Sbjct: 470 ---------------------QVERCVSRLEALSPLRVLERGYALVYGPDGKLLRSTANV 508 Query: 480 ATKTRILINFFDGQANAIVINKA 502 I+ DG A V +K Sbjct: 509 VAYDTIVARLADGSVRARVTSKE 531 >gi|148544407|ref|YP_001271777.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri DSM 20016] gi|184153770|ref|YP_001842111.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri JCM 1112] gi|227363168|ref|ZP_03847302.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri MM2-3] gi|325682727|ref|ZP_08162243.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri MM4-1A] gi|226697592|sp|A5VKR6|EX7L_LACRD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697593|sp|B2G849|EX7L_LACRJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|148531441|gb|ABQ83440.1| Exodeoxyribonuclease VII large subunit [Lactobacillus reuteri DSM 20016] gi|183225114|dbj|BAG25631.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri JCM 1112] gi|227071774|gb|EEI10063.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri MM2-3] gi|324977077|gb|EGC14028.1| exodeoxyribonuclease VII large subunit [Lactobacillus reuteri MM4-1A] Length = 445 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 151/497 (30%), Positives = 241/497 (48%), Gaps = 63/497 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +VSEL+ +LK + + L V + GE+S +R H YFSLKD+++ IDA+++ Sbjct: 4 SQYLTVSELTKYLKMKFDRDPYLHTVYLTGELSNFRLRQK--HQYFSLKDDNAVIDAVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + KI+F PE+G++ V+G ++ + S +YQI I+ + P G G+L A E+ KKKL Sbjct: 62 EHQFRKIKFTPEQGMKVCVVGHVSLYEKSGRYQIYIDRMEPDGLGSLYLAFEQLKKKLSA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF+ K IP PK IAV+TS GAVIRDI + R+P+ +V+++P VQGD+ Sbjct: 122 EGLFNLPKKQ-IPMFPKRIAVVTSIDGAVIRDINTTVRRRYPIAQVVLYPTVVQGDKAAA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA I + N D +I+ RGGGS+EDLW FN+E++ RAIANS IP+IS++G Sbjct: 181 DIARQINRANDR------GDFDTLIIGRGGGSMEDLWPFNEEVVARAIANSKIPVISSVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD T+AD AD RA TPT AAE+A PVK +L + + RL N + I + L Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPVKLNDALMTLKDDQNRLLNTMRTKINFDRQQL 294 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L+ + ++D+L ++L + + + + R+ + +H Sbjct: 295 NKQLQSYIFQQPTRLYENYAQKVDQLTQQLGQAAQNKMQELQMNVERLSGRLTAASPLHR 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ Q + + ++ + Sbjct: 355 VQQQEQLVDQLKKQLVTASLASQ------------------------------------- 377 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 V+ + L S + + RGYT + ++ + L + Sbjct: 378 ----------NEKKQQVTTLIKQLDSLSPLKIMSRGYTYVT-SDEKVVNHASQLTVGQNV 426 Query: 486 LINFFDGQANAIVINKA 502 ++F DG+ A + Sbjct: 427 HLHFDDGEVQAEIKKVK 443 >gi|15605052|ref|NP_219836.1| exodeoxyribonuclease VII large subunit [Chlamydia trachomatis D/UW-3/CX] gi|14194712|sp|O84333|EX7L_CHLTR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|3328747|gb|AAC67922.1| Exodoxyribonuclease VII [Chlamydia trachomatis D/UW-3/CX] Length = 516 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 160/514 (31%), Positives = 249/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPIEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRKPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K P+P ++I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKKPLPSGARVIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N +I+ARGGGSIEDLW FN+E +V++I SSIPIISA+ Sbjct: 181 QEISQAIQFFNQ-----NSMGVHALIIARGGGSIEDLWAFNEEELVKSIVASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+A+D+RAPTP+ AAE+ + + L NL + + + I K N L Sbjct: 236 GHETDFTLCDFASDVRAPTPSAAAEIVCKSSDQYRQELQNLRRYVLSHARQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D ++ LD LE +E + + F +KSD LI Sbjct: 296 THWQRHLASVD-FYHTAQQTLDYTRAALERGIETKLEYYKQRFAQYRRWLKSDVLIRIEK 354 Query: 365 --------NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 + + I K+ + Q+ L+ L + + Q R+ Sbjct: 355 HLADLNQSLMLSIKNKIYTKKTSLNQLYTSCLKNELLNLQHHTQHSRNILSQLSRRLHIA 414 Query: 415 ------YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +L + F + H + S KN LKRG+ + D Sbjct: 415 IASSQQTHQECLVRLQNELSFTIHHLLTKAKERCQAIQEQASSLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHFVIISAESLKQSDLVRVCLQDGEAVVSVKEV 508 >gi|332638328|ref|ZP_08417191.1| exodeoxyribonuclease VII large subunit [Weissella cibaria KACC 11862] Length = 421 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 138/494 (27%), Positives = 214/494 (43%), Gaps = 80/494 (16%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS L+ +LK + L V V GEIS YR GH YFSLKD+ + ++A ++K Sbjct: 5 LTVSALTSYLKRKFTADPYLKEVYVTGEISNYRQRP--GHQYFSLKDDGAVLNATMFKFA 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F E G++ +G + + + Y +II+ L P G G L A E+ K KL EGL Sbjct: 63 FQKLQFKLEPGMKVNAVGHMDLYAPNGSYSLIIDKLEPDGVGALYQAYEQLKAKLSAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + PIP PK IAVITSP+GAVIRDI+ + R+P+ ++++P VQGD + Sbjct: 123 FDQLRR-PIPRFPKKIAVITSPSGAVIRDIMTTVRRRYPIAEIVLYPAVVQGDGAVPSLT 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + + D++I+ RGGGSIEDLW FN+E + R + +PIIS++GHET Sbjct: 182 KQMTAV------AEAADYDVLIMGRGGGSIEDLWAFNEEAVARQMLTMPMPIISSVGHET 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T+AD+ AD RA TPT AAE+A PV Sbjct: 236 DTTIADFVADQRAATPTAAAELATPVPLADLWLG-------------------------- 269 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 + + RL ++ + + + N + Q Sbjct: 270 ---------IQQMQQRLVNQ-------MQRQVVANQERLSRLQNSYVLTQPARLYEGYLQ 313 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + QQ ++Q V + L R+ + Sbjct: 314 RLDIAQQRLQQAVTTT-------------------------VTQRQHQFDLLAPRLVNAM 348 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + +++ V LQ + L RGY+ ++ + + +T ++A + I Sbjct: 349 TRQVERSQERVGRAVAGLQLVSPLAILARGYSVVEH-DTHILTTVDDVAVGDTVHIRLAT 407 Query: 492 GQANAIVINKAPPK 505 G+ +A V K K Sbjct: 408 GELDATVTAKESEK 421 >gi|165933606|ref|YP_001650395.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str. Iowa] gi|165908693|gb|ABY72989.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str. Iowa] Length = 457 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 179/486 (36%), Positives = 258/486 (53%), Gaps = 54/486 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E+SVSE+S +K ++E+N ++ V+GEISG + I SSGHAYF+LK+N + + W+ Sbjct: 24 TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTCWRP 82 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L + G Sbjct: 83 ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKAG 142 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EIA Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 K ++ + LD L L I Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++ KI R I Y + + Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F D Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449 Query: 492 GQANAI 497 G+ + Sbjct: 450 GEIKVV 455 >gi|256960161|ref|ZP_05564332.1| exonuclease VII [Enterococcus faecalis Merz96] gi|293382529|ref|ZP_06628463.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis R712] gi|293387871|ref|ZP_06632410.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis S613] gi|312906868|ref|ZP_07765865.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis DAPTO 512] gi|312978877|ref|ZP_07790603.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis DAPTO 516] gi|256950657|gb|EEU67289.1| exonuclease VII [Enterococcus faecalis Merz96] gi|291080077|gb|EFE17441.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis R712] gi|291082718|gb|EFE19681.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis S613] gi|310627122|gb|EFQ10405.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis DAPTO 512] gi|311288314|gb|EFQ66870.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecalis DAPTO 516] Length = 448 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 145/503 (28%), Positives = 244/503 (48%), Gaps = 61/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MTQQYLTVTALTKYLKRKFDADPYLGRVYLTGEISNFRFRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F P+EG++ +V+G+I+ + S YQI IE + P G G L AL + ++KL Sbjct: 60 MFKSAFQKLKFQPKEGMKVMVVGRISLYENSGSYQIYIEHMEPDGVGALYQALAELREKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF + +P PK IAV+TSP+GAVIRDI+ + R+P+ ++++FP VQG++ Sbjct: 120 GKEGLFEGPKQQ-LPRYPKRIAVVTSPSGAVIRDIITTVKRRYPIAQLVLFPTLVQGEQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 179 ADDIVRNIQR------ADAQGDFDTMIIGRGGGSIEDLWPFNEEKVSRAIHAATTPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +RL + L++ + Sbjct: 233 VGHETDVTIADMVADVRAATPTAAAELAVPVLNEELLRISERRSRLEQSFLYLLQQRTER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ +LDR+ + L + I +K R II +++ Sbjct: 293 FQRLQNSYVFKQPERLYEGQTIKLDRMTQRLFQAMTTIHHQKQRQAQGIIAQLQQQTPKG 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++++Q + Q++++ + Sbjct: 353 QLRESQQQLAFLQRNLQTQMT--------------------------------------- 373 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + L + + RGY+ + + L + Sbjct: 374 --------QLFLNKQKQFTSAVQQLDLLSPLKIMGRGYSYTTKED-RVVKTVTELQPADQ 424 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I++ DG A V KE+ Sbjct: 425 LTIHYADGTVQANVETITAKKEE 447 >gi|239627504|ref|ZP_04670535.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517650|gb|EEQ57516.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 428 Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats. Identities = 130/493 (26%), Positives = 223/493 (45%), Gaps = 79/493 (16%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+VS+++ +++++ + + + ++GE+S + H+SGH YF+LKD S+I A+++ G Sbjct: 4 VYTVSQVTAYIRNMFTQDFALNRISIKGEVSNCK-YHTSGHIYFTLKDGGSQIAAVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F EEG E V G + + +YQ+ + + G G L EK + +L E G Sbjct: 63 QRKGLAFELEEGQEVTVTGNVDVYERDGRYQLYAKEITREGRGDLFARFEKLRGELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F +K PIP + + ++T+ TGA IRDI+ + R P ++++++P VQG++ I Sbjct: 123 MFDGCYKQPIPKYARKVGIVTASTGAAIRDIMNISARRNPYVQLVLYPALVQGEKAKYSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L+ + D+II+ RGGGSIEDLW FN+EM+ RAI N S P+ISA+GHE Sbjct: 183 VKGIETLDAM-------GLDVIIVGRGGGSIEDLWAFNEEMVARAIFNCSTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV Sbjct: 236 TDVTIADYVADLRAPTPSAAAELAVFDYS------------------------------- 264 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 ++ + L ++E + R + R+K + R Sbjct: 265 ------------QFEEQVRLYSQVLNRSMERKLERLHFRLEQGKMRLKLRSPERLLVDRR 312 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + + +E+ + K+++ ++ R++ Sbjct: 313 QRLADIESFLER-------------------------RLKDKLEQDRRSLEDRRQRLDMY 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +S +K+ +++ L + + L GY + D + RI I+ Sbjct: 348 MSDSLKAGQHRLALAAGRLDALSPLKKLSGGYGFVTDPRGKAVRSIEQTGIGDRIGISVR 407 Query: 491 DGQANAIVINKAP 503 DG+ A V Sbjct: 408 DGRIEAQVTKTVA 420 >gi|304413110|ref|ZP_07394583.1| exodeoxyribonuclease VII large subunit [Candidatus Regiella insecticola LSR1] gi|304283953|gb|EFL92346.1| exodeoxyribonuclease VII large subunit [Candidatus Regiella insecticola LSR1] Length = 451 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 133/500 (26%), Positives = 224/500 (44%), Gaps = 54/500 (10%) Query: 8 NSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S+ P ++VS L+ H++ ++E + + + EIS + SSGH YF+LKD +++ Sbjct: 2 PSISVPSIFTVSLLNQHVRQLLEMEMGQIRLSAEISNF-SQPSSGHWYFTLKDERAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++++ + + F P G + L+ IT + YQ+I E++ P+G G L E+ +++ Sbjct: 61 VMFRNSNRFVTFKPRNGQQVLIRASITLYEARGDYQLIAENMQPAGDGLLQQQFEQLRQQ 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF HK P+P K I VITS GAV+ D+LQ + R P L V+I+P VQG + Sbjct: 121 LTAEGLFKQDHKKPLPHSAKQIGVITSIHGAVLHDVLQVLQRRDPSLPVVIYPTSVQGVD 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI N E D++I+ RGGG++EDLW FNDE +VRAI NS +PI+S Sbjct: 181 APWQIMKAIEIANQRAE------CDVLIVCRGGGALEDLWSFNDERVVRAIFNSRLPIVS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD TL D+ ADLRAPTP+ AAE+ + L + + R+ + + Sbjct: 235 AVGHETDVTLVDFVADLRAPTPSAAAELLSRDQLELMRQIAVQQQRMAMALDYYLAQCQR 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + + + Sbjct: 295 QFSQFKHRLQRQHPQLQLANQQTE------------------------------------ 318 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ Q +EQ + + ++ +++ + + H I++ Sbjct: 319 -------LVRLQNRLEQAISTQM--AEQLQQLHFLQQRLIKLRLLEYFYGYHQRIQQQAY 369 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ L + S+ L++ + L RGY + + + +I Sbjct: 370 GLKQALERQCNQYRQRFSVVCSRLEAVSPLAILARGYNVTHTSAGTVLNSIKQGQRGEKI 429 Query: 486 LINFFDGQANAIVINKAPPK 505 + DG + + K Sbjct: 430 ITRLQDGSIESEITQINAVK 449 >gi|300767237|ref|ZP_07077149.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308180451|ref|YP_003924579.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum subsp. plantarum ST-III] gi|300495056|gb|EFK30212.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045942|gb|ADN98485.1| exodeoxyribonuclease VII large subunit [Lactobacillus plantarum subsp. plantarum ST-III] Length = 447 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 156/498 (31%), Positives = 243/498 (48%), Gaps = 61/498 (12%) Query: 9 SLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S +V+ L+ +LK E L V + GE+S YR ++ H YFSLKD+H++I A Sbjct: 2 SESQQYLTVTALTQYLKRKFEVDPYLGKVYLTGEVSNYRPRPNT-HQYFSLKDDHAKISA 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 I++K K++F PEEG++ LV+G+I + S YQI +E + P G G L A E+ KKK Sbjct: 61 IMFKSAFAKVKFQPEEGMKVLVVGRIGLYEPSGSYQIYVERMEPDGVGALYQAYEQLKKK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L EGLFS K P+P P+ IAV+TS +GAVIRDI+ RFP+ ++++FP +VQGD Sbjct: 121 LAAEGLFSAPKK-PLPRFPRRIAVVTSRSGAVIRDIITTTRRRFPIAQIVLFPSQVQGDA 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 EI+ I + N D +I+ RGGGSIEDLW FN+E++ RAIA S +P+IS Sbjct: 180 AAAEISRQIERANA------QGDFDTLIIGRGGGSIEDLWPFNEEVVARAIAQSQLPVIS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 ++GHETD T+AD AD+RA TPT AAE+AVPV + L + R+ N ++ Sbjct: 234 SVGHETDTTIADLVADVRAATPTAAAELAVPVYNDVLLQLKQDQTRVFNAFQNFVQRDRQ 293 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 LN L ++ +LD L L+ + +H+ + +++ I Sbjct: 294 RLNKLQTSYVFTQPNRLYEGYLQKLDFLNERLKQAGQNNFNLASQHYQRVFQQLRQQTPI 353 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 H +++ + +L QQ + + + +R + + + Sbjct: 354 HQVRQAQTQLLNLQQRLNRGTQLVVRQKRQQLTQTVQS---------------------- 391 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L + + RGY + + + + L + Sbjct: 392 -------------------------LDLLSPLKIMTRGYAFVT-ADEQVVHGVKQLQPEQ 425 Query: 484 RILINFFDGQANAIVINK 501 + I+ DG+A A + Sbjct: 426 TVAIHMADGEAQAQITKI 443 >gi|289665663|ref|ZP_06487244.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289671326|ref|ZP_06492401.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 445 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 126/492 (25%), Positives = 223/492 (45%), Gaps = 60/492 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S SSGH YF+LKD ++I ++K Sbjct: 5 NEQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPSSGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ + G++T + YQ++++ + +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVVARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GL + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLLDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARIAQLQQHALGSAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R + R+L + ++ R +++S Sbjct: 298 LALRLRAHSPQARLQLLHRRQEEAGRQLRARMTQVLERLQARVQRGQAQLQSHNPQR--- 354 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 H+ QQ + + Sbjct: 355 ----HLAGLQQRLRALHP------------------------------------------ 368 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRIL 486 + + +++ + TR L++ + T+ RGY + + + + + R+ Sbjct: 369 QAAMQRRLQHDQVQLRSITRSLEAVSPLATVARGYAIMTRPADGSVVRSAAEVVAGERLR 428 Query: 487 INFFDGQANAIV 498 DG V Sbjct: 429 AQLADGSIEVRV 440 >gi|186475307|ref|YP_001856777.1| exodeoxyribonuclease VII large subunit [Burkholderia phymatum STM815] gi|184191766|gb|ACC69731.1| exodeoxyribonuclease VII, large subunit [Burkholderia phymatum STM815] Length = 459 Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats. Identities = 134/490 (27%), Positives = 234/490 (47%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + +++E + V V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 20 PVSVLNRAIGNMLERSFPLVWVAGEVSNFT-RAASGHWYFSIKDAQAQMRCVMFRGRAQY 78 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG + V +T + + Q+ +E++ +G G L A + K +L EGLF Sbjct: 79 AEFTPREGDKIEVRALVTMYEPRGELQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFDP 138 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 Q K +P P+ I ++TS A +RD+L ++ R P + VI++P VQG ++A + Sbjct: 139 QRKRALPAHPRSIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGVSAKLAAMV 198 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N E D++I+ RGGGSIEDLW FN+E++ RAIA S +P++S +GHETD+T Sbjct: 199 EAANRRHE------VDVLIVCRGGGSIEDLWAFNEEVLARAIAASDVPVVSGVGHETDFT 252 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + A L R+++ + L+ L + L Sbjct: 253 IADFAADVRAPTPTGAAELVSPQRVLLLRDLDHRHATLARGFGRMMERRAQQLDWLARRL 312 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L+ R L +L L + F+ + R + ++ +R H+ Sbjct: 313 VSPAERLARQRTHLQQLSVRLASAGVRPVRDARARFSLVQMRWQRWRP--DLTSHRSHVT 370 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + +E+ + + ++ L R+ Sbjct: 371 GLAERLERALLRQHERQVA-------------------------RVETLAARL------- 398 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 + + + TL+RGY ++ D + +L R+ ++ +G Sbjct: 399 ---------------EVLSPQRTLERGYAALLDAQSGRAVRAPSSLKPGRRMTVHLAEGS 443 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 444 ADIALSDVQP 453 >gi|269468101|gb|EEZ79811.1| exonuclease VII, large subunit [uncultured SUP05 cluster bacterium] Length = 430 Score = 333 bits (853), Expect = 6e-89, Method: Composition-based stats. Identities = 142/458 (31%), Positives = 220/458 (48%), Gaps = 32/458 (6%) Query: 46 GIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105 +SGH YFSLKD+ +I +++ I+F PE G+E LV T + +Q+II Sbjct: 2 SRPASGHWYFSLKDSRGQIRCALFRLNQRNIKFNPENGMEILVRAAPTLYEARGDFQLII 61 Query: 106 ESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 + + P G G L A E+ K KL +EGLF HK +P PK I VI+S GAVIRDI++ Sbjct: 62 QHVEPVGVGNLNLAFEQLKNKLKKEGLFDTIHKKSLPKEPKTIGVISSSNGAVIRDIVKV 121 Query: 166 ISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 + R+P V++F VQG+ + +A A+ R D++I+ARGGGS+EDL Sbjct: 122 LHRRYPFAEVLLFDSMVQGEGSAERLATAVQ------MADESNRCDVLIIARGGGSLEDL 175 Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284 W FN+E++ RAI P+ISA+GHETD T+AD+ +D+RAPTP+ AA MA P + L S+ Sbjct: 176 WAFNEEVLARAIFMVKTPLISAVGHETDTTIADFVSDVRAPTPSAAAMMATPDRLELLSN 235 Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 L +L + + + +N L +P + L +LD L H + I+ Sbjct: 236 TDKLYLQLRQFSKQKLTLYKHQINQLKARIPTPSKQLYLFSQQLDYFTFRLSHQTKTIVG 295 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 + ++K I NIQ ++ +Q + Q Sbjct: 296 LNRGKLTTLFEQLKQHSPIANIQHKKEINALSKQQLTQ---------------------- 333 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 Q + + ++ + L R+E ++ ++S +S L + NTL RGY+ Sbjct: 334 ---QIYHLVGQNNSALHALSERLEQSINALVESQKNKLSSCIIGLNHLSPLNTLSRGYSI 390 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 NN + K + + I DG+ + V Sbjct: 391 TSTDNNQVLLSKNTVKIGSSITTQLADGKIYSKVSKIE 428 >gi|15604518|ref|NP_221036.1| exodeoxyribonuclease VII large subunit [Rickettsia prowazekii str. Madrid E] gi|14194742|sp|Q9ZCP8|EX7L_RICPR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|3861212|emb|CAA15112.1| EXODEOXYRIBONUCLEASE LARGE SUBUNIT (xseA) [Rickettsia prowazekii] gi|292572306|gb|ADE30221.1| Exodeoxyribonuclease VII,large subunit [Rickettsia prowazekii Rp22] Length = 453 Score = 333 bits (853), Expect = 6e-89, Method: Composition-based stats. Identities = 178/489 (36%), Positives = 264/489 (53%), Gaps = 54/489 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + E+SVSE+S +K ++E+N ++ V+GEISG + SSGHAYF+LK+N + + Sbjct: 8 NQASKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-RASSGHAYFNLKENTAILACTC 66 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+ L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L Sbjct: 67 WRPILAKIKFPLNDGMEVVIGGKLSSYSGNSRYQLSVDNLQPAGLGAMLQILNERKTRLE 126 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF+ + PIPF+P I VITS TGAVI+DI+ RI RFP R+II+ V VQG+ Sbjct: 127 KEGLFNKKR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWQVSVQGENSGH 185 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+A AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+G Sbjct: 186 EMAEAIEGFNNLEE---IHKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+TL D AAD RAPTPT AAE AVPV+ L +++ + E L N RLIKY ++ Sbjct: 243 HEADYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTIQSYEKILFNNTNRLIKYHEQSIV 302 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + K ++ + LD + L L I Sbjct: 303 NYDKIHSYFSYYINNRQQLLDEIGFNLLDVLIRFI------------------------- 337 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 K+ KI R I Y + + Sbjct: 338 ------------------------ALKETKIKSFSKERINYAKIINYKILELTHQTAYLF 373 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +++ +K+ + + + +L S Y N LKRG+ ++ NF++ K + + I Sbjct: 374 KSVNNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGDAGNFLSSKSAATNEQSLNIK 433 Query: 489 FFDGQANAI 497 FFDG+ N + Sbjct: 434 FFDGEINVV 442 >gi|322436639|ref|YP_004218851.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp. MP5ACTX9] gi|321164366|gb|ADW70071.1| exodeoxyribonuclease VII, large subunit [Acidobacterium sp. MP5ACTX9] Length = 528 Score = 333 bits (853), Expect = 6e-89, Method: Composition-based stats. Identities = 121/497 (24%), Positives = 215/497 (43%), Gaps = 57/497 (11%) Query: 15 YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V +L ++ VE + + V GEIS R +SGH Y +LKD +++ ++++ Sbjct: 83 YTVRQLLNEIRQSVERSYEGTLTVEGEISNCR-PAASGHVYLTLKDGDAQLSVVMFRRQA 141 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + + F P++G+ V G+I+ + + Q+I E++ P G G L A E+ KK+L EGLF Sbjct: 142 SLLGFKPKDGLSVEVRGRISVYETRGQLQLIAETMRPRGEGALQLAFEQLKKRLAAEGLF 201 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P P + ++TS GA + DI+ + R L ++++P +QG +C + Sbjct: 202 DAARKKPLPPFPHCVGIVTSANGAALTDIINVVRRRHARLNLLVYPATMQGPQCAPSVMA 261 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + N + R D+I++ARGGGS EDL FNDE + R IA S +P++SAIGHE D Sbjct: 262 GVRWFNKHPD-----RVDLILIARGGGSFEDLAGFNDEALARVIAESELPVVSAIGHEID 316 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL- 311 T+AD+ ADLRAPTP+ AAE+ + + + LEAR+ + + L L Sbjct: 317 TTIADFVADLRAPTPSAAAELITVAQHRIGERISALEARVQRAGRYHLMHARQRLFRLSA 376 Query: 312 -KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + L ++S ++D L + + + + R++ + + Sbjct: 377 EQVLARLRDSISLRHQKVDELQFRMVAAFARVERLRSGRVIALEARLRRQDPTVRVAMAK 436 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + +++ K + + R+E Sbjct: 437 RRLEIAVARMDRAGKDMVARRGV--------------------------------RLERA 464 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + L++ + L RGY + + + + I Sbjct: 465 ---------------SARLEALSPLAVLNRGYAIVYGADGGILRDAGEAGVEQVIRARLA 509 Query: 491 DGQANAIVINKAPPKEQ 507 G A + ++ Sbjct: 510 RGSVRARITEIETTEKA 526 >gi|148979630|ref|ZP_01815635.1| exodeoxyribonuclease VII large subunit [Vibrionales bacterium SWAT-3] gi|145961715|gb|EDK27012.1| exodeoxyribonuclease VII large subunit [Vibrionales bacterium SWAT-3] Length = 414 Score = 333 bits (853), Expect = 6e-89, Method: Composition-based stats. Identities = 129/468 (27%), Positives = 218/468 (46%), Gaps = 57/468 (12%) Query: 41 ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK 100 IS + SGH Y +LKD+ +++ +++G ++ F P+ G + LV +++ + Sbjct: 1 ISNFSA-PVSGHWYLTLKDSRAQVKCAMFRGNNRRVTFRPQNGNQVLVKARLSLYEPRGD 59 Query: 101 YQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIR 160 YQ+IIES+ P G G L EK K L EGLF+ K +P PK + V+TS TGA + Sbjct: 60 YQLIIESMQPEGDGKLQQEFEKLKMNLAAEGLFAQSSKQALPEHPKRVGVVTSKTGAALF 119 Query: 161 DILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 DIL + R P L V+++P VQG+E +IA AI + N E D++I+ RGGG Sbjct: 120 DILDVLKRRDPSLPVVVYPTMVQGEEAAIQIAQAIGRANERNE------CDVLIVGRGGG 173 Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 S+EDLW FN+E++ R IA S IPIISA+GHE D T+AD+ AD+RAPTP+ AAE+ Sbjct: 174 SLEDLWCFNNEIVARTIAASQIPIISAVGHEVDVTIADFVADMRAPTPSAAAELVSRDNS 233 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEH 337 H + + + ARL + I ++ + + +L L + L +LD L L Sbjct: 234 HKEQAFASKRARLVSAIRHVLIKQAQSTQALKHRLERQHPSYQLQKQSQQLDDLDMRLRR 293 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 + + + + ++++ + + + + + H+ +Q Sbjct: 294 GMAQYLKQHAQRVERKQHQLQLNSPVKRLGEQKLHLQRSEQ------------------- 334 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 ++ + + + +++ L++ + T Sbjct: 335 ----------------------------KLLDAMDKTLLTTRHQLAMAAEKLETVSPLAT 366 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 LKRGY+ T++ ++ ++ I DG + V K Sbjct: 367 LKRGYSITHSTSSKTVSSINDVEVGEVITTQVEDGVIESQVTQKTAKA 414 >gi|194466517|ref|ZP_03072504.1| exodeoxyribonuclease VII, large subunit [Lactobacillus reuteri 100-23] gi|194453553|gb|EDX42450.1| exodeoxyribonuclease VII, large subunit [Lactobacillus reuteri 100-23] Length = 445 Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats. Identities = 142/497 (28%), Positives = 230/497 (46%), Gaps = 63/497 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +VSEL+ +LK + + L V + GE+S +R H YFSLKD+++ IDA+++ Sbjct: 4 SQYLTVSELTKYLKMKFDRDPYLHTVYLTGELSNFRLRQK--HQYFSLKDDNAVIDAVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + KI+F PE+G++ V+G ++ + + +YQI I+ + P G G+L A E+ KKKL Sbjct: 62 EHQFRKIKFTPEQGMKVCVVGHVSLYEKNGRYQIYIDRMEPDGLGSLYLAFEQLKKKLSA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF+ K IP PK IAV+TS GAVIRDI + R+P+ +V+++P VQGD+ Sbjct: 122 EGLFNLPKKQ-IPMFPKRIAVVTSIDGAVIRDINTTVRRRYPIAQVVLYPTVVQGDKAAA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA I + N D +I+ RGGGS+EDLW FN+E++ RAIANS I +IS++G Sbjct: 181 DIARQINRANDR------GDFDTLIIGRGGGSMEDLWPFNEEVVARAIANSKISVISSVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL---INLEARLNNIIIRLIKYKIN 305 HETD T+AD AD RA TPT AAE+A PVK + + Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPVKLNDVLLTLKDDQNRLLNTMRTKINFDRQQL 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ ++D+L ++L + + + + R+ + +H Sbjct: 295 NKQLQSYIFQQPERLYENYAQKVDQLTQQLGQAAQNKMQDMRINVERLSGRLTAISPLHQ 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ Q + + Q+ + + Sbjct: 355 VQQQEQLVNQLQKQLVTASLANQ------------------------------------- 377 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 V+ + L S + + RGYT + ++ + L + Sbjct: 378 ----------NEKKQQVTTLIKQLDSLSPLKIMSRGYTYVT-SDEKVVNHASQLTVGQNV 426 Query: 486 LINFFDGQANAIVINKA 502 ++F DG+ A + Sbjct: 427 HLHFDDGEVQAEIKKVK 443 >gi|23099334|ref|NP_692800.1| exodeoxyribonuclease VII large subunit [Oceanobacillus iheyensis HTE831] gi|31563140|sp|Q8EQ44|EX7L_OCEIH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|22777563|dbj|BAC13835.1| exodeoxyribonuclease VII large subunit [Oceanobacillus iheyensis HTE831] Length = 455 Score = 332 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 148/502 (29%), Positives = 242/502 (48%), Gaps = 60/502 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ ++K ++S+ L + +RGEIS ++ HS GH Y ++KD+ +RI A+ Sbjct: 1 MKDKYLTVTALTKYVKRKMDSDPHLRDIWLRGEISNFKH-HSRGHMYLTIKDDSARIQAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + K+ F PE G+ L+ G+I+ F +YQ+ I + P G G+L A E+ K++L Sbjct: 60 MFASSNRKLLFHPENGMNVLIRGEISVFEAYGQYQLYIHEMEPDGIGSLYQAFEQLKERL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++G F+D++K PIP PK IAVITSPTGA IRDIL + R+P +++ +FPV VQG++ Sbjct: 120 HKQGYFADEYKKPIPRYPKNIAVITSPTGAAIRDILTTMKRRYPSVKITVFPVLVQGNQA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 IA +I Q ++L D+II+ RGGGSIE+LW FN+E + RAI S PIISA Sbjct: 180 KASIARSIQQADSL-------SYDVIIVGRGGGSIEELWSFNEEEVARAIFESKTPIISA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T++D+ ADLRAPTPT A E+AVP + L + + +L ++ + I Sbjct: 233 VGHETDTTISDFVADLRAPTPTAAGELAVPSQVELLDKIEIQKRQLARLLKQYISQHETI 292 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ L + Q + LD L+ ++ + NH+I R+ S Sbjct: 293 LHQLRQTYAFKYPHQLVKQKEQELDSTMDNLQRRMKSKVSDDKLTHNHLIKRLSSQHPQR 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ + + + + + + ++ + Sbjct: 353 ELRLAIDKL----RQLHSLQNKMMNNYLEQQSQ--------------------------- 381 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + L +KRGY + + I ++L Sbjct: 382 ----------------RLYSQIDKLSLVNPLEIMKRGYALPYNEDGALIKSVKHLHINDT 425 Query: 485 ILINFFDGQANAIVINKAPPKE 506 I + DG+ V E Sbjct: 426 IQLRIADGEVTGKVTAIKEANE 447 >gi|15835222|ref|NP_296981.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum Nigg] gi|270285393|ref|ZP_06194787.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum Nigg] gi|270289407|ref|ZP_06195709.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum Weiss] gi|301336790|ref|ZP_07224992.1| exodeoxyribonuclease VII large subunit [Chlamydia muridarum MopnTet14] gi|14194733|sp|Q9PK65|EX7L_CHLMU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|7190643|gb|AAF39436.1| exodeoxyribonuclease, large subunit [Chlamydia muridarum Nigg] Length = 516 Score = 332 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 164/514 (31%), Positives = 250/514 (48%), Gaps = 28/514 (5%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ P VS L+ +K+++E N V V+GE+S + +SGH YF++KD+ + ++ Sbjct: 2 SITSPPVEVSVLTDSIKNLLEKNFLRVVVKGELSNV-SLQTSGHLYFAIKDSKAVLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L SG G LL E+RK++L Sbjct: 61 FHFRSKYFDRRPKDGDYVILHGKLTVYAPRGQYQIVAYALTFSGEGNLLQQFEERKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EG F + K IP + I VITSPTGAVI+DIL+ +S R +VI++PV VQG Sbjct: 121 AEGYFDPKRKRQIPSEARTIGVITSPTGAVIQDILRVLSRRCHQFQVILYPVTVQGPTAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI+ AI N + D +I+ARGGGSIEDLW FN+E++V+AIA SSIPIISA+ Sbjct: 181 QEISRAIQVFNQ-----ENIKIDTLIVARGGGSIEDLWAFNEEILVKAIAASSIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+AAD+RAPTP+ AAE+ E L NL L++ + I K N L Sbjct: 236 GHETDFTLCDFAADVRAPTPSAAAEIVCKSSEQYHQELQNLLRHLSSHSRQFIAAKKNLL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + K L +D ++ LD LE L+ + +H +KSD LI + Sbjct: 296 SHWKKHLATAD-FYHTAQQTLDYTRLSLERTLDAKLEHYKQHLAQYKRWLKSDILIRVEK 354 Query: 368 K-----------NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI--- 413 + + + + Q+ + + + L Q R+ Sbjct: 355 HLSNLNQALESAIKNKLYSNKVSLHQLYTSRFKNELPNLQHRTQHAKHLLNQLSRRLHFV 414 Query: 414 -----FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 +L F++ H + + S KN LKRG+ + D Sbjct: 415 MANSQETKLQRFARLQEEFSFMIQHLLTKAKERCQSVQEQMASLNPKNVLKRGFAQLFDF 474 Query: 469 NNN-FITQKRNLATKTRILINFFDGQANAIVINK 501 N + I +L + + DG+A V Sbjct: 475 NKHSVIISAESLKQSDLVRVCLQDGEAVLSVKEV 508 >gi|325569746|ref|ZP_08145770.1| exodeoxyribonuclease VII large subunit [Enterococcus casseliflavus ATCC 12755] gi|325157051|gb|EGC69217.1| exodeoxyribonuclease VII large subunit [Enterococcus casseliflavus ATCC 12755] Length = 450 Score = 332 bits (852), Expect = 7e-89, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 244/498 (48%), Gaps = 62/498 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ ++K V+ L V + GEIS +R + H YFSLKD+ ++I + Sbjct: 1 MAQEYLTVTALTKYIKRKFDVDPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG +K+ F PEEG++ + +G+IT + S YQ++I+ + P G G L A E+ K+KL Sbjct: 59 MFKGAFDKLRFQPEEGMKVMAVGRITLYEASGNYQMVIDHMEPDGVGALYQAYEQLKQKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS ++ +P PK IAV+TSP+GAVIRDI+ R+P+ +++++P VQG++ Sbjct: 119 AAEGLFSAPKQS-LPKYPKRIAVLTSPSGAVIRDIITTTQRRYPIAQIVLYPTVVQGNKA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++ I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFDAKTPVISS 231 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL + I+YK Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEERQARLEQAFMHQIQYKQER 291 Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + ++ L+ +++ K RH +I+R+ Sbjct: 292 YQRVIGSYVFRQPERLYEAQSIKLDQLQQRMQQGLQTLLYDKDRHAQQLISRLAQQQPKA 351 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q + Q + Q + + +K + + Sbjct: 352 RLQASNQEVSYLSQRLMKAMKDIYAAKENQFANAVQS----------------------- 388 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + RGY+ N I + + + Sbjct: 389 ------------------------LDLLSPLKIMGRGYSYTT-KNEQVIKSIDTIEPEDQ 423 Query: 485 ILINFFDGQANAIVINKA 502 + I++ DGQA VI+ Sbjct: 424 LTIHYQDGQALVEVISTE 441 >gi|320528398|ref|ZP_08029560.1| exodeoxyribonuclease VII, large subunit [Solobacterium moorei F0204] gi|320131312|gb|EFW23880.1| exodeoxyribonuclease VII, large subunit [Solobacterium moorei F0204] Length = 469 Score = 332 bits (851), Expect = 8e-89, Method: Composition-based stats. Identities = 137/498 (27%), Positives = 217/498 (43%), Gaps = 41/498 (8%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + VS L +LK +++ N L V + GEIS R SGH YFSLKD+H+ + + Sbjct: 1 MSRRIVPVSTLVNYLKKVMDENPVLHGVMIEGEISNIRM-PYSGHWYFSLKDDHATLKCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ K+ F PE G + ++ G ++ + Q+I ++ SG G L E KKKL Sbjct: 60 MFSSANQKLGFKPENGDKVVLKGDVSVYVVDGSMQMIATNMERSGIGQLYQQFELLKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF ++K P+P P IA++T A D L + R+P+ ++ +P VQG + Sbjct: 120 SDEGLFDVRYKKPLPAYPMDIALVTGNNTAAREDALITLKKRWPIAKLTEYPAPVQGMDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I A+ + +I+L RGGGSIEDLW FNDE + R I PI++ Sbjct: 180 APKIITALQAADDGNHQ-------VIMLVRGGGSIEDLWCFNDEALARYIFQMKTPIVTG 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHE D+TL D+ +D RA TPTGA E VP + + ++L N +RL N + + Sbjct: 233 IGHEIDFTLVDFVSDYRANTPTGAVEATVPDIQEVLATLQNSRSRLMNAMRNTFMHAKKR 292 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L ++ LD L K F + Sbjct: 293 FVYNASQPVLAKPERLYRDYITHLDYLA------------EKLIRFQEL----------- 329 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + R + +K Q++++ + +E L + K + + + Sbjct: 330 -PKDKRHELNDKFHRFSQLIRERSTALHESIQEDKQRLLIY---AKQSVQSNKNLLIQYQ 385 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++++ LS T + +L +++ L RGY+ NN + L Sbjct: 386 SQMKHTLSITADDRRTKLEKNMSLLNAYSPLLVLNRGYSVTY-KNNKVVNTTDILEIGDE 444 Query: 485 ILINFFDGQANAIVINKA 502 I I DG AIV K Sbjct: 445 INIRLADGTVGAIVQTKE 462 >gi|157828879|ref|YP_001495121.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str. 'Sheila Smith'] gi|157801360|gb|ABV76613.1| exodeoxyribonuclease VII large subunit [Rickettsia rickettsii str. 'Sheila Smith'] Length = 457 Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats. Identities = 178/486 (36%), Positives = 258/486 (53%), Gaps = 54/486 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E+SVSE+S +K ++E+N ++ V+GEISG + I +SGHAYF+LK+N + + W+ Sbjct: 24 TKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IANSGHAYFNLKENTAILACTCWRP 82 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G +L L +RK +L + G Sbjct: 83 ILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVDNLQPTGLGAMLQILNERKARLEKAG 142 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ EIA Sbjct: 143 LFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSGNEIA 201 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE Sbjct: 202 EAIEGFNNLEE---VNKPRVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEV 258 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 259 DYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLQSYEKILLNNTSRLIKYHEQNIVNYN 318 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 K ++ + LD L L I Sbjct: 319 KIHRYLSHYINNRQQLLDETGFNLLDALPCFIEL-------------------------- 352 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++ KI R I Y + + Sbjct: 353 -----------------------QETKIKSFSKERVNPAKIINYKTLELTHQTAYLSKSA 389 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I F D Sbjct: 390 NNTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVKGETGNFLSSKITAANEKIFNIKFSD 449 Query: 492 GQANAI 497 G+ + Sbjct: 450 GEIKVV 455 >gi|76809216|ref|YP_332496.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 1710b] gi|76578669|gb|ABA48144.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1710b] Length = 510 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 227/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 71 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 129 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 130 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 189 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 190 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 249 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 250 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 303 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 304 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 363 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + +L L + F+ + R + + + RQ + Sbjct: 364 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 421 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q ++ +++ Sbjct: 422 AFAQRLDATLQRR----------------------------------------------- 434 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 ++ V+ L+ + + TL+RGY ++ D + +L + R+ ++ +G Sbjct: 435 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 494 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 495 ADVSLADVQP 504 >gi|257869056|ref|ZP_05648709.1| exonuclease VII [Enterococcus gallinarum EG2] gi|257803220|gb|EEV32042.1| exonuclease VII [Enterococcus gallinarum EG2] Length = 450 Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats. Identities = 144/498 (28%), Positives = 236/498 (47%), Gaps = 62/498 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R + H YFSLKD+ ++I + Sbjct: 1 MAQQYLTVTALTKYLKRKFDADPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG +K+ F PEEG++ L +G+I+ + S YQ+ IE + P G G L A E+ KKKL Sbjct: 59 MFKGAFDKLRFQPEEGMKVLAVGRISLYEASGNYQMYIEHMEPDGVGALYQAYEQLKKKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS K +P PK IAV+TSP+GAVIRDI+ R+P+ +++FP VQGD+ Sbjct: 119 AEEGLFSAPKKI-LPRFPKRIAVLTSPSGAVIRDIITTAQRRYPIAEIVLFPTVVQGDKA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++ I ++ D +I+ RGGGSIEDLW FN+E + RAI + P+IS+ Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFAAETPVISS 231 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + + RL + I+ K Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEEKQTRLEQAFMYQIQRKQER 291 Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ +LD+L + + +L+ ++ K + + +I+R++ Sbjct: 292 FQRAVGSYIFRQPERLYEAQAIKLDQLQQRMNQSLQTQLYDKEKVASQLIHRLEQQLPKA 351 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + Q + Q +E+ ++ + Sbjct: 352 RLSAAGQEVTYLTQRLEKAIQLSVEKKEQ------------------------------- 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + L + + RGY+ + + ++ Sbjct: 381 ----------------RFLSALQSLDLLSPLKIMGRGYSFTT-KDEQVVKTIADIEAGDE 423 Query: 485 ILINFFDGQANAIVINKA 502 + +++ DGQA VI Sbjct: 424 LNVHYQDGQALVKVIATE 441 >gi|306841706|ref|ZP_07474393.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO2] gi|306288236|gb|EFM59620.1| exodeoxyribonuclease VII, large subunit [Brucella sp. BO2] Length = 437 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 169/423 (39%), Positives = 255/423 (60%), Gaps = 2/423 (0%) Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ F PEEG+E + GK+TT+PGSSKYQI+IE + P+G+G L+ LE+RK++L EGLF Sbjct: 3 RLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLEERKRRLAAEGLFD 62 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194 K +PF+P++I V+TSPTGAVIRDI+ RIS R+PLRVI++PV+VQGD C E+A A+ Sbjct: 63 PALKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRVQGDTCGPEVAMAV 122 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N L + PRPD++I+ARGGGS+EDLW FNDE++VRA+A S IP+ISA+GHETDWT Sbjct: 123 NGFNALPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVGHETDWT 182 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D AAD+RAPTPTGAAEMAVPVK LQ++L + ARL++ + R K + +A+ Sbjct: 183 LIDLAADMRAPTPTGAAEMAVPVKADLQAALASQSARLSSTMSRFFDQKRQAHRAAARAM 242 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 P++DQ L+ R R D L L + +K HF+ ++ L + + + + Sbjct: 243 PSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRLLQRRLVELERGVT 302 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + + ++ LR + L E R + +++L R + + Sbjct: 303 MLGQRLPRALEAFLRERRTAFTHRANRLSP--EPILRRTRLTGSTLEQLDRRRDQAVRLL 360 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 I+ R++++ +Y++ L+RG+ + D + Q ++ + + F DG Sbjct: 361 IERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSPGDALSVRFRDGDV 420 Query: 495 NAI 497 + Sbjct: 421 GVV 423 >gi|108758486|ref|YP_632813.1| exodeoxyribonuclease VII large subunit [Myxococcus xanthus DK 1622] gi|108462366|gb|ABF87551.1| exodeoxyribonuclease VII, large subunit [Myxococcus xanthus DK 1622] Length = 500 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 137/505 (27%), Positives = 233/505 (46%), Gaps = 23/505 (4%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV EL+ LK +ES + V VRGE++G+RG ++ GH YFSLKD + ID +W Sbjct: 2 VLSVGELTRQLKQTLESRFARVIVRGEVTGFRGPNARGHWYFSLKDAGAAIDTKVWASMA 61 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F +G+E + G + + +Y +I++ L P G G L A E+ K++L +EGL Sbjct: 62 ARLRFALRDGMEVIAEGSVDLYEPQGRYSLIVQRLEPVGEGALALAFEQLKERLAQEGLI 121 Query: 134 SDQH---KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKE 189 P+P++P+ I V+TS TGA ++D L+ + R P + V++ +VQG+ E Sbjct: 122 GPGRVRPPRPLPYLPRRIGVVTSRTGAALQDFLRVLHSRNPRQSVLVADARVQGEGSAVE 181 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A AI +L D+I++ RGGGS+EDLW FN+E + RAI S +P++SAIGH Sbjct: 182 VARAIERLAR-------TDVDVIVVTRGGGSVEDLWTFNEERVARAIFASPVPVVSAIGH 234 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+T++D+ ADLRAPTP+ AAE PV L+ +L RL + R + Sbjct: 235 EIDFTISDFVADLRAPTPSAAAERLAPVLADLELTLATQAGRLRRAMERRVLELREEQGQ 294 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L L + + ++ R L + L + + R++ + + Sbjct: 295 LASRLEDPRRAINHQRLHLSEQVESMMRVLRPAVRGHREELRSLTERLQRARPQARLGEQ 354 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R H+L+ + + V+ + A L + R ++ + R+ Sbjct: 355 RAHLLKLAMRLSEAVRAGV--ATRHGALATARLGLERASPAAQVSRERARLAAHRARLLA 412 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILIN 488 + + L + + + RGY+ + + + ++ R+ + Sbjct: 413 LQQGALADAQKRFQRLEGRLDAMSPLKVMSRGYSVVFRQRDGAVVRTGADVQVGERLGLK 472 Query: 489 FF-DG--------QANAIVINKAPP 504 +G + A V P Sbjct: 473 LASNGAKSLGGCEEIEATVTAVKGP 497 >gi|42519421|ref|NP_965351.1| exonuclease VII large subunit [Lactobacillus johnsonii NCC 533] gi|81832191|sp|Q74IM1|EX7L_LACJO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|41583709|gb|AAS09317.1| exonuclease VII large subunit [Lactobacillus johnsonii NCC 533] Length = 456 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 143/500 (28%), Positives = 236/500 (47%), Gaps = 58/500 (11%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + SVS+L++++ +++ L V ++GE+S +R +S H YFSLKD S+I+ ++ Sbjct: 4 NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ K++F PEEG++ V G + + YQ +++ P+G G L L + ++KL Sbjct: 63 FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF+++HK IP P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS++ Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TLAD AD RA TPT AAE A P + + ++ L ARL + I K L Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLVDVLTQIVQLRARLYAAVQANIHTKHQIL 297 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + ++D L L ++ + + R+K+ Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLIHRLNQAMDNRLQHDGSTLRLLQERLKALSPSRK 357 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ L +++ Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +++ +K ++ + L + T+ RGY D N +T L ++ Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNIVTSVDQLKIDEKL 430 Query: 486 LINFFDGQANAIVINKAPPK 505 ++F DGQ V N K Sbjct: 431 KLHFKDGQVQVNVENIRREK 450 >gi|56478314|ref|YP_159903.1| exodeoxyribonuclease VII, large subunit [Aromatoleum aromaticum EbN1] gi|56314357|emb|CAI09002.1| exodeoxyribonuclease vII, large subunit [Aromatoleum aromaticum EbN1] Length = 458 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 125/491 (25%), Positives = 205/491 (41%), Gaps = 54/491 (10%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV+EL+ + +ES + V GE+S SGH YF+LKD +++ +W+ Sbjct: 21 VLSVAELNRLARQTLESRFPLLWVGGELSNLTRAP-SGHLYFTLKDAQAQVRCTMWRNRA 79 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G+ +T + +Q+ IE+L +G G L + K +L EGLF Sbjct: 80 QLLPFRPENGMRVEARALVTLYEVRGDFQLGIEALRQAGVGNLFETFVRLKDRLAGEGLF 139 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P P+ + V+TSP A D+L + R P L V+++P VQG+ +A Sbjct: 140 DAALKRALPRYPRRLGVVTSPAAAAWHDVLATLRRRAPHLEVVLYPAPVQGEAARTRLA- 198 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + D+++L RGGG IEDLW FNDE + RAI +P++S IGHETD Sbjct: 199 --EAVRVASARAATDGIDLLLLVRGGGGIEDLWAFNDENLARAIRACPVPVVSGIGHETD 256 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+AADLRA TPTGAAE+A + L +L L+ + + L+ Sbjct: 257 FTIADFAADLRAATPTGAAELASAGYHEACARLTSLGRTLSAALHYRLDTLAQRLDRAAL 316 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + L+ + R RL L + + R + + ++ R Sbjct: 317 RLVHPRERLAVAHERTARLGVRLAAAMSRRLERLHARNEQLC---------LRLEARRPD 367 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I + + ++ + R+ Sbjct: 368 IDREAERCARLA---------------------------------NRLVLAADRL----- 389 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 I + LQ A L RGY+ +D + + + + ++ + G Sbjct: 390 --IDRQSARLEGLAAHLQHLAPHAVLARGYSITRDAQGHILRTSAGVGSGEKVSVELATG 447 Query: 493 QANAIVINKAP 503 + +A V + Sbjct: 448 RLHATVNSTDA 458 >gi|300310499|ref|YP_003774591.1| exodeoxyribonuclease VII large subunit [Herbaspirillum seropedicae SmR1] gi|300073284|gb|ADJ62683.1| exodeoxyribonuclease VII, large subunit protein [Herbaspirillum seropedicae SmR1] Length = 438 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 138/490 (28%), Positives = 231/490 (47%), Gaps = 57/490 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +VS L+ + ++E N + V+GE+S + +SGH YF+LKD +++ A+++KG Sbjct: 2 LTVSALNQAVGRMLERNFPLLWVKGEVSNFT-RAASGHWYFNLKDEGAQVRAVMFKGRAQ 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 F+P EG + V +T + YQ+ +E++ SG G L A + K++L EGLF+ Sbjct: 61 YAGFMPREGDKVEVRTLVTLYAPRGDYQLNVEAIRRSGVGDLYAAFLQLKERLEREGLFA 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K +P P+ I ++TSP A +RD+L + R P + V+++P VQG+ + IA A Sbjct: 121 RERKRALPGFPRRIGIVTSPQAAALRDVLTTLRRRAPHVEVVLYPTPVQGEGAGQRIAAA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I + + E D++++ RGGGSIEDLW FN+E++ RAI +++P+IS +GHETD+ Sbjct: 181 IGRASERAE------CDVLLVCRGGGSIEDLWSFNEEVVARAIVAATMPVISGVGHETDF 234 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+AD+AADLRAPTPT AAE+A ++ + L A L + R + K +++ L + Sbjct: 235 TIADFAADLRAPTPTAAAELAASSRQDWLAELRGHAADLTRALRRTLADKAQSVDWLSRR 294 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + R +L L L H +I + R + +R+ R+ + Sbjct: 295 LVSPSAYIQHERVKLLALQNRLSHANQIPLTRMRHGLQQLASRLAHQLPDTR--HARRDL 352 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E + +++ + L +L Q Sbjct: 353 AELARRLQRAQGAQQSAQRQTLTTLHSQLELLNPQ------------------------- 387 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 R L+ RGY + D + LA ++ I I G Sbjct: 388 -------------RTLE---------RGYAIVSDHQGRVLHSPAELAARSEITIRLAQGS 425 Query: 494 ANAIVINKAP 503 A + + P Sbjct: 426 AEVGIASVQP 435 >gi|329725466|gb|EGG61949.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis VCU144] Length = 445 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 153/492 (31%), Positives = 238/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLELLKKKLKKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +V+ I N PIISA+GHET Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKTIFNCQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + E L+ I + I+++ LN + Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L R+L H L + + H + L I + Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q I + + +I+ + IT ++ Sbjct: 357 KQSIYQLHSRLSKIMSNN------------------------------------ITNLKT 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L +K++S L + + NT+ RGY + + +N +T L +I + Sbjct: 381 VLKNKLES-----------LNNLSPTNTMLRGYAIV-NKDNEVVTSTHKLNENDQISLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGSVDATVKKV 440 >gi|242242792|ref|ZP_04797237.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis W23144] gi|242233928|gb|EES36240.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis W23144] Length = 445 Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 151/492 (30%), Positives = 240/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQIDGIGNLYQKLEQLKKKLKKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +V+AI N PIISA+GHET Sbjct: 184 KKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKAIFNCQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + E L+ I + I+++ LN + Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L R+L L + + H + L I + Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNLLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q + + + +I+ + IT ++ Sbjct: 357 KQSVYQLHSRLSKIMSNN------------------------------------ITNLKT 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L +K+++ L + + NT+ RGY + + ++ IT L +I + Sbjct: 381 VLKNKLEN-----------LNNLSPTNTMLRGYAIV-NKDDEVITSTHKLNENDKISLTM 428 Query: 490 FDGQANAIVINK 501 DG +A+V Sbjct: 429 KDGSVDAMVKKV 440 >gi|62184936|ref|YP_219721.1| exodeoxyribonuclease VII large subunit [Chlamydophila abortus S26/3] gi|81312892|sp|Q5L6H1|EX7L_CHLAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|62148003|emb|CAH63754.1| probable exodeoxyribonuclease VII large subunit [Chlamydophila abortus S26/3] Length = 555 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 166/555 (29%), Positives = 261/555 (47%), Gaps = 69/555 (12%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + P +V+ L+ +K+++ESN H+ V+GE+S SGH YF +KD+ S ++ Sbjct: 2 ATSSPPQAVTTLTESIKNLLESNFCHIVVKGELSNVSLQP-SGHLYFGIKDSKSFLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L+ +G G LL E+ KK+L Sbjct: 61 FHFKSKYFDRRPKDGDSVIIHGKLTVYAPRGQYQIVAHALVYAGEGDLLQKFEETKKRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187 EG FS + K P+P IPK I VITSPTGAVI+DIL+ +S R + +V+I+PV VQG Sbjct: 121 AEGYFSIEKKQPLPRIPKCIGVITSPTGAVIQDILRILSRRCYQYKVLIYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 KEI+ AI +N D++++ARGGGSIEDLW FN+E+IV+AI S+IPIISA+ Sbjct: 181 KEISQAIEVMNR------DKLVDVLVIARGGGSIEDLWAFNEEIIVKAIDASTIPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+AAD+RAPTP+ A E+ + + LN +L+ K + Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAGEIVCQSSQEQIQIFKSHLRYLNAHAQQLLAGKAKQI 294 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI---- 363 + L + D LD L +E +++ + + + + ++SD L Sbjct: 295 QQWKRYLDHVD-FFRPPHQSLDYLRVSIERSIQTTLSQSKQRYRQYTRWLQSDILQRMTY 353 Query: 364 ---------------------------------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 HN Q+ RQ + I + + Q L Y Sbjct: 354 RLQDLWKMINLAFQNRLLALKHHCVHIKKNLVIHNTQQYRQRFDPCRDQIHRALSQRLGY 413 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI-------------------- 430 K +L + + + L R+ Sbjct: 414 FQQSLAHKQTLLKHFTTKINQLFIKETSALNLLKKRLNKAFVYTVCERREHFLYAKENLF 473 Query: 431 --LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILI 487 L+H ++ ++ L S KN LKRGY + D N N+ I ++L + + + Sbjct: 474 LSLNHLVERHRAKYHTVSQQLISLNPKNVLKRGYAMLFDFNENSAIISAKSLHKHSCVRV 533 Query: 488 NFFDGQANAIVINKA 502 DG+A V + Sbjct: 534 RLQDGEATLTVTDVQ 548 >gi|21231741|ref|NP_637658.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768133|ref|YP_242895.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. campestris str. 8004] gi|23821538|sp|Q8P8D9|EX7L_XANCP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|81305890|sp|Q4UVP8|EX7L_XANC8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|21113446|gb|AAM41582.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573465|gb|AAY48875.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. campestris str. 8004] Length = 446 Score = 330 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 134/493 (27%), Positives = 225/493 (45%), Gaps = 60/493 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + S+L+ + ++E + V V E+ +SGH YF+LKD ++I ++K Sbjct: 5 TEQILTPSQLNTLARDLLEGSFPLVWVEAELGNVT-RPASGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A E+ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFEELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G+F + K P+P + +AVITSP+GA +RD+L ++ RFP L V I P VQGD + Sbjct: 124 GVFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDILPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAHTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD +L+D+AAD+RAPTP+ AAE+ VP + L + + +ARL+ + + + + Sbjct: 238 ETDVSLSDFAADVRAPTPSVAAELLVPDQRELVARVRRAQARLSQLQQHTLGQAMQHADR 297 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L + R + R L ++ I+ R ++S Sbjct: 298 LALRLRARSPQARLQLLQRRQEDAARHLRARMQHILERLQARVQRAQAGVQSHSPQR--- 354 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 H+ QQ + Q + R+ Sbjct: 355 ----HLAPLQQRLRAAHPQ----------------------------------AAMQRRL 376 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486 + H + R L++ + T+ RGY + + + + + L R+ Sbjct: 377 Q--------QDHLHLRGLVRSLEAVSPLATVARGYAIVTRQADGSVVRSAAELTQGDRLR 428 Query: 487 INFFDGQANAIVI 499 DG +V Sbjct: 429 AQLADGSVTVVVD 441 >gi|227890286|ref|ZP_04008091.1| exonuclease VII large subunit [Lactobacillus johnsonii ATCC 33200] gi|227849100|gb|EEJ59186.1| exonuclease VII large subunit [Lactobacillus johnsonii ATCC 33200] Length = 453 Score = 330 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 143/500 (28%), Positives = 236/500 (47%), Gaps = 58/500 (11%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + SVS+L++++ +++ L V ++GE+S +R +S H YFSLKD S+I+ ++ Sbjct: 4 NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ K++F PEEG++ V G + + YQ +++ P+G G L L + ++KL Sbjct: 63 FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF+++HK IP P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS++ Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TLAD AD RA TPT AAE A P + + ++ L ARL + I K L Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLVDVLTQIVQLRARLYAAVQANIHTKRQIL 297 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + ++D L L ++ + + +K+ Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLTHRLNQAMDNRLQHDGSTLRLLQEHLKALNPSRK 357 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ L +++ Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +++ +K ++ + L + T+ RGY D N +T L ++ Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNTVTSVGQLKIDEKL 430 Query: 486 LINFFDGQANAIVINKAPPK 505 ++F DGQA V N K Sbjct: 431 KLHFKDGQAQVNVENIRREK 450 >gi|94309483|ref|YP_582693.1| exodeoxyribonuclease VII large subunit [Cupriavidus metallidurans CH34] gi|93353335|gb|ABF07424.1| exonuclease VII, large subunit [Cupriavidus metallidurans CH34] Length = 481 Score = 330 bits (847), Expect = 3e-88, Method: Composition-based stats. Identities = 136/501 (27%), Positives = 231/501 (46%), Gaps = 57/501 (11%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 SQ + VSEL++ + ++E + VRGEIS + +SGH YFSLKD ++I Sbjct: 33 SQPPTRTRDVIQVSELNHAIAGVLERSFPLAWVRGEISNFT-RAASGHWYFSLKDARAQI 91 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 ++++G ++F P EG V ++ + + Q+ +E++ +G G L A + K Sbjct: 92 RCVMFRGRNQHVDFSPREGEAVEVRALVSMYEARGELQLGVEAMRRAGLGNLYEAFLRLK 151 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQG 183 +KL + GLF + K PIP P++I V+TS A +RD+L + R + VI++PV VQG Sbjct: 152 EKLAQAGLFDTERKRPIPDHPRVIGVVTSLQAAAMRDVLTTLQRRAPHVPVIVYPVPVQG 211 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++IA + + +E D++IL RGGGSIEDLW FN+E++ AIA ++P+ Sbjct: 212 AGAAEKIAAMLDTASARRE------CDVLILCRGGGSIEDLWSFNEEVVAHAIARCAVPV 265 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +S +GHETD+T+AD+ AD+RAPTPTGAAE+ P + HL + L + R ++ + Sbjct: 266 VSGVGHETDFTIADFVADVRAPTPTGAAELVSPDRAHLLQATRRARDALAQAMDRQLERR 325 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L + L + L R ++D L R + L + + + + R ++ Sbjct: 326 AQHLEWLGRRLRSPQAQLQERRAQVDNLARHMRSALRDTVAVQRHRVDVLAMRWRACKP- 384 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + +L Sbjct: 385 ------------------------------------------------DIGAAQAELGRL 396 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R+ + + + ++ + L+ A + TL+RGY + D + L + Sbjct: 397 AARMAAAAARRHERETARLARASGALELLAPQRTLERGYAVLLDNRGRALRSPVELRAGS 456 Query: 484 RILINFFDGQANAIVINKAPP 504 + + DG A+ + Sbjct: 457 IVEAHLADGVADIEIAGVQAK 477 >gi|297207757|ref|ZP_06924192.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|296887774|gb|EFH26672.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 445 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLISVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|78048163|ref|YP_364338.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123757456|sp|Q3BSC5|EX7L_XANC5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|78036593|emb|CAJ24284.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 445 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 127/496 (25%), Positives = 223/496 (44%), Gaps = 60/496 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S +SGH YF+LKD ++I ++K Sbjct: 5 NDQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPASGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R R+L + ++ R ++++ Sbjct: 298 LALRLRAQSPQARLQLLHRRQQDAGRQLRARMMQVLERLQARVQQGQAQLQAHNPQRQ-- 355 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + QQ + + Q + R+ Sbjct: 356 -----LAGLQQRLRALHPQ----------------------------------AAMQRRL 376 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486 + + R L++ + T+ RGY + + + + + T R+ Sbjct: 377 QH--------DQLQLRSIARSLEAVSPLATVARGYAIVTRPADGSVVRSAAEVVTGERLR 428 Query: 487 INFFDGQANAIVINKA 502 DG V + Sbjct: 429 AQLADGSIQVRVESGE 444 >gi|57867013|ref|YP_188661.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis RP62A] gi|293366520|ref|ZP_06613197.1| exodeoxyribonuclease VII [Staphylococcus epidermidis M23864:W2(grey)] gi|81819389|sp|Q5HP29|EX7L_STAEQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|57637671|gb|AAW54459.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis RP62A] gi|291319289|gb|EFE59658.1| exodeoxyribonuclease VII [Staphylococcus epidermidis M23864:W2(grey)] gi|329735353|gb|EGG71645.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis VCU045] Length = 445 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 152/492 (30%), Positives = 237/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I +++KG Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISGMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLELLKKKLKKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +V+ I N PIISA+GHET Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKTIFNCQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + E L+ I + I+++ LN + Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L R+L H L + + H + L I + Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q I + + +I+ + IT ++ Sbjct: 357 KQSIYQLHSRLSKIMSNN------------------------------------ITNLKT 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L +K++S L + + NT+ RGY + + +N +T L +I + Sbjct: 381 VLKNKLES-----------LNNLSPTNTMLRGYAIV-NKDNEVVTSTHKLNENDQISLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGSVDATVKKV 440 >gi|329667054|gb|AEB93002.1| exonuclease VII large subunit [Lactobacillus johnsonii DPC 6026] Length = 456 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 145/500 (29%), Positives = 236/500 (47%), Gaps = 58/500 (11%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + SVS+L++++ +++ L V ++GE+S +R +S H YFSLKD S+I+ ++ Sbjct: 4 NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ K++F PEEG++ V G + + YQ +++ P+G G L L + ++KL Sbjct: 63 FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF+++HK IP P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS++ Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TLAD AD RA TPT AAE A P + + ++ L ARL I I K L Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLADVLTQIVQLRARLYAAIQANIHTKHQIL 297 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + ++D L L +E + + R+K+ Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLTHRLNQAIENRLQHDGSTLRLLQERLKALSPSRK 357 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ L +++ Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +++ +K ++ + L + T+ RGY D N +T L ++ Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNTVTSVDQLKIDEKL 430 Query: 486 LINFFDGQANAIVINKAPPK 505 ++F DGQ V N K Sbjct: 431 KLHFKDGQVQVNVENIRREK 450 >gi|82751128|ref|YP_416869.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus RF122] gi|123549248|sp|Q2YYB8|EX7L_STAAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|82656659|emb|CAI81085.1| probable exodeoxyribonuclease VII large subunit [Staphylococcus aureus RF122] Length = 445 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHIEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|15924513|ref|NP_372047.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus Mu50] gi|15927104|ref|NP_374637.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus N315] gi|21283205|ref|NP_646293.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MW2] gi|49483773|ref|YP_040997.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|49486360|ref|YP_043581.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57650480|ref|YP_186409.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus COL] gi|87160641|ref|YP_494168.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195330|ref|YP_500134.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221640|ref|YP_001332462.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156979842|ref|YP_001442101.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus Mu3] gi|161509752|ref|YP_001575411.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|221140056|ref|ZP_03564549.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253314893|ref|ZP_04838106.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732177|ref|ZP_04866342.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733227|ref|ZP_04867392.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus TCH130] gi|255006310|ref|ZP_05144911.2| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257425649|ref|ZP_05602073.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257428310|ref|ZP_05604708.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257430947|ref|ZP_05607327.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257433636|ref|ZP_05609994.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus E1410] gi|257436549|ref|ZP_05612593.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M876] gi|258411100|ref|ZP_05681380.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A9763] gi|258437356|ref|ZP_05689340.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A9299] gi|258443562|ref|ZP_05691901.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A8115] gi|258446769|ref|ZP_05694923.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A6300] gi|258448683|ref|ZP_05696795.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A6224] gi|258451181|ref|ZP_05699216.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A5948] gi|258453500|ref|ZP_05701478.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A5937] gi|262049109|ref|ZP_06021986.1| hypothetical protein SAD30_0266 [Staphylococcus aureus D30] gi|262051190|ref|ZP_06023414.1| hypothetical protein SA930_1621 [Staphylococcus aureus 930918-3] gi|269203153|ref|YP_003282422.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus ED98] gi|282893025|ref|ZP_06301259.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A8117] gi|282904106|ref|ZP_06311994.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus C160] gi|282905933|ref|ZP_06313788.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282908843|ref|ZP_06316661.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282914331|ref|ZP_06322117.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M899] gi|282919300|ref|ZP_06327035.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus C427] gi|282924625|ref|ZP_06332293.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus C101] gi|282924772|ref|ZP_06332439.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9765] gi|282928995|ref|ZP_06336582.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A10102] gi|283958288|ref|ZP_06375739.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|284024583|ref|ZP_06378981.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus 132] gi|293503406|ref|ZP_06667253.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 58-424] gi|293510422|ref|ZP_06669128.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M809] gi|293530962|ref|ZP_06671644.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M1015] gi|294848554|ref|ZP_06789300.1| exodeoxyribonuclease VII [Staphylococcus aureus A9754] gi|295428102|ref|ZP_06820734.1| exodeoxyribonuclease VII [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275120|ref|ZP_06857627.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MR1] gi|297590932|ref|ZP_06949570.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MN8] gi|300911838|ref|ZP_07129281.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus TCH70] gi|304380888|ref|ZP_07363548.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037076|sp|P67450|EX7L_STAAN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|54037077|sp|P67451|EX7L_STAAW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|54041042|sp|P67449|EX7L_STAAM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|73919344|sp|Q5HFP8|EX7L_STAAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|73919345|sp|Q6GGH5|EX7L_STAAR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|73919346|sp|Q6G942|EX7L_STAAS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|122539437|sp|Q2FY46|EX7L_STAA8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|123485721|sp|Q2FGL0|EX7L_STAA3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|166232368|sp|A7X2Q2|EX7L_STAA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|172048898|sp|A6QH68|EX7L_STAAE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|189037815|sp|A8Z463|EX7L_STAAT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|13701322|dbj|BAB42616.1| SA1354 [Staphylococcus aureus subsp. aureus N315] gi|14247294|dbj|BAB57685.1| probable exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus Mu50] gi|21204645|dbj|BAB95341.1| MW1476 [Staphylococcus aureus subsp. aureus MW2] gi|49241902|emb|CAG40596.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MRSA252] gi|49244803|emb|CAG43252.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MSSA476] gi|57284666|gb|AAW36760.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus COL] gi|87126615|gb|ABD21129.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202888|gb|ABD30698.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374440|dbj|BAF67700.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156721977|dbj|BAF78394.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|160368561|gb|ABX29532.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723966|gb|EES92695.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728767|gb|EES97496.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus TCH130] gi|257271343|gb|EEV03489.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257275151|gb|EEV06638.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257278377|gb|EEV09013.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257281729|gb|EEV11866.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus E1410] gi|257283900|gb|EEV14023.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M876] gi|257840250|gb|EEV64714.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A9763] gi|257848561|gb|EEV72549.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A9299] gi|257850968|gb|EEV74911.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A8115] gi|257854344|gb|EEV77293.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A6300] gi|257857961|gb|EEV80850.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A6224] gi|257861236|gb|EEV84049.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A5948] gi|257864231|gb|EEV86981.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus A5937] gi|259160827|gb|EEW45847.1| hypothetical protein SA930_1621 [Staphylococcus aureus 930918-3] gi|259162778|gb|EEW47343.1| hypothetical protein SAD30_0266 [Staphylococcus aureus D30] gi|262075443|gb|ACY11416.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus ED98] gi|269941014|emb|CBI49398.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus TW20] gi|282313460|gb|EFB43855.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus C101] gi|282317110|gb|EFB47484.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus C427] gi|282321512|gb|EFB51837.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M899] gi|282327107|gb|EFB57402.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331225|gb|EFB60739.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282589402|gb|EFB94493.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A10102] gi|282592779|gb|EFB97785.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9765] gi|282595724|gb|EFC00688.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus C160] gi|282764343|gb|EFC04469.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A8117] gi|283790437|gb|EFC29254.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|285817206|gb|ADC37693.1| Exodeoxyribonuclease VII large subunit [Staphylococcus aureus 04-02981] gi|290920230|gb|EFD97296.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M1015] gi|291095072|gb|EFE25337.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291466786|gb|EFF09306.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus M809] gi|294824580|gb|EFG41003.1| exodeoxyribonuclease VII [Staphylococcus aureus A9754] gi|295128460|gb|EFG58094.1| exodeoxyribonuclease VII [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575818|gb|EFH94534.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus MN8] gi|298694806|gb|ADI98028.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus ED133] gi|300886084|gb|EFK81286.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus TCH70] gi|302751355|gb|ADL65532.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340615|gb|EFM06549.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829913|emb|CBX34755.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315195425|gb|EFU25812.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus CGS00] gi|315198782|gb|EFU29110.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus CGS01] gi|320140591|gb|EFW32445.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320144128|gb|EFW35897.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus MRSA177] gi|323443195|gb|EGB00813.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus O46] gi|329314201|gb|AEB88614.1| Exodeoxyribonuclease 7 large subunit [Staphylococcus aureus subsp. aureus T0131] gi|329728441|gb|EGG64878.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 21189] gi|329730838|gb|EGG67216.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 21193] Length = 445 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|329942663|ref|ZP_08291442.1| exodeoxyribonuclease VII, large subunit [Chlamydophila psittaci Cal10] gi|332287258|ref|YP_004422159.1| exodeoxyribonuclease VII large subunit [Chlamydophila psittaci 6BC] gi|313847844|emb|CBY16838.1| probable exodeoxyribonuclease VII large subunit [Chlamydophila psittaci RD1] gi|325506549|gb|ADZ18187.1| exodeoxyribonuclease VII large subunit [Chlamydophila psittaci 6BC] gi|328814923|gb|EGF84912.1| exodeoxyribonuclease VII, large subunit [Chlamydophila psittaci Cal10] gi|328914504|gb|AEB55337.1| exodeoxyribonuclease VII, large subunit [Chlamydophila psittaci 6BC] Length = 555 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 167/555 (30%), Positives = 262/555 (47%), Gaps = 69/555 (12%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + P +V+ L+ +K+++ESN H+ V+GE+S SGH YF +KD+ S ++ Sbjct: 2 ATSSPPQAVTTLTESIKNLLESNFCHIVVKGELSNVSLQP-SGHLYFGIKDSKSFLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L+ +G G LL E+ KK+L Sbjct: 61 FHFKSKYFDRRPKDGDSVIIHGKLTVYAPRGQYQIVAHALVYAGEGDLLQKFEETKKRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187 EG FS + K P+P IPK I VITSPTGAVI+DIL+ +S R + +V+I+PV VQG Sbjct: 121 AEGYFSIEKKQPLPRIPKCIGVITSPTGAVIQDILRILSRRCYQYKVLIYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 KEI+ AI +N D++++ARGGGSIEDLW FN+E+IV+AI S+IPIISA+ Sbjct: 181 KEISQAIEVMNR------DKLVDVLVIARGGGSIEDLWAFNEEIIVKAIDASTIPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+AAD+RAPTP+ AAE+ + + LN +L+ K + Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAAEIVCQSSQEQIQIFKSHLRYLNAHAQQLLAGKAKQI 294 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI---- 363 + L + D LD L +E +++ + + + + ++SD L Sbjct: 295 QQWKRYLDHVD-FFRPPHQSLDYLRVSIERSIQTKLSQSKQRYMQYTRWLQSDILQRMTY 353 Query: 364 ---------------------------------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 HN Q+ RQ + I + + Q L Y Sbjct: 354 RLQDLWKMINLAFQNRLLALKHHCVHIKKNLVIHNTQQYRQRFDPCRDQIHRALSQRLGY 413 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI-------------------- 430 K +L + + + L R+ Sbjct: 414 FQQSLAHKQTLLKHFTTKINQLFIKETSALNLLKRRLNKAFVYTVCERREHFLYAKENLF 473 Query: 431 --LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILI 487 L+H ++ ++ L S KN LKRGY + D N N+ I ++L + + + Sbjct: 474 LSLNHLVERHRAKYHTVSKQLISLNPKNVLKRGYAMLFDFNENSAIISAKSLHKHSCVRV 533 Query: 488 NFFDGQANAIVINKA 502 DG+A V + Sbjct: 534 RLQDGEATLTVTDVQ 548 >gi|238021484|ref|ZP_04601910.1| hypothetical protein GCWU000324_01384 [Kingella oralis ATCC 51147] gi|237868464|gb|EEP69470.1| hypothetical protein GCWU000324_01384 [Kingella oralis ATCC 51147] Length = 469 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 124/516 (24%), Positives = 222/516 (43%), Gaps = 78/516 (15%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ ++ V V GE+S +SGH YF LKD+ +++ ++K Sbjct: 30 LSVSELNSIADELLGQQFLGVWVAGEVSNLT-RAASGHYYFLLKDDLAQVRCTLFKFAAA 88 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ EG V GKI + ++QI + + G G L E+ KKKL EGLF+ Sbjct: 89 RLAQPLREGEHIEVCGKIGIYAARGEFQINVNEVRQVGVGQLFERYERLKKKLDAEGLFA 148 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K +P P+ I V+TS A +RD++ + R P + ++++P VQG ++IA A Sbjct: 149 PERKQRLPENPQRIGVVTSLAAAALRDVVSTLRRRAPHIALVVYPTPVQGAGSEQQIAQA 208 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I + E D++I+ RGGGS+EDLW FN+E + RAIA+ ++P++S +GHETD+ Sbjct: 209 IRAADERAE------VDVLIVCRGGGSLEDLWAFNEEAVARAIADCALPVVSGVGHETDF 262 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TL D+ AD+RAPTPTGAAE+ P + L L N +AR + + + ++ L K Sbjct: 263 TLVDFVADVRAPTPTGAAELVSPNRAELLHKLANYQARFQAALQQRYQNAAQQMDFLAKQ 322 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + Q R ++ + +L + + + ++ + Sbjct: 323 LQHPRQKWQTQRAQVAQWHAQLTWAMGQQLGGQRHRLTQAAQALRGQQPDVA------RL 376 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ + + + + Sbjct: 377 QQRVERFQAALSFGWQ-------------------------------------------T 393 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + ++ ++ +L + + L+RG+ + + + +L + ++F G Sbjct: 394 RFQAASARLAKQADVLAAMSPHAVLERGFAIVHNARGQVVRDADSLKQGQTLHVSFAHGA 453 Query: 494 ANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 ++ V++ QG+LF Sbjct: 454 SDVQVLSLQ---------------------KQGDLF 468 >gi|258423177|ref|ZP_05686070.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9635] gi|257846627|gb|EEV70648.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9635] Length = 445 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 233/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDNANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|253996076|ref|YP_003048140.1| exodeoxyribonuclease VII large subunit [Methylotenera mobilis JLW8] gi|253982755|gb|ACT47613.1| exodeoxyribonuclease VII, large subunit [Methylotenera mobilis JLW8] Length = 409 Score = 330 bits (846), Expect = 4e-88, Method: Composition-based stats. Identities = 130/378 (34%), Positives = 209/378 (55%), Gaps = 8/378 (2%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 SQ+ + + SVSEL+ K+I+E + V GE+S + +SGH YFSLKD ++ Sbjct: 8 LSQEAATNAKVLSVSELNRMAKNILEQSFPLFWVSGEVSNFT-RAASGHWYFSLKDAGAQ 66 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++KG + ++F P EG + +T + +Q+ +E + +G G L A EK Sbjct: 67 VRCVMFKGRNSYVDFTPREGDKIEARATVTLYEARGDFQLTVEFVQRAGLGALFEAFEKL 126 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K+KL EGLF K IP PK I V+TS A +RD+L + R P + +II+P VQ Sbjct: 127 KRKLSNEGLFDASTKRAIPKHPKQIGVVTSADAAALRDVLTTLKRRMPNIPIIIYPTPVQ 186 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + IANAI + E D++I+ RGGGSIEDLW FN+E++ RAIA+ +IP Sbjct: 187 GKGVAQLIANAINTAHERAE------CDVLIICRGGGSIEDLWQFNEEVVARAIAHCNIP 240 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 IS +GHETD+T+ D+ AD+RA TPT AAE+A P +E + + L+ RL + ++ + Sbjct: 241 TISGVGHETDFTICDFVADIRAATPTAAAELATPSREDMLNKSNQLKLRLAKDMQFVLNH 300 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 K L+ L + L + Q ++ + ++ +L L H+ + RK ++ + ++ Sbjct: 301 KSQALDYLARRLISPSQQIAQQKTQVTQLAYRLNHSTNQQLQRKQQNLLRLNQNLQHLNP 360 Query: 363 IHNIQKNRQHILEKQQHI 380 + + + K +I Sbjct: 361 QAVLTRGYAFVQNKSGNI 378 Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 54/134 (40%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 +R+ +L K ++ + + ++++ K + + L +I T + +L R+ Sbjct: 275 SREDMLNKSNQLKLRLAKDMQFVLNHKSQALDYLARRLISPSQQIAQQKTQVTQLAYRLN 334 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + +++ ++ + LQ + L RGY +Q+ + N I L + + Sbjct: 335 HSTNQQLQRKQQNLLRLNQNLQHLNPQAVLTRGYAFVQNKSGNIINTSSQLLNGDEVTLT 394 Query: 489 FFDGQANAIVINKA 502 F G A A + Sbjct: 395 FGAGSAEANITKIK 408 >gi|257865768|ref|ZP_05645421.1| exonuclease VII [Enterococcus casseliflavus EC30] gi|257872103|ref|ZP_05651756.1| exonuclease VII [Enterococcus casseliflavus EC10] gi|257799702|gb|EEV28754.1| exonuclease VII [Enterococcus casseliflavus EC30] gi|257806267|gb|EEV35089.1| exonuclease VII [Enterococcus casseliflavus EC10] Length = 450 Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 244/498 (48%), Gaps = 62/498 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ ++K V+ L V + GEIS +R + H YFSLKD+ ++I + Sbjct: 1 MAQEYLTVTALTKYIKRKFDVDPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG +K+ F PEEG++ + +G+IT + S YQ++I+ + P G G L A E+ K+KL Sbjct: 59 MFKGAFDKLRFQPEEGMKVMAVGRITLYEASGNYQMVIDHMEPDGVGALYQAYEQLKQKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS ++ +P PK IAV+TSP+GAVIRDI+ R+P+ +++++P VQG++ Sbjct: 119 AAEGLFSAPKQS-LPKYPKRIAVLTSPSGAVIRDIITTTQRRYPIAQIVLYPTVVQGNKA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++ I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFDAKTPIISS 231 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL + I+YK Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEERQARLEQAFMHQIQYKQER 291 Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + ++ L+ +++ K R +I+R+ Sbjct: 292 YQRVIGSYVFRQPERLYEAQSIKLDQLQQRMQQGLQTLLYDKDRQAQQLISRLAQQQPKA 351 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q + Q + Q + + +K + + Sbjct: 352 RLQASNQEVSYLSQRLTKAMKDIYAAKENQFANAVQS----------------------- 388 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + RGY+ N I + + + Sbjct: 389 ------------------------LDLLSPLKIMGRGYSYTT-KNEQVIKSIDAIEPEDQ 423 Query: 485 ILINFFDGQANAIVINKA 502 ++I++ DGQA VI+ Sbjct: 424 LMIHYQDGQALVEVISTE 441 >gi|302333200|gb|ADL23393.1| putative exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus JKD6159] Length = 445 Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats. Identities = 147/492 (29%), Positives = 231/492 (46%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ + + ++ + Sbjct: 357 QQNNFQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|134296729|ref|YP_001120464.1| exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis G4] gi|134139886|gb|ABO55629.1| Exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis G4] Length = 460 Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats. Identities = 132/490 (26%), Positives = 231/490 (47%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + + GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAISTMLERSFPLLWIAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P L VI++P VQG +++ A+ Sbjct: 140 ERKRPLPVHPRAIGIVTSLQAAALRDVLTTLARRAPHLPVIVYPAPVQGAGAAEKLVAAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 QTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+A P + L L + L + R ++ + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELASPQRALLLRELSERQRALARCVARGLEQRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R +D+L L + + R + Sbjct: 314 VSPAERLQRQRVHVDQLAARLASAASRPV---------------------RDARARFALA 352 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + + R++ +++A+ R Sbjct: 353 QLRWQRARPDPAQARHVLAGLSQRLAVALQRRH--------------------------- 385 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 + VS L+ + + TL+RGY ++ D + L + R+ ++ +G Sbjct: 386 -ERDSARVSACAARLEVLSPQRTLERGYAALIDAQTGRAVRSPSALKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|282911162|ref|ZP_06318964.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282324857|gb|EFB55167.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|312438008|gb|ADQ77079.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus TCH60] Length = 445 Score = 330 bits (845), Expect = 5e-88, Method: Composition-based stats. Identities = 147/492 (29%), Positives = 231/492 (46%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N P ISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPTISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|157826084|ref|YP_001493804.1| exodeoxyribonuclease VII large subunit [Rickettsia akari str. Hartford] gi|166232361|sp|A8GPH1|EX7L_RICAH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157800042|gb|ABV75296.1| exodeoxyribonuclease VII large subunit [Rickettsia akari str. Hartford] Length = 444 Score = 330 bits (845), Expect = 5e-88, Method: Composition-based stats. Identities = 180/489 (36%), Positives = 260/489 (53%), Gaps = 54/489 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + E+SVSE+S +K ++E+N ++ V+GEISG + I SSGHAYF+LK+N + + Sbjct: 8 NQATKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILACTC 66 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+ L KI+F +GIE ++ GK++++ G+S+YQ+ +++L P+G G +L L RK +L Sbjct: 67 WRPILAKIKFPLNDGIEVVISGKLSSYAGNSRYQLSVDNLQPAGLGAMLQILNDRKARLE 126 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF+ PIPF+P I VITS TGAVI+DI+ RI RFP R+II+PV VQG+ Sbjct: 127 KEGLFNKIR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERFPTRIIIWPVSVQGENSSN 185 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA AI N L E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+G Sbjct: 186 EIAEAIEGFNNLAE---VNKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVG 242 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+TL D AAD RAPTPT AAE AVPV+ L ++L + E L N RLIKY + + Sbjct: 243 HEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNNTLHSYEKILLNNTSRLIKYHEHNII 302 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + K + + LD FN + + L Sbjct: 303 NYDKIHRYLSHYMDNRQQLLDETG-----------------FNLLDALLCFIEL------ 339 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ KI R + Y + + Sbjct: 340 --------------------------QETKIKSFSKERVNPAKILNYKTLELTHQTAYLS 373 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ +K+ + + + +L S Y N LKRG+ ++ NF++ K A + I Sbjct: 374 KSANNTLKNFEYKLELNSTLLASLDYNNVLKRGFAIVKGETGNFLSSKIAAANEKIFNIK 433 Query: 489 FFDGQANAI 497 F DG+ + Sbjct: 434 FSDGEIKVV 442 >gi|268319200|ref|YP_003292856.1| exodeoxyribonuclease VII, large subunit [Lactobacillus johnsonii FI9785] gi|262397575|emb|CAX66589.1| exodeoxyribonuclease VII, large subunit [Lactobacillus johnsonii FI9785] Length = 453 Score = 330 bits (845), Expect = 5e-88, Method: Composition-based stats. Identities = 144/500 (28%), Positives = 237/500 (47%), Gaps = 58/500 (11%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + SVS+L++++ +++ L V ++GE+S +R +S H YFSLKD S+I+ ++ Sbjct: 4 NKVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMNS-HQYFSLKDEKSKINVVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ K++F PEEG++ V G + + YQ +++ P+G G L L + ++KL Sbjct: 63 FRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLA 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF+++HK IP P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE Sbjct: 123 KEGLFNEEHKKKIPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS++ Sbjct: 183 DTIVAALQQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSV 237 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TLAD AD RA TPT AAE A P + + ++ L ARL + I K L Sbjct: 238 GHETDTTLADLVADARAATPTAAAEYATPNLVDVLTQIVQLRARLYAAVQANIHAKRQIL 297 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + ++D L L ++ + + R+K+ Sbjct: 298 DRLKNAPVLQEPTRIYDQQIQQVDMLTHRLNQAMDNRLQHDGSTLRLLQERLKALNPSRK 357 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ L +++ Sbjct: 358 LEQ-----------------------------------------------LERERNFVVS 370 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +++ +K ++ + L + T+ RGY D N +T L ++ Sbjct: 371 NLFSTMNNYLKDQRNRLNRAMQQLDDISPLKTISRGYVYTTDQKGNTVTSVDQLKIDEKL 430 Query: 486 LINFFDGQANAIVINKAPPK 505 ++F DGQA V N K Sbjct: 431 KLHFKDGQAQVNVENIRREK 450 >gi|190575214|ref|YP_001973059.1| exodeoxyribonuclease VII large subunit [Stenotrophomonas maltophilia K279a] gi|226697613|sp|B2FN41|EX7L_STRMK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|190013136|emb|CAQ46768.1| putative exodeoxyribonuclease VII large subunit [Stenotrophomonas maltophilia K279a] Length = 443 Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats. Identities = 131/495 (26%), Positives = 221/495 (44%), Gaps = 58/495 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++ + S+L+ + ++E + + V E+ G +SGH YF+LKD +++ A + Sbjct: 3 PRNNDILTPSQLNTLARDLLEGSFPAIWVEAEL-GSVARPASGHLYFTLKDARAQLRAAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F+P EG+ LV GK+T + +YQ++++ + +G G L A E+ K +L Sbjct: 62 FRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHMEEAGEGALRRAFEELKARLE 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF K P+P + +AVITSPTGA +RD+L + RFP L V + P VQG Sbjct: 122 AEGLFDPARKRPLPTHVQRLAVITSPTGAAVRDVLSVLGRRFPLLEVDLLPTLVQGSSAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I + R D+I+L RGGGS+EDLW FNDE + RAIA S P++SA+ Sbjct: 182 AQITRLLQA------ADASGRYDVILLTRGGGSLEDLWAFNDEALARAIAASRTPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD++L+D+AADLRAPTP+ AAE+ VP + L L AR+ + ++ + Sbjct: 236 GHETDFSLSDFAADLRAPTPSVAAELLVPDQRELALRLRRTAARMVQLQRHAMQQAMQRA 295 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + L R R L R L R+ H ++ Sbjct: 296 DRALLRLNAQSPQARLDLLRRRQLDLGRRLHAVFNQQQERRAARLRHAAAVLRGHHPQRQ 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + + ++ Sbjct: 356 LDAMQRRLAALRGRPQAAMQ---------------------------------------- 375 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTR 484 ++ + R L++ + T+ RGY+ + + + + + Sbjct: 376 -------RLLERDALRLRGLARSLEAVSPLATVARGYSILTRTDDGTLVRKVNQVQPGDA 428 Query: 485 ILINFFDGQANAIVI 499 + DG + V Sbjct: 429 LQARVGDGVIDVQVK 443 >gi|228476091|ref|ZP_04060799.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis SK119] gi|228269914|gb|EEK11394.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis SK119] Length = 445 Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats. Identities = 154/495 (31%), Positives = 236/495 (47%), Gaps = 61/495 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS L+ ++K+ + + L + ++GE+S ++ HSSGH YF++KD +S I A+++ Sbjct: 2 SEYLSVSTLTKYIKYKFDQDPHLQSILLKGELSNFK-KHSSGHLYFNVKDKNSVISAMMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG +K+ F P+EG E L+ +++ + YQI + + G G L LE+ K+KL + Sbjct: 61 KGNASKLTFDPKEGDEVLLEARVSVYERRGNYQIYVNKMEIDGIGNLYQKLEQLKEKLNK 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G+F+ HK IP PK IA++T+ TGA IRDI I R+P + I VQG Sbjct: 121 QGIFNQNHKKAIPRFPKKIAILTADTGAAIRDIHTTIDSRYPLVEKISISTLVQGINAKN 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I I +TL D IIL RGGGSIEDLW+FN+E +VRAI PIISA+G Sbjct: 181 DIIEKIKYADTL-------GVDTIILGRGGGSIEDLWNFNEEEVVRAIYECHTPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL+D+ AD+RA TPT AA +A P + L + L I +LI+ + L+ Sbjct: 234 HETDFTLSDFVADMRAATPTQAAVIATPDQYELIQQIHQYRFSLTKSIKQLIEKQHKQLD 293 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L R D L ++L L + I +K + + L +I Sbjct: 294 YLSSYYKFKQPTLLYEQQIQRRDDLEKKLTQRLTLNIEKKRNNITVLRQHFNIRRLNDSI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ I + + + LI Sbjct: 354 VQYQKMIRNNENRLINLTY------------------------------------NLINH 377 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + L +KI+ L + NT+ RGY+ I + +N IT +L + I Sbjct: 378 NKANLKNKIEQ-----------LNQLSPTNTMLRGYSII-NKDNKVITSTHDLNEQDEIT 425 Query: 487 INFFDGQANAIVINK 501 ++ DG +AIV Sbjct: 426 LSMKDGNIDAIVKKV 440 >gi|126455268|ref|YP_001065213.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 1106a] gi|242317050|ref|ZP_04816066.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1106b] gi|254296390|ref|ZP_04963847.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 406e] gi|254298214|ref|ZP_04965666.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 406e] gi|126228910|gb|ABN92450.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1106a] gi|157805939|gb|EDO83109.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 406e] gi|157808327|gb|EDO85497.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 406e] gi|242140289|gb|EES26691.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1106b] Length = 460 Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 227/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + +L L + F+ + R + + + RQ + Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q ++ +++ Sbjct: 372 AFAQRLDATLQRR----------------------------------------------- 384 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 ++ V+ L+ + + TL+RGY ++ D + +L + R+ ++ +G Sbjct: 385 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|148268008|ref|YP_001246951.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus JH9] gi|150394075|ref|YP_001316750.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus JH1] gi|257793600|ref|ZP_05642579.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9781] gi|258420096|ref|ZP_05683051.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9719] gi|295406646|ref|ZP_06816451.1| exodeoxyribonuclease VII [Staphylococcus aureus A8819] gi|297245771|ref|ZP_06929636.1| exodeoxyribonuclease VII [Staphylococcus aureus A8796] gi|189037813|sp|A6U1Z5|EX7L_STAA2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|189037814|sp|A5IT52|EX7L_STAA9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|147741077|gb|ABQ49375.1| Exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus JH9] gi|149946527|gb|ABR52463.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus JH1] gi|257787572|gb|EEV25912.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9781] gi|257843807|gb|EEV68201.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus A9719] gi|294968393|gb|EFG44417.1| exodeoxyribonuclease VII [Staphylococcus aureus A8819] gi|297177422|gb|EFH36674.1| exodeoxyribonuclease VII [Staphylococcus aureus A8796] gi|315129801|gb|EFT85791.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus subsp. aureus CGS03] gi|329727668|gb|EGG64124.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus 21172] Length = 445 Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKKPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|53718518|ref|YP_107504.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei K96243] gi|126440472|ref|YP_001057980.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 668] gi|217420070|ref|ZP_03451576.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 576] gi|237811128|ref|YP_002895579.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei MSHR346] gi|254181532|ref|ZP_04888129.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1655] gi|254187490|ref|ZP_04894002.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei Pasteur 52237] gi|254259099|ref|ZP_04950153.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1710a] gi|52208932|emb|CAH34871.1| putative exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei K96243] gi|126219965|gb|ABN83471.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 668] gi|157935170|gb|EDO90840.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei Pasteur 52237] gi|184212070|gb|EDU09113.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1655] gi|217397374|gb|EEC37390.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 576] gi|237505303|gb|ACQ97621.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei MSHR346] gi|254217788|gb|EET07172.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 1710a] Length = 460 Score = 329 bits (844), Expect = 6e-88, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 227/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + +L L + F+ + R + + + RQ + Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q ++ +++ Sbjct: 372 AFAQRLDATLQRR----------------------------------------------- 384 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 ++ V+ L+ + + TL+RGY ++ D + +L + R+ ++ +G Sbjct: 385 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|314936354|ref|ZP_07843701.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis subsp. hominis C80] gi|313654973|gb|EFS18718.1| exodeoxyribonuclease VII, large subunit [Staphylococcus hominis subsp. hominis C80] Length = 445 Score = 329 bits (844), Expect = 6e-88, Method: Composition-based stats. Identities = 154/495 (31%), Positives = 236/495 (47%), Gaps = 61/495 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS L+ ++K+ + + L + ++GE+S ++ HSSGH YF++KD +S I A+++ Sbjct: 2 SEYLSVSTLTKYIKYKFDQDPHLQSILLKGELSNFK-KHSSGHLYFNVKDKNSVISAMMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG +K+ F P+EG E L+ +++ + YQI + + G G L LE+ K+KL + Sbjct: 61 KGNASKLTFDPKEGDEVLLEARVSVYERRGNYQIYVNKMEIDGIGNLYQKLEQLKEKLNK 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G+F+ HK IP PK IA++T+ TGA IRDI I R+P + I VQG Sbjct: 121 QGIFNQNHKKAIPRFPKKIAILTADTGAAIRDIHTIIDSRYPLVEKISISTLVQGINAKN 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I I +TL D IIL RGGGSIEDLW+FN+E +VRAI PIISA+G Sbjct: 181 DIIEKIKYADTL-------GVDTIILGRGGGSIEDLWNFNEEEVVRAIYECHTPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL+D+ AD+RA TPT AA +A P + L + L I +LI+ + L+ Sbjct: 234 HETDFTLSDFVADMRAATPTQAAVIATPDQYELIQQIHQYRFSLTKSIKQLIEKQHKQLD 293 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L R D L ++L L + I +K + + L +I Sbjct: 294 YLSSYYKFKQPTLLYEQQIQRRDDLEKKLTQRLTLNIEKKRNNITVLRQHFNIRRLNDSI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ I + + + LI Sbjct: 354 VQYQKMIRNNENRLINLTY------------------------------------NLINH 377 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + L +KI+ L + NT+ RGY+ I + +N IT +L + I Sbjct: 378 NKANLKNKIEQ-----------LNQLSPTNTMLRGYSII-NKDNKVITSTHDLNEQDEIT 425 Query: 487 INFFDGQANAIVINK 501 ++ DG +AIV Sbjct: 426 LSMKDGNIDAIVKKV 440 >gi|302343361|ref|YP_003807890.1| exodeoxyribonuclease VII, large subunit [Desulfarculus baarsii DSM 2075] gi|301639974|gb|ADK85296.1| exodeoxyribonuclease VII, large subunit [Desulfarculus baarsii DSM 2075] Length = 448 Score = 329 bits (843), Expect = 7e-88, Method: Composition-based stats. Identities = 135/493 (27%), Positives = 223/493 (45%), Gaps = 55/493 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 VSEL LK E++ V V GE+SG R +SGH YFSLKD+ + A+++ Sbjct: 8 TPRQVLGVSELLNRLKKQAEASFDFVWVEGEVSGLR-RPASGHCYFSLKDDGGVLRAVMF 66 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + + F E+G L G+++ + + Q+++++ P G+G L A E+ K++L Sbjct: 67 RHQAGLLRFRLEDGQRVLCQGRLSVYVARGEVQLVVDTAEPLGAGALALAFEQLKRRLAA 126 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G+F + K P+P +P+ +AV+TSPTGA +RD L+ + R L V ++PV+VQG+ Sbjct: 127 QGVFDAERKKPLPELPRRVAVVTSPTGAALRDFLKVVERRGQRLEVAVYPVQVQGEAAAG 186 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++ A L E P++I+L RGGGS EDLW +NDE + AIA +P++SA+G Sbjct: 187 QMVVA------LAELAAWGWPEVIVLTRGGGSPEDLWAYNDEALALAIAACPLPVVSAVG 240 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD AADLRAPTPT AAE+ + +E L L L + R + + L Sbjct: 241 HEIDVTIADLAADLRAPTPTAAAELLLAGREELTLRLKAARQALAMAMARSLARRRVDLR 300 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L +A+ + + L+ R RLD + L + + + ++ R+ + + Sbjct: 301 HLRRAMADPRRRLADHRQRLDDVSARLLMAQRTALAGRQARLHRLVGRLAQARPERRLTQ 360 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + LR + Sbjct: 361 AQGRLEGLRGRLWAAMIARLRGRRAAAE-------------------------------- 388 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + L++ L RGY + D + + + A I + Sbjct: 389 ---------------LLRGRLRALGPLAVLGRGYALVFDEKGRLLREAAHTAPGRAIEVK 433 Query: 489 FFDGQANAIVINK 501 G A+V Sbjct: 434 LQHGALRAVVEEV 446 >gi|270159878|ref|ZP_06188534.1| exodeoxyribonuclease VII large subunit [Legionella longbeachae D-4968] gi|289165368|ref|YP_003455506.1| Exonuclease VII, large subunit [Legionella longbeachae NSW150] gi|269988217|gb|EEZ94472.1| exodeoxyribonuclease VII large subunit [Legionella longbeachae D-4968] gi|288858541|emb|CBJ12422.1| Exonuclease VII, large subunit [Legionella longbeachae NSW150] Length = 442 Score = 329 bits (843), Expect = 7e-88, Method: Composition-based stats. Identities = 144/494 (29%), Positives = 231/494 (46%), Gaps = 56/494 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +V++L+ +K +E+ L V V GE+S SGH YF+LKD+ ++I + + Sbjct: 3 TQIAILTVAQLNRQVKSYLENELGIVYVEGELSNL-SKPVSGHYYFTLKDDVAQIRCVYF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K + +G + G+++ + YQ+I+E + +G G L E+ K KL Sbjct: 62 KNRHSTATNKLSDGQHIIAGGRLSLYEARGDYQLIVEQVTEAGLGALYQRFEELKNKLAA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF+ +K PIP +P+ I V+TS TGA IRDIL ++ RFPL V+I+P +VQG + Sbjct: 122 EGLFASINKRPIPTMPRTIGVVTSTTGAAIRDILSTLARRFPLAHVLIYPSEVQGAGAAQ 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++ A+ + N R D+++LARGGGSIEDLW FNDE + R IA+SSIPII+ +G Sbjct: 182 QLIQALQRAN------EDKRSDVLLLARGGGSIEDLWAFNDEGLARQIASSSIPIITGVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD+ AD RA TPT AA A P L L + ARL + + R ++ L+ Sbjct: 236 HETDFTIADFVADYRAETPTAAAIAATPDCHELFKLLNHALARLQDAMHRFLQKYQIKLH 295 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L+ + + + +S D L R+L ++ II +K + +K+ I + Sbjct: 296 HLMDKISSPQKAISHYWQTTDYLERQLVSHMNSIIKQKKHQLHLFAINLKARNPKIQISQ 355 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++ + + Q++ + +L ++ Sbjct: 356 IQINLQQLSTQLIQLM--------------------------------QAKLNQLKYQLS 383 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 LS L + + TL RGY N + R + I + Sbjct: 384 TQLST---------------LHAVSPLATLDRGYAIATKKN-KVLLSSRQVHIGDAINVR 427 Query: 489 FFDGQANAIVINKA 502 G + Sbjct: 428 LAVGNLTCAITQIQ 441 >gi|27468122|ref|NP_764759.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis ATCC 12228] gi|251810936|ref|ZP_04825409.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis BCM-HMP0060] gi|282876055|ref|ZP_06284922.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis SK135] gi|31563112|sp|Q8CP38|EX7L_STAES RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|27315668|gb|AAO04803.1|AE016748_37 exodeoxyribonuclease large subunit [Staphylococcus epidermidis ATCC 12228] gi|251805616|gb|EES58273.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis BCM-HMP0060] gi|281295080|gb|EFA87607.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis SK135] gi|329737457|gb|EGG73711.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis VCU028] Length = 445 Score = 329 bits (843), Expect = 7e-88, Method: Composition-based stats. Identities = 153/492 (31%), Positives = 239/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLELLKKKLKKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+ +K IP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FNQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +V+ I N PIISA+GHET Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKTIFNCQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + E L+ I + I+++ LN + Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L R+L H L + + H + L I + Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q I + + +I+ + IT ++ Sbjct: 357 KQSIYQLHSRLSKIMSNN------------------------------------ITNLKT 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L +K++S L + + NT+ RGY + + +N +T L +I + Sbjct: 381 VLKNKLES-----------LNNLSPTNTMLRGYAIV-NKDNEVVTSTHKLNENDQISLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGSVDATVKKV 440 >gi|283470802|emb|CAQ50013.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus ST398] Length = 445 Score = 329 bits (843), Expect = 8e-88, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDNANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DVTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|283770600|ref|ZP_06343492.1| exodeoxyribonuclease 7 large subunit [Staphylococcus aureus subsp. aureus H19] gi|283460747|gb|EFC07837.1| exodeoxyribonuclease 7 large subunit [Staphylococcus aureus subsp. aureus H19] Length = 445 Score = 329 bits (842), Expect = 9e-88, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLIENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|282916794|ref|ZP_06324552.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus D139] gi|282319281|gb|EFB49633.1| exodeoxyribonuclease VII, large subunit [Staphylococcus aureus subsp. aureus D139] Length = 445 Score = 329 bits (842), Expect = 9e-88, Method: Composition-based stats. Identities = 149/492 (30%), Positives = 232/492 (47%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++KH + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKHKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDTIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLIENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|319400859|gb|EFV89078.1| exodeoxyribonuclease VII, large subunit [Staphylococcus epidermidis FRI909] Length = 445 Score = 329 bits (842), Expect = 9e-88, Method: Composition-based stats. Identities = 151/492 (30%), Positives = 241/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVNKMQIDGIGNLYQKLEQLKKKLKKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+ +K IP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FNQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTINNRYPLVEQIQISTLVQGTQARQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +V+AI N PIISA+GHET Sbjct: 184 EKIQYADSL-------DVDTIIVGRGGGSIEDLWNFNEEDVVKAIFNCQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + E L+ I + I+++ LN + Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELLQQIKQYEYTLSRYIKQYIEHQKKQLNHIS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L R+L L + + H + L I + Sbjct: 297 SYYKFKQPSLLYDQQIQKRDELERQLNLLLNTKVEKSKHHLKLLQQSFNFKNLNQQITQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q + + + +I+ + IT ++ Sbjct: 357 KQSVYQLHSRLSKIMSNN------------------------------------ITNLKT 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L +K+++ L + + NT+ RGY + + ++ IT L +I + Sbjct: 381 VLKNKLEN-----------LNNLSPTNTMLRGYAIV-NKDDEVITSTHKLNENDKISLTM 428 Query: 490 FDGQANAIVINK 501 DG +A+V Sbjct: 429 KDGSVDAMVKKV 440 >gi|58337604|ref|YP_194189.1| exodeoxyribonuclease VII large subunit [Lactobacillus acidophilus NCFM] gi|227904244|ref|ZP_04022049.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus acidophilus ATCC 4796] gi|81311437|sp|Q5FJG6|EX7L_LACAC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|58254921|gb|AAV43158.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus acidophilus NCFM] gi|227867892|gb|EEJ75313.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus acidophilus ATCC 4796] Length = 455 Score = 329 bits (842), Expect = 9e-88, Method: Composition-based stats. Identities = 139/507 (27%), Positives = 249/507 (49%), Gaps = 58/507 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V G ++ + YQ E++ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQVKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ +HK IP P IAV+TS +GAVI DI+ + RFP + +FP +VQGD Sbjct: 121 AKEGLFNPEHKKKIPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + N +P+IS+ Sbjct: 181 AESLVRAMRQIAA-----EGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQVYNMQMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L++RL + + +I+ K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLMDELAGIHQLQSRLFSSMQTIIRQKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + +DRL + L+++++ + + + + R+ + Sbjct: 296 LNRIQNSIIMREPTRLYDQQIETVDRLKQRLQNSMQNKLDHSKQDYRLLNQRLFAVNPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + +Q L + + ++ +L+ Sbjct: 356 QINQMKQQRLFLAKRLSDNMQHYLKDK--------------------------------- 382 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + L ++ TL+RG+ D + I+ + + Sbjct: 383 --------------RNIFAQIVQQLDDYSPLKTLERGFVYTTDRDGKTISSVKQVNKNDS 428 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + ++F DGQ A V+ K +K Sbjct: 429 LNLHFKDGQVAAKVVEVKEEKNANEEK 455 >gi|226192868|ref|ZP_03788481.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei Pakistan 9] gi|225935118|gb|EEH31092.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei Pakistan 9] Length = 460 Score = 329 bits (842), Expect = 9e-88, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 226/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + +L L + F+ + R + + + RQ + Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q ++ +++ Sbjct: 372 AFAQRLDATLQRR----------------------------------------------- 384 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 ++ V+ L+ + + TL+RGY ++ D + +L + R+ ++ +G Sbjct: 385 LERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + P Sbjct: 445 ADVSFADVQP 454 >gi|315038643|ref|YP_004032211.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylovorus GRL 1112] gi|312276776|gb|ADQ59416.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylovorus GRL 1112] Length = 452 Score = 329 bits (842), Expect = 1e-87, Method: Composition-based stats. Identities = 138/498 (27%), Positives = 243/498 (48%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V G ++ + YQ E++ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ HK +P P IAV+TS +GAVI DI+ + RFP + ++P +VQGD Sbjct: 121 AKEGLFNQDHKRRLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS+ Sbjct: 181 ADSLVRAMHQI-----AEQGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQIYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L +RL + + +I+ K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIREKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + +DRL L ++++ ++ + + + R+ S Sbjct: 296 LNRVKNSVIMREPTRLYDQQIETVDRLKDSLHNSMQNMVDHSKQSYLLLKQRLFSASPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q+ +Q + + ++ + Sbjct: 356 QMQQMQQQERFLAKRLADNMQHY------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K S S T + L ++ TL+RG+ D N ++ + + + Sbjct: 379 ----------LKDKRNSFSKTVQQLDDYSPLKTLERGFVYTTDANGKTVSSVKQVKKQES 428 Query: 485 ILINFFDGQANAIVINKA 502 + ++F DGQ A V Sbjct: 429 LNLHFKDGQVEATVTKIE 446 >gi|312869988|ref|ZP_07730127.1| exodeoxyribonuclease VII, large subunit [Lactobacillus oris PB013-T2-3] gi|311094573|gb|EFQ52878.1| exodeoxyribonuclease VII, large subunit [Lactobacillus oris PB013-T2-3] Length = 449 Score = 329 bits (842), Expect = 1e-87, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 240/500 (48%), Gaps = 63/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +VS+L+ +LK + + L V + GE+S +R SGH YFSLKD+ + IDA+++ Sbjct: 4 SKYLTVSQLTKYLKLKFDRDPYLQTVYLTGELSNFRLR--SGHQYFSLKDDQAVIDAVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + +K++F PEEG++ V G + + S +YQI I+++ P G G+L A E+ KKKL Sbjct: 62 RSQFSKVKFTPEEGMKLCVTGHVGLYERSGRYQIYIDTMEPDGVGSLYLAFEQLKKKLNA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLFS K +P P+ IAV+TS GAVIRDI + R+P+ +V++FP VQG++ Sbjct: 122 EGLFSRPKKA-VPLFPRRIAVVTSLNGAVIRDINTTVRRRYPIAQVVLFPTVVQGEKAAA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA I + D +I+ RGGGSIEDLW FN+E++ RAIA+ +P+IS++G Sbjct: 181 DIARQIKR------AGERGDFDTLIIGRGGGSIEDLWPFNEEVVARAIADCPLPVISSVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD T+AD AD RA TPT AAE+A P + ++ + + + RL N + I ++ L Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPQRLDNTLMLISDFQQRLYNTMRAQIDFEKKQL 294 Query: 308 NSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ++D+L ++L E + + NR+ + Sbjct: 295 AKLTDSYIFQQPTRLYENYAQKVDQLTQQLRQQQECRLTNAANDVAQVYNRLLAYNPQRL 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + R + + ++ + + + + Sbjct: 355 VDQERLTVQQLAARLQTAAQAKTQQTAQQLQALT-------------------------- 388 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L S ++RGYT + N + Q L T + Sbjct: 389 ---------------------KQLHSLDPLKIMERGYTYVTR-NGKVVNQAAQLNTGEPL 426 Query: 486 LINFFDGQANAIVINKAPPK 505 L++F DG+ + + K Sbjct: 427 LLHFADGEVTVTITDIKEKK 446 >gi|188991270|ref|YP_001903280.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. campestris str. B100] gi|226697621|sp|B0RRZ3|EX7L_XANCB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|167733030|emb|CAP51228.1| exodeoxyribonuclease VII large subunit [Xanthomonas campestris pv. campestris] Length = 446 Score = 329 bits (842), Expect = 1e-87, Method: Composition-based stats. Identities = 133/493 (26%), Positives = 224/493 (45%), Gaps = 60/493 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + S+L+ + ++E + V V E+ +SGH YF+LKD ++I ++K Sbjct: 5 TEQILTPSQLNTLARDLLEGSFPLVWVEAELGNVT-RPASGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A E+ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRLTLYEARGDYQLVLDHMEEAGEGALRRAFEELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G+F + K P+P + +AVITSP+GA +RD+L ++ RFP L V I P VQGD + Sbjct: 124 GVFDAERKQPLPAHVRRLAVITSPSGAAVRDVLSVLARRFPLLEVDILPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAHTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD +L+D+AAD+RAPTP+ AAE+ VP + L + + +ARL+ + + + + Sbjct: 238 ETDVSLSDFAADVRAPTPSVAAELLVPDQRELVARVRRAQARLSQLQQHTLGQAMQHADR 297 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + + R + R L ++ I+ R ++S Sbjct: 298 LALRLRARSPQARPQLLQRRQEDAARHLRARMQHILERLQARVQRAQAGVQSHSPQR--- 354 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 H+ QQ + Q + R+ Sbjct: 355 ----HLAPLQQRLRAAHPQ----------------------------------AAMQRRL 376 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486 + H + R L++ + T+ RGY + + + + + L R+ Sbjct: 377 Q--------QDHLHLRGLVRSLEAVSPLATVARGYAIVTRQADGSVVRSAAELTQGDRLR 428 Query: 487 INFFDGQANAIVI 499 DG +V Sbjct: 429 AQLADGSVTVVVD 441 >gi|161523932|ref|YP_001578944.1| exodeoxyribonuclease VII large subunit [Burkholderia multivorans ATCC 17616] gi|189351307|ref|YP_001946935.1| exodeoxyribonuclease VII large subunit [Burkholderia multivorans ATCC 17616] gi|221211445|ref|ZP_03584424.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD1] gi|160341361|gb|ABX14447.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans ATCC 17616] gi|189335329|dbj|BAG44399.1| exodeoxyribonuclease VII [Burkholderia multivorans ATCC 17616] gi|221168806|gb|EEE01274.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD1] Length = 460 Score = 329 bits (842), Expect = 1e-87, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 232/490 (47%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + + GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF+P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++ A+ Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLVAAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 QTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+A P + L L E L + R ++ + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELASPQRALLLRELAERERALARALARGLEQRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R + +L L + + R + Sbjct: 314 VSPAERLQRQRAHVGQLAVRLATAAARPV---------------------RDARARFALA 352 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + + H R++ +++A+ R Sbjct: 353 QLRWQRARPDPAHARHVLAGLSQRLAVALQRRH--------------------------- 385 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 + V+ L+ + + TL+RGY ++ D + L + R+ ++ +G Sbjct: 386 -ERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|262199955|ref|YP_003271164.1| exodeoxyribonuclease VII large subunit [Haliangium ochraceum DSM 14365] gi|262083302|gb|ACY19271.1| exodeoxyribonuclease VII, large subunit [Haliangium ochraceum DSM 14365] Length = 501 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 129/500 (25%), Positives = 214/500 (42%), Gaps = 55/500 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + SVS+ +++ + V + GEI+ SSGH YFSLKD S++ A Sbjct: 14 RPGSRERPLSVSQTVGAAGRVLQQRIGTVWIEGEIASL-SRPSSGHLYFSLKDQRSQMRA 72 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++W+ ++ F E+G G++ + K+Q + P+G G ALE+ K+K Sbjct: 73 VMWRSAAQRLRFRIEDGQTLRCHGELGIYERDGKFQFYAKYAEPAGLGAEALALEQLKRK 132 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186 L EGLF + K P+P +P+ I ++TS +GA +RD+++ + RFP+ +++ VQG E Sbjct: 133 LAAEGLFDEARKRPLPPLPRRIGLVTSKSGAAVRDVIRAVQRRFPVPILVADAVVQGREA 192 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P I A+ + D++I+ RGGG+ DL FNDE +VRA+A +P+ISA Sbjct: 193 PARIVRALRAI-------AQTDVDLVIVGRGGGAASDLAAFNDEQVVRAVAACPVPVISA 245 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D +L D AAD RA TPT A EMAVPV L + L+ E Sbjct: 246 VGHEIDMSLTDLAADRRAATPTAAGEMAVPVLADLAALLVEEER---------------- 289 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L R LD+L R + + R + R++ + Sbjct: 290 -----RLHRELSLLLQDYRQELDQLARSADAAWSRTTAARRRALGELRTRLEMRHPRAQL 344 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +R + E + + ++ E ++L R Sbjct: 345 VAHRGVLSELENRMHVAEQRRRERARREL-------------------------EQLSER 379 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ ++ L++ + L+RGY +T LA + Sbjct: 380 VHTAGRQRLDGAGRDFALLVARLRAMSPLQVLERGYALAVGPAG-VVTDAAQLAPGDALQ 438 Query: 487 INFFDGQANAIVINKAPPKE 506 + G+ + V + PP Sbjct: 439 VRLARGELDCRVESVHPPGA 458 >gi|197121564|ref|YP_002133515.1| exodeoxyribonuclease VII large subunit [Anaeromyxobacter sp. K] gi|196171413|gb|ACG72386.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter sp. K] Length = 542 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 146/515 (28%), Positives = 231/515 (44%), Gaps = 58/515 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V EL+ LK +E V V GE++ R +SGH YFSLKD+ + I A++W Sbjct: 76 PYTVRELTRALKSAIEPRFRDVWVAGEVANLR-RQASGHVYFSLKDDDAVIGAVMWASQA 134 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P EG+E L G + +P KYQ++++ L P G+G L++ K++L EGL Sbjct: 135 RRLAFAPGEGLEVLARGFVEIYPPHGKYQLVVQELEPRGAGAQALQLQQLKERLQAEGLL 194 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+PF+P + V TSPTGA +RD+L+ + RFP V+I P +VQG+ + + Sbjct: 195 DPARKRPLPFLPARVGVATSPTGAALRDLLRVLHARFPGAPVLIAPCRVQGEGAAATVIS 254 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ L D++++ RGGGS EDLW FNDE + RAIA +P++SA+GHE D Sbjct: 255 AVRALCRA-------GVDVVVVTRGGGSQEDLWAFNDERLARAIAACPVPVVSAVGHEVD 307 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD AD+RA TPT AA++ VPV++ L + L ARL ++ + TL +L Sbjct: 308 VTVADLVADVRAATPTHAAQLVVPVRDELVERVAALRARLARAQAGAVEGRRRTLRALRA 367 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + LS R+RLD L E + R+ + + R+ ++ R Sbjct: 368 ELADPKHLLSRERHRLDDLAHRGEAAVRGPRRRERAALDALRGRLTRLEPRARVRALRAR 427 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + R + R+E Sbjct: 428 MESATRRLGGWQAATFRREAM--------------------------------RLER--- 452 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 L+ L RG+ + + + + + + + +G Sbjct: 453 ------------LGARLEPANVAKLLARGFALALR-DGHLLLRSADAQVGDAVRVALAEG 499 Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527 +A + E P + E+ G GE Sbjct: 500 WLDARITG-RDAGEDPLPGRSGPAGEPERPGHGGE 533 >gi|254521090|ref|ZP_05133145.1| exodeoxyribonuclease VII, large subunit [Stenotrophomonas sp. SKA14] gi|219718681|gb|EED37206.1| exodeoxyribonuclease VII, large subunit [Stenotrophomonas sp. SKA14] Length = 443 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 130/495 (26%), Positives = 219/495 (44%), Gaps = 58/495 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + ++ S+L+ + ++E + + V E+ G +SGH YF+LKD +++ A + Sbjct: 3 PRNDDIFTPSQLNTLARDLLEGSFPAIWVEAEL-GSVARPASGHLYFTLKDARAQLRAAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F+P EG+ LV GK+T + +YQ++++ + +G G L A E+ K +L Sbjct: 62 FRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHMEEAGEGALRRAFEELKARLE 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF K P+P + +AVITSPTGA +RD+L + RFP L V + P VQG Sbjct: 122 AEGLFDPARKRPMPAHVQRLAVITSPTGAAVRDVLSVLGRRFPLLEVDLLPTLVQGSSAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I + R D+I+L RGGGS+EDLW FNDE + RAIA P++SA+ Sbjct: 182 AQITRLLQA------ADASGRYDVILLTRGGGSLEDLWAFNDEALARAIAAGHTPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD++L+D+AADLRAPTP+ AAE+ VP + L L AR+ + ++ + Sbjct: 236 GHETDFSLSDFAADLRAPTPSVAAELLVPDQRELALRLRRTAARMVQLQRHAMQQAMQRA 295 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + L R R L R L R+ H ++ Sbjct: 296 DRALLRLNAQSPQARLDLLRRRQLDLGRRLHAAFNQQHERRAARLRHAAAVLRGHHPQRQ 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + + ++ Sbjct: 356 LDAMQRRLAALRGRPQSAMQ---------------------------------------- 375 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTR 484 ++ + R L++ + T+ RGY+ + + + + Sbjct: 376 -------RLLERDALRLRGLARSLEAVSPLATVARGYSILTRSDDGALVRHVDQVQPGDA 428 Query: 485 ILINFFDGQANAIVI 499 + DG + V Sbjct: 429 LQARVGDGVIDVQVK 443 >gi|257875396|ref|ZP_05655049.1| exonuclease VII [Enterococcus casseliflavus EC20] gi|257809562|gb|EEV38382.1| exonuclease VII [Enterococcus casseliflavus EC20] Length = 450 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 146/498 (29%), Positives = 243/498 (48%), Gaps = 62/498 (12%) Query: 10 LDHPEYSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ ++K V+ L V + GEIS +R + H YFSLKD+ ++I + Sbjct: 1 MAQEYLTVTALTKYIKRKFDVDPYLERVYLTGEISNFRRRPN--HQYFSLKDDGAKISTV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG +K+ F PEEG++ + +G+IT + S YQ++I+ + P G G L A E+ K+KL Sbjct: 59 MFKGAFDKLRFQPEEGLKVMAVGRITLYEASGNYQMVIDHMEPDGVGALYQAYEQLKQKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLFS ++ +P PK IAV+TSP+GAVIRDI+ R+P+ +++++P VQG++ Sbjct: 119 AAEGLFSAPKQS-LPKYPKRIAVLTSPSGAVIRDIITTTQRRYPIAQIVLYPTVVQGNKA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++ I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ PIIS+ Sbjct: 178 ADDVVKNIQRV------EADGTFDTMIIGRGGGSIEDLWPFNEERVARAIFDAKTPIISS 231 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL + I+YK Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEEILRIEERQARLEQAFMHQIQYKQER 291 Query: 307 LNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + ++ L+ +++ K R +I+R+ Sbjct: 292 YQRVIGSYVFRQPERLYEAQSIKLDQLQQRMQQGLQTLLYDKDRQAQQLISRLAQQQPKA 351 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q + Q + Q + + +K + + Sbjct: 352 RLQASNQEVSYLSQRLTKAMKDIYAAKENQFANAVQS----------------------- 388 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + RGY+ N I + + + Sbjct: 389 ------------------------LDLLSPLKIMGRGYSYTT-KNEQVIKSIDAIEPEDQ 423 Query: 485 ILINFFDGQANAIVINKA 502 + I++ DGQA VI+ Sbjct: 424 LAIHYQDGQALVEVISTE 441 >gi|255020993|ref|ZP_05293047.1| Exodeoxyribonuclease VII large subunit [Acidithiobacillus caldus ATCC 51756] gi|254969548|gb|EET27056.1| Exodeoxyribonuclease VII large subunit [Acidithiobacillus caldus ATCC 51756] Length = 446 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 137/499 (27%), Positives = 245/499 (49%), Gaps = 55/499 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 N + P SVSEL+ ++ I+E N + V GEIS + +SGH YFSLKD+ +++ Sbjct: 2 TNEAEIPALSVSELNRSVREILEGNFPLLRVTGEISNFV-QPASGHWYFSLKDDRAQVRC 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ P++G++ V+ + T + G +Q++IESL G+G L K+K Sbjct: 61 AMFRARNALCRLRPKDGLQVQVLAQPTLYEGRGDFQLLIESLTAVGAGDLQARFAALKEK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L EGLF+ + K P+P P+ +AVI+S +GA + DI ++ R+P+ ++++PV VQGD+ Sbjct: 121 LAAEGLFAPELKRPLPAWPRRVAVISSASGAALHDIRVTLARRWPVLEIVVYPVLVQGDQ 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +I A+ + + D++ILARGGGS EDLW FN+E + RAI +P+++ Sbjct: 181 AAAQICAALQRAGQRAQE------DLVILARGGGSAEDLWCFNEESVARAIRACPLPVVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D+T+AD+AADLRAPTPT AAE A P ++ + L+ +L ++R ++ + Sbjct: 235 GIGHEIDFTIADFAADLRAPTPTAAAEAASPDGIEIRDRIEKLKQQLTRAMVRRLREETQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L+ L L + Q L ++RL L + L + ++ ++ R +S H Sbjct: 295 RLDHLRLRLRDPRQALDHGQHRLAGLQQRLRQAVRRRLWEARERLANLDRRRRSHHPQHL 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + +++L +++ +E+ + L + ++ Sbjct: 355 LLQGERNLLNQRKALERAMGLRLEHQQQRLQQLRNA------------------------ 390 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 LQ + L+RG++ ++D + + R++ + Sbjct: 391 -----------------------LQLLNPEAVLQRGFSILRDGDGQIVRDSRSVGLGAEL 427 Query: 486 LINFFDGQANAIVINKAPP 504 G+ V ++P Sbjct: 428 DATLARGRLRLQVRGRSPE 446 >gi|194366532|ref|YP_002029142.1| exodeoxyribonuclease VII large subunit [Stenotrophomonas maltophilia R551-3] gi|226697612|sp|B4SQC8|EX7L_STRM5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|194349336|gb|ACF52459.1| exodeoxyribonuclease VII, large subunit [Stenotrophomonas maltophilia R551-3] Length = 443 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 133/495 (26%), Positives = 222/495 (44%), Gaps = 58/495 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++ + S+L+ + ++E + + V E+ G SSGH YF+LKD +++ A + Sbjct: 3 PRNNDILTPSQLNTLARDLLEGSFPAIWVEAEL-GSVARPSSGHLYFTLKDARAQLRAAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F+P EG+ LV GK+T + +YQ++++ + +G G L A E+ K +L Sbjct: 62 FRMKAQYLKFVPREGMRVLVRGKVTLYDARGEYQMVLDHMEEAGEGALRRAFEELKARLE 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF K P+P + +AVITSPTGA +RD+L + RFP L V + P VQG+ Sbjct: 122 AEGLFDQARKRPMPAHVQRLAVITSPTGAAVRDVLSVLGRRFPLLEVDLLPTLVQGNSAA 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I + R D+I+L RGGGS+EDLW FNDE + RAIA S P++SA+ Sbjct: 182 AQITRLLQA------ADASGRYDVILLTRGGGSLEDLWAFNDEALARAIAASRTPVVSAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD++L+D+AADLRAPTP+ AAE+ VP + L L AR+ + ++ + Sbjct: 236 GHETDFSLSDFAADLRAPTPSVAAELLVPDQRELALRLRRNAARMVQLQRHTMQQAMQRA 295 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L + L R R L R L R+ H ++ Sbjct: 296 DRALLRLNAQSPQARLDLLRRRQLDLGRRLHAAFNQQQERRAARLRHAAAILRGHHPQRQ 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + + ++ Sbjct: 356 LDAMQRRLAALRGRPQIAMQ---------------------------------------- 375 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTR 484 ++ + R L++ + T+ RGY+ + + + Q + Sbjct: 376 -------RLLERDALRLRGLARSLEAVSPLATVARGYSILTRSDDGTLVRQVDQVQPGDA 428 Query: 485 ILINFFDGQANAIVI 499 + DG + V Sbjct: 429 LQARVGDGVIDVQVK 443 >gi|46446255|ref|YP_007620.1| putative exodeoxyribonuclease VII, large chain [Candidatus Protochlamydia amoebophila UWE25] gi|46399896|emb|CAF23345.1| putative exodeoxyribonuclease VII, large chain [Candidatus Protochlamydia amoebophila UWE25] Length = 482 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 169/489 (34%), Positives = 249/489 (50%), Gaps = 16/489 (3%) Query: 21 SYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLP 80 + +K +ES + ++GEIS ++ SSGH YFSLKD ++I A+++K + ++ P Sbjct: 2 TQAIKLNLESMFPFIYLQGEISNFKEQ-SSGHFYFSLKDATAQISAVMFKAEASLLKTPP 60 Query: 81 EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNP 140 + G ++ G+I+ +P YQ+II L G G LL LE+ K KL ++G F HK P Sbjct: 61 KGGDHVMIKGEISVYPPKGNYQLIIRELSYVGIGELLQKLEQLKIKLHQKGWFKAIHKKP 120 Query: 141 IPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNT 199 IP PK I VITSPTGAVI+DILQ ++ RF +I+ PVKVQG+ KEIA AI Q N Sbjct: 121 IPRFPKKIGVITSPTGAVIQDILQILTRRFSGFHLILNPVKVQGEGAAKEIARAIEQFNR 180 Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259 + D++I+ RGGGS+EDLW FN+E++ AI NS IPIISA+GHETD +ADY Sbjct: 181 YQ------LVDVLIVGRGGGSLEDLWPFNEEIVAEAIYNSQIPIISAVGHETDHCIADYV 234 Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNS 317 AD+RAPTP+ AAE+ + K L L R+ I LI+ L K L + Sbjct: 235 ADIRAPTPSAAAEIVISEKNQQLEHLKTLRRRIQQAIQNLIQSGHYRLKGFSKHLFITHP 294 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 +LD L +L + L+ II K + + + I R+H+ + Sbjct: 295 HVITEWRMQKLDDLKEDLSNQLKQIITFKKHQLESFARQTQLLKPSNQIIHLRKHLRDWN 354 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EFILSHKI 435 + ++ + KK+ I + L++Q I K RI ++ +I Sbjct: 355 GIFSRKMQD---LLLQNKKKIEQIEYRLKQQWTYLIGQKKYLFKGKDYRIKNNQLIRDRI 411 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINFFDGQA 494 S + T IL++ KN LK+GY+ + I L + + DG+A Sbjct: 412 LSSKQKILHITNILKAVDPKNLLKQGYSILFAEKEVFVINSICKLKKGQKAKLLLSDGEA 471 Query: 495 NAIVINKAP 503 + P Sbjct: 472 LITINEVNP 480 >gi|323440421|gb|EGA98133.1| exodeoxyribonuclease VII large subunit [Staphylococcus aureus O11] Length = 445 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 231/492 (46%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG+ Sbjct: 5 LSVSALTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGS 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ F YQI + + G G L LE KKKL EEG Sbjct: 64 ASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQLDGIGNLYQKLEALKKKLTEEGC 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K IP PK IAV+T+ TGA IRDI I+ RFPL I VQG++ +I Sbjct: 124 FDKANKKSIPKFPKKIAVLTASTGAAIRDIHSTINSRFPLAEQIQISTLVQGEKAKDDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIEYADSL-------GVDAIIVGRGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D AAD+RA TPT AA +A P + L + + L I + ++ + + L Sbjct: 237 DFTLSDVAADIRAATPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + L+ ++ ++ + R L+ ++ + Sbjct: 297 SYYKFKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALLSSVNQE 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+ L+ + ++ + Sbjct: 357 QQNNLQLTNQLVKL-------------------------------------------LNS 373 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + V L + + NT+ RGY + + + IT ++L ++ + Sbjct: 374 KILSYKNDLKNKVEN----LNNLSPTNTMLRGYAIV-NKKDEVITSTKDLTENDQLTLTM 428 Query: 490 FDGQANAIVINK 501 DG +A V Sbjct: 429 KDGLVDAKVTKV 440 >gi|256851328|ref|ZP_05556717.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 27-2-CHN] gi|260660752|ref|ZP_05861667.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 115-3-CHN] gi|282933227|ref|ZP_06338614.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 208-1] gi|297206198|ref|ZP_06923593.1| exodeoxyribonuclease VII large subunit [Lactobacillus jensenii JV-V16] gi|256616390|gb|EEU21578.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 27-2-CHN] gi|260548474|gb|EEX24449.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 115-3-CHN] gi|281302731|gb|EFA94946.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 208-1] gi|297149324|gb|EFH29622.1| exodeoxyribonuclease VII large subunit [Lactobacillus jensenii JV-V16] Length = 453 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 137/501 (27%), Positives = 239/501 (47%), Gaps = 58/501 (11%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 SVS+L+Y++ +++ L V ++GE+S +R +S H YFSLKD ++I ++++ Sbjct: 6 KYLSVSDLNYYINLKFKNDPYLHQVFLKGELSNFRYRRNS-HQYFSLKDEKAKISVVMFR 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 K++F PEEG++ V G I +P YQ +++ P+G G L L + + KL +E Sbjct: 65 SAFEKLKFKPEEGMKVYVSGYIGVYPPQGTYQFYAQTMEPAGLGELYERLRQLQDKLSKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ +HK +P P IAV+TS +GAVI DI+ + RFP + +FP +VQGD + Sbjct: 125 GLFAAEHKKKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTAAES 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + NA+ Q+ D++I+ RGGGS+EDLW FN+E++VR++ + +P+IS++GH Sbjct: 185 LVNAMNQIKERASE-----YDVMIIGRGGGSLEDLWPFNEEIVVRSVYSMPMPVISSVGH 239 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD TL D AD+RA TPT AAE A P + L L++RL + I+ + L Sbjct: 240 ETDTTLCDLVADVRAATPTAAAEYATPNLSDELAGLHQLQSRLLTSMQACIRERKQALLR 299 Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + +D+L L +++I+ ++ ++ + ++ Sbjct: 300 IQNSPIMREPMRLYDQQVQSVDQLTGRLMQIIKVILQNNRQNLKISEQKLLAQSPKRLLE 359 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + +Q Q + +K L+ + ++ Sbjct: 360 RTKQSNDYLNQRLLNAIKTLLKDKRIAFQQ------------------------------ 389 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + L+ + L RGY D I +N+A + + Sbjct: 390 -----------------QVQTLEDISPLKVLSRGYVYTTDQAGKTIMSTKNIAKDEVLNL 432 Query: 488 NFFDGQANAIVINKAPPKEQP 508 +F DG+A A ++ ++ Sbjct: 433 HFADGKAKAKILEVEDNEDAK 453 >gi|221199220|ref|ZP_03572264.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD2M] gi|221180505|gb|EEE12908.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD2M] Length = 460 Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 232/490 (47%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + + GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF+P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG + + A+ Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAERLVAAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 QTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+A P + L L E L ++R ++ + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELASPQRALLLRELAERERALARALVRGLEQRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R + +L L + + R + Sbjct: 314 VSPAERLQRQRAHVGQLAVRLATAAARPV---------------------RDARARFALA 352 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + + H R++ +++A+ R Sbjct: 353 QLRWQRARPDPAHARHVLAGLSQRLAVALQRRH--------------------------- 385 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 + V+ L+ + + TL+RGY ++ D + L + R+ ++ +G Sbjct: 386 -ERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|296106405|ref|YP_003618105.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila 2300/99 Alcoy] gi|295648306|gb|ADG24153.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila 2300/99 Alcoy] Length = 443 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 156/496 (31%), Positives = 237/496 (47%), Gaps = 57/496 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S P +VS+L+ +K +E+ + V V GEIS SSGH YF+LKD+ ++I Sbjct: 2 SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60 Query: 69 WKGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +K + + +G + + GK++ + +YQ+I+E ++ +G G L E+ K KL Sbjct: 61 FKNRHSSSLLRNFNDGQQIVASGKLSLYEARGEYQLIVEEIVEAGMGVLYQRFEELKIKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+ + K +P IP+ I +ITSPTGA I+DIL ++ RFP+ RVII+P +VQG Sbjct: 121 ASEGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLARRFPIARVIIYPSEVQGQTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P+++ NA+ N R ++ILARGGGSIEDLW FNDE + R IA S IP++S Sbjct: 181 PQQLVNALKLANA------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHETD+T+AD+ AD RA TPT AA P L + L RL++ IIRLIK Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLIKGLQLK 294 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LN L+ + + Q +S LD L R+L + I N + +++++ I Sbjct: 295 LNHLIDKIASPRQAISTYWQTLDYLERQLISAMTQFINLNINKVNIFLTQLQANNPKIQI 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + + + I L I+ + + Sbjct: 355 ERTKIQL------------------------------------QQLIMQLTQEIRIKVNQ 378 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ LS + + H + TL RGY + N + + I Sbjct: 379 LKNQLSTILSTLHA-----------VSPLATLDRGYAIV-SKNQRILFAAQQAQIGDTID 426 Query: 487 INFFDGQANAIVINKA 502 I G V Sbjct: 427 IRLAKGSLACEVTQIK 442 >gi|325957125|ref|YP_004292537.1| exodeoxyribonuclease VII large subunit [Lactobacillus acidophilus 30SC] gi|325333690|gb|ADZ07598.1| exodeoxyribonuclease VII large subunit [Lactobacillus acidophilus 30SC] Length = 452 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 139/498 (27%), Positives = 242/498 (48%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V G ++ + YQ E++ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ HK +P P IAV+TS +GAVI DI+ + RFP + ++P +VQGD Sbjct: 121 AKEGLFNQDHKRRLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS+ Sbjct: 181 ADSLVRAMHQI-----AEQGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQIYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L +RL + + +I+ K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIREKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + +DRL L ++++ +I + + + R+ S Sbjct: 296 LNRVKNSVIMREPTRLYDQQIETVDRLKDSLHNSMQNMIDHSKQSYLLLKQRLFSASPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q+ +Q + + ++ + Sbjct: 356 QMQQMQQQERFLAKRLADNMQHY------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K S S T + L ++ TL+RG+ D N ++ + + Sbjct: 379 ----------LKDKRNSFSKTVQQLDDYSPLKTLERGFVYTTDANGKTVSSVKQVKKLES 428 Query: 485 ILINFFDGQANAIVINKA 502 + ++F DGQ A V Sbjct: 429 LNLHFKDGQVEATVTKIE 446 >gi|330444324|ref|YP_004377310.1| exonuclease VII large subunit [Chlamydophila pecorum E58] gi|328807434|gb|AEB41607.1| exonuclease VII large subunit [Chlamydophila pecorum E58] Length = 554 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 153/560 (27%), Positives = 252/560 (45%), Gaps = 70/560 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + P +V+ L+ ++K ++ES+ H+ V+GE+S SGH YF +KD S ++ + Sbjct: 1 MSVPPQAVTSLTENIKTLLESHFCHIVVKGELSNVSLQP-SGHLYFGIKDEKSFLNGAFF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 P++G ++ GK+T + YQI+ +L+ +G G LL E+ KK+L Sbjct: 60 HFKSKFFGRRPKDGDAVILHGKLTVYAPRGLYQIVAHALVYAGEGDLLQKFEELKKRLTT 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPK 188 EG F+ + K +P PK I VITSPTGAV++DIL+ +S R + +V+I+PV VQG+ K Sbjct: 120 EGYFAMEKKKSLPKAPKCIGVITSPTGAVVQDILRVLSRRCYNYKVLIYPVTVQGESATK 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI A+ +N D++ILARGGGSIEDLW FN+E +V+AI S IPIISA+G Sbjct: 180 EICKALEVMNA------ENIADVLILARGGGSIEDLWSFNEEALVKAIHASKIPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL D AAD+RAPTP+ AAE+ P E L + L + + + K + L Sbjct: 234 HETDYTLCDLAADVRAPTPSAAAEIVCPSSEQQLQQLQGILNHLLSHSQQFFQGKKDQLL 293 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH---- 364 + L N + ++ +LD + + + + + H ++ D L Sbjct: 294 VWKRQL-NRTEFFRTAQQQLDFVRIAIHREMLGKLLHYQQRCEHFSRWLQGDLLNKLSFR 352 Query: 365 ----------------------------------NIQKNRQHILEKQQHIEQIVKQHLRY 390 + ++ Q ++ +Q ++ ++ + L Sbjct: 353 LQDVKKMLNHACTHKLSSLQNHYDLTKKKFSTLPQLHESAQRLISLKQQLDTLIFRRLYL 412 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH----------- 439 K ++L + ++ + L R+ + + Sbjct: 413 YSQAFAHKRSLLKHVETTLYQQLHTHRQTLDLLQKRLFSHAQVVLANNKATHAHVRDRLS 472 Query: 440 ----TSVSITT-------RILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILI 487 + + L KN LKRGY + D N I ++L +R+ + Sbjct: 473 ATMQQRLESAAVLYKNVCKHLLVLNPKNVLKRGYAMLFDFNEKIAILSVKSLQPSSRVRV 532 Query: 488 NFFDGQANAIVINKAPPKEQ 507 DG+A V + Sbjct: 533 QLHDGEAILAVTETKSFEPT 552 >gi|121601292|ref|YP_991915.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei SAVP1] gi|121230102|gb|ABM52620.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei SAVP1] Length = 510 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 130/490 (26%), Positives = 226/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 71 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 129 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 130 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 189 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 190 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 249 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 250 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 303 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 304 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 363 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + +L L + F+ + R + + + RQ + Sbjct: 364 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 421 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q ++ + + RI + Sbjct: 422 AFAQRLDATL-------------------------QRRIERDTARV-------------- 442 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 + L+ + + TL+RGY ++ D + +L + R+ ++ +G Sbjct: 443 --------AACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 494 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 495 ADVSLADVQP 504 >gi|242373823|ref|ZP_04819397.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis M23864:W1] gi|242348377|gb|EES39979.1| exodeoxyribonuclease VII large subunit [Staphylococcus epidermidis M23864:W1] Length = 445 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 150/492 (30%), Positives = 245/492 (49%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD S I A+++KG Sbjct: 5 LSVSTLTKYIKYKFDQDPHLQSVLLKGELSNFK-KHSSGHLYFNVKDKESVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EG Sbjct: 64 ASKLGFEPKEGDEVLLEARVSVYERRGNYQIYVNKMQLDGIGNLYQKLEELKKKLAKEGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F + K PIP PK IAV+T+ TGA IRDI I+ R+P + I VQG + ++I Sbjct: 124 FDNNIKKPIPKFPKKIAVLTASTGAAIRDIHSTINSRYPLVEQIQISTLVQGTQAKEDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +V+AI + PIISA+GHET Sbjct: 184 EKIQYADSL-------NVDTIIVGRGGGSIEDLWNFNEEEVVKAIYQCATPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + + L I + I+ + L+ L Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQYELMQQIKQYQFSLTRFIKQYIEQQKKQLSHLS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D L ++L+ I R+++H + L +I ++ Sbjct: 297 SYYKFKQPSLLYDQQIQKRDDLEKQLKQITLTNIERQHQHLKLLRQSFNLKILSQHINQD 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q+I + + + Q I +++++ Sbjct: 357 KQNISQLRSRMSQ------------------------------------KINNDLSKMKA 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L +KI++ L + + NT+ RGY + + ++ +T +++ I + Sbjct: 381 DLKNKIEN-----------LNNLSPTNTMLRGYAIV-NKDDKVVTSTHDISENDSISLTM 428 Query: 490 FDGQANAIVINK 501 DG +AIV Sbjct: 429 KDGNVDAIVKKV 440 >gi|328952414|ref|YP_004369748.1| Exodeoxyribonuclease 7 large subunit [Desulfobacca acetoxidans DSM 11109] gi|328452738|gb|AEB08567.1| Exodeoxyribonuclease 7 large subunit [Desulfobacca acetoxidans DSM 11109] Length = 460 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 232/500 (46%), Gaps = 56/500 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 YSV++L+ +K +E V V+GE+S R H SGH YF+LKD S++ +I++ Sbjct: 15 IYSVADLTRMIKDRLEQEFPLVWVQGEVSNLRSPH-SGHCYFTLKDEASQLRVVIFRSYY 73 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P + ++ + G++T + +YQ++ + P G G L A E+ K +L EGLF Sbjct: 74 QAMRFKPVDSLKIVCRGQLTVYEPRGEYQLLADYTEPLGMGALAQAFEQLKARLDAEGLF 133 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 ++K P+P++P +AV+TSP+GA IRD LQ + RFP ++V+++PV+VQG +EI Sbjct: 134 DPRYKKPLPYLPHRLAVVTSPSGAAIRDFLQILHRRFPNIQVLVYPVRVQGAGAAEEIVG 193 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ LNT+ P D+IIL RGGGS+EDLW FN+E + RAI S+IP+ISA+GHE D Sbjct: 194 ALRTLNTM------PDLDVIILTRGGGSLEDLWAFNEEKVARAIFQSTIPVISAVGHEID 247 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ AD RAPTP+ AAE+ V E LQ L L L + L++ L Sbjct: 248 FTIADFVADRRAPTPSAAAELVVRPLEELQLELQRLSLSLQRRFLNLLQQGRERLRLSGH 307 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + ++ R RLD +L+ + R+ + + R Sbjct: 308 RLKDPRRRVADLRLRLDERAEQLQRLWQTKRRDAAAKLRLAAARLSLLSVRRRSEGQR-- 365 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 +L +Q R+ + R+ Sbjct: 366 -------------------------------LLLQQDNRRLQQVLRRRLSDHRRL----- 389 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRILINFFD 491 + T L+ L RGY + + + + A +L++ Sbjct: 390 ---------LEHLTDRLRPLNPAAILARGYAVALTLPDRAVLRTSQQTAVGAPVLVHLHH 440 Query: 492 GQANAIVINKAPPKEQPTKK 511 G V + K Sbjct: 441 GALRCQVTSITDETLPLPTK 460 >gi|160938276|ref|ZP_02085631.1| hypothetical protein CLOBOL_03172 [Clostridium bolteae ATCC BAA-613] gi|158438649|gb|EDP16406.1| hypothetical protein CLOBOL_03172 [Clostridium bolteae ATCC BAA-613] Length = 428 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 126/495 (25%), Positives = 223/495 (45%), Gaps = 79/495 (15%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+VS+++ +++++ + + + +RGE+S + H+SGH YF+LKD ++I A+++ G Sbjct: 4 VYTVSQVTAYIRNMFTQDFALNRISIRGEVSNCK-YHTSGHIYFTLKDGGAQIAAVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++F EG E V G + + +YQ+ + + G G L EK + +L E G Sbjct: 63 QRKGLDFELREGQEVTVSGTVDVYERDGRYQLYAKEITREGKGDLFRQFEKLRNELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F +K PIP + + ++T+ TGA IRDI+ + R P +++I++P VQG++ I Sbjct: 123 MFDSCYKQPIPKYARKVGIVTAGTGAAIRDIMNISARRNPYVQLILYPALVQGEQAKYSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A I L+ + D++I+ RGGGSIEDLW FN+EM+ RAI N + P+ISA+GHE Sbjct: 183 AKGIETLDRM-------GLDVLIVGRGGGSIEDLWAFNEEMVARAIFNCTTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV + L Sbjct: 236 TDVTIADYVADLRAPTPSAAAELAVFDYGQFVEQVNLYRQVL------------------ 277 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 E ++E + + + + R+K + R Sbjct: 278 -------------------------ERSMERRLEKLHFRLDQCGMRLKLLSPEKQLNDRR 312 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + + +E+++ + + ++ R+E Sbjct: 313 QRLADMESRLERMM-------------------------EENLGLSRRKLEDRRRRLEAR 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ + +++ + L + L G+ + D T I ++ Sbjct: 348 MALGLTEGKHRLALLSGRLDGLSPLKKLGGGFGFVTDARGRAFTSITQAEPGDIIRVSVK 407 Query: 491 DGQANAIVINKAPPK 505 DG+ +A V+ K Sbjct: 408 DGRVDARVVETESMK 422 >gi|227530528|ref|ZP_03960577.1| exodeoxyribonuclease VII large subunit [Lactobacillus vaginalis ATCC 49540] gi|227349534|gb|EEJ39825.1| exodeoxyribonuclease VII large subunit [Lactobacillus vaginalis ATCC 49540] Length = 445 Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats. Identities = 148/497 (29%), Positives = 238/497 (47%), Gaps = 63/497 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +VSEL+ +LK + + L V + GE+S +R H YFS+KD ++ IDA+++ Sbjct: 4 SQYLTVSELTSYLKQKFDRDPYLKTVYLTGELSNFRLRQR--HQYFSIKDENAVIDAVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++ F PE G++ LV+G I + S +YQI ++ + P G G L E+ KKKL Sbjct: 62 ERQFRQVNFRPETGMKILVVGHIGLYEKSGRYQIYVDRMEPDGLGALYLQFEQLKKKLGA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF Q PIP PK IAV+TS GAVIRDI + R+P+ +V++FP VQGD+ Sbjct: 122 EGLFD-QIPRPIPQFPKRIAVVTSLDGAVIRDINTTVRRRYPIAQVVLFPTVVQGDKAAT 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA I + N + D +I+ RGGGS+EDLW FN+E++ RAIA+S IP+IS++G Sbjct: 181 DIARQINRANQI------GNFDTMIIGRGGGSLEDLWPFNEEIVARAIADSHIPVISSVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL---IKYKIN 305 HETD T+AD AD RA TPT AAE+A P + I + N ++ K Sbjct: 235 HETDTTIADLVADQRAATPTAAAELATPNRLADVLMTIQDDQVRLNNTMKKLIDFDRKQL 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + +LD+L + LE+N+ ++ + + R++ + H Sbjct: 295 QKQLQSYIFQQPSRLYENYAQKLDQLTQTLENNVSNLVKDRLNRVQQLQGRLQINSPQHT 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I++ ++ + + Q + K + Sbjct: 355 IERAQETVTQLQNRLLSSAKNSQQQRHQ-------------------------------- 382 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 V+ + L S + + RGY+ + N+ + + L + ++ Sbjct: 383 ---------------QVTSLIQQLDSLSPLKIMGRGYSYVTY-RNSVVNTVKELKSGQQV 426 Query: 486 LINFFDGQANAIVINKA 502 ++F DG+A A +I Sbjct: 427 SLHFNDGKATAKIIGTK 443 >gi|325928072|ref|ZP_08189285.1| Exodeoxyribonuclease VII large subunit [Xanthomonas perforans 91-118] gi|325541570|gb|EGD13099.1| Exodeoxyribonuclease VII large subunit [Xanthomonas perforans 91-118] Length = 445 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 127/496 (25%), Positives = 224/496 (45%), Gaps = 60/496 (12%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + + S+L+ + ++E + V V E+S +SGH YF+LKD ++I ++K Sbjct: 5 NDQILTPSQLNSLARDLLEGSFPLVWVEAELSSVT-RPASGHLYFTLKDARAQIRCAMFK 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++F P EG+ L G++T + YQ++++ + +G G L A ++ + +L E Sbjct: 64 PKSTWLKFQPREGLRVLARGRVTLYEARGDYQLVLDHMEEAGEGALRRAFDELRARLAAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K +P + +AVITSP+GA +RD+L ++ RFP L V + P VQGD + Sbjct: 124 GLFDAERKQALPAHVQRLAVITSPSGAAVRDVLSVLARRFPLLEVDLLPSLVQGDSAAAQ 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I + L+ R D+I++ RGGGS+EDLW FNDE + RAIA + P++SA+GH Sbjct: 184 I------TSLLQRADASGRYDVILITRGGGSLEDLWAFNDERLARAIAAAQTPVVSAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D+ AD+RAPTP+ AAE+ VP + L + + +AR+ + + + + Sbjct: 238 ETDFSLSDFVADVRAPTPSVAAELLVPDQRELVARVRRAQARMTQLQQHALGNAMQRADR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + L R R+L + ++ R ++++ Sbjct: 298 LALRLRAQSPQARLQLLHRRQQDAGRQLRARMTQVLERLQARLQRGQAQLQAHNPQRQ-- 355 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + QQ + + Q + R+ Sbjct: 356 -----LAGLQQRLRALHPQ----------------------------------AAMQRRL 376 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRIL 486 + + R L++ + T+ RGY + +++ + + T R+ Sbjct: 377 QH--------DQLQLRSIARSLEAVSPLATVARGYAIVTRPADSSVVRSAAEVVTGERLR 428 Query: 487 INFFDGQANAIVINKA 502 DG V + Sbjct: 429 AQLADGSIQVRVESGE 444 >gi|325266885|ref|ZP_08133556.1| exodeoxyribonuclease VII large subunit [Kingella denitrificans ATCC 33394] gi|324981626|gb|EGC17267.1| exodeoxyribonuclease VII large subunit [Kingella denitrificans ATCC 33394] Length = 450 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 125/493 (25%), Positives = 233/493 (47%), Gaps = 57/493 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +VSEL+ ++++ L+ V GEIS +SGH YF+LKD+ +++ ++K Sbjct: 11 LTVSELNAAADDLLQTELAGYWVSGEISNLT-RAASGHYYFALKDDQAQVRCALFKFAAA 69 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ +EG V+GKI + ++QI + + G G L E+ K +L E+G F Sbjct: 70 RLAQPLKEGDHVEVLGKIGIYGARGEFQITVNEVRQMGLGRLFERYERLKARLQEQGFFD 129 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++ K +P P+ I ++TS A +RD++ + R P + VI++P VQG ++IA A Sbjct: 130 EERKRRLPAQPRAIGIVTSLAAAALRDVVSTLKRRAPHIPVIVYPTPVQGAGSEQQIAQA 189 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I +E D++I+ RGGGSIEDLW FN+E +V A+A ++P++S +GHETD+ Sbjct: 190 IQTAQQRQE------VDVLIVCRGGGSIEDLWAFNEEAVVYAVAACTLPVVSGVGHETDF 243 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TL D+ AD+RAPTPT AAE+ P L ++ L + + + L + Sbjct: 244 TLCDFVADVRAPTPTAAAELVSPNNAEHLRRLQHIGQVLQQYAWQHYRNAAQKTDWLAQR 303 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + + Q L+ L L + ++H R+ + + ++ +I + +Q + Sbjct: 304 IQHPRQKLAEQNKTLQYLAQSMQHYGRQRCERQQHRLQQLAYNLAANRP--DIAQQKQRL 361 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + Q + +K + L +I+ ++ + Sbjct: 362 SQVQAALSAAIK-----------------------------------QNLQDKIQRVMQY 386 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + +++ + + + L+RGY ++D + + Q L ++ + F +GQ Sbjct: 387 R------------QLMDATSPYSVLRRGYALVRDARGHVVRQAERLRLGQKVRVEFAEGQ 434 Query: 494 ANAIVINKAPPKE 506 A+ V+ + + Sbjct: 435 ADMQVLPQQAQDD 447 >gi|327183849|gb|AEA32296.1| exodeoxyribonuclease VII large subunit [Lactobacillus amylovorus GRL 1118] Length = 452 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 138/498 (27%), Positives = 242/498 (48%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V G ++ + YQ E++ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVTGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ HK +P P IAV+TS +GAVI DI+ + RFP + ++P +VQGD Sbjct: 121 AKEGLFNQDHKRRLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS+ Sbjct: 181 ADSLVRAMHQI-----AEQGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQIYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L +RL + + +I+ K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIREKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + +DRL L ++++ ++ + + + R+ S Sbjct: 296 LNRVQNSVIMREPTRLYDQQIETVDRLKDSLHNSMQNMVDHSKQSYLLLKQRLFSASPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +Q+ +Q + + ++ + Sbjct: 356 QMQQMQQQERFLAKRLADNMQHY------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K S S T + L ++ TL+RG+ D N ++ + + Sbjct: 379 ----------LKDKRNSFSKTVQQLDDYSPLKTLERGFVYTTDANGKTVSSVKQVKKLES 428 Query: 485 ILINFFDGQANAIVINKA 502 + ++F DGQ A V Sbjct: 429 LNLHFKDGQVEATVTKIE 446 >gi|89898503|ref|YP_515613.1| exodeoxyribonuclease VII large subunit [Chlamydophila felis Fe/C-56] gi|123483062|sp|Q253S0|EX7L_CHLFF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|89331875|dbj|BAE81468.1| exodeoxyribonuclease VII large subunit [Chlamydophila felis Fe/C-56] Length = 555 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 165/555 (29%), Positives = 261/555 (47%), Gaps = 69/555 (12%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + P +V+ L+ +K+++ESN HV V+GE+S SGH YF +KD+ S ++ Sbjct: 2 TTSSPPQAVTTLTESIKNLLESNFCHVVVKGELSNVSLQP-SGHLYFGIKDSRSFLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQI+ +L+ +G G LL E+ KK+L Sbjct: 61 FHFKSKYFDRRPKDGDSVIIHGKLTVYAPRGQYQIVAHALVYAGEGDLLQKFEETKKRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187 EG F+ + K +P IP+ I VITSPTGAVI+DIL+ +S R + +++I+PV VQG Sbjct: 121 AEGYFALEKKQTLPNIPQSIGVITSPTGAVIQDILRVLSRRCYQYKILIYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 KEI+ AI ++N D++ILARGGGSIEDLW FN+E++V+AI SSIPIISAI Sbjct: 181 KEISRAIEEMNK------ENLADVLILARGGGSIEDLWAFNEEIVVKAIDASSIPIISAI 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+AAD+RAPTP+ AAE+ E + LN +L+ KI + Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAAEIVCQSSEQQIQVFKSYLRYLNAHSQQLLSGKIKQI 294 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI---- 363 + L + D + LD L +E +++ + + + + ++SD L Sbjct: 295 QQWKRYLDHVD-FFRSAHQSLDYLCLSVERSIQTKLSQYKQRYMQYARWLQSDVLQRMTY 353 Query: 364 ---------------------------------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 HN Q+ Q + +Q + + + Q L Y Sbjct: 354 RLHDLWKMIVQAFHNRLTAAKHLCMQKKKNLTFHNTQQFIQKLDLWKQQLHRALTQRLGY 413 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--------------------- 429 + +L + + + L R+ Sbjct: 414 CSQSLTHQQTLLKHFTIKLNQQFTKGKHTLNLLQKRLTRTFANTVDEHRENYVRSRENLI 473 Query: 430 -ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487 L H ++ ++ L KN KRGY + D N N I ++L + + + Sbjct: 474 FSLHHLVERNREKYYTLSKQLTLLNPKNVFKRGYAMLFDFNENFAIISAKSLHKHSCVRV 533 Query: 488 NFFDGQANAIVINKA 502 DG+A V + Sbjct: 534 RLQDGEATLTVTDIQ 548 >gi|220904225|ref|YP_002479537.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868524|gb|ACL48859.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 496 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 126/523 (24%), Positives = 210/523 (40%), Gaps = 49/523 (9%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + +V EL+ L+ +E V VRGE++ + SGH YFSLKD +++ + + Sbjct: 1 MQEAILTVRELTEQLRKSLEGRFPFVWVRGEVTNF-SRPGSGHVYFSLKDQDAQLQCVWF 59 Query: 70 KGTLNKIE--FLP-----------------EEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 + + + F P G++ L G+I+ + +YQ+ +E + P Sbjct: 60 RHMQRQADQGFDPLTGEVFDEPRPSPLELLRNGLDVLCAGRISVYAPRGQYQLAVELVQP 119 Query: 111 SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170 +G G L A E+ K+KL G F K P+P P+ +A++TSPTGA I D L+ R Sbjct: 120 AGEGLLAQAFEESKRKLAALGYFDHGRKRPLPRDPQRVALVTSPTGAAIHDFLELARDRG 179 Query: 171 -PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + +FP VQG E I A+ + N+ + P +I+L RGGGS+EDLW FN+ Sbjct: 180 SGSCIRLFPSLVQGAEAAPAIVRALAEANS--QAGQNDGPQVIVLVRGGGSLEDLWAFNE 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 E + +A+ S +P+++ IGHE D TLAD AD+RA TP+ AA++ P + L + Sbjct: 238 ESVAKAVFESRLPVLAGIGHEVDMTLADMTADMRAATPSHAAQLLWPPRLELHQRVDEAR 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 A L + R ++ L KAL R + Sbjct: 298 AALRRAMERRLESAGQRLREYEKALAWFSP------------------------QRHHER 333 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + + + + + ++ LH Sbjct: 334 LYERLAVLDAALARAARHWLESREAQTVRLECALRGSFGLEKLDIFDARLKHLHARLHAA 393 Query: 410 KNRIFYLHTH-IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 R+ + R++ + + S+ + L + L RGY + Sbjct: 394 LPRLTDERQRALNYAALRLQSAARNHVAQHERSLDVLGAALDAGDPLMPLSRGYALV-SA 452 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511 + + T I + DG A+V + KK Sbjct: 453 GGSLVRSVETAPPGTEIQVRLADGSLAAVVGSVNHAGRGKRKK 495 >gi|220916327|ref|YP_002491631.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|219954181|gb|ACL64565.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 542 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 145/515 (28%), Positives = 232/515 (45%), Gaps = 58/515 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V EL+ LK +E V V GE++ R +SGH YFSLKD+ + I A++W Sbjct: 76 PYTVRELTRALKSAIEPRFRDVWVAGEVANLR-RQASGHVYFSLKDDDAVIGAVMWASQA 134 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P EG+E L G + +P KYQ++++ L P G+G L++ K++L EGL Sbjct: 135 RRLAFAPGEGLEVLARGFVEIYPPHGKYQLVVQELEPRGAGAQALQLQQLKERLQAEGLL 194 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+PF+P + V TSPTGA +RD+L+ + RFP V+I P +VQG+ + + Sbjct: 195 DPARKRPLPFLPARVGVATSPTGAALRDLLRVLHARFPGAPVLIAPCRVQGEGAAATVIS 254 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ L D++++ RGGGS EDLW FNDE + RAIA +P++SA+GHE D Sbjct: 255 AVRALCRA-------GVDVVVVTRGGGSQEDLWAFNDERLARAIAACPVPVVSAVGHEVD 307 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD AD+RA TPT AA++ VPV++ L + L ARL ++ + TL +L Sbjct: 308 VTVADLVADVRAATPTHAAQLVVPVRDELVERVAALRARLARAQAGAVEGRRRTLRALRA 367 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + LS R+RLD L E + R+ + + R+ ++ R Sbjct: 368 ELADPKHLLSRERHRLDDLAHRAEAAVRGPRRRERAALDALRGRLTRLEPRARVRALRAR 427 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + R + R+E Sbjct: 428 MESATRRLGGWQAATFRREAM--------------------------------RLER--- 452 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 L+ L RG+ + + + + + + + +G Sbjct: 453 ------------LGARLEPANVAKLLARGFALALR-DGHLLLRSADAQVGDGVRVALAEG 499 Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527 +A + + + P + E+ G GE Sbjct: 500 WLDARITGRDAGDD-PLPGRSGPAGEPERPGHGGE 533 >gi|227550444|ref|ZP_03980493.1| Exodeoxyribonuclease VII [Enterococcus faecium TX1330] gi|257897153|ref|ZP_05676806.1| exonuclease VII [Enterococcus faecium Com12] gi|293377378|ref|ZP_06623582.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium PC4.1] gi|227180345|gb|EEI61317.1| Exodeoxyribonuclease VII [Enterococcus faecium TX1330] gi|257833718|gb|EEV60139.1| exonuclease VII [Enterococcus faecium Com12] gi|292644070|gb|EFF62176.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium PC4.1] Length = 453 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 145/507 (28%), Positives = 246/507 (48%), Gaps = 61/507 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IA++TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL + I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVHQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ I+ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPIY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + I++ DG V +++ K Sbjct: 425 LTIHYQDGIVKGQVQEIDKGEKKYGKS 451 >gi|332283949|ref|YP_004415860.1| exodeoxyribonuclease VII large subunit [Pusillimonas sp. T7-7] gi|330427902|gb|AEC19236.1| exodeoxyribonuclease VII large subunit [Pusillimonas sp. T7-7] Length = 444 Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats. Identities = 132/492 (26%), Positives = 215/492 (43%), Gaps = 57/492 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +VS+L+ + ++ S+ S + VRGE+S + +SGH YFS+KD + + A+ Sbjct: 2 PPDTDGVLTVSQLNRRVGDLLSSHFSRIWVRGEVSNFT-QAASGHWYFSVKDEGAAVRAV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++G + F+P+ G +F +T + YQ+ +ESL +G G L A K KL Sbjct: 61 MFRGRAQAVGFVPKPGEKFEFRVNVTLYEPRGDYQVQVESLRRAGRGDLHEAFLILKDKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF K P+ +P+ I V+TS A +RD+L ++ R P + VII+P VQG + Sbjct: 121 EAEGLFDPARKRPVKALPQAIGVVTSLAAAALRDVLSALARRAPHVSVIIYPAPVQGLDA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q E D ++L RGGGS+EDLW FNDE + R IA S IP+IS Sbjct: 181 AGRLNQALQQAIQRNE------VDTLLLVRGGGSLEDLWSFNDEALARTIAASPIPVISG 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ AD+RAPTPT AAE+ ++ S++ A L +R ++ Sbjct: 235 VGHETDFTIADFVADVRAPTPTAAAELCCRSRQSCTSAVDAALATLAARQMRNLERSALR 294 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L+ + L + Q L RL L + L + + R+ Sbjct: 295 LDRAVALLVSPQQRLRQQGERLQTLVQRLAQAPARPHEARAARLAMLSARLTHASP--RP 352 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 R + + + + Sbjct: 353 AGLRSDVAAQARRLAAE------------------------------------------- 369 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 +E L + ++ + + LQ+ L+RGY ++ N + +L + Sbjct: 370 LERGLERR----QQRLAASMQTLQALNPHKILERGYAIVRKDNGEVVKNALDLNVGESLN 425 Query: 487 INFFDGQANAIV 498 + G V Sbjct: 426 VELGRGSVRVSV 437 >gi|107023481|ref|YP_621808.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia AU 1054] gi|116690564|ref|YP_836187.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia HI2424] gi|105893670|gb|ABF76835.1| Exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia AU 1054] gi|116648653|gb|ABK09294.1| Exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia HI2424] Length = 460 Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats. Identities = 138/506 (27%), Positives = 233/506 (46%), Gaps = 60/506 (11%) Query: 2 NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 +PFS + VS L+ + ++E + + + GE+S + +SGH YFS+KD Sbjct: 5 SPFSAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +++ ++++G EF P EG V +T + + Q+ +E++ +G G L A Sbjct: 64 QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 + K +L EGLF+ + K P+P P+ I ++TS A +RD+L ++ R P + VI++P Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +++ A+ N +E D++++ RGGGSIEDLW FNDE + RAIA Sbjct: 184 APVQGAGSAEKLVAAVATANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S +P++S +GHETD+T+AD+AADLRAPTPTGAAE+A P + L + + L + R Sbjct: 238 SELPVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLREVDERQRALARGMAR 297 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L+ L + L + + L R + +L L + F Sbjct: 298 RLEQRAQQLDWLARRLVSPAERLQRQRTHVQQLAARLASAASRPVRDARARFA------- 350 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + Q+ Q R + + +A L R T Sbjct: 351 ---------------------LAQLRWQRARPDASQARHALAGLSQRLASALQRRHERDT 389 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKR 477 VS L+ + + TL+RGY ++ D + Sbjct: 390 ---------------------ARVSACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPN 428 Query: 478 NLATKTRILINFFDGQANAIVINKAP 503 L + R+ ++ +G A+ + + P Sbjct: 429 ALKPQRRLTVHLAEGSADVSLADVQP 454 >gi|315658201|ref|ZP_07911073.1| exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis M23590] gi|315496530|gb|EFU84853.1| exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis M23590] Length = 445 Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats. Identities = 154/492 (31%), Positives = 231/492 (46%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD +S I A+++KG Sbjct: 5 LSVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-RHSSGHLYFNVKDQNSVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 KI F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EGL Sbjct: 64 AAKINFDPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQRLEELKKKLTKEGL 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F Q+K IP PK IA++T+ TGA IRDI I R+P + I VQG + ++I Sbjct: 124 FDQQYKKSIPKYPKKIAILTASTGAAIRDIQTTIESRYPLVEKIPISTLVQGTQAKQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIRYADSL-------NVDTIIVGRGGGSIEDLWNFNEEEVVRAIYNCQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + I+ L + Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYDLMQQIKQQQFTLTRYIRQRIEQHRKQLQHIS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + + + ++ NI+ Sbjct: 297 SYYKFKQPSLLYDQQIQRRDDLE-------KQLNLKIITKLKEQKQNLQIIQQRFNIKNF 349 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +QHIL +Q+ Q+ + I + K+ + Sbjct: 350 KQHILTEQRQTNQLETNLTKIIQHQLKQFSTL---------------------------- 381 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + L + NT+ RGY+ I +N +T +L I +N Sbjct: 382 ------------LHNQVEQLNHLSPTNTMLRGYSII-HKDNQVVTSTHDLTVNDDITLNM 428 Query: 490 FDGQANAIVINK 501 DGQ A + Sbjct: 429 KDGQVEATIKKV 440 >gi|289550705|ref|YP_003471609.1| Exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis HKU09-01] gi|289180237|gb|ADC87482.1| Exodeoxyribonuclease VII large subunit [Staphylococcus lugdunensis HKU09-01] Length = 445 Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats. Identities = 155/492 (31%), Positives = 231/492 (46%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD +S I A+++KG Sbjct: 5 LSVSTLTKYIKYKFDQDPHLQSVLIKGELSNFK-RHSSGHLYFNVKDQNSVISAMMFKGN 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 KI F P+EG E L+ +++ + YQI + + G G L LE+ KKKL +EGL Sbjct: 64 AAKINFDPKEGDEVLIEARVSVYERRGNYQIYVNKMQLDGIGNLYQRLEELKKKLTKEGL 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F Q+K IP PK IA++T+ TGA IRDI I R+P + I VQG + ++I Sbjct: 124 FDQQYKKSIPKYPKKIAILTASTGAAIRDIQTTIESRYPLVEKIPISTLVQGTQAKQDII 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I ++L D II+ RGGGSIEDLW+FN+E +VRAI N PIISA+GHET Sbjct: 184 EKIRYADSL-------NVDTIIVGRGGGSIEDLWNFNEEEVVRAIYNCQTPIISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+AAD+RA TPT AA +A P + L + + L I + IK L + Sbjct: 237 DFTLSDFAADIRAATPTQAAVIATPDQYDLMQQIKQQQFTLTRYIRQRIKQHRKQLQHIS 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 R D L + + + ++ NI+ Sbjct: 297 SYYKFKQPSLLYDQQIQRRDDLE-------KQLNLKIITKLKEQKQNLQIIQQRFNIKNF 349 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +QHIL +Q+ Q+ + I + K+ + Sbjct: 350 KQHILTEQRQTNQLETNLTKIIQHQLKQFSTL---------------------------- 381 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + L + NT+ RGY+ I +N +T +L I +N Sbjct: 382 ------------LHNQVEQLNHLSPTNTMLRGYSII-HKDNQVVTSTHDLTVNDDITLNM 428 Query: 490 FDGQANAIVINK 501 DGQ A + Sbjct: 429 KDGQVEATIKKV 440 >gi|149922023|ref|ZP_01910464.1| exodeoxyribonuclease VII, large subunit [Plesiocystis pacifica SIR-1] gi|149817075|gb|EDM76556.1| exodeoxyribonuclease VII, large subunit [Plesiocystis pacifica SIR-1] Length = 444 Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats. Identities = 125/489 (25%), Positives = 212/489 (43%), Gaps = 52/489 (10%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 ++VSE +E +++ + V GE+S + SGHAYF+LKD + +W ++ Sbjct: 2 FAVSEAVELAHRTLEQHIAGLWVEGEVSNLV-LPRSGHAYFTLKDGRGALPTAMWATSVR 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ F +EG V G++ + ++Q+ E P G G L ALE+ K+KL +EGLF+ Sbjct: 61 RLRFRLQEGQRLRVFGRMGIYAAQGRFQLYAERAEPVGVGELALALEQLKRKLHDEGLFA 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I V+TSP GA + DI++ + R P +++ P KVQG E P E+ A+ Sbjct: 121 EARKRPLPAWPRGIGVVTSPNGAAVHDIIKVVRRRMPTPILLSPAKVQGPEAPYELIAAL 180 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 L ++IIL RGGGS+EDLW FN E + RA+ + +P++SA+GHE D T Sbjct: 181 RL---LARAAEARDIEVIILGRGGGSMEDLWAFNHEGLARAVVDCPVPVVSAVGHEVDVT 237 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D AD RA TP+ A E+ VP + L + + R+ I R L+ + L Sbjct: 238 VCDLVADRRAATPSQAGELVVPDRRELAARFDEYQRRMVRNIERRTVDLGARLHGGSRRL 297 Query: 315 PNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + R +L+ L + + R + R+ + + + R+ + Sbjct: 298 ERWGRSWVREQRGQLEHSHARLLVEVRGALEADRRRHRALAERLAAVDPRVRVAQQRRAL 357 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E ++ + + Sbjct: 358 HELERRLIR-----------------------------------------------AGRS 370 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 ++ L + + L RGY +D I + + + + +GQ Sbjct: 371 MTAELRPRLARAAGKLDALSPLAVLGRGYALARDEGGRVIRKASEVEVGDAVSLRLSEGQ 430 Query: 494 ANAIVINKA 502 + V +KA Sbjct: 431 LSVEVRSKA 439 >gi|223937606|ref|ZP_03629509.1| exodeoxyribonuclease VII, large subunit [bacterium Ellin514] gi|223893769|gb|EEF60227.1| exodeoxyribonuclease VII, large subunit [bacterium Ellin514] Length = 469 Score = 326 bits (835), Expect = 7e-87, Method: Composition-based stats. Identities = 126/495 (25%), Positives = 232/495 (46%), Gaps = 55/495 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSE++ +K ++E + V V GE++ +R SSGH YF++KD S++ ++++ Sbjct: 23 VLTVSEVTSKVKGLLERQIGQVWVTGEVTNFRAQ-SSGHFYFTIKDVESQLSCVLFRNDA 81 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++G + ++ G++T + +YQ+ + ++ G G L A EK K+KL EGLF Sbjct: 82 RDSRNFIQDGRKVILQGELTVYVPRGQYQMRVTAVELQGVGALQAAFEKLKQKLNTEGLF 141 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K +P P+ I ++TSPTGA IRD+L I R P L +I+ P +VQG +EIA Sbjct: 142 AQERKRALPRFPQCIGIVTSPTGAAIRDVLHVIQRRNPALEIILAPCRVQGQGAAEEIAA 201 Query: 193 AIL---QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +I + N+ + D+I++ RGGGS+EDLW FN+E++ RAI S +P++SA+GH Sbjct: 202 SIRLLNEWNSKMSPASGQPLDLILITRGGGSLEDLWAFNEEVVARAIFESQLPVVSAVGH 261 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+T++D+ AD RA TP+ AAE+ L + AR+ + + ++ K + Sbjct: 262 EIDFTISDFVADFRAATPSAAAEIITQDVVASCQFLSAVNARMRELFRQRLEDKEYEMVH 321 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 LL+ L + + ++ LD L L + + + + ++ R++ ++ Sbjct: 322 LLQRLQRTHPSRRVNEFLQHLDDLRSSLLRCAKHGVRNQQTDWRNLFERLQRVRPRQLLK 381 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R+ + + Q + H++ +R Sbjct: 382 QRRELLNQAQNRLH--------------------------------EQAGHHLQNCQSR- 408 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRIL 486 ++ L+ + L RGY+ D I + + ++ Sbjct: 409 --------------LATLNARLRLLGPEQVLARGYSITLDAETGALIYSDKQVRAGQKLK 454 Query: 487 INFFDGQANAIVINK 501 G+ + V + Sbjct: 455 TRLKTGEVRSTVDDG 469 >gi|103488581|ref|YP_618142.1| exodeoxyribonuclease VII large subunit [Sphingopyxis alaskensis RB2256] gi|98978658|gb|ABF54809.1| Exodeoxyribonuclease VII large subunit [Sphingopyxis alaskensis RB2256] Length = 475 Score = 325 bits (834), Expect = 8e-87, Method: Composition-based stats. Identities = 163/380 (42%), Positives = 227/380 (59%), Gaps = 1/380 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + P SVS+LS +K VE + V VRGE+SG + +SGH Y +LKD+++ Sbjct: 20 AEAAPGDNVPPLSVSQLSAAIKRTVEDGFARVRVRGELSGAK-RAASGHFYAALKDDNAL 78 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID ++WKG ++ F PE+GIE + GK+TT+PG SKYQ+++ESL +G G L+ EK Sbjct: 79 IDMVMWKGQAARLAFRPEDGIEVIATGKLTTYPGRSKYQLVVESLEVAGEGALMLLFEKL 138 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 K +L EGLF K P+P++P+ I V+TSPTGAVIRDIL R++ R P VI++PV VQG Sbjct: 139 KARLGGEGLFDRDRKQPLPYLPRTIGVVTSPTGAVIRDILHRLADRCPSHVIVWPVLVQG 198 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + ++A AI + L G RPD++I+ARGGGSIEDLW FN+E++VRAIA+ IP Sbjct: 199 EGAAAQVAAAIRGFDALAPGGKVARPDLVIVARGGGSIEDLWAFNEEVVVRAIADCRIPT 258 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TLADYAAD+RAPTPT AAEMAVPV+ LQ+ L R+ R + Sbjct: 259 ISAVGHETDVTLADYAADMRAPTPTAAAEMAVPVRAELQAQLATWGGRMIGAANRQQALR 318 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L +L + LP D + R RLD + L + ++ L Sbjct: 319 GERLTALARHLPRRDALYAPQRQRLDDVGERLGRGQRQRLAMLGERLGARGAALRPALLA 378 Query: 364 HNIQKNRQHILEKQQHIEQI 383 ++R + + + + Sbjct: 379 RAWDRDRAKLDGLGRLLASL 398 Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 5/205 (2%) Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 D + ++ + NRQ L + + + + + Sbjct: 272 DYAADMRAPTPTAAAEMAVPVRAELQAQLATWGGRMIGAANRQQAL-RGERLTALARHLP 330 Query: 389 RYIFLE---KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL-SHKIKSCHTSVSI 444 R L ++ + L + R+ L + + L + + Sbjct: 331 RRDALYAPQRQRLDDVGERLGRGQRQRLAMLGERLGARGAALRPALLARAWDRDRAKLDG 390 Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 R+L S + L RGY ++D +T + + F DG+ V P Sbjct: 391 LGRLLASLDPRALLSRGYAMVRDAGGAIVTSAAKARDAGHLRLQFADGELPVTVGEGGDP 450 Query: 505 KEQPTKKCQLHNNKREKQGTQGELF 529 + + + QGELF Sbjct: 451 APSSGPRPARKASPSAPKAGQGELF 475 >gi|323700411|ref|ZP_08112323.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. ND132] gi|323460343|gb|EGB16208.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio desulfuricans ND132] Length = 496 Score = 325 bits (834), Expect = 9e-87, Method: Composition-based stats. Identities = 133/526 (25%), Positives = 220/526 (41%), Gaps = 62/526 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +VSEL+ +K ++E+ V VRG++S +SGH YF+L D + + + +K Sbjct: 2 SNILTVSELTKSVKALLEAEFPFVWVRGQVSNL-ARPASGHVYFTLTDGDAALSVVWFKS 60 Query: 72 TLNKIEFL---------------------------PEEGIEFLVIGKITTFPGSSKYQII 104 + E + E+G+E L G++ + +YQ++ Sbjct: 61 SQRSAEPVRQGGDMVNPLTGEIEETEGGTALTGSGLEDGLEVLCAGRLNVYEPRGQYQLV 120 Query: 105 IESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ 164 E + G G L A E KKKL E+G F + K +P P+ +AVITS +GA IRD L+ Sbjct: 121 AELVQARGVGDLAVAFEALKKKLAEKGYFDEDRKLGLPRDPRRVAVITSKSGAAIRDFLR 180 Query: 165 RISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 R + I+PV VQGD P +IA A+ ++ ++ +L RGGGS+ED Sbjct: 181 IADTRGTGAEIRIYPVLVQGDRAPGQIAAALDLVDAEGWA------EVAVLIRGGGSLED 234 Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283 LW FN E + AI + +P+++ +GHE D ++AD+ AD RA TP+ AA+ P +E L Sbjct: 235 LWAFNTEAVADAIYRARLPVLTGVGHEPDVSIADFVADKRAATPSHAAQELWPRRETLAQ 294 Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEI 341 + L+ LN + K L KAL + + L R L L+ Sbjct: 295 RVDALDLGLNRAYEGWLSDKAGAFEQLRKALVWLSPARRLERMEDRFSALMARLQGAGLD 354 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 F + + F H + + + +E+ Sbjct: 355 HYFDRAGETVRAAEGLDRAFGTHRLDGLSRDAAGLARRLERAFGP--------------- 399 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 R+ L + L R+ ++ +++ L+ + L+RG Sbjct: 400 ---------ERVDRLAEGVAGLGQRLTSSGQGRLDGMAQRLAVLETGLRGLDPEGPLERG 450 Query: 462 YTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 Y ++ F+ R + + I DG+ A V + P +E Sbjct: 451 YALVRVAGTGEFLRDPRRVTKGDALDITVRDGRVAATVTDTRPNEE 496 >gi|53725862|ref|YP_103835.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei ATCC 23344] gi|67641289|ref|ZP_00440071.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei GB8 horse 4] gi|124385302|ref|YP_001027030.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei NCTC 10229] gi|126448505|ref|YP_001081679.1| exodeoxyribonuclease VII large subunit [Burkholderia mallei NCTC 10247] gi|134279594|ref|ZP_01766306.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 305] gi|254196541|ref|ZP_04902965.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei S13] gi|254202540|ref|ZP_04908903.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei FMH] gi|254356227|ref|ZP_04972503.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei 2002721280] gi|52429285|gb|AAU49878.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei ATCC 23344] gi|124293322|gb|ABN02591.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei NCTC 10229] gi|126241375|gb|ABO04468.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei NCTC 10247] gi|134248794|gb|EBA48876.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei 305] gi|147746787|gb|EDK53864.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei FMH] gi|148025224|gb|EDK83378.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei 2002721280] gi|169653284|gb|EDS85977.1| exodeoxyribonuclease VII, large subunit [Burkholderia pseudomallei S13] gi|238522198|gb|EEP85644.1| exodeoxyribonuclease VII, large subunit [Burkholderia mallei GB8 horse 4] Length = 460 Score = 325 bits (834), Expect = 9e-87, Method: Composition-based stats. Identities = 130/490 (26%), Positives = 226/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + +L L + F+ + R + + + RQ + Sbjct: 314 ISPAERLQRQAMHVGQLAARLAAAGARPVRDARARFSLVQLRWQRARP--DFAQARQVLA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q ++ + + RI + Sbjct: 372 AFAQRLDATL-------------------------QRRIERDTARV-------------- 392 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 + L+ + + TL+RGY ++ D + +L + R+ ++ +G Sbjct: 393 --------AACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|254446514|ref|ZP_05059990.1| exodeoxyribonuclease VII, large subunit [Verrucomicrobiae bacterium DG1235] gi|198260822|gb|EDY85130.1| exodeoxyribonuclease VII, large subunit [Verrucomicrobiae bacterium DG1235] Length = 460 Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats. Identities = 137/499 (27%), Positives = 230/499 (46%), Gaps = 57/499 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 D P SV++ + +K ++E N+ V GE+S R +SGH YFSLKD S+I A++++ Sbjct: 9 DLPRVSVTKYTAAIKKLLEGNIPPCWVVGEVSNLR-RQASGHIYFSLKDAGSQIPAVMFR 67 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G ++++F P +G++ L G+I+ + +YQ++I L SG G L E+ K+KL +E Sbjct: 68 GQASRLKFAPADGMQVLAFGEISVYEPYGRYQLVIRELKESGEGRLFREFERLKRKLADE 127 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKE 189 GLF + K IP P +A++TSPTGA ++D ++ + R + + +FP KVQG +E Sbjct: 128 GLFDSERKRAIPNFPLRVAIVTSPTGAALQDFIRILKRRGWGGGLHVFPAKVQGVGSAEE 187 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I +AI +N L D++++ARGGGSIEDLW FN+E + RA+A S +P+IS +GH Sbjct: 188 IESAIRYVNEL------GVYDLLVVARGGGSIEDLWSFNEERVARAVAESEVPVISGVGH 241 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+TL+D+AAD RA TP+ AEM L+++ + + + L+ Sbjct: 242 EIDFTLSDFAADARAETPSAVAEMISSAYLETIERYRTAREALDSLAVEGLAERELALDR 301 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L + L + R+D L + + F Sbjct: 302 LRRELKSVSPVAALERAFLRIDELGTRFLSAYRTSVQERRNVFQG--------------- 346 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 L + + L + +L R+ Sbjct: 347 --------------------------------KERRYLAQDVSGAVLRLRDRLDRLERRM 374 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + L + + + + L++ TLKRGY ++D + +T+ ++ Sbjct: 375 DGCLMAGVAELRSRLDVAGATLKAIGPAATLKRGYAILEDASGKPLTRIAATQRGAAVVA 434 Query: 488 NFFDGQANAIVINKAPPKE 506 + DG+ V Sbjct: 435 SLSDGRLEMTVDAVDAAPS 453 >gi|78067344|ref|YP_370113.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. 383] gi|77968089|gb|ABB09469.1| Exodeoxyribonuclease VII large subunit [Burkholderia sp. 383] Length = 460 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 132/490 (26%), Positives = 228/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + + GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLESEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG ++ A+ Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSADKLVTAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T Sbjct: 200 ETANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AADLRAPTPTGAAE+A P + L + + L + R ++ + L+ L + L Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVGERQRALARGMERRLEQRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R +++L L + F R + + + RQ + Sbjct: 314 VSPAERLQRQRTHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPSQARQALA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + + + R + R Sbjct: 372 GLSQRLALAL-------------------------QRRHERDTARVSACAAR-------- 398 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 L+ + + TL+RGY ++ D + L + R+ ++ +G Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRTPNALKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|83719967|ref|YP_441299.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis E264] gi|83653792|gb|ABC37855.1| exodeoxyribonuclease VII, large subunit [Burkholderia thailandensis E264] Length = 561 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 129/490 (26%), Positives = 224/490 (45%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 122 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 180 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG + V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 181 AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 240 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K +P P+ I V+TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 241 ERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 300 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 301 ATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVPVVCGVGHETDFT 354 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 355 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGLRRGLDARAQQLDWLARRL 414 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + +L L + F + R + ++ RQ + Sbjct: 415 ISPAERLQRQSMHVGQLAARLAAAGARPVRDARARFALVQLRWQRARP--DVAPARQVLA 472 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q ++ + + R+ + Sbjct: 473 TLAQRLDATL-------------------------RRRVERDTARV-------------- 493 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + L+ + + TL+RGY I + L + R+ ++ +G Sbjct: 494 --------AACAARLEVLSPQRTLERGYAALIDTQTGRAVRAPAALKPQRRLTVHLAEGS 545 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 546 ADVSLADVQP 555 >gi|302387569|ref|YP_003823391.1| exodeoxyribonuclease VII, large subunit [Clostridium saccharolyticum WM1] gi|302198197|gb|ADL05768.1| exodeoxyribonuclease VII, large subunit [Clostridium saccharolyticum WM1] Length = 441 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 125/496 (25%), Positives = 226/496 (45%), Gaps = 79/496 (15%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV++++ ++K++ + + + ++GE+S + H+SGH YF+LKD S + A+++ G Sbjct: 4 VYSVTQVNAYIKNMFAQDFALNRISIKGEVSNCK-YHTSGHIYFTLKDGTSSMAAVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F EEG + + G + + +YQ+ + + G G L +K + +L E G Sbjct: 63 HRKGLAFRLEEGQQVVAKGSVEVYERDGRYQLYAQEITKEGIGDLFERFQKLRDELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +FS ++K PIP K + ++T+PTGA IRDI+ + R P +++ ++P VQG+ + I Sbjct: 123 MFSPEYKKPIPKYAKTVGIVTAPTGAAIRDIMNISARRNPYVQLYLYPALVQGENAKESI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L+ + D++I+ RGGGSIEDLW FN+E + RA+ N + P+ISA+GHE Sbjct: 183 GKGIRILDQM-------GLDVLIVGRGGGSIEDLWAFNEEAVARAVFNCTTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ DY AD+RAPTP+ AAE+AV Sbjct: 236 TDVTITDYVADMRAPTPSAAAELAVFDYG------------------------------- 264 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + L +E + R H N ++K I ++R Sbjct: 265 ------------LFQEQTGLYGNTLLRTMERKLERCRYHGNQYALKLKLFDPKRRIHESR 312 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q +++ + ++ ++ +R + ++ R++ + Sbjct: 313 QRLVDIEDKLKSLIL-------------------------SRTAAERSRAEESRFRMQQL 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + + L + + + GY + D + I + L T RI + Sbjct: 348 IEKQAVRDRHRLELLISRLDARSPLKRIGGGYGYVTDEKDKRIDSVKQLHTGDRIGVRLR 407 Query: 491 DGQANAIVINKAPPKE 506 DG A++ + A K Sbjct: 408 DGGIEAVISSIARAKS 423 >gi|299822997|ref|ZP_07054883.1| exodeoxyribonuclease VII large subunit [Listeria grayi DSM 20601] gi|299816526|gb|EFI83764.1| exodeoxyribonuclease VII large subunit [Listeria grayi DSM 20601] Length = 446 Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats. Identities = 149/495 (30%), Positives = 238/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 SV L+ +++ +++ L HV V+GEIS + +SGH YF++KD+ + I +++ Sbjct: 5 KYLSVIALTKYIERKFDADPYLKHVYVKGEISNLK-KPASGHIYFTVKDDLAMIRCVMFA 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ K+ F PE+G+ + G++ F + +YQ E + P G G L LE+ K KL EE Sbjct: 64 KSVAKLGFDPEDGMNIRLQGRVNVFTKAGRYQFYAEEMEPDGVGALYVKLEQLKSKLTEE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+D HK P+P P +AV+TS TGA IRD++ I R P +++++P VQGD K Sbjct: 124 GLFADSHKKPLPLFPAKVAVVTSRTGAAIRDVITTIQRRMPTTQILVYPTVVQGDHAGKT 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D+II RGGGS+E+LW FN+E +VRA+ +S IPIISA+GH Sbjct: 184 IVANIERINQR------NDIDVIITGRGGGSLEELWAFNEEPVVRAVYHSDIPIISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L D+AAD+RA TPT AAE+AVP + L+ L+ RL N + R+++ K + Sbjct: 238 ETDFALTDFAADVRAATPTAAAELAVPDQRDLKERLLERHYRLVNQMNRVVERKEVQMKR 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + + ++D L L + +K + + RI+ L +I+ Sbjct: 298 LQDRLKLLTPKRQMEQQAEKIDYFSERLVRALRTQVTQKRTDWQQLAYRIEHVELAKDIR 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 R+ + ++Q +++ ++ + + Sbjct: 358 AERERLELREQSLKRALRTQIDRKRESFFRHVQA-------------------------- 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + +KRGY I + L L+ Sbjct: 392 ---------------------LEHLSPLALIKRGYALPY-KEGQVIRSAKELTVGDSFLL 429 Query: 488 NFFDGQANAIVINKA 502 DGQ A V K Sbjct: 430 KLQDGQIKAEVTAKE 444 >gi|332977567|gb|EGK14337.1| exodeoxyribonuclease VII large subunit [Desmospora sp. 8437] Length = 456 Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats. Identities = 145/494 (29%), Positives = 232/494 (46%), Gaps = 60/494 (12%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +V+ L L ++E + LS + V+GEIS ++ H GH YF+LKD+ +RI A++ Sbjct: 5 EQDVLTVTGLVQRLTQVIEEDPGLSRIWVQGEISNFKH-HGRGHMYFTLKDDQTRIRAVM 63 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + G ++ F+P++G + L+ G++ F + Q+ + + P+G G L A ++ K+KL Sbjct: 64 FAGNNRRLRFMPKDGDDVLIRGRVGVFERDGQTQLYVTHMQPNGVGELYVAFQQLKEKLN 123 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187 EEGLFS K +PF P+ + V+TS GA +RDI+ I R + ++++PV VQG + P Sbjct: 124 EEGLFSPTLKKGLPFFPRCVGVVTSAHGAAVRDIITTIRRRSRGVDILLYPVPVQGPQAP 183 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 EIA A+ QLN E D+II+ RGGGS+E+LW FN+E++ R+I S IP++SA+ Sbjct: 184 LEIAQALDQLNQAGE------VDVIIVGRGGGSLEELWAFNEEVVARSIHQSRIPVVSAV 237 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ AD+RA TPT AAEM VP E LQ L ++ RL + + + L Sbjct: 238 GHETDTTIADFVADVRAATPTAAAEMIVPRLEELQIGLKAVQERLTKGMKQCLTDGRVRL 297 Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L L L + RLD L +L R+K Sbjct: 298 NRSLDRPVLRRPATGLEQAEQRLDILTGDLVRAAREGFAPVRSRLESRTYRLKGHHPALR 357 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ ++ Q+ + + T Sbjct: 358 VPRLKERLVRLQRQSKVGM----------------------------------------T 377 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTR 484 R+ V L + + + RGY+ + + I + Sbjct: 378 RLLREHRR---RWQGRVEH----LDALSPLKVMSRGYSLLYRYDGQELIKSVEQVQAGDL 430 Query: 485 ILINFFDGQANAIV 498 + I DG+ V Sbjct: 431 VRIRLSDGRLKCQV 444 >gi|241894942|ref|ZP_04782238.1| exodeoxyribonuclease VII [Weissella paramesenteroides ATCC 33313] gi|241871660|gb|EER75411.1| exodeoxyribonuclease VII [Weissella paramesenteroides ATCC 33313] Length = 420 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 137/491 (27%), Positives = 215/491 (43%), Gaps = 80/491 (16%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS L+ +LK + L V V GEIS YR GH YF +KD+ + + A ++K Sbjct: 5 LTVSALTAYLKRKFTADPYLKKVYVTGEISNYRQRP--GHQYFKIKDDQAVVSATMFKSA 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++++F E G++ V G + + + Y +IIE++ P G G L A E+ K+KL +EGL Sbjct: 63 FSRLKFQLEPGMKVNVTGHMDLYAPNGSYSLIIETIEPDGVGALYQAYEQLKEKLEKEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + IP P+ IAVITSP+GAVIRDI+ + R+P+ ++++P VQGD + Sbjct: 123 F-QARQAKIPLFPRKIAVITSPSGAVIRDIMTTVQRRYPIAEIVLYPAVVQGDGAVPSLC 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I +N + D++I+ RGGGSIEDLW FNDE + R + IP+IS++GHET Sbjct: 182 QQIDAVNQSSD------YDVLIIGRGGGSIEDLWAFNDEKLARQLLTVKIPVISSVGHET 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T+AD+ AD RA TPT AAE+A P Sbjct: 236 DTTIADFIADKRAATPTAAAELATP----------------------------------- 260 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + + + +L L+ I ++ + + + + Q Sbjct: 261 MPLADLWLAIQQDQQKL-------VMILQREIAQRKDYLSRLQQSYVLTNPERLYEGYLQ 313 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + Q + + +I + L R++ + Sbjct: 314 RLDIAQDKLIRTASL-------------------------QINQQKQQVATLKPRLKMSM 348 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 H++K LQ + L RGY+ + + + Q +A I I D Sbjct: 349 DHEMKQAQQRFGQAAAGLQLVSPLAILARGYS-VTKKESEVVRQLDQVALDDNISIQVSD 407 Query: 492 GQANAIVINKA 502 G+ A V K Sbjct: 408 GEILARVTEKK 418 >gi|115352643|ref|YP_774482.1| exodeoxyribonuclease VII large subunit [Burkholderia ambifaria AMMD] gi|115282631|gb|ABI88148.1| Exodeoxyribonuclease VII large subunit [Burkholderia ambifaria AMMD] Length = 460 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + + GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDGQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++ A+ Sbjct: 140 ERKRPLPAHPRGIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSAEKLVAAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T Sbjct: 200 QAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AADLRAPTPTGAAE+A P + L + + + L + R ++ + L+ L + L Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVADRQRALARCLERGLEQRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R +++L L + F R + + + R + Sbjct: 314 VSPAERLRRQRIHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPTQARHALA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + + + R + R Sbjct: 372 GLSQRLTVAL-------------------------QRRHERDTARVSACAAR-------- 398 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 L+ + + TL+RGY ++ D + +L + R+ ++ +G Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRAPSSLKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|238028444|ref|YP_002912675.1| exodeoxyribonuclease VII large subunit [Burkholderia glumae BGR1] gi|237877638|gb|ACR29971.1| Exodeoxyribonuclease VII large subunit [Burkholderia glumae BGR1] Length = 466 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 136/490 (27%), Positives = 225/490 (45%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 27 PVSALNRAIGSMLERSFPLCWVSGEVSNFT-RAASGHWYFSIKDKDAQMRCVMFRGRAQH 85 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 F P EG V ++ + + Q+ +E++ +G G L A + K +L EGLF Sbjct: 86 APFTPREGDRIEVRALVSMYEPRGEVQLNVEAVRRTGQGKLFEAFLRLKAQLESEGLFDP 145 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 Q K P+P P+ I ++TS A +RD+L ++ R P L VI++P VQG +++A + Sbjct: 146 QRKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHLPVIVYPAPVQGSGAAEKLAAMV 205 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S++P++S +GHETD+T Sbjct: 206 ETANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASALPVVSGVGHETDFT 259 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AADLRAPTPTGAAE+ P + L L +A L + R + + L+ L + L Sbjct: 260 IADFAADLRAPTPTGAAELVSPQRALLLRELAERQAALARGLRRGLDARAQQLDWLARRL 319 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L+ R L +L L + F + ++ + + RQ + Sbjct: 320 VSPAERLARQRTHLQQLALRLASAGARPVRDARARFALV--MLRWQRVRPDAAAARQALA 377 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + ++ Sbjct: 378 GWSQRLATALRHRHERAA------------------------------------------ 395 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 VS L+ + + TL+RGY I + LA + R+ ++ +G Sbjct: 396 -----ARVSGCAARLEVLSPQRTLERGYAALIDTQTGRAVRAPGALAPQRRLTVHLAEGT 450 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 451 ADVSIADVQP 460 >gi|73540302|ref|YP_294822.1| exodeoxyribonuclease VII large subunit [Ralstonia eutropha JMP134] gi|123732989|sp|Q475F5|EX7L_RALEJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|72117715|gb|AAZ59978.1| Exodeoxyribonuclease VII large subunit [Ralstonia eutropha JMP134] Length = 448 Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats. Identities = 139/502 (27%), Positives = 223/502 (44%), Gaps = 59/502 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 +N + V EL++ + ++E VRGEIS + +SGH YFSLKD ++ Sbjct: 1 MPARNPREA--IPVGELNHAIATMLERGFPLTWVRGEISNFT-RAASGHWYFSLKDARAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I ++++G ++F P EG V +T + Q+ +E++ +G G L A + Sbjct: 58 IRCVMFRGRNQHVDFTPREGEAVEVRAVVTLYEARGDLQLGVEAMRRAGLGNLYEAFLRL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQ 182 K+KL + GLF+ + K P+P P+ I ++TS A +RD+L + R + V ++PV VQ Sbjct: 118 KEKLAQAGLFAPERKRPVPSHPRSIGIVTSLQAAALRDVLTTLRRRAPHVPVTVYPVPVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G ++IA+ + Q + +E D+IIL RGGGSIEDLW FN+E + AIA S++P Sbjct: 178 GAGAAQKIADMLDQASARRE------CDVIILCRGGGSIEDLWSFNEEAVAHAIARSAVP 231 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++S +GHETD+T+AD+ AD+RAPTPTGAAE+ P + HL L + R + Sbjct: 232 VVSGVGHETDFTIADFVADVRAPTPTGAAELVSPDRGHLLGLTRRAGDALVQSMRRELDR 291 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L+ L + + + L R R+D L R L L + + Sbjct: 292 RAQHLDWLARRVRSPLAQLQERRARVDNLARHLRSALRETVVAQRHR------------- 338 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 Q + I R +A L + R T Sbjct: 339 ---------------QQLLAIRWTACRPDMAAASADVARLSQRMQAAATRTHERQTQ--- 380 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 ++ L+ A + TL+RGY + D + L Sbjct: 381 ------------------RLARVAGALELLAPQRTLERGYAVLLDQRGRALRSPAELRAG 422 Query: 483 TRILINFFDGQANAIVINKAPP 504 + + + DG A+ + Sbjct: 423 SVVEAHLADGVADIAIAGVQAK 444 >gi|172061504|ref|YP_001809156.1| exodeoxyribonuclease VII large subunit [Burkholderia ambifaria MC40-6] gi|171994021|gb|ACB64940.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria MC40-6] Length = 460 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 229/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + + GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++ A+ Sbjct: 140 ERKRPLPAHPRGIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSAEKLVAAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T Sbjct: 200 QAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AADLRAPTPTGAAE+A P + L + + + L + R ++ + L+ L + L Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVADRQRALARCLERGLEQRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R +++L L + F R + + + R + Sbjct: 314 VSPAERLRRQRTHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPTQARHALA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + + + R + R Sbjct: 372 GLSQRLTVAL-------------------------QRRHERDTARVSACAAR-------- 398 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 L+ + + TL+RGY ++ D + L + R+ ++ +G Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|170698601|ref|ZP_02889669.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria IOP40-10] gi|170136454|gb|EDT04714.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria IOP40-10] Length = 460 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 228/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + + E + + + GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAISTMFERSFPLLWISGEVSNFT-RAASGHWYFSIKDGQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++ A+ Sbjct: 140 ERKRPLPAHPRGIGIVTSLQAAALRDVLTTLARRAPHIPVIVYPAPVQGAGSAEKLVAAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S +P++S +GHETD+T Sbjct: 200 QAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASELPVVSGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AADLRAPTPTGAAE+A P + L + + + L + R ++ + L+ L + L Sbjct: 254 IADFAADLRAPTPTGAAELASPQRALLLREVADRQRALARCLERGLEQRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L R +++L L + F R + + + R + Sbjct: 314 VSPAERLRRQRTHVEQLAVRLASAASRPVRDARARFALAQLRWQRARP--DPTQARHALA 371 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + + + R + R Sbjct: 372 GLSQRLTVAL-------------------------QRRHERDTARVSACAAR-------- 398 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQ 493 L+ + + TL+RGY ++ D + L + R+ ++ +G Sbjct: 399 --------------LEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGS 444 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 445 ADVSLADVQP 454 >gi|51473854|ref|YP_067611.1| exodeoxyribonuclease VII large subunit [Rickettsia typhi str. Wilmington] gi|81826290|sp|Q68W63|EX7L_RICTY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|51460166|gb|AAU04129.1| E.coli exonuclease VII [Rickettsia typhi str. Wilmington] Length = 453 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 175/485 (36%), Positives = 259/485 (53%), Gaps = 54/485 (11%) Query: 13 PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 E+SVSE+S +K ++E+N H+ V+GEISG + SSGHAYF+LK+N + + W+ Sbjct: 12 KEFSVSEISNKIKELIENNFGHIKVKGEISGLKIS-SSGHAYFNLKENTAILACTCWRPI 70 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 L KI+F +G+E ++ GK++++ G+S+YQ+ +++L P+G G ++ L +RK +L +EGL Sbjct: 71 LVKIKFPLNDGMEVVIGGKLSSYSGNSRYQLSVDNLQPAGLGAMIQILNERKIRLEKEGL 130 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192 F+ + PIPF+P I VITS TGAVI+DI+ RI R P R+II+ V VQG+ E+A Sbjct: 131 FNKKR-IPIPFLPDKIGVITSITGAVIKDIIHRIRERCPTRIIIWQVSVQGENSSHEMAE 189 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N L+E +P +II+ARGGGSIEDLW FNDE++VRA NS IPIISA+GHE D Sbjct: 190 AIEGFNNLEE---IHKPSVIIVARGGGSIEDLWSFNDEILVRAAYNSKIPIISAVGHEAD 246 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TL D A D RAPTPT AAE AVPV+ L +++ + E L N RLIKY ++ + K Sbjct: 247 YTLIDLAVDKRAPTPTAAAEFAVPVRSILNNTIQSYEKILLNNTNRLIKYHEQSIVNYDK 306 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 ++ + LD L L I Sbjct: 307 IHRYFAYYINNRQQLLDETGFNLLDVLIRCI----------------------------- 337 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 K+ K+ R I Y + + ++ Sbjct: 338 --------------------ALKETKLKSFAKERINYAKIINYKILELTHQTAYLLKSVN 377 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + +K+ + + + +L S Y N LKRG+ + NF++ K + + I FFDG Sbjct: 378 NTLKNFEYKLELNSTLLASLDYHNVLKRGFAIVTGDAGNFLSSKSTATNEQSLNIKFFDG 437 Query: 493 QANAI 497 + N + Sbjct: 438 EINVV 442 >gi|257888472|ref|ZP_05668125.1| exonuclease VII [Enterococcus faecium 1,141,733] gi|257824526|gb|EEV51458.1| exonuclease VII [Enterococcus faecium 1,141,733] Length = 445 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 144/501 (28%), Positives = 243/501 (48%), Gaps = 61/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IA++TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL + I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVHQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ I+ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPIY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPK 505 + I++ DG V + Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445 >gi|257899151|ref|ZP_05678804.1| exonuclease VII [Enterococcus faecium Com15] gi|257837063|gb|EEV62137.1| exonuclease VII [Enterococcus faecium Com15] Length = 445 Score = 324 bits (829), Expect = 3e-86, Method: Composition-based stats. Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IA++TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL +R I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ ++ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPK 505 + I++ DG V + Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445 >gi|86157520|ref|YP_464305.1| exodeoxyribonuclease VII large subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85774031|gb|ABC80868.1| Exodeoxyribonuclease VII large subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 474 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 145/515 (28%), Positives = 228/515 (44%), Gaps = 58/515 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V EL+ LK VE V V GE++ R +SGH YFSLKD+ + I A++W Sbjct: 8 PYTVRELTRALKSAVEPRFRDVWVAGEVANLR-RQASGHVYFSLKDDDAVIGAVMWASQA 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F P EG+E L G + +P KYQ++++ L P G+G L++ K++L +GL Sbjct: 67 RRLAFAPAEGLEVLARGFVEIYPPHGKYQLVVQELEPRGAGAQALQLQQLKERLQADGLL 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+PF+P + V TSPTGA +RD L+ + RFP V+I P +VQG+ + + Sbjct: 127 DPARKRPLPFLPARVGVATSPTGAALRDFLRVLHARFPSAPVLIAPCRVQGEGAAATVIS 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ L D++++ RGGGS EDL FNDE + RAIA +P++SA+GHE D Sbjct: 187 AVRALCRA-------GVDVVVVTRGGGSQEDLGAFNDERLARAIAACPVPVVSAVGHEVD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD AD+RA TPT AA++ VPV++ L + L ARL ++ + TL +L Sbjct: 240 VTVADLVADVRAATPTHAAQLVVPVRDELLERVAALRARLARAEAGAVEGRRRTLRALRA 299 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + LS +RLD L E + R+ + + R+ ++ R Sbjct: 300 ELADPKHLLSREHHRLDDLAHRAEAAVRGPRRRERAALDALRARLTRLEPRARVRALRAR 359 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + R + R+E Sbjct: 360 MESATRRLGGWQAATFRREAM--------------------------------RLER--- 384 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 L+ L RG+ + + + + + I + +G Sbjct: 385 ------------LGARLEPANVAKLLARGFALALR-DGHLLLRSTDAQVGDAIRVALAEG 431 Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGE 527 +A + E P + E+ G GE Sbjct: 432 WLDARITG-QDAGEDPLPGRAAPAGEPERPGHGGE 465 >gi|293568314|ref|ZP_06679638.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1071] gi|291589026|gb|EFF20850.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1071] Length = 445 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 145/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTKYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IAV+TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL +R I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ ++ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPK 505 + I++ DG V + Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445 >gi|285017881|ref|YP_003375592.1| exodeoxyribonuclease VII large subunit [Xanthomonas albilineans GPE PC73] gi|283473099|emb|CBA15604.1| probable exodeoxyribonuclease vII large subunit protein [Xanthomonas albilineans] Length = 458 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 140/509 (27%), Positives = 225/509 (44%), Gaps = 58/509 (11%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + S+L+ + ++ES V GE+ +SGH YF+LKD +++ Sbjct: 2 PDRTDQILTPSQLNTLARDLLESAFPLAWVEGELGNVT-RPTSGHLYFTLKDARAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K + F+P EG+ L G++T + YQ+++E L +G G L A E K KL Sbjct: 61 MFKPKSQWLPFVPREGLRVLARGRLTLYEARGDYQLVLEHLEEAGEGALRRAFEALKAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ + K P+P + +AVITSP+GA +RD+L + R P L+V I P VQG+ Sbjct: 121 AGEGLFAIERKRPMPAFVRRLAVITSPSGAAVRDVLSVLGRRMPLLQVDILPTLVQGNSA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +IA + Q C R D I+L RGGGS+EDLW FNDE +VRAIA S+ P++SA Sbjct: 181 AAQIAILLRQ------ADACKRYDAILLTRGGGSLEDLWAFNDEHLVRAIAASNTPVVSA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TLAD+AADLRAPTP+ AAE+ P + + + L + L + ++ Sbjct: 235 VGHETDVTLADFAADLRAPTPSVAAELLAPDQRDITARLSAQHSALQHWQRHRLRQAQQR 294 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L L + L + R R L + R+ H +++ Sbjct: 295 ADQALLRLQAQSPQVQLQLLQRRQRDAARRLTALWKQQQERRQAQLRHAAAILRTSQPQR 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + R + +H+ + + L+ Sbjct: 355 RLAMLRTRLQALGRHLPVAMARRLQVQTQ------------------------------- 383 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKT 483 + R +++ + T+ RGYT + DT+ N + + Sbjct: 384 ----------------RLRALARAMEAISPLATVARGYTILTDTDTGNVVRSVTQVKPGA 427 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKC 512 + DG+ + V + +P + Sbjct: 428 PLRARLLDGELDLRVDSPSPTLSAKLPRS 456 >gi|293571747|ref|ZP_06682766.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E980] gi|291608204|gb|EFF37507.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E980] Length = 445 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFHPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IA++TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAILTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVKNIRRV------EEMGDFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL +R I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ ++ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPK 505 + I++ DG V + Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445 >gi|257885165|ref|ZP_05664818.1| exonuclease VII [Enterococcus faecium 1,231,501] gi|261206505|ref|ZP_05921205.1| exonuclease VII [Enterococcus faecium TC 6] gi|289565415|ref|ZP_06445864.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium D344SRF] gi|294618977|ref|ZP_06698472.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1679] gi|257821017|gb|EEV48151.1| exonuclease VII [Enterococcus faecium 1,231,501] gi|260079215|gb|EEW66906.1| exonuclease VII [Enterococcus faecium TC 6] gi|289162744|gb|EFD10595.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium D344SRF] gi|291594638|gb|EFF26020.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1679] Length = 445 Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats. Identities = 145/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IAV+TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL +R I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ ++ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPK 505 + I++ DG V + Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445 >gi|229828871|ref|ZP_04454940.1| hypothetical protein GCWU000342_00956 [Shuttleworthia satelles DSM 14600] gi|229792034|gb|EEP28148.1| hypothetical protein GCWU000342_00956 [Shuttleworthia satelles DSM 14600] Length = 430 Score = 323 bits (827), Expect = 6e-86, Method: Composition-based stats. Identities = 122/492 (24%), Positives = 212/492 (43%), Gaps = 79/492 (16%) Query: 15 YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG- 71 Y+V ++++++ + + + + V+GE+S H SGH YFSLKD+ + A +W+ Sbjct: 6 YTVGQVNHYIAGLFQEDFLLRRIRVKGEVSNL-IYHKSGHIYFSLKDSSGVLGAAMWRSQ 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + F EG + +V G + + Y++I + G G L E KK+L E G Sbjct: 65 RASGLTFAMREGDQVVVSGTVQVYEKGGSYKLIASQIEKEGLGDLYVRFEALKKQLSEMG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F +K IP I ++T+PTGA IRDI+Q R+P + ++++P VQG++ I Sbjct: 125 MFDASYKKQIPRYATKIGIVTAPTGAAIRDIIQVSKRRYPGIEIVLYPALVQGEKAVASI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L+ + D++++ RGGGS+EDLW FN+E + RAI + P+ISA+GHE Sbjct: 185 VRGIQTLDAM-------GMDLLVVGRGGGSMEDLWAFNEESVARAIFDCRTPLISAVGHE 237 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+AV Sbjct: 238 TDTTIADFVADLRAPTPSAAAELAVFDYA------------------------------- 266 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + L R R + ++ + I +R+++ I+ R Sbjct: 267 -----SLQKDLRSKRER-------MASAMQYRLNTFRNRLADIEHRLETASPQEMIRNLR 314 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + ++Q RI + + + R+ Sbjct: 315 GRLDGARHRLDQA------------------------HPSRRISLMREEVLRARQRLCQD 350 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +++ +++ L + L G++ +QD + L I I Sbjct: 351 MDRRLEQKKQLLAVAVERLDGLSPVRKLASGFSYVQDKAGRRVEDAGKLKVGDFIHIYLH 410 Query: 491 DGQANAIVINKA 502 GQ +A V + Sbjct: 411 RGQLDAEVSGIS 422 >gi|293553171|ref|ZP_06673808.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1039] gi|291602581|gb|EFF32796.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1039] Length = 445 Score = 323 bits (827), Expect = 6e-86, Method: Composition-based stats. Identities = 144/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD++++I AI Sbjct: 1 MAQEYLTVTTLTKYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDYAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IAV+TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL +R I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ ++ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPK 505 + I++ DG V + Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445 >gi|69244727|ref|ZP_00602991.1| Exonuclease VII, large subunit [Enterococcus faecium DO] gi|257879353|ref|ZP_05659006.1| exonuclease VII [Enterococcus faecium 1,230,933] gi|257881781|ref|ZP_05661434.1| exonuclease VII [Enterococcus faecium 1,231,502] gi|257890179|ref|ZP_05669832.1| exonuclease VII [Enterococcus faecium 1,231,410] gi|257893507|ref|ZP_05673160.1| exonuclease VII [Enterococcus faecium 1,231,408] gi|258615759|ref|ZP_05713529.1| exodeoxyribonuclease VII large subunit [Enterococcus faecium DO] gi|260558795|ref|ZP_05830984.1| exonuclease VII [Enterococcus faecium C68] gi|293560488|ref|ZP_06676980.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1162] gi|294621589|ref|ZP_06700754.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium U0317] gi|314937885|ref|ZP_07845201.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133a04] gi|314941376|ref|ZP_07848269.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133C] gi|314950135|ref|ZP_07853421.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0082] gi|314951324|ref|ZP_07854378.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133A] gi|314992845|ref|ZP_07858246.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133B] gi|314998049|ref|ZP_07862937.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133a01] gi|68196318|gb|EAN10747.1| Exonuclease VII, large subunit [Enterococcus faecium DO] gi|257813581|gb|EEV42339.1| exonuclease VII [Enterococcus faecium 1,230,933] gi|257817439|gb|EEV44767.1| exonuclease VII [Enterococcus faecium 1,231,502] gi|257826539|gb|EEV53165.1| exonuclease VII [Enterococcus faecium 1,231,410] gi|257829886|gb|EEV56493.1| exonuclease VII [Enterococcus faecium 1,231,408] gi|260075254|gb|EEW63567.1| exonuclease VII [Enterococcus faecium C68] gi|291598754|gb|EFF29806.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium U0317] gi|291605636|gb|EFF35078.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium E1162] gi|313587891|gb|EFR66736.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133a01] gi|313592649|gb|EFR71494.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133B] gi|313596541|gb|EFR75386.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133A] gi|313599799|gb|EFR78642.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133C] gi|313642743|gb|EFS07323.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0133a04] gi|313643576|gb|EFS08156.1| exodeoxyribonuclease VII, large subunit [Enterococcus faecium TX0082] Length = 445 Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats. Identities = 145/501 (28%), Positives = 244/501 (48%), Gaps = 61/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTKYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF K +P PK IAV+TSP+GAVIRDI+ + R+P +++++FP VQG++ Sbjct: 120 MKEGLF-QGPKKMLPRFPKRIAVLTSPSGAVIRDIITTVKRRYPIVQLVLFPTVVQGNQA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I ++ D +I+ RGGGSIEDLW FN+E + RAI ++ P+IS+ Sbjct: 179 ADNVVRNIQRV------EEMGNFDTMIIGRGGGSIEDLWPFNEERVARAIYQANTPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + +ARL +R I+ K Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELAVPVLSEELMRIQERQARLQQAFVRQIQRKQER 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + ++ +LD+L + L + I K + + ++++ ++ Sbjct: 293 FERARRSYVFRQPERLYEGQTIKLDQLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLY 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ RQ ++ +E + ++K+ Sbjct: 353 RVKAARQETAYLEKRLE--------------------------------EKIQQYMKQQQ 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R + + L + + RGY+ N+ + + Sbjct: 381 QRFAQAV---------------QSLDLLSPLKIMGRGYSYTTL-NDQVVKSVTEIHQGDL 424 Query: 485 ILINFFDGQANAIVINKAPPK 505 + I++ DG V + Sbjct: 425 LTIHYQDGIVKGQVQEIDKGE 445 >gi|206561095|ref|YP_002231860.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia J2315] gi|198037137|emb|CAR53058.1| putative exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia J2315] Length = 460 Score = 322 bits (826), Expect = 7e-86, Method: Composition-based stats. Identities = 138/506 (27%), Positives = 234/506 (46%), Gaps = 60/506 (11%) Query: 2 NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 +PFS + VS L+ + ++E + + + GE+S + +SGH YFS+KD Sbjct: 5 SPFSAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +++ ++++G EF P EG V +T + + Q+ +E++ +G G L A Sbjct: 64 QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 + K +L EGLF+ + K P+P P+ I ++TS A +RD+L ++ R P + VI++P Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPPHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +++ A+ N +E D++++ RGGGSIEDLW FNDE + RAIA Sbjct: 184 APVQGAGSAEKLVAAVAAANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S +P++S +GHETD+T+AD+AADLRAPTPTGAAE+A P + L + + L + R Sbjct: 238 SELPVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLREVDERQRALARGMAR 297 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L+ L + L + + L R +++L L + F Sbjct: 298 RLEQRAQQLDWLARRLVSPAERLQRQRTHVEQLAARLASAASRPVRDARARFA------- 350 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + Q+ Q R + + +A L R T Sbjct: 351 ---------------------LAQLRWQRARPDASQARHALAGLSQRLASALQRRHERDT 389 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKR 477 VS L+ + + TL+RGY ++ D + Sbjct: 390 ---------------------ARVSACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPN 428 Query: 478 NLATKTRILINFFDGQANAIVINKAP 503 L + R+ ++ +G A+ + + P Sbjct: 429 ALKPQRRLTVHLAEGSADVSLADVQP 454 >gi|229916252|ref|YP_002884898.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sp. AT1b] gi|259646291|sp|C4L3F5|EX7L_EXISA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|229467681|gb|ACQ69453.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sp. AT1b] Length = 448 Score = 322 bits (826), Expect = 7e-86, Method: Composition-based stats. Identities = 132/503 (26%), Positives = 235/503 (46%), Gaps = 63/503 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 VSE+ ++K ++ + L V V GEIS ++ +SSGH YF+LKD+ SR+ A+++ Sbjct: 2 ANPLPVSEVVRYVKRQLDDDVLLRQVAVIGEISNFK-RYSSGHCYFTLKDDASRMKAVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +++F P++G++ + + K+T + + Q+ +E + G G L E RK++L E Sbjct: 61 SRDAKQLQFEPKDGMKVIAVSKVTMYEATGDVQLYVELMRQDGIGLLFERYEARKRELEE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F D+ K P+P P+ + ++TSP GA + DI + R P + + PV VQG+ Sbjct: 121 MGWFDDERKKPLPMFPERVGIVTSPKGAALHDIATTLRRRAPHVAITFAPVAVQGEMAAP 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+AI +N + D++I+ RGGGSIE+LW FN++++V AI S+IPIISA+G Sbjct: 181 QVASAIRWMNERTD------CDVLIVGRGGGSIEELWAFNEDVVVEAIYASTIPIISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL+D+ AD+RA TPT AAE+A + + + + L+ L+ + + + + Sbjct: 235 HETDFTLSDFVADVRAATPTAAAELATAMIDAQRKDVERLDNHLHKAVRSQLDESRSRVE 294 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 ++ + L + T+S R R + LE + + + + ++ + Sbjct: 295 RMINSYGLKSPRYTISQKRERFAQSEIRLEQGMRRHLTQATHQLRQLSQQLDVKRFSKTL 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 K + + + + Sbjct: 355 SKQGDEVNHMVERLRRTRP----------------------------------------- 373 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ + L + + L RGYT I+ + ++ + L + Sbjct: 374 --------LEQATLQFAQQVGRLHAVSPLAVLSRGYTFIE-QDGAYVQNVKQLRDGD-VS 423 Query: 487 INFFDGQANAIVINKAPPKEQPT 509 I F DG A A V + E+ T Sbjct: 424 IRFRDGHAIAEVKERIVGDEERT 446 >gi|312795274|ref|YP_004028196.1| Exodeoxyribonuclease VII large subunit [Burkholderia rhizoxinica HKI 454] gi|312167049|emb|CBW74052.1| Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) [Burkholderia rhizoxinica HKI 454] Length = 458 Score = 322 bits (825), Expect = 9e-86, Method: Composition-based stats. Identities = 132/490 (26%), Positives = 228/490 (46%), Gaps = 58/490 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + GE+S + +SGH YFS+KD+ ++I ++++G Sbjct: 19 PVSALNRAIGTLLERAFALAWIAGEVSNFT-RAASGHWYFSIKDDCAQIRCVMFRGRAQY 77 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 +F P EG V +T + + Q+ +E++ +G G L A K K +L EGLF+ Sbjct: 78 AQFTPREGDRIEVRATVTMYEPRGELQLNVEAVRRTGQGRLYEAFLKLKAQLEAEGLFAA 137 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K +P P+ I ++TS A +RD+L ++ R P + +I++P VQG E +A I Sbjct: 138 ERKRVLPSHPRAIGIVTSLQAAALRDVLTTLARRAPHVPIIVYPAPVQGAEAAARVAAMI 197 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + N E D++I+ RGGGSIEDLW FNDE + RAIA+S++PI+S +GHETD+T Sbjct: 198 VTANRRAE------VDVLIVCRGGGSIEDLWAFNDESLARAIASSTLPIVSGVGHETDFT 251 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPT AAE+ + L L + A L R+++ + L+ L + L Sbjct: 252 IADFAADVRAPTPTAAAELVSAQRTMLLRELDHRHAALARGFGRMMERRAQQLDWLARRL 311 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + ++ R H + R+ S ++ R + Sbjct: 312 VSPSERIARQRQ----------------------HLRQLSLRLCSAG-ARPVRDARARLT 348 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + R ++ L ++ ++ + H Sbjct: 349 MVQLRWRRSQPDTERAAERVQR--------LGQRLRDALHRQHE---------------- 384 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQ 493 VS + + + TL+RGY ++ D + + L R+ ++ G Sbjct: 385 --RRRAQVSELAARTELLSPRRTLERGYAALIDPHSGAAVRAPDALNPGGRVTVHLAHGS 442 Query: 494 ANAIVINKAP 503 A+ + + P Sbjct: 443 ADLGIAHVQP 452 >gi|170733904|ref|YP_001765851.1| exodeoxyribonuclease VII large subunit [Burkholderia cenocepacia MC0-3] gi|169817146|gb|ACA91729.1| exodeoxyribonuclease VII, large subunit [Burkholderia cenocepacia MC0-3] Length = 460 Score = 322 bits (825), Expect = 1e-85, Method: Composition-based stats. Identities = 134/506 (26%), Positives = 232/506 (45%), Gaps = 60/506 (11%) Query: 2 NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 +PFS + VS L+ + ++E + + + GE+S + +SGH YFS+KD Sbjct: 5 SPFSAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +++ ++++G EF P EG V +T + + Q+ +E++ +G G L A Sbjct: 64 QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 + K +L EGLF+ + K P+P P+ I ++TS A +RD+L ++ R P + VI++P Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +++ A+ N +E D++++ RGGGSIEDLW FNDE + RAIA Sbjct: 184 APVQGAGSAEKLVAAVATANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S +P++S +GHETD+T+AD+AADLRAPTPTGAAE+A P + L + + L + R Sbjct: 238 SELPVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLREVDERQRALARGMAR 297 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++ + L+ L + L + + L R + +L L + F R + Sbjct: 298 RLEQRAQQLDWLARRLVSPAERLQRQRTHVQQLAARLASAASRPVRDARARFALAQLRWQ 357 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + + R + Q + + + R Sbjct: 358 RARP--DPSQARHALAGLSQRLASAL-------------------------QRRHERDTA 390 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKR 477 + R L+ + + TL+RGY ++ D + Sbjct: 391 RVSACAAR----------------------LEVLSPQRTLERGYAALIDAQTGRAVRAPN 428 Query: 478 NLATKTRILINFFDGQANAIVINKAP 503 L + R+ ++ +G A+ + + P Sbjct: 429 ALKPQRRLTVHLAEGSADVSLADVQP 454 >gi|162447339|ref|YP_001620471.1| exodeoxyribonuclease VII large subunit [Acholeplasma laidlawii PG-8A] gi|254783684|sp|A9NFG5|EX7L_ACHLI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|161985446|gb|ABX81095.1| exodeoxyribonuclease VII large subunit [Acholeplasma laidlawii PG-8A] Length = 446 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 148/497 (29%), Positives = 223/497 (44%), Gaps = 62/497 (12%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + SVS L+ ++K +E++ L V ++GEIS + H SGH YFSLKD + I A++ Sbjct: 3 EQKYLSVSALTEYIKVKLENDNHLKRVFLKGEISNFTH-HGSGHLYFSLKDEDAAISAMM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +K + + F P+ G + LV G I+ + Y I I S+ G G L E+ +K Sbjct: 62 FKTYASTLSFKPKAGDKVLVEGYISLYKARGTYSISIFSMTLDGIGELFLKYEQNRKMFQ 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 E G F + K PIP PKIIAVITS TGAVI+DI IS R+ L ++ ++P+ VQG+ Sbjct: 122 ELGYFDESLKKPIPKFPKIIAVITSETGAVIQDIKTTISRRYLLAKIELYPILVQGEGSK 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I + ++N + D+IIL RGGGSIEDLW FN+ +V AI S IP+I+AI Sbjct: 182 DDIVKTLARVNRESQA------DVIILGRGGGSIEDLWSFNEAEVVVAIHQSKIPVITAI 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN-- 305 GHETD TL+DY +DLRAPTPT AAE+A P L + + + IK Sbjct: 236 GHETDTTLSDYVSDLRAPTPTAAAELATPNMADLIKEIKDKVQLSQYYMNERIKNYTALI 295 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + L ++D L +L + + + + R+ Sbjct: 296 LNLDERLELASPKSKLELEHKQIDNLTSKLTYFYKSKLTDNLNQVRLLSQRLT--SPDEK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I++ ++ I I + K+ Sbjct: 354 IERYKERIETLTSRINLLYKKQ-------------------------------------- 375 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + + LQ ++RG++ N IT + T + Sbjct: 376 ---------VDLKTYEYQSSLKQLQGLDPLRIMQRGFSLTT-KNQKVITSIEQINTNDEL 425 Query: 486 LINFFDGQANAIVINKA 502 I + DG A V++K Sbjct: 426 DIQYKDGTAKVKVLSKE 442 >gi|229823207|ref|ZP_04449276.1| hypothetical protein GCWU000282_00505 [Catonella morbi ATCC 51271] gi|229787373|gb|EEP23487.1| hypothetical protein GCWU000282_00505 [Catonella morbi ATCC 51271] Length = 467 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 148/507 (29%), Positives = 239/507 (47%), Gaps = 61/507 (12%) Query: 15 YSVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV L+ +LK V+ L V V GE+S +R +GH YFSLK+++ +I+ ++K Sbjct: 9 LSVKALTRYLKRKFDVDPYLQKVYVVGEVSNFRLR--TGHQYFSLKEDNVKINVTMFKQA 66 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F EEG++ L +G+++ + S YQ+ +ESL P G G+L ALE+ K KL + GL Sbjct: 67 FSKLPFKLEEGMKVLAVGRVSIYEPSGSYQLTLESLQPDGVGSLYLALEQLKAKLKQAGL 126 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 K P F P+ IAVITSP+GAVIRDI+ + R+P+ +V++FP +VQG E EI Sbjct: 127 LDLPKKQPRRF-PRRIAVITSPSGAVIRDIVTTLKRRYPIAQVVVFPTRVQGKEASGEIV 185 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A +L + D +ILARGGG+IEDLW FN+E++ +AI +P+I+AIGHET Sbjct: 186 AAFERLKAKQAA-----FDTVILARGGGAIEDLWPFNEEIVAQAILACPLPVITAIGHET 240 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T+AD DLRAPTPT AAEMA + L RL ++ I++K L Sbjct: 241 DTTIADLVGDLRAPTPTAAAEMAAEELSQVYLKLEESRTRLAQAMLSRIQHKQTQLRRYQ 300 Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + ++ ++D + L + + + + R+K+ + Sbjct: 301 EVYIFREPERLYQAYMQQVDLIKERLLRAQSSYLQGQAQGLALLSTRLKAQGPSGRLHLE 360 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + + + +++ + Q + Sbjct: 361 GERLARLRHQLQRAMAQTSQ---------------------------------------- 380 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 ++ +++L++++ L RGY I+D + + L I + Sbjct: 381 -------HYQGELARYSQLLEAYSPLKILARGYAIIEDKQ-EAVKSVQQLQVGQVIDLTL 432 Query: 490 FDGQANAIVINKAPPKEQPTKKCQLHN 516 DGQA A V + K + + Sbjct: 433 QDGQATAQVQTISAQKGKNHGNKKEKA 459 >gi|15618970|ref|NP_225256.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae CWL029] gi|15836593|ref|NP_301117.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae J138] gi|16753053|ref|NP_445326.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae AR39] gi|33242435|ref|NP_877376.1| exodeoxyribonuclease VII large subunit [Chlamydophila pneumoniae TW-183] gi|14194741|sp|Q9Z6J7|EX7L_CHLPN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|4377397|gb|AAD19199.1| Exodoxyribonuclease VII [Chlamydophila pneumoniae CWL029] gi|7189702|gb|AAF38586.1| exodeoxyribonuclease, large subunit [Chlamydophila pneumoniae AR39] gi|8979435|dbj|BAA99269.1| exodoxyribonuclease VII [Chlamydophila pneumoniae J138] gi|33236946|gb|AAP99033.1| exodeoxyribonuclease VII large chain [Chlamydophila pneumoniae TW-183] gi|269302862|gb|ACZ32962.1| exodeoxyribonuclease VII, large subunit [Chlamydophila pneumoniae LPCoLN] Length = 554 Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 155/555 (27%), Positives = 262/555 (47%), Gaps = 70/555 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + P +V+ L+ +K ++ESN + V+GE+S SGH YF +KD+ + ++ + Sbjct: 1 MSSPPQAVASLTERIKTLLESNFCQIIVKGELSNVSLQP-SGHLYFGIKDSQAFLNGAFF 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + P++G ++ GK+ + +YQI+ +L+ +G G LL E+ K++L Sbjct: 60 HFKSKYYDRKPKDGDAVIIHGKLAVYAPRGQYQIVAHALVYAGEGDLLQKFEETKRRLTA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EG F+ + K P+PF P+ I VITSPTGAVI+DIL+ +S R +++++PV VQG+ Sbjct: 120 EGYFATEKKKPLPFAPQCIGVITSPTGAVIQDILRVLSRRARNYKILVYPVTVQGNSAAH 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI+ AI +N D++I+ARGGGSIEDLW FN+E++V+AI S+IPI+SA+G Sbjct: 180 EISKAIEVMNA------ENLADVLIIARGGGSIEDLWAFNEEILVKAIHASTIPIVSAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL D+A+D+RAPTP+ AAE+ E L + +L+ K L Sbjct: 234 HETDYTLCDFASDVRAPTPSAAAEIVCKSSEEQVQVFEGYLRHLLSHSRQLLTSKKQQLL 293 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH---- 364 + L ++ + ++ +LD + ++ ++ I + +++I ++ D + Sbjct: 294 PWRRFLDRAE-FYTTAQQQLDSIEIAIQKGVQGKIHESKQRYDNISRWLQGDLVSRMTCR 352 Query: 365 ----------------------------------NIQKNRQHILEKQQHIEQIVKQHLRY 390 IQ+ Q + +Q ++ ++ + L Y Sbjct: 353 LQSLKKMLSQALSHKALSLQVRCHQLKKSLTYPRQIQQASQKLSPWRQQLDTLISRRLHY 412 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--------------------- 429 E K L + ++ ++ L R+ Sbjct: 413 QKEEYFHKHTRLKHAHNVLEQQLRSHVQKLELLGRRLSRGCELNLQNQKIAYANVKETLA 472 Query: 430 -ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILI 487 IL + ++ S L S KN LKRGY + D N N+ + +L R+ I Sbjct: 473 TILERRYENSVARYSALKEQLHSLNPKNVLKRGYAMLFDFNENSAMISVDSLQENARVRI 532 Query: 488 NFFDGQANAIVINKA 502 DG+A V N Sbjct: 533 QLQDGEAILTVTNIE 547 >gi|224476634|ref|YP_002634240.1| exodeoxyribonuclease VII large subunit [Staphylococcus carnosus subsp. carnosus TM300] gi|254783709|sp|B9DNP9|EX7L_STACT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|222421241|emb|CAL28055.1| putative exonuclease VII, large subunit [Staphylococcus carnosus subsp. carnosus TM300] Length = 446 Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats. Identities = 153/492 (31%), Positives = 237/492 (48%), Gaps = 61/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ ++K+ + + L V ++GE+S ++ HSSGH YF+LKDN+S ++A+++K Sbjct: 5 LSVTALTKYIKYKFDQDPHLQSVLLKGELSNFK-KHSSGHLYFNLKDNNSVVNAMMFKAQ 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 NK++F P+EG E L+ +++ + YQI + + G G L LE KK+L ++GL Sbjct: 64 ANKLDFNPKEGDEVLIEARVSVYERQGNYQIYVNKMHLDGIGNLYQKLEALKKELKKQGL 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK IP PK IAV+T+ TGA IRDI I+ R+P + I VQG + +I Sbjct: 124 FDTKHKKEIPRFPKKIAVLTASTGAAIRDIYSTINSRYPLVEQIQISTLVQGKQAKDDIV 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 N I +TL D++I+ RGGGSIEDLW+FN+E +VRAI + P+ISA+GHET Sbjct: 184 NKIKYADTL-------DADVMIVGRGGGSIEDLWNFNEEEVVRAIFEAKTPVISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL+D+ AD+RA TPT AA +A P + L + E L+ II++I K L + Sbjct: 237 DFTLSDFVADVRAATPTQAAVIATPDQVELSQYIKQTELNLSRHIIQIINNKKKHLEHVA 296 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + D R+L ++ + + + NRI L + Sbjct: 297 SYYKFKQPSLLYDQQIQKKDDFERQLNLSITTKLNNALQKVELLTNRINLKDLKQQTLQG 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 Q L+ + + + I R+ Sbjct: 357 IQSRLQLHDSLNKSIINI--------------------------------IDNSKKRLSQ 384 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + + L S + NT+ RGYT + + N IT ++L I + Sbjct: 385 RIEN---------------LNSLSPSNTMLRGYTIV-NKNEQVITSTQSLEKNDEINLQM 428 Query: 490 FDGQANAIVINK 501 DG +AIV Sbjct: 429 KDGTVDAIVKKV 440 >gi|303326972|ref|ZP_07357414.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. 3_1_syn3] gi|302862960|gb|EFL85892.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. 3_1_syn3] Length = 496 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 125/516 (24%), Positives = 223/516 (43%), Gaps = 52/516 (10%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V L+ L+ +E V VRGE+S SGH YFSLKD +++ + ++G Sbjct: 5 ILTVRALTEQLRRSLEGRFPFVWVRGEVSNL-SRPGSGHIYFSLKDQDAQLQCVWFRGQQ 63 Query: 74 NKI----EFLP-----------------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 + F P G++ L G+I+ + +YQ+++E + P+G Sbjct: 64 RQAEQGQAFDPLTGEVFDTPRPSPLELLRNGLDLLCAGRISVYAPRGQYQLLVELVQPTG 123 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FP 171 G L A E+RK+KL E G F+ + K P+P+ P+ +A+ITSP+GA I D L+ R Sbjct: 124 QGLLAQAFEERKRKLAEAGYFTQERKRPLPWNPQRVALITSPSGAAIHDFLELAQNRGCG 183 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 + +FP VQG+E EI A+ ++N + +I+L RGGGS+EDLW FN+E Sbjct: 184 AEIRLFPASVQGEEAAPEIIRALDEINAQGWAQ------VIVLIRGGGSLEDLWAFNEEA 237 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + A+ +S +P+++ +GHE D TLAD ADLRA TP+ AA++ P++ L+ L A Sbjct: 238 VAEAVFHSRLPVLAGVGHEVDVTLADLTADLRAATPSHAAQLLWPLRAELRQRLDEACAA 297 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 L ++ R R + L + + + + Sbjct: 298 LRRAAAGRLERAE-----------------LLLRERENALRWFSPARHQARLSEQVARLS 340 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + ++ + E+ + + + + + + + Sbjct: 341 -----LALQRAVRQWFADKGRVWERLELARRAALTPEKLDVRQAHLALLHAALGMALPR- 394 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 R+ + R+ + +++ + L + L RGY ++ + Sbjct: 395 RLSDAEHMLALAGNRLRAVSDAWLENRSRRLESLEAALAANDPSAPLHRGYALVRTARGD 454 Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 + A I + DG+ A+V + +P + Q Sbjct: 455 ILRSVGQTAPGRDIEVRLADGRLAAVVRSVSPEEAQ 490 >gi|311107321|ref|YP_003980174.1| exodeoxyribonuclease VII large subunit [Achromobacter xylosoxidans A8] gi|310762010|gb|ADP17459.1| exodeoxyribonuclease VII, large subunit [Achromobacter xylosoxidans A8] Length = 473 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 134/513 (26%), Positives = 228/513 (44%), Gaps = 62/513 (12%) Query: 2 NPFSQKNSLDHPEY-----SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFS 56 +P + ++++ + + +V++L+ + ++E ++ + VRGEIS + +SGH YF+ Sbjct: 17 SPMTIESTVTNNVFARDILTVAQLNQAVGQLLERSIPALWVRGEISNFTA-AASGHWYFT 75 Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 LKD+ + + A++++ + + F P G + + +++ + YQ+ +++ +G G L Sbjct: 76 LKDSRASVRAVMFRSRASAVGFTPRAGDQVEIRARVSLYEPRGDYQLQADAMRRAGLGNL 135 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 A + K++L EGLF K +P+ I VITS A +RD+L ++ R P + VI Sbjct: 136 YEAFLRLKEQLASEGLFDPARKREPVGLPRAIGVITSLHAAALRDVLSALARRAPQVPVI 195 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 I+P VQG + +A + N E D ++L RGGGSIEDLW FNDE + R Sbjct: 196 IYPAPVQGADAAGRLAAQVRTANQRAE------VDTLLLVRGGGSIEDLWSFNDEALARE 249 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +A S IP+IS +GHETD+T+AD+ AD+RAPTPT AAE+A + L ++ + Sbjct: 250 VAASEIPVISGVGHETDFTIADFVADVRAPTPTAAAELACVPRSELLGRVMQAAEAMTRG 309 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R ++ L+ L + Q L R RL+ L L R+ N + Sbjct: 310 QQRRLERAAQRLDRAAAQLVSPAQRLEHQRERLNSLRFRLATAWSGPQERRAARVNLLTQ 369 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R+ H + + Q+ + H R + + Sbjct: 370 RL-----AHRVPDTGRAADRLAGAARQLGQAHARLLVQRRNR------------------ 406 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 ++ T L++ NTL RGY +D + Sbjct: 407 --------------------------LAAATAQLRALDPGNTLARGYAIARDEQGRIVRD 440 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 LA + ++F G A V +E Sbjct: 441 AAALAAGQALDLSFAHGGAEVAVTRTRDSREAS 473 >gi|189218808|ref|YP_001939449.1| Exonuclease VII, large subunit [Methylacidiphilum infernorum V4] gi|189185666|gb|ACD82851.1| Exonuclease VII, large subunit [Methylacidiphilum infernorum V4] Length = 452 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 131/498 (26%), Positives = 217/498 (43%), Gaps = 77/498 (15%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L+ ++ ++E N+ V V GE+S R I SSGH YF+LKD + I+A+ ++ Sbjct: 26 PWTVSGLTKKIRFLLEGNIGEVWVIGEVSNLR-IPSSGHCYFTLKDETAVINAVFFRTEA 84 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K++F ++G+ +V +T + +YQ+ + G+G+LL E+ K+KL +EGLF Sbjct: 85 EKLDFPLKDGLSIVVRAFLTVYESRGQYQLRVVEARKKGAGSLLEKFEELKRKLAQEGLF 144 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P P+ I ++TS GAVI+D + + R P + + I V+VQG+ +EIA Sbjct: 145 DLSRKKKLPLFPEKIGIVTSLKGAVIQDFSRILQRRAPGITIYIRDVRVQGNGAAQEIAK 204 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI E DI+++ARGGGS+EDLW FN+E++ RA+ IP +SA+GHETD Sbjct: 205 AIE------EFGELGLVDILVVARGGGSLEDLWAFNEEIVARALFRCPIPTVSAVGHETD 258 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD AD+RAPTP+ AAE+ E Sbjct: 259 FTIADLVADVRAPTPSAAAEIVSRDWEEW------------------------------- 287 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 R L+ L + + I + RQ+ Sbjct: 288 ------------RQELEHLELRMHRFSLQYLEIWKERLEKIKKSSSLAEPSRYVGLLRQN 335 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-IL 431 +Q +E+ V + T +L R++ Sbjct: 336 ADMLEQALEKAVSLA-------------------------LERARTKYTELELRLKSFNP 370 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ + + L S + + L RGY+ D + + ++ +I++ Sbjct: 371 QLVLERVREELKLWAARLASVSPQVVLDRGYSMTFDRQGRVLKEAEKVSRGEQIVVVLSK 430 Query: 492 GQANAIVINKAPPKEQPT 509 G A V KE+ + Sbjct: 431 GSLWAAVEKTQQEKERSS 448 >gi|330818108|ref|YP_004361813.1| Exodeoxyribonuclease VII large subunit [Burkholderia gladioli BSR3] gi|327370501|gb|AEA61857.1| Exodeoxyribonuclease VII large subunit [Burkholderia gladioli BSR3] Length = 460 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 132/503 (26%), Positives = 221/503 (43%), Gaps = 58/503 (11%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + VS L+ + ++E V GE+S + +SGH YFS+KD + Sbjct: 8 PGPGGANAGDGVIPVSALNRAIGSMLERAFPLCWVSGEVSNFT-RAASGHWYFSIKDKDA 66 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ ++++G F P EG V +T + + Q+ +E++ +G G L A + Sbjct: 67 QMRCVMFRGRAQHAPFTPREGDRIEVRALVTMYEPRGEVQLSVEAVRRTGQGKLFEAFLR 126 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K +L EGLF+ + K +P P+ I ++TS A +RD+L ++ R P L VI++P V Sbjct: 127 LKAELEAEGLFAAERKRALPAFPRAIGIVTSLQAAALRDVLSTLARRAPHLPVIVYPAPV 186 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +++ + N +E D++I+ RGGGSIEDLW FNDE + RAIA S + Sbjct: 187 QGAGAAEKLTAMVQTANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEL 240 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++S +GHETD+T+AD+AADLRAPTPTGAAE+ P + L L +A L + R ++ Sbjct: 241 PVVSGVGHETDFTIADFAADLRAPTPTGAAELVSPQRALLLRELGERQAELRRGLRRGLE 300 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L+ L + L + + L+ R L +L L + F + ++ Sbjct: 301 ARAQQLDWLARRLVSPAERLARQRTHLQQLAVRLASAGARPVRDARARFALV--MLRWQR 358 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 ++ R + Q + ++ A L Sbjct: 359 TRPDVAAARLSVTGWSQRLGVALRHRHERAAARVAGCAARL------------------- 399 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLA 480 + + + TL+RGY I + L Sbjct: 400 ----------------------------EVLSPQRTLERGYAALIDTQTGRAVRAPGALK 431 Query: 481 TKTRILINFFDGQANAIVINKAP 503 + R+ + +G A+ + + P Sbjct: 432 PQRRLTVRLAEGSADVSLADVQP 454 >gi|241663982|ref|YP_002982342.1| exodeoxyribonuclease VII large subunit [Ralstonia pickettii 12D] gi|240866009|gb|ACS63670.1| exodeoxyribonuclease VII, large subunit [Ralstonia pickettii 12D] Length = 467 Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 136/492 (27%), Positives = 213/492 (43%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSE++ + ++E N VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 29 VLTVSEVNRRIAGLLERNFPLGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 87 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V +T + + Q+ +E++ +G G L A + K L GLF Sbjct: 88 QYADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEARGLF 147 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K P+P P+ I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 148 DADRKRPLPRHPRAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGASERIAA 207 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + ++N E D++IL RGGGSIEDLW FN+E + RA+A SSIPI++ +GHETD Sbjct: 208 MLERVNARAE------VDVVILCRGGGSIEDLWAFNEEPVARAVAASSIPIVAGVGHETD 261 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ D+ AD+RAPTPT AAE+ P + + + L+ R + + T++ L + Sbjct: 262 VTIVDFVADVRAPTPTAAAELVSPDRARMLRDVGRDWDALSAQFRRQLDRRAQTVDWLAR 321 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + R +L L L L + R L + R Sbjct: 322 RLRSPQAQMRERRTQLAHLEGRLRFALTGRVQR---------AEHLQRLLTMRLNAARPD 372 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 ++ ++Q R + Sbjct: 373 ATRERTRLQQAEATLARAMRDTLSR----------------------------------- 397 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ L+ A + TL+RGY + D + I L +T I G Sbjct: 398 -----AQERLARQHTGLELLAPQRTLERGYAVLLDDKGHAIRDPNALHARTHIEARLAQG 452 Query: 493 QANAIVINKAPP 504 A+ + P Sbjct: 453 TADIEIARVQPK 464 >gi|300690602|ref|YP_003751597.1| exonuclease VII, large subunit [Ralstonia solanacearum PSI07] gi|299077662|emb|CBJ50298.1| exonuclease VII, large subunit [Ralstonia solanacearum PSI07] Length = 468 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 134/491 (27%), Positives = 211/491 (42%), Gaps = 55/491 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ + ++E + + VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 29 VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 87 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V IT + + Q+ +E++ +G G L A + K L +GLF Sbjct: 88 QYADFTPREGEAVEVRALITLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 147 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193 K P+P P I V+TS A +RD+L + R P ++ E A Sbjct: 148 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLHRRAPHVPVVVYPVPVQGVGAAERIAA 207 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + L D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD Sbjct: 208 M-----LDTVNARAEVDVIILCRGGGSIEDLWAFNEEPVARAVAASDIPIVAGVGHETDV 262 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ AD+RAPTPTGAAE+ P + + + + L+ + R + + T++ L + Sbjct: 263 TIVDFVADVRAPTPTGAAELVSPDRARMLRDVASSWDALSATLRRQLDRRAQTVDWLARR 322 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + R RL L L L + R + R+ + +I + R + Sbjct: 323 LRSPQAQMRERRTRLAHLEGRLRFALHGRVQRAEHVQRLLAMRLDAARP--DIARERTAL 380 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + + + + H + + TR+ Sbjct: 381 QAIEAALARAM--------------------------------HATLDRAQTRLSRH--- 405 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 L+ A + TL+RGY + D + I L + RI G Sbjct: 406 ------------QAGLELLAPQRTLERGYAVLLDAKGHAIRDPSALHARARIEARLARGA 453 Query: 494 ANAIVINKAPP 504 + + P Sbjct: 454 VDIEIAQVQPK 464 >gi|28199769|ref|NP_780083.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa Temecula1] gi|182682519|ref|YP_001830679.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa M23] gi|31563067|sp|Q87AC5|EX7L_XYLFT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226697623|sp|B2I9F0|EX7L_XYLF2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|28057890|gb|AAO29732.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa Temecula1] gi|182632629|gb|ACB93405.1| exodeoxyribonuclease VII, large subunit [Xylella fastidiosa M23] gi|307578797|gb|ADN62766.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa subsp. fastidiosa GB514] Length = 444 Score = 320 bits (821), Expect = 3e-85, Method: Composition-based stats. Identities = 147/489 (30%), Positives = 226/489 (46%), Gaps = 60/489 (12%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + S+L+ + ++ES V + GE+ SSGH Y +LKD +++ ++K Sbjct: 7 ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P EG+ L G++T + YQI+++ L SG G L A E+ + +L EGLF Sbjct: 66 QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEESGEGALRRAFEQLRIRLEAEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P P+ IAVITSP+GAVIRDIL + RFP + + + P VQGD +I Sbjct: 126 DPARKQPLPVHPRRIAVITSPSGAVIRDILSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + L + R D I++ARGGGS+EDLW FN+E + R IA + P+ISAIGHETD Sbjct: 184 ----THLLGGADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+AAD+RAPTP+ AAE+ VP + L+ L L+ RL ++ + I + L Sbjct: 240 FTLADFAADIRAPTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 299 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L N + L R R L+ L ++ R + R+ + R Sbjct: 300 RLQARNPEMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 352 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q I Q+H++ + Q L++++ Sbjct: 353 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 380 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489 + R L++ T+ RGY ++ +NN + + + Sbjct: 381 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 430 Query: 490 FDGQANAIV 498 GQ V Sbjct: 431 AHGQLRVRV 439 >gi|29840072|ref|NP_829178.1| exodeoxyribonuclease VII large subunit [Chlamydophila caviae GPIC] gi|33301063|sp|Q823U8|EX7L_CHLCV RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|29834420|gb|AAP05056.1| exodeoxyribonuclease, large subunit [Chlamydophila caviae GPIC] Length = 555 Score = 320 bits (821), Expect = 3e-85, Method: Composition-based stats. Identities = 170/555 (30%), Positives = 263/555 (47%), Gaps = 69/555 (12%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + P +V+ L+ +K+++ESN H+ V+GE+S SGH YF +KDN S ++ Sbjct: 2 TTSSPPQAVTTLTESIKNLLESNFCHIVVKGELSNVSLQP-SGHLYFGIKDNRSFLNGAF 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + P++G ++ GK+T + +YQII +L+ +G G LL E+ KK+L Sbjct: 61 FHFKSKYFDRRPKDGDSVVIHGKLTVYAPRGQYQIIAHALVYAGEGDLLQKFEETKKRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187 EG F+ + K +P IPK I VITSPTGAVI+DIL+ +S R + +++I+PV VQG Sbjct: 121 AEGYFAIEKKQALPTIPKSIGVITSPTGAVIQDILRVLSRRCYQYKLLIYPVTVQGATAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 KEI+ AI ++N D++ILARGGGSIEDLW FN+E+IV+AIA SSIPIISA+ Sbjct: 181 KEISRAIEEMNK------ENLADVLILARGGGSIEDLWAFNEEIIVKAIAASSIPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+TL D+AAD+RAPTP+ AAE+ E L + LN +L+ K + Sbjct: 235 GHETDYTLCDFAADVRAPTPSAAAEIVCQSSEQQIQVLKSYLRYLNAHAQQLLSGKTKQI 294 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--- 364 + L + D + LD L +E +++I + + + + ++SD L Sbjct: 295 QQWKRYLDHVD-FFRPAHQSLDYLCLSIERSIKIKLSQYKQRYMQYARWLQSDVLQRMTY 353 Query: 365 ----------------------------------NIQKNRQHILEKQQHIEQIVKQHLRY 390 N Q+ Q + +Q + ++Q L Y Sbjct: 354 RLYDLWKMIVQAFHNRLIAAKHLCIHQKKNLTFLNTQQFIQKLDLWKQQTRRALRQRLGY 413 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--------------------- 429 + L + + + + L R+ Sbjct: 414 CSQSLTHQQTSLKHFITKLNQQFTKENHALSLLQKRLTRTFANRVDEHRESYMRSRENLI 473 Query: 430 -ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILI 487 L H +K S ++ L KN KRGY + D N N I ++L + + + Sbjct: 474 FSLHHLVKRNREKYSQVSKQLTLLNPKNVFKRGYAMLFDFNENFAIISAKSLHKHSCVRV 533 Query: 488 NFFDGQANAIVINKA 502 DG+A V + Sbjct: 534 RLQDGEATLTVTDIQ 548 >gi|15837357|ref|NP_298045.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa 9a5c] gi|14194731|sp|Q9PFC3|EX7L_XYLFA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|9105645|gb|AAF83565.1|AE003916_19 exodeoxyribonuclease VII large subunit [Xylella fastidiosa 9a5c] Length = 444 Score = 320 bits (821), Expect = 3e-85, Method: Composition-based stats. Identities = 147/489 (30%), Positives = 225/489 (46%), Gaps = 60/489 (12%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + S+L+ + ++ES V + GE+ SSGH Y +LKD +++ ++K Sbjct: 7 ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P EG+ L G++T + YQI+++ L +G G L A E+ + +L EGLF Sbjct: 66 QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P P+ IAVITSP+GAVIRDI + RFP + + + P VQGD +I Sbjct: 126 DPARKQPLPVHPRRIAVITSPSGAVIRDIFSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + L+ + R D I++ARGGGS+EDLW FN+E + R IA + P+ISAIGHETD Sbjct: 184 ----THLLRCADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+AAD+RAPTP+ AAE+ VP + L+ L L+ RL ++ + I + L Sbjct: 240 FTLADFAADIRAPTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 299 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L N + L R R LE L ++ R + R+ + R Sbjct: 300 RLQARNPEMHLRLLAQRQAEAGRRLEQCLHHVLDRAQGQLRNHHTRLYALNP-------R 352 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q I QQH++ + Q L++++ Sbjct: 353 QQIAGLQQHLKHLNPQQPLQRRLQQEQL-------------------------------- 380 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489 + R L++ T+ RGY + +NN + + + Sbjct: 381 ----------RLHGLVRALEAVNPLATVARGYALVHRADNNTLVRDSAQVCVGDVLDTKL 430 Query: 490 FDGQANAIV 498 GQ V Sbjct: 431 AHGQLRVRV 439 >gi|254467863|ref|ZP_05081269.1| exodeoxyribonuclease VII, large subunit [beta proteobacterium KB13] gi|207086673|gb|EDZ63956.1| exodeoxyribonuclease VII, large subunit [beta proteobacterium KB13] Length = 449 Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats. Identities = 143/502 (28%), Positives = 228/502 (45%), Gaps = 62/502 (12%) Query: 4 FSQKNSLD----HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 S N + + +SE++ +K+I+ ++L V + GE+S + SSGH YFSLKD Sbjct: 1 MSSNNLTNLVDAEKVFEISEINRIVKNILLNHLEKVWIGGEVSNFVE-ASSGHWYFSLKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + ++I ++KG + P+ G + G I+ + YQI IE + G+G L Sbjct: 60 SSAQIRCTMFKGYNHLSSITPKNGDQIEAFGAISLYEARGDYQINIEQVREKGTGNLFEK 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178 + K KL + GLF++++K P+P PK I VITS +GA +RD+L ++ + +V+I+P Sbjct: 120 FVQLKDKLEKLGLFNEENKLPVPAYPKNIGVITSASGAALRDVLSVLNKQQNFNQVVIYP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG E EI AI + N D++IL RGGGSIEDLW FN+E +V AIA Sbjct: 180 CSVQGKEAANEICAAISKAN------VQKMVDVLILCRGGGSIEDLWSFNEEKVVNAIAQ 233 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 S +PIIS +GHETD+TL D+ AD+RAPTPT AA + + L + L I Sbjct: 234 SKLPIISGVGHETDFTLTDFVADMRAPTPTAAASVILEKLNKLDEYFEYYLSALQKNISN 293 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 L+K K L+ L K + + L S+ + L ++ L+ F + + + Sbjct: 294 LLKSKNQELDFLEKRIVSPKDKLKRSKELIHNLKKQFTTTLKNKFFNAEKEIDIL----- 348 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 R+ Q+ I++ + RI Sbjct: 349 -----------RKRFTSPQEKIQRA--------------------------EERIKNTEK 371 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + R +IK + ++ L +N L +GY+ + + + + Sbjct: 372 DLNYTALR-------RIKEQQSKINFIDEKLNILNPRNILAKGYSIVYNGLD-VVKDSNK 423 Query: 479 LATKTRILINFFDGQANAIVIN 500 + + I G V N Sbjct: 424 VDLNDNLDIQLHSGTLLVQVKN 445 >gi|313638047|gb|EFS03325.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri FSL S4-171] Length = 451 Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats. Identities = 146/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQGD+ ++ Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQK 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL +L++ K L Sbjct: 239 ETDFALSDFSADIRAATPTAAAELAVPDYRDLEERLAERKYRLLAGTRQLLERKERRLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + K FN + +R+ I Sbjct: 299 LKQHLILNGPKHQLEQQIERTDYFSERLNSAFAKQLLLKQTTFNRLNDRLNYYHPKKEID 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ +L ++ +++ +K ++ K L +R+ Sbjct: 359 FQQEQLLLRKSALDKAMK---------QQLKDKQLSFIRQ-------------------- 389 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + LA I + Sbjct: 390 ------------------VEALEHLSPLSLLKRGFGVTY-KENKLVKSVNQLAVGDNIQV 430 Query: 488 NFFDGQANAIVINKA 502 GQ +A++ K Sbjct: 431 KMQGGQIDALITAKE 445 >gi|301300971|ref|ZP_07207136.1| exodeoxyribonuclease VII, large subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300214351|gb|ADJ78767.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) [Lactobacillus salivarius CECT 5713] gi|300851438|gb|EFK79157.1| exodeoxyribonuclease VII, large subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 446 Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats. Identities = 145/502 (28%), Positives = 238/502 (47%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS L+ +L + L V + GEIS +R + H YFSLKD+++ I + Sbjct: 1 MSKEYLTVSALTKYLHTKFTRDPYLRRVYLTGEISNFRRRAT--HQYFSLKDDNAVISVM 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +KI+F PEEG++ LV G++ + S +YQIII+++ P G G L A E+ KKL Sbjct: 59 MFQSAFSKIKFEPEEGMKVLVSGRVDLYEKSGRYQIIIDTMQPDGVGALYQAYEQLVKKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+++ K P+ PK IAVITSP+GAVIRDI+ R+P+ ++++FP VQGD+ Sbjct: 119 RIEGLFNEELKKPLVKYPKRIAVITSPSGAVIRDIITTTRRRYPIAQLVLFPAVVQGDDA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + Q+N D II+ RGGGSIEDLW FN+E + RAI++S IP+IS+ Sbjct: 179 ADSLVGRLKQVN------EDGNFDTIIIGRGGGSIEDLWPFNEEKVARAISDSKIPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305 +GHETD T+AD AD+RA TPT AAE+A PV + R+ ++ I Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELATPVLSEEIVKIKQYRLRIIQVLKNKIYNYQQI 292 Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L D+ + LD L + ++++ + + + ++ + Sbjct: 293 LDKVCSSYILQQPDRLYTGYAQNLDSLINRKNQAFKNLVYQNEKQLQLLESNLQHNNPSI 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ + ++ Q + + + + +F +K K+ Sbjct: 353 RIKDEKNNL----QQLLEKMHLGMLGVFNDKSYKL------------------------- 383 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + RGY+ I + + ++L Sbjct: 384 ------------------EKLMSSLDMLSPLKVMNRGYSYIL-KDGKTVKNVKSLQPNDD 424 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + + F +G A A + KE Sbjct: 425 VTLYFENGSAEARITKIREEKE 446 >gi|313619079|gb|EFR90885.1| exodeoxyribonuclease VII, large subunit [Listeria innocua FSL S4-378] Length = 451 Score = 320 bits (820), Expect = 4e-85, Method: Composition-based stats. Identities = 142/495 (28%), Positives = 236/495 (47%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQGD+ + Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQR 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + +L++ K L Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQLLERKERALEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L++ + K FN + +R+ I Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFAERLKNAFSKQVLLKQTTFNRLNDRLHYYHPKKEIA 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ I ++Q +++ +K Sbjct: 359 LQKEQITLRKQALDKAMK------------------------------------------ 376 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 ++K + L+ + LKRG+ + + L I + Sbjct: 377 -----QQLKDNQQAFIRQVEALEHLSPLALLKRGFGVTYKA-GELVKTVQELEIGDNIQV 430 Query: 488 NFFDGQANAIVINKA 502 G +A + K Sbjct: 431 KMQGGHIDAHITAKE 445 >gi|309775472|ref|ZP_07670474.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308916768|gb|EFP62506.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 442 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 124/496 (25%), Positives = 222/496 (44%), Gaps = 59/496 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + YSVS L +++K +++++ + ++GEIS + H SGH YF+LKD ++I + Sbjct: 1 MSQSVYSVSSLVHYIKQSLDNDIRIQSILIKGEISNFTN-HRSGHWYFTLKDTRAKISCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + + +EG++ +V ++ + Q+ + + G G L LE+ K+KL Sbjct: 60 MFSSHARRCRIVLKEGMKVIVTASVSMYEAGGSVQLYVTGVQADGLGDLFLQLEEVKRKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF K +P P I VIT+ +GA ++DIL IS R+PL V ++P VQG + Sbjct: 120 AAEGLFDPNKKKALPQYPMSIGVITAKSGAAVQDILTTISRRWPLAEVKVYPSLVQGIQA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I + + C D+++LARGGG+IEDLW FN+E + RA+ S I++ Sbjct: 180 SEAIVKNLALAD-------CGNHDVVLLARGGGAIEDLWCFNEETVARAVYAMSSVIVTG 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL DY +D RAPTPT AAE+ P E ++ + L R+ + ++ Sbjct: 233 VGHETDTTLVDYVSDARAPTPTAAAELITPDLEEVRMHVALLRRRMIKDMETRLQLARQA 292 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + RY D E +++ + + L + Sbjct: 293 LEPVK-----------QHRYMKDPQSYIREEEMKLAMHVRRLGVVEAQ----VAALAMRL 337 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++N Q + + + QI +++ L R Sbjct: 338 KQNSQQLAIHSERLYQINARNVEQSRL--------------------------------R 365 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ L + + + +L +++ +L RGY + I+ ++ + Sbjct: 366 LQNALHNYDMQRKRQMRNVSALLDAYSPLKSLSRGYAIAYHED-AVISSIGDVEVNDTLR 424 Query: 487 INFFDGQANAIVINKA 502 + DG + ++ K Sbjct: 425 LRLQDGYIDTVIEKKE 440 >gi|17547246|ref|NP_520648.1| exodeoxyribonuclease VII large subunit [Ralstonia solanacearum GMI1000] gi|22095664|sp|Q8XWE7|EX7L_RALSO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|17429548|emb|CAD16234.1| probable exodeoxyribonuclease vII large subunit (exonuclease vII large subunit) protein [Ralstonia solanacearum GMI1000] Length = 440 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 138/494 (27%), Positives = 219/494 (44%), Gaps = 57/494 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSE++ + ++E + + VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 2 LSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRNQ 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 61 YADFTPREGEAIEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 K P+P P I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 121 AARKRPLPRHPHAIGVVTSLQAAALRDVLTTLHRRAPHVPVVVYPVPVQGAGAAERIAAM 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + +N E D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD Sbjct: 181 LDLVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDIPIVAGVGHETDV 234 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ AD+RAPTPTGAAE+ P + + + L+ + R + + T++ L + Sbjct: 235 TIVDFVADVRAPTPTGAAELVSPDRARMLRDVAGCWDALSATLRRQLDRRAQTVDWLARR 294 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + R L L L L + R + R+ + +I + R + Sbjct: 295 LRSPQAQMRERRAGLAHLEGRLRFALHGRVQRAEHGQRLLAMRLDAARP--DIARERTAL 352 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + + + + + + TR+ Sbjct: 353 QGIEAALARAM--------------------------------RATLDRAQTRL------ 374 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 S L+ A + TL+RGY + D I L + RI G Sbjct: 375 ---------SHHQAGLELLAPQRTLERGYAVLLDAKGQAIRDPAALHARARIEARLARGA 425 Query: 494 ANAIVINKAPPKEQ 507 + + P + Sbjct: 426 VDIEIAQVQPKLPE 439 >gi|116872792|ref|YP_849573.1| exodeoxyribonuclease VII large subunit [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466251|sp|A0AIG2|EX7L_LISW6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|116741670|emb|CAK20794.1| exodeoxyribonuclease VII, large subunit [Listeria welshimeri serovar 6b str. SLCC5334] Length = 450 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 143/495 (28%), Positives = 238/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ ++ K V+ + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 5 KYLTVAAITKYIEKKFDVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKTQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKSAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + +L++ K TL Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLTVTRQLLERKERTLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L++ + K FN + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQIERTDYFSERLKNAFSKQVLLKQTMFNRLNDRLHYYHPRKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + ++Q +E+ +K+ L+ Sbjct: 358 LQNEQLAVRKQALEKAMKRQLKDKQQV--------------------------------- 384 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + LKRG+ + ++L I + Sbjct: 385 --------------FVRQIEALEHLSPLALLKRGFGVTY-KEGQLVKSVQDLEVGDDIQV 429 Query: 488 NFFDGQANAIVINKA 502 G A + K Sbjct: 430 KMQGGHIEASITAKE 444 >gi|239631999|ref|ZP_04675030.1| exodeoxyribonuclease 7 large subunit [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066684|ref|YP_003788707.1| exonuclease VII large subunit [Lactobacillus casei str. Zhang] gi|239526464|gb|EEQ65465.1| exodeoxyribonuclease 7 large subunit [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439091|gb|ADK18857.1| Exonuclease VII, large subunit [Lactobacillus casei str. Zhang] Length = 449 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 133/497 (26%), Positives = 230/497 (46%), Gaps = 62/497 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK +++ L+ V + GEIS YR G+ YFSLKD+H++I A+++ Sbjct: 5 SQYLSVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALMF 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + +K++F EEG++ LV+G+++ + S +Y++I+E L P G G L A E+ KKKL Sbjct: 63 RNAFSKVQFDLEEGMKVLVVGRVSLYEPSGEYRLIVEHLEPDGVGALYQAFEQLKKKLSA 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF + P+P PK +AV+TSP+GAVI+DI+ ++ R+P+ ++ +FP VQGD+ Sbjct: 123 EGLFDRN-QRPLPLFPKRVAVVTSPSGAVIQDIMTTVARRYPILQLTLFPAVVQGDQAAD 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + L + + D +I+ RGGGSIEDLW FN+E + RA+ + +P++S++G Sbjct: 182 SLVK------RLNQIKAIGGFDAVIIGRGGGSIEDLWPFNEEKVARALVDMPMPVVSSVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKIN 305 HETD T+ D+ AD RA TPT AAE+ PV + S + Sbjct: 236 HETDTTITDFIADRRAATPTAAAEIVTPVTLIDALNRISEDRVRLVNAMHNRLKNAAIRV 295 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ L D+ R+D+ + L+ ++ + +++ L Sbjct: 296 QRSAQSVVLTQPDRLYDQYVQRVDQFQQRLQQSMHNRLREADHRLAMATSQLDGRQLFIR 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + ++Q ++ ++ Sbjct: 356 LVNLQRQVTGDRHRLDQAMRGLVKTK---------------------------------- 381 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + L + L RG+ + D + + I Sbjct: 382 -------------RQAFASAVSGLDHLSPLKILGRGFAYVTDEQGQMLKSLSDYELDQDI 428 Query: 486 LINFFDGQANAIVINKA 502 I+ DGQ A V K Sbjct: 429 HIHVADGQVGAHVTTKE 445 >gi|191638626|ref|YP_001987792.1| exodeoxyribonuclease VII large subunit [Lactobacillus casei BL23] gi|226697535|sp|B3WEY3|EX7L_LACCB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|190712928|emb|CAQ66934.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) [Lactobacillus casei BL23] gi|327382668|gb|AEA54144.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus casei LC2W] gi|327385862|gb|AEA57336.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus casei BD-II] Length = 449 Score = 320 bits (819), Expect = 5e-85, Method: Composition-based stats. Identities = 134/497 (26%), Positives = 231/497 (46%), Gaps = 62/497 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK +++ L+ V + GEIS YR G+ YFSLKD+H++I A+++ Sbjct: 5 SQYLSVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALMF 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + +K++F EEG++ LV+G+++ + S +Y++I+E L P G G L A E+ KKKL Sbjct: 63 RNAFSKVQFDLEEGMKVLVVGRVSLYEPSGEYRLIVEHLEPDGVGALYQAFEQLKKKLAA 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF + P+P PK +AV+TSP+GAVI+DI+ ++ R+P+ ++ +FP VQGD+ Sbjct: 123 EGLFDRN-QRPLPLFPKRVAVVTSPSGAVIQDIMTTVARRYPILQLTLFPAVVQGDQAAD 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + L + +T D +I+ RGGGSIEDLW FN+E + RA+ + +P++S++G Sbjct: 182 SLVK------RLNQIKTIGGFDAVIIGRGGGSIEDLWPFNEEKVARALVDMPMPVVSSVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKIN 305 HETD T+ D+ AD RA TPT AAE+ PV + S + Sbjct: 236 HETDTTITDFIADRRAATPTAAAEIVTPVTLIDALNRISEDRVRLVNAMHNRLKNAAIRV 295 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ L D+ R+D+ + L+ ++ + +++ L Sbjct: 296 QRSAQSVVLTQPDRLYDQYVQRVDQFQQRLQQSMHNRLREADHRLAMAASQLDGRQLFIR 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + ++Q ++ ++ Sbjct: 356 LVNLQRQVTGDRHRLDQAMRGLVKTK---------------------------------- 381 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + L + L RG+ + D + + I Sbjct: 382 -------------RQAFASAVSGLDHLSPLKILGRGFAYVTDEQGQMLKSLSDYELDQDI 428 Query: 486 LINFFDGQANAIVINKA 502 I+ DGQ A V K Sbjct: 429 HIHVADGQVGAHVTTKE 445 >gi|116495120|ref|YP_806854.1| exodeoxyribonuclease VII large subunit [Lactobacillus casei ATCC 334] gi|227534865|ref|ZP_03964914.1| exodeoxyribonuclease VII large subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|122263463|sp|Q038G0|EX7L_LACC3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|116105270|gb|ABJ70412.1| Exodeoxyribonuclease VII large subunit [Lactobacillus casei ATCC 334] gi|227187621|gb|EEI67688.1| exodeoxyribonuclease VII large subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 449 Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats. Identities = 134/497 (26%), Positives = 231/497 (46%), Gaps = 62/497 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK +++ L+ V + GEIS YR G+ YFSLKD+H++I A+++ Sbjct: 5 SQYLSVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALMF 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + +K++F EEG++ LV+G+++ + S +Y++I+E L P G G L A E+ KKKL Sbjct: 63 RNAFSKVQFDLEEGMKVLVVGRVSLYEPSGEYRLIVEHLEPDGVGALYQAFEQLKKKLAA 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EGLF + P+P PK +AV+TSP+GAVI+DI+ ++ R+P+ ++ +FP VQGD+ Sbjct: 123 EGLFDRN-QRPLPLFPKRVAVVTSPSGAVIQDIMTTVARRYPILQLTLFPAVVQGDQAAD 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + L + +T D +I+ RGGGSIEDLW FN+E + RA+ + +P++S++G Sbjct: 182 SLVK------RLNQIKTIGGFDAVIIGRGGGSIEDLWPFNEEKVARALVDMPMPVVSSVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKIN 305 HETD T+ D+ AD RA TPT AAE+ PV + S + Sbjct: 236 HETDTTITDFIADRRAATPTAAAEIVTPVTLIDALNRISEDRVRLVNAMHNRLKNAAIRV 295 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ L D+ R+D+ + L+ ++ + +++ L Sbjct: 296 QRSAQSVVLTQPDRLYDQYVQRVDQFQQRLQQSMHNRLRDADHRLAMATSQLDGRQLFIR 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++ + + ++Q ++ ++ Sbjct: 356 LVNLQRQVTGDRHRLDQAMRGLVKTK---------------------------------- 381 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + L + L RG+ + D + + I Sbjct: 382 -------------RQAFASAVSGLDHLSPLKILGRGFAYVTDKQGQMLKSLSDYELDQDI 428 Query: 486 LINFFDGQANAIVINKA 502 I+ DGQ A V K Sbjct: 429 HIHVADGQVGAHVTTKE 445 >gi|225873352|ref|YP_002754811.1| exodeoxyribonuclease VII, large subunit [Acidobacterium capsulatum ATCC 51196] gi|225793313|gb|ACO33403.1| exodeoxyribonuclease VII, large subunit [Acidobacterium capsulatum ATCC 51196] Length = 456 Score = 319 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 128/488 (26%), Positives = 222/488 (45%), Gaps = 57/488 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + + EL + +E + + V GEIS R SGH YF+LKD +++ A+ ++ Sbjct: 17 IWKIGELVTEARAQIERRFAELRVEGEISNLRAAP-SGHLYFTLKDGEAQLPAVFFRRQA 75 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + + F P++G++ L+ G++T + + Q++ E++ P G+G+L A E+ K KL GLF Sbjct: 76 SLLRFRPQDGMQVLLRGRLTIYEQRGQMQMVGETMEPLGAGSLQVAFEQLKAKLKARGLF 135 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 + K PIP P+ + ++TSPTGAVIRD L + R L+V+++P VQG+ E+A Sbjct: 136 DAERKRPIPAYPRCVGIVTSPTGAVIRDFLNIVQRRHAALQVLLYPATVQGEGAAAEVAA 195 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N +E D I++ARGGGS+EDL FN E + AIA S +P++SA+GHETD Sbjct: 196 GISYFNRTRE------VDAIVVARGGGSLEDLAPFNTEPLAEAIAASELPVVSAVGHETD 249 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSL 310 +T+AD+ ADLRAPTP+ AAE+ + ++ L L RL + + + + Sbjct: 250 FTIADFVADLRAPTPSAAAELITAAQHRVEEDLSALSQRLERAMRFRVMQARHGLDRVRV 309 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + L + ++D L E + + + + + ++H + R Sbjct: 310 EQMTVRMMDALHRRQQKIDELSASGELAMRGRLQQSRERLGLAQHALARQDVVHRLHPMR 369 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + ++ +E+ ++ R+ Sbjct: 370 ERLDRQRSALERA--------------------------------ARHYLSHRRERLH-- 395 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L++ + L+RGY + D + +L + Sbjct: 396 -------------GIEGKLRALSPMGVLERGYALVFDCQGRLVKSVDSLKPDEEMTTRLA 442 Query: 491 DGQANAIV 498 DG + V Sbjct: 443 DGNVTSTV 450 >gi|299065874|emb|CBJ37053.1| exonuclease VII, large subunit [Ralstonia solanacearum CMR15] Length = 440 Score = 319 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 138/494 (27%), Positives = 219/494 (44%), Gaps = 57/494 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSE++ + ++E + + VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 2 LSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRNQ 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 61 YADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 K P+P P I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 121 AARKRPLPRHPHAIGVVTSLQAAALRDVLTTLHRRAPHVPVVVYPVPVQGAGAAERIAAM 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + +N E D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD Sbjct: 181 LDLVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASGIPIVAGVGHETDV 234 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ AD+RAPTPTGAAE+ P + + + L+ + R + + T++ L + Sbjct: 235 TIVDFVADVRAPTPTGAAELVSPDRARMLRDVAGGWDALSATLRRQLDRRAQTVDWLARR 294 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + R L L L L + R + R+ + +I + R + Sbjct: 295 LRSPQAQMRERRAGLAHLEGRLRFALHGRVQRAEHGQRLLAMRLGAARP--DIARERTAL 352 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + + + + + + TR+ Sbjct: 353 QRLEAALARAM--------------------------------RATLDRAQTRL------ 374 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 S L+ A + TL+RGY + D I L + RI G Sbjct: 375 ---------SHHQAGLELLAPQRTLERGYAVLLDAKGQAIRDPAALHARARIEARLARGA 425 Query: 494 ANAIVINKAPPKEQ 507 + + P + Sbjct: 426 VDIEIAQVQPKLPE 439 >gi|309781426|ref|ZP_07676162.1| exodeoxyribonuclease VII, large subunit [Ralstonia sp. 5_7_47FAA] gi|308919839|gb|EFP65500.1| exodeoxyribonuclease VII, large subunit [Ralstonia sp. 5_7_47FAA] Length = 469 Score = 319 bits (818), Expect = 6e-85, Method: Composition-based stats. Identities = 135/492 (27%), Positives = 214/492 (43%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSE++ + ++E N VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 31 VLTVSEVNRRIAGLLERNFPLGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 89 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 90 QYADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEGQGLF 149 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K P+P P+ I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 150 DPGRKRPLPRHPRAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGASERIAA 209 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + ++N E D++IL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD Sbjct: 210 MLERVNARAE------VDVVILCRGGGSIEDLWAFNEEPVARAVAASGIPIVAGVGHETD 263 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ D+ AD+RAPTPT AAE+ P + + + L+ R + + T++ L + Sbjct: 264 VTIVDFVADVRAPTPTAAAELVSPDRARMLRDVGRDWDALSTQFRRQLDRRAQTVDWLAR 323 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + R +L L L L + R L + R Sbjct: 324 RLRSPQAQMRERRTQLAHLEGRLRFALTGRVQR---------AEHLQRLLTMRLNAARPD 374 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 ++ ++Q R + + Sbjct: 375 ATRERTRLQQAEATLARA--------------------------------MRDTLSRAQE 402 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ L+ A + TL+RGY + D + I L +T I G Sbjct: 403 R--------LARQHAGLELLAPQRTLERGYAVLLDDKGHAIRDPNALHARTHIEARLAQG 454 Query: 493 QANAIVINKAPP 504 A+ + P Sbjct: 455 TADIEIARVQPK 466 >gi|300703206|ref|YP_003744808.1| exonuclease vII, large subunit [Ralstonia solanacearum CFBP2957] gi|299070869|emb|CBJ42171.1| exonuclease VII, large subunit [Ralstonia solanacearum CFBP2957] Length = 468 Score = 319 bits (817), Expect = 7e-85, Method: Composition-based stats. Identities = 133/492 (27%), Positives = 216/492 (43%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ + ++E + + VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 29 VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 87 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 88 QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 147 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K P+P P I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 148 DVARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 207 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + +N E D+IIL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD Sbjct: 208 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDIPIVAGVGHETD 261 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ D+ AD+RAPTPTGAAE+ P + + + L+ + R + + T++ L + Sbjct: 262 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLDRRAQTVDWLAR 321 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + R RL L L L + R + R+ + + R Sbjct: 322 RLRSPQAQMRERRARLAHLEGRLRFALHGRVQRAEHVQRLLAMRLAAARP--DTASERTT 379 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + ++ ++ + Sbjct: 380 LQGIEAALARAMRAT---------------------------------------LDRAQT 400 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + + + TL+RGY + D + I L + RI G Sbjct: 401 R-LSHHQAGLELLA-------PQRTLERGYAVLLDADGRAIRDPNALRARARIEARLALG 452 Query: 493 QANAIVINKAPP 504 + + P Sbjct: 453 AVDIEIAQAQPK 464 >gi|71275154|ref|ZP_00651441.1| Exonuclease VII, large subunit [Xylella fastidiosa Dixon] gi|71898235|ref|ZP_00680409.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1] gi|71163963|gb|EAO13678.1| Exonuclease VII, large subunit [Xylella fastidiosa Dixon] gi|71731974|gb|EAO34031.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1] Length = 465 Score = 319 bits (817), Expect = 7e-85, Method: Composition-based stats. Identities = 144/489 (29%), Positives = 224/489 (45%), Gaps = 60/489 (12%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + S+L+ + ++ES V + GE+ SSGH Y +LKD +++ ++K Sbjct: 28 ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 86 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P EG+ L G++T + YQI+++ L +G G L A E+ + +L EGLF Sbjct: 87 QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 146 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P P+ IAVITSP GAVIRDI + RFP + + + P VQGD ++I Sbjct: 147 DPARKQPLPVHPRRIAVITSPGGAVIRDIFSVLMRRFPLVEIELLPSLVQGDTAAEQI-- 204 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + L+ + R D I++ARGGGS+EDLW FN+E + R IA + P+ISAIGHETD Sbjct: 205 ----THLLRCADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 260 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TL D+AAD+RAPTP+ AAE+ VP + L+ L L+ RL ++ + I + L Sbjct: 261 FTLTDFAADIRAPTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 320 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L N L R R L+ L ++ R + R+ + R Sbjct: 321 RLQARNPKMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 373 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q I Q+H++ + Q L++++ Sbjct: 374 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 401 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489 + R L++ T+ RGY ++ +NN + + + Sbjct: 402 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 451 Query: 490 FDGQANAIV 498 GQ V Sbjct: 452 AHGQLRVRV 460 >gi|315639634|ref|ZP_07894774.1| exodeoxyribonuclease VII large subunit [Enterococcus italicus DSM 15952] gi|315484595|gb|EFU75051.1| exodeoxyribonuclease VII large subunit [Enterococcus italicus DSM 15952] Length = 446 Score = 319 bits (817), Expect = 7e-85, Method: Composition-based stats. Identities = 137/503 (27%), Positives = 238/503 (47%), Gaps = 62/503 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + S++ ++ +LK +++ L V + GEIS +R + H YFSLKD H+++ A+ Sbjct: 1 MSEQYLSITAMTAYLKRKFDADPYLERVYLTGEISNFRLRPN--HQYFSLKDEHAKLSAV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F PEEG++ LVIG+I+ F S YQ+ IE + P G G L A + K+KL Sbjct: 59 MFKGAFQKLSFQPEEGMKVLVIGRISLFESSGSYQLYIEHMEPDGVGALYQAYAQLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF + +P PK IA++TSP+GAVIRDI+ + R+P ++++++P VQG++ Sbjct: 119 AKEGLFQLPKQI-LPAYPKRIAILTSPSGAVIRDIITTVRRRYPIVQLVLYPTVVQGEKA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 E+ I ++ + D +I+ RGGGSIEDLW FNDE + R I + PIIS+ Sbjct: 178 AGELIKNIQRV------EEDGQFDTMIIGRGGGSIEDLWPFNDEHLARTIVAAKTPIISS 231 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD+RA TPT AAE+AVPV + ++ R+ + ++ + Sbjct: 232 VGHETDTTIADLVADVRAATPTAAAELAVPVLSQELLRVEEIKMRVQQAFLYQLERQKQR 291 Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ +LD + L ++ + F K + ++NR+ L+ Sbjct: 292 YAKAVHSYVFRQPNRLYESKAQQLDIASQRLIQQMQSVFFAKKQSATVMMNRLSYQPLMR 351 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ Q + +++ + + Sbjct: 352 VYEREIQEQRYLDERLKKAM--------------------------------NQAYLAHT 379 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ + + L + + RGY + ++ + ++A Sbjct: 380 QRVNHAI---------------QSLDLVSPLKIMNRGYGYV-SKDDKIVKSVADIAVDDL 423 Query: 485 ILINFFDGQANAIVINKAPPKEQ 507 + I+ DG V+ ++ Sbjct: 424 LTIHLSDGTIQTTVVATHEEGKE 446 >gi|289434642|ref|YP_003464514.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170886|emb|CBH27428.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 450 Score = 319 bits (817), Expect = 8e-85, Method: Composition-based stats. Identities = 147/495 (29%), Positives = 244/495 (49%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQGD+ ++ Sbjct: 124 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D+++D+RA TPT AAE+AVP L+ L + RL +L++ K TL Sbjct: 238 ETDFALSDFSSDIRAATPTAAAELAVPDYRDLEERLAERKYRLLAGTRQLLERKERTLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L +F K FN + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQIERTDYFSERLNSAFAKQLFLKQTTFNRLNDRLNYYHPKKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ +L ++ +++ +K ++ K L +R+ Sbjct: 358 LQKEQLLLRKSALDKAMK---------QQLKDKQLSFIRQ-------------------- 388 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + LA I + Sbjct: 389 ------------------VEALEHLSPLSLLKRGFGVTY-KENKLVKSVNQLAVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 GQ +A++ K Sbjct: 430 KMQGGQIDALITAKE 444 >gi|297621382|ref|YP_003709519.1| exodeoxyribonuclease VII, large subunit [Waddlia chondrophila WSU 86-1044] gi|297376683|gb|ADI38513.1| exodeoxyribonuclease VII, large subunit [Waddlia chondrophila WSU 86-1044] Length = 457 Score = 319 bits (816), Expect = 9e-85, Method: Composition-based stats. Identities = 156/500 (31%), Positives = 249/500 (49%), Gaps = 58/500 (11%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + K S D P +VS+L+ +KH +ES + ++GE+S ++ HSSGH YFSLKD ++ Sbjct: 1 MTSKLSQDLPILTVSQLTNAIKHQLESTFPSIWLQGEVSNFK-KHSSGHLYFSLKDGQAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I A++++G + ++ +P++G + +V G I F S KYQI +++L +G G LL LE+ Sbjct: 60 ISAVMFRGHVQSLKMIPKDGDQVVVYGGINVFAPSGKYQINVQTLRLAGVGELLLKLEEL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQ 182 KK+L + G FS +HK P+P PK I ++TSPTGA IRD+L ++ R +++ PVKVQ Sbjct: 120 KKELHQRGWFSQEHKKPLPKFPKKIGIVTSPTGAAIRDMLNVLNRRHGGYHILLNPVKVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ EIA AI Q N D+II+ RGGGSIEDLW FN+E++ +AI SSIP Sbjct: 180 GEGAASEIARAIEQFN------EHKMVDVIIVGRGGGSIEDLWAFNEEIVAKAIFESSIP 233 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 II A+GHETD +A+Y AD+RAPTP+ AAE+ K LI + +L + R ++ Sbjct: 234 IIGAVGHETDHCIAEYVADVRAPTPSAAAEIVGGEKAQQIEFLIQAQKQLTQNLRRQLRQ 293 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L +LK + + + +D + ++ +I + ++S Sbjct: 294 WSTRLQQILKTPLMSSPYALIGPWLQSMDDARLNADRAIKHVIRNQKVVLKSRFQMLQSL 353 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 I RQ + + + + I +L+++ + Sbjct: 354 KPTAKILHFRQRLESLTKQCD-----------------LNISGLLKQREER--------- 387 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNL 479 + LQS KN LK+GY+ + + IT + + Sbjct: 388 ---------------------LKRVASALQSIDPKNLLKKGYSILFSKKTGSVITTIKAV 426 Query: 480 ATKTRILINFFDGQANAIVI 499 + + DG+A A + Sbjct: 427 NKGDTVKVLLSDGEALAHIS 446 >gi|170731145|ref|YP_001776578.1| exodeoxyribonuclease VII large subunit [Xylella fastidiosa M12] gi|167965938|gb|ACA12948.1| Exodeoxyribonuclease VII [Xylella fastidiosa M12] Length = 465 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 145/489 (29%), Positives = 224/489 (45%), Gaps = 60/489 (12%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + S+L+ + ++ES V + GE+ SSGH Y +LKD +++ ++K Sbjct: 28 ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 86 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P EG+ L G++T + YQI+++ L +G G L A E+ + +L EGLF Sbjct: 87 QWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 146 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P P+ IAVITSP+GAVIRDI + RFP + + + P VQGD +I Sbjct: 147 DPARKQPLPVHPRRIAVITSPSGAVIRDIFSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 204 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + L+ R D I++ARGGGS+EDLW FN+E + R IA + P+ISAIGHETD Sbjct: 205 ----THLLRCADNSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 260 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+AAD+RAPTP+ AAE+ VP + L+ L L+ RL ++ + I + L Sbjct: 261 FTLADFAADIRAPTPSVAAELLVPNQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 320 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L N L R R L+ L ++ R + R+ + R Sbjct: 321 RLQARNPKMHLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 373 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q I Q+H++ + Q L++++ Sbjct: 374 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 401 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489 + R L++ T+ RGY ++ +NN + + + Sbjct: 402 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 451 Query: 490 FDGQANAIV 498 GQ V Sbjct: 452 AHGQLRVRV 460 >gi|116619439|ref|YP_821595.1| exodeoxyribonuclease VII large subunit [Candidatus Solibacter usitatus Ellin6076] gi|116222601|gb|ABJ81310.1| Exodeoxyribonuclease VII large subunit [Candidatus Solibacter usitatus Ellin6076] Length = 455 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 136/495 (27%), Positives = 229/495 (46%), Gaps = 58/495 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V EL+ ++ ++ + + V GEIS R + +SGH YF+LK+ S + A+ ++ Sbjct: 16 VYTVGELNGAIRKALDGQFTDIRVAGEISNLR-LAASGHYYFNLKERDSIVKAVAYRSAA 74 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P++G+ + G + + +YQ+ +ESL P G G L A E+ KKKL EGLF Sbjct: 75 RFWKFKPQDGLAVIARGSLDIYEVRGEYQLQVESLEPQGLGALQLAFEQLKKKLAAEGLF 134 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P P+ I ++TSP GA I D++Q +S RFP L + +FP VQG+ +E+ Sbjct: 135 AAERKRPLPRFPRRIGIVTSPRGAAIADMIQILSRRFPGLHIRLFPALVQGEGSVEEVCR 194 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + D++I+ RGGGS+EDLW FN E + RAIA S+P+ISA+GHETD Sbjct: 195 AIEYFSRTGWA------DVLIVGRGGGSLEDLWTFNTEAVARAIAACSVPVISAVGHETD 248 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSL 310 T+AD+ ADLRAPTP+ AAEM V ++ L + A+ I + L + Sbjct: 249 ITIADFVADLRAPTPSAAAEMVVCTRDELLDRIGAARAKAAQGARYRIAMLERRLRLQGI 308 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 +AL + + R+D + + I + + R + R++ + + +R Sbjct: 309 DRALGTLHRRVGRGLQRIDEQEYRMRERIRIGLDGRERVRRALELRLRRFDVRPRLAADR 368 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + Q++ H + + R Sbjct: 369 RRMELARNSALQVM--------------------------------HARLGQDRNR---- 392 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + L + L+RGY + + + + + ++I + Sbjct: 393 -----------LGQLAATLSQLSPLRVLERGYAIVSN-DGGILKDAAAVPANSQIRVRLA 440 Query: 491 DGQANAIVINKAPPK 505 G A+V + Sbjct: 441 KGGLEAVVTASTEAE 455 >gi|227890597|ref|ZP_04008402.1| exodeoxyribonuclease VII large subunit [Lactobacillus salivarius ATCC 11741] gi|227867535|gb|EEJ74956.1| exodeoxyribonuclease VII large subunit [Lactobacillus salivarius ATCC 11741] Length = 446 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 144/502 (28%), Positives = 238/502 (47%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS L+ +L + L V + GEIS +R + H YFSLKD+++ I + Sbjct: 1 MSKEYLTVSALTKYLHTKFTRDPYLRRVYLTGEISNFRRRAT--HQYFSLKDDNAVISVM 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +KI+F PEEG++ LV G++ + S +YQIII+++ P G G L A E+ KKL Sbjct: 59 MFQSAFSKIKFEPEEGMKVLVSGRVDLYEKSGRYQIIIDTMQPDGVGALYQAYEQLVKKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+++ K P+ PK IAVITSP+GAVIRDI+ R+P+ ++++FP VQGD+ Sbjct: 119 RIEGLFNEELKKPLVKYPKRIAVITSPSGAVIRDIITTTRRRYPIAQLVLFPAVVQGDDA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + Q+N D II+ RGGGSIEDLW FN+E + RAI++S IP+IS+ Sbjct: 179 ADSLVGRLKQVN------EDGNFDTIIIGRGGGSIEDLWPFNEEKVARAISDSKIPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305 +GHETD T+AD AD+RA TPT AAE+A PV + R+ ++ I Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELATPVLSEEIVKIKQYRLRIIQVLKNKISSYQQI 292 Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L D+ + LD L + ++++ + + + ++ + Sbjct: 293 LDKVCSSYILQQPDRLYTGYVQNLDSLINRKNQAFKNLVYQNKKQLQLLESNLQHNNPSI 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ + ++ Q + + + + +F +K K+ Sbjct: 353 RIKDEKNNL----QQLLEKMHLGMLGVFNDKSYKL------------------------- 383 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + RGY+ I + + ++L Sbjct: 384 ------------------EKLMSSLDMLSPLKVMNRGYSYIL-KDGKTVRNVKSLQPNDD 424 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + + F +G A A + K+ Sbjct: 425 VTLYFENGSAEARITKTREEKK 446 >gi|295397725|ref|ZP_06807797.1| exodeoxyribonuclease VII large subunit [Aerococcus viridans ATCC 11563] gi|294974054|gb|EFG49809.1| exodeoxyribonuclease VII large subunit [Aerococcus viridans ATCC 11563] Length = 453 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 136/500 (27%), Positives = 219/500 (43%), Gaps = 62/500 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 D +VS+L+ ++ E + L V V GE+S YR H YFSLKD+H+ + + Sbjct: 2 SDKNYLTVSQLTQYIATKFEKDPYLHQVYVTGEVSNYRKRAK--HQYFSLKDDHAVLSGV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ N+++F E+G++ L IG+I F + +YQ+ I+ L P G G L E+ KK+L Sbjct: 60 MFANAFNQLKFDLEDGMKVLAIGRIGVFNATGRYQLYIDHLEPDGVGALYQRYEQLKKQL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EEGLF P+P PK IAVITSP+GAVIRDI+ + R+P +++ ++P VQG Sbjct: 120 TEEGLF-QFDPKPVPRFPKNIAVITSPSGAVIRDIITTVKRRYPVVQLTLYPTAVQGKYA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 E+ + +++ D +I+ RGGGSIEDLW FN+E +VRA+ IPIIS+ Sbjct: 179 ADELVKNLERVSA------HGDYDTVIIGRGGGSIEDLWPFNEEKVVRAVRKMDIPIISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D+ +D RA TPT AAE+A PV + L+ARL + I+Y Sbjct: 233 VGHETDTTLVDFVSDQRAATPTAAAEIATPVLSEELIRIQELQARLYRAQVNRIQYLKQR 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + + +L L L + E + + H+ R+ Sbjct: 293 LLEYQNAYIFRQPLRLYEGHQLKLKNLQARLIQSQESYLKAQKVGVQHLDQRLNQASPAI 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + + Q + I ++ Sbjct: 353 TLVNYQTKLQYMQHQL--------------------------------INSQSQQVRSKE 380 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +++ + L + + +G+ + + + Sbjct: 381 YQLQKAM---------------SQLDLLSPLKRMSKGFAYVTSKQ-EPVDSITKVDIGDP 424 Query: 485 ILINFFDGQANAIVINKAPP 504 + I DG+ A + Sbjct: 425 LAIQLADGRITAQITGTDKK 444 >gi|90961510|ref|YP_535426.1| exodeoxyribonuclease VII large subunit [Lactobacillus salivarius UCC118] gi|122449198|sp|Q1WUJ2|EX7L_LACS1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|90820704|gb|ABD99343.1| Exodeoxyribonuclease VII large subunit [Lactobacillus salivarius UCC118] Length = 446 Score = 319 bits (816), Expect = 1e-84, Method: Composition-based stats. Identities = 144/502 (28%), Positives = 238/502 (47%), Gaps = 61/502 (12%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS L+ +L + L V + GEIS +R + H YFSLKD+++ I + Sbjct: 1 MSKEYLTVSALTKYLHTKFTRDPYLRRVYLTGEISNFRRRAT--HQYFSLKDDNAVISVM 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +KI+F PE+G++ LV G++ + S +YQIII+++ P G G L A E+ KKL Sbjct: 59 MFQSAFSKIKFEPEKGMKVLVSGRVDLYEKSGRYQIIIDTMQPDGVGALYQAYEQLVKKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+++ K P+ PK IAVITSP+GAVIRDI+ R+P+ ++++FP VQGD+ Sbjct: 119 RIEGLFNEELKKPLVKYPKRIAVITSPSGAVIRDIITTTHRRYPIAQLVLFPAVVQGDDA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + Q+N D II+ RGGGSIEDLW FN+E + RAI++S IP+IS+ Sbjct: 179 ADSLVGRLKQVN------EEGNFDTIIIGRGGGSIEDLWPFNEEKVARAISDSKIPVISS 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN- 305 +GHETD T+AD AD+RA TPT AAE+A PV + R+ ++ I Sbjct: 233 VGHETDTTIADLVADVRAATPTAAAELATPVLSEEIVKIKQYRLRIIQVLKNKISNYQQI 292 Query: 306 -TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L D+ + LD L + ++++ + + + ++ + Sbjct: 293 LDKVCSSYILQQPDRLYTGYAQNLDSLINRKNQAFKNLVYQNEKQLQLLESNLQHNNPSI 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ + ++ Q + + + + +F +K K+ Sbjct: 353 RIKDEKNNL----QQLLEKMHLGMLGVFNDKSYKL------------------------- 383 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L + + RGY+ I + + ++L Sbjct: 384 ------------------EKLMSSLDMLSPLKVMNRGYSYIL-KDGKTVKNVKSLQPNDD 424 Query: 485 ILINFFDGQANAIVINKAPPKE 506 + + F +G A A + KE Sbjct: 425 VTLYFENGSAEARITKIREEKE 446 >gi|313633361|gb|EFS00204.1| exodeoxyribonuclease VII, large subunit [Listeria seeligeri FSL N1-067] Length = 451 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 146/495 (29%), Positives = 240/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P VI++P VQGD+ ++ Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSAEVIVYPTVVQGDKAAQK 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWVFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL +L++ K L Sbjct: 239 ETDFALSDFSADIRAATPTAAAELAVPDYRDLEERLAERKYRLLAGTRQLLERKERRLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + K FN + +R+ I Sbjct: 299 LKQHLILNGPKHQLEQQIERTDYFSERLNSAFAKQLLLKQTTFNRLNDRLNYYHPKKEID 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ +L ++ +++ +K ++ K L +R+ Sbjct: 359 FQQEQLLLRKSALDKAMK---------QQLKDKQLSFIRQ-------------------- 389 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + LA I + Sbjct: 390 ------------------VEALEHLSPLSLLKRGFGVTY-KENKLVKSVNQLAVGDNIQV 430 Query: 488 NFFDGQANAIVINKA 502 GQ +A++ K Sbjct: 431 KMQGGQIDALITAKE 445 >gi|323340822|ref|ZP_08081074.1| exodeoxyribonuclease VII large subunit [Lactobacillus ruminis ATCC 25644] gi|323091945|gb|EFZ34565.1| exodeoxyribonuclease VII large subunit [Lactobacillus ruminis ATCC 25644] Length = 448 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 144/503 (28%), Positives = 229/503 (45%), Gaps = 62/503 (12%) Query: 7 KNSLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + S + +V+ L+ ++K + + V + GEIS +R H YFSLKD ++ I Sbjct: 3 RMSDEKKYLTVTALTRYIKRKFTADPYMRRVYLTGEISNFRMRPK--HQYFSLKDENAVI 60 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 D +++ +K++F PEEG++ +V G++ + GS KYQ +E++ P G G L AL++ + Sbjct: 61 DVVMFASDFSKVKFRPEEGMKVIVSGRVDVYEGSGKYQFYVETMEPEGIGALYQALKELQ 120 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQG 183 +KL EGLFS K PI PK IAVITS +GAVI+DI I R+P+ +V++FP VQG Sbjct: 121 QKLSAEGLFSAPKK-PINRFPKRIAVITSRSGAVIQDIRTTIRRRYPIAQVVLFPAVVQG 179 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + + + ++N D II+ RGGGSIEDLW FN+E + RAI +S IP+ Sbjct: 180 TQAADTLVARLKEVNAR------GDFDTIIIGRGGGSIEDLWPFNEEKVARAIFDSKIPV 233 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 IS++GHETD T+AD AD+RA TPT AAE+A V + + L RL + I+Y Sbjct: 234 ISSVGHETDTTIADLVADVRAATPTAAAELATSVLSDDLAMIDQLRYRLVKSMRNRIEYL 293 Query: 304 INTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 ++ +LDR+ EL + I ++ + Sbjct: 294 KQRFEKCKNSYIFMQPERLYEGYLQKLDRMQNELIGLTQNKISQEKNRLTVANKVLYGRI 353 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + I + + + ++ +E Sbjct: 354 MPDRISLLQSELKQDRRQLE---------------------------------------- 373 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +K+ L + + RG+T + + + I L+ Sbjct: 374 -------SAGISLLKNSENRFIKAKNALDMLSPLRVMGRGFTYVTQED-HVIKSVNELSV 425 Query: 482 KTRILINFFDGQANAIVINKAPP 504 I ++ DG ANA +I Sbjct: 426 GEEIKLHLQDGYANASIIETEKE 448 >gi|313884670|ref|ZP_07818426.1| exodeoxyribonuclease VII, large subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620038|gb|EFR31471.1| exodeoxyribonuclease VII, large subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 465 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 146/497 (29%), Positives = 236/497 (47%), Gaps = 60/497 (12%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS L+ +LK + L V + GE+S +R +GH YF LKD+ + I +++K Sbjct: 13 LTVSALTAYLKQKFVRDPYLQEVYLVGEVSNFRLRP-NGHQYFRLKDDRATISVVMYKSQ 71 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V G ++ + S YQ+ +E + P G G L ALE+ K++ + GL Sbjct: 72 FAKVPFKLEEGMKVFVKGYVSLYESSGSYQMYLEDIQPDGVGALYQALEQLKEEFRKSGL 131 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F Q + PI P+ IAVITSP+GAVIRDI+ I R+P + V++FP +VQG E EI Sbjct: 132 FE-QRQGPIKRFPERIAVITSPSGAVIRDIITTIKRRYPIVDVVVFPSRVQGKEAAGEIV 190 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A + + D IILARGGGSIEDLW FN++++ AI S +P+IS++GHET Sbjct: 191 AAFEAIRQQAQD-----FDTIILARGGGSIEDLWPFNEKVVAHAILASPLPVISSVGHET 245 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL- 310 D T+AD ADLRAPTPT AAE+AVPV + L + RL + I+ + + L + Sbjct: 246 DTTIADLVADLRAPTPTAAAELAVPVLNEVLMRLDEQQLRLGQAMTMAIQGRQDYLKRIT 305 Query: 311 -LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 D+ LD L + L+ ++ ++ + + F I+ L ++ Sbjct: 306 DSYIFKQPDRLYQAYSQNLDLLDQSLQVTMQTVLNKADQAFQKTSQAIQIKNLQQSLVYQ 365 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + ++ Q +++ +L+ K Sbjct: 366 ATTLKDRSQALQRATLVYLQSQNQALKNHTD----------------------------- 396 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L++ + +++GY + + + +++ I I F Sbjct: 397 ------------------LLEARSPLQIMQQGYALVTQAD-KLVKSYKDVKIGETIEIQF 437 Query: 490 FDGQANAIVINKAPPKE 506 DG VI++ + Sbjct: 438 TDGSIYGQVIDQEAQSQ 454 >gi|114777127|ref|ZP_01452147.1| exodeoxyribonuclease VII large subunit [Mariprofundus ferrooxydans PV-1] gi|114552648|gb|EAU55108.1| exodeoxyribonuclease VII large subunit [Mariprofundus ferrooxydans PV-1] Length = 472 Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats. Identities = 126/480 (26%), Positives = 233/480 (48%), Gaps = 10/480 (2%) Query: 27 IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86 ++E + + V GE+S +SGH YF++KD H+ I A++W+ T ++ L +EG E+ Sbjct: 1 MLEQGFAAIAVSGEVSRLT-RPASGHLYFTIKDAHAAISAVVWRTTAMRLHALLKEGGEY 59 Query: 87 LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPK 146 + G ++ + YQ+++ + +G+G L E+RK+ E G F K P +P+ Sbjct: 60 IFTGHLSVYEPRGSYQLVVTRIESAGAGKLAAEFERRKQLFAERGWFDPATKKTPPHLPR 119 Query: 147 IIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRT 205 I + TS T A D+ + ++ R L++ + P VQG P I A+ L T+ + Sbjct: 120 HIGIATSATAAAFEDVRKVLATRPAWLQLTLSPCLVQGAGAPSSIVTALKALATMPQ--- 176 Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265 PD+I+L RGGGSIEDLW FNDE +V+A+ S +P+I+ IGHE D TLAD+AAD+RA Sbjct: 177 --PPDLILLVRGGGSIEDLWCFNDETVVKAVMESPVPVITGIGHEIDVTLADFAADVRAA 234 Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 TP+ AAE+A P ++ L+ + + A + L + ++ + + Sbjct: 235 TPSNAAELACPSRQQLRQQIPRVAAMAAMLHQTLAGHDRHSHALSHRLKQTWHRFTDTRH 294 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 +RL+++ ++H + + H + R+ + H + R + + Q++ Sbjct: 295 HRLEQMHSRMQHLQRVQRHEQRLHLQTLEKRLSAMEPGHQLHNRRHRLTGTVNQLHQMLH 354 Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 L+ +K L + + R++ +L +I + +++ Sbjct: 355 GSLQRK---QKLAQTQSRRLHLAAAALLPPRRQKLMPQALRLKQLLLTQIPAHRQRLALY 411 Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 L ++ ++ L RG++ D ++ +T+ L R+ + F DG A+ + + Sbjct: 412 HGRLAAYDKEDILARGFSLNYDMDDKLVTRVAALHPGARLRVEFQDGSADTRIESIKRNP 471 >gi|296133206|ref|YP_003640453.1| exodeoxyribonuclease VII, large subunit [Thermincola sp. JR] gi|296031784|gb|ADG82552.1| exodeoxyribonuclease VII, large subunit [Thermincola potens JR] Length = 402 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 128/358 (35%), Positives = 207/358 (57%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+EL+ ++K +E +L +++ ++GEIS ++ H SGH YF+LKD + I ++++ Sbjct: 5 TVAELNNYIKEKLEGDLFLNNIWLKGEISNFKF-HYSGHMYFTLKDAQATIKCVMFRSRC 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + ++FLPE G+ + G++ + +YQ+ IE + P G GTL A ++ K+KL +EGLF Sbjct: 64 SNLKFLPENGMGVVARGRVGVYERDGQYQLYIEEMQPDGIGTLYIAFQQLKEKLEKEGLF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K +P +PK +AV+TSPTGA +RDI+ + R P + +++ PV VQG+ P EIA Sbjct: 124 DQKLKKKLPRLPKRVAVVTSPTGAAVRDIITVLHRRCPHIEILLIPVAVQGENAPPEIAR 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI +N + D+II+ RGGGS+E+LW FN E++ R+I SSIP++SA+GHETD Sbjct: 184 AIEMVNAYGQA------DVIIVGRGGGSLEELWAFNTEIVARSIFASSIPVVSAVGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310 +T+AD+ ADLRAPTP+ AAE+ P L L L+ RL I ++ N L Sbjct: 238 FTIADFVADLRAPTPSAAAELVAPNYLELVQRLAELQERLVLGINFYLQKNRNRLEVCMK 297 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + +LD LE + K F + + + +++ Sbjct: 298 SRVMSRPMDLIQSLVQKLDYTVARLEQAMRGFHREKASRFQVACAGLNNLNPLATLER 355 Score = 93.7 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 3/129 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + E Q+ + ++ + + ++ + + + + I L + + R+E Sbjct: 268 QRLAELQERL--VLGINFYLQKNRNRLEVCMKSRVMSRPMDLIQSLVQKLDYTVARLEQA 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINF 489 + + + + L + TL+RGY +D + T + I Sbjct: 326 MRGFHREKASRFQVACAGLNNLNPLATLERGYAVCRDKVTGSPKTTISQFRVGETVEIIL 385 Query: 490 FDGQANAIV 498 DG + V Sbjct: 386 RDGLVDCTV 394 >gi|313905345|ref|ZP_07838711.1| exodeoxyribonuclease VII, large subunit [Eubacterium cellulosolvens 6] gi|313469815|gb|EFR65151.1| exodeoxyribonuclease VII, large subunit [Eubacterium cellulosolvens 6] Length = 428 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 123/499 (24%), Positives = 212/499 (42%), Gaps = 80/499 (16%) Query: 12 HPEYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSV +++ H++ I E + + + V+GEIS H SGH YF+LKD S++ ++++ Sbjct: 2 NNVYSVGQVNAHIRGIFEQDFALRRISVKGEISNCT-YHRSGHIYFTLKDETSQLSSVMF 60 Query: 70 KGTLN-KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 G + F + G + +V G + + KYQ+ + + G+G L K++L Sbjct: 61 AGDRRTGLGFAMKNGDKVVVTGSVEVYIRDGKYQLYAKKIELQGAGLLYERFLALKRELE 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E G+F+ ++K PIP K + ++T+PTGA +RDI R P +++I++P VQG+ Sbjct: 121 EMGMFAPEYKQPIPQYVKRLGIVTAPTGAAVRDIQNISLRRNPYIQLILYPALVQGEGAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I I L+ D II+ RGGGSIEDLW FN+E + RAI + P+ISA+ Sbjct: 181 PSIVRGIETLDAA-------GVDCIIVGRGGGSIEDLWAFNEEAVARAIFDCRTPVISAV 233 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD T+AD+ ADLRAPTP+ AAE+AV Sbjct: 234 GHETDTTIADFVADLRAPTPSAAAELAVCD------------------------------ 263 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + R D + + + + +I+S + I+ Sbjct: 264 -------------IREILKRYDICQERFSRGMTTALEYSEWKYKTRMEKIRSLRPSNQIR 310 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + R + + + RE++ + L++ I Sbjct: 311 EKRLRLDAMEDRL-------------------------RERSGRILDENRHRWNTLLSSI 345 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 K++ + I ++ + L +G++ ++ I+ + R+ I Sbjct: 346 REGQRRKLEQEKHRLEILIGRVEGASPVRKLSQGFSYVETEAGRNISSVSTVNVGDRLQI 405 Query: 488 NFFDGQANAIVINKAPPKE 506 DG + + Sbjct: 406 QVTDGTIRTEITGIEKKER 424 >gi|319892509|ref|YP_004149384.1| Exodeoxyribonuclease VII large subunit [Staphylococcus pseudintermedius HKU10-03] gi|317162205|gb|ADV05748.1| Exodeoxyribonuclease VII large subunit [Staphylococcus pseudintermedius HKU10-03] gi|323464389|gb|ADX76542.1| exodeoxyribonuclease VII, large subunit [Staphylococcus pseudintermedius ED99] Length = 448 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 143/495 (28%), Positives = 242/495 (48%), Gaps = 61/495 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 ++S L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD +S I A+++ Sbjct: 2 EKYLTISALTKYIKYKFDQDPHLQSVYIKGELSNFK-RHSSGHLYFAVKDENSVIAAMMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K N+++F P+EG + L+ +++ + YQI + + G G L E+ K KL++ Sbjct: 61 KTQANQLDFDPKEGDQVLIEARVSVYERRGNYQIYVNHMQLDGVGNLYQKFEQLKNKLMK 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EG F HK PIP P+ IA++T+ TGA IRDI ++ R+PL + I VQG + Sbjct: 121 EGYFDPAHKKPIPKYPQKIAILTASTGAAIRDIQNTLNNRYPLAQQIKISTLVQGAQAKA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I + + L D+IIL RGGGSIEDLW+FN+E +V+AI + P+ISA+G Sbjct: 181 DIIEKLQSADQL-------GADVIILGRGGGSIEDLWNFNEEDVVKAIFSCQTPVISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR--LIKYKINT 306 HETD TL+D+ ADLRA TPT AA +A P K+ L+ L A LN + + + Sbjct: 234 HETDTTLSDFVADLRAATPTQAAMLATPDKQELKQVLYQTRAYLNRYMKQHLKHTSQQLQ 293 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + D L R L ++++ + + + + RI+ + N+ Sbjct: 294 QLQSYYKLKQPGLLYEQQIQKRDELDRALHQSMQLRLQHEQQRLAMLQQRIRIKYFYDNV 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q+ +Q ++ + H I++++T Sbjct: 354 QRQKQASIDLSSQL------------------------------------HKQIQRILTS 377 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + I H++ S L + + T+ RGY+ ++ ++ IT ++ RI Sbjct: 378 KKQIFQHQLLS-----------LDNLSPTKTMLRGYSIVK-KDDEVITSSHDIHEGERIE 425 Query: 487 INFFDGQANAIVINK 501 + DG +A + Sbjct: 426 VTMKDGALDARIEKV 440 >gi|225024468|ref|ZP_03713660.1| hypothetical protein EIKCOROL_01343 [Eikenella corrodens ATCC 23834] gi|224942743|gb|EEG23952.1| hypothetical protein EIKCOROL_01343 [Eikenella corrodens ATCC 23834] Length = 450 Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats. Identities = 133/485 (27%), Positives = 221/485 (45%), Gaps = 57/485 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL++ K+++E L+ + V GE+S +SGH YF LKD +++ ++K Sbjct: 10 LSVSELNHLAKNLLEDQLAGLWVGGEVSNLV-KAASGHYYFVLKDQRAQVRCTLFKHAAR 68 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + L EG E V+GKIT + ++QI ++ + G G L A E+ K++L EGLF Sbjct: 69 SLAALLREGEEVEVLGKITLYEARGEFQINVQEVRRKGLGQLFEAYERLKQRLQAEGLFD 128 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 K P+P P+ I V+TS A +RD++ + R P +RV+++P VQG Sbjct: 129 AARKRPLPAAPQCIGVVTSLAAAALRDVVTTLRRRAPDVRVVVYPTAVQGAGSE------ 182 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + D++I+ RGGGSIEDLW FN+E VRA+A S +P++S +GHETD+ Sbjct: 183 FQVASAIAAAAEHAQADVLIVCRGGGSIEDLWAFNEEAAVRAVAASPLPVVSGVGHETDF 242 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TL D+AAD+RAPTPT AAE+A P + + L + + + + R L+ Sbjct: 243 TLTDFAADVRAPTPTAAAELASPNRAEQLDKMCRLHSHMRHTLQRRCTDAAQRLDWHAAQ 302 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + Q + L R + L ++ + RK ++ Sbjct: 303 LRHPRQKWQEQQTGLLRSRQMLADHMLRHLHRKQEQLAYLA------------------- 343 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 L ++ + + R+ + ++ ++ Sbjct: 344 ------------------ELCRRSRPQVQTATRQ------------LHTQAAQLNRHMAA 373 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + IL + + ++TL RGY+ I D + L + + ++F G Sbjct: 374 LLAQKQAQCQKQAGILDALSPQHTLSRGYSVITDRTGKVVRDAGRLHSGQVLQLHFETGT 433 Query: 494 ANAIV 498 A A V Sbjct: 434 AKAQV 438 >gi|315282226|ref|ZP_07870680.1| exodeoxyribonuclease VII, large subunit [Listeria marthii FSL S4-120] gi|313614128|gb|EFR87818.1| exodeoxyribonuclease VII, large subunit [Listeria marthii FSL S4-120] Length = 451 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 240/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L E+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFNKAGRYQFYAEHMEPDGVGALYIQFEQLKAQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + +L++ K +L Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLRAVTRQLLERKERSLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F + +R+ I+ Sbjct: 299 LKQHLMLNGPKHQLEQQMERTDYFAERLNNAFSKQIFVKQTAFQRLNDRLHYYHPKKEIE 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ I +QQ +++ +KQ L+ ++ Sbjct: 359 LQKEQIALRQQTLDKAMKQLLKDKQQTFFRQVDA-------------------------- 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 393 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVKELEVGDNIQV 430 Query: 488 NFFDGQANAIVINKA 502 G +A++ K Sbjct: 431 KMQGGHIDALITAKE 445 >gi|71901135|ref|ZP_00683241.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1] gi|71729099|gb|EAO31224.1| Exonuclease VII, large subunit [Xylella fastidiosa Ann-1] Length = 465 Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats. Identities = 146/489 (29%), Positives = 227/489 (46%), Gaps = 60/489 (12%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + S+L+ + ++ES V + GE+ SSGH Y +LKD +++ ++K Sbjct: 28 ILTPSQLNTLARDLLESAFPLVWIEGELGNV-SRPSSGHLYVTLKDAQAQVRCAMFKPKS 86 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P EG+ L G++T + YQI+++ L +G G L A E+ + +L EGLF Sbjct: 87 QWLTFQPREGLRVLARGRLTLYEVRGDYQIVLDHLEEAGEGALRRAFEQLRIRLEAEGLF 146 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P P+ IAVITSP+GAVIRDIL + RFP + + + P VQGD +I Sbjct: 147 DPARKQPLPVHPRRIAVITSPSGAVIRDILSVLMRRFPLVEIELLPSLVQGDTAAAQI-- 204 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + L+ + R D I++ARGGGS+EDLW FN+E + R IA + P+ISAIGHETD Sbjct: 205 ----THLLRGADSSGRYDAILIARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETD 260 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+AAD+RAPTP+ AAE+ VP + L+ L L+ RL ++ + I + L Sbjct: 261 FTLADFAADIRAPTPSVAAELLVPDQRVLRQHLGQLQQRLLHLQQHRLDQAIQRADQLGL 320 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L N + L R R L+ L ++ R + R+ + R Sbjct: 321 RLQARNPEMRLRLLAQRQAEAGRRLQQCLHHVLDRAQGQLRNHHTRLYALNP-------R 373 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q I Q+H++ + Q L++++ Sbjct: 374 QQIAGLQKHLKHLNPQQPLQRRLQQEQL-------------------------------- 401 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINF 489 + R L++ T+ RGY ++ +NN + + + Sbjct: 402 ----------RLHGLVRALEAVNPLATVARGYALVRRADNNTLVRDSAQVCVGDVLDTKL 451 Query: 490 FDGQANAIV 498 GQ V Sbjct: 452 AHGQLRVRV 460 >gi|224499940|ref|ZP_03668289.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes Finland 1988] Length = 450 Score = 317 bits (812), Expect = 3e-84, Method: Composition-based stats. Identities = 143/495 (28%), Positives = 239/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ LV G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + Q +++ +KQ L+ ++ Sbjct: 358 LQKEQMTLHLQALDKAMKQLLKDKQQYFFRQVDA-------------------------- 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 G +A++ K Sbjct: 430 KMQGGHIDALITTKE 444 >gi|187929873|ref|YP_001900360.1| exodeoxyribonuclease VII large subunit [Ralstonia pickettii 12J] gi|187726763|gb|ACD27928.1| exodeoxyribonuclease VII, large subunit [Ralstonia pickettii 12J] Length = 469 Score = 317 bits (812), Expect = 3e-84, Method: Composition-based stats. Identities = 133/492 (27%), Positives = 219/492 (44%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+++ + ++E N VRGEIS + +SGH YFSLKD ++I +++KG Sbjct: 31 VLSVSDVNRRIAGLLERNFPLGWVRGEISNFT-RAASGHWYFSLKDAAAQIRCVMFKGRN 89 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 90 QYADFTPREGEAVEVRALVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 149 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K P+P P+ I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 150 DVDRKRPLPRHPRAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGASERIAA 209 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + ++N E D++IL RGGGSIEDLW FN+E + RA+A S IPI++ +GHETD Sbjct: 210 MLERVNARAE------VDVVILCRGGGSIEDLWAFNEEPVARAVAASEIPIVAGVGHETD 263 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ D+ AD+RAPTPT AAE+ P + + + L+ R + + T++ L + Sbjct: 264 VTIVDFVADVRAPTPTAAAELVSPDRARMLRDVGRDWDALSAQFRRQLDRRAQTVDWLAR 323 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + R +L L L L + R + R+ + + R Sbjct: 324 RLRSPQTQMRERRTQLAHLEGRLRFALTGRVQRAEHLQRLLTMRLAAARPDA--TRERTR 381 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + ++++ + Sbjct: 382 LDQAEATLARVMRHT---------------------------------------LSRAQE 402 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ L+ A + TL+RGY + D + I L + RI G Sbjct: 403 R--------LARQHTGLELLAPQRTLERGYAVLLDAKGHAIRDPHALHARARIEARLAQG 454 Query: 493 QANAIVINKAPP 504 A+ + P Sbjct: 455 TADIEIACVQPK 466 >gi|284801746|ref|YP_003413611.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 08-5578] gi|284994888|ref|YP_003416656.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 08-5923] gi|284057308|gb|ADB68249.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 08-5578] gi|284060355|gb|ADB71294.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 08-5923] Length = 450 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 143/495 (28%), Positives = 242/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ LV G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + ++++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + Q +++ +K +L ++ ++ Sbjct: 358 LQKEQMTLRLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 GQ A++ K Sbjct: 430 KMQGGQIEALITAKE 444 >gi|258539854|ref|YP_003174353.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus Lc 705] gi|257151530|emb|CAR90502.1| Exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus Lc 705] Length = 449 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 139/498 (27%), Positives = 239/498 (47%), Gaps = 62/498 (12%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 +V+ L+ +LK +++ L+ V + GEIS YR G+ YFSLKD+H++I A++ Sbjct: 4 TSQYLTVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ +K++F EEG++ LV+G+++ + S +Y++I+E L P G G L A E+ KKKL Sbjct: 62 FRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEPDGVGALYQAFEQLKKKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 EGLF H+ P+P P+ +AV+TSP+GAVI+DI+ ++ R+P+ ++I+FP VQGD+ Sbjct: 122 AEGLFER-HQRPLPLFPQRVAVVTSPSGAVIQDIITTVARRYPILQLILFPAIVQGDQAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I + ++ +T D +I+ RGGGSIEDLW FN+E + RA+A +PI+S++ Sbjct: 181 DSIVKQLNRI------KTMSGFDAVIIGRGGGSIEDLWPFNEEKVARALAEMPMPIVSSV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKI 304 GHETD T+AD+ AD RA TPT AAE+ PV + S + Sbjct: 235 GHETDTTIADFVADRRAATPTAAAEIVTPVTLVDALNRISEDQVRLVNAMHNRLKNAATR 294 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L D+ R+D+L + L+ ++ + ++ L+ Sbjct: 295 LQRSAQSVVLTQPDRLYDQYVQRVDQLRQRLQQSINNQLRENEHRLAMATAQLDGRQLLV 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + ++ ++ ++ +++ Sbjct: 355 KVANLQRQQVDDRRRLDR------------------------------------------ 372 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + H +V+ L + L RG+ + D + + Sbjct: 373 -----AMIALVTAKHQAVANAALGLDHLSPLKILGRGFAFVTDDAGKMLKTTADYQVDAA 427 Query: 485 ILINFFDGQANAIVINKA 502 I I+ DGQ A V K Sbjct: 428 IHIHVADGQIGARVTTKE 445 >gi|91205023|ref|YP_537378.1| exodeoxyribonuclease VII large subunit [Rickettsia bellii RML369-C] gi|157827646|ref|YP_001496710.1| exodeoxyribonuclease VII large subunit [Rickettsia bellii OSU 85-389] gi|122426014|sp|Q1RK25|EX7L_RICBR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|166232362|sp|A8GXS3|EX7L_RICB8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|91068567|gb|ABE04289.1| Exodeoxyribonuclease VII large subunit [Rickettsia bellii RML369-C] gi|157802950|gb|ABV79673.1| exodeoxyribonuclease VII large subunit [Rickettsia bellii OSU 85-389] Length = 442 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 182/491 (37%), Positives = 263/491 (53%), Gaps = 56/491 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 +S E+SVSE+S +K ++E+N ++ V+GEISG + I SSGHAYF+LK+N + + Sbjct: 6 TSSQTTKEFSVSEISNKIKELLENNFGYIKVKGEISGLK-IASSGHAYFNLKENTAILAC 64 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 W+ L KI+F +G+E ++ GK++++ G+S+YQ+ +E+L P+G G ++ L +RK + Sbjct: 65 TCWRPILAKIKFPLNDGMEVVISGKLSSYAGNSRYQLSVENLQPAGLGAMVQILNERKAR 124 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186 L +EGLF+ K PIPF+P I VITS TGAVI+DI+ RI RFP VII+PV VQG+ Sbjct: 125 LEKEGLFNKIRK-PIPFLPNKIGVITSITGAVIQDIIHRIRERFPTHVIIWPVSVQGENS 183 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EIA AI N L+E +PD+II+ARGGGSIEDLW FNDE++VRA NS IPIISA Sbjct: 184 GNEIAEAIDGFNKLEEA---NKPDVIIVARGGGSIEDLWSFNDEVLVRATYNSKIPIISA 240 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+TL D AAD RAPTPT AAE AVPV+ L S+L + E L +L+K Sbjct: 241 VGHEVDYTLIDLAADKRAPTPTAAAEFAVPVRSILNSTLQSYEKVLVTNTKQLVKNHEQA 300 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + K ++ + LD L +L +I Sbjct: 301 ITNYDKINRYLAHYINHKQQLLDETGFNLLDSLPCLISL--------------------- 339 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 K+ K+ R I Y + Sbjct: 340 ----------------------------KETKLKSFSKERIHPHKIITYKTLELTHKAAY 371 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 I ++ +K+ + + + +L S Y N LKRG+ ++ + NF++ K + Sbjct: 372 IIKSANNTLKNFEYKLELNSLLLLSLDYHNVLKRGFAIVKGESGNFVSSKTTTEK--VLN 429 Query: 487 INFFDGQANAI 497 I FFDG A+ Sbjct: 430 IQFFDGNIKAV 440 >gi|199597163|ref|ZP_03210595.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus HN001] gi|258508677|ref|YP_003171428.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus GG] gi|199591967|gb|EDZ00042.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus HN001] gi|257148604|emb|CAR87577.1| Exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus GG] gi|259649983|dbj|BAI42145.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus GG] Length = 449 Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats. Identities = 139/500 (27%), Positives = 238/500 (47%), Gaps = 62/500 (12%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 +V+ L+ +LK +++ L+ V + GEIS YR G+ YFSLKD+H++I A++ Sbjct: 4 TSQYLTVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ +K++F EEG++ LV+G+++ + S +Y++I+E L P G G L A E+ KKKL Sbjct: 62 FRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEPDGVGALYQAFEQLKKKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 EGLF H+ P+P PK +AV+TSP+GAVI+DI+ ++ R+P+ ++ +FP VQGD+ Sbjct: 122 AEGLFER-HQRPLPLFPKRVAVVTSPSGAVIQDIITTVARRYPILQLTLFPAIVQGDQAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I + ++ +T D +I+ RGGGSIEDLW FN+E + RA+A +PI+S++ Sbjct: 181 DSIVKQLNRI------KTMSGFDAVIIGRGGGSIEDLWPFNEEKVARALAEMPMPIVSSV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVK---EHLQSSLINLEARLNNIIIRLIKYKI 304 GHETD T+AD+ AD RA TPT AAE+ PV + S + Sbjct: 235 GHETDTTIADFVADRRAATPTAAAEIVTPVTLVDALNRISEDQVRLVNAMHNRLKNAATR 294 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L D+ R+D+L + L+ ++ + ++ L+ Sbjct: 295 LQRSAQSVVLTQPDRLYDQYVQRVDQLRQRLQQSINNQLRENKHRLAMATAQLDGRQLLV 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + ++ ++ ++ +++ Sbjct: 355 KVANLQRQQVDDRRRLDR------------------------------------------ 372 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + H +V+ L + L RG+ + D + + Sbjct: 373 -----AMIALVTAKHQAVANAALGLDHLSPLKILGRGFAFVTDDAGKMLKTTADYQVDAA 427 Query: 485 ILINFFDGQANAIVINKAPP 504 I I+ DGQ A V K Sbjct: 428 IHIHVADGQIGARVTTKEKK 447 >gi|282891363|ref|ZP_06299865.1| hypothetical protein pah_c050o166 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498860|gb|EFB41177.1| hypothetical protein pah_c050o166 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 471 Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats. Identities = 152/497 (30%), Positives = 256/497 (51%), Gaps = 34/497 (6%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + P +VS+L+ +KH +ES S V ++GE+S + SSGH YFSLKD H+++ A++ Sbjct: 2 PHEAPILTVSQLTTAIKHSLESTFSLVWLQGEVSNCKVQ-SSGHIYFSLKDAHAQVAAVM 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++G + ++ +P++G + ++ G++ +P + KYQI++ L +G G LL LE+ K KL Sbjct: 61 FRGDASSLKMIPKDGDQVIIQGQLNVYPPTGKYQIVVRELRLAGLGELLLKLEELKIKLH 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187 ++G F +HK +P PK I V+TSPTGAVI+DIL ++ R +I+ PVKVQG Sbjct: 121 KKGWFKAEHKKALPKFPKRIGVVTSPTGAVIQDILNILTRRATGFHLILNPVKVQGPGAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EIA AI NT D++I+ RGGGSIEDLW FN+E++ AI NS IP+ISA+ Sbjct: 181 QEIAKAIQDFNTF------NLVDVMIVGRGGGSIEDLWAFNEEIVAEAIFNSQIPVISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD +ADY AD+RAPTP+ AAE+ + + RL++ + + + + L Sbjct: 235 GHETDHCIADYVADVRAPTPSAAAEIVITENAQQLHHFQQILRRLDHSMRQTLHHHRLCL 294 Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++LK L + L + D +EL+ + ++ + +++ Sbjct: 295 KTILKQPLLASPYAILGSWMQKADEFRQELDQSTFRLLKQHRFALESREKILQTLKPTMQ 354 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I ++ ++ ++ I+ V +K+ L + +I Sbjct: 355 IFHLKEKLVNLRKAIDFSVL-----------QKLNELRKAIQLKDEKIL----------- 392 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTR 484 ++ K++ + L+S +N L +GYT + + I+ L + Sbjct: 393 -MDQRWKVKLEHLRELLKNKEDALKSINPRNLLTKGYTILFSEKDQSVISSVHMLKKDQK 451 Query: 485 ILINFFDGQANAIVINK 501 I + DG+A A + Sbjct: 452 IRMLLSDGEALAQINEI 468 >gi|313623885|gb|EFR94000.1| exodeoxyribonuclease VII, large subunit [Listeria innocua FSL J1-023] Length = 451 Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQGD+ + Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQR 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVKNIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + +L++ K TL Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQLLERKERTLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L++ + K FN + +R+ I Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFAERLKNAFSKQVLLKQTTFNRLNDRLHYYHPKKEIA 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ I ++Q +++ +K +Q K++ Sbjct: 359 LQKEQITLRKQALDKAMK---------------------QQLKDK--------------- 382 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + L+ + LKRG+ + + L I + Sbjct: 383 -----------QQAFIRQVEALEHLSPLALLKRGFGVTYKA-GELVKTVQELEIGDNIQV 430 Query: 488 NFFDGQANAIVINKA 502 G +A + K Sbjct: 431 KMQGGHIDAHITAKE 445 >gi|198283756|ref|YP_002220077.1| exodeoxyribonuclease VII large subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665433|ref|YP_002426387.1| exodeoxyribonuclease VII, large subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248277|gb|ACH83870.1| exodeoxyribonuclease VII, large subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517646|gb|ACK78232.1| exodeoxyribonuclease VII, large subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 446 Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats. Identities = 126/497 (25%), Positives = 221/497 (44%), Gaps = 55/497 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 N P +VS L+ + I+E N + V GE+S + SGH YFSLKD +++ Sbjct: 3 SNDSQIPILTVSALNAAAREIIEGNFPLLRVEGELSNFSS-PGSGHWYFSLKDARAQVRC 61 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++ P G++ V+ + T + G +Q+I+E L+ +G G L + K Sbjct: 62 AMFRQRNTYTRVEPRNGMQVQVLAQPTLYEGRGDFQLIVEQLLDAGVGDLQARFVALRDK 121 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ + K P+P P+ +AV+TS +GA + DI ++ R+P L V+I+PV VQGD+ Sbjct: 122 LAAEGLFAPELKRPLPRWPQRVAVVTSASGAALHDIQVTLARRWPMLAVMIYPVLVQGDQ 181 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +I A+ ++ + ++ D++ILARGGGS EDLW FN+E + RAI +P+++ Sbjct: 182 AAAQICTALTRIASRQQE------DVVILARGGGSAEDLWCFNEESVARAIRACPVPVVT 235 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D+T+AD+A DLRA TPT AAE P + + +L + R ++ Sbjct: 236 GIGHEIDFTIADFAGDLRAATPTAAAEAVSPDRAEWLPRVQTQRRQLEQSMQRTLRDATQ 295 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L+ L L + + + + +RL L ++ + R Sbjct: 296 RLDYLRLRLRHPGERVRDAEHRLRLAREALWQAMQHQQTLWGGRLQMLQARRLRQDPRQR 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q + + ++ + + + L +++++ A L + Sbjct: 356 LQSLTEMLKTRRAALILAIYKALSSAAAQQQQQAAALRL--------------------- 394 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L+RG+ ++D + I ++ R+ Sbjct: 395 --------------------------LDPLAVLQRGFAVLRDESGKVIFGSASIEVHARV 428 Query: 486 LINFFDGQANAIVINKA 502 G V+ K+ Sbjct: 429 TATLAQGTLLCEVLEKS 445 >gi|149198865|ref|ZP_01875907.1| exodeoxyribonuclease VII, large subunit [Lentisphaera araneosa HTCC2155] gi|149138063|gb|EDM26474.1| exodeoxyribonuclease VII, large subunit [Lentisphaera araneosa HTCC2155] Length = 443 Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats. Identities = 146/496 (29%), Positives = 232/496 (46%), Gaps = 60/496 (12%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S + +SVS+++ ++ ++E + V+GE+S IHSSGH YFS+KD S++ Sbjct: 2 SQNQNMWSVSQVAMAVRQVLEQGVKPFWVKGEVSNLT-IHSSGHVYFSIKDAKSQVSCTY 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + G F ++G+E V G +T F S + QII+ L P G G L E+ KKKL Sbjct: 61 FNGAQQARSFSMQDGMEVEVFGSLTYFAPSGRTQIIVRELRPGGVGKLQLEFEQLKKKLS 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 + GLFS + K +P P+ IAVI+S GA + D LQ ++ RFP V +FPV VQG+ Sbjct: 121 DLGLFSQEKKQSLPVFPEKIAVISSADGAALHDFLQVLNRRFPGKEVRLFPVPVQGEGAH 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 K+IA AI + N ++ D+I++ RGGGSIEDLW FN E + AIA S IPIISAI Sbjct: 181 KKIAGAIHRCNLMEAA------DVIVMTRGGGSIEDLWEFNQEHLAYAIAESHIPIISAI 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D+T++D+ ADLRAPTP+ AAE+ V + L N L+ + + Sbjct: 235 GHEVDFTISDFVADLRAPTPSAAAELVVKSRAEFIQELNNQMRSLDKNLQLKLYSLAQKF 294 Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L N ++ L LD + +LE L+ + + + R+K+ + Sbjct: 295 RECKHRLMMNNPEKKLEVQYQNLDFVKLKLEQALQKRLQYMSQRLMELEGRLKNRTP--D 352 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + ++ + + + + +R Sbjct: 353 ILRQKEELQHLKTRLMTSFENFVRNKG--------------------------------- 379 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++++ H ++ + ++TL RGY+ ++ + ++ + Sbjct: 380 -------SQLEAIHKNLKLL-------NPQSTLDRGYSIVRSK-GEILHSNEDVEKSDLL 424 Query: 486 LINFFDGQANAIVINK 501 I G A V K Sbjct: 425 EIRLAKGSLVAKVEKK 440 >gi|317132178|ref|YP_004091492.1| exodeoxyribonuclease VII, large subunit [Ethanoligenens harbinense YUAN-3] gi|315470157|gb|ADU26761.1| exodeoxyribonuclease VII, large subunit [Ethanoligenens harbinense YUAN-3] Length = 419 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 127/367 (34%), Positives = 214/367 (58%), Gaps = 9/367 (2%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +VS+L++++ ++ES+ LS V +RGEIS ++ + SGH Y SLKD + I A+++KG Sbjct: 7 VLTVSQLNFYVHTLLESDERLSGVFLRGEISNFKNHYRSGHYYLSLKDEDAVIHAVMFKG 66 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ FLP++G++ +V G+ + + +YQ I+ + P G G L A E+ K+KL +EG Sbjct: 67 NAQRLRFLPQDGMKVIVSGRASLYERDGQYQFYIDDMQPDGIGALHVAFEQLKEKLRKEG 126 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 LF K P+P P+ I V+TS TGA ++DIL + R+P+ V++ PV VQG E P +I Sbjct: 127 LFDASRKRPLPLYPERIGVVTSATGAALQDILHVLGRRWPVAEVVLAPVLVQGVEAPGQI 186 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +N + D++I+ RGGGSIEDLW FN+E + R IA S IP++SA+GHE Sbjct: 187 CAAIRAMNAARAA------DVLIVGRGGGSIEDLWAFNEEGVARCIAASDIPVVSAVGHE 240 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ AD RAPTP+ AAE+ P + + + L ++AR+ +++ + + + + + Sbjct: 241 TDFTIADFVADARAPTPSAAAELVSPERAAVTAGLYAMQARMRSLLAQKLADQRARMQAA 300 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + L + L+ R + D L L + + + + + + + + + Sbjct: 301 AQRLYVPARLLNMHRMKTDMLDARLTTAAKARTEQARAALSALAGELDALNPLKVLSRGY 360 Query: 371 QHILEKQ 377 + Q Sbjct: 361 TVVENAQ 367 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 47/140 (33%) Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 + ++ L +++ ++ + L R+ + + Sbjct: 279 QARMRSLLAQKLADQRARMQAAAQRLYVPARLLNMHRMKTDMLDARLTTAAKARTEQARA 338 Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 ++S L + L RGYT +++ +T+ LA + + F DG+A +V + Sbjct: 339 ALSALAGELDALNPLKVLSRGYTVVENAQGCAVTRAAALAPGESVTLRFLDGRAYCVVQS 398 Query: 501 KAPPKEQPTKKCQLHNNKRE 520 + + + + Sbjct: 399 VGTIDRDGEQDEKRDGERTD 418 >gi|254827622|ref|ZP_05232309.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL N3-165] gi|258600000|gb|EEW13325.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL N3-165] Length = 450 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 141/495 (28%), Positives = 240/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ LV G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +++ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDQLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + Q +++ +K +L ++ ++ Sbjct: 358 LQKEQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 G +A++ K Sbjct: 430 KMQGGHIDALITAKE 444 >gi|291562671|emb|CBL41487.1| exodeoxyribonuclease VII, large subunit [butyrate-producing bacterium SS3/4] Length = 422 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 129/489 (26%), Positives = 214/489 (43%), Gaps = 79/489 (16%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV++++ ++K++ + + V+GE+S + HSSGH YF+LKD + A+++ Sbjct: 4 VYSVAQVNSYIKNMFAQDFLLRRLSVKGEVSNCK-YHSSGHIYFTLKDGGGTLQAVMFAS 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F EG + +V G + + KYQ+ + SG G L EK K+L E G Sbjct: 63 QRRGLNFKLAEGQQVVVKGTVDVYERDGKYQLYASEIELSGRGDLYLRFEKLLKELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F Q+K PIP K + ++T+PTGA IRDI+ R P +++I++P VQGD I Sbjct: 123 MFDPQYKRPIPRFAKTVGIVTAPTGAAIRDIMNISHRRNPYVQLILYPALVQGDGAKDSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L+ + D++I+ RGGGSIEDLW FN+E + RAI + P+ISA+GHE Sbjct: 183 VKGIRTLDAM-------GLDVLIVGRGGGSIEDLWAFNEEEVARAIFACNTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADYAADLRAPTP+ AAE+AV + L + Sbjct: 236 TDVTIADYAADLRAPTPSAAAELAVFDYFQFRMDLNARK--------------------- 274 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + ++ +R+K D L + Sbjct: 275 -----------------------------QRLMKEMGTCLERAKSRLKHDELTLRFYDPK 305 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + EK++ + + L R ++ T + Sbjct: 306 SQLNEKKKRL------------------ADVEDTLLRLIAERQQETRRDLQNAETLLRRS 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ ++ + ++++ + L + + G+ I D + + RI + Sbjct: 348 MADRLAADKRNLAVKSERLWGLSPLKKISGGFGFITDGDGKRLETVEQAEAGKRITVRVK 407 Query: 491 DGQANAIVI 499 DG+ A+V Sbjct: 408 DGRIGAVVD 416 >gi|194288711|ref|YP_002004618.1| exodeoxyribonuclease vii large subunit [Cupriavidus taiwanensis LMG 19424] gi|193222546|emb|CAQ68549.1| exonuclease VII, large subunit [Cupriavidus taiwanensis LMG 19424] Length = 461 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 134/507 (26%), Positives = 231/507 (45%), Gaps = 57/507 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +P V EL++ + ++E + VRGEIS + +SGH YFSLKD Sbjct: 10 DPSFTAPRSGREVIPVGELNHAIARVLERSFPLAWVRGEISNFT-RAASGHWYFSLKDAR 68 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I ++++G ++F P EG V ++ + + Q+ +E++ +G G L A Sbjct: 69 AQIRCVMFRGRNQHVDFQPREGEAVEVRAVVSMYEARGELQLGVEAMRRAGLGNLYEAFL 128 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180 + K+KL + GLF+ + K P+P P+ I V+TS A +RD+L + R + V+++PV Sbjct: 129 RLKEKLSQAGLFAPERKRPVPAQPRAIGVVTSLQAAALRDVLSTLRRRAPHVPVVVYPVP 188 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG ++IA+ + E D++IL RGGGSIEDLW FN+E++ +AIA + Sbjct: 189 VQGAGAAQKIADMLDAAAARSE------CDVLILCRGGGSIEDLWSFNEEVVAQAIARCT 242 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P++S +GHETD+T+AD+ AD+RAPTPTGAAE+ P + HL + + L + R + Sbjct: 243 LPVVSGVGHETDFTIADFVADVRAPTPTGAAELVSPDRSHLLAQTLRARDALRQCLRRGL 302 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ L + + + L R ++D L R L L Sbjct: 303 DLRAQHLDWLARRVRSPQAQLQERRAQVDNLARHLRSALR-------------------- 342 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + Q+H +Q++ R + A + L ++ + H Sbjct: 343 -----------DTVVSQRHRQQLLAMRWRACRPDALAAHAGVARLWQRLQAAALRQHER- 390 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 R+ L+ A + TL+RGY + D + + Sbjct: 391 --AAQRLARS---------------AGALELLAPQRTLERGYAVLLDQRGRALRAPAEIR 433 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQ 507 + + + +G A+ + + Sbjct: 434 AGSVVEAHLAEGVADLAIAGVQAKLPE 460 >gi|307609618|emb|CBW99120.1| exonuclease VII, large subunit [Legionella pneumophila 130b] Length = 443 Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats. Identities = 152/496 (30%), Positives = 230/496 (46%), Gaps = 57/496 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S P +VS+L+ +K +E+ + V V GEIS SSGH YF+LKD+ ++I Sbjct: 2 SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60 Query: 69 WKGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +K + + +G + + GK++ + +YQ+I+E ++ +G G L E+ K KL Sbjct: 61 FKNRHSNSLLRNFNDGQQIVATGKLSLYEARGEYQLIVEEIVEAGMGILYQRFEELKIKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+ + K +P IP+ I +ITSPTGA I+DIL + RFP+ R+II+P +VQG Sbjct: 121 ASEGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLDRRFPIARIIIYPSEVQGQTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P+++ N+LK R ++ILARGGGSIEDLW FNDE + R IA S IP++S Sbjct: 181 PQQLV------NSLKLANAHKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHETD+T+AD+ AD RA TPT AA P L + L RL++ IIRLIK Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLIKGLQLK 294 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LN L+ + + Q +S LD L R+L + I N ++++ I Sbjct: 295 LNHLIDKIASPRQAISTYWQTLDYLERQLISAMTQFINLNINKVNIFSTQLQASNPKIQI 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + + + + Q + + +L + Sbjct: 355 ERTKIQLQQLIMQLTQ--------------------------------EIRIKVNQLKNQ 382 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + LS L + RGY + N + + I Sbjct: 383 LSTNLSTL---------HAVSPLATLD------RGYAIV-SKNQRILFAAQQAQIGDTIN 426 Query: 487 INFFDGQANAIVINKA 502 I G V Sbjct: 427 IRLAKGSLACEVTQIK 442 >gi|148360529|ref|YP_001251736.1| exonuclease VII large subunit [Legionella pneumophila str. Corby] gi|166232357|sp|A5IG90|EX7L_LEGPC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|148282302|gb|ABQ56390.1| exonuclease VII, large subunit [Legionella pneumophila str. Corby] Length = 443 Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats. Identities = 153/496 (30%), Positives = 231/496 (46%), Gaps = 57/496 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S P +VS+L+ +K +E+ + V V GEIS SSGH YF+LKD+ ++I Sbjct: 2 SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60 Query: 69 WKGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +K + + +G + + GK++ + +YQ+I+E ++ +G G L E+ K KL Sbjct: 61 FKNRHSSSLLRNFNDGQQIVASGKLSLYEARGEYQLIVEEIVEAGMGVLYQRFEELKIKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+ + K +P IP+ I +ITSPTGA I+DIL ++ RFP+ RVII+P +VQG Sbjct: 121 ASEGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLARRFPIARVIIYPSEVQGQTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P+++ NA+ N R ++ILARGGGSIEDLW FNDE + R IA S IP++S Sbjct: 181 PQQLVNALKLANA------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHETD+T+AD+ AD RA TPT AA P L + L RL++ IIRLIK Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLIKGLQLK 294 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LN L+ + + Q +S LD L R+L + I N ++++ I Sbjct: 295 LNHLIDKIASPRQAISTYWQTLDYLERQLISAMTQFINLNINKVNIFSTQLQASNPKIQI 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + + + + Q + + +L + Sbjct: 355 ERTKIQLQQLIMQLTQ--------------------------------EIRIKVNQLKNQ 382 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + LS L + RGY + N + + I Sbjct: 383 LSTNLSTL---------HAVSPLATLD------RGYAIV-SKNQRILFAAQQAQIGDTIN 426 Query: 487 INFFDGQANAIVINKA 502 I G V Sbjct: 427 IRLAKGSLACEVTQIK 442 >gi|290893530|ref|ZP_06556513.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J2-071] gi|290556875|gb|EFD90406.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J2-071] gi|307570943|emb|CAR84122.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes L99] Length = 450 Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats. Identities = 142/495 (28%), Positives = 242/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + ++++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + Q +++ +K +L ++ ++ Sbjct: 358 LQKEQMTLRLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 GQ A++ K Sbjct: 430 KMQGGQIEALITAKE 444 >gi|16800466|ref|NP_470734.1| exodeoxyribonuclease VII large subunit [Listeria innocua Clip11262] gi|22095671|sp|Q92BZ3|EX7L_LISIN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|16413871|emb|CAC96629.1| lin1398 [Listeria innocua Clip11262] Length = 450 Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats. Identities = 143/495 (28%), Positives = 239/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFQ 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQGD+ + Sbjct: 124 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTVVQGDKAAQR 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGRINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + +L++ K L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQLLERKERALEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L++ + K FN + +R+ I Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFAERLKNAFSKQVLLKQTTFNRLNDRLHYYHPKKEIA 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ I+ ++Q +++ +K +Q K++ Sbjct: 358 LQKEQIILRKQALDKAMK---------------------QQLKDK--------------- 381 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + L+ + LKRG+ + + L I + Sbjct: 382 -----------QQAFIRQVEALEHLSPLALLKRGFGVTYKA-GELVKTVQELEIGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 G +A + K Sbjct: 430 KMQGGHIDAHITAKE 444 >gi|16803401|ref|NP_464886.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes EGD-e] gi|224501696|ref|ZP_03670003.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL R2-561] gi|254829882|ref|ZP_05234537.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 10403S] gi|22095665|sp|Q8Y7C4|EX7L_LISMO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|16410777|emb|CAC99439.1| lmo1361 [Listeria monocytogenes EGD-e] Length = 450 Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats. Identities = 142/495 (28%), Positives = 240/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ LV G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + Q +++ +K +L ++ ++ Sbjct: 358 LQKEQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 G +A++ K Sbjct: 430 KMQGGHIDALITAKE 444 >gi|217964493|ref|YP_002350171.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes HCC23] gi|217333763|gb|ACK39557.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes HCC23] Length = 451 Score = 316 bits (809), Expect = 7e-84, Method: Composition-based stats. Identities = 142/495 (28%), Positives = 242/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + ++++ K +L Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + Q +++ +K +L ++ ++ Sbjct: 359 LQKEQMTLRLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 393 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 430 Query: 488 NFFDGQANAIVINKA 502 GQ A++ K Sbjct: 431 KMQGGQIEALITAKE 445 >gi|330833280|ref|YP_004402105.1| exodeoxyribonuclease VII large subunit [Streptococcus suis ST3] gi|329307503|gb|AEB81919.1| exodeoxyribonuclease VII large subunit [Streptococcus suis ST3] Length = 447 Score = 315 bits (808), Expect = 8e-84, Method: Composition-based stats. Identities = 146/497 (29%), Positives = 233/497 (46%), Gaps = 62/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R S H YFSLKD+ + I A +W G Sbjct: 5 LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F EEG++ VIG+I + + Y I+IE P G G L E+ K+ L +EGL Sbjct: 63 YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++ K +P K I VITSP+GAVI+DI+ +S RFP + ++++P KVQGD +E+ Sbjct: 123 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 TNIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV K L L E R + +++ L + Sbjct: 237 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LDRL +L+ ++ + ++ + + R++ ++ Sbjct: 297 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQACLLLQRRLQGVHPGRKVES 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ I+++++ ++ + + Sbjct: 357 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 383 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + RGY I+ + I N+ + I Sbjct: 384 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 428 Query: 489 FFDGQANAIVINKAPPK 505 DGQ + V + + Sbjct: 429 MKDGQLDVEVKHVQTDE 445 >gi|257091770|ref|YP_003165411.1| exodeoxyribonuclease VII large subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044294|gb|ACV33482.1| exodeoxyribonuclease VII, large subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 469 Score = 315 bits (808), Expect = 8e-84, Method: Composition-based stats. Identities = 132/525 (25%), Positives = 220/525 (41%), Gaps = 60/525 (11%) Query: 1 MNPFSQKNS---LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL 57 M+ + P +VS L+ + +E+ V GE+S +SGH YFSL Sbjct: 1 MSDIPSPATGLPAFVPVIAVSLLNRLARERLEAAFPLCWVAGEVSNL-SHAASGHVYFSL 59 Query: 58 KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 KD +++ ++++ + + E G +T + +Q+ +E+ +G G L Sbjct: 60 KDAAAQVRCVMFRSRTQLLGWRLENGQHIEARVLVTLYEARGDFQLNVEAARRAGVGNLY 119 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 + K+KL EGLF+ K P+P P+ I ++TS A +RD+L ++ R P + +++ Sbjct: 120 EKFLRLKEKLESEGLFASAGKRPLPGFPRRIGIVTSLQAAALRDVLSTLARRAPQVGIVV 179 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 +P VQG+ +IA +I + +I+ RGGGS+EDLW FNDE++ RAI Sbjct: 180 YPTLVQGEGAASQIAESIRI------AGERRECETLIVCRGGGSMEDLWAFNDELVARAI 233 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 IP++S IGHETD+T+AD+AAD RAPTPT AAE+A P + L + L + L + Sbjct: 234 RACPIPVVSGIGHETDFTIADFAADQRAPTPTAAAELAAPEQLVLLARLAARQLALRRSV 293 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + I + L+ L + L + Q L+ R L R Sbjct: 294 DQQINQRGQQLDWLTRRLQHPAQYLAHQREVL-----------------------RNQQR 330 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + L+ + R + + + + + R + A L +Q R Sbjct: 331 QLAAALLQASARARTALADLSRRLLLARPETSRRTGQV-EALAARLRGAWQQAAQR---- 385 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 ++ T L L RGY D + Sbjct: 386 ---------------------QGADLARLTASLAHLNPAAVLARGYCVALDERGRIVRDS 424 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521 R++ RI + F G+A+A V+ P + + + Sbjct: 425 RSVEPSQRIAVFFERGRADAAVLAVFPDGGLAPAVAAIASKAGPE 469 >gi|229025643|ref|ZP_04182049.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272] gi|228735641|gb|EEL86230.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272] Length = 362 Score = 315 bits (808), Expect = 8e-84, Method: Composition-based stats. Identities = 149/366 (40%), Positives = 209/366 (57%), Gaps = 12/366 (3%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V+ L+ ++K +E +L V ++GEIS ++ HS GH YF+LKD ++RI A+ Sbjct: 1 MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFK-YHSRGHMYFTLKDENARIAAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G I+F PE G++ LV GKI+ + S YQI I+ + P G G L A E+ K +L Sbjct: 60 MFAGHNRNIKFKPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEGLFS +K IP K I VITSPTGA IRDI+ I R+P+ VI+FPV VQG+ Sbjct: 120 EEEGLFSQVYKKTIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI N ++E D++I+ RGGGSIE+LW FN+E++ RAI S IPIISA Sbjct: 180 APSIVQAIRTANEMEE------IDVLIVGRGGGSIEELWAFNEEVVARAIFTSEIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTPT AAE+AVP LQ ++ RL + + K Sbjct: 234 VGHETDFTIADFVADLRAPTPTAAAELAVPNVLELQEKVLQRTLRLQRAMRERVHKKEEK 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L K+ Q +LDR +L E I +K + ++ Sbjct: 294 LQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQ 353 Query: 365 NIQKNR 370 N+ Sbjct: 354 KNHANK 359 >gi|146319310|ref|YP_001199022.1| exodeoxyribonuclease VII large subunit [Streptococcus suis 05ZYH33] gi|146321513|ref|YP_001201224.1| exodeoxyribonuclease VII large subunit [Streptococcus suis 98HAH33] gi|145690116|gb|ABP90622.1| Exonuclease VII, large subunit [Streptococcus suis 05ZYH33] gi|145692319|gb|ABP92824.1| Exonuclease VII, large subunit [Streptococcus suis 98HAH33] gi|292558942|gb|ADE31943.1| Exonuclease VII, large subunit [Streptococcus suis GZ1] Length = 449 Score = 315 bits (808), Expect = 9e-84, Method: Composition-based stats. Identities = 145/497 (29%), Positives = 232/497 (46%), Gaps = 62/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R S H YFSLKD+ + I +W G Sbjct: 7 LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQVTMWAGV 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F EEG++ VIG+I + + Y I+IE P G G L E+ K+ L +EGL Sbjct: 65 YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++ K +P K I VITSP+GAVI+DI+ +S RFP + ++++P KVQGD +E+ Sbjct: 125 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 185 TNIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 238 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV K L L E R + +++ L + Sbjct: 239 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 298 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LDRL +L+ ++ + ++ + + R++ ++ Sbjct: 299 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQACLLLQQRLQGVHPGRKVES 358 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ I+++++ ++ + + Sbjct: 359 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + RGY I+ + I N+ + I Sbjct: 386 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 430 Query: 489 FFDGQANAIVINKAPPK 505 DGQ + V + + Sbjct: 431 MKDGQLDVEVKHVQTDE 447 >gi|253752343|ref|YP_003025484.1| exodeoxyribonuclease VII large subunit [Streptococcus suis SC84] gi|253754169|ref|YP_003027310.1| exodeoxyribonuclease VII large subunit [Streptococcus suis P1/7] gi|253756103|ref|YP_003029243.1| exodeoxyribonuclease VII large subunit [Streptococcus suis BM407] gi|251816632|emb|CAZ52272.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis SC84] gi|251818567|emb|CAZ56400.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis BM407] gi|251820415|emb|CAR47053.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis P1/7] gi|319758744|gb|ADV70686.1| putative exodeoxyribonuclease VII large subunit [Streptococcus suis JS14] Length = 447 Score = 315 bits (808), Expect = 1e-83, Method: Composition-based stats. Identities = 145/497 (29%), Positives = 232/497 (46%), Gaps = 62/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R S H YFSLKD+ + I +W G Sbjct: 5 LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQVTMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F EEG++ VIG+I + + Y I+IE P G G L E+ K+ L +EGL Sbjct: 63 YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++ K +P K I VITSP+GAVI+DI+ +S RFP + ++++P KVQGD +E+ Sbjct: 123 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 TNIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV K L L E R + +++ L + Sbjct: 237 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LDRL +L+ ++ + ++ + + R++ ++ Sbjct: 297 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQACLLLQQRLQGVHPGRKVES 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ I+++++ ++ + + Sbjct: 357 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 383 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + RGY I+ + I N+ + I Sbjct: 384 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 428 Query: 489 FFDGQANAIVINKAPPK 505 DGQ + V + + Sbjct: 429 MKDGQLDVEVKHVQTDE 445 >gi|283769472|ref|ZP_06342368.1| exodeoxyribonuclease VII, large subunit [Bulleidia extructa W1219] gi|283103740|gb|EFC05126.1| exodeoxyribonuclease VII, large subunit [Bulleidia extructa W1219] Length = 461 Score = 315 bits (808), Expect = 1e-83, Method: Composition-based stats. Identities = 138/496 (27%), Positives = 220/496 (44%), Gaps = 47/496 (9%) Query: 16 SVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS +S +K ++E +L + + GEIS +R SS H YFSLKD + I+ IW T+ Sbjct: 6 SVSVVSKRIKSLLERDLPLHNFLMEGEISNFR---SSKHWYFSLKDEQASINCAIWNSTI 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + I F P+ G + +V + + ++ + I ++ G G L+ LE+ KKKL EGLF Sbjct: 63 SHIPFKPQNGDQVIVKCSLGVYVPNTSITLTITAMRKQGIGDLMQQLEELKKKLKTEGLF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +HK P+P PK I +IT A D+++ I+ R+P+ + + VQG I Sbjct: 123 DAKHKKPLPTYPKEIGIITGKDTAGKADMIRTINLRWPMAKQFFYECPVQGSGSIPLILK 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + + D++ILARGGGS+EDL+ FN E IVR + PI++ IGHETD Sbjct: 183 AIQEADHGHH-------DVLILARGGGSLEDLFIFNSEKIVRCVYACQTPIVTGIGHETD 235 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL DY +DLRA TPTGAAE P I+ + + + Sbjct: 236 TTLVDYVSDLRANTPTGAAEAVTP---------------------NQIEVRQSLRHMFSH 274 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + LS + L RL + ++ R ++ L + K ++ Sbjct: 275 LIQQMLTRLSLVQQNLSRLEKSAYFQNPELLTRDK------SYQLDQYVL--RLSKQKET 326 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF----YLHTHIKKLITRIE 428 +LE ++ Q + + + + L ++Q K ++ H+ + + Sbjct: 327 LLELRKQCNQWIHRFESSVIQRSRFYQNQLQDYQKQMKQKLQETSSNQKYHLSQQKNTLS 386 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + ++L +++ L RGY+ I I +LA I I Sbjct: 387 KALQQYSQLKRNDYHHLIQLLDAYSPLKILNRGYSVIL-KEGKAIHSVDDLAIGDMIDIR 445 Query: 489 FFDGQANAIVINKAPP 504 DG A + K Sbjct: 446 LNDGFIKANIQTKEKS 461 >gi|222153403|ref|YP_002562580.1| exodeoxyribonuclease VII large subunit [Streptococcus uberis 0140J] gi|254783712|sp|B9DUT9|EX7L_STRU0 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|222114216|emb|CAR42780.1| putative exodeoxyribonuclease VII large subunit [Streptococcus uberis 0140J] Length = 442 Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats. Identities = 145/494 (29%), Positives = 237/494 (47%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD ++ I A +W Sbjct: 5 LSVSHLTKYLKMKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDENAVIQATMWASA 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ F EEG++ VIG++ + S Y IIIE +P G G L E+ KKKL EG Sbjct: 63 YKRLAFDLEEGMKINVIGRVQIYEPSGSYSIIIEEAVPDGIGALAIQFEQLKKKLTNEGF 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK +P + + VITSP+GAVIRDI+ IS RFP + +++FP KVQG+ +EI Sbjct: 123 FDDKHKQDLPQFVQKVGVITSPSGAVIRDIITTISRRFPGVEILLFPTKVQGEGAAEEIV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V AI S +PIIS++GHET Sbjct: 183 ANISKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVHAIFASQLPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS-- 309 D TL+D+ AD RA TPT AAE+A PV + S I+ + + ++ Sbjct: 237 DVTLSDFVADRRAATPTAAAELATPVTKADIISWISERQNRSYQATLRLLHQKRDQVMVL 296 Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L ++++ + + + +R+++ L+ I + Sbjct: 297 GQSVIFRQPERLYDAYLQKIDRLHNSLLNSIKSKLSDSRQAEMTVSHRLQTMNLLSTINR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ ++ Q + +++ Sbjct: 357 YQERLMTLNQWLNVDMQK------------------------------------------ 374 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + T L + K + RGY+ ++ + I+ ++++T + I Sbjct: 375 -----QFDQLRTRFEKAQDALLTLDTKRIVARGYSIVRQED-KIISSVKDVSTGDLLAIE 428 Query: 489 FFDGQANAIVINKA 502 DGQ V N Sbjct: 429 MRDGQIEVEVKNGN 442 >gi|85375369|ref|YP_459431.1| exodeoxyribonuclease VII large subunit [Erythrobacter litoralis HTCC2594] gi|122543430|sp|Q2N6Q7|EX7L_ERYLH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|84788452|gb|ABC64634.1| exodeoxyribonuclease VII large subunit [Erythrobacter litoralis HTCC2594] Length = 477 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 182/526 (34%), Positives = 265/526 (50%), Gaps = 55/526 (10%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + SVS LS LK VE +V +RGE+SG + +SGH Y SLKD + Sbjct: 6 AQSRAGDNAEPLSVSALSQMLKRTVEDRFGYVRLRGELSGVK-RAASGHMYCSLKDEKAV 64 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ID ++WKGT ++ F PE+G+E + GK+TT+PG SKYQI++ESL +G G LL LEK Sbjct: 65 IDGVMWKGTTARLAFQPEDGLEVIATGKLTTYPGRSKYQIVLESLEMAGEGALLALLEKT 124 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 +++L EGLF+ K P+PF+P+ I V+TSPTGAVIRDIL R++ RFP V+++PV VQG Sbjct: 125 RQRLEAEGLFARDRKRPLPFLPRTIGVVTSPTGAVIRDILHRLADRFPSHVLVWPVLVQG 184 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++++ AI +K G PRPD++I+ARGGGSIEDLW FN+EM+VRAIA+S IP+ Sbjct: 185 QGAAEQVSAAIRGFGAIKAGGEVPRPDLLIVARGGGSIEDLWSFNEEMVVRAIADSPIPV 244 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ISA+GHETD TLADYAAD RAPTPT AAE+AVPVK L ++L + AR ++R + Sbjct: 245 ISAVGHETDTTLADYAADRRAPTPTAAAEIAVPVKGELAATLNDYAARQQRGVLRPLSLG 304 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + ++ LP + L +LD L L + R+ L Sbjct: 305 RERLEARVQRLPTIETLLQPQAQKLDERVERLRGALRDRAAKGREAL--ATQRLSPTMLQ 362 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 ++ R+ + Q + + + R ++ + + + + ++ Sbjct: 363 RAEREARRKLD--QVRLAPALVER-RAARDGERLAGLSRVLATLNPRAPLERGYALVRDA 419 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ Q Sbjct: 420 DGKLVRA--------------------------------------KGEATKQA------- 434 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 R+ + F DG + + KA + KK G Q +LF Sbjct: 435 RLAVEFADGSLDVVPAGKAAAAPKRVKKSP----PPGTSGAQEDLF 476 >gi|223986294|ref|ZP_03636306.1| hypothetical protein HOLDEFILI_03616 [Holdemania filiformis DSM 12042] gi|223961733|gb|EEF66233.1| hypothetical protein HOLDEFILI_03616 [Holdemania filiformis DSM 12042] Length = 443 Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 143/493 (29%), Positives = 223/493 (45%), Gaps = 63/493 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L +LK ++ + + V V GEIS + H SGH YF+LKD SRI +++ Sbjct: 6 LSVSALVRYLKGKLDQDPLIQRVIVAGEISNFTA-HRSGHWYFTLKDEKSRISCVMFASN 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + +F+P+EG LV + F S + Q+ + ++ P+G G L E+ K++L EEGL Sbjct: 65 AARCKFIPKEGDSVLVQANTSIFEASGQLQLYVTAMKPTGLGDLYLKYEELKRRLHEEGL 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F K P+P P I VIT A +D++ ++ R+P+ +V PV VQG+ +I Sbjct: 125 FDPARKKPLPQYPMRIVVITGKNTAARQDVVTTLARRWPIAQVSEIPVLVQGEGAAAQIC 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ Q +TL D+IILARGGGSIEDLW FN+E + R +A P+I +GHE Sbjct: 185 AALRQADTL-------GFDVIILARGGGSIEDLWSFNEECVARTMAGLQTPVICGVGHEV 237 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLNS 309 D T+AD AD RAPTPTGAAEMA P +QS + +L ++ + + + Sbjct: 238 DVTIADLVADRRAPTPTGAAEMATPQLAEVQSHCLRQRQQLIYLMNQKLRQQRQRYQQQV 297 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + + L + RLD L++ + I + + + + + + Sbjct: 298 ESRIFQDPMSLLQPLQMRLDYDSSRLQNTTQR-IRGQRARLDQLSAVLLNQT-SRQVHLQ 355 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q + + + ++ KQ L + KEKI +L Sbjct: 356 QQRLGQLRLNLNHHEKQQLMLRQQQLKEKIRLL--------------------------- 388 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +++ L RGY I N + + + + I Sbjct: 389 --------------------DAYSPLKILGRGYGLI-AQNGRLVRSIQEVNVNEELRIRL 427 Query: 490 FDGQANAIVINKA 502 DGQ A+V K Sbjct: 428 HDGQIQALVKEKE 440 >gi|46907587|ref|YP_013976.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes serotype 4b str. F2365] gi|226223962|ref|YP_002758069.1| exodeoxyribonuclease VII (large subunit) [Listeria monocytogenes Clip81459] gi|254824580|ref|ZP_05229581.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J1-194] gi|254852591|ref|ZP_05241939.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL R2-503] gi|254932324|ref|ZP_05265683.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes HPB2262] gi|254994131|ref|ZP_05276321.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J2-064] gi|300765399|ref|ZP_07075381.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes FSL N1-017] gi|67460320|sp|Q71ZW1|EX7L_LISMF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|259646295|sp|C1L2R7|EX7L_LISMC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|46880855|gb|AAT04153.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes serotype 4b str. F2365] gi|225876424|emb|CAS05133.1| Putative exodeoxyribonuclease VII (large subunit) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605904|gb|EEW18512.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL R2-503] gi|293583880|gb|EFF95912.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes HPB2262] gi|293593818|gb|EFG01579.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J1-194] gi|300513836|gb|EFK40901.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes FSL N1-017] gi|328475075|gb|EGF45863.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 220] Length = 450 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + Q +E+ +K +L ++ +I Sbjct: 358 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 GQ A++ K Sbjct: 430 KMQGGQIEALITAKE 444 >gi|328467499|gb|EGF38568.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes 1816] Length = 450 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQELERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + Q +E+ +K +L ++ +I Sbjct: 358 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 GQ A++ K Sbjct: 430 KMQGGQIEALITAKE 444 >gi|332311802|gb|EGJ24897.1| Exodeoxyribonuclease 7 large subunit [Listeria monocytogenes str. Scott A] Length = 451 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 358 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + Q +E+ +K +L ++ +I Sbjct: 359 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 392 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 393 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQV 430 Query: 488 NFFDGQANAIVINKA 502 GQ A++ K Sbjct: 431 KMQGGQIEALITAKE 445 >gi|255520791|ref|ZP_05388028.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J1-175] Length = 450 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 144/495 (29%), Positives = 241/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + Q +E+ +K +L ++ +I Sbjct: 358 LQKEQMALRLQALEKAMK--------------QLLKDKQQSFFRQIDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDDIQV 429 Query: 488 NFFDGQANAIVINKA 502 GQ A++ K Sbjct: 430 KMQGGQIEALITAKE 444 >gi|254898474|ref|ZP_05258398.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes J0161] gi|254912035|ref|ZP_05262047.1| exodeoxyribonuclease VII [Listeria monocytogenes J2818] gi|254936362|ref|ZP_05268059.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes F6900] gi|258608953|gb|EEW21561.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes F6900] gi|293590001|gb|EFF98335.1| exodeoxyribonuclease VII [Listeria monocytogenes J2818] Length = 450 Score = 315 bits (806), Expect = 2e-83, Method: Composition-based stats. Identities = 141/495 (28%), Positives = 239/495 (48%), Gaps = 60/495 (12%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V V GEIS + +SGH YF++KD + + ++++ Sbjct: 5 KYLTVAAITKYIEKKFEVDPYMKQVFVHGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ LV G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 64 KAVQKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 124 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 184 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L Sbjct: 238 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQ 297 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L L R D L + IF K F+ + +R+ I+ Sbjct: 298 LKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIE 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + Q +++ +K +L ++ ++ Sbjct: 358 LQKEQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA------------ 391 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + + LKRG+ N + + L I + Sbjct: 392 ---------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQV 429 Query: 488 NFFDGQANAIVINKA 502 G +A++ K Sbjct: 430 KMQGGHIDALITAKE 444 >gi|54293801|ref|YP_126216.1| exonuclease VII, large subunit [Legionella pneumophila str. Lens] gi|81822429|sp|Q5WY82|EX7L_LEGPL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|53753633|emb|CAH15091.1| Exonuclease VII, large subunit [Legionella pneumophila str. Lens] Length = 443 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 153/496 (30%), Positives = 234/496 (47%), Gaps = 57/496 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S P +VS+L+ +K +E+ + V V GEIS SSGH YF+LKD+ ++I Sbjct: 2 SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60 Query: 69 WKGT-LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +K + + +G + + GK++ + +YQ+I+E ++ +G G L E+ K KL Sbjct: 61 FKNRHSSSLLRNFNDGQQIVASGKLSLYEARGEYQLIVEEIVEAGMGILYQRFEELKIKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+ + K +P IP+ I +ITSPTGA I+DIL ++ RFP+ R+II+P +VQG Sbjct: 121 AREGLFNPERKKTLPRIPETIGIITSPTGAAIQDILSTLARRFPIARIIIYPSEVQGQAA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P+++ NA+ NT R ++ILARGGGSIEDLW FNDE + R IA S IP++S Sbjct: 181 PQQLVNALKLANT------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHETD+T+AD+ AD RA TPT AA P L + L RL++ IIRL+K Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLVKGLQLK 294 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LN L+ + + QT+S LD L R+L + I N R++++ I Sbjct: 295 LNHLIDKIASPRQTISTYWQTLDYLERQLISAMTQFINLNINKMNLFSTRLQANNPKTQI 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + + + + Q + + +L + Sbjct: 355 ERTKIQLRQLILQLTQ--------------------------------EIRIKVNQLKHQ 382 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + LS L + RGY + N + + I Sbjct: 383 LSTNLSTL---------HAVSPLATLD------RGYAIV-SKNQRILFAAQQAQIGDTID 426 Query: 487 INFFDGQANAIVINKA 502 + G V Sbjct: 427 VRLAKGSLACEVTQIK 442 >gi|223932934|ref|ZP_03624929.1| exodeoxyribonuclease VII, large subunit [Streptococcus suis 89/1591] gi|223898380|gb|EEF64746.1| exodeoxyribonuclease VII, large subunit [Streptococcus suis 89/1591] Length = 447 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 146/497 (29%), Positives = 233/497 (46%), Gaps = 62/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R S H YFSLKD+ + I A +W G Sbjct: 5 LSVSHLTKYLKLKFDRDPYLEKVYLTGQVSNFRKRPS--HQYFSLKDDKAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F EEG++ VIG+I + + Y I+IE P G G L E+ K+ L +EGL Sbjct: 63 YKNLGFELEEGMKINVIGRIQLYEPNGSYSIVIEKAEPDGIGALAIKFEQLKQALTQEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++ K +P K I VITSP+GAVI+DI+ +S RFP + ++++P KVQGD +E+ Sbjct: 123 FKEEFKQALPRFTKKIGVITSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 ANIQRANER------DDLDVLIVGRGGGSIEDLWAFNEEIVVRAIFESRIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV K L L E R + +++ L + Sbjct: 237 DTTLADFVADKRAATPTAAAELATPVTKADLLGYLNQQENRAYQAMTNRLRFLRGQLEKI 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LDRL +L+ ++ + ++ + + R++ ++ Sbjct: 297 SQSVMFRQPERLYDGYLQKLDRLTNQLQTRMKELYSQQKQASLLLQQRLQGVHPGRKVES 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ I+++++ ++ + + Sbjct: 357 FQERIIQQERLLKSNMANIYDNKMAKA--------------------------------- 383 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + RGY I+ + I N+ + I Sbjct: 384 --------------DKLIEALTMLDTSRIVARGYAMIR-QDGRVIDSVENVQMGENLTIQ 428 Query: 489 FFDGQANAIVINKAPPK 505 DGQ + V + + Sbjct: 429 MKDGQLDVEVKHVQTDE 445 >gi|297539113|ref|YP_003674882.1| exodeoxyribonuclease VII large subunit [Methylotenera sp. 301] gi|297258460|gb|ADI30305.1| exodeoxyribonuclease VII, large subunit [Methylotenera sp. 301] Length = 408 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 121/374 (32%), Positives = 202/374 (54%), Gaps = 8/374 (2%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 ++K + +VSEL+ ++ + V GE+S +SGH YFSLKD+ ++ Sbjct: 7 LNEKQIRNGKILTVSELNRLANQVLTQSFPLFWVSGEVSNLT-RAASGHWYFSLKDSSAQ 65 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++KG + ++++P+EG + +T + +Q+ IE L +G G L A EK Sbjct: 66 VRCVMFKGRNSYLDWVPKEGDKVEARCTVTLYEARGDFQLTIEFLQRAGLGVLFEAFEKL 125 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K KL +EGLF K +P PK I ++TSP A +RD+L + R P + ++I+P VQ Sbjct: 126 KSKLQQEGLFDAAFKKSLPTHPKKIGIVTSPDAAALRDVLTTLKRRMPSIPIVIYPTPVQ 185 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G +IA+AI N E D++I+ RGGGSIEDLW FN+E++ RAIA SIP Sbjct: 186 GKGVAIQIADAIQLANERAE------CDVLIICRGGGSIEDLWQFNEEIVARAIAECSIP 239 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 IS +GHETD+T+ D+ AD+RA TPT AAE+A P +E++ +L L+ +L+ ++ + Sbjct: 240 TISGVGHETDFTICDFVADVRAATPTAAAELATPSRENILGALNQLKQQLSRMMQYQLNQ 299 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L+ L + L + Q + + +L ++ L + + K ++ + Sbjct: 300 RAQALDYLSRRLISPTQQIEQQKSQLAQMTLRLNTVMNQQVKNKQQNLLRASQNLTHLNP 359 Query: 363 IHNIQKNRQHILEK 376 + + + K Sbjct: 360 QAVLTRGYAFVQNK 373 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 58/134 (43%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 +R++IL ++Q + + ++Y ++ + + L +I + + ++ R+ Sbjct: 274 SRENILGALNQLKQQLSRMMQYQLNQRAQALDYLSRRLISPTQQIEQQKSQLAQMTLRLN 333 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +++ ++K+ ++ ++ L + L RGY +Q+ I+ + L + + Sbjct: 334 TVMNQQVKNKQQNLLRASQNLTHLNPQAVLTRGYAFVQNKLGTIISSSQQLRQGDDVTLT 393 Query: 489 FFDGQANAIVINKA 502 F G A A + Sbjct: 394 FGAGSAEATIDKTN 407 >gi|51245797|ref|YP_065681.1| exodeoxyribonuclease VII, large chain [Desulfotalea psychrophila LSv54] gi|50876834|emb|CAG36674.1| probable exodeoxyribonuclease VII, large chain [Desulfotalea psychrophila LSv54] Length = 448 Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 138/491 (28%), Positives = 228/491 (46%), Gaps = 58/491 (11%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 P YSVSE++ +K ++E + +RGEIS + SGH+YF+LKD+ ++I A+I+K Sbjct: 6 QPIYSVSEITGSIKTLLEGKFRFITIRGEISNLKT-PYSGHSYFTLKDDKAQIRAVIFKN 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++G + + G+I+ + +YQII++S+ G+G EK KK+L E G Sbjct: 65 QKRYLLDPLQDGKQVICHGRISLYEPRGEYQIIVDSIEGDGAGQFRQEFEKIKKRLEERG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 F+ K IP P+ I +I+SPTGA I+D L+ R + I PV+VQG++ +EI Sbjct: 125 YFAGSSKKNIPPYPEKIVIISSPTGAAIQDFLKIYQIRQSFTHLQILPVRVQGEQAAEEI 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI N L D+I+L RGGGSIEDLW FN+ + AI S +P+++ +GHE Sbjct: 185 AEAIRIANGL------DNIDLIVLCRGGGSIEDLWAFNEIAVAEAIHASQLPVVTGVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+T+AD+ AD RA TPTGAAEM + E L ++ R I+ I + L L Sbjct: 239 VDFTIADFCADARAATPTGAAEMLLADSEELGRKIMAYGNRQRAILGGQISFYQQKLKRL 298 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 K+L + ++ S + L+ + + + R+ + R+K++ +H I + Sbjct: 299 TKSLSLIEYSVEQSSHHLELTISYFKQAMLSSMERREQKLQQGSERLKAEAPLHKIILQK 358 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + + +++ ++ L + ++ Sbjct: 359 QRVENLKHRLKRQIRHSLDEKKGQFSQQA------------------------------- 387 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT---SIQDTNNNFITQKRNLATKTRILI 487 +L S + TL RGY I I+ + I + Sbjct: 388 ----------------ALLNSVSPLATLSRGYAVARIISTGRKEIISNSTQVKEGQEINV 431 Query: 488 NFFDGQANAIV 498 G + + Sbjct: 432 LLGQGSLDCKI 442 >gi|313897496|ref|ZP_07831039.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. HGF2] gi|312957866|gb|EFR39491.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. HGF2] Length = 442 Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 128/496 (25%), Positives = 222/496 (44%), Gaps = 59/496 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + YSVS L +++K +++++ + ++GEIS + H SGH YF+LKD S+I + Sbjct: 1 MSQNVYSVSALVHYIKQTLDNDIRIQSILIKGEISNFTN-HRSGHWYFTLKDARSKISCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + L +EG++ +V ++ + Q+ + ++ G G L LE+ KKKL Sbjct: 60 MFSSHARRCNILLKEGMKVIVTASVSMYEAGGSVQLYVTAVRSDGLGDLFLQLEEVKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +GLF Q K P+P P I VIT+ TGA ++DIL IS R+PL V+++P VQG + Sbjct: 120 AAQGLFDPQKKKPLPQYPMRIGVITAKTGAAVQDILTTISRRWPLAEVVVYPSLVQGIQA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I + + + D+I+LARGGG IEDLW FN+E + RA+ I++ Sbjct: 180 SGAIVENLRKADQ-------GGHDVILLARGGGPIEDLWCFNEEAVARAVFAMHTVIVTG 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL DY +D RAPTPT AAE+ P E ++ ++ + RL + + Sbjct: 233 VGHETDTTLVDYVSDARAPTPTAAAELITPDLEEVRMNVSLMRRRLVKDMETRLHMAKQA 292 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + RY D L E ++ + + + + + + + + Sbjct: 293 LEP-----------IRSHRYMRDPLSYIREEEMK--LAMHVQQLSIVEATVAAMAM--QL 337 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++N + + + Q + + L R+ + L R Sbjct: 338 KQNSHKLAIHSERLFQKNTRSIAESRL------------------RLTQALHNYDTLRKR 379 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + +L +++ +L RGY + I+ + R+ Sbjct: 380 --------------QIGNISALLDAYSPLKSLSRGYAIAYHGD-EVISSVDAVEQNDRLR 424 Query: 487 INFFDGQANAIVINKA 502 + DG + K Sbjct: 425 LRMQDGYLYTNIEKKE 440 >gi|46579757|ref|YP_010565.1| exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris str. Hildenborough] gi|46449172|gb|AAS95824.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio vulgaris str. Hildenborough] gi|311233548|gb|ADP86402.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio vulgaris RCH1] Length = 465 Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 124/510 (24%), Positives = 212/510 (41%), Gaps = 76/510 (14%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++V EL+ ++ +E +V V+G++S SSGH YF+LKD + ++ + ++G+ Sbjct: 4 VFTVRELTRAIRDAIEGGFPYVWVQGQVSNL-SRPSSGHLYFTLKDEEAALNCVWFRGSQ 62 Query: 74 N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 + G E L G++T + YQ+++E +G G Sbjct: 63 RDAETFDPLTGEVFEDGPRPGLSRTVRNGQELLCAGRLTVYAPRGGYQLVVEMAQDAGLG 122 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLR 173 L A E+ K++L +G F+ + K P+P P+ +AV+T+P GA I D L+ R Sbjct: 123 RLHLAFEELKRRLSAKGYFAVERKRPLPRSPRRVAVVTAPRGAAIHDFLRIAGERGVGCE 182 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 + I PV VQG E P + E ++I++ RGGGS+EDLW FNDE + Sbjct: 183 IRIHPVPVQGAEAPP------RIAAAIAEAGRLGCAEVIVVIRGGGSLEDLWAFNDEAVA 236 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 AI S +P+++ +GHE D+T+AD AD+RA TP+ AA++ + L LE RL+ Sbjct: 237 DAIYASPVPVLAGVGHEVDFTMADMTADVRAATPSHAAQLLWRERREFVQGLDELEMRLS 296 Query: 294 NIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 R L +L +AL + + L R L E + + Sbjct: 297 RAFDRAFTTGEGRLAALERALGWLSPVRALDRYDERFAESASRLARAWEAGSRLRSQRVE 356 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 ++ ++ F ++K + + + Sbjct: 357 QLVAALRHSFGPEALEKRQARLQTLHASL------------------------------- 385 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 I T + + R V L + + L+RGY+ ++ + Sbjct: 386 -IHAGQTQLNTVERR---------------VENLGVRLAALDPEAPLQRGYSLVRGPDGR 429 Query: 472 FITQKRNLATKTRILINFFDGQANAIVINK 501 F+ R A R+ I DG+ +V + Sbjct: 430 FLKSIREAAPGQRLDIVLHDGEVGTVVTSV 459 >gi|269962402|ref|ZP_06176752.1| exodeoxyribonuclease VII large subunit [Vibrio harveyi 1DA3] gi|269832898|gb|EEZ87007.1| exodeoxyribonuclease VII large subunit [Vibrio harveyi 1DA3] Length = 376 Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 122/362 (33%), Positives = 201/362 (55%), Gaps = 10/362 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ Sbjct: 21 SQTNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCA 79 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++G ++ F P G + LV +++ + YQ+IIES+ P G G L E K KL Sbjct: 80 MFRGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEALKMKL 139 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF+ +K P+P P+ + VITS TGA + DIL + R P L V+++P VQG+E Sbjct: 140 AAEGLFAQTNKQPLPEHPRRVGVITSKTGAALYDILDVLKRRDPSLPVVVYPTMVQGEEA 199 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA Sbjct: 200 AIQIAQAIGRANSRDE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISA 253 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D T+AD+ AD+RAPTP+ AAE+ H +L+ + +L + + + + Sbjct: 254 VGHEVDVTIADFVADMRAPTPSAAAELVSRDNSHKDQALVTRQHKLTSAMRYYLAQQKQQ 313 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ L + L +LD L L+ ++ I + + +R++ + + Sbjct: 314 SAQLMHRLERQHPSYQLQRQTQQLDELEMRLQRAMQRFITTRQQAVERKHHRLQLNSPVK 373 Query: 365 NI 366 + Sbjct: 374 RL 375 Score = 52.1 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 34/95 (35%), Gaps = 2/95 (2%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + Q ++ +Q + ++ +L + + + L R+ ++ + +L Sbjct: 283 RDNSHKDQALVTRQHKLTSAMRYYLAQQKQQSAQLMHRLE--RQHPSYQLQRQTQQLDEL 340 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 R++ + I + +V LQ + L Sbjct: 341 EMRLQRAMQRFITTRQQAVERKHHRLQLNSPVKRL 375 >gi|47095944|ref|ZP_00233547.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes str. 1/2a F6854] gi|47015690|gb|EAL06620.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes str. 1/2a F6854] Length = 444 Score = 313 bits (802), Expect = 4e-83, Method: Composition-based stats. Identities = 141/492 (28%), Positives = 239/492 (48%), Gaps = 60/492 (12%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+ ++ +++ E + V V GEIS + +SGH YF++KD + + ++++ + Sbjct: 2 TVAAITKYIEKKFEVDPYMKQVFVHGEISNLK-QPASGHLYFTVKDEFAMLRSVMFHKAV 60 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 KI F+PE+G+ LV G+I F + +YQ E + P G G L LE+ K +L +EGLF Sbjct: 61 QKIGFVPEDGMNVLVTGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKAQLEKEGLF 120 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 ++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++I Sbjct: 121 AETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQKIVE 180 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GHETD Sbjct: 181 NIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGHETD 234 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D++AD+RA TPT AAE+AVP L+ L + RL + + ++ K +L L + Sbjct: 235 FALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQLKQ 294 Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L L R D L + IF K F+ + +R+ I+ + Sbjct: 295 HLILNGPKHQLEQQMERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIELQK 354 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + Q +++ +K +L ++ ++ Sbjct: 355 EQMTLHLQALDKAMK--------------QLLKDKQQSFFRQVDA--------------- 385 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L+ + + LKRG+ N + + L I + Sbjct: 386 ------------------LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQVKMQ 426 Query: 491 DGQANAIVINKA 502 G +A++ K Sbjct: 427 GGHIDALITAKE 438 >gi|327398311|ref|YP_004339180.1| Exodeoxyribonuclease 7 large subunit [Hippea maritima DSM 10411] gi|327180940|gb|AEA33121.1| Exodeoxyribonuclease 7 large subunit [Hippea maritima DSM 10411] Length = 488 Score = 313 bits (802), Expect = 4e-83, Method: Composition-based stats. Identities = 142/497 (28%), Positives = 237/497 (47%), Gaps = 16/497 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSS-GHAYFSLKD-NHSRIDAI 67 + Y+VS+++ +K IVE N ++ V GE+ SS GH YF+LK+ + + + + Sbjct: 1 MSAERYTVSQITNLIKEIVEGNFHNIWVEGEVD--SARPSSTGHLYFTLKEKDKASLKCL 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 I+K TL K++ LP++G + L G ++ +P S +Y++I+E +G G +K K++L Sbjct: 59 IFKSTLKKLKKLPQDGKQILAFGSLSIYPPSGEYRLIVEYFQDAGIGDKFIEFQKAKEEL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDEC 186 +G FS + IP+ PK I ++TS TGA +RDI+ I R F ++I+P+ VQG+ Sbjct: 119 KAKGYFSRKRP--IPYNPKRIVLLTSTTGAAVRDIINIIKRRGFDTELLIYPITVQGESA 176 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I AI Q+N++KE D+++++RGGGS EDLW FND+ I + N P ISA Sbjct: 177 KRSILTAIRQINSIKES-----VDVVVISRGGGSSEDLWVFNDKEIAENLFNIKFPTISA 231 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGH+ D TL D ADLR TP+ AAE+ + + +L NL+ L+ I I K Sbjct: 232 IGHQIDITLCDMVADLRVETPSAAAEVLTNWQFKARENLYNLKRILDTSINHTISAKKEK 291 Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L S + + +D++ + N+ ++ K + + I + Sbjct: 292 LKLFSPKSHYLRVNSIIVNHTMHIDKIAENISSNILHLLKTKEKRMLLLKEVIYKNNPSE 351 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ +Q I ++ + Q + + + I+ +I + I L Sbjct: 352 KIKLTKQKINHLKESLPQFLNSLIHQKRNQLNRYSRIIAE--YSLSEKINLFNQKIVFLN 409 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 I + + + + L + KN LKRGY+ D N I N+ Sbjct: 410 KAINRNSRQILNHKLSIIKMEKSRLNNLNPKNILKRGYSITFDENKKPILSVENIKKGQT 469 Query: 485 ILINFFDGQANAIVINK 501 I G+ + V Sbjct: 470 ITTLVGKGRIISTVKET 486 >gi|116629409|ref|YP_814581.1| exonuclease VII, large subunit [Lactobacillus gasseri ATCC 33323] gi|311110940|ref|ZP_07712337.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri MV-22] gi|122273653|sp|Q044H9|EX7L_LACGA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|116094991|gb|ABJ60143.1| Exodeoxyribonuclease VII large subunit [Lactobacillus gasseri ATCC 33323] gi|311066094|gb|EFQ46434.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri MV-22] Length = 456 Score = 313 bits (802), Expect = 5e-83, Method: Composition-based stats. Identities = 150/508 (29%), Positives = 240/508 (47%), Gaps = 59/508 (11%) Query: 10 LDHPEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 D+P Y SVS+L++++ +++ L V ++GE+S +R S H YFSLKD+ S+I+ Sbjct: 2 ADNPVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMHS-HQYFSLKDDKSKINV 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++++ K++F PEEG++ V G + + YQ +++ P+G G L L + ++K Sbjct: 61 VMFRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L +EGLF++ HK +P P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE Sbjct: 121 LAKEGLFNEDHKKRLPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I ++ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS Sbjct: 181 AADTIVASLKQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVIS 235 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 ++GHETD TLAD AD RA TPT AAE A P + + ++ L ARL + I+ K Sbjct: 236 SVGHETDTTLADLVADARAATPTAAAEYATPNLADVLTKIVQLRARLYAAMQANIRAKRQ 295 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L K L + ++D L L + + + R+K+ Sbjct: 296 ILDRLRKAPVLQEPTRIYDQQIQQVDMLSHRLNQAISNQLQHDRSSVRLLQERLKALNPG 355 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +EQ+ ++ + A L Sbjct: 356 R--------------RLEQLERERTFIVANLFSTMTAYL--------------------- 380 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 K ++ T + L + T+ RGY D N +T L Sbjct: 381 ------------KDQRNKLNRTMQQLDDISPLKTIGRGYVYTTDQEGNTVTSVDKLEIDE 428 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511 ++ ++F DGQ V N K+ +K Sbjct: 429 KLKLHFKDGQVQVNVENIRREKDGNQEK 456 >gi|212703018|ref|ZP_03311146.1| hypothetical protein DESPIG_01056 [Desulfovibrio piger ATCC 29098] gi|212673606|gb|EEB34089.1| hypothetical protein DESPIG_01056 [Desulfovibrio piger ATCC 29098] Length = 497 Score = 313 bits (801), Expect = 6e-83, Method: Composition-based stats. Identities = 126/511 (24%), Positives = 216/511 (42%), Gaps = 53/511 (10%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK-GT 72 SV+EL+ ++ +E V VRGEI SGH YF+LKD +++ + ++ Sbjct: 10 ILSVTELTDRMRRTLEGTFPFVWVRGEIGEL-SFPGSGHIYFTLKDAGAQLQCVWFRDRQ 68 Query: 73 LNKIEFLP-----------------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115 + F P +G E G+I+ + +YQ+I+E + G G Sbjct: 69 MRGRNFDPLTGEIFAEPRPDPVRLLRQGSELFCAGQISVYGPRGRYQLIVELVQAGGQGL 128 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRV 174 L A E+RK+ L G F+ + K P+P P +A++TSP GA I D ++ S R V Sbjct: 129 LAQAFEERKQALAARGFFAAERKRPLPASPSRVALVTSPAGAAIHDFMELASVRGLGAEV 188 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FPV+VQG+ +I A+ ++N + + ++ RGGGS+EDLW FN+E + Sbjct: 189 RLFPVRVQGEGAAGQICRALDEINRQGWAQ------VAVIIRGGGSLEDLWCFNEEEVAT 242 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 AI S IP+++ IGHE D TLAD AD+RA TP+ AA++ P++ L L L Sbjct: 243 AIFASKIPVLAGIGHEVDVTLADMTADVRAATPSHAAQLLWPLRREYWQRLDELSLALER 302 Query: 295 IIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 ++ + + L + L + + L + +L + + L E ++ + + H Sbjct: 303 ARQGWLQRQEDRLRRCERGLRLCSPARRLEGAELQLRQWQQRLLQAGERLLRDREQRLQH 362 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 R+++ + +Q + +Q + +R ++ L L ++ +R Sbjct: 363 SQERLRALTGPGRLAHLQQRLALLEQKVGNAAHLLVRGREQVVRDYTRDLARLGQEAASR 422 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + L + L RGY ++ Sbjct: 423 -------------------------RGHELECLELRLAACNPLAPLGRGYAVVRTAKGRV 457 Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + I DG+ A V P Sbjct: 458 LASAGQGRAGQDVRILLQDGELEARVTAVHP 488 >gi|81428292|ref|YP_395292.1| exodeoxyribonuclease VII large subunit [Lactobacillus sakei subsp. sakei 23K] gi|123728662|sp|Q38XU8|EX7L_LACSS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|78609934|emb|CAI54981.1| Exodeoxyribonuclease VII, large subunit [Lactobacillus sakei subsp. sakei 23K] Length = 449 Score = 313 bits (801), Expect = 6e-83, Method: Composition-based stats. Identities = 149/497 (29%), Positives = 232/497 (46%), Gaps = 60/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK E + L V + GEIS +R ++ H YFSLKDN ++I AI++K Sbjct: 8 LTVTALTQYLKAKFERDPYLDRVYLTGEISNFRLRPNA-HQYFSLKDNKAKISAIMFKSA 66 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F PEEG++ L++G+I+ + S YQI +E + P G G L A E+ K KL EGL Sbjct: 67 FEKVKFTPEEGMKVLIVGRISLYEASGNYQIYVERMEPDGLGALYQAYEQLKAKLATEGL 126 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + P+ PK IAVITSP+GAVIRDI+ R+P+ ++++FP VQGD + Sbjct: 127 FDAPKQ-PLVRFPKRIAVITSPSGAVIRDIITTTQRRYPIAQLVLFPAVVQGDGAADVLV 185 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + Q+N D II+ RGGGSIEDLW FN+E + RAI S IP+IS++GHET Sbjct: 186 ERLKQVN------EHGDFDTIIIGRGGGSIEDLWPFNEERVARAIVASQIPVISSVGHET 239 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQ--SSLINLEARLNNIIIRLIKYKINTLNS 309 D T+AD AD+RA TPT AAE+A PV L + K Sbjct: 240 DTTIADLVADVRAATPTAAAELATPVLTDEILKLQQQRLRLYQAFSKTVALNKKQLDHLQ 299 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + +D+L R L + ++ + + + R+ + + +++ Sbjct: 300 NSYVLKQPKRLYDGYLQNVDQLQRRLLTAQQQLLKDRRQQVQLLQQRLMAQSPLMAVRQA 359 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++ + E+Q+ + Q + L R Q ++ Sbjct: 360 QKDVTEQQRRLNQAM---------------NRLMADRRQKAAQV---------------- 388 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L + L RG+ + D + + + T+ I ++ Sbjct: 389 ----------------IAALDLVSPLKILGRGFAYVTDDQQQMLKKVADFKTQQPIELHV 432 Query: 490 FDGQANAIVINKAPPKE 506 DG A V+ +E Sbjct: 433 QDGLVTAEVVATHKGEE 449 >gi|134298936|ref|YP_001112432.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum reducens MI-1] gi|134051636|gb|ABO49607.1| Exodeoxyribonuclease VII large subunit [Desulfotomaculum reducens MI-1] Length = 398 Score = 313 bits (801), Expect = 6e-83, Method: Composition-based stats. Identities = 127/361 (35%), Positives = 201/361 (55%), Gaps = 12/361 (3%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 SVS+L+ ++K +ES+ L+++ V+GEIS + +HSSGH Y +LKD + ++++ Sbjct: 2 KILSVSDLTKYIKRKLESDSFLANIWVKGEISNLK-LHSSGHIYLTLKDKECCLKVVMFR 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + F PE G+ ++ G ++ + YQ+ E++ P G G L ALE+ K+KL + Sbjct: 61 SRARGLVFRPENGMSVIIQGYLSVYERDGSYQLYAEAMEPDGVGALYIALEQLKQKLSAQ 120 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G F + K PIP +PK+I ++TSPTGA I+D+L I R+P + +I+ PV VQG+ Sbjct: 121 GYFDKERKRPIPRVPKVIGIVTSPTGAAIQDMLNIIGRRWPNVHIIVAPVLVQGEGAANS 180 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I+ I+Q+N L D+II+ RGGGS+E+LW FN E + AI S IP+ISA+GH Sbjct: 181 ISRGIIQMNHL------GTVDVIIVGRGGGSLEELWAFNTEAVAMAIVQSKIPVISAVGH 234 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+T+AD ADLRAPTP+ AAE+ VP + + L LE RL + ++ + Sbjct: 235 ETDFTVADMVADLRAPTPSAAAELVVPDGKEMSRYLETLEKRLAKGMGGYLERAQQRVVK 294 Query: 310 LLKALPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + LD L L ++ I + ++ ++ + + Sbjct: 295 CLAIPSMQRPFLITGNRQQTLDTLTSNLYRAGKLCIADRTTQLANLAGKLNVLSPLATLS 354 Query: 368 K 368 + Sbjct: 355 R 355 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 14/136 (10%), Positives = 41/136 (30%), Gaps = 2/136 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ +++ ++ + +++ + ++ + L + Sbjct: 264 KEMSRYLETLEKRL--AKGMGGYLERAQQRVVKCLAIPSMQRPFLITGNRQQTLDTLTSN 321 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + I T ++ L + TL RGY T ++ + +A + Sbjct: 322 LYRAGKLCIADRTTQLANLAGKLNVLSPLATLSRGYGICTTTGGEIVSDTKGVAVGQTVQ 381 Query: 487 INFFDGQANAIVINKA 502 + G+ V K Sbjct: 382 VVLHKGKLLCQVEEKT 397 >gi|326803322|ref|YP_004321140.1| exodeoxyribonuclease VII, large subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326650635|gb|AEA00818.1| exodeoxyribonuclease VII, large subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 461 Score = 312 bits (800), Expect = 8e-83, Method: Composition-based stats. Identities = 150/513 (29%), Positives = 238/513 (46%), Gaps = 66/513 (12%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58 MN + SVS+L+ ++K + + + V + GE+SG+R + H YF LK Sbjct: 1 MNDAQDQ------YLSVSQLTKYIKAKFDRDPYMQSVHLVGEVSGFRNRGKNKHQYFGLK 54 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D+ + I AII++GT +K F E+G++ VIG+++ + + +Y III+ + P G G Sbjct: 55 DDDAYISAIIFRGTFSKHNFDLEDGMKVQVIGRLSLYEKTGRYSIIIDHIQPDGIGQFYV 114 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 E+ K+KL EEGLF+ + PIP PK IAV+TSP+GAVIRDI+ R+P ++++++ Sbjct: 115 RFEQLKQKLGEEGLFTFE-AKPIPKYPKRIAVVTSPSGAVIRDIITTARRRYPVVQIVLY 173 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P VQG E K I I + + D II+ RGGGSIEDLW FN+E +VRAIA Sbjct: 174 PTVVQGQEAAKSIVRNIER------ADSSGAYDTIIVGRGGGSIEDLWCFNEEEVVRAIA 227 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P+IS+IGHETD TL+DY +D RA TPT AAE+A PV L ++ + + RL I + Sbjct: 228 ACQTPVISSIGHETDTTLSDYVSDQRAATPTAAAELATPVLNDLVFTINDYKQRLIQIQL 287 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + Y L + + ++ R +L L L + ++++ R I + Sbjct: 288 NRLNYFKQRLEQVKSSYLFKQPEKMYDGYRLKLADLDSRLNDLVSNKVYQEERRLRQIQS 347 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 ++ + +N+ + + + Q + Sbjct: 348 ELQGLSPKVLVLENKHKLASLGESLRQGQG-------------------------QLLER 382 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 H ++ L + L GY + N I Sbjct: 383 KHYQLQ----------------------QLAGKLDLLSPLKRLSGGYVYL-SKNQVPIES 419 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 +A ++ + DG N+ +I QP Sbjct: 420 VDQVAIGDKVQLRLADGYLNSQIIGSKKEALQP 452 >gi|332704075|ref|ZP_08424163.1| Exodeoxyribonuclease 7 large subunit [Desulfovibrio africanus str. Walvis Bay] gi|332554224|gb|EGJ51268.1| Exodeoxyribonuclease 7 large subunit [Desulfovibrio africanus str. Walvis Bay] Length = 459 Score = 312 bits (799), Expect = 9e-83, Method: Composition-based stats. Identities = 130/508 (25%), Positives = 214/508 (42%), Gaps = 72/508 (14%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + V EL+ LK +VE V V+G++S SGH YFSLKD + + + +K Sbjct: 4 IFRVRELTQALKDVVEGQFPFVWVKGQVSNL-SRPGSGHIYFSLKDEEAVLSVVWFKS-N 61 Query: 74 NKI-----------------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 + + EEG + L G++T +P YQ++ E + G G L Sbjct: 62 QWLGGEGCVNPLTGEICEGPPLMLEEGKDVLCAGRLTVYPPRGTYQLVAELVQERGVGRL 121 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVI 175 A E K+ L +G F K +P P+ +AV+T+P GA IRD L S R ++ Sbjct: 122 YQAFEALKQDLQAKGYFDQDRKMVLPRHPQRVAVVTAPGGAAIRDFLCIASERGLSSQIR 181 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 I PV VQGD P +IA A+ +N ++++L RGGGS+EDLW FN + + A Sbjct: 182 IHPVLVQGDLAPAQIAQALEAINADGWA------EVVVLIRGGGSLEDLWAFNTKRVADA 235 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 + S IP+++ IGHE D T+AD AD RA TPT AA++ P + L + +LE Sbjct: 236 LYASRIPVLAGIGHEVDTTIADMVADRRAATPTHAAQILWPERRELLQMVDDLE------ 289 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 L +DR H ++ Sbjct: 290 -------------------IRLQARLKDCMQEMDR------------------HVAVLVK 312 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 + + +++ + + ++ + Q +R +A L R+ +R Sbjct: 313 ALGWLSPVRRMERMEERLKHDRERLSMSAWQMMRRKQDILGSLVAALG--RQYGSDRWAM 370 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFIT 474 L ++ L R+ + + + + + L+S + L RGY+ ++ F+ Sbjct: 371 LGGRVELLSMRLAEGGKRALDTVDSDLRMMETRLESLDPEKPLARGYSLVRVERTGRFLR 430 Query: 475 QKRNLATKTRILINFFDGQANAIVINKA 502 ++A R+ I G A+V+ Sbjct: 431 DPDDVAPDDRLEIRVSKGLVPAVVVKGK 458 >gi|303247301|ref|ZP_07333575.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio fructosovorans JJ] gi|302491460|gb|EFL51348.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio fructosovorans JJ] Length = 478 Score = 312 bits (799), Expect = 9e-83, Method: Composition-based stats. Identities = 123/515 (23%), Positives = 205/515 (39%), Gaps = 74/515 (14%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + VSEL+ +K +VES V VRG++ SGH YFSL+D + + + ++G Sbjct: 4 VFEVSELTRSVKDVVESEFPFVWVRGQVVNL-SRPGSGHLYFSLRDAEASLAVVWFRGAQ 62 Query: 74 --------------------NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + +G+E +V G++T + YQ++ E + G Sbjct: 63 GGKALAGGGRYDPLTGEVFEESLAKSLADGMEIMVAGRLTVYAPRGVYQLVAELVQEVGE 122 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPL 172 G L E KK+L +G F+ + K +P P +AV+T+P GA +RD ++ R Sbjct: 123 GRLWQEFEALKKELAAKGYFAQERKRALPRHPLRVAVVTAPAGAAVRDFIRIGRERGHGA 182 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 V I+P VQGD P I A+L+ + ++++L RGGGS+EDLW FN + Sbjct: 183 AVRIYPTLVQGDAAPVGIVRAMLRAVSDDWA------EVLVLIRGGGSLEDLWAFNTPEV 236 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 AI S +P+++ +GHE D T+AD AD+RA TP+ AA++ P + L L +LE Sbjct: 237 AGAIFASPLPVVTGVGHEVDVTIADMVADVRAATPSHAAQLLWPERAQLTQRLDDLEMAA 296 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 + RL+ + L +L + L R RL RL + Sbjct: 297 RRGMARLVAMRERELVALARGLAWLSP-----RQRLARLDESFAGAAARLTRAGNGWLGK 351 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 R+ + Q + +++ + + Sbjct: 352 FAARLDAVAAKMAGQYGPHSLEAREESLSRR----------------------------- 382 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NN 471 R+ L + + + L L RGY+ + Sbjct: 383 -----------TERLGNALRFFLAGRENRLDLAAAELAGLDPMGPLARGYSLTTLSRTGK 431 Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 F+ + + + I + G+ A V + AP Sbjct: 432 FLRRAGDARPGDNLSIMVYAGRVEARVTDVAPAPA 466 >gi|238852558|ref|ZP_04642968.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri 202-4] gi|238834704|gb|EEQ26931.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri 202-4] Length = 456 Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 149/508 (29%), Positives = 238/508 (46%), Gaps = 59/508 (11%) Query: 10 LDHPEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 D+P Y SVS+L++++ +++ L V ++GE+S +R S H YFSLKD+ S+I+ Sbjct: 2 ADNPVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMHS-HQYFSLKDDKSKINV 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++++ K++F PEEG++ V G + + YQ +++ P+G G L L + ++K Sbjct: 61 VMFRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L +EGLF++ HK +P P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE Sbjct: 121 LAKEGLFNEDHKKRLPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I ++ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS Sbjct: 181 AADTIVASLKQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVIS 235 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 ++GHETD TLAD AD RA TPT AAE A P + + ++ L ARL I+ K Sbjct: 236 SVGHETDTTLADLVADARAATPTAAAEYATPNLADVLTKIVQLRARLYAATQANIRAKRQ 295 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L K L + ++D L L + + + R+K+ Sbjct: 296 ILDRLRKAPVLQEPTRIYDQQIQQVDMLSHRLNQAMSNQLQHDRSSVRLLQERLKALNPG 355 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +EQ+ ++ + L R Sbjct: 356 R--------------RLEQLERERTFIVANLFSTMTTYLKDQR----------------- 384 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ T + L + T+ RGY D N +T L Sbjct: 385 ----------------NKLNRTMQQLDDISPLKTISRGYVYTTDQEGNTVTSVDKLKIDE 428 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511 ++ ++F DGQ V N K+ +K Sbjct: 429 KLKLHFKDGQVQVNVENIRREKDGNQEK 456 >gi|238854803|ref|ZP_04645133.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 269-3] gi|260664034|ref|ZP_05864887.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii SJ-7A-US] gi|282933881|ref|ZP_06339229.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 208-1] gi|238832593|gb|EEQ24900.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 269-3] gi|260561920|gb|EEX27889.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii SJ-7A-US] gi|281301970|gb|EFA94224.1| exodeoxyribonuclease VII, large subunit [Lactobacillus jensenii 208-1] Length = 453 Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 134/501 (26%), Positives = 236/501 (47%), Gaps = 58/501 (11%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 SVS+L+Y++ +++ L V ++GE+S +R +S H YFSLKD ++I+ ++++ Sbjct: 6 KYLSVSDLNYYINLKFKNDPYLHQVFLKGELSNFRYRRNS-HQYFSLKDEKAKINVVMFR 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 K++F PEEG++ V G I +P YQ +++ P+G G L L + ++KL +E Sbjct: 65 SAFEKLKFKPEEGMKVYVSGYIGVYPPQGSYQFYAQTMEPAGLGELYERLRQLQEKLSKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ +HK +P P IAV+TS +GAVI DI+ + RFP + +FP +VQG+ Sbjct: 125 GLFAAEHKKRLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGETAAAS 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + NA+ Q+ + D++I+ RGGGS+EDLW FN+E +VR++ + +P+IS++GH Sbjct: 185 LVNAMEQIKERADE-----YDVMIIGRGGGSLEDLWPFNEEEVVRSVYSMPMPVISSVGH 239 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD TL D AD RA TPT AAE A P + L L++RL + I+ + L Sbjct: 240 ETDTTLCDLVADARAATPTAAAEYATPNLSDELAGLHQLQSRLLTSMQSCIRERKQALQR 299 Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + +D+L L +++I+ ++ ++ + ++ Sbjct: 300 IQNSPIMREPMRLYDQQAQSVDQLAGRLMQIIKVILQNNRQNLKISEQKLLAQSPKRLLE 359 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + +Q Q + +K L+ ++ Sbjct: 360 RTKQSNDYLNQRLFSAMKTFLKDKRTLFQQ------------------------------ 389 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + L+ + L RGY + + +N+A + + Sbjct: 390 -----------------QVQTLEDISPLKVLGRGYIYTSNQAGETVMSVKNIAKDEVLNL 432 Query: 488 NFFDGQANAIVINKAPPKEQP 508 +F DG A A ++ + Sbjct: 433 HFADGNAEAKILEVEDNENAK 453 >gi|89069372|ref|ZP_01156731.1| exodeoxyribonuclease VII, large subunit [Oceanicola granulosus HTCC2516] gi|89045139|gb|EAR51210.1| exodeoxyribonuclease VII, large subunit [Oceanicola granulosus HTCC2516] Length = 420 Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 158/420 (37%), Positives = 237/420 (56%), Gaps = 7/420 (1%) Query: 1 MNPFSQ-KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ + + + E++VSE+S +K +E + VRGE+ G SGH YF +KD Sbjct: 1 MDLIDEPQPGRNLAEFTVSEISGAVKRALEDQFGRIRVRGEV-GRVFKARSGHLYFDVKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + S + IW+G L + +PEEG+E +V G+++ F G SKY +I++ + +G G L+ Sbjct: 60 DKSVLACNIWRGQLAGLSVMPEEGLEVVVTGRLSAFGGQSKYNMIVDEVAVAGVGALMAM 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 EKRKK L EGLF+ + K P+P++P++I V+TSP GAVIRDIL R+ RFP +V+++PV Sbjct: 120 FEKRKKALEAEGLFAPECKRPLPYLPEVIGVVTSPQGAVIRDILHRLRERFPRKVLVWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG C E+A AI N L G PRP+++I+ARGGGSIEDLW FN+E + RA A S Sbjct: 180 AVQGKACAPEVARAIAGFNALTPGGALPRPELLIVARGGGSIEDLWGFNEEAVARAAAAS 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP+ISA+GHETD TL D+ AD RAPTPT AAEMAVPV+ L + ARL+ + + Sbjct: 240 TIPLISAVGHETDTTLIDHVADRRAPTPTAAAEMAVPVRLELLGWVDGQAARLSRALGQG 299 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L L + L + L R D R L L + RK F+H ++ Sbjct: 300 LLGRGQRLRDLGRVLGRPEALLERPSQRFDGQERRLVGALRGAMDRKRARFSHAAGALRP 359 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + R+ + + + + + +R ++ + R + + L Sbjct: 360 GAVRGRVADGRRRLGDCGGRLVPALGRGVR-----QRRRDYEACAGRLAPERLLVRLGQR 414 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 9/99 (9%), Positives = 27/99 (27%), Gaps = 13/99 (13%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + + Q L + +++ L + + + + R+ L Sbjct: 285 VDGQAARLSRALGQG----LLGRGQRLRDLGRVLGRPEALLERPSQRFDGQERRLVGALR 340 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 + S L+ RG + + Sbjct: 341 GAMDRKRARFSHAAGALR---PGAV--RG----RVADGR 370 >gi|29654546|ref|NP_820238.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii RSA 493] gi|29541813|gb|AAO90752.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii RSA 493] Length = 414 Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats. Identities = 124/381 (32%), Positives = 218/381 (57%), Gaps = 10/381 (2%) Query: 1 MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ ++ SL+ Y+VS+L+ + ++E + + GEIS +SGH YFSLK Sbjct: 1 MSLLKEEISLNAETTIYTVSQLNTEARLLLEERFQKIWITGEISNL-SRPASGHLYFSLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D +++ ++ ++ F PE G LV +I+ + +Q+I+ + +GSG L Sbjct: 60 DERAQVRCAFFRNYHRQLNFNPENGHHVLVQAEISLYEARGDFQLIVTQMQAAGSGALQI 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 A EK K++L +EGLF+ ++K PIP P I VITS +GA IRD+L+ ++ RFP + +I++ Sbjct: 120 AFEKLKQRLEKEGLFAPENKKPIPLFPTTIGVITSSSGAAIRDVLKVLNRRFPTISIIVY 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P VQGD+ ++IA+AI + ++ KE D++++ RGGGS+EDLW FN+E + RAI Sbjct: 180 PSLVQGDKAAEQIAHAIKKADSRKE------CDVLLVVRGGGSLEDLWPFNEERVARAIF 233 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + IP+++ +GHE D+T+AD+ AD RA TP+ AAEM P ++ + + + RL + I Sbjct: 234 SCEIPVVTGVGHEIDFTIADFVADHRAATPSAAAEMVSPNRKEWLQHVHSFQRRLQHFIN 293 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 +++ L L+ L DQ L R +++ L L ++ R++++ + Sbjct: 294 THLRHYQLQLRHLITRLQRPDQRLESQRRQIEALQHRLMMAMDYDFNRRHQNLAAKAQAL 353 Query: 358 KSDFLIHNIQKNRQHILEKQQ 378 ++ + +++ + + Q Sbjct: 354 QTMSPLTTLKRGYAIVTHQNQ 374 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 1/143 (0%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + NR+ L+ ++ ++ + + ++ L ++ R+ Sbjct: 263 PSAAAEMVSPNRKEWLQHVHSFQRRLQHFINTHLRHYQLQLRHLITRLQRPDQRLESQRR 322 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 I+ L R+ + + H +++ + LQ+ + TLKRGY + N + + + Sbjct: 323 QIEALQHRLMMAMDYDFNRRHQNLAAKAQALQTMSPLTTLKRGYAIVTHQN-QIVRKAQA 381 Query: 479 LATKTRILINFFDGQANAIVINK 501 L +I +GQ + V Sbjct: 382 LKVGDKITARVAEGQLDCRVEKI 404 >gi|257063923|ref|YP_003143595.1| exodeoxyribonuclease VII, large subunit [Slackia heliotrinireducens DSM 20476] gi|256791576|gb|ACV22246.1| exodeoxyribonuclease VII, large subunit [Slackia heliotrinireducens DSM 20476] Length = 519 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 115/495 (23%), Positives = 197/495 (39%), Gaps = 17/495 (3%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSE K +E V + GE+S AYF++KD + + ++W Sbjct: 39 PLTVSEAMNLAKGALEHI--TVTIVGEVSEVNVKRGYKAAYFTVKDASAALPCMMWFNRY 96 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +K + G++ + G+ T +P + + +L +G G L + +KL EGL Sbjct: 97 DKTD-GVTIGMKVEMTGRFTLYPKQGRMNFDVFTLKQAGEGDLRKKVADLARKLQNEGLM 155 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 K P+P P+ I V+TSP G + D+L+ + RFP+ V + V V+G+ + + Sbjct: 156 DPARKVPVPAFPERIGVVTSPRGDAVHDVLRTLRRRFPVATVQVAGVPVEGEHAAEYMIE 215 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + + D+I+L RGGGS E+L FNDE + RAI IPI++ IGHE D Sbjct: 216 GLRACYRA-------KVDVILLVRGGGSFENLMPFNDEALCRAIVACPIPIVTGIGHEPD 268 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD AD+R TPTGAA P ++ L+ + A L + + I + Sbjct: 269 TTIADMVADVRQSTPTGAALFVSPSQDMLEETFGTYAASLASGVQYAIDRAAMNVRRAED 328 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + LD LE L + R+ + L +R Sbjct: 329 RPLFKDPHTLFATDELTLDMTQDRLERLLAGATVPFATQVDTAAARL-ARSLEATTAPHR 387 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + A L I T + L R+ + Sbjct: 388 NQLDVAAGRLTRSLAGATTPFERDLEVTSARLA---RALPLGISRDKTAVDTLEARMRTV 444 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + ++++ + + L RGY D + + + RI + Sbjct: 445 AGGMLDPFNHELALSAGRMHDLSPLTVLSRGYAMATDGEGHVVKNVDQVKPGDRIEVRVS 504 Query: 491 DGQANAIVINKAPPK 505 DG + V P + Sbjct: 505 DGSLDCTVDALQPAE 519 >gi|150016577|ref|YP_001308831.1| exodeoxyribonuclease VII large subunit [Clostridium beijerinckii NCIMB 8052] gi|189037850|sp|A6LU45|EX7L_CLOB8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|149903042|gb|ABR33875.1| exodeoxyribonuclease VII, large subunit [Clostridium beijerinckii NCIMB 8052] Length = 399 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 217/376 (57%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +VSE++ ++K +++++ S++ V+GEIS + HSSGH YF+LKD+ RI+ + Sbjct: 1 MNIKTLTVSEVTNYIKRMLDNDFILSNLSVKGEISNLK-YHSSGHIYFTLKDSSGRINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG+E ++ G+ + +P + +Q+ + + G G L EK K+KL Sbjct: 60 MFKSNAVLLDFPLEEGMEVIIKGRASIYPATGSFQLYCDEIRKEGLGDLFIKFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EG F + +K +P P+ I ++TSPTGA IRDI+ + R + V+++P KVQG Sbjct: 120 SKEGYFDEAYKKELPKYPQRIGIVTSPTGAAIRDIINVSTRRSSLVDVVLYPAKVQGSGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 K+I + I N DIII+ RGGGSIE+LW+FN+E + +AI NS IPIISA Sbjct: 180 YKDIISGINYFNR------KKSVDIIIVGRGGGSIEELWNFNEEELAKAIFNSKIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T+ D+ AD+RA TP+ AE+AVP+ ++++ L+++ L+ I + N Sbjct: 234 VGHEIDFTICDFVADVRAATPSQGAEIAVPLSDNIKDRLLDISKNLDKYISDRLDTCRNN 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ + L + +S S +DRL L + I + ++ N + + I Sbjct: 294 LSGAQRILKVHSPMAKISNSYLEVDRLQDRLNFAMRTKIKGEKNKVENLNNLLFAHNPIK 353 Query: 365 NIQKNRQHILEKQQHI 380 I K I + + +I Sbjct: 354 VISKGYAIIKDNENNI 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 2/126 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + +L+ +++++ R A + +I + + +L R+ F Sbjct: 269 KDRLLDISKNLDK--YISDRLDTCRNNLSGAQRILKVHSPMAKISNSYLEVDRLQDRLNF 326 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + KIK V +L + + +GY I+D NN IT K L I + Sbjct: 327 AMRTKIKGEKNKVENLNNLLFAHNPIKVISKGYAIIKDNENNIITSKEQLNEDKNIEVIL 386 Query: 490 FDGQAN 495 DG Sbjct: 387 KDGNIE 392 >gi|256843406|ref|ZP_05548894.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus 125-2-CHN] gi|293380302|ref|ZP_06626376.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus 214-1] gi|256614826|gb|EEU20027.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus 125-2-CHN] gi|290923117|gb|EFE00046.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus 214-1] Length = 455 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 135/498 (27%), Positives = 241/498 (48%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V+G ++ + YQ E + P+G G L L++ + KL Sbjct: 61 MFRSFFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAEQMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF +HK +P P IAV+TS +GAVI DI+ + RFP + ++P +VQGD Sbjct: 121 AKEGLFDPEHKKKLPHFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS+ Sbjct: 181 ADSLVRAMRQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQVYAMQMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L ++L + +I+ K Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNTLDEIAHIKQLTSQLVASMQNIIRSKRER 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ + L + ++D+L + L+++++ + + + + R+ S Sbjct: 296 LSRVQNSVILREPTRLYDQQIQQVDQLKQRLQNSMQNRLTHSVQGYQLLKQRLFSVSPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + +Q QQ + ++ Sbjct: 356 RIGQMQQQEHFLQQRLIDNMQH-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K+ S + + L ++ TL+RG+ D I+ + + Sbjct: 378 ---------YLKNKRNSFTQVMQQLDDYSPLKTLERGFVYSTDEQGKTISSVKQVQKDDH 428 Query: 485 ILINFFDGQANAIVINKA 502 + ++F DGQ A+V Sbjct: 429 LRLHFKDGQVEAVVTKVK 446 >gi|295693202|ref|YP_003601812.1| exodeoxyribonuclease vii, large subunit [Lactobacillus crispatus ST1] gi|295031308|emb|CBL50787.1| Exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus ST1] Length = 455 Score = 311 bits (797), Expect = 2e-82, Method: Composition-based stats. Identities = 134/498 (26%), Positives = 241/498 (48%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V+G ++ + YQ E + P+G G L L++ + KL Sbjct: 61 MFRSFFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAEQMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF +HK + P IAV+TS +GAVI DI+ + RFP + ++P +VQGD Sbjct: 121 AKEGLFDPEHKKKLSHFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS+ Sbjct: 181 ADSLVRAMRQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEEVVRQVYAMQMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L ++L + +I+ K Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNTLDEIAHIKQLTSQLVASMQNIIRSKRER 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ + L + ++D+L + L+++++ + + + + R+ S Sbjct: 296 LSRVQNSVILREPTRLYDQQIQQVDQLKQRLQNSMQNRLTHSVQGYQLLKQRLFSVSPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + +Q QQ + ++ Sbjct: 356 RIGQMQQQEHFLQQRLIDNMQH-------------------------------------- 377 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K+ S + + L ++ TL+RG+ D I+ + + Sbjct: 378 ---------YLKNKRNSFTQVMQQLDDYSPLKTLERGFVYSTDEQGKTISSVKQVQKDDH 428 Query: 485 ILINFFDGQANAIVINKA 502 + ++F DGQ +A+V Sbjct: 429 LRLHFKDGQVDAVVTKVK 446 >gi|312862715|ref|ZP_07722955.1| exodeoxyribonuclease VII, large subunit [Streptococcus vestibularis F0396] gi|322516630|ref|ZP_08069544.1| exodeoxyribonuclease VII large subunit [Streptococcus vestibularis ATCC 49124] gi|311101575|gb|EFQ59778.1| exodeoxyribonuclease VII, large subunit [Streptococcus vestibularis F0396] gi|322124900|gb|EFX96324.1| exodeoxyribonuclease VII large subunit [Streptococcus vestibularis ATCC 49124] Length = 442 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 146/494 (29%), Positives = 232/494 (46%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ +LK + + L V + G++S +R S H YFSLKD + I A IW G Sbjct: 5 LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNFRRRPS--HQYFSLKDEGAVIQATIWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ +KKL EG Sbjct: 63 FKKLGFDLEEGMKINVVGRVQIYEPSGSYSIIIEKAEPDGVGALALQFEQLRKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P K I V+TSP+GAVIRDI+ ++ RFP + +++FP KVQG+ +EIA Sbjct: 123 FDERHKRGLPNFVKKIGVVTSPSGAVIRDIITTVNRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V++I S +P+IS++GHET Sbjct: 183 ENIQKANQR------DDLDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P K + + R +R I+Y L L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVSKSDTLVWIRERQNRAYQACLRRIQYNQERLAKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ ++D+L LE ++ RK + + +R++ L+ +++ Sbjct: 297 SQSVVFRQPERLYDGYLQKIDQLTARLEVFIKQDFERKQKEVALLSHRLQGLNLLTSVEN 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + Q+ + Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + + L S + RGY + + + +T +++ ++ I Sbjct: 370 TTTKNTLNGYRVRLEKAQDALLSLDTSRIVARGYAIV-NKGDKPLTTIKDITEGDQLTIQ 428 Query: 489 FFDGQANAIVINKA 502 DG+ V N Sbjct: 429 MRDGELEVEVKNVN 442 >gi|160934294|ref|ZP_02081681.1| hypothetical protein CLOLEP_03165 [Clostridium leptum DSM 753] gi|156866967|gb|EDO60339.1| hypothetical protein CLOLEP_03165 [Clostridium leptum DSM 753] Length = 406 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 209/362 (57%), Gaps = 11/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + +VS+L++++K +++ N L V + GEIS + + SGH YFSLKD S I +++ Sbjct: 2 NQVITVSQLNFYIKSLLDGNDALKQVFLTGEISNFTDHYRSGHFYFSLKDEKSVIKCVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +++ F PE+G++ LV G ++ + S +YQ+ +E + P G G L A E+ K+KL + Sbjct: 62 SRYSSRVRFHPEDGMKVLVRGGVSVYEASGQYQLYVEDMRPEGIGALNLAFEQLKQKLEK 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLFS Q K PIP P + VITSPTGA ++DI + R P +I PV VQG+E P Sbjct: 122 EGLFSPQRKRPIPPFPSRVGVITSPTGAAVQDIKSILGRRDPAAEIIFCPVLVQGEEAPG 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++ +A+ ++N + P D++I+ RGGGS+EDLW FNDE + R I+ S IP+ISA+G Sbjct: 182 QLIDAVKRMNRI------PDIDVLIIGRGGGSLEDLWAFNDESLARTISQSRIPVISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+ D+AADLRAPTP+ AAE+AVP Q+ + + +L + I + ++ Sbjct: 236 HETDFTICDFAADLRAPTPSAAAELAVPDMREYQAYFLQVCRKLKQAVSSRISAEKARVD 295 Query: 309 SLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + + + R LD + L + + + + I ++ + + Sbjct: 296 WSVNRPAMRSPLHFIEQKRILLDTVSNRLNQGFLLRVSKAENRLSVISGKLDALSPFRVL 355 Query: 367 QK 368 + Sbjct: 356 GR 357 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 6/159 (3%) Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR- 412 +++ + + E Q + Q+ ++ + + + A + + R Sbjct: 246 AADLRAPTPSAAAELAVPDMREYQAYFLQVCRKLKQAVSSRISAEKARVDWSVNRPAMRS 305 Query: 413 ----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 I + + R+ ++ +S+ + L + + L RGY+ + Sbjct: 306 PLHFIEQKRILLDTVSNRLNQGFLLRVSKAENRLSVISGKLDALSPFRVLGRGYSLVL-K 364 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 + I +L I + DG+A VI P ++ Sbjct: 365 QGSLIKTVNDLKKDDGITVKLSDGEAKCQVIGVLPESKE 403 >gi|300361961|ref|ZP_07058138.1| exodeoxyribonuclease VII large subunit [Lactobacillus gasseri JV-V03] gi|300354580|gb|EFJ70451.1| exodeoxyribonuclease VII large subunit [Lactobacillus gasseri JV-V03] Length = 456 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 148/508 (29%), Positives = 238/508 (46%), Gaps = 59/508 (11%) Query: 10 LDHPEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 D+P Y SVS+L++++ +++ L V ++GE+S +R S H YFSLKD+ S+I+ Sbjct: 2 ADNPVYLSVSDLNFYISQKFKNDPYLHKVFLQGELSNFRFRMHS-HQYFSLKDDKSKINV 60 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++++ K++F PEEG++ V G + + YQ +++ P+G G L L + ++K Sbjct: 61 VMFRSFFEKLKFKPEEGMKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L +EGLF++ HK +P P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE Sbjct: 121 LAKEGLFNEDHKKRLPLFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I ++ Q+ + D++I+ RGGGS+EDLW FN+E +VR I +P+IS Sbjct: 181 AADTIVASLKQI-----QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVIS 235 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 ++GHETD TLAD AD RA TPT AAE A P + + ++ L ARL + I+ K Sbjct: 236 SVGHETDTTLADLVADARAATPTAAAEYATPNLADVLTKIVQLRARLYAAMQANIRAKRQ 295 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L L + ++D L L + + + R+K+ Sbjct: 296 ILDRLRNAPVLQEPTRIYDQQIQQVDMLTHRLNQAMSNQLQHDRSGVRLLQERLKALNPG 355 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +EQ+ ++ + L R Sbjct: 356 R--------------RLEQLERERTFIVANLFSTMTTYLKDQR----------------- 384 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ T + L + T+ RGY D N +T L Sbjct: 385 ----------------NKLNRTMQQLDDISPLKTISRGYVYTTDQEGNTVTSVDKLEIDE 428 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKK 511 ++ ++F DGQ V N K+ +K Sbjct: 429 KLKLHFKDGQVQVNVENIRREKDGNQEK 456 >gi|323466276|gb|ADX69963.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus helveticus H10] Length = 447 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 134/498 (26%), Positives = 240/498 (48%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 D+ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 TDNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V+G ++ + YQ E++ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ +HK +P P IAV+TS +GAVI DI+ + RFP + +FP +VQGD Sbjct: 121 AKEGLFNPEHKRKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS+ Sbjct: 181 ADSLVKAMRQIAAQGDE-----YDVMIIGRGGGSLEDLWSFNEEEVVRQVYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L++RL + I K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLADELAGIHQLQSRLIAGMQNNINQKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + ++D L + L+++++ + +++ + R+ S Sbjct: 296 LNRIKNSVIMREPTRLYDQQIQQVDLLKQRLQNSIQNKVNNSLQNYRLLKQRLLSVSPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I +Q + + +K + Sbjct: 356 QIAGMKQQEKFLAKQLNDNMKHY------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K+ + S + L ++ TL+RG+ + ++ + Sbjct: 379 ----------LKNKRSDFSKIVQQLDDYSPLKTLERGFVYTTNEEGETVSSVDQIKKDDH 428 Query: 485 ILINFFDGQANAIVINKA 502 + ++F DG+ A V Sbjct: 429 LNLHFKDGEVTATVTEVK 446 >gi|153208843|ref|ZP_01947067.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154707196|ref|YP_001424680.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii Dugway 5J108-111] gi|165921446|ref|ZP_02219634.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 334] gi|212212372|ref|YP_002303308.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii CbuG_Q212] gi|212218658|ref|YP_002305445.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii CbuK_Q154] gi|120575694|gb|EAX32318.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii 'MSU Goat Q177'] gi|154356482|gb|ABS77944.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii Dugway 5J108-111] gi|165916761|gb|EDR35365.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 334] gi|212010782|gb|ACJ18163.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii CbuG_Q212] gi|212012920|gb|ACJ20300.1| exodeoxyribonuclease VII large subunit [Coxiella burnetii CbuK_Q154] Length = 414 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 125/381 (32%), Positives = 217/381 (56%), Gaps = 10/381 (2%) Query: 1 MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ ++ SL+ Y+VS+L+ + ++E + + GEIS +SGH YFSLK Sbjct: 1 MSLLKEEISLNAETTIYTVSQLNTEARLLLEERFQKIWITGEISNL-SRPASGHLYFSLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D +++ ++ ++ F PE G LV +I+ + +Q+I+ + +GSG L Sbjct: 60 DERAQVRCAFFRNYHRQLNFNPENGHHVLVQAEISLYEARGDFQLIVTQMQAAGSGALQI 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 A EK K++L +EGLF+ ++K PIP P I VITS +GA IRD+L+ ++ RFP + VI++ Sbjct: 120 AFEKLKQRLEKEGLFAPENKKPIPLFPTTIGVITSSSGAAIRDVLKVLNRRFPTISVIVY 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P VQGD+ ++IA+AI + ++ KE D++++ RGGGS+EDLW FN+E + RAI Sbjct: 180 PSLVQGDKAAEQIAHAIKKADSRKE------CDVLLVVRGGGSLEDLWPFNEERVARAIF 233 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + IP+++ +GHE D+T+AD+ AD RA TP+ AAEM P ++ + + + RL + I Sbjct: 234 SCEIPVVTGVGHEIDFTIADFVADHRAATPSAAAEMVSPNRKEWLQHVHSFQRRLQHFIN 293 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 +++ L L+ L DQ L R +++ L L ++ R+ ++ + Sbjct: 294 THLRHYQLQLRHLITRLQRPDQRLESQRRQIEALQHRLMMAMDYDFNRRQQNLAAKAQAL 353 Query: 358 KSDFLIHNIQKNRQHILEKQQ 378 ++ + +++ + + Q Sbjct: 354 QTMSPLTTLKRGYAIVTHQNQ 374 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 1/143 (0%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + NR+ L+ ++ ++ + + ++ L ++ R+ Sbjct: 263 PSAAAEMVSPNRKEWLQHVHSFQRRLQHFINTHLRHYQLQLRHLITRLQRPDQRLESQRR 322 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 I+ L R+ + + +++ + LQ+ + TLKRGY + N + + + Sbjct: 323 QIEALQHRLMMAMDYDFNRRQQNLAAKAQALQTMSPLTTLKRGYAIVTHQN-QIVRKAQA 381 Query: 479 LATKTRILINFFDGQANAIVINK 501 L +I +GQ + V Sbjct: 382 LKVGDKITARVAEGQLDCRVEKI 404 >gi|298675638|ref|YP_003727388.1| exodeoxyribonuclease VII large subunit [Methanohalobium evestigatum Z-7303] gi|298288626|gb|ADI74592.1| exodeoxyribonuclease VII, large subunit [Methanohalobium evestigatum Z-7303] Length = 406 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 130/360 (36%), Positives = 213/360 (59%), Gaps = 14/360 (3%) Query: 14 EYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+VSEL+ H+K ++++ LS + VRGEIS ++ H+SGH YF+LKD +++I + ++ Sbjct: 2 IYTVSELNTHIKQLLKNELSINQIWVRGEISNFK-KHTSGHYYFTLKDRNNQISCVSFRS 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 T I+F PE+ ++ L+ G I + +YQ+ + + P G G L A E+ K +L EG Sbjct: 61 TNRNIKFEPEDSMQVLIFGSIDVYKVRGQYQLNVFDIRPDGIGELYKAYEQLKNQLDSEG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 F D +K IP P I V TS GA I DI+ + RFP+ ++I P VQG++ I Sbjct: 121 FFKDTNKKSIPEFPHRIGVATSTKGAAIHDIMNVVKRRFPVDILISPTIVQGEQSASSIV 180 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 ++I +LN D+IIL RGGGS+EDLW FN+E++ RAI +S P+ISA+GHET Sbjct: 181 DSIEKLNQ-------CSVDVIILGRGGGSLEDLWSFNEEIVARAIYSSQKPVISAVGHET 233 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+ AD+RAPTP+ AAE+ VP + + NL +R+ N I I K L + Sbjct: 234 DYTIADFTADMRAPTPSAAAELVVPDYMDIIRRINNLSSRMENAITNKITEKSTQLYYVQ 293 Query: 312 KALPNSDQT---LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 K + + ++ + ++ ++D L +E++++ ++ K N +++ + +++ Sbjct: 294 KRM-HPERLYDNIRQNQQQVDELLSRMEYSIKNVLKSKKSSLQIHANHLQAVSPLKTLER 352 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 3/136 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I +E + + + +H E+ + I + +L++R+E+ Sbjct: 265 RRINNLSSRMENAITNKITEKSTQLYYVQKRMHP--ERLYDNIRQNQQQVDELLSRMEYS 322 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINF 489 + + +KS +S+ I LQ+ + TL+RGY+ D N + I N++ + I Sbjct: 323 IKNVLKSKKSSLQIHANHLQAVSPLKTLERGYSITTDSKNGSVIKSIDNVSNGDSLDIIV 382 Query: 490 FDGQANAIVINKAPPK 505 DG V N + Sbjct: 383 KDGIIKCSVKNTSKKS 398 >gi|95928785|ref|ZP_01311531.1| exodeoxyribonuclease VII, large subunit [Desulfuromonas acetoxidans DSM 684] gi|95135130|gb|EAT16783.1| exodeoxyribonuclease VII, large subunit [Desulfuromonas acetoxidans DSM 684] Length = 405 Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats. Identities = 134/357 (37%), Positives = 202/357 (56%), Gaps = 8/357 (2%) Query: 13 PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 P ++ +L+ ++ +E N V VRGEIS SGH YF+LKD +I +++++ Sbjct: 7 PILTIGQLNELIRETLEDNFVQVRVRGEISNL-SRPGSGHWYFTLKDEKGQIRSVMFRSA 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ F PE G + + G+I+ + Q+I +++ G G L A E+ KKKL EGL Sbjct: 66 NRQVPFQPEHGQQVICNGRISLYEARGDIQLICDTMEAEGYGGLQLAFEQLKKKLDAEGL 125 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+ +HK +P P+ I VITS TGA I DIL + R LRV++ PV VQGD P++I Sbjct: 126 FALEHKRTLPPHPQCIGVITSATGAAIHDILNILQRRAHGLRVVLRPVLVQGDLAPQQIV 185 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ +LN + + II+ RGGGS+EDL FN E + +AI S+ PIISA+GHET Sbjct: 186 MALKELN------EYGQCEAIIVGRGGGSLEDLQAFNSEEVAQAIFASACPIISAVGHET 239 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+ ADLRAPTP+ AAE+ V ++ L+ L L RLN + R + K L +L Sbjct: 240 DFTIADFVADLRAPTPSAAAELVVKNRQELEQHLDQLSIRLNTAMNRQLTLKQQHLEALS 299 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 K L + L + R D L R L+ + + R + R+ + ++ +Q+ Sbjct: 300 KRLRSPQARLQQQQQRCDDLARRLQQAIAHDLERCQHQLQQLAGRLHALSPLNTMQR 356 Score = 114 bits (284), Expect = 5e-23, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 53/142 (37%), Gaps = 2/142 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 KNRQ + + + + + K++ + L + R+ L R+ Sbjct: 264 KNRQELEQHLDQLSIRLNTAMNRQLTLKQQHLEALSKRLRSPQARLQQQQQRCDDLARRL 323 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN--NFITQKRNLATKTRI 485 + ++H ++ C + L + + NT++RG++ + + + L R+ Sbjct: 324 QQAIAHDLERCQHQLQQLAGRLHALSPLNTMQRGFSVVATEDTPPALVRHADQLHVGQRV 383 Query: 486 LINFFDGQANAIVINKAPPKEQ 507 + F G A A + +P Sbjct: 384 SLQFHQGSAKATIDAVSPVDPS 405 >gi|306830870|ref|ZP_07464032.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426893|gb|EFM30003.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 442 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 147/492 (29%), Positives = 227/492 (46%), Gaps = 62/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD ++ I A +W GT Sbjct: 5 LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ KKKL E G Sbjct: 63 FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLADY AD RA TPT AAE+A PV + S I + + L Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERQNRAYQASLRVIKQKQERLDKL 296 Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LDRL +L + ++ + + + R+ + L +I++ Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLTNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + Q+ + + Sbjct: 357 YQERLEAFQRLLISNMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY +Q N I+ ++ ++ + Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVTVGDQLTVR 428 Query: 489 FFDGQANAIVIN 500 DGQ V + Sbjct: 429 LKDGQLEVEVKD 440 >gi|260101431|ref|ZP_05751668.1| exodeoxyribonuclease VII [Lactobacillus helveticus DSM 20075] gi|260084771|gb|EEW68891.1| exodeoxyribonuclease VII [Lactobacillus helveticus DSM 20075] gi|328465629|gb|EGF36852.1| exodeoxyribonuclease VII large subunit [Lactobacillus helveticus MTCC 5463] Length = 447 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 134/497 (26%), Positives = 240/497 (48%), Gaps = 58/497 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 D+ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 TDNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V+G ++ + YQ E++ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ +HK +P P IAV+TS +GAVI DI+ + RFP + +FP +VQGD Sbjct: 121 AKEGLFNPEHKRKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS+ Sbjct: 181 ADSLVKAMRQIAAQGDE-----YDVMIIGRGGGSLEDLWSFNEEEVVRQVYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L++RL + I K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLADELAGIHQLQSRLIAGMQNNINQKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + ++D L + L+++++ + +++ + R+ S Sbjct: 296 LNRIKNSVIMREPTRLYDQQIQQVDLLKQRLQNSIQNKVNNSLQNYRLLKQRLLSVSPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I +Q + + +K + Sbjct: 356 QIAGMKQQEKFLAKQLNDNMKHY------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K+ + S + L ++ TL+RG+ + ++ + Sbjct: 379 ----------LKNKRSDFSKIVQQLDDYSPLKTLERGFVYTTNEEGETVSSVDQIKKDDH 428 Query: 485 ILINFFDGQANAIVINK 501 + ++F DG+ A V Sbjct: 429 LNLHFKDGEVTATVTEV 445 >gi|117924359|ref|YP_864976.1| exodeoxyribonuclease VII large subunit [Magnetococcus sp. MC-1] gi|117608115|gb|ABK43570.1| Exodeoxyribonuclease VII large subunit [Magnetococcus sp. MC-1] Length = 448 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 141/501 (28%), Positives = 239/501 (47%), Gaps = 55/501 (10%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 +S SV EL+ ++ ++E + V V+GE+S +SGH YF+L D ++ Sbjct: 2 YSNDTPSWKKVLSVFELNSAIRDLLEEGFAFVRVQGEVSRISA-PASGHLYFNLVDEQAQ 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I A++W+ + ++ P EG E L+ G+I+ F +YQII+++L P G+G+ L + Sbjct: 61 IRAVVWRASKARLSHHPREGEEVLITGRISVFAPRGEYQIIVDALTPKGAGSEREKLLQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 ++L +EGLF Q K P+P++P +I V TS +GA ++DI++ + R P +++ P +VQ Sbjct: 121 HRQLEQEGLFDPQRKRPLPYLPHVIGVATSESGAALQDIIRVLESRNPDFHLLLAPCQVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E P+ I A+ LN R +II RGGGS EDL FN E +VRAIA S+IP Sbjct: 181 GSEAPQAIVQALRALNA------DGRAQVIICGRGGGSAEDLACFNSEQVVRAIAASAIP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SA+GHE D TLAD AADLRA TP+ AAE+ +P + L L RL + + + Sbjct: 235 VVSAVGHEVDTTLADLAADLRAATPSQAAELIMPERLALAQETTALALRLQRAMHQQLHN 294 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + + + L + + L +R R D L L+ LE ++ ++ + N + Sbjct: 295 QQRRVQQASQRLLHPSRRLDQARLRCDELQMRLQGVLERLLPQQQQRLRRATNTLHHWAT 354 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 ++ + RQ + ++Q + +++ Sbjct: 355 GPSLPRQRQQLKQQQHRAHTAMLY--------------------------------QLRQ 382 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 +R+ I + + L+RGY ++D + + + + Sbjct: 383 WQSRLHSAQLQLI---------------ALSPLQVLERGYAIVRDNQGSVLRDAQAAPLE 427 Query: 483 TRILINFFDGQANAIVINKAP 503 + + I G A V + P Sbjct: 428 STLTITLAKGTLAARVTQRKP 448 >gi|161830515|ref|YP_001597093.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 331] gi|161762382|gb|ABX78024.1| exodeoxyribonuclease VII, large subunit [Coxiella burnetii RSA 331] Length = 414 Score = 310 bits (794), Expect = 4e-82, Method: Composition-based stats. Identities = 124/381 (32%), Positives = 217/381 (56%), Gaps = 10/381 (2%) Query: 1 MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M+ ++ SL+ Y+VS+L+ + ++E + + GEIS +SGH YFSLK Sbjct: 1 MSLLKEEISLNAETTIYTVSQLNTEARLLLEERFQKIWITGEISNL-SRPASGHLYFSLK 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D +++ ++ ++ F PE G LV +I+ + +Q+I+ + +GSG L Sbjct: 60 DERAQVRCAFFRNYHRQLNFNPENGHHVLVQAEISLYEARGDFQLIVTQMQAAGSGALQI 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 A EK K++L +EGLF ++K PIP P I VITS +GA IRD+L+ ++ RFP + +I++ Sbjct: 120 AFEKLKQRLEKEGLFVPENKKPIPLFPTTIGVITSSSGAAIRDVLKVLNRRFPTISIIVY 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P VQGD+ ++IA+AI + ++ KE D++++ RGGGS+EDLW FN+E + RAI Sbjct: 180 PSLVQGDKAAEQIAHAIKKADSRKE------CDVLLVVRGGGSLEDLWPFNEERVARAIF 233 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + IP+++ +GHE D+T+AD+ AD RA TP+ AAEM P ++ + + + RL + I Sbjct: 234 SCEIPVVTGVGHEIDFTIADFVADHRAATPSAAAEMVSPNRKEWLQHVHSFQRRLQHFIN 293 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 +++ L L+ L DQ L R +++ L L ++ R++++ + Sbjct: 294 THLRHYQLQLRHLITRLQRPDQRLESQRRQIEALQHRLMMAMDYDFNRRHQNLAAKAQAL 353 Query: 358 KSDFLIHNIQKNRQHILEKQQ 378 ++ + +++ + + Q Sbjct: 354 QTMSPLTTLKRGYAIVTHQNQ 374 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 1/143 (0%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + NR+ L+ ++ ++ + + ++ L ++ R+ Sbjct: 263 PSAAAEMVSPNRKEWLQHVHSFQRRLQHFINTHLRHYQLQLRHLITRLQRPDQRLESQRR 322 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 I+ L R+ + + H +++ + LQ+ + TLKRGY + N + + + Sbjct: 323 QIEALQHRLMMAMDYDFNRRHQNLAAKAQALQTMSPLTTLKRGYAIVTHQN-QIVRKAQA 381 Query: 479 LATKTRILINFFDGQANAIVINK 501 L +I +GQ + V Sbjct: 382 LKVGDKITARVAEGQLDCRVEKI 404 >gi|184155738|ref|YP_001844078.1| exodeoxyribonuclease VII large subunit [Lactobacillus fermentum IFO 3956] gi|183227082|dbj|BAG27598.1| exodeoxyribonuclease VII large subunit [Lactobacillus fermentum IFO 3956] Length = 482 Score = 310 bits (794), Expect = 4e-82, Method: Composition-based stats. Identities = 119/499 (23%), Positives = 224/499 (44%), Gaps = 39/499 (7%) Query: 15 YSVSELSYHLKHIVESN---LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS----RIDAI 67 +V++L+ ++K +++ +V V G+++ +R + H YFSLKD+ + ++ + Sbjct: 8 LTVAQLTKYVKRKFDADPYLNRNVYVVGQLTDFRLRKT--HQYFSLKDDQADGKFQLSVV 65 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ K++F PE G+ ++ G+++ + YQ+ E++ +G GTL E+ KKL Sbjct: 66 MFQSAFAKVKFTPENGMRVIIRGRLSVYEARGNYQLYAEAMEVTGVGTLQVQFEQLYKKL 125 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K + PK IAV+TS AV DI+ + R ++++ +P +VQG++ Sbjct: 126 RQEGLFDRPKKT-VRPFPKRIAVVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQA 184 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EIA I +++ D +I+ARGGGS+EDLW FN+E++ RAI +++P+IS+ Sbjct: 185 AGEIAAQIKRVSDA------NDYDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISS 238 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYK 303 IGHETD T+ D AD+R TPT AAE + + E L + + Sbjct: 239 IGHETDTTITDLVADVRTATPTAAAEAVTKWPLADVIAEVEREQTLLYTAEKRQLANLKQ 298 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L ++ ++D L L+ +++ + R + ++ Sbjct: 299 RLLALTESYFLKQPERLYERQVQQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPR 358 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + K + + QQ + ++ H E+ + R+ L + Sbjct: 359 AQLAKQQMQLARLQQGLRAGMRGH------------------LEEERGRLIRLEEGRRAS 400 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + + + + L + + L RG+ + + + LA Sbjct: 401 TNLLLQATQNYQRGQAQRLDTLIKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGD 459 Query: 484 RILINFFDGQANAIVINKA 502 + F GQA V Sbjct: 460 EATVKFEQGQAQVTVTKIE 478 >gi|161507736|ref|YP_001577697.1| exodeoxyribonuclease VII large subunit [Lactobacillus helveticus DPC 4571] gi|172048324|sp|A8YVW9|EX7L_LACH4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|160348725|gb|ABX27399.1| Exodeoxyribonuclease [Lactobacillus helveticus DPC 4571] Length = 447 Score = 310 bits (794), Expect = 4e-82, Method: Composition-based stats. Identities = 134/498 (26%), Positives = 239/498 (47%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 D+ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 TDNKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V+G ++ + YQ E++ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAENMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ +HK +P P IAV+TS +GAVI DI+ + RFP + +FP +VQGD Sbjct: 121 AKEGLFNPEHKRKLPRFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS+ Sbjct: 181 ADSLVKAMRQIAAQGDE-----YDVMIIGRGGGSLEDLWSFNEEEVVRQVYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L++RL + I K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNLADELAGIHQLQSRLIAGMQNNINQKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + ++D L + L+++++ + +++ + R+ S Sbjct: 296 LNRIKNSVIMREPTRLYDQQIQQVDLLKQRLQNSIQNKVNNSLQNYRLLKQRLLSVSPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I Q + + +K + Sbjct: 356 QIAGMEQQEKFLAKQLNDNMKHY------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K+ + S + L ++ TL+RG+ + ++ + Sbjct: 379 ----------LKNKRSDFSKIVQQLDDYSPLKTLERGFVYTTNEEGETVSSVDQIKKDDH 428 Query: 485 ILINFFDGQANAIVINKA 502 + ++F DG+ A V Sbjct: 429 LNLHFKDGEVTATVTEVK 446 >gi|73662540|ref|YP_301321.1| exodeoxyribonuclease VII large subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82592841|sp|Q49XW8|EX7L_STAS1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|72495055|dbj|BAE18376.1| exodeoxyribonuclease large subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 445 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 152/495 (30%), Positives = 239/495 (48%), Gaps = 61/495 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ ++K+ + + L V ++GE+S ++ HSSGH YF++KD +S I A+++ Sbjct: 2 SEYLSVTSLTKYIKYKFDQDPHLQSVLIKGELSNFK-KHSSGHLYFNVKDKNSVISAMMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG +KI+F P+EG E L+ +++ + YQI + + G G L LE+ KKKL + Sbjct: 61 KGNASKIDFEPKEGDEVLLEARVSVYERRGNYQIYVNKMHMDGIGNLYQKLEQLKKKLTK 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 EG F HK IP P+ IAV+T+ TGA IRDI I+ R+PL + VQG++ Sbjct: 121 EGFFDQNHKKVIPKFPQKIAVLTAGTGAAIRDIHTTINSRYPLAEQVQINTLVQGEQAKS 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I I Q + L D II+ RGGGSIEDLW+FN+E +V+AI N PIISA+G Sbjct: 181 DIIEKINQADAL-------NVDTIIIGRGGGSIEDLWNFNEEDVVKAIYNCQTPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL+D+ AD+RA TPT AA MA P + L+ L L I + ++ K L Sbjct: 234 HETDFTLSDFVADVRAATPTQAAVMATPDQYELRQYLQQANLSLTRFIKQYMQQKRKHLE 293 Query: 309 SLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + D L ++L+ +L + I + + + N I Sbjct: 294 HVASYYKFQTPSLLYDQQIQKRDDLEKQLKLSLNLKIKNQQQQLQLLFNNFNLKTFKQRI 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 R + Q+ +E L Sbjct: 354 --KRDQLTNNQKRVE-----------------------------------------LSKV 370 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + +L ++ +++ L + + NT+ RGYT + + ++ IT ++LA I+ Sbjct: 371 MHNLLDNQ----KNNLARKLENLNNLSPTNTMLRGYTIV-NKDDKVITSTKDLAENDNIV 425 Query: 487 INFFDGQANAIVINK 501 + DG +A V Sbjct: 426 LTMKDGVVDAQVKKV 440 >gi|227515670|ref|ZP_03945719.1| exodeoxyribonuclease VII [Lactobacillus fermentum ATCC 14931] gi|227085973|gb|EEI21285.1| exodeoxyribonuclease VII [Lactobacillus fermentum ATCC 14931] Length = 482 Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 119/499 (23%), Positives = 224/499 (44%), Gaps = 39/499 (7%) Query: 15 YSVSELSYHLKHIVESN---LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS----RIDAI 67 +V++L+ ++K +++ +V V G+++ +R + H YFSLKD+ + ++ + Sbjct: 8 LTVAQLTKYVKRKFDADPYLNRNVYVVGQLTDFRLRKT--HQYFSLKDDQADGKFQLSVV 65 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ K++F PE G+ ++ G+++ + YQ+ E++ +G GTL E+ KKL Sbjct: 66 MFQSAFAKVKFTPENGMRVIIRGRLSVYEARGNYQLYAEAMEVTGVGTLQVQFEQLYKKL 125 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K + PK IAV+TS AV DI+ + R ++++ +P +VQG++ Sbjct: 126 RQEGLFDRPKKT-VRPFPKRIAVVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQA 184 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EIA I +++ D +I+ARGGGS+EDLW FN+E++ RAI +++P+IS+ Sbjct: 185 AGEIAAQIKRVSDA------NDYDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISS 238 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYK 303 IGHETD T+ D AD+R TPT AAE + + E L + + Sbjct: 239 IGHETDTTITDLVADVRTATPTAAAEAVTKWPLADVIAEVEREQTLLYTAEKSQLANLKQ 298 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L ++ ++D L L+ +++ + R + ++ Sbjct: 299 RLLALTESYFLKQPERLYERQVQQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPR 358 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + K + + QQ + ++ H E+ + R+ L + Sbjct: 359 AQLAKQQMQLARLQQGLRAGMRGH------------------LEEERGRLIRLEEGRRAS 400 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + + + + L + + L RG+ + + + LA Sbjct: 401 TNLLLQATQNYQRGQAQRLDTLIKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGD 459 Query: 484 RILINFFDGQANAIVINKA 502 + F GQA V Sbjct: 460 EATVKFEQGQAQVTVTKIE 478 >gi|260663545|ref|ZP_05864435.1| exodeoxyribonuclease VII, large subunit [Lactobacillus fermentum 28-3-CHN] gi|260552086|gb|EEX25139.1| exodeoxyribonuclease VII, large subunit [Lactobacillus fermentum 28-3-CHN] Length = 482 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 119/499 (23%), Positives = 224/499 (44%), Gaps = 39/499 (7%) Query: 15 YSVSELSYHLKHIVESN---LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS----RIDAI 67 +V++L+ ++K +++ +V V G+++ +R + H YFSLKD+ + ++ + Sbjct: 8 LTVAQLTKYVKRKFDADPYLNRNVYVVGQLTDFRLRKT--HQYFSLKDDQADGKFQLSVV 65 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ K++F PE G+ ++ G+++ + YQ+ E++ +G GTL E+ KKL Sbjct: 66 MFQSAFAKVKFTPENGMRVIIRGRLSVYEARGNYQLYAEAMEVTGVGTLQVQFEQLYKKL 125 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K + PK IAV+TS AV DI+ + R ++++ +P +VQG++ Sbjct: 126 RQEGLFDRPKKT-VRPFPKRIAVVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQA 184 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EIA I +++ D +I+ARGGGS+EDLW FN+E++ RAI +++P+IS+ Sbjct: 185 AGEIAAQIKRISDA------NDYDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISS 238 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYK 303 IGHETD T+ D AD+R TPT AAE + + E L + + Sbjct: 239 IGHETDTTITDLVADVRTATPTAAAEAVTKWPLADVIAEVEREQTLLYTAEKSQLANLKQ 298 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L ++ ++D L L+ +++ + R + ++ Sbjct: 299 RLLALTESYFLKQPERLYERQVQQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPR 358 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + K + + QQ + ++ H E+ + R+ L + Sbjct: 359 AQLAKQQMQLARLQQGLRAGMRGH------------------LEEERGRLIRLEEGRRAS 400 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + + + + L + + L RG+ + + + LA Sbjct: 401 TNLLLQATQNYQRGQAQRLDTLIKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGD 459 Query: 484 RILINFFDGQANAIVINKA 502 + F GQA V Sbjct: 460 EATVKFEQGQAQVTVTKIE 478 >gi|323702774|ref|ZP_08114434.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum nigrificans DSM 574] gi|323532291|gb|EGB22170.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum nigrificans DSM 574] Length = 401 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 134/360 (37%), Positives = 213/360 (59%), Gaps = 12/360 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SVSEL+ ++K +ES+ L+++ V+GEIS + IHSSGH YF+LKD S + A++++ Sbjct: 3 ILSVSELTKYIKDKIESDYILANIWVKGEISNLK-IHSSGHIYFTLKDQESCLKAVMFRS 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F PE G+ +V G ++ + YQ+ E + P G G L A E+ K+KL G Sbjct: 62 RGRRLLFRPEYGMHVIVRGYVSVYERDGTYQLYAEEMEPDGIGALYIAFEQMKQKLAARG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190 LF + K PIP IP+++ +ITSPTGA ++D+L + R+ +++I+ PV VQG+ P EI Sbjct: 122 LFDEGRKRPIPRIPRVVGIITSPTGAAVQDMLNIMRRRWSGVQIILAPVLVQGESAPGEI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI ++N D++I+ RGGGS+E+LW FN E + AIANS+IP+ISA+GHE Sbjct: 182 ARAIGRMNQ------VGGIDVLIVGRGGGSLEELWAFNTEEVAMAIANSAIPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD ADLRAPTP+ AAE+ VP + +Q L +L+ RL + ++ L + Sbjct: 236 TDYTIADMVADLRAPTPSAAAELVVPDQREMQRYLRSLQQRLVKAVHNNLERNRQRLKAC 295 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 +L + LDRL L+ +++ K ++ +++ + + + Sbjct: 296 TNSPSLQRPFLITGNRQQTLDRLTTALQRAGRLMLADKSAALANLAGKLQVLSPLATLAR 355 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 2/140 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ ++++ QQ + + V H ++ K ++ + +L T Sbjct: 264 REMQRYLRSLQQRLVKAV--HNNLERNRQRLKACTNSPSLQRPFLITGNRQQTLDRLTTA 321 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ + +++ LQ + TL RGY+ + +T + + Sbjct: 322 LQRAGRLMLADKSAALANLAGKLQVLSPLATLARGYSICTAADGKVLTDSGIINIGDHVH 381 Query: 487 INFFDGQANAIVINKAPPKE 506 + G N V++K+ E Sbjct: 382 VILDKGSINCTVVSKSNAAE 401 >gi|172056942|ref|YP_001813402.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sibiricum 255-15] gi|259646290|sp|B1YLQ2|EX7L_EXIS2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|171989463|gb|ACB60385.1| exodeoxyribonuclease VII, large subunit [Exiguobacterium sibiricum 255-15] Length = 447 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 133/491 (27%), Positives = 221/491 (45%), Gaps = 62/491 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 VSEL ++K +E++ L V V GE+S ++ HSSGH YF+LKD SR+ A+++ Sbjct: 2 TNPLQVSELVQYVKRELENDSLLQQVQVVGEVSNFK-RHSSGHLYFTLKDEQSRMKAVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 ++++ +G ++ +I+ + S + Q+ +E ++ G G L A + K+ + Sbjct: 61 ARDASRVKTDIRDGARVIITARISVYVASGEMQLYVERMMEDGVGALYEAYVQLKEDVEA 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF-PVKVQGDECPK 188 G F + K P+P P+ I ++TSP GA + DI + R+P I+F PV VQG E Sbjct: 121 RGWFEAEQKLPLPAFPQKIGIVTSPKGAALHDIATTLRRRYPQAAIVFAPVLVQGKEAAP 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I AI +N D++I+ RGGGSIE+LW FN+ +V AI S IPI+SA+G Sbjct: 181 QIVRAIEWMN------EHQACDVMIIGRGGGSIEELWAFNEMPVVTAIHQSRIPIVSAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD+ AD+RA TPT AAE+ P L L L RL + I + + + Sbjct: 235 HETDFTIADFVADVRAATPTAAAELVTPEAAELAKRLNELNRRLTRHYAQYITERKDQVQ 294 Query: 309 S--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + L + RLDR L + ++ K + +NR + + Sbjct: 295 RLATSYGLKSPRVLLGLKQERLDRAEMGLNRIGKQVLQSKQQALTDQVNRFARIAMQERL 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + ++ ++ +E+I Sbjct: 355 AEQGRQLVRTRKQLERIHTV---------------------------------------- 374 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 +++ + L S + + RGYT ++ + + L+ Sbjct: 375 --------LRTKQDRLHQMIARLDSVSPTQVMLRGYTYVE-QDGRLVRSVTELS-DQTFR 424 Query: 487 INFFDGQANAI 497 + F DG A Sbjct: 425 VQFHDGSILAK 435 >gi|224373381|ref|YP_002607753.1| exodeoxyribonuclease VII large subunit [Nautilia profundicola AmH] gi|254783704|sp|B9L5W5|EX7L_NAUPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|223589526|gb|ACM93262.1| exodeoxyribonuclease VII, large subunit [Nautilia profundicola AmH] Length = 445 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 139/491 (28%), Positives = 225/491 (45%), Gaps = 54/491 (10%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV++L+ +K IVES+ V V GEIS HSSGH YF+LKD +S I+ +WK L Sbjct: 3 PISVTQLNNQIKSIVESHFEIVLVEGEISKVV-YHSSGHLYFTLKDENSSINCAMWKSNL 61 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++F +EG + V G ++ + +Y+II +S+ PSG G L A E+ K++L + G F Sbjct: 62 TRMKFRLKEGEKVYVYGALSVYVPRGEYKIIAQSIEPSGVGALQKAFEQLKEELSKLGYF 121 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + K IP P+ IA++TS TGA ++D+L+ R+ L + +F VQGD ++IA Sbjct: 122 DEARKKSIPRFPRRIAIVTSATGAALQDMLRVAGKRWQLTEIYLFNALVQGDGAAEDIAM 181 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + D+II+ RGGGS EDLW FN+ ++ A+ N+S PIISA+GHE D Sbjct: 182 KIKLADEFVFEDGS-GFDLIIIGRGGGSKEDLWPFNERVVADAVYNASTPIISAVGHEID 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + ++D+ AD+RA TP+ A E+A+P K + L ++ I LI+ K L + + Sbjct: 241 YLISDFVADVRAATPSNAMEIALPDKNEILLMLDEMKNAFVYKISHLIQKKERELIHIRE 300 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + + L + L + H+ I +K + N + N + S + Sbjct: 301 LLNASSPVKKLDMKLQECELLLKRFNHSYINQIQKKEKELNELKNILFSLSPVI------ 354 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +I I+ L + + Sbjct: 355 -----------------------------------------KINSFEKEIELLKSTFKNK 373 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + I S + ++ K K+G+ I N I + L ++ Sbjct: 374 TAQIISSKEKELINLKSAYETLNPKKREKKGFAEIT-KNGKRI-DLKELKIGDIFDVSNA 431 Query: 491 DGQANAIVINK 501 D + + K Sbjct: 432 DVLIKSKALEK 442 >gi|110005166|emb|CAK99493.1| putative exodeoxyribonuclease vII large subunit protein [Spiroplasma citri] Length = 430 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 137/504 (27%), Positives = 216/504 (42%), Gaps = 77/504 (15%) Query: 10 LDHPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + Y+VSE++Y+LK I+E NL ++ ++GEIS HSSGH YF++KD ++I AI Sbjct: 1 MSKNIYTVSEINYYLKTIIEQEPNLINISLQGEISNITN-HSSGHVYFTIKDEKAQIRAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ ++F +EG++ + G I + Y + + +L G GTL E K++L Sbjct: 60 MFAFNAKNLQFKLKEGLKIIATGSIKVYEPQGTYSLQVVALSLQGVGTLFLKYEALKQEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++G F K PIP P I VIT+PTGA IRDI+ I RFP + +FP VQG E Sbjct: 120 SKKGWFGQSLKKPIPRFPNNIGVITAPTGAAIRDIISTIHRRFPQANIYLFPSLVQGSEA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I I + P D +I+ RGGGSIEDLW FN+ +V AI ++IP+ISA Sbjct: 180 KHDIRAKIKAAQSFT-----PHLDTLIVGRGGGSIEDLWAFNELEVVEAIYQTTIPVISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+TLAD+ +DLRAPTPT AAE+A Sbjct: 235 VGHEIDFTLADFVSDLRAPTPTAAAELAT------------------------------- 263 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 P+ + ++ + + L ++ I + + + N Sbjct: 264 --------PDQKELINYLQQQRRNLINF----VKGRIDKIGDKLSELKNSYVLTRPQALY 311 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + + I+ Sbjct: 312 TQYEHSYQLLLKQFNVLQETFF-------------------------IANKNMIQNYYQT 346 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + +I + + L + TL RGY+ + N N I+ ++ I+ Sbjct: 347 LVRTIKQQILALEHEKNNLVSKLDLLSPLKTLTRGYSITYNDNKNVISTTHDIKNNDIII 406 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 DG ++IV E+ K Sbjct: 407 TRVQDGFIHSIVQAINKDGEKNDK 430 >gi|291279480|ref|YP_003496315.1| exodeoxyribonuclease VII large subunit [Deferribacter desulfuricans SSM1] gi|290754182|dbj|BAI80559.1| exodeoxyribonuclease VII, large subunit [Deferribacter desulfuricans SSM1] Length = 446 Score = 310 bits (793), Expect = 5e-82, Method: Composition-based stats. Identities = 137/491 (27%), Positives = 228/491 (46%), Gaps = 55/491 (11%) Query: 15 YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSEL+ +K+I+E++ V V GEIS Y + S GH YF+LKD++++I + +K Sbjct: 4 LTVSELTNKIKNILENSFTGPVSVVGEISNY-SVSSLGHCYFTLKDDNAQIKCVFFKRYR 62 Query: 74 NKIE-FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + + P+ G + +V G +T + YQII++ + G E+ K+KL +EG Sbjct: 63 ILLRDYEPKNGDKVVVTGDLTVYEKDGLYQIIVKKIEYDSVGDFYKKFEETKRKLEKEGF 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191 F K IP + K +A+ITSPTGA I+D ++ I + V I+P VQGD+ I Sbjct: 123 FDSDLKKEIPKLVKRVAIITSPTGAAIKDFIRTIKKNSVNMIVDIWPAPVQGDDAIPIII 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + I ++N + DI+IL RGGGS+EDL FNDE + R++ +S IP ISAIGHE Sbjct: 183 DQITKINNFVDY-----YDILILMRGGGSLEDLSIFNDEFLARSLFHSKIPTISAIGHER 237 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ D+ ADLR TPT AAE ++ + NL L + + + L++L Sbjct: 238 DFTICDFVADLRVATPTAAAEKVSEYYVTIEEKIDNLTKHLIKEMEYKLMNNLQYLDTLD 297 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 + + R ++ + LE L ++ +N + Sbjct: 298 ARI-QKNSPYQKVRTKIQEITLMERKILEN--------------------LKSSLFQNEK 336 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++E + IE+ E ++ + + + I ++ IL Sbjct: 337 IVVEYLRRIER------------------------ENPMYKLENFNIKVDQFIKNMKTIL 372 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 K++ + V L +N L++GY + + N + ++ + + I D Sbjct: 373 LGKLEVLNNRVDSMMNSLNLTNPENILEKGYAIVL-QDKNPVVSVNSVHLEDELEIKMKD 431 Query: 492 GQANAIVINKA 502 G N V K Sbjct: 432 GYINIFVTGKK 442 >gi|293400616|ref|ZP_06644761.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305642|gb|EFE46886.1| exodeoxyribonuclease VII, large subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 442 Score = 309 bits (792), Expect = 6e-82, Method: Composition-based stats. Identities = 128/496 (25%), Positives = 234/496 (47%), Gaps = 59/496 (11%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + P SV +L ++LK ++ NL + ++GEIS + H SGH YF+LKD ++I + Sbjct: 1 MKQPLLSVYDLVHYLKQTLDHDPNLQTLLIQGEISNFTN-HRSGHWYFTLKDKKAKISCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ ++ L +EG++ +V +++ + Q+ + + G G L LE KK++ Sbjct: 60 MFSSYASRCSILLKEGMKVIVRAEVSMYEPQGSLQLYVTHVQVDGLGDLYLKLEAVKKQM 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF+ + K +P P IAVI++ +GA ++D+L I+ R+PL V ++P VQG Sbjct: 120 AKEGLFALERKKALPLYPMDIAVISAKSGAAVQDVLTTIARRWPLANVHVYPSLVQGINA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++ + + + ++ D+I+L RGGG+IEDLW FN+E + R I++ I++ Sbjct: 180 ADDLIRNLKKADEMEH-------DVILLVRGGGAIEDLWCFNEERVARCISSMKSVIVTG 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL DY +D RAPTPT AAE+ P +E + L++L++R+ I+ ++ + Sbjct: 233 VGHETDTTLVDYVSDARAPTPTAAAELITPQREEILMQLMHLKSRMKQIMNHRLQEEK-- 290 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 ++L RY D L E +++ + + + Sbjct: 291 ---------AVLESLKQHRYMSDPLSYIRESQMKLAMQAREMGMIE-----------QRL 330 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 K+R + E + Q++ K+ + Sbjct: 331 LKHRHTVQEYANRLA-------------------------HQSQQIAQKKQAEKAKVWIQ 365 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + L + T++ +L +++ N LKRGY + + I ++ ++ + Sbjct: 366 LAHALQEYQRKQQTTLYKQISLLDAYSPLNVLKRGYAIAETKD-TLIKSIDDVQEESLMR 424 Query: 487 INFFDGQANAIVINKA 502 I DG +A V K Sbjct: 425 IRLVDGFLHACVKKKE 440 >gi|322372791|ref|ZP_08047327.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C150] gi|321277833|gb|EFX54902.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C150] Length = 446 Score = 309 bits (792), Expect = 6e-82, Method: Composition-based stats. Identities = 146/494 (29%), Positives = 234/494 (47%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ +LK + + L V + G++S +R S H YFSLKD + I A IW G Sbjct: 5 LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNFRRRPS--HQYFSLKDEGAVIQATIWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ +KKL +G Sbjct: 63 FKKLGFDLEEGMKINVVGRVQIYEPSGSYSIIIEKAEPDGVGALALQFEQLRKKLTAQGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P K + V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDERHKQALPNFVKRVGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V++I S +P+IS++GHET Sbjct: 183 ENIQRANQR------DDLDLLIVGRGGGSIEDLWAFNEEVVVQSIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P K + + R +R I+Y L L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVSKADTLVWIRERQNRAYQACLRRIQYNQERLAKL 296 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 +++ ++ +LD+L LE ++ RK + + R++ L+ +++ Sbjct: 297 SQSIVFRQPERLYDGYLQKLDQLTTRLETLIKQEFERKQKETALLSQRLQGLNLLASVEN 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + Q+ + Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + + L S + RGY + + ++ +T +++ ++ I Sbjct: 370 TTTKNTLNGYRVRLEKAQEALLSLDTSRIVARGYAIV-NKDDKPLTTIKDITEGDQLTIQ 428 Query: 489 FFDGQANAIVINKA 502 DG+ V N Sbjct: 429 MRDGELEVEVKNVN 442 >gi|288904838|ref|YP_003430060.1| exonuclease VII, large subunit [Streptococcus gallolyticus UCN34] gi|288731564|emb|CBI13119.1| putative exonuclease VII, large subunit [Streptococcus gallolyticus UCN34] Length = 442 Score = 309 bits (792), Expect = 6e-82, Method: Composition-based stats. Identities = 148/492 (30%), Positives = 228/492 (46%), Gaps = 62/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD ++ I A +W GT Sbjct: 5 LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G GTL E+ KKKL E G Sbjct: 63 FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGTLAIQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLADY AD RA TPT AAE+A PV + S I + + L Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIVSWIAERQNRAYQASLRVIKQKQERLDKL 296 Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LDRL +L + ++ + + + R+ + L +I++ Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLTNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + Q+ + + Sbjct: 357 YQERLEAFQRLLISNMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY +Q N I+ ++ ++ + Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVTVGDQLTVR 428 Query: 489 FFDGQANAIVIN 500 DGQ V + Sbjct: 429 LKDGQLEVEVKD 440 >gi|228476892|ref|ZP_04061537.1| exodeoxyribonuclease VII, large subunit [Streptococcus salivarius SK126] gi|228251466|gb|EEK10611.1| exodeoxyribonuclease VII, large subunit [Streptococcus salivarius SK126] Length = 442 Score = 309 bits (792), Expect = 6e-82, Method: Composition-based stats. Identities = 153/494 (30%), Positives = 231/494 (46%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ +LK + + L V + G++S +R S H YFSLKD + I A IW G Sbjct: 5 LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNFRRRPS--HQYFSLKDEGAVIQATIWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ +KKL EG Sbjct: 63 FKKLGFELEEGMKINVVGRVQIYEPSGSYSIIIEKAEPDGIGALAIQFEQLRKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK +P K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDDRHKQALPNFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V++I S +PIIS++GHET Sbjct: 183 ENIQKANQR------DDLDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P K + + R +R I+Y L L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVSKADTLVWIRERQNRAYQACLRRIQYNQERLAKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LDRL LE + RK + + R++ L+ ++Q Sbjct: 297 SQSVVFRQPERLYDGYLQKLDRLTTRLETFMSQDFERKQKEAELLRQRLQGLNLLTSVQN 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + Q+ + Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + I + L S + RGY ++ ++ +T +N+ ++ + Sbjct: 370 TTTKNTINGKRVRLEKAQDALLSLDTSRIVARGYAIVK-KDDKPLTSTKNITEGDQLTVQ 428 Query: 489 FFDGQANAIVINKA 502 DG+ V N Sbjct: 429 MRDGELEVEVKNVN 442 >gi|325977770|ref|YP_004287486.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177698|emb|CBZ47742.1| exodeoxyribonuclease VII large subunit [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 442 Score = 309 bits (792), Expect = 6e-82, Method: Composition-based stats. Identities = 146/492 (29%), Positives = 227/492 (46%), Gaps = 62/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD ++ I A +W GT Sbjct: 5 LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ KKKL E G Sbjct: 63 FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLADY AD RA TPT AAE+A PV + S I + + L Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERQNRAYQASLRVIKQKQERLDKL 296 Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LDRL +L + ++ + + + R+ + L +I++ Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLTNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + ++ + + Sbjct: 357 YQERLEAFRRLLISNMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY +Q N I+ ++ ++ + Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVTVGDQLTVR 428 Query: 489 FFDGQANAIVIN 500 DGQ V + Sbjct: 429 LKDGQLEVEVKD 440 >gi|89895099|ref|YP_518586.1| hypothetical protein DSY2353 [Desulfitobacterium hafniense Y51] gi|122482497|sp|Q24V00|EX7L_DESHY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|89334547|dbj|BAE84142.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 406 Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats. Identities = 139/364 (38%), Positives = 210/364 (57%), Gaps = 12/364 (3%) Query: 11 DHP-EYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + P ++V+EL+ + + + + V GEIS Y+ SGH YF+LKD S + + Sbjct: 3 NVPKIWTVAELTREIGQTLNDNPDFVNCWVSGEISNYKNHRPSGHWYFTLKDEQSSMKGV 62 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P++G++ LV G I + Q+ E + PSG G L A E+ K++L Sbjct: 63 MFRSRAERVRFTPQDGMKVLVRGSIRIYERDGTIQLYAEEMQPSGVGALYLAFEQLKERL 122 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+ + K IP P+ I ++TSPTGA I+DIL+ + R P + I+ P VQG+ Sbjct: 123 GQEGLFAPERKKAIPRYPRRIGIVTSPTGAAIKDILKVMFRRNPQISWILAPAAVQGELA 182 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 PKE+A AI +LN + D+II+ RGGGS+E+LW FN E + RAIA S IP+ISA Sbjct: 183 PKEVAQAIARLNRHSQ------VDVIIVGRGGGSLEELWAFNTEEVARAIAASGIPVISA 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD ADLRAPTP+ AAE+AVPV L+S L LEARL++ + ++ K Sbjct: 237 VGHETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQR 296 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+SL L N + +R RLD L +E + + K + ++ + Sbjct: 297 LDSLKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLA 356 Query: 365 NIQK 368 + + Sbjct: 357 ILGR 360 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 54/168 (32%), Gaps = 5/168 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ +++ + E + +EQ+ + + + + K L Sbjct: 239 HETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQRLD 298 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L RI + L R+E ++ + + + + T L + L Sbjct: 299 SLKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLAIL 358 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 RGY+ N + + ++ ++ + G V+ K+ + Sbjct: 359 GRGYSLTYGPKGNVLRKSDDINVGQQVQVRLQQGILTCAVLAKSVDSD 406 >gi|88604237|ref|YP_504415.1| exodeoxyribonuclease VII, large subunit [Methanospirillum hungatei JF-1] gi|88189699|gb|ABD42696.1| Exodeoxyribonuclease VII large subunit [Methanospirillum hungatei JF-1] Length = 472 Score = 309 bits (791), Expect = 8e-82, Method: Composition-based stats. Identities = 133/490 (27%), Positives = 224/490 (45%), Gaps = 56/490 (11%) Query: 17 VSELSYHLKHIVES-NLSHVCVRGEISGYRGIHSSGHAYFSLKD----NHSRIDAIIWKG 71 VSE+S + ++E +L ++ + GEI+ ++ HSSGH YFSL + S + IWK Sbjct: 28 VSEVSRMITRLLEDPSLQNIWIIGEITNFK-RHSSGHLYFSLSEQIAGKESVVSCAIWKS 86 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++F P++G+E G I+ + +Y I + PSG+G +E ++++ +G Sbjct: 87 AARYLDFTPDDGMEVRAYGSISHYEPGGRYSFQITQMRPSGAGERALLIEGWRREMAAKG 146 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 FS K P P I V+TS TGAVI DI IS RFP +I+ P VQG +EIA Sbjct: 147 WFSPDRKRIPPRYPVRIGVVTSSTGAVIHDIRNVISKRFPAEIILSPTMVQGASAHEEIA 206 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI+++ + D+II+ RGGGS EDL+ FN +V AI +P+I+AIGHE Sbjct: 207 RAIIRVQDM--------VDVIIVGRGGGSYEDLFAFNHPCVVEAIVTCPVPVIAAIGHEV 258 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD AAD+ A TP+ AAE VP +E +LI++ R+ ++ ++ LN + Sbjct: 259 DITLADLAADVSASTPSHAAEQCVPDRESELDALIHMRKRMFLQLMNRLESAQEDLNGIR 318 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + + L R R + L Sbjct: 319 DRLSSP-RLLREVRMRQEALA--------------------------------------- 338 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + ++ + Q +K + E + ++ + L + + + ++ R+ + Sbjct: 339 DLTDRMERGAQGLKDRAQSRLAELRGRLEGRNPLVY-LRRELPERKNFLAEIKGRLSCAV 397 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++++ ++ + IL++ + + GY + I L + I D Sbjct: 398 QVRLQAERAELTSLSAILKARGPEALFQAGYCMVSSA-GTVIRSCTELTPGKMVTIRLRD 456 Query: 492 GQANAIVINK 501 G A+A + Sbjct: 457 GTADAAITQV 466 >gi|259501556|ref|ZP_05744458.1| exodeoxyribonuclease VII [Lactobacillus iners DSM 13335] gi|302191470|ref|ZP_07267724.1| exodeoxyribonuclease VII large subunit [Lactobacillus iners AB-1] gi|309809494|ref|ZP_07703352.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN 2503V10-D] gi|312871853|ref|ZP_07731937.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 3008A-a] gi|312872421|ref|ZP_07732490.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 2062A-h1] gi|312874449|ref|ZP_07734479.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 2052A-d] gi|312874529|ref|ZP_07734554.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 2053A-b] gi|315653401|ref|ZP_07906323.1| exodeoxyribonuclease VII large subunit [Lactobacillus iners ATCC 55195] gi|325911880|ref|ZP_08174284.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII 143-D] gi|325913428|ref|ZP_08175794.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII 60-B] gi|329919863|ref|ZP_08276801.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN 1401G] gi|259167074|gb|EEW51569.1| exodeoxyribonuclease VII [Lactobacillus iners DSM 13335] gi|308170166|gb|EFO72201.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN 2503V10-D] gi|311089920|gb|EFQ48339.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 2053A-b] gi|311090061|gb|EFQ48475.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 2052A-d] gi|311092003|gb|EFQ50378.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 2062A-h1] gi|311092575|gb|EFQ50935.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LEAF 3008A-a] gi|315489326|gb|EFU78966.1| exodeoxyribonuclease VII large subunit [Lactobacillus iners ATCC 55195] gi|325476386|gb|EGC79548.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII 143-D] gi|325477197|gb|EGC80343.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners UPII 60-B] gi|328936953|gb|EGG33383.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners SPIN 1401G] Length = 452 Score = 309 bits (791), Expect = 8e-82, Method: Composition-based stats. Identities = 136/498 (27%), Positives = 225/498 (45%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +V++L+++L +++ L V ++GE+S +R +S YFSLKD S+I+A+ Sbjct: 3 TSPKYLTVTDLNFYLSKKFKNDPYLHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAV 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F EG++ V G I + YQ + ++ P+G G L L + ++KL Sbjct: 62 MYKSFFEKVKFKLVEGMKVYVSGYIDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+D HK IP P IAV+TS +GAVI DI+ + RFP + + +FP VQG + Sbjct: 122 DKEGLFADSHKKKIPKFPDKIAVVTSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I ++ Q+ + + D++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS+ Sbjct: 182 AASIIASLQQIAA-----SQDKYDVVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISS 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL+D AD RA TPT AAE A P + +I L L I +I Sbjct: 237 VGHETDTTLSDLVADKRAATPTAAAEYATPELSAITLQIIELRTHLYAAIRSIINSDKIL 296 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N L + LD L ++LE + + + + S Sbjct: 297 FNRTKNSVFLREPQRFYDEKMQTLDLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQ 356 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ + Q ++ K Q Sbjct: 357 IIKHHYQELIFKTQ---------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + I + + ++ L + + RGY + + +T + Sbjct: 371 -NLNKSMCYLINNNKNNFYNLSQKLDDNSPLKAISRGYVYTANEDGKTVTSVHQICENDI 429 Query: 485 ILINFFDGQANAIVINKA 502 + +NF DG V+ Sbjct: 430 LNLNFKDGLVKTRVLKIK 447 >gi|219669512|ref|YP_002459947.1| exodeoxyribonuclease VII large subunit [Desulfitobacterium hafniense DCB-2] gi|219539772|gb|ACL21511.1| exodeoxyribonuclease VII, large subunit [Desulfitobacterium hafniense DCB-2] Length = 403 Score = 309 bits (791), Expect = 8e-82, Method: Composition-based stats. Identities = 138/361 (38%), Positives = 208/361 (57%), Gaps = 11/361 (3%) Query: 13 PEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 ++V+EL+ + + + + V GEIS Y+ SGH YF+LKD S + ++++ Sbjct: 3 KIWTVAELTREIGQTLNDNPDFVNCWVSGEISNYKNHRPSGHWYFTLKDEQSSMKGVMFR 62 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ F P++G++ LV G I + Q+ E + PSG G L A E+ K++L +E Sbjct: 63 SRAERVRFTPQDGMKVLVRGSIRIYERDGTIQLYAEEMQPSGVGALYLAFEQLKERLGQE 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF+ + K IP P+ I ++TSPTGA I+DIL+ + R P + I+ P VQG+ PKE Sbjct: 123 GLFAPERKKAIPRYPRRIGIVTSPTGAAIKDILKVMFRRNPQISWILAPAAVQGELAPKE 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A AI +LN + D+II+ RGGGS+E+LW FN E + RAIA S IP+ISA+GH Sbjct: 183 VAQAIARLNRHSQ------VDVIIVGRGGGSLEELWAFNTEEVARAIAASGIPVISAVGH 236 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD T+AD ADLRAPTP+ AAE+AVPV L+S L LEARL++ + ++ K L+S Sbjct: 237 ETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQRLDS 296 Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L N + +R RLD L +E + + K + ++ + + Sbjct: 297 LKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLAILG 356 Query: 368 K 368 + Sbjct: 357 R 357 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 54/168 (32%), Gaps = 5/168 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ +++ + E + +EQ+ + + + + K L Sbjct: 236 HETDVTIADMVADLRAPTPSAAAELAVPVWRELKSDLEQLEARLHSTMSSQLQRKRQRLD 295 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L RI + L R+E ++ + + + + T L + L Sbjct: 296 SLKTIGPLSNPFWRIDQNRQRLDSLSERVEQGMTRFVSDKNGILKLLTAKLDLLSPLAIL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 RGY+ N + + ++ ++ + G V+ K+ + Sbjct: 356 GRGYSLTYGPKGNVLRKSDDINVGQQVQVRLQQGVLTCAVLAKSVDSD 403 >gi|153839145|ref|ZP_01991812.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AQ3810] gi|149747357|gb|EDM58331.1| exodeoxyribonuclease VII, large subunit [Vibrio parahaemolyticus AQ3810] Length = 355 Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 198/356 (55%), Gaps = 10/356 (2%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + ++VS L+ ++ ++E+ + V + GEIS + SGH Y +LKD+ +++ ++ Sbjct: 5 TNQNIFTVSRLNAEVRLLLENEMGIVWLVGEISNFSA-PVSGHWYLTLKDSRAQVKCAMF 63 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F P G + LV +++ + YQ+IIES+ P G G L E+ K KL Sbjct: 64 RGNNRRVTFKPANGNQVLVKARLSLYEPRGDYQLIIESMQPEGDGRLQQEFEELKMKLAA 123 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF+ +K P+P PK + +ITS TGA + DIL + R P L V+I+P VQGD+ Sbjct: 124 EGLFAQTNKLPLPEHPKRVGIITSKTGAALYDILDVLKRRDPSLPVVIYPTMVQGDDAAI 183 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA AI + N+ E D++I+ RGGGS+EDLW FN+E++ R IA S IPIISA+G Sbjct: 184 QIAQAIGRANSRNE------CDVLIVGRGGGSLEDLWCFNNEILARTIAASQIPIISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D T+AD+ AD+RAPTP+ AAE+ H SL+ + +L + + + + Sbjct: 238 HEVDMTIADFVADVRAPTPSAAAELVSRDNSHKDQSLVAKQHKLASAMRYYLSQQKQQSA 297 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 LL L + L +LD L L ++ I + + +R++ + Sbjct: 298 QLLHRLERQHPSYQLQRQSQQLDELDMRLRRAMQRFIDTRQQAVERKHHRLQLNSP 353 Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 2/93 (2%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + Q ++ KQ + ++ +L + + + L R+ ++ + +L Sbjct: 265 RDNSHKDQSLVAKQHKLASAMRYYLSQQKQQSAQLLHRLE--RQHPSYQLQRQSQQLDEL 322 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 R+ + I + +V LQ + Sbjct: 323 DMRLRRAMQRFIDTRQQAVERKHHRLQLNSPVK 355 >gi|302389867|ref|YP_003825688.1| Exodeoxyribonuclease VII large subunit [Thermosediminibacter oceani DSM 16646] gi|302200495|gb|ADL08065.1| Exodeoxyribonuclease VII large subunit [Thermosediminibacter oceani DSM 16646] Length = 410 Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 138/364 (37%), Positives = 205/364 (56%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + P +VSEL+ +K++ +SN L V VRGEIS ++ H SGH YF LKD ++I + Sbjct: 1 MAAPVLTVSELTGIIKYLFDSNEILRQVYVRGEISNFK-YHLSGHIYFVLKDEKAQIRCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K + F+PE G+ + G +T + + +YQ+ ++ + P G G L A EK K KL Sbjct: 60 MFKNKSVLLPFMPENGMRVVAFGYVTVYEKNGEYQLYVDDMEPDGIGALYLAYEKLKAKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K IPF+PK I +ITS GA I+D+L I RFP + ++I PV VQG + Sbjct: 120 QKEGLFDANRKKAIPFLPKNIGIITSINGAAIKDLLTVIRRRFPNVNILIAPVSVQGKQA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI AI LN + + D+II+ARGGGSIE+LW FN+E + RAI +S IPIISA Sbjct: 180 ADEICEAIKDLNRI------GKLDVIIVARGGGSIEELWTFNEEKVARAIYSSRIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ AD RAPTP+ A EM VP K L + + + R+ + + + Sbjct: 234 VGHETDYTIADFVADKRAPTPSAAGEMVVPEKNQLLADIDQRKKRIIAAMCAFLNTRKQG 293 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + + + + +R +LD L R L I K ++ R+ + Sbjct: 294 IEYIRRSVVFRKLRSEVDNNRIQLDVLTRRLLRETMNQITVKKSALKSLMGRLDVLSPLS 353 Query: 365 NIQK 368 + + Sbjct: 354 VLDR 357 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 53/139 (38%), Gaps = 2/139 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK-EKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q + + Q ++I+ ++ K+ + ++ + ++ + + L R Sbjct: 264 EKNQLLADIDQRKKRIIAAMCAFLNTRKQGIEYIRRSVVFRKLRSEVDNNRIQLDVLTRR 323 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRI 485 + ++I +++ L + + L RGY+ Q ++ + + +++ + Sbjct: 324 LLRETMNQITVKKSALKSLMGRLDVLSPLSVLDRGYSICQTIDDLRIVKRVEEVSSGEEV 383 Query: 486 LINFFDGQANAIVINKAPP 504 + +G V +K Sbjct: 384 KVILSNGYLLCEVRSKGKK 402 >gi|309804240|ref|ZP_07698317.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LactinV 11V1-d] gi|309805566|ref|ZP_07699611.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LactinV 09V1-c] gi|308163643|gb|EFO65913.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LactinV 11V1-d] gi|308165217|gb|EFO67455.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LactinV 09V1-c] Length = 445 Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 58/494 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +V++L+++L +++ L V ++GE+S +R +S YFSLKD S+I+A+ Sbjct: 3 TSPKYLTVTDLNFYLSKKFKNDPYLHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAV 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F EG++ V G I + YQ + ++ P+G G L L + ++KL Sbjct: 62 MYKSFFEKVKFKLVEGMKVYVSGYIDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF+D HK IP P IAV+TS +GAVI DI+ + RFP + + +FP VQG + Sbjct: 122 DKEGLFADSHKKKIPKFPDKIAVVTSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I ++ Q+ + + D++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS+ Sbjct: 182 AASIIASLQQIAA-----SQDKYDVVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISS 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL+D AD RA TPT AAE A P + +I L L I +I Sbjct: 237 VGHETDTTLSDLVADKRAATPTAAAEYATPELSAITLQIIELRTHLYAAIRSIINSDKIL 296 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N L + LD L ++LE + + + + S Sbjct: 297 FNRTKNSVFLREPQRFYDEKMQTLDLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQ 356 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I+ + Q ++ K Q Sbjct: 357 IIKHHYQELIFKTQ---------------------------------------------- 370 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + + I + + ++ L + + RGY + + +T + Sbjct: 371 -NLNKSMCYLINNNKNNFYNLSQKLDDNSPLKAISRGYVYTANEDGKTVTSVHQICENDI 429 Query: 485 ILINFFDGQANAIV 498 + +NF DG V Sbjct: 430 LNLNFKDGLVKTRV 443 >gi|52548905|gb|AAU82754.1| exonuclease VII large subunit [uncultured archaeon GZfos19C8] Length = 447 Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 132/363 (36%), Positives = 211/363 (58%), Gaps = 8/363 (2%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 YSV E++ +++ ++ + LS V V+GE+S +SGH YF+LKD S + ++ Sbjct: 40 TQHIYSVQEVTSYIRRRLDEDSMLSDVYVKGELSNL-SQPTSGHLYFTLKDKFSELRCVM 98 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F PE+G+ ++ G I+ + YQ+ ++ L G G L A E+ KKKL Sbjct: 99 FRDKNRGLKFRPEDGMSVILRGHISVYERRGSYQLYVDELQAEGIGALYLAFEQLKKKLK 158 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF ++K PIP P+ I +ITSPTGA IRD+L RFP + +++ PV VQG+E P Sbjct: 159 GEGLFDPKYKKPIPSFPRKIGIITSPTGAAIRDMLNITKRRFPHVHILLAPVAVQGEEAP 218 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I NAI +N + E R + D+++L RGGGSIE+LW FN+E + R I S IP+ISA+ Sbjct: 219 GQIVNAIRLMNRVNEER--MKIDVLVLGRGGGSIEELWAFNEEAVAREIFASKIPVISAV 276 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+ AD RA TP+ AAE+AVP K ++ +L +L R+ I I+Y L Sbjct: 277 GHETDFTIADFVADRRAATPSEAAELAVPDKREIERNLSSLALRMQQNIYNTIEYHRKRL 336 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S+ K + + ++ R +D L R + ++ + + ++ + + Sbjct: 337 ESIEKNILFRKPTERINQHRQTVDELKRTIFAASTHLVILHRKSLQALTGKLDALSPLSI 396 Query: 366 IQK 368 + + Sbjct: 397 LDR 399 Score = 98.3 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 57/140 (40%), Gaps = 3/140 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427 ++ I + ++Q++ ++++ + ++L + RI + +L I Sbjct: 307 KREIERNLSSLALRMQQNIYNTIEYHRKRLESIEKNILFRKPTERINQHRQTVDELKRTI 366 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486 +H + S+ T L + + + L RGY+ + + I +++ + Sbjct: 367 FAASTHLVILHRKSLQALTGKLDALSPLSILDRGYSICSRLPDGKIIRSVEDISVGVVLT 426 Query: 487 INFFDGQANAIVINKAPPKE 506 I F DG+A + V K K+ Sbjct: 427 ILFTDGEATSEVKEKWTKKK 446 >gi|113866636|ref|YP_725125.1| exodeoxyribonuclease VII large subunit [Ralstonia eutropha H16] gi|113525412|emb|CAJ91757.1| Exodeoxyribonuclease VII, large subunit [Ralstonia eutropha H16] Length = 476 Score = 308 bits (790), Expect = 1e-81, Method: Composition-based stats. Identities = 130/504 (25%), Positives = 222/504 (44%), Gaps = 57/504 (11%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +P S V EL++ + ++E + VRGEIS + +SGH YFSLKD Sbjct: 25 DPSSTAPRSGRDVIPVGELNHTIARLLERSFPLAWVRGEISNFT-RAASGHWYFSLKDAR 83 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++I ++++G ++F P EG V +T + + Q+ +E++ +G G L A Sbjct: 84 AQIRCVMFRGRNQHVDFQPREGEAVEVRAVVTMYEARGEVQLGVEAMRRAGLGNLYEAFL 143 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180 + K+KL + GLF+ + K P+P P+ I V+TS A +RD+L + R + V+++PV Sbjct: 144 RLKEKLAQAGLFAPERKRPVPAHPRTIGVVTSLQAAALRDVLTTLRRRAPHVPVLVYPVP 203 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG ++IA+ + + +E D++IL RGGGSIEDLW FN+E++ +AIA + Sbjct: 204 VQGAGAAQKIADMLDAASARRE------CDVLILCRGGGSIEDLWSFNEEVVAQAIARCA 257 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+IS +GHETD+T+AD+ AD+RAPTPTGAAE+ P + HL + + L + R + Sbjct: 258 LPVISGVGHETDFTIADFVADVRAPTPTGAAELVSPDRAHLLAQAMRARDALTQCMRRGL 317 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ L + + + L R R+D L R L L + + + R + Sbjct: 318 DLRAQHLDWLARRVRSPQAQLQERRARVDNLARHLRSALRDTVVSQRHRQQLLAMRWSAC 377 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + Q ++ + L +L Sbjct: 378 RPDASAAHA--DVARLWQRLQAAAVRQHERAGQRLARSAGALELL--------------- 420 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++ RGY + D + + Sbjct: 421 ---------APQRTLE-----------------------RGYAVLLDQRGRALRSPAEIR 448 Query: 481 TKTRILINFFDGQANAIVINKAPP 504 + + + G A+ + Sbjct: 449 AGSVVEAHLAKGVADLAIAGVQAK 472 >gi|296876936|ref|ZP_06900981.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis ATCC 15912] gi|296432067|gb|EFH17869.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis ATCC 15912] Length = 463 Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 228/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A +W Sbjct: 19 SNYLSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVW 76 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G F EEG++ VIG+I + S Y I+IE P G G L E+ KKKL E Sbjct: 77 AGVYRSFGFELEEGMKINVIGRIQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLTE 136 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF DQ K +P P+ I VITS +GAVIRDI+ +S RFP + ++++P KVQG+ Sbjct: 137 EGLFQDQWKQALPQFPRKIGVITSQSGAVIRDIITTVSRRFPGVEIVLYPTKVQGEGASS 196 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+ I + N D++I+ RGGGSIEDLW FN+E +VRAI S IPIIS++G Sbjct: 197 EVVANIQRANQR------DDLDVLIIGRGGGSIEDLWAFNEEAVVRAIFESRIPIISSVG 250 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR-LNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + S + + + + + Y L Sbjct: 251 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLSHLQKQENRMATAMSNRLAYNRERL 310 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ++ ++D+L L+ + + + +R+++ +H Sbjct: 311 AKLSQSVIFRQPERLYDGYLQKIDQLQLRLKQGMRDAYGQGANQLQGLRHRLEATSPLHR 370 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I++ + +L+ ++ + Sbjct: 371 IERYQDRLLQDKRILTNR------------------------------------------ 388 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +K V + L + RGY ++ ++ + + + Sbjct: 389 -----MEQVLKEQKIKVQGLSEALLMLDTSRIIARGYAMVK-QDDQVLDSVAKVKEGDPL 442 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 443 SLIMRDGQLEVEVKHVERKE 462 >gi|320546349|ref|ZP_08040666.1| exodeoxyribonuclease VII large subunit [Streptococcus equinus ATCC 9812] gi|320449003|gb|EFW89729.1| exodeoxyribonuclease VII large subunit [Streptococcus equinus ATCC 9812] Length = 442 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 151/491 (30%), Positives = 227/491 (46%), Gaps = 62/491 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD ++ I A +W GT Sbjct: 5 LSVSTLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ KKKL E G Sbjct: 63 FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPGGIGALAVQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191 F D+HK +P K I V+TSP+GAVIRDI+ +S RF + +++FP KVQG+ +E+A Sbjct: 123 FDDRHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFQGVEILLFPTKVQGEGASQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 N + + D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ------NNIAKASERDDLDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310 D TLADY AD RA TPT AAE+A PV + S E R+ +R IK L+ L Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWISERENRMYQASLRRIKQNQERLDKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LDRL L + ++ + + + R+ + I+ Sbjct: 297 ANSVIFRQPERLYDGYVQKLDRLTMSLTNTMKNQFNQAKQSHALLHQRLLALDFESQIKH 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 357 YQDKLQSLERLLLSNMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY +Q N I+ ++ ++ I Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEKVISSVSDVKVGDQLTIQ 428 Query: 489 FFDGQANAIVI 499 DGQ A V Sbjct: 429 LKDGQLEAEVK 439 >gi|55821225|ref|YP_139667.1| exodeoxyribonuclease VII large subunit [Streptococcus thermophilus LMG 18311] gi|116627951|ref|YP_820570.1| exodeoxyribonuclease VII large subunit [Streptococcus thermophilus LMD-9] gi|81820446|sp|Q5M3Z1|EX7L_STRT2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|122267453|sp|Q03K98|EX7L_STRTD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|55737210|gb|AAV60852.1| exodeoxyribonuclease VII, large subunit [Streptococcus thermophilus LMG 18311] gi|116101228|gb|ABJ66374.1| Exodeoxyribonuclease VII large subunit [Streptococcus thermophilus LMD-9] gi|312278539|gb|ADQ63196.1| Exodeoxyribonuclease 7 large subunit [Streptococcus thermophilus ND03] Length = 446 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 156/494 (31%), Positives = 231/494 (46%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ +LK + + L V + G++S YR S H YFSLKD + I A IW G Sbjct: 5 LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNYRRRPS--HQYFSLKDEGAVIQATIWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 KI F EEG++ V+G++ + S Y +IIE P G G L E+ +KKL EG Sbjct: 63 FKKIGFDLEEGMKINVVGRVQIYEPSGSYSLIIEKAEPDGIGALALQFEQLRKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK P+P K I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +EI Sbjct: 123 FDDRHKQPLPNFVKKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEIV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V++I S +P+IS++GHET Sbjct: 183 ENIQKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P K + + + R +R I+Y L L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPISKADTLAWIRERQNRAYQACLRRIQYNQERLAKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LDRL LE + RK + + R+ L ++ Sbjct: 297 SQSVVFRQPERLYDGYLQKLDRLTTRLETFMSQDFERKQKSAEFLRQRLHGLNLSTRVKN 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + Q+ + Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + I + L S + RGY + + N+ +T +++ ++ I Sbjct: 370 TTTKNTINGNRVRLEKAQDALLSLDTSRIVARGYAIV-NKNDKPLTTIKDITEGEQLTIQ 428 Query: 489 FFDGQANAIVINKA 502 DGQ V N Sbjct: 429 MRDGQLEVEVKNVN 442 >gi|125973351|ref|YP_001037261.1| exodeoxyribonuclease VII large subunit [Clostridium thermocellum ATCC 27405] gi|256005457|ref|ZP_05430420.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum DSM 2360] gi|281417551|ref|ZP_06248571.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum JW20] gi|125713576|gb|ABN52068.1| Exodeoxyribonuclease VII large subunit [Clostridium thermocellum ATCC 27405] gi|255990597|gb|EEU00716.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum DSM 2360] gi|281408953|gb|EFB39211.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum JW20] gi|316940417|gb|ADU74451.1| exodeoxyribonuclease VII, large subunit [Clostridium thermocellum DSM 1313] Length = 411 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 141/373 (37%), Positives = 222/373 (59%), Gaps = 14/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLK 58 M F N + +VS ++ ++K I+ +L S++ VRGEIS ++ HSSGH YF+LK Sbjct: 1 MGEFFSDNCDN--ILTVSAVNRYIKEIMSRDLILSNLWVRGEISNFK-YHSSGHMYFTLK 57 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D + + ++++ ++F+PE G++ +V G I+ F +YQ+ E + G G L Sbjct: 58 DENCSLKCVMFRTYNLHLKFMPENGMKVIVKGYISVFERDGQYQLYAEEMQNDGIGDLYI 117 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIF 177 A E+ K++L EGLF HK IPF+P+ I V+TS TG+VIRDI+ + RF + IF Sbjct: 118 AFEQLKRRLASEGLFDPAHKKKIPFMPRTIGVVTSATGSVIRDIMNILDRRFYNSYIKIF 177 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 PV+VQG+ EI++AI +LN D+IILARGGGS+E+LW FN+E++ R+I Sbjct: 178 PVRVQGETAALEISHAISKLN------EIGGVDVIILARGGGSLEELWPFNEEIVARSIF 231 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 NSSIP+ISA+GHETD+T+AD+ ADLRAPTP+ AAE+ +P K + + + L R+ + + Sbjct: 232 NSSIPVISAVGHETDYTIADFVADLRAPTPSAAAELVMPEKVTIINRIRELNVRMVDALQ 291 Query: 298 RLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R +K K + L L + R +LD L R+L+ ++ + R +I Sbjct: 292 RNVKQKRDMLKKLADSVVFRQPYDRIYQERMKLDILNRDLKKSMFASLERAGSKLGFLIG 351 Query: 356 RIKSDFLIHNIQK 368 ++ + + + + Sbjct: 352 KLDALSPLTILSR 364 Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 53/165 (32%), Gaps = 6/165 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + + I ++ + + + K+K +L Sbjct: 243 HETDYTIADFVADLRAPTPSAAAELVMPEKVTIINRIRELNVRMVDALQRNVKQKRDMLK 302 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L Q +RI+ + L ++ + ++ + + L + + L Sbjct: 303 KLADSVVFRQPYDRIYQERMKLDILNRDLKKSMFASLERAGSKLGFLIGKLDALSPLTIL 362 Query: 459 KRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 RGY I+ F+ ++ I ++ DG+ V K Sbjct: 363 SRGYGIIKSEEKGIFVKSVNDVDVGEGIEVSVKDGRLYCTVRKKE 407 >gi|45657463|ref|YP_001549.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|73919343|sp|Q72RZ7|EX7L_LEPIC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|45600702|gb|AAS70186.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 422 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 137/495 (27%), Positives = 212/495 (42%), Gaps = 79/495 (15%) Query: 11 DHPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 D SVSE++ +K+++ +L ++ VRGEIS Y SSGH YFSLKD S I Sbjct: 3 DSKPLSVSEVTRIIKNLISGSKDLKNIWVRGEISNY-SKASSGHIYFSLKDAGSLIRCTF 61 Query: 69 WKGTLNKIEFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 + + P +G E V G IT + Y + + + G G +L +EK K+KL Sbjct: 62 FNYSNKNYSGKPLSDGKEIQVYGTITLYEAGGSYNLNVTRVEELGQGDILLQIEKLKQKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EG+F + K IP PK + + TSPTGA I DI++ RFP + ++I P VQG++ Sbjct: 122 AVEGIFDPEKKRRIPSFPKTLGIATSPTGAAIEDIIKISRSRFPGINILIAPCIVQGEDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P I AI +LN + D+II RGGGS EDL FNDE +VRA ANS IPIISA Sbjct: 182 PDSIVAAIEELN-----HPNWKVDVIIAGRGGGSFEDLMAFNDEKVVRAYANSRIPIISA 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GH+TD L+D+AAD PTPT AAE A+P +E + Sbjct: 237 VGHQTDVLLSDFAADHFTPTPTAAAEYAIPKEEDVL------------------------ 272 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L +L ++ +L I + + + + Sbjct: 273 -------------------QFLSQLEGRIKSSLVTKISSNRDRLRLLSGKFIFKEPMQLL 313 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q + E +++ + N++ +++ Sbjct: 314 NQRSQRVDEIGIRLQKAL-------------------------SNKLNLARVRLERY-QN 347 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + + T ++ + T+KRGY+ +++ N I + + Sbjct: 348 LTSRIQNILFHKKQKAEFWTSKVEDLSPAATMKRGYSILRNENGKIIRSPEETKPEEELQ 407 Query: 487 INFFDGQANAIVINK 501 + G I K Sbjct: 408 VLLSGGTMQVIRKGK 422 >gi|225018825|ref|ZP_03708017.1| hypothetical protein CLOSTMETH_02775 [Clostridium methylpentosum DSM 5476] gi|224948385|gb|EEG29594.1| hypothetical protein CLOSTMETH_02775 [Clostridium methylpentosum DSM 5476] Length = 398 Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats. Identities = 139/379 (36%), Positives = 208/379 (54%), Gaps = 12/379 (3%) Query: 13 PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P YSVSE++ +K I E + +RGEIS + SGH YF+LKD S I ++++ Sbjct: 2 PSYSVSEVNRFIKQIFAAEDIFYGLHIRGEISNFVNHVRSGHFYFTLKDQTSSIKCVMFR 61 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 +++ FLPE G+ ++ G + F YQ+ + + P G+G L A E+ KKKL E Sbjct: 62 SNASRLPFLPENGMNVILRGDVQVFERDGVYQVYVADIQPDGTGALYMAYEQLKKKLDAE 121 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189 GLF Q K P+P P I VITS TGA ++DIL + R+P+ V +FP VQG++ P+ Sbjct: 122 GLFDPQRKRPLPPYPGAIGVITSKTGAALQDILNILRRRYPVCTVKLFPALVQGEQAPES 181 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I A + N D++I+ RGGGS+EDLW FNDE + RAIA +P+ISA+GH Sbjct: 182 IIQAFARANRTP-------LDLVIVGRGGGSLEDLWAFNDEGVARAIAGCRVPVISAVGH 234 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+T+AD+AADLRAPTP+ AAE+AVP +L++ + N + N + ++ L+S Sbjct: 235 EVDYTIADFAADLRAPTPSAAAELAVPDIVNLRTMIDNYAEMVYNYTVSSLQNGEQQLDS 294 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L L S + L+ L L + E + R + F ++S + + Sbjct: 295 LSTRLMARAPGAVLEHSCHSLESLDSRLHLSFEGMYGRCGQRFAAAAGMLESLSPLKVLT 354 Query: 368 KNRQHILEKQQHIEQIVKQ 386 + +K I + +Q Sbjct: 355 RGYSITFDKSGKIARSAEQ 373 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 5/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 +++ + I+ + I+ + Y + L Sbjct: 234 HEVDYTIADFAADLRAPTPSAAAELAVPDIVNLRTMIDNYAEMVYNYTVSSLQNGEQQLD 293 Query: 404 MLREQTKNR-----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L + R + + ++ L +R+ C + +L+S + L Sbjct: 294 SLSTRLMARAPGAVLEHSCHSLESLDSRLHLSFEGMYGRCGQRFAAAAGMLESLSPLKVL 353 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 RGY+ D + L RI F DG+ ++V K Sbjct: 354 TRGYSITFDKSGKIARSAEQLKPGNRITTRFHDGEVVSVVAEKE 397 >gi|162450747|ref|YP_001613114.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So ce 56'] gi|161161329|emb|CAN92634.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So ce 56'] Length = 536 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 139/494 (28%), Positives = 214/494 (43%), Gaps = 56/494 (11%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTL 73 SV+EL LK I+E + + V V GEISG R + SGHAYF+LKD + ID ++++ Sbjct: 3 SVAELDRRLKRILEGSTADVRVEGEISGLRVV-GSGHAYFTLKDESEEAAIDCVMYRTAA 61 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + L +G ++ G+ T + + Q + +G G LL AL + K+KL EGLF Sbjct: 62 PRARKLLADGARVVLTGRATVYVPRGRLQFSADDARLAGRGALLEALFRLKEKLAAEGLF 121 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193 + + K +P P+II V+TS GA I DI+ R R+I+ VQG + I A Sbjct: 122 APERKRKLPVDPQIIGVVTSGDGAAIHDIVTVAFRRGGARLILARTPVQGAGAGQRIVRA 181 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I L P ++II+ RGGGS +DL FN+E++VR +A + +PI+SA+GHE D Sbjct: 182 IALL------EEFPGIEVIIVGRGGGSADDLSAFNEEIVVRKVAAARVPIVSAVGHEIDV 235 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L D AAD RA TP+ AAEM V +++L +LEAR+ I ++ L+ Sbjct: 236 ALTDLAADARAATPSQAAEMLVADAAARRAALEHLEARMRRAIAHRLRGARADLDRQRAR 295 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + Q L+ + R+D L +E I+ + R+ + + R + Sbjct: 296 LGSPAQILAEPQQRIDDAMARLRRRMERILVEDRAALQRLERRLAARHPRAVLAGARGAL 355 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + +H Sbjct: 356 RPLSVRLAAAAHRH---------------------------------------------- 369 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + + L++ + L RGY D + + R +A I + G Sbjct: 370 -VALLREGFAGDVARLEAMSPLRVLARGYAIATDGSGRAVRDHREVAPGDPIAVRVHHGA 428 Query: 494 ANAIVINKAPPKEQ 507 A V+ A P E Sbjct: 429 LLARVVVTAGPDEP 442 >gi|91773480|ref|YP_566172.1| exodeoxyribonuclease VII large subunit [Methanococcoides burtonii DSM 6242] gi|91712495|gb|ABE52422.1| Exodeoxyribonuclease VII, large subunit [Methanococcoides burtonii DSM 6242] Length = 407 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 137/360 (38%), Positives = 206/360 (57%), Gaps = 12/360 (3%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P Y+V+EL+ +K+ + +N L+ + V+GEIS HSSGH YF++KD S+I + +K Sbjct: 2 PAYTVTELNNLIKNTLTNNPKLNQIWVQGEISNLT-KHSSGHYYFTVKDGKSQISCVSFK 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + F E ++ LV G + + +YQ+ ++ + P G G L A E+ K KL +E Sbjct: 61 SVNRNLRFELESSMKVLVFGSVDVYVVRGQYQLYVQDIRPDGVGELYKAYEQLKNKLEQE 120 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEI 190 GLFSD HK PIP P I V+TSPTGA I DIL I R+P+ +++ P VQG+ + I Sbjct: 121 GLFSDVHKIPIPGYPLRIGVVTSPTGAAIHDILNVIRRRYPVNILLSPTIVQGERSAESI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +I LN D+II+ RGGGS+EDLW FN+E++ RAI NS PI+SA+GHE Sbjct: 181 VRSIELLNQ-------TDVDVIIVGRGGGSLEDLWSFNEEVVARAIFNSKKPIVSAVGHE 233 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ AD+RAPTP+ AAE+ VP ++ ++ L L +RL N + +I L + Sbjct: 234 TDFTIADFTADMRAPTPSAAAELVVPDQKEVKRHLATLSSRLENEVEHVISQGKGRLEQI 293 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 K L + L LD L +L ++ I K +++ + ++ I + Sbjct: 294 RKKLEPQHIMDMLLQDSQYLDELTMKLTSSMGKTIVDKTFELKFHSSKLNAVSPLNTILR 353 Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 51/139 (36%), Gaps = 3/139 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++H+ +E V+ + ++ L + + + ++ +L ++ Sbjct: 265 KRHLATLSSRLENEVEHVISQGKGRLEQIRKKLEP--QHIMDMLLQDSQYLDELTMKLTS 322 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILIN 488 + I + + L + + NT+ RGY+ D N+ I+ L ++ + Sbjct: 323 SMGKTIVDKTFELKFHSSKLNAVSPLNTILRGYSIAIDPVNDLSISSVTELGDNDQLDVI 382 Query: 489 FFDGQANAIVINKAPPKEQ 507 DG + N +++ Sbjct: 383 VNDGIFECKIENIIHSRKK 401 >gi|55823137|ref|YP_141578.1| exodeoxyribonuclease VII large subunit [Streptococcus thermophilus CNRZ1066] gi|81820283|sp|Q5LZD9|EX7L_STRT1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|55739122|gb|AAV62763.1| exodeoxyribonuclease VII, large subunit [Streptococcus thermophilus CNRZ1066] Length = 446 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 155/494 (31%), Positives = 230/494 (46%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+ L+ +LK + + L V + G++S YR S H YFSLKD + I A IW G Sbjct: 5 LSVTSLTKYLKMKFDRDPYLERVYLTGQVSNYRRRPS--HQYFSLKDEGAVIQATIWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 KI F EEG++ V+G++ + S Y +IIE P G G L E+ +KKL EG Sbjct: 63 FKKIGFDLEEGMKINVVGRVQIYEPSGSYSLIIEKAEPDGIGALALQFEQLRKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK P+P K I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +EI Sbjct: 123 FDDRHKQPLPNFVKKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEIV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V++I S +P+IS++GHET Sbjct: 183 ENIQKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQSIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVP-VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P K + + + R +R I+Y L L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPISKADTLAWIRERQNRAYQACLRRIQYNQERLAKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LD L LE + RK + + R+ L ++ Sbjct: 297 SQSVVFRQPERLYDGYLQKLDHLTTRLETFMSQDFERKQKSAEFLRQRLHGLNLSTRVKN 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + Q+ + Sbjct: 357 YQDRRESLQRL-----------------------------------------------LV 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + I + L S + RGY + + N+ +T +++ ++ I Sbjct: 370 TTTKNTINGNRVRLEKAQDALLSLDTSRIVARGYAIV-NKNDKPLTTIKDITEGEQLTIQ 428 Query: 489 FFDGQANAIVINKA 502 DGQ V N Sbjct: 429 MRDGQLEVEVKNVN 442 >gi|171778675|ref|ZP_02919771.1| hypothetical protein STRINF_00623 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282632|gb|EDT48056.1| hypothetical protein STRINF_00623 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 442 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 144/492 (29%), Positives = 223/492 (45%), Gaps = 62/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD ++ I A +W GT Sbjct: 5 LSVSTLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQATMWAGT 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ KKKL E G Sbjct: 63 FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALALQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FDERHKRQLPRFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLADY AD RA TPT AAE+A PV + S I + L Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERDNRIYQAALRRIKQSQERLDKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LDRL L + ++ + + + R+ + I+ Sbjct: 297 ANSVIFRQPERLYDGYVQKLDRLVMSLINTMQNQFSQAKQRQELLHQRLLALDFDSQIKH 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++ ++ + + Sbjct: 357 YKDNLQSLRRLLLSNMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY +Q ++ I+ ++ ++ + Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KDDKVISSVTDVNLGDKLTVQ 428 Query: 489 FFDGQANAIVIN 500 DGQ V + Sbjct: 429 LKDGQLEVEVKD 440 >gi|306833001|ref|ZP_07466133.1| exodeoxyribonuclease VII large subunit [Streptococcus bovis ATCC 700338] gi|304424900|gb|EFM28034.1| exodeoxyribonuclease VII large subunit [Streptococcus bovis ATCC 700338] Length = 442 Score = 307 bits (787), Expect = 2e-81, Method: Composition-based stats. Identities = 147/492 (29%), Positives = 228/492 (46%), Gaps = 62/492 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD ++ I + +W GT Sbjct: 5 LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPT--HQYFSLKDENAVIQSTMWAGT 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y IIIE P G G L E+ KKKL E G Sbjct: 63 FKKLGFELEEGMKINVVGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FDERHKRQLPQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGASQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIAKANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLADY AD RA TPT AAE+A PV + S I + + L Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADIISWIAERQNRAYQASLRMIKQKQERLDKL 296 Query: 312 K---ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LDRL +L + ++ + + + R+ + L +I++ Sbjct: 297 AKSVIFRQPERLYDGYVQKLDRLTTQLMNTMQTQFNQASQRQQLLNQRLLAVDLGSDIRR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + Q+ + + Sbjct: 357 YQERLEAFQRLLISNMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY +Q N I+ ++A ++ + Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMVQ-KNEEIISSVTDVAVGDQLTVR 428 Query: 489 FFDGQANAIVIN 500 DGQ V + Sbjct: 429 LRDGQLEVEVKD 440 >gi|154498047|ref|ZP_02036425.1| hypothetical protein BACCAP_02028 [Bacteroides capillosus ATCC 29799] gi|150273037|gb|EDN00194.1| hypothetical protein BACCAP_02028 [Bacteroides capillosus ATCC 29799] Length = 399 Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats. Identities = 138/363 (38%), Positives = 209/363 (57%), Gaps = 12/363 (3%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + YSVS+++ ++K +++ + LS + +RGEIS Y+ SGH YFS+KD I ++ Sbjct: 3 NDTVYSVSQVNQYIKDLLDGDGALSGIYIRGEISNYKMYP-SGHHYFSMKDEGGAIRCVM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ + + F PE G++ + G++T FP +YQ+ + +L P G G L A E+ K KL Sbjct: 62 FRREASALRFRPENGMKVVAFGRVTVFPRDGQYQLYVSALTPDGVGDLYVAFEQLKAKLY 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 EGLF HK PIP P+ IA++TS GA +RD+L+ + R+P+ +V + PV+VQG E P Sbjct: 122 AEGLFDPAHKKPIPRFPRRIALVTSAAGAAVRDMLRILGARWPMAQVAVVPVRVQGAEAP 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 EIA A+ +N L D+II RGGGS+EDLW FN+E++ RAI S +P+ISA+ Sbjct: 182 GEIAAALGWVNRLGWA------DLIITGRGGGSMEDLWAFNEEIVARAIYASQVPVISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKIN 305 GHE D T+AD+ ADLRA TP+ AAE+AVP + + L L AR+ + R Sbjct: 236 GHEPDVTIADFVADLRAATPSNAAELAVPDQNDVAGRLNQLSARMEQAMSRRLGEFSSKL 295 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S +AL N + R LD L H L + R+ +HF + + + + Sbjct: 296 ERLSGSRALQNPMNYIEDRRVLLDYQRTRLAHGLSGTLNRERQHFARLAASLDAMSPLKV 355 Query: 366 IQK 368 + + Sbjct: 356 LAR 358 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 2/133 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRI 427 + + + + ++Q + E K+ L + N I + TR+ Sbjct: 266 QNDVAGRLNQLSARMEQAMSRRLGEFSSKLERLSGSRALQNPMNYIEDRRVLLDYQRTRL 325 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 LS + + L + + L RGY + + + K ++A + + Sbjct: 326 AHGLSGTLNRERQHFARLAASLDAMSPLKVLARGYAIPRLEDGTVVRSKTDVAAGDALRL 385 Query: 488 NFFDGQANAIVIN 500 DG+ IV Sbjct: 386 RVADGEIPCIVKE 398 >gi|158320643|ref|YP_001513150.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus oremlandii OhILAs] gi|166919630|sp|A8MFJ1|EX7L_ALKOO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158140842|gb|ABW19154.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus oremlandii OhILAs] Length = 408 Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats. Identities = 136/359 (37%), Positives = 217/359 (60%), Gaps = 12/359 (3%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SVSE++ ++K I+ + LSH+ V+GEIS YR +HSSGH YF+LKD +S+I + Sbjct: 1 MQIKALSVSEVNQYMKRILGSDPILSHIYVKGEISNYR-LHSSGHMYFTLKDKNSKISCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K++F PEEG+ + G ++ + + Q+ + + PSG G L A ++ K +L Sbjct: 60 MFKGNCEKLKFFPEEGMSLVCKGYVSIYEKDGQVQLYVNDMEPSGIGALHLAFQQLKDRL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF ++K IP IP+ IA+ITSPTGA IRD++ I RFP + + IFPV VQG+ Sbjct: 120 NKEGLFDTKYKQEIPLIPRRIALITSPTGAAIRDMVSIILRRFPQVELCIFPVLVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I AI N P D+ I+ RGGGSIE+LW FN+E + RAI NS +PIISA Sbjct: 180 VETIVKAIELCNR------YPGIDLAIVGRGGGSIEELWAFNEEKVARAIFNSRVPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T++D+ ADLRA TP+ AAE+AVP + L+ + ++E R+ +++ + Sbjct: 234 VGHETDFTISDFVADLRAATPSSAAELAVPNRVELREYIDSMEKRMIHLMKTKLNTSYQK 293 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ + + + ++ L ++++ + + +RH ++ R+ S + Sbjct: 294 LSFIENSYFFRYPLNPIYDKQQYINDLLQKIKSAINVKKQFNHRHLKYLGERLHSLSPL 352 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 2/131 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R++I ++ + ++K + +K N I+ +I L+ +I+ Sbjct: 269 REYIDSMEKRMIHLMKT--KLNTSYQKLSFIENSYFFRYPLNPIYDKQQYINDLLQKIKS 326 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 ++ K + H + L S + + RGY+ ++++ + + ++ R+ I+ Sbjct: 327 AINVKKQFNHRHLKYLGERLHSLSPLSIFSRGYSIVRNSEGSIVKSTDHVQVDERLCIDV 386 Query: 490 FDGQANAIVIN 500 DG+ N VI Sbjct: 387 IDGEINCKVIE 397 >gi|268324170|emb|CBH37758.1| probable exonuclease VII, large subunit [uncultured archaeon] Length = 444 Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats. Identities = 132/363 (36%), Positives = 213/363 (58%), Gaps = 8/363 (2%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 YSV E++ +++ ++ + LS V V+GE+S +SGH YF+LKD S + ++ Sbjct: 37 TQHIYSVQEVTSYIRRRLDEDSMLSDVYVKGELSNL-SQPTSGHLYFTLKDKFSELRCVM 95 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F PE+G+ ++ G I+ + YQ+ ++ L G G L A E+ KKKL Sbjct: 96 FRDKNRGLKFTPEDGMSVILRGHISVYERRGSYQLYVDELQAEGIGALYLAFEQLKKKLK 155 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF ++K PIP P+ I +ITSPTGA IRD+L RFP + +++ PV VQG++ P Sbjct: 156 GEGLFDSKYKKPIPSFPRKIGIITSPTGAAIRDMLNITKRRFPHVYILVAPVAVQGEDAP 215 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 ++I NAI +N + E R + D+++L RGGGSIE+LW FN+E + R I S IP+ISA+ Sbjct: 216 RQIVNAIRLMNRVNEER--MKIDVLVLGRGGGSIEELWAFNEEDVAREIFASKIPVISAV 273 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+ AD RA TP+ AAE+AVP K ++ +L +LE R+ I I+Y L Sbjct: 274 GHETDFTIADFVADRRAATPSEAAELAVPDKREIERNLSSLELRMQQNIYNTIEYHRKRL 333 Query: 308 NSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S+ K + + ++ R +D L R + ++ + + ++ + + Sbjct: 334 ESIEKNILFRKPTERINQHRQTVDELKRTIFAASTHLVTLHRKSLQALTGKLDALSPLAI 393 Query: 366 IQK 368 + + Sbjct: 394 LDR 396 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 3/140 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427 ++ I +E ++Q++ ++++ + ++L + RI + +L I Sbjct: 304 KREIERNLSSLELRMQQNIYNTIEYHRKRLESIEKNILFRKPTERINQHRQTVDELKRTI 363 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRIL 486 +H + S+ T L + + L RGY+ + + I +++ + Sbjct: 364 FAASTHLVTLHRKSLQALTGKLDALSPLAILDRGYSICSRLPDGKIIRTVEDISVGDVLT 423 Query: 487 INFFDGQANAIVINKAPPKE 506 I F DG+A + V K K+ Sbjct: 424 ILFTDGEATSEVKEKWTKKK 443 >gi|221194559|ref|ZP_03567616.1| exodeoxyribonuclease VII, large subunit [Atopobium rimae ATCC 49626] gi|221185463|gb|EEE17853.1| exodeoxyribonuclease VII, large subunit [Atopobium rimae ATCC 49626] Length = 459 Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats. Identities = 128/513 (24%), Positives = 206/513 (40%), Gaps = 64/513 (12%) Query: 1 MNPFSQKNSLDHP--------EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSG 51 M FS S D SVSE +K + + + + V GE+SG+RG SG Sbjct: 1 MWDFSDTPSEDMNFKEKEEKHVLSVSEAIIVIKENI-TRIPLLTVVGEVSGFRGPNARSG 59 Query: 52 HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 H YF +KD + + AI+WKG +G+ + G+ + GS K + SL + Sbjct: 60 HCYFDIKDASASMAAIVWKGIYLASGVTLHDGMRVQITGRYDVYKGSGKLSFVATSLTVA 119 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP 171 G G L + + KKL EGL + K PIP I V+TS +G+VI D+ + ++ R Sbjct: 120 GEGDLRQKVAELAKKLEREGLMREDRKRPIPRFCTRIGVVTSLSGSVIEDVKRTLARRNS 179 Query: 172 -LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 + + + VQG+ P+ I A+ + PD I+L RGGGS EDL FNDE Sbjct: 180 LVEIEVTGAAVQGEHAPQTIVQALGIAESTH-------PDAILLVRGGGSFEDLMCFNDE 232 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 + RAIA SS+P+I+ IGHE D T+AD +D R TPT AAE P LQ + + + Sbjct: 233 AVARAIAASSVPVITGIGHEPDVTIADMVSDRRTSTPTAAAESVAPSISELQMAFNDRVS 292 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 RL + L +D R + ++ + ++ F Sbjct: 293 RLAGAT---------------------EALLLGYAQEIDGFSRRADLAIQNSLRQRQIRF 331 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + R ++ + +L+ +Q + + Sbjct: 332 LALAERKCLSDPLYLFVSRKSDLLQTEQRLHDALPLA----------------------- 368 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 + + + R++ + + VS L++ + L RGY + Sbjct: 369 --LNRKEQALTQSADRLKTAATRLLAPYEAQVSAAAGKLEALSPLKVLGRGYALATNERG 426 Query: 471 NFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + I + +G A V Sbjct: 427 HVLKNAHDAQKGEAIRVKLAEGSLVAHVTEIEA 459 >gi|24215056|ref|NP_712537.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans serovar Lai str. 56601] gi|31563144|sp|Q8F3P5|EX7L_LEPIN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|24196108|gb|AAN49555.1| exodeoxyribonuclease VII large subunit [Leptospira interrogans serovar Lai str. 56601] Length = 422 Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats. Identities = 136/495 (27%), Positives = 212/495 (42%), Gaps = 79/495 (15%) Query: 11 DHPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 D SVSE++ +K+++ +L ++ VRGEIS Y SSGH YFSLKD S I Sbjct: 3 DSKPLSVSEVTRIIKNLISGSKDLKNIWVRGEISNY-SKASSGHIYFSLKDAGSLIRCTF 61 Query: 69 WKGTLNKIEFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 + + P +G E V G IT + Y + + + G G +L +EK K+KL Sbjct: 62 FNYSNKNYSGKPLSDGKEIQVYGTITLYEAGGSYNLNVTRVEELGQGDILLQIEKLKQKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EG+F + K IP PK + + TSPTGA I DI++ RFP + ++I P VQG++ Sbjct: 122 AVEGIFDPEKKRRIPSFPKTLGIATSPTGAAIEDIIKISRSRFPGINILIAPCIVQGEDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P I AI +LN + D+II RGGGS EDL FNDE +VRA ANS +PIISA Sbjct: 182 PDSIVAAIEELN-----HPNWKVDVIIAGRGGGSFEDLMAFNDEKVVRAYANSRVPIISA 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GH+TD L+D+AAD PTPT AAE A+P +E + Sbjct: 237 VGHQTDVLLSDFAADHFTPTPTAAAEYAIPKEEDVL------------------------ 272 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L +L ++ +L I + + + + Sbjct: 273 -------------------QFLSQLEGRIKSSLVTKISSNRDRLRLLSGKFIFKEPMQLL 313 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q + E +++ + N++ +++ Sbjct: 314 NQRSQRVDEIGIRLQKAL-------------------------SNKLNLARVRLERY-QN 347 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + + T ++ + T+KRGY+ +++ N I + + Sbjct: 348 LTSRIQNILFHKKQKAEFWTSKVEDLSPAATMKRGYSILRNENGKIIRSPEETKPEEELQ 407 Query: 487 INFFDGQANAIVINK 501 + G I K Sbjct: 408 VLLSGGTMQVIRKGK 422 >gi|322389032|ref|ZP_08062600.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis ATCC 903] gi|321144255|gb|EFX39665.1| exodeoxyribonuclease VII large subunit [Streptococcus parasanguinis ATCC 903] Length = 463 Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats. Identities = 143/500 (28%), Positives = 228/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A +W Sbjct: 19 SNYLSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVW 76 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL E Sbjct: 77 AGVYRSFGFELEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLTE 136 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P P+ I VITS +GAVIRDI+ +S RFP + ++++P KVQG+ Sbjct: 137 EGLFQDRWKQALPQFPRKIGVITSQSGAVIRDIITTVSRRFPGVEIVLYPTKVQGEGASS 196 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+ I + N D++I+ RGGGSIEDLW FN+E +VRAI S IPIIS++G Sbjct: 197 EVVANIQRANQR------DDLDVLIIGRGGGSIEDLWAFNEEPVVRAIFESRIPIISSVG 250 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR-LNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + S + + + + + Y L Sbjct: 251 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLSHLQKQENRMATAMSNRLAYNRERL 310 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ++ ++D+L L+ + + + + +R+++ +H Sbjct: 311 AKLSQSVIFRQPERLYDGYLQKIDQLQLRLKQGMREVYGQGDNQLQGLRHRLEAMSPLHR 370 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I++ + + + ++ + Sbjct: 371 IERYQDRVFQDRRLL--------------------------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +K V + L + RGY ++ ++ + + + Sbjct: 386 --TSRMEQVLKEQKIKVQGLSEALLMLDTSRIIARGYAMVK-QDDQVLDSVAKVKEGDPL 442 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 443 SLIMRDGQLEVEVKHVERKE 462 >gi|218282377|ref|ZP_03488659.1| hypothetical protein EUBIFOR_01241 [Eubacterium biforme DSM 3989] gi|218216663|gb|EEC90201.1| hypothetical protein EUBIFOR_01241 [Eubacterium biforme DSM 3989] Length = 443 Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats. Identities = 111/490 (22%), Positives = 212/490 (43%), Gaps = 63/490 (12%) Query: 16 SVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 S+S + +K+I+ +L + ++GEIS H SGH YFSLKD + +++ + Sbjct: 8 SISSVIARIKNILTQTMDLDGIWIQGEISNLT-KHRSGHYYFSLKDKSGEMSCVMFSSYV 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++ F +EG+ LV G I + Q++I + G G L EKRK+ LL+ G F Sbjct: 67 SRLNFNVQEGMRVLVSGSINVYEQRGSLQLVIRQMKQDGLGDLYLEFEKRKQDLLKAGYF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 HK P + I VIT A ++D+L I R+P ++V ++P VQG+ PK + Sbjct: 127 DANHKKAKPEYIENIGVITGAGTAALQDVLSTIQKRWPMMKVTLYPSLVQGNFAPKSLIQ 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 ++ + +T D +++ RGGGS EDL+ FND +++ I N + I+S +GHE D Sbjct: 187 SLKKADTFGH-------DALLIVRGGGSFEDLFCFNDVELIKTIYNLNTYIVSGVGHEVD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL D D R+ TPT AA+ + + + + + L + ++ + L Sbjct: 240 TTLCDLVCDHRSVTPTAAAQWVTFDQYDVMNKIAKDKELLYRNMSLILNGYKSKLEQYKS 299 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + + + +LD ++EH L + + + Sbjct: 300 HPYLKDPKAFIVDKQLKLDAYHTQMEHALSLELQK------------------------- 334 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I K + + + + +K ++ + ++ Sbjct: 335 -----------------MNLIKNYKHQLAFNMSQILKDSKQKLSIIPEKLEV-------S 370 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +KI+ + +L +++ L RGY+ + + + R++ + ++ Sbjct: 371 MQNKIQEKRHLLMRDCALLDAYSPLKVLSRGYSISKVED-KVVKSIRDVKSDDIMITRVH 429 Query: 491 DGQANAIVIN 500 DG + + + Sbjct: 430 DGVITSRIAS 439 >gi|332522245|ref|ZP_08398497.1| exodeoxyribonuclease VII, large subunit [Streptococcus porcinus str. Jelinkova 176] gi|332313509|gb|EGJ26494.1| exodeoxyribonuclease VII, large subunit [Streptococcus porcinus str. Jelinkova 176] Length = 447 Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats. Identities = 143/494 (28%), Positives = 233/494 (47%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS+L+ +LK + + L V + G++S +R + H YFSLKD + I A IW G Sbjct: 5 LSVSQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATIWGGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ ++G++ + S Y IIIE + P G G L E+ K KL +EG Sbjct: 63 YKKLGFDLEEGMKVNIVGRVQLYEPSGSYSIIIEKVEPDGIGALALQFEQLKAKLSKEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+D HK +P K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG +E+ Sbjct: 123 FNDNHKQALPQFAKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLFPTKVQGSGAAEEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N + D++I+ RGGGSIEDLW FN+E++V+AI S +PIIS++GHET Sbjct: 183 TNIALANQRTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A PV + S I+ + + + + L Sbjct: 237 DITLADFVADRRAATPTAAAELATPVTKADIISWISEQQNRAYQANLRLFKQKEDRLAKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++D+L ++ + ++ + R + +R++S ++ + + Sbjct: 297 SQSVIFRQPERLYDSFLQKIDQLQSQMNYQIKQKLSETQRLEVSLRHRLQSLDILAKLSR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + Q ++ +++ Y Sbjct: 357 YQEKVNYLDQWLQINMQKRYDYSL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + + + RGY ++ + I+ N+A + + Sbjct: 381 -----------ARFEKAQDTLLALDTERIIARGYGILR-KDEEVISSVANIAIGDALDLE 428 Query: 489 FFDGQANAIVINKA 502 DGQ V N Sbjct: 429 LQDGQIEVEVKNVK 442 >gi|50914599|ref|YP_060571.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS10394] gi|306827050|ref|ZP_07460348.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes ATCC 10782] gi|50903673|gb|AAT87388.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS10394] gi|304430796|gb|EFM33807.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes ATCC 10782] Length = 451 Score = 306 bits (784), Expect = 6e-81, Method: Composition-based stats. Identities = 141/494 (28%), Positives = 224/494 (45%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 10 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 68 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 362 YQDRVATAKRLLMANM-------------------------------------------- 377 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + S L S + RGY I+ N + + ++ I Sbjct: 378 ---ARQYDSQLARFEKAQDALLSLDVSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 434 MRDGQLDVEVKDVK 447 >gi|225174883|ref|ZP_03728880.1| exodeoxyribonuclease VII, large subunit [Dethiobacter alkaliphilus AHT 1] gi|225169523|gb|EEG78320.1| exodeoxyribonuclease VII, large subunit [Dethiobacter alkaliphilus AHT 1] Length = 407 Score = 306 bits (783), Expect = 7e-81, Method: Composition-based stats. Identities = 127/390 (32%), Positives = 222/390 (56%), Gaps = 12/390 (3%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +V++L+ ++K++ +S L+ + V GEIS ++ HSSGH YF+LKD + + ++++ Sbjct: 8 PVTVAQLTQYIKNLFAADSQLNSLRVSGEISNFKH-HSSGHMYFTLKDAKASLRCVMFRS 66 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F P +G+ +V G+I+ + +YQ+ +E+++P G G+L A E KK+L EG Sbjct: 67 YNARLTFKPTQGMNVVVSGRISVYERDGQYQMYVENMLPEGVGSLFAAFEALKKRLAAEG 126 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ + K +P +P I V+TSPTGA IRDIL + RFP V++ PV VQG + P++I Sbjct: 127 LFAPEKKKQLPKLPTRIGVVTSPTGAAIRDILTTLKRRFPQAEVLVMPVLVQGPDAPEQI 186 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI LN D++I+ RGGG+IE+LW FN+E++ RA+ S IP++SA+GHE Sbjct: 187 AEAIEFLN------NIDDVDVMIIGRGGGAIEELWAFNEEVVARAVYASDIPVVSAVGHE 240 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS- 309 TD+T+AD+ AD+RA TPT AAE+ VP + + L + + R+ + +++ L Sbjct: 241 TDFTIADFVADVRAATPTAAAEIVVPDQREIMQYLDSAKQRMAAKLAAKLEHDRRYLERL 300 Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + L LD L LE ++ ++ + + ++ + + + Sbjct: 301 ASSRVLTRPLERLEQYSQVLDNLSARLETRMQYLLQGCQSRVSVLEGKLTALSPEAVLAR 360 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L+++ ++ + R L+ + + Sbjct: 361 GFAICLDEKGNVVRDAALLNRDDLLKLRLQ 390 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 50/141 (35%), Gaps = 2/141 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ Q++ +Q + + L + + + + + R+ + L R Sbjct: 269 REIMQYLDSAKQRMAAKLAAKLEHDRRYLERLASS--RVLTRPLERLEQYSQVLDNLSAR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 +E + + ++ C + VS+ L + + + L RG+ D N + L + Sbjct: 327 LETRMQYLLQGCQSRVSVLEGKLTALSPEAVLARGFAICLDEKGNVVRDAALLNRDDLLK 386 Query: 487 INFFDGQANAIVINKAPPKEQ 507 + G A V + + Sbjct: 387 LRLQRGTVTARVEETDTEEVK 407 >gi|294054639|ref|YP_003548297.1| exodeoxyribonuclease VII, large subunit [Coraliomargarita akajimensis DSM 45221] gi|293613972|gb|ADE54127.1| exodeoxyribonuclease VII, large subunit [Coraliomargarita akajimensis DSM 45221] Length = 451 Score = 306 bits (783), Expect = 7e-81, Method: Composition-based stats. Identities = 143/490 (29%), Positives = 215/490 (43%), Gaps = 56/490 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 V++L+ +K +E VRGE+S R SSGH YFSLKD+ S++ ++ Sbjct: 8 PEPSEVLKVTDLTRQIKRQLEGRFRQFWVRGEVSNLR-KQSSGHVYFSLKDSGSQLPCVL 66 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + + F EG+E ++ G ++ + +YQ I + I SG G L E+ K+KL Sbjct: 67 FARDAARQSFELREGMELVLFGDVSVYEPHGRYQFIAKIAIESGEGQLQLEFERLKRKLA 126 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187 EGLF K P+P +P IAVITSPTGA +RD L+ + R + V+I P +VQG+ P Sbjct: 127 GEGLFDRGTKRPLPLLPLRIAVITSPTGAAVRDFLRILKRRHYHGTVVILPARVQGEAAP 186 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 A L+ + P D+I+L RGGGSIEDLW FN E + R IA IP+ISA+ Sbjct: 187 -----AELRQMLQVASASQPAFDLIVLTRGGGSIEDLWAFNHEQLARDIATCPIPVISAV 241 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D L DY AD RA TP+GAAE + + +E L + R ++ L Sbjct: 242 GHEIDHVLTDYVADERAETPSGAAERISSIYLDCVQRVEAIEYSLTDSTTRSLEIVEREL 301 Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 +L L + + +LD + +L + R+ ++ ++ Sbjct: 302 INLDARLQIIAPARQIQLRSMQLDDQAHRMSTSLRQRLSREKDQLANLGRQLAQHHPATR 361 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + RQ + Q + Q V + I L Sbjct: 362 TELARQQLKNLQHRLRQGVGTP-------------------------LARKSDRISHLAK 396 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+E + TLKRGY+ I + + + I + L + Sbjct: 397 RLENG----------------------NLQATLKRGYSLISNKDGDIIDSRAKLPDNEAV 434 Query: 486 LINFFDGQAN 495 + F DG+A Sbjct: 435 TVRFHDGKAK 444 >gi|312864856|ref|ZP_07725087.1| exodeoxyribonuclease VII, large subunit [Streptococcus downei F0415] gi|311099983|gb|EFQ58196.1| exodeoxyribonuclease VII, large subunit [Streptococcus downei F0415] Length = 447 Score = 306 bits (783), Expect = 7e-81, Method: Composition-based stats. Identities = 151/497 (30%), Positives = 234/497 (47%), Gaps = 62/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A IW G Sbjct: 5 LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATIWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + + Y IIIE P G G L E+ KKKL + G Sbjct: 63 FRKLGFELEEGMKINVVGRVQLYEPNGSYSIIIERAEPDGIGALAVQFEQLKKKLTQAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+ +HK +P K I V+TS +GAVIRDI+ +S RFP + +++FP KVQG+ + +A Sbjct: 123 FAAEHKQALPQFVKKIGVVTSSSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGSAQAVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I Q N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ENIAQANQRED------LDLLIIGRGGGSIEDLWAFNEEVVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLADY AD RA TPT AAE+A PV K + + L R R I + L Sbjct: 237 DTTLADYVADRRAATPTAAAELATPVTKADILAWLREAGQRAYQATNRRIGQEGERLAKW 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LDRL +L + + + + + R+ S L +Q Sbjct: 297 SQSVIFRQPERLYDGHAQKLDRLTDDLSKQMRYRLSQAQQDQGLLSQRLASIDLQGRLQL 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + ++++ ++ + Sbjct: 357 VKERLSQQERLLKANM-------------------------------------------- 372 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +++ S L S + RGY +Q + IT +L ++ + Sbjct: 373 ---ANQYDSRLARFEKAQDALLSLDTSRIVARGYAIVQ-KDKKPITSVTDLKQGDQLTLQ 428 Query: 489 FFDGQANAIVINKAPPK 505 DGQ V N K Sbjct: 429 MKDGQVEVEVENAKQEK 445 >gi|322412222|gb|EFY03130.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 446 Score = 305 bits (782), Expect = 8e-81, Method: Composition-based stats. Identities = 139/494 (28%), Positives = 220/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 63 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK +P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 123 FEQKHKQSLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIMVQAIFESKLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTELMSWIVERQNRSYQACLRQIKQRQEWVDKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 357 YQDRVATAKRLLMANMTNQYDSQL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 381 -----------ARFEKAQDALLSLDTGRIIARGYALIE-KNQELVASVSQITKGDQLTIK 428 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 429 MRDGQLDVEVKDVK 442 >gi|323127696|gb|ADX24993.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 446 Score = 305 bits (782), Expect = 9e-81, Method: Composition-based stats. Identities = 138/494 (27%), Positives = 220/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 63 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK +P I VITSP+GAVIRD + +S RFP + +++FP KVQGD +E+ Sbjct: 123 FEQKHKQLLPQFVSKIGVITSPSGAVIRDFITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESKLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + + L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVAKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 357 YQDRVATAKRLLMANMTNQYDSQL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 381 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 429 MRDGQLDVEVKDVK 442 >gi|83319530|ref|YP_424053.1| exodeoxyribonuclease VII, large subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283416|gb|ABC01348.1| exodeoxyribonuclease VII, large subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 468 Score = 305 bits (782), Expect = 9e-81, Method: Composition-based stats. Identities = 127/494 (25%), Positives = 222/494 (44%), Gaps = 37/494 (7%) Query: 14 EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SV EL+ LK +E ++ V+GE+S SGH YFS+KD ++ I+ ++WK Sbjct: 4 ILSVQELNESLKTFIEEPDYFKNIYVKGELSNLTFN-KSGHVYFSIKDQNAAINCMMWKS 62 Query: 72 TLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 K+ E+G++ + G++T + + + + + G G L E+R K L + Sbjct: 63 NTQKLASLNLEDGMQIICHGRLTYYIPTGRVSFEAKDIQIYGIGDLQKIYEQRYKDLKQA 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G F K P+P K + +IT+ +GA I D++ I R P + + +FP +VQG + + Sbjct: 123 GWFDQNLKKPLPEFIKNVGIITASSGAAIHDLITTIHRRLPLINIYLFPAQVQGAQSEID 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IAN I Q N K + D++I+ RGGGS EDLW FN+ ++++AI +S IPIISA+GH Sbjct: 183 IANKIKQANDFKI-----KLDVLIVGRGGGSYEDLWAFNELVLLQAIKDSKIPIISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-LN 308 E D L+D+ AD+RA TPT A E+ +++ L + +I +K N Sbjct: 238 EPDVVLSDFVADIRAATPTAAGELVSKDINEIKNKLKHYYQTNKTLISNKLKLTNQELTN 297 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + LS L +L + ++ I + + I Sbjct: 298 FKENQIKFINNYLSNQYLELKQLSAYNPNLVKNKINSLIDKLDDNKHFIF---------- 347 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + I L+ KE ++ +++ + + T I+ + Sbjct: 348 ----------------ESIKKIIILQNKEINNHSNINKQKISDFLKKQITDFNFAISSFK 391 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++S KIK S + + + L+ G++ I + NN IT + + + + Sbjct: 392 GLISQKIKFEELSFASLEKQVGLLNPLKPLENGFSIITNLNNKKITSYKQVKINEDLKVF 451 Query: 489 FFDGQANAIVINKA 502 D + + Sbjct: 452 LSDSKLVVTIKEVK 465 >gi|259046626|ref|ZP_05737027.1| exodeoxyribonuclease VII, large subunit [Granulicatella adiacens ATCC 49175] gi|259036791|gb|EEW38046.1| exodeoxyribonuclease VII, large subunit [Granulicatella adiacens ATCC 49175] Length = 444 Score = 305 bits (782), Expect = 1e-80, Method: Composition-based stats. Identities = 152/501 (30%), Positives = 238/501 (47%), Gaps = 63/501 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +VS L+ ++K + + L V + GEIS + +S H YF+LKD ++ I A Sbjct: 1 MEQEYLTVSALTKYIKTKFDRDPHLDRVYLTGEISNFNK--NSVHKYFNLKDENAIIAAT 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++G KI+F PEEG++ LVIG++T + S KYQ+IIE + P G G L A E+ KKKL Sbjct: 59 MFQGAYKKIQFQPEEGMKVLVIGRVTVYEKSGKYQMIIEHMEPDGVGALYQAYEQLKKKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EEG+FS K PIP PK IA++TS TGAVIRDI ++ RFP+ +++++P VQG Sbjct: 119 TEEGVFSGPKK-PIPVFPKKIAILTSDTGAVIRDIQTTVARRFPIAQLVLYPTVVQGVHA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I + + D++I+ RGGGSIEDLW FN+E +VR +A+ S+PIIS+ Sbjct: 178 VPSILKNLDLV-------EQSDADVVIIGRGGGSIEDLWAFNEEPVVRRVASFSLPIISS 230 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D+AAD RA TPT AAE+A PV + +L NL RL ++ + + Sbjct: 231 VGHETDTTLTDFAADQRAATPTAAAELATPVLNDIHLTLGNLTGRLQTTMLNQLNTRKEL 290 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ L K ++ ++D+L +L ++ + + +R++ Sbjct: 291 LSKLEKSGIFVKPERMYEVYAQQVDQLRLKLMQGMQQRLHLAKQQSMQFTHRLQLLSPEQ 350 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + +Q + Q+ + + +++ Sbjct: 351 LLIQQKQKLEWLQKQL--------------------------------LDSNQNYLQDKQ 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R L + + RGY + + + Sbjct: 379 IRFHQ---------------LVEKLDLLSPLKIMTRGYGIVF-KKGTIVNSVEQIENNEE 422 Query: 485 ILINFFDGQANAIVINKAPPK 505 I I DG NA V K Sbjct: 423 IEIRLSDGLVNATVNEKNKES 443 >gi|19746454|ref|NP_607590.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS8232] gi|139473475|ref|YP_001128191.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes str. Manfredo] gi|23814088|sp|Q8P075|EX7L_STRP8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|73919347|sp|Q5XB25|EX7L_STRP6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158512777|sp|A2RDN0|EX7L_STRPG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|19748656|gb|AAL98089.1| putative exodeoxyribonuclease VII (large subunit) [Streptococcus pyogenes MGAS8232] gi|134271722|emb|CAM29955.1| putative exodeoxyribonuclease VII large subunit [Streptococcus pyogenes str. Manfredo] Length = 446 Score = 305 bits (782), Expect = 1e-80, Method: Composition-based stats. Identities = 141/494 (28%), Positives = 224/494 (45%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 63 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 123 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 357 YQDRVATAKRLLMANM-------------------------------------------- 372 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + S L S + RGY I+ N + + ++ I Sbjct: 373 ---ARQYDSQLARFEKAQDALLSLDVSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 429 MRDGQLDVEVKDVK 442 >gi|91776215|ref|YP_545971.1| exodeoxyribonuclease VII large subunit [Methylobacillus flagellatus KT] gi|91710202|gb|ABE50130.1| Exodeoxyribonuclease VII large subunit [Methylobacillus flagellatus KT] Length = 398 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 126/370 (34%), Positives = 202/370 (54%), Gaps = 8/370 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ + ++E++ + GEIS +SGH YFSLKD +++ ++++ Sbjct: 7 ILSVSELNRMARELLETSFPLFWISGEISNLT-RAASGHWYFSLKDQGAQVRCVMFRSRN 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++ P EG + +T + +Q+ IE L +G G L A EK K +L EGLF Sbjct: 66 AYLDWSPREGDKVEARAVVTLYEARGDFQLTIEFLQRAGLGNLFEAYEKLKNQLAAEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + +HK IP P+ I ++TSP A +RD+L + R P + VII+P VQG K IA+ Sbjct: 126 AAEHKIAIPAHPRQIGIVTSPDAAALRDVLTTLRRRMPAVNVIIYPTPVQGKGAAKLIAD 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGSIEDLW FN+E++ RAI ++P+ISA+GHETD Sbjct: 186 AIRTADQRAE------CDVLIVCRGGGSIEDLWQFNEEIVARAIHVCTLPVISAVGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ AD+RAPTPT AAE+ P + L ++L+ RL + L++ + L+ L + Sbjct: 240 FTIADFVADVRAPTPTAAAELTTPDRSSLLNTLLQHRNRLARSMQNLLQQRSQHLDYLSR 299 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + Q R L +L L + + R+++H + + +Q+ Sbjct: 300 RLLSPMQQAEHKRQHLSQLRLRLTQAMARQLQRQHQHLQAVQQSLAHLNPRAVLQRGYAL 359 Query: 373 ILEKQQHIEQ 382 + + + Q Sbjct: 360 VEKLNGELVQ 369 Score = 93.3 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 51/134 (38%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R +L + + ++ + ++ + + L + + H+ +L R+ Sbjct: 265 RSSLLNTLLQHRNRLARSMQNLLQQRSQHLDYLSRRLLSPMQQAEHKRQHLSQLRLRLTQ 324 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 ++ +++ H + + L + L+RGY ++ N + LA ++ + Sbjct: 325 AMARQLQRQHQHLQAVQQSLAHLNPRAVLQRGYALVEKLNGELVQDSNQLAPGDQVKLTL 384 Query: 490 FDGQANAIVINKAP 503 G A A + +K Sbjct: 385 SKGSAQAEIRDKGT 398 >gi|56808398|ref|ZP_00366150.1| COG1570: Exonuclease VII, large subunit [Streptococcus pyogenes M49 591] gi|94988857|ref|YP_596958.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS9429] gi|94992748|ref|YP_600847.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS2096] gi|94542365|gb|ABF32414.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS9429] gi|94546256|gb|ABF36303.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS2096] Length = 451 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 10 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 68 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 386 -----------ARFEKAQDALLSLDTSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 434 MRDGQLDVEVKDVK 447 >gi|312867102|ref|ZP_07727312.1| exodeoxyribonuclease VII, large subunit [Streptococcus parasanguinis F0405] gi|311097231|gb|EFQ55465.1| exodeoxyribonuclease VII, large subunit [Streptococcus parasanguinis F0405] Length = 446 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 145/500 (29%), Positives = 227/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A +W Sbjct: 2 SNYLSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G F EEG++ VIG+I + S Y I+IE P G G L E+ KKKL E Sbjct: 60 AGVYRSFGFELEEGMKINVIGRIQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P P+ I VITS +GAVIRDI+ +S RFP + ++++P KVQG+ Sbjct: 120 EGLFQDRWKQALPQFPRKIGVITSQSGAVIRDIITTVSRRFPGVEIVLYPTKVQGEGAAS 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+ I + N D++I+ RGGGSIEDLW FN+E +VRAI S IPIIS++G Sbjct: 180 EVVANIQRANQR------DDMDVLIIGRGGGSIEDLWAFNEEAVVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR-LNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + S + + + + + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLSHLQKQENRMATAMSNRLAYNRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ++ ++D+L L+ + + + +R+++ +H Sbjct: 294 AKLSQSVIFRQPERLYDGYLQKIDQLQLRLKQGMRDAYGQGVNQLQGLRHRLEAMSPLHR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I++ + +L+ ++ + Sbjct: 354 IERYQDRLLQDKRILTNR------------------------------------------ 371 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +K V + L + RGY ++ + + + + Sbjct: 372 -----MEQVLKEQKIKVQGLSEALLMLDTSRIIARGYAMVK-EGDQVLDSVAKVTEGDPL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 SLIMRDGQLEVEVKHVERKE 445 >gi|83749053|ref|ZP_00946059.1| Exodeoxyribonuclease VII large subunit [Ralstonia solanacearum UW551] gi|83724243|gb|EAP71415.1| Exodeoxyribonuclease VII large subunit [Ralstonia solanacearum UW551] Length = 480 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 133/492 (27%), Positives = 214/492 (43%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ + ++E + + VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 41 VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 99 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 100 QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 159 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K P+P P I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 160 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 219 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + +N E D+IIL RGGGSIEDLW FN+E + RA+A S +PI++ +GHETD Sbjct: 220 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDLPIVAGVGHETD 273 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ D+ AD+RAPTPTGAAE+ P + + + L+ + R + + T++ L + Sbjct: 274 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLDRRAQTVDWLAR 333 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + R RL L L L + R + R+ + + + R Sbjct: 334 RLRSPQAQMRERRTRLAHLEGRLRFALHGRVQRAEHVQRLLAMRLAAARP--DTARERTA 391 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + ++ L + A L +L Sbjct: 392 LQGIEAALARAMRTTLDRAQTRLSHRQAGLELL------------------------APQ 427 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ GY + D + I L + RI G Sbjct: 428 RTLER-----------------------GYAVLLDADGRAIRDPNALHARARIEARLALG 464 Query: 493 QANAIVINKAPP 504 + + P Sbjct: 465 AVDIEIAQAQPK 476 >gi|294496440|ref|YP_003542933.1| exodeoxyribonuclease VII large subunit [Methanohalophilus mahii DSM 5219] gi|292667439|gb|ADE37288.1| exodeoxyribonuclease VII, large subunit [Methanohalophilus mahii DSM 5219] Length = 399 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 127/359 (35%), Positives = 202/359 (56%), Gaps = 12/359 (3%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V+ L+ ++K+++ E L H+ V GEIS H SGH YFS+KD S++ + ++ Sbjct: 3 IYTVTGLNKYIKNVLTSEMALQHIWVEGEISNLT-KHRSGHYYFSIKDGSSQLSCVSFRS 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 T K++F PE+ ++ LV G + + +YQ+ + + P G G L A E+ KK+L EG Sbjct: 62 TNRKLKFEPEKDMKVLVFGSVNVYTVRGQYQLQVLDIRPDGVGELYKAFEQLKKRLEAEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ +HK P+P P+ I V TS TGA I DIL + R+P+ +++ P VQG+ I Sbjct: 122 LFAPEHKRPLPRYPRKIGVATSATGAAIHDILHVLQRRYPVDILLCPTIVQGETSADSII 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 ++ LN D+II RGGGS EDLW FN+E + RAI NS +P+I+AIGHET Sbjct: 182 RSLELLNR-------TDADLIITGRGGGSFEDLWSFNEEKVARAIYNSRLPVIAAIGHET 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T++D+AAD+RAPTP+ AAE+AVP + + + L R+ + + I+ + L L Sbjct: 235 DFTISDFAADVRAPTPSAAAEIAVPDRTEMARHIDVLRQRMESALKTQIQNQKKHLEYLS 294 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + L+ LD + L E ++ K + R+ + ++ ++ Sbjct: 295 GRISPDRYRELLNQRTQHLDEVTYRLASRTEYMMQTKVAELGALAGRLNAVSPLNTFER 353 Score = 81.0 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 46/122 (37%), Gaps = 2/122 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +HI +Q +E +K ++ + + R + + H+ ++ R+ Sbjct: 266 RHIDVLRQRMESALKTQIQNQKKHLEYLSGRISPDRYR--ELLNQRTQHLDEVTYRLASR 323 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +++ + L + + NT +RGY Q IT ++ + + F Sbjct: 324 TEYMMQTKVAELGALAGRLNAVSPLNTFERGYCVAQSDQGGTITGVIDIEKGQSLQLKFR 383 Query: 491 DG 492 DG Sbjct: 384 DG 385 >gi|207742511|ref|YP_002258903.1| exodeoxyribonuclease vII large subunit (exonuclease vII large subunit) protein [Ralstonia solanacearum IPO1609] gi|206593903|emb|CAQ60830.1| probable exodeoxyribonuclease vII large subunit (exonuclease vII large subunit) protein [Ralstonia solanacearum IPO1609] Length = 487 Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats. Identities = 133/492 (27%), Positives = 214/492 (43%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ + ++E + + VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 48 VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 106 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 107 QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 166 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K P+P P I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 167 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 226 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + +N E D+IIL RGGGSIEDLW FN+E + RA+A S +PI++ +GHETD Sbjct: 227 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDLPIVAGVGHETD 280 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ D+ AD+RAPTPTGAAE+ P + + + L+ + R + + T++ L + Sbjct: 281 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLDRRAQTVDWLAR 340 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + R RL L L L + R + R+ + + + R Sbjct: 341 RLRSPQAQMRERRTRLAHLEGRLRFALHGRVQRAEHVQRLLAMRLAAARP--DTARERTA 398 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + ++ L + A L +L Sbjct: 399 LQGIEAALARAMRTTLDRAQTRLSHRQAGLELL------------------------APQ 434 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ GY + D + I L + RI G Sbjct: 435 RTLER-----------------------GYAVLLDADGRAIRDPNALHARARIEARLALG 471 Query: 493 QANAIVINKAPP 504 + + P Sbjct: 472 AVDIEIAQAQPK 483 >gi|121604828|ref|YP_982157.1| exodeoxyribonuclease VII large subunit [Polaromonas naphthalenivorans CJ2] gi|120593797|gb|ABM37236.1| Exodeoxyribonuclease VII large subunit [Polaromonas naphthalenivorans CJ2] Length = 439 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 117/487 (24%), Positives = 208/487 (42%), Gaps = 75/487 (15%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + V L + +E+ + V V+GE++G+ +SGH YFSLKD +I +++ Sbjct: 22 VWPVGSLLRAIADSLEARFNPVAVQGELAGF-SRAASGHCYFSLKDGQGQIRCAMFRRAA 80 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + ++F P +G + G++ + + Q+++ES+ +G GTL + K +L +EGLF Sbjct: 81 SLLDFSPRDGQLVELRGRLGVYEPRGELQLVVESMQQAGQGTLFEQFLQLKARLEQEGLF 140 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P +P+ I V+TS A + D++ + R P + V+I+P VQG + E+ Sbjct: 141 DTARKRPLPVMPRAIGVVTSLGAAALHDVVTALQRRAPHIPVVIYPASVQGAQAAGELRG 200 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+L+ E R + D+++L RGGG++EDLW FNDE + RAI S +P++ +GHETD Sbjct: 201 AVLKA---GERRGTDQVDVLLLVRGGGAMEDLWAFNDEALARAIVASPMPVVCGVGHETD 257 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ AD+RAPTPT AAE+ Sbjct: 258 FTIADFCADMRAPTPTAAAELCAQP----------------------------------- 282 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 LS RL ++ ++ R + + H + + + Sbjct: 283 ----QGSWLSALDQVFSRLQNGVDRQMQSHNQRLDWAASRVSQ------PSHLVTRQQAR 332 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + Q + + ++ + ++ L + + ++ Sbjct: 333 LAGIAQSLNHAM-------------------------RSTLRREQLRLQALSSDLPREIT 367 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ + L+ K L+RGY + D IT + DG Sbjct: 368 GSLQRSRHQLERAKLRLELLDPKLVLQRGYAWLADLQGQPITAANMTHIGQPVRATLADG 427 Query: 493 QANAIVI 499 Q + V Sbjct: 428 QVDLTVS 434 >gi|71903834|ref|YP_280637.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS6180] gi|71802929|gb|AAX72282.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS6180] Length = 451 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 10 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 68 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHSLANSQLQTKIER 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 386 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 434 MRDGQLDVEVKDVK 447 >gi|94994736|ref|YP_602834.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS10750] gi|94548244|gb|ABF38290.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS10750] Length = 451 Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 10 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 68 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 386 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 434 MRDGQLDVEVKDVK 447 >gi|283850296|ref|ZP_06367585.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. FW1012B] gi|283574322|gb|EFC22293.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio sp. FW1012B] Length = 473 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 123/523 (23%), Positives = 208/523 (39%), Gaps = 78/523 (14%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + VSEL+ +K +VES V VRG++ SGH YFSLKD + + + ++G Sbjct: 4 VFEVSELTRSIKDVVESEFPFVWVRGQVVNL-SRPGSGHLYFSLKDAEASLAVVWFRGAQ 62 Query: 74 --------------------NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + +G+E + G++T +P YQ++ E + G+ Sbjct: 63 GGKALAGGGRYDPLTGEVYEASLAEGLADGMEVMAAGRLTVYPPRGAYQLVAEVVQEVGA 122 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPL 172 G L E KK L G F K P+P P +AV+T+PTGA +RD ++ R Sbjct: 123 GRLWLEFEALKKDLAARGYFDPARKRPLPRHPLRVAVVTAPTGAAVRDFIRIGRERGHGA 182 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 V I+P VQGD P I A+++ ++++L RGGGS+EDLW FN + Sbjct: 183 AVRIYPTLVQGDAAPTGIVRAMMRAVADDWA------EVLVLVRGGGSLEDLWAFNSVEV 236 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 AI S +P+++ +GHE D T+AD AD+RA TP+ AA++ P +E L L +LE L Sbjct: 237 AGAIFASPLPVLTGVGHEVDVTIADMVADVRAATPSHAAQLLWPEREQLAQRLDDLEMAL 296 Query: 293 NNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 +L+ + + L + L + ++ L+ LE E R Sbjct: 297 GRAAEKLVASREREVAVLARGLAWLSPERRLARLEEAFAGAEARLERAAEHWTAGLARRV 356 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + + + F + +Q + +Q +E + + Sbjct: 357 EGLSESVAAAFGPKALDARQQALARRQDALEAARRWY----------------------- 393 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN- 469 + + + L L RGY+ Sbjct: 394 ------------------------LVDRERRLELAGARLAGLDPLGPLARGYSLATVART 429 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512 F+ ++ ++ ++ I ++G+ A V + Sbjct: 430 GKFLRREADVRPGDKLDIMVYEGRVRATVDTPEGADAPKGGER 472 >gi|209559668|ref|YP_002286140.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes NZ131] gi|226697616|sp|B5XM83|EX7L_STRPZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|209540869|gb|ACI61445.1| Probable exodeoxyribonuclease VII large subunit [Streptococcus pyogenes NZ131] Length = 446 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 63 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 123 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 357 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 381 -----------ARFEKAQDALLSLDTSRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 429 MRDGQLDVEVKDVK 442 >gi|303239903|ref|ZP_07326426.1| exodeoxyribonuclease VII, large subunit [Acetivibrio cellulolyticus CD2] gi|302592613|gb|EFL62338.1| exodeoxyribonuclease VII, large subunit [Acetivibrio cellulolyticus CD2] Length = 409 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 140/362 (38%), Positives = 218/362 (60%), Gaps = 12/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS ++ ++K I+ + LS++ VRGE+S ++ HSSGH YF+LKD +S I +++ Sbjct: 10 ENILSVSLVNRYIKEIISRDMILSNLWVRGEVSNFKN-HSSGHMYFTLKDENSLIKCVMF 68 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + + ++F+PE G++ ++ G ++ F +YQ+ E +I G G L A E+ KK+L E Sbjct: 69 RTQNSYLKFMPENGMKVIIRGYVSLFERDGQYQLYAEEMISDGVGNLHIAFEQLKKRLSE 128 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EGLF + K IPF+P I V+TS TGAVIRDI+ + RF + IFPVKVQG K Sbjct: 129 EGLFDNSFKKRIPFMPGSIGVVTSSTGAVIRDIINVLDRRFYNANIKIFPVKVQGAGAAK 188 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI+ AI +LN LK D+II+ARGGGS+E+LW FN+E++ R+I NS IP+ISA+G Sbjct: 189 EISRAINKLNELKC------VDVIIVARGGGSLEELWPFNEEIVARSIFNSKIPVISAVG 242 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 H+TD+T+ D+ AD+RAPTP+ AAE+ +P K L + + LE R + ++R +K K L+ Sbjct: 243 HDTDYTICDFVADVRAPTPSAAAEIVMPEKHMLVNRISELEIRFRSALLRNVKIKRKRLD 302 Query: 309 --SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + R +LD L ++L+ + R +I ++ + + + Sbjct: 303 ELKNAAVFRQPYDRVYQERMKLDILNKDLKKAFLVKKERSRSRLQFLIGKLDALSPLTIL 362 Query: 367 QK 368 + Sbjct: 363 SR 364 Score = 97.5 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 51/137 (37%), Gaps = 3/137 (2%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM--LREQTKNRIFYLHTHIKKLITR 426 + ++ + +E + L K++++ L + Q +R++ + L Sbjct: 271 EKHMLVNRISELEIRFRSALLRNVKIKRKRLDELKNAAVFRQPYDRVYQERMKLDILNKD 330 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRI 485 ++ K + + + L + + L RGY+ ++ ++ + ++ +I Sbjct: 331 LKKAFLVKKERSRSRLQFLIGKLDALSPLTILSRGYSIVKAADDKHVVKSINDVRAGEQI 390 Query: 486 LINFFDGQANAIVINKA 502 +N DG V + Sbjct: 391 EVNLEDGNLECTVNSVK 407 >gi|253998648|ref|YP_003050711.1| exodeoxyribonuclease VII large subunit [Methylovorus sp. SIP3-4] gi|253985327|gb|ACT50184.1| exodeoxyribonuclease VII, large subunit [Methylovorus sp. SIP3-4] Length = 400 Score = 305 bits (780), Expect = 2e-80, Method: Composition-based stats. Identities = 121/356 (33%), Positives = 194/356 (54%), Gaps = 8/356 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+EL+ + +E V GEIS +SGH YFSLKD +++ ++++G Sbjct: 8 ILTVTELNRLARDTLERAFPLFWVSGEISNLT-RAASGHWYFSLKDAGAQVRCVMFRGRN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + +++ P EG + +T + +Q+ IE L +G GTL A EK K KL EGLF Sbjct: 67 SYLDWQPREGDKVEARALVTLYEARGDFQLTIEFLQRAGLGTLFEAFEKLKAKLQAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K PIP P+ I ++TSP A +RD+L + R P L VII+P VQG +IA Sbjct: 127 DAALKRPIPAHPQRIGIVTSPDAAALRDVLSTLRRRMPSLEVIIYPTPVQGKGAATQIAA 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGS+EDLW FN+E++ RAI S+P+IS +GHETD Sbjct: 187 AIETASARAE------VDVLIVCRGGGSMEDLWQFNEEIVARAIHGCSMPVISGVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+AAD+RA TPT AAE+ ++ L + L RL+ + +L+ ++ ++ L + Sbjct: 241 FTIADFAADVRAATPTAAAELVSADRQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTR 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + Q ++ ++L + L+ + + R+ R + + + + Sbjct: 301 RLLSPSQQIAHRGHQLQQWQWRLQQAMRQKLDRQTRQLQTLQQNLVHLNPQAILSR 356 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 50/134 (37%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 RQ +L+ Q + + + + ++ + ++ + + L +I + +++ R++ Sbjct: 266 RQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTRRLLSPSQQIAHRGHQLQQWQWRLQQ 325 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + K+ + + L + L RGYT + + + + L I + Sbjct: 326 AMRQKLDRQTRQLQTLQQNLVHLNPQAILSRGYTLAYAEDGSLLKSVQTLQKGKGITLQL 385 Query: 490 FDGQANAIVINKAP 503 DG V P Sbjct: 386 TDGLVKTTVDQVHP 399 >gi|296272228|ref|YP_003654859.1| exodeoxyribonuclease VII large subunit [Arcobacter nitrofigilis DSM 7299] gi|296096403|gb|ADG92353.1| exodeoxyribonuclease VII, large subunit [Arcobacter nitrofigilis DSM 7299] Length = 395 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 132/366 (36%), Positives = 204/366 (55%), Gaps = 11/366 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVS L+ +K ++E+ V V+GEIS HSSGH YFS+KD +S I ++++G Sbjct: 6 SVSTLNNQIKSLLETTFIGVYVQGEISNLT-YHSSGHIYFSIKDENSTISCVMFRGNAQY 64 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++F E G++ ++ G IT + YQ++ + P G G+L A E+ K+KL +EGLF Sbjct: 65 LKFKLEVGMKIIISGSITAYIPRGNYQLMCTKIDPDGQGSLALAFEQLKEKLQKEGLFDL 124 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 K +P PK IA++TSPTGA I D+ + R+P + +I+ P VQG+ +I N+I Sbjct: 125 SIKKTLPKYPKNIALVTSPTGAAIEDMKKVAQNRWPLINLILIPTLVQGEGSKFDIVNSI 184 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + ++L D+II+ RGGGSIEDLW FN+E++ RAI + PIISA+GHE D+ Sbjct: 185 KKADSL-------NYDVIIVGRGGGSIEDLWAFNEEVVARAIYEARTPIISAVGHEVDFL 237 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D+ AD+RA TP+ A E+A+P K L NL+ N R++ K L + K Sbjct: 238 ISDFVADVRAATPSNAMEIALPDKNEHLQYLDNLQVEFENRFKRVLYNKEQVLLNYRKYF 297 Query: 315 PN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 D+ S + +D L + L I+ +K N++ N +S+ I+ Sbjct: 298 EQHSLDKKFSFIQKEIDYLKSNFSNTLSQILRQKQNELNYLKNAYESNHPDKKIKDGYVQ 357 Query: 373 ILEKQQ 378 I + Q Sbjct: 358 ISKNNQ 363 >gi|251782892|ref|YP_002997195.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242391522|dbj|BAH81981.1| exodeoxyribonuclease VII large subunit [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 446 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 139/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 63 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK +P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 123 FEQKHKQLLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESKLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + + L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVAKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 357 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 381 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 429 MRDGQLDVEVKDVK 442 >gi|220931493|ref|YP_002508401.1| exodeoxyribonuclease VII, large subunit [Halothermothrix orenii H 168] gi|254783702|sp|B8D2H9|EX7L_HALOH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|219992803|gb|ACL69406.1| exodeoxyribonuclease VII, large subunit [Halothermothrix orenii H 168] Length = 405 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 142/364 (39%), Positives = 218/364 (59%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ Y+VSE++ + ++ +S L+ + + GEIS + H+SGH YF++KD S I +I Sbjct: 1 MESKIYTVSEVTGRITELLTSDSVLNDLWITGEISNF-HHHNSGHMYFTIKDERSCIKSI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++G K++F PE+G++ G + + YQ ++ L P+G G L A E+ K+KL Sbjct: 60 MFRGYNRKLKFEPEDGLKVNAHGYVGVYKPRGDYQFYVDHLEPAGKGALYLAFEQLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 +EGLF++ HK IP +P+ I V+TSPTGA IRDIL + RF + V+I P VQG + Sbjct: 120 EKEGLFNEDHKKEIPLLPRKIGVVTSPTGAAIRDILSVVKRRFKNVSVLIVPSLVQGKKA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +EI I LN+ D+II++RGGGSIE+LW FN+E++ RAI NS IP+IS Sbjct: 180 AREIVEGIEYLNSR------DDIDVIIVSRGGGSIEELWSFNEEVVARAIYNSRIPVISG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTP+ AAE+A+ + L+ L+NL RL N + IK + Sbjct: 234 VGHETDFTIADFVADLRAPTPSAAAELAISNRIELEKHLVNLYTRLYNSVSYQIKSYRDR 293 Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN SL K L ++ +D L R L+ +E + F + ++ S + Sbjct: 294 LNSLSLKKVLTRPEELFIQKIQYVDELSRRLDWAMEGRLKDAREKFRVLSGKLDSLSPLK 353 Query: 365 NIQK 368 I++ Sbjct: 354 TIER 357 Score = 97.5 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 6/161 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + + +E ++H+ + + + + K L+ Sbjct: 236 HETDFTIADFVADLRAPTPSAAAELAISNRIELEKHLVNLYTRLYNSVSYQIKSYRDRLN 295 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L + + ++ +L R+++ + ++K + + L S + T+ Sbjct: 296 SLSLKKVLTRPEELFIQKIQYVDELSRRLDWAMEGRLKDAREKFRVLSGKLDSLSPLKTI 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 +RGY+ + I + I DG + V Sbjct: 356 ERGYSITLKGS-EPINSITQVDIGDVIRSRLSDGIILSQVK 395 >gi|94990758|ref|YP_598858.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS10270] gi|94544266|gb|ABF34314.1| Exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS10270] Length = 451 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 10 LTVTHLTKYLKLKFDHDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 68 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 128 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 188 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 301 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 302 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 362 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 386 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 433 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 434 MRDGQLDVEVKDVK 447 >gi|302335599|ref|YP_003800806.1| exodeoxyribonuclease VII, large subunit [Olsenella uli DSM 7084] gi|301319439|gb|ADK67926.1| exodeoxyribonuclease VII, large subunit [Olsenella uli DSM 7084] Length = 471 Score = 304 bits (779), Expect = 2e-80, Method: Composition-based stats. Identities = 128/492 (26%), Positives = 211/492 (42%), Gaps = 34/492 (6%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIWK 70 SV E K V+ L + VRGE+SG+RG SGH YF LKD S +DAI+W+ Sbjct: 4 SQPLSVREAVDIAKRGVD-ALPALVVRGEVSGFRGPNARSGHCYFQLKDEASSMDAIVWR 62 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G F ++G++ + G+ + S K + + +G G L + + ++L E Sbjct: 63 GIYQSAGFRLKDGLQVQMDGRFNVYNASGKLSFVARHVELAGEGLLRQQVAELARRLERE 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GL + K PIP + V+TS +G+VI D+ + +S R P + +++ VQG P Sbjct: 123 GLMEEGRKRPIPRFCSRVVVVTSLSGSVIEDVKRTLSRRNPLVEILVAGCSVQGSSAPPT 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I A+ RPD I+L RGGGS EDL FNDE + RA+A S +P+++ IGH Sbjct: 183 IIRALAM-------AADARPDAILLVRGGGSFEDLMCFNDEALARAVAASPVPVVTGIGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D ++ D AD R TPT AAE P + ++ S+ + + RL + Sbjct: 236 EPDTSICDMVADRRCSTPTAAAESVAPGIDEIERSINDRQLRLVRAMSS----------- 284 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L RL L +LE+ I R+ + R + + Sbjct: 285 ----------QLEGETQRLGTLGELARRSLEVRISRERLRIEALAQRRCLTDPYASYEDL 334 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + +Q + + L + + LH+ Q R+ + L + Sbjct: 335 SAQLELTEQRLRDAPLRSLVHRAQSLESLGQSLHVAGPQAWRRLGFEVERDGAL---LRG 391 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 I + ++ ++ + L + + L RGY+ ++D + + + + I + Sbjct: 392 IAARMLRPHEADLARSAAALDALSPLRVLARGYSVVRDGSGHVMGDAGGASVGDTIEVTM 451 Query: 490 FDGQANAIVINK 501 G A V + Sbjct: 452 ARGSLEAEVKDI 463 >gi|15675404|ref|NP_269578.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes M1 GAS] gi|21910692|ref|NP_664960.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS315] gi|28895618|ref|NP_801968.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes SSI-1] gi|71911046|ref|YP_282596.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS5005] gi|54037078|sp|P67453|EX7L_STRP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|54041043|sp|P67452|EX7L_STRP1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|13622590|gb|AAK34299.1| putative exodeoxyribonuclease VII (large subunit) [Streptococcus pyogenes M1 GAS] gi|21904895|gb|AAM79763.1| putative exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS315] gi|28810867|dbj|BAC63801.1| putative exodeoxyribonuclease VII large subunit [Streptococcus pyogenes SSI-1] gi|71853828|gb|AAZ51851.1| exodeoxyribonuclease VII large subunit [Streptococcus pyogenes MGAS5005] Length = 446 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 140/494 (28%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPT--HQYFSLKDESAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EG Sbjct: 63 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEPDGIGALALQFEQLKKKLTAEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F +HK P+P I VITSP+GAVIRDI+ +S RFP + +++FP KVQGD +E+ Sbjct: 123 FEQKHKQPLPQFVSKIGVITSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGDGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIRRANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL L + ++ + + + + + + L I++ Sbjct: 297 SQSVIFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQLQTKIER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + ++ + + Sbjct: 357 YQDRVATAKRLLMANMASQYDSQL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N + + ++ I Sbjct: 381 -----------ARFEKAQDALLSLDASRIIARGYAMIE-KNQALVASVSQITKGDQLTIK 428 Query: 489 FFDGQANAIVINKA 502 DGQ + V + Sbjct: 429 MRDGQLDVEVKDVK 442 >gi|160915118|ref|ZP_02077331.1| hypothetical protein EUBDOL_01126 [Eubacterium dolichum DSM 3991] gi|158432917|gb|EDP11206.1| hypothetical protein EUBDOL_01126 [Eubacterium dolichum DSM 3991] Length = 447 Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats. Identities = 119/498 (23%), Positives = 223/498 (44%), Gaps = 63/498 (12%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV+ L +++K ++ + L + ++GEIS H SGH YFSLKD ++I +++ Sbjct: 7 SVTSLVHYIKSSLDQDMRLRSLKIKGEISNLT-KHRSGHWYFSLKDTRAKISCVMFASNA 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + +EG++ +V G ++ + Q+ + ++ G G L LE KKKL EGLF Sbjct: 66 ARCTIDVKEGMQVIVSGSVSMYEAGGSLQLYVTAIQNDGLGDLFLQLEAIKKKLAAEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + + K P+P P I ++T+ +GA ++D++ I+ R+P+ V ++P +VQG + + I Sbjct: 126 APERKKPLPLYPMSIGLVTAKSGAALQDMIATIARRWPIANVSLYPAQVQGIQASQSIIT 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + + + + D+I+LARGGG+IEDLW FNDE + R IA+ ++S +GHE+D Sbjct: 186 MLKEADAMGH-------DVILLARGGGAIEDLWCFNDESLARVIADMQTVLVSGVGHESD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL- 311 TL DY +D RA TPT AAE+ P ++ L ++ +L + I + + L + Sbjct: 239 TTLVDYVSDARAATPTAAAELITPDIYEVKQQLAQIQTKLLHKIENQLILQRQHLEHIKA 298 Query: 312 -KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + L + + R +L + + ++ + + + + N + + ++ Sbjct: 299 SRYLQDPLSYIDQERLKLA-MHIKAFGYMQQNLAVTRKQLSKLQNDLAVYSQKMTVSSSQ 357 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +K+ + Sbjct: 358 HLKEQKRA------------------------------------------------MSLQ 369 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + ++ + +L +++ L RGY + + I +L + I I Sbjct: 370 MEKLYADAQANIIKNSALLDAYSPLKILSRGYQIVYQKD-QVIKSIHDLDLQKMIRIRMQ 428 Query: 491 DGQANAIVINKAPPKEQP 508 DG A A V+ K + + Sbjct: 429 DGFATASVLEKEEIEWKK 446 >gi|237750917|ref|ZP_04581397.1| exodeoxyribonuclease VII large subunit [Helicobacter bilis ATCC 43879] gi|229373362|gb|EEO23753.1| exodeoxyribonuclease VII large subunit [Helicobacter bilis ATCC 43879] Length = 481 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 131/490 (26%), Positives = 222/490 (45%), Gaps = 21/490 (4%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 VS+L+ +K ++ES+ S+V V GE+SG+ H+SGH YF+LKD ++ I ++ Sbjct: 10 VLQVSQLTMQIKSLLESDFSYVEVEGEVSGFTH-HNSGHIYFNLKDENATISCTFFRHNA 68 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + G + + G I+ FP Y + I + SG G L E KK+L E F Sbjct: 69 RNNPIKLQNGDKIIAKGNISVFPPRGTYNLNIVKCVHSGIGDLKAQYEALKKRLEERNYF 128 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +P PK I ++TS T A ++D+++ S R+ L I+ QG E IA Sbjct: 129 CKNKP--LPRFPKRIILLTSQTSAALQDMIKVASKRYCLCEFILIDTLTQGREAKHSIAK 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + + L DI++LARGGGSIEDLW FN+ ++ AI P++SAIGHE D Sbjct: 187 NLAYADRL-------GADILVLARGGGSIEDLWSFNEMEVLEAIFACKTPVVSAIGHEID 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+DY AD+RAPTP+ A EM + K++L + L ++E+ L + + I K + LN L + Sbjct: 240 YLLSDYVADVRAPTPSAAMEMILCDKDNLITQLCDMESMLTHTMQTHITQKKSILNHLAQ 299 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 +L N Q ++ + L L + L+ +++ +K ++ + + Sbjct: 300 SLEILNPLQKIAQHKLLLQTLTQNLQDSIKWFYTQKKHALLQQQEKLDLAKPTQKLLIMK 359 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 I + + + + K+ L + + L + Sbjct: 360 TEIQSLSKKLHGEFSYIVEQKINQTKQIELELKN------AMLQMMTRKRAMLNFNLNDS 413 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + ++ ++ IL + + G+ I ++ I Q L I I Sbjct: 414 MQNALRQKRLMLNNLIDILHALDPSKKAQYGFAQIL-KDDKLI-QVSELQENDVIEIVDS 471 Query: 491 DGQANAIVIN 500 G NA ++ Sbjct: 472 SGIRNARILG 481 >gi|120602766|ref|YP_967166.1| exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris DP4] gi|120562995|gb|ABM28739.1| Exodeoxyribonuclease VII large subunit [Desulfovibrio vulgaris DP4] Length = 459 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 122/506 (24%), Positives = 208/506 (41%), Gaps = 76/506 (15%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN--- 74 EL+ ++ +E +V V+G++S SSGH YF+LKD + ++ + ++G+ Sbjct: 2 RELTRAIRDAIEGGFPYVWVQGQVSNL-SRPSSGHLYFTLKDEEAALNCVWFRGSQRDAE 60 Query: 75 ----------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + G E L G++T + YQ+++E +G G L Sbjct: 61 TFDPLTGEVFEDGPRPGLSRTVRNGQELLCAGRLTVYAPRGGYQLVVEMAQDAGLGRLHL 120 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIF 177 A E+ K++L +G F+ + K P+P P+ +AV+T+P GA I D L+ R + I Sbjct: 121 AFEELKRRLSAKGYFAVERKRPLPRSPRRVAVVTAPRGAAIHDFLRIAGERGVGCEIRIH 180 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 PV VQG E P + E ++I++ RGGGS+EDLW FNDE + I Sbjct: 181 PVPVQGAEAPP------RIAAAIAEAGRLGWAEVIVVIRGGGSLEDLWAFNDEAVADVIY 234 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S +P+++ +GHE D+T+AD AD+RA TP+ AA++ + L LE RL+ Sbjct: 235 ASPVPVLAGVGHEVDFTMADMTADVRAATPSHAAQLLWRERREFVQGLDELEMRLSRAFD 294 Query: 298 RLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 R L +L +AL + + L R L E + + ++ Sbjct: 295 RAFTTGEGRLAALERALGWLSPVRALERYDERFAESASRLARAWEAGYRLRSQRVEQLVA 354 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 ++ F ++K + + + I Sbjct: 355 ALRHSFGPEALEKRQARLQTLHASL--------------------------------IHA 382 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 T + + R V L + + L+RGY+ ++ + F+ Sbjct: 383 GQTQLNTVERR---------------VENLGVRLAALDPEAPLQRGYSLVRCPDGRFLKS 427 Query: 476 KRNLATKTRILINFFDGQANAIVINK 501 R A R+ I DG+ +V + Sbjct: 428 IREAAPGQRLDIVLHDGEVGTVVTSV 453 >gi|78357247|ref|YP_388696.1| exodeoxyribonuclease VII large subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219652|gb|ABB39001.1| Exodeoxyribonuclease VII large subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 486 Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats. Identities = 123/527 (23%), Positives = 212/527 (40%), Gaps = 72/527 (13%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +SV E++ +K+ +E+ V VRG++S +SGH YFSLKD + + + ++ Sbjct: 2 TKIFSVGEVTRGIKNTLEAAYPFVWVRGQVSNL-SRPASGHVYFSLKDEDASLACVWFRH 60 Query: 72 TLNK-------------------IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 + + G E L G++T + YQ+++E G Sbjct: 61 AQRGEETFDPLTGEVFDDGPRPGLAAVMRNGQEMLCAGRVTVYGPRGTYQLVVELAQDVG 120 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-P 171 G L E+ KKKL G F K P+P P +AV+T+ TGA +RD ++ + R Sbjct: 121 LGELHLRFEELKKKLAGMGWFDAARKRPLPRHPLRVAVVTAATGAAVRDFVRIAADRGSG 180 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 + I+PV VQGD+ P IA A+ + +++L RGGGS+EDLW FNDE Sbjct: 181 CSIRIYPVPVQGDDAPPRIAAALELAAAHDWAQ------VVVLIRGGGSLEDLWAFNDER 234 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + +A+ S +P+++ IGHE D +AD AD+RA TP+ AA++ P ++ L L + Sbjct: 235 VAKAVFESPLPVLTGIGHEVDTAIADMVADVRAATPSHAAQLLWPERQELVQRLDDASQL 294 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 L+ ++ + ++ +AL + + R F Sbjct: 295 LDRAWELGMQEREKSVKECERALHWLSP--------------------QRSLERLDERFA 334 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + Q + E+++ LR+ F +L Sbjct: 335 EA---------VRRLMAAAQALTERKERRLAAETASLRHAFGPAALDTGLLA-------- 377 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 +++L R+ + + T L++ L+RGY+ +Q + Sbjct: 378 --------VRQLAARLVRAGESFAERAAVRLERETLRLKAADPLLPLERGYSILQRPDGG 429 Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518 F+ L + + DG A+ V K Sbjct: 430 FVRSVAGLEAGDNLRVLVRDGAADVAVTAVHAVSAAEAAGMPAGGKK 476 >gi|167770738|ref|ZP_02442791.1| hypothetical protein ANACOL_02084 [Anaerotruncus colihominis DSM 17241] gi|167667333|gb|EDS11463.1| hypothetical protein ANACOL_02084 [Anaerotruncus colihominis DSM 17241] Length = 408 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 121/355 (34%), Positives = 195/355 (54%), Gaps = 9/355 (2%) Query: 17 VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 VS+L+ ++K +++S+ L + VRGEIS + + SGH YF+LKD + I ++++G + Sbjct: 9 VSQLNRYVKAMLDSDSALDGLMVRGEISNFLCHYKSGHMYFTLKDETAAIKTVMFRGHAS 68 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ F PE G+ +V G ++ + YQ + P G G L A E+ K+KL EGLF Sbjct: 69 QLRFRPENGMSVIVSGSVSLYERDGSYQFYATDMQPDGIGALHLAFEQLKEKLAREGLFD 128 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 + K P+P P+ I V+TS A +DIL +S R+PL V+++P +VQG+ K IA+ Sbjct: 129 EGRKRPLPRYPERIGVVTSEGAAAFQDILNILSRRYPLATVVLYPAQVQGEGAAKTIADG 188 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + LN D++I+ RGGGS EDLW FNDE + R IA+S IP+ISA+GHE D+ Sbjct: 189 VRALNAAHA------CDVMIVGRGGGSAEDLWAFNDEALARVIASSEIPVISAVGHEVDF 242 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+AD+ AD RAPTP+ AAE+A P +Q L +L R + + ++ Sbjct: 243 TIADFVADRRAPTPSAAAELAAPNIADVQYYLSDLLERCAAQTQGRVASMQLRMRAIQAG 302 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + S+ L + R+ L ++ +E + ++ + + + + Sbjct: 303 MAASESVLQSMKQRVKTLGLAVQAAVERRLSGACEQVRYLSALAEERSPMRILSR 357 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 11/122 (9%), Positives = 40/122 (32%), Gaps = 1/122 (0%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + + + + ++ + +++ + + +K L ++ + ++ Sbjct: 277 LLERCAAQTQGRVASMQLRMRAIQAGMAASESVLQSMKQRVKTLGLAVQAAVERRLSGAC 336 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 V + + + + L RGY+ ++ + + DG+ + VI Sbjct: 337 EQVRYLSALAEERSPMRILSRGYSLTSSKRG-PVSSVDQVRVGELLFSRLADGEIISQVI 395 Query: 500 NK 501 Sbjct: 396 ET 397 >gi|329117425|ref|ZP_08246142.1| exodeoxyribonuclease VII, large subunit [Streptococcus parauberis NCFD 2020] gi|326907830|gb|EGE54744.1| exodeoxyribonuclease VII, large subunit [Streptococcus parauberis NCFD 2020] Length = 442 Score = 303 bits (777), Expect = 4e-80, Method: Composition-based stats. Identities = 150/494 (30%), Positives = 218/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R H YFSLKD + I A +W G Sbjct: 5 LSVSNLTKYLKMKFDRDPYLERVYLTGQVSNFRKRPK--HQYFSLKDEGAVIQATMWAGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F EEG++ V+G+I + S Y IIIE P G G L E+ KKKL EG Sbjct: 63 YSKLGFDLEEGMKLNVVGRIQLYEPSGAYSIIIERAEPDGIGALALQFEQLKKKLTSEGF 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK +P + V+TSP+GAVIRDI+ IS RFP + +++FP KVQG+ +E+ Sbjct: 123 FDDRHKQALPQFVTKVGVLTSPSGAVIRDIITTISRRFPGVEILLFPTKVQGEGAAQEVV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + I++ N D++I+ RGGGSIEDLW FN+E +V AI S +PIIS++GHET Sbjct: 183 DNIIRANQR------DDLDLLIVGRGGGSIEDLWAFNEEKVVHAIFESQLPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A PV + + IN I + + L Sbjct: 237 DITLADFVADRRAATPTAAAELATPVTKADILAWINERQTRAFQASNRIVRENQERVNKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LDRL L + + I + +R++S L+ I + Sbjct: 297 AQSVIFRQPERLYDGYLQKLDRLNMALVSSFKENIASNKDSEIQMRHRLQSIDLMSRINR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + I Q + Sbjct: 357 YQDRITSLSQQ-----------------------------------------------LT 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + +S L S + RGY + I + + I Sbjct: 370 YDAKASFESKLRRFEKAQDTLLSLDTSRIIARGYAML-HKGEEVIASVEQIEKGDHLNIQ 428 Query: 489 FFDGQANAIVINKA 502 DGQ V + Sbjct: 429 LKDGQLEVEVKDVN 442 >gi|227878892|ref|ZP_03996797.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus crispatus JV-V01] gi|256849772|ref|ZP_05555203.1| exodeoxyribonuclease VII EX7L [Lactobacillus crispatus MV-1A-US] gi|262046529|ref|ZP_06019490.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus MV-3A-US] gi|227861526|gb|EEJ69140.1| exodeoxyribonuclease VII (large subunit) EX7L [Lactobacillus crispatus JV-V01] gi|256713261|gb|EEU28251.1| exodeoxyribonuclease VII EX7L [Lactobacillus crispatus MV-1A-US] gi|260572978|gb|EEX29537.1| exodeoxyribonuclease VII, large subunit [Lactobacillus crispatus MV-3A-US] Length = 455 Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats. Identities = 135/498 (27%), Positives = 245/498 (49%), Gaps = 58/498 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 AENKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ K++F PEEG++ V+G ++ + YQ E + P+G G L L++ + KL Sbjct: 61 MFRSFFEKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAEQMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF HK P+P P IAV+TS +GAVI DI+ + RFP + ++P +VQGD Sbjct: 121 AKEGLFDPAHKKPLPHFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAQVQGDTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS+ Sbjct: 181 ADSLIRAMQQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEKVVRQVYAMPMPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL D AD RA TPT AAE A P + + L ++L + +I+ K + Sbjct: 236 VGHETDTTLCDLVADARAATPTAAAEYATPNTLDELAHIKQLTSQLVASMQNIIRSKRDR 295 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ + + + ++D+L + L+++++ + + + + R+ S Sbjct: 296 LSRVQNSVIMREPTRLYDQQIQQVDQLKQRLQNSMQNRVTHSAQSYQLLKQRLFSVSPDK 355 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I + +Q QQ + ++ + Sbjct: 356 KINQLQQQKQFLQQRMIDNMQHY------------------------------------- 378 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +K+ + + L ++ TL+RG+ + + I+ + + R Sbjct: 379 ----------LKNKRNVFTQVMQQLDDYSPLKTLERGFVYSTNEHGETISSVKQVQKDDR 428 Query: 485 ILINFFDGQANAIVINKA 502 +L++F DGQ +A+V Sbjct: 429 LLLHFKDGQVDAVVTKIK 446 >gi|182417993|ref|ZP_02949300.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum 5521] gi|237668474|ref|ZP_04528458.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378164|gb|EDT75699.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum 5521] gi|237656822|gb|EEP54378.1| exodeoxyribonuclease VII, large subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 399 Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats. Identities = 128/376 (34%), Positives = 221/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VSE++ ++K +++++ +++ V+GEIS + HSSGH YFSLKD+ +++ + Sbjct: 1 MKIKTLTVSEVTNYIKRVLDNDFILNNLSVKGEISNLK-YHSSGHIYFSLKDDKGKVNCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG + ++F EEG+E ++ G+ + +P + +QI + + G G L EK K+KL Sbjct: 60 MFKGNASFLKFKLEEGMEVIICGRASIYPATGSFQIYCDEIQKEGQGELFIKFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 +EG F ++K PIP PK + V+TSPTGA IRDI+ R + ++++P KVQG Sbjct: 120 SKEGYFDVENKMPIPAYPKRVGVVTSPTGAAIRDIINVSRRRNDSIDIVLYPAKVQGVGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 KE+ I N D+II+ RGGGSIE+LW+FN+E + + +S IPIISA Sbjct: 180 YKEVMEGIKYFN------MKNNVDVIIVGRGGGSIEELWNFNEEELAMTVYDSHIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T+ D+ +D RA TP+ AE+AVP+K + +++ NL L++ I IK IN Sbjct: 234 VGHEIDYTICDFVSDFRAVTPSQGAEIAVPLKSEILNNIDNLRKNLDDNIEYKIKSCINE 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 +N+ + L + ++ S +D+L L ++ + ++ ++ H+ N + + Sbjct: 294 INNAERILKIHSPLSLIANSYLEVDKLKERLNFAIKTKLNKEKKNIEHLNNLLIAYNPTK 353 Query: 365 NIQKNRQHILEKQQHI 380 I+K I + + +I Sbjct: 354 VIEKGYAIIEDDENNI 369 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 52/124 (41%), Gaps = 2/124 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 +I +++++ ++ ++ + A + + I + + KL R+ F + Sbjct: 271 NIDNLRKNLDDNIEYKIKSC--INEINNAERILKIHSPLSLIANSYLEVDKLKERLNFAI 328 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 K+ ++ +L ++ +++GY I+D NN I K L + ++ I D Sbjct: 329 KTKLNKEKKNIEHLNNLLIAYNPTKVIEKGYAIIEDDENNIIISKNQLNEEKKLNIILKD 388 Query: 492 GQAN 495 G+ Sbjct: 389 GKVK 392 >gi|283781732|ref|YP_003372487.1| exodeoxyribonuclease VII, large subunit [Pirellula staleyi DSM 6068] gi|283440185|gb|ADB18627.1| exodeoxyribonuclease VII, large subunit [Pirellula staleyi DSM 6068] Length = 405 Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats. Identities = 127/371 (34%), Positives = 198/371 (53%), Gaps = 11/371 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + + SV E + ++ ++E S V V GE+S SGH YF+LKD+ Sbjct: 1 MSSTDESTPENA--LSVGEFTRLIRGVLEMQFSGVWVSGEVSEVT-RPMSGHIYFTLKDD 57 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++W+ ++++F EEG E L +G I +P YQ+++ +P G G + A Sbjct: 58 EAQLRCVMWRSAASRLKFKIEEGSELLCLGDIDIYPPRGSYQLVVRQAVPQGMGAMQLAF 117 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 ++ KKL EGLF K P+P P+ +A +TSPTGA +RD L+ R+P L V+I P Sbjct: 118 QQLHKKLAAEGLFDPARKRPLPKFPRKVAFVTSPTGAAVRDFLEVARRRWPGLSVLIIPA 177 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ EI I N L + RPD++++ RGGGS+EDLW FN+E +VRAI S Sbjct: 178 RVQGEGAAAEIVRGIQIANRLAD-----RPDVLLVGRGGGSVEDLWCFNEEPVVRAIYAS 232 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP++SA+GHE D TLAD ADLRA TP+ AAE VP + L +++ RL + + Sbjct: 233 EIPVVSAVGHEIDVTLADLVADLRALTPSEAAERIVPSRAELLERIMSARTRLASALAST 292 Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + L + + L + L RLD L L +++ + R + + Sbjct: 293 TRQARRRLEGLAQRRVLSHPRDRLQSIAERLDLLDERLRSSVKRKLERLADRQAQLAASL 352 Query: 358 KSDFLIHNIQK 368 S + + + Sbjct: 353 HSLSPLAVLGR 363 Score = 98.3 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 3/147 (2%) Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIF 414 + I +R +LE+ + L + + ++ L R ++R+ Sbjct: 258 LTPSEAAERIVPSRAELLERIMSARTRLASALASTTRQARRRLEGLAQRRVLSHPRDRLQ 317 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFI 473 + + L R+ + K++ + L S + L RGY+ Q +N + Sbjct: 318 SIAERLDLLDERLRSSVKRKLERLADRQAQLAASLHSLSPLAVLGRGYSVTQREADNRVV 377 Query: 474 TQKRNLATKTRILINFFDGQANAIVIN 500 + T + G+ +IV Sbjct: 378 ESPADAPDGTILRTRVAGGEVRSIVAG 404 >gi|47093748|ref|ZP_00231498.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes str. 4b H7858] gi|47017869|gb|EAL08652.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes str. 4b H7858] Length = 425 Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats. Identities = 142/474 (29%), Positives = 232/474 (48%), Gaps = 58/474 (12%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 + V VRGEIS + +SGH YF++KD + + ++++ + KI F+PE+G+ L+ G+ Sbjct: 1 MKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFHKAVQKIGFVPEDGMNVLITGR 59 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 I F + +YQ E + P G G L LE+ K +L +EGLF++ HK +P P +AV+ Sbjct: 60 IGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKEGLFAETHKKVLPSFPSKVAVV 119 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 TS TGA +RDIL I R P + VI++P VQG++ ++I I ++N D Sbjct: 120 TSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQKIVENIGKINQR------NDID 173 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 ++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GHETD+ L+D++AD+RA TPT A Sbjct: 174 VMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGHETDFALSDFSADVRAATPTAA 233 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRL 328 AE+AVP L+ L + RL + + ++ K +L L + L L R Sbjct: 234 AELAVPDYRDLEERLAERKYRLLAVTRQELERKERSLEQLKQHLILNGPKHQLEQQMERT 293 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 D L + IF K F+ + +R+ I+ ++ + + Q +E+ +K Sbjct: 294 DYFSERLNNAFSKQIFVKQTVFDRLNDRLHYYHPNKEIELQKEQMALRLQALEKAMK--- 350 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 +L ++ +I Sbjct: 351 -----------QLLKDKQQSFFRQIDA--------------------------------- 366 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 L+ + + LKRG+ N + + L I + GQ A++ K Sbjct: 367 LEHLSPLSLLKRGFGVTY-KENMLVKSVQELEVGDNIQVKMQGGQIEALITAKE 419 >gi|91203444|emb|CAJ71097.1| strongly similar to exodeoxyribonuclease VII large chain Escherichia coli (K12) [Candidatus Kuenenia stuttgartiensis] Length = 412 Score = 303 bits (775), Expect = 6e-80, Method: Composition-based stats. Identities = 138/370 (37%), Positives = 211/370 (57%), Gaps = 10/370 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++S ++ +++ +E SHV + GE+S + SSGH Y +LKD H++I A+I+K Sbjct: 18 ILTISGITGKIRNSLEQGFSHVWITGEVSNLK-KPSSGHLYLTLKDEHAQIQAVIFKSVA 76 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N I+F ++G+E L G IT + +YQIIIE++ P G G L A K K++L +EGLF Sbjct: 77 NWIKFDLKDGMEVLAFGSITVYEPRGQYQIIIENIEPKGFGALQQAFLKLKERLGKEGLF 136 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +K P+P +P+ IA++TS TGA I+DIL I+ RF + ++I+PV+VQG+ +EIAN Sbjct: 137 DPCYKKPLPLLPQKIAIVTSLTGAAIKDILNVINRRFAKMEILIYPVRVQGEGAAREIAN 196 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI LNT+ D+II+ RGGGS+EDLW FN+E++ R+I S IP+ISA+GHE D Sbjct: 197 AIDNLNTIA------GIDVIIVGRGGGSLEDLWAFNEEVVARSIFTSKIPVISAVGHEID 250 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNSL 310 T++D AD+RA TPT AAE+ VP + L +L ++ARL + IK + Sbjct: 251 VTISDLVADIRALTPTEAAELVVPCYDQLTDALEKIKARLIQSLYNKIKTDRSRLLRAEH 310 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + LD + L + + + NR++S + +Q+ Sbjct: 311 SFPFKRPFDRIHRLQQVLDENMQRLVMLCGHTLKMEKEQLKGLANRLESVSPLKVLQRGY 370 Query: 371 QHILEKQQHI 380 Q I Sbjct: 371 SITTVLQNDI 380 Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 52/131 (39%), Gaps = 3/131 (2%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + Q + + + + A ++ +RI L + + + R+ + Sbjct: 283 LEKIKARLIQSL--YNKIKTDRSRLLRAEHSFPFKRPFDRIHRLQQVLDENMQRLVMLCG 340 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DTNNNFITQKRNLATKTRILINFFD 491 H +K + L+S + L+RGY+ N+ + + L++ T++ +D Sbjct: 341 HTLKMEKEQLKGLANRLESVSPLKVLQRGYSITTVLQNDIPVKSCKELSSGTKVRTRLYD 400 Query: 492 GQANAIVINKA 502 G + +I Sbjct: 401 GSFVSSIIEIE 411 >gi|225164421|ref|ZP_03726681.1| Exodeoxyribonuclease VII [Opitutaceae bacterium TAV2] gi|224800973|gb|EEG19309.1| Exodeoxyribonuclease VII [Opitutaceae bacterium TAV2] Length = 446 Score = 303 bits (775), Expect = 7e-80, Method: Composition-based stats. Identities = 127/502 (25%), Positives = 226/502 (45%), Gaps = 83/502 (16%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SV+E + +K ++ES L VRGE+S R +SGH YFSLKD +++ A++++G + Sbjct: 23 SVTEFTRRVKVLLESQLHADWVRGEVSNLRIQ-ASGHVYFSLKDAGAQLSAVMFRGDAAR 81 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 +G++ +V G+++ + +YQ+I+ ++ G G L E K+KL EGLF+ Sbjct: 82 QAVALRDGMQVVVFGQVSVYEARGQYQLIVRLVVEDGVGRLQREFEALKRKLAAEGLFAS 141 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194 + K P+P +P+ + ITSPTGA ++D + ++ R RV++ P +VQG+ ++ + Sbjct: 142 ERKRPVPALPRTVGFITSPTGAAVQDFCRILTRRGWRGRVVVLPARVQGEGAAADMIAML 201 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + L D++++ RGGGSIEDLW FN+E +VRA+A +P++SA+GHE D+T Sbjct: 202 EEAARLGM------FDLLVIGRGGGSIEDLWAFNEEGLVRAVAACPVPVVSAVGHEIDFT 255 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D+AAD+RA TP+GAAE+ Sbjct: 256 LCDFAADVRAETPSGAAELISSGFV----------------------------------- 280 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 R R +L L L + R +H R++ +++ + Sbjct: 281 --------RERERFQQLAEGLRRELVTAVGEASRRLDHARARLRLLAPSAQVERGFLRLD 332 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + ++ + Q +R ++++ L E + Sbjct: 333 DLGNRLQASLTQSVRA----RRQRFTELRAAFR--------------------ERSPETR 368 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRN---LATKTRILINFF 490 ++ + + LQ+ + ++ L RG+ ++D + ++ L R+ F Sbjct: 369 VQIESHRLLGLWKRLQAASPESVLNRGFVILRDEATGQPVQRRAELAKLKAGARLRAQFA 428 Query: 491 DGQANAIVINKAPPKEQPTKKC 512 DG+A AP K Sbjct: 429 DGEAELS----APSARTTKPKG 446 >gi|258591117|emb|CBE67412.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) [NC10 bacterium 'Dutch sediment'] Length = 413 Score = 302 bits (774), Expect = 8e-80, Method: Composition-based stats. Identities = 133/370 (35%), Positives = 210/370 (56%), Gaps = 10/370 (2%) Query: 13 PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 Y+VS+L+ ++ +E + + + V GE+S + HSSGH YFSLKD S+I ++++ Sbjct: 8 KIYTVSDLTTEIRATLEGSFAGIWVEGELSNF-HRHSSGHMYFSLKDEGSQIRVVMFRTA 66 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ F P++G+ LV G+++ + +YQ++ E + P G G L A E+ K++L EGL Sbjct: 67 NRQLRFQPKDGLVLLVYGELSVYERRGEYQLVAEYMEPKGLGALQLAFEQLKQRLQAEGL 126 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191 F D K PIP +P+ I V+TSPTGA +RDIL + RF + V+I PV VQGD+ EI Sbjct: 127 FDDARKRPIPLLPRRIGVVTSPTGAAVRDILHVLRRRFAGVDVLICPVAVQGDQAAPEIV 186 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ +LN D++I+ARGGGSIEDL FN+E + RAIA S IP+ISAIGHE Sbjct: 187 EALGELNRR------GGLDVVIVARGGGSIEDLQAFNEESVARAIAASRIPVISAIGHEI 240 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+ ADLRAPTP+ AAE+ + ++ L L +L +R+ +I + ++ L Sbjct: 241 DYTIADFVADLRAPTPSAAAELVIARQDELLQRLDDLGSRMAGVIRSRLHGLGVRISGLE 300 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + L N + + R L + L + + + + ++ + + + + Sbjct: 301 RHLRLLNPIEQIRMQRRSLTERWKALTALADRRLTMLHGELKAAVGKLDALSPLAILHRG 360 Query: 370 RQHILEKQQH 379 L H Sbjct: 361 YSICLRLPDH 370 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 15/169 (8%), Positives = 46/169 (27%), Gaps = 6/169 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ-----HLRYIFLEKKEK 398 + +++ + E Q ++ + + R L + Sbjct: 238 HEIDYTIADFVADLRAPTPSAAAELVIARQDELLQRLDDLGSRMAGVIRSRLHGLGVRIS 297 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 H+ +I + + + + ++ H + L + + L Sbjct: 298 GLERHLRLLNPIEQIRMQRRSLTERWKALTALADRRLTMLHGELKAAVGKLDALSPLAIL 357 Query: 459 KRGYTS-IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 RGY+ ++ ++ + + + + G+ V P Sbjct: 358 HRGYSICLRLPDHEIVKDSSTVVAGDLVEVRLHRGRLRCDVREVQAPTP 406 >gi|332799349|ref|YP_004460848.1| Exodeoxyribonuclease 7 large subunit [Tepidanaerobacter sp. Re1] gi|332697084|gb|AEE91541.1| Exodeoxyribonuclease 7 large subunit [Tepidanaerobacter sp. Re1] Length = 405 Score = 302 bits (773), Expect = 9e-80, Method: Composition-based stats. Identities = 149/361 (41%), Positives = 224/361 (62%), Gaps = 12/361 (3%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P +VSE++ +K++ ++N L HV ++GEIS ++ H SGH YF+LKD S+I ++++ Sbjct: 3 PVLTVSEVTNIIKYLFDNNEILRHVYIKGEISNFKH-HISGHMYFTLKDEKSQIRCVMFR 61 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + F+PE G+ + +G I+ F S +YQ+ IE L P G G L A EK K++L +E Sbjct: 62 NNNILLPFMPENGMRVVALGFISIFAKSGEYQLYIEDLQPDGIGALHIAFEKLKERLDKE 121 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189 GLF Q K PIPF+PK I +ITS TGA IRD+L I RF + +II PV VQG + +E Sbjct: 122 GLFELQRKQPIPFLPKKIGIITSLTGAAIRDLLTVIKRRFSNVDIIIAPVLVQGRDAAEE 181 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I +AIL+LN L D+II+ RGGGSIE+LW FN+E + RAIANS IP+ISA+GH Sbjct: 182 ICSAILELNRL------KNIDVIIVGRGGGSIEELWAFNEEKVARAIANSLIPVISAVGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+T++D+ AD RAPTP+ A E+AVP K LQ+ + + RL N I+ I + L Sbjct: 236 ETDYTISDFVADKRAPTPSAAGEIAVPEKRVLQNEIRYISLRLINGILSYIGARRQKLEY 295 Query: 310 LLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + + + +D+ + L+ ++++ I + NH I R+++ + ++ Sbjct: 296 LKRAPIFKRPETYIINCSLIIDQTSKRLQKDIDLYISKNKSILNHYIARLEALNPLSILK 355 Query: 368 K 368 + Sbjct: 356 R 356 Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 3/115 (2%) Query: 395 KKEKIAILHM--LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 +++K+ L + ++ + I I + R++ + I + ++ L++ Sbjct: 289 RRQKLEYLKRAPIFKRPETYIINCSLIIDQTSKRLQKDIDLYISKNKSILNHYIARLEAL 348 Query: 453 AYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 + LKRGY+ + N I ++ ++I G+ V + + Sbjct: 349 NPLSILKRGYSICMSADTNKIIKHPEDVKKGDSVVILLSGGRLLCSVEDSKRKGD 403 >gi|313890757|ref|ZP_07824382.1| exodeoxyribonuclease VII, large subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313120858|gb|EFR43972.1| exodeoxyribonuclease VII, large subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 447 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 141/494 (28%), Positives = 233/494 (47%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS+L+ +LK + + L V + G++S +R + H YFSLKD + I A IW G Sbjct: 5 LSVSQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATIWGGI 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ ++G++ + S Y IIIE + P G G L E+ K KL +EG Sbjct: 63 YKKLGFDLEEGMKVNIVGRVQLYEPSGSYSIIIEKVEPDGVGALALQFEQLKAKLSKEGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+D HK +P + I V+TSP+GAVI+DI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FNDNHKQALPQFSRKIGVVTSPSGAVIKDIITTVSRRFPGVDILLFPTKVQGNGAAEEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N + D++I+ RGGGSIEDLW FN+E++V+AI S +PIIS++GHET Sbjct: 183 ANIALANQRTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESHLPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A PV + S I+ + + + + L Sbjct: 237 DITLADFVADRRAATPTAAAELATPVTKADIISWISEQQNRAYQANLRLLKQKGDRLAKL 296 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ ++DRL +L + + + + +R++S ++ + + Sbjct: 297 SQSVIFRQPERLYDGFLQKIDRLQSQLTYQAKQKLSESQHLEVSLRHRLQSLDIVTKLSR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + Q ++ +++ + Sbjct: 357 YQEKMNYINQRLQINMQKRYDHAL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L + + + RGY ++ + I+ ++A + + Sbjct: 381 -----------ARFEKAQDTLLALDTERIIARGYGILR-KDEEVISSVTSIAVGDALDLE 428 Query: 489 FFDGQANAIVINKA 502 DGQ V N Sbjct: 429 LQDGQIEVEVKNVK 442 >gi|125717529|ref|YP_001034662.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK36] gi|158513224|sp|A3CLQ7|EX7L_STRSV RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|125497446|gb|ABN44112.1| Exodeoxyribonuclease VII large subunit, putative [Streptococcus sanguinis SK36] Length = 446 Score = 302 bits (773), Expect = 1e-79, Method: Composition-based stats. Identities = 157/500 (31%), Positives = 233/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERS------VLDVLIIGRGGGSIEDLWAFNEEKTVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADHRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q ++ + ++ + + + + Sbjct: 354 VQHLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N I + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVIESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|302877904|ref|YP_003846468.1| exodeoxyribonuclease VII, large subunit [Gallionella capsiferriformans ES-2] gi|302580693|gb|ADL54704.1| exodeoxyribonuclease VII, large subunit [Gallionella capsiferriformans ES-2] Length = 447 Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 127/488 (26%), Positives = 220/488 (45%), Gaps = 57/488 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 VSEL+ + ++E N+ + VRGEIS +SGH YF+LKD +++ ++++ Sbjct: 13 VLQVSELTRAINQLLEGNVPALWVRGEISNLV-KAASGHWYFALKDEQAQVRCVMFRHKN 71 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ G + ++ + + +Q+ +E L P+G G L + K+KL +EGLF Sbjct: 72 QSLDSTIANGSQVELLAVASLYEARGDFQLTVEQLRPAGLGVLYEQFARLKQKLEDEGLF 131 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P P+ + +ITSP A +RD+L + R P + VI++P VQG ++IA+ Sbjct: 132 DATCKRALPAFPRRVGIITSPQAAALRDVLTTLKRRLPGVPVILYPTPVQGAGSAEKIAD 191 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI E ++IL RGGGSIEDLW FN+E++ RAI S+IPI+S +GHETD Sbjct: 192 AIQTACERNE------CSVLILCRGGGSIEDLWSFNEEVVARAIFASAIPIVSGVGHETD 245 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ AD RAPTPT AA+ AVP +E L L + L ++ + L+ L + Sbjct: 246 FTIADFVADERAPTPTAAAQRAVPDRETLLKGLRDTAQHLLRSQRNRLQNAMQALDYLQR 305 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + + L LD++ + L+ N + ++ +R++ + ++ + Sbjct: 306 RVVHPAEQLKQKSTVLDQMQQRLQRNFSHGLQQEQWRCKSYTHRLRGA--GSDFRRMQDK 363 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 ++ + + Q ++ + L +L + ++ ++ R+ Sbjct: 364 LVHQSARLVQAMQTGQSRKQVRLATAGQHLGLL--NPAQVLARGYSLVQHSDGRLVCA-- 419 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 LAT + I F G Sbjct: 420 -------------------------------------------AEQLATGDTLRITFASG 436 Query: 493 QANAIVIN 500 A V Sbjct: 437 WATTEVTE 444 >gi|220929323|ref|YP_002506232.1| exodeoxyribonuclease VII large subunit [Clostridium cellulolyticum H10] gi|254783696|sp|B8I3A9|EX7L_CLOCE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|219999651|gb|ACL76252.1| exodeoxyribonuclease VII, large subunit [Clostridium cellulolyticum H10] Length = 404 Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 131/369 (35%), Positives = 214/369 (57%), Gaps = 12/369 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSVS+++ ++K +V ++ LS V +RGEIS ++ H +GH YF++KD +S + ++++ Sbjct: 4 VYSVSDINNYIKQLVSNDIILSDVSIRGEISNFKH-HYTGHMYFTIKDKNSLLKCVMFRS 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F PE G++ +V G I+ F +YQ+ S+ P G G L A E+ K+KL EG Sbjct: 63 QAVSLRFSPENGMKVIVSGYISVFERDGQYQLYASSMQPDGVGALHIAFEQLKEKLQREG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF ++K IP +P I V+TS TGAVIRDI+ R ++++++PV VQG + +I Sbjct: 123 LFDPENKKKIPVLPGSIGVVTSSTGAVIRDIINVTYRRNSKMKLVLYPVAVQGQQAAGQI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI LN + D+II+ARGGGS+E+LW FN+E++ R+I S+IP+ISA+GHE Sbjct: 183 AEAIKCLN------EQNKVDVIIVARGGGSLEELWAFNEEIVARSIYASNIPVISAVGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN-- 308 TD+T+ D+ +D+RAPTP+ AAE+AVP E L L + R+ + + + + N L Sbjct: 237 TDFTICDFVSDMRAPTPSAAAELAVPDMEVLLYKLESYNMRMKSSLAKKVTTLKNQLQKL 296 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ R LD L + + + II K F + ++ + + +++ Sbjct: 297 NARPFFAQPYDRVNQQRQTLDNLTKSMVRENQTIIKDKKSQFGMLAGKLDALSPLKILER 356 Query: 369 NRQHILEKQ 377 + Q Sbjct: 357 GYSLVKNPQ 365 Score = 98.3 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 40/114 (35%) Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 L+ + + Q +R+ + L + IK + + L + Sbjct: 288 TLKNQLQKLNARPFFAQPYDRVNQQRQTLDNLTKSMVRENQTIIKDKKSQFGMLAGKLDA 347 Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + L+RGY+ +++ + + + ++ I DG A VI+ K Sbjct: 348 LSPLKILERGYSLVKNPQGYVVNNVKQINIGDKLEILMNDGLAECDVISVREGK 401 >gi|242278212|ref|YP_002990341.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio salexigens DSM 2638] gi|242121106|gb|ACS78802.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio salexigens DSM 2638] Length = 459 Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 121/513 (23%), Positives = 213/513 (41%), Gaps = 79/513 (15%) Query: 13 PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +SV++++ +K ++E+ + VRG+++ +SGH YF+L D + + + +KG Sbjct: 2 KIFSVTDITRAVKDVLETEFPFIWVRGQVTNL-ARPASGHIYFTLTDGDAGLSVVWFKG- 59 Query: 73 LNKI--------------------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 ++ E+G+E L G + +P YQ++ E + G Sbjct: 60 NQRMGGADGEDSINPLTGEIESGGPLELEDGMEILCAGHMNVYPPRGVYQLVAELVQEQG 119 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-P 171 G L A E K+KL E+G F D K IP PK +AV+T+PTGA +RD L+ R Sbjct: 120 VGDLKLAFEAMKRKLAEKGYFDDDRKMEIPRSPKRVAVVTAPTGAAVRDFLKIAETRGTG 179 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 + I+P VQGD P +IA A+ + ++++L RGGGS+EDLW FN E Sbjct: 180 AEIRIYPTLVQGDLAPGQIAQALDTVYDDGWA------EVVVLIRGGGSLEDLWAFNTEQ 233 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + A+ +++P++ +GHE D ++ADY AD R TP+ AA+ P +E L ++ L+ Sbjct: 234 VADALFRATVPVVCGVGHEVDVSIADYVADKRVATPSHAAQELWPRRETLMQTVDELDGS 293 Query: 292 LNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 L + + + L +L K L + Q + L+ + K Sbjct: 294 LVRSFDNFLNVRESRLETLQKGLSWLSPAQRIERLLTSFAEEADRLDRAAGKFVSAKSDT 353 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + +R+ F I++ Q + + Sbjct: 354 VSALSHRLSFAFGEERIERMENDFSGLQNRLSRAADMF---------------------- 391 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DT 468 L K+ L+ ++ L+RGY+ + + Sbjct: 392 ---------------------LKDKLAEYEN----AATSLRMLDPESPLERGYSLVTVEK 426 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + F+ +A I + G+ A V ++ Sbjct: 427 SGTFLRSPDEVADGDAIRVRVKSGEVRARVTSE 459 >gi|89901921|ref|YP_524392.1| exodeoxyribonuclease VII large subunit [Rhodoferax ferrireducens T118] gi|89346658|gb|ABD70861.1| Exodeoxyribonuclease VII large subunit [Rhodoferax ferrireducens T118] Length = 472 Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 120/513 (23%), Positives = 204/513 (39%), Gaps = 89/513 (17%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + ++ + + L + ++S + V VRGE+SG+ SSGH YFSLKD +++ Sbjct: 28 TDNPAMTPRVWQIGALCRAIAAALDSRFNPVVVRGELSGF-SRASSGHCYFSLKDESAQV 86 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +++ + ++F P +G V G++ + Q+I+ES+ +G G L + K Sbjct: 87 RCAMFRRAASSLDFSPRDGELVEVRGRLGVYEPRGDLQLIVESMSRAGQGALFEQFLQLK 146 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQG 183 KL +GLF+ + K +P +P+ I V+TS A + D++ + R + V+I P VQG Sbjct: 147 AKLEAQGLFAAERKRQLPVLPRGIGVVTSLGAAALHDVVTTLQRRVSHIPVVIAPATVQG 206 Query: 184 DECPKEIANAILQLNTLKEGR-----------------TCPRPDIIILARGGGSIEDLWH 226 P E+ A+L L L + P D+I+L RGGGS+EDLW Sbjct: 207 SNAPGELIQALLNLYRLTQEGRGLEPDFTKKTKKKGESAAPCIDVILLVRGGGSMEDLWA 266 Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 FNDE + +A S +PI+ +GHETD+T+AD+ ADLRAPTPT AAE+ ++ +L Sbjct: 267 FNDEQLAHTLAQSPVPIVCGVGHETDFTIADFVADLRAPTPTAAAELVAQPRQLWLGALD 326 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 RL + ++R + + L+ L Sbjct: 327 AAARRLQDAVLRRLDQQSQRLDLTTSRLGRPSAL-------------------------- 360 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + Q ++ ++ + A L Sbjct: 361 -------------------VGRQGLRLGASAQRLQLASTHFVQQRQQALLRQQAALPTAA 401 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 ++ R R++ L L RGY + Sbjct: 402 QRGLQRQD----------ERLQRAALR---------------LGLLDPHLVLARGYAWLS 436 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + I+ + + DG + V Sbjct: 437 TPDGVGISSVQQTWPGQAVRATLADGAVDLTVT 469 >gi|116328175|ref|YP_797895.1| exodeoxyribonuclease VII large subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330899|ref|YP_800617.1| exodeoxyribonuclease VII large subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281348|sp|Q04TB1|EX7L_LEPBJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|122284034|sp|Q051N3|EX7L_LEPBL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|116120919|gb|ABJ78962.1| Exodeoxyribonuclease VII, large subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124588|gb|ABJ75859.1| Exodeoxyribonuclease VII, large subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 422 Score = 301 bits (771), Expect = 2e-79, Method: Composition-based stats. Identities = 138/495 (27%), Positives = 210/495 (42%), Gaps = 79/495 (15%) Query: 11 DHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 D +VSE++ LK+++ +L ++ VRGEIS Y SSGH YFSLKD+ S + Sbjct: 3 DSKPLTVSEVTRILKNLITGSKDLKNIWVRGEISNY-SKASSGHIYFSLKDSSSLMRCTF 61 Query: 69 WKGTLNKIEFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 + + P +G E V G +T + Y + + + G G +L +EK K+KL Sbjct: 62 FNYSNKNYSGKPLSDGKEVQVYGTVTLYEAGGSYNLNVARVEELGQGDILLQIEKLKQKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EG+F + K IP PK + + TSP+GA I DI++ RFP + ++I P VQGDE Sbjct: 122 AAEGIFDPERKRRIPSFPKTLGIATSPSGAAIEDIIKIARSRFPGINILISPCFVQGDEA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P I AI +LN D+II RGGGS EDL FNDE +VRA ANS IPIISA Sbjct: 182 PDSIVAAIEELN-----HPSWGVDVIIAGRGGGSFEDLMAFNDEKVVRAYANSRIPIISA 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GH+TD L+D+AAD PTPT AAE AVP +E + Sbjct: 237 VGHQTDVLLSDFAADYSTPTPTAAAEYAVPKEEDVL------------------------ 272 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L +L L+ +L I + + + + Sbjct: 273 -------------------QFLTQLEGRLKTSLLAKISSSKDRLRLLSGKFIFKEPMQLL 313 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q + E +++ V N++ +++ Sbjct: 314 NQRNQRVDEIGVRLQKAVF-------------------------NKVGLARVRLERYED- 347 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + T ++ + T+KRGY+ +++ I + + Sbjct: 348 LTSRMRNIFFHKKQKAEFWTTKVEDLSPPATMKRGYSILRNQKGKIIRSPEETKPEEELQ 407 Query: 487 INFFDGQANAIVINK 501 + G I K Sbjct: 408 VLLSGGTMQVIRKGK 422 >gi|331703118|ref|YP_004399805.1| Exonuclease VII, large subunit [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801673|emb|CBW53826.1| Exonuclease VII, large subunit [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 469 Score = 301 bits (771), Expect = 2e-79, Method: Composition-based stats. Identities = 127/495 (25%), Positives = 219/495 (44%), Gaps = 35/495 (7%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +V EL+ LK ++E+ + V+GE+S SGH YFS+K+ + I+ ++W Sbjct: 2 EKILTVQELNEALKILIENKQEFKDIYVQGELSNLTFN-KSGHIYFSIKEQDAAINCMMW 60 Query: 70 KGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 K KI E+G++ + G++T + + + + + G G L E+R K+L Sbjct: 61 KTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIKIYGIGDLQKIFEQRYKELE 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 ++G F K PIP K + +IT+ +GA I D+++ I R P + + +FP +VQGD+ Sbjct: 121 QKGWFDPNLKKPIPEFVKNVGIITADSGAAIYDLIRTIHRRLPLINIYLFPAQVQGDKAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 K+IA+ I Q N + D++I+ RGGGS EDLW FN+ +++AI NS IPIISA+ Sbjct: 181 KDIASKIKQANDFEVQ-----LDVLIVGRGGGSYEDLWAFNELEVLQAIKNSQIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE DW L+DY AD+RA TPT A E+ +++ L + +I+ + + L Sbjct: 236 GHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFNEKL 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 N+ K E ++ KY + + I Sbjct: 296 NNYKK---------------------EQTKYIKNNFSFKYLQLKQLSIDNTKWT-KNKIN 333 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + +Q I + + K L ++ N + + I+ Sbjct: 334 LLIDKLENYKQSINNSILHIINSQ---NKTLKNYLIADEQKIVNYLKKQISEFNYTISSF 390 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + ++ +K S + L S L+ GY+ + + NN I + + + + Sbjct: 391 KGHINQILKYEELSFNTLENKLNSLDPLKPLQNGYSIVTNLNNQKIRSYKQVKLNEDLKV 450 Query: 488 NFFDGQANAIVINKA 502 D + + Sbjct: 451 ILTDSKLTVTIKEVK 465 >gi|313664986|ref|YP_004046857.1| exodeoxyribonuclease VII, large subunit [Mycoplasma leachii PG50] gi|312950070|gb|ADR24666.1| exodeoxyribonuclease VII, large subunit [Mycoplasma leachii PG50] Length = 468 Score = 301 bits (771), Expect = 2e-79, Method: Composition-based stats. Identities = 131/494 (26%), Positives = 228/494 (46%), Gaps = 37/494 (7%) Query: 14 EYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SV +L+ LK +E ++ V+GE+S SGH YFS+KD ++ I+ ++WK Sbjct: 4 ILSVQQLNESLKTFIEEPDYFKNIYVKGELSNLTFN-KSGHVYFSIKDQNAAINCMMWKS 62 Query: 72 TLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 K+ E+G++ + G++T + + + ++ + G G L E+R K L + Sbjct: 63 NTQKLESLNLEDGVQIICHGRLTYYIPTGRVSFEVKDIQIYGIGDLQKIYEQRYKDLKQA 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G F K P+P K + +IT+ +GA I D++ I R P + + +FP +VQG + + Sbjct: 123 GWFDQSLKKPLPEFIKNVGIITASSGAAIHDLITTIHRRLPLINIYLFPAQVQGAQSEID 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IAN I Q N K + D++I+ RGGGS EDLW FN+ ++++AI +S IPIISA+GH Sbjct: 183 IANKIKQANDFKV-----KLDVLIVGRGGGSYEDLWAFNELVLLQAIKDSKIPIISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-LN 308 E D L+D+ AD+RA TPT A E+ +++ L + +I +K +N Sbjct: 238 EPDVVLSDFVADIRAATPTAAGELVSKDINEIKNRLKHYYQTSKTLIWNKLKLTNQELIN 297 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + LS L +L + ++ I LI + Sbjct: 298 FKENQIKFINNYLSNQYLELKQLSIYNPNLVKNKIT----------------SLIDKLDD 341 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 N+ + E + I I L+ KE + L + +++ + + T I+ + Sbjct: 342 NKHFVFESIKKI----------IILQNKEINSYLSINKQKISDYLKKQITDFNFAISSFK 391 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++S KIK S + + LK G++ I + N+ IT + + + + Sbjct: 392 GLISQKIKFEELSFISLEKQVNLLNPLKPLKNGFSIITNLNDQKITSYKQVKINEDLKVF 451 Query: 489 FFDGQANAIVINKA 502 D + + Sbjct: 452 LSDSKLVVTIKEVK 465 >gi|182413595|ref|YP_001818661.1| exodeoxyribonuclease VII, large subunit [Opitutus terrae PB90-1] gi|177840809|gb|ACB75061.1| exodeoxyribonuclease VII, large subunit [Opitutus terrae PB90-1] Length = 428 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 123/483 (25%), Positives = 218/483 (45%), Gaps = 75/483 (15%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVSE + +K ++E L VRGE+S R +SGH YF LKD + ++A++++ + Sbjct: 18 SVSEFTRRVKTLLERGLRPGWVRGEVSNLRAQ-ASGHVYFCLKDAGAAMNAVLFRADAAR 76 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 +G++ +V G+++ + +YQ I+ ++I G G L E K++L EGLF Sbjct: 77 QTVKLRDGLQIVVYGEVSVYEARGQYQFIVRAVIEDGEGRLRREFEALKQRLATEGLFDP 136 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194 K P+P +P I ITSPTGA ++D L+ + R RV++ P KVQGD E+ + Sbjct: 137 AKKRPLPEMPATIGFITSPTGAAVQDFLRILKRRGWRGRVVVLPAKVQGDGAAAEMIAML 196 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + D++++ RGGGS+EDLW FN+E +VRA+A S++PI+SA+GHE D++ Sbjct: 197 EL------AQKHGLFDLLVIGRGGGSLEDLWAFNEEPLVRAVAASTVPIVSAVGHEIDFS 250 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D+AAD+RA TP+ AAE+ Sbjct: 251 LCDFAADVRAETPSAAAELISSHFVA---------------------------------- 276 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + R + E + R +H +R++ I++ + Sbjct: 277 ---------AAQRALGASEAMLSAGEAALERAGARLDHARSRLRLLSPTAQIEQGYLRLD 327 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + +++++ +E A +++ + R+ + L R Sbjct: 328 DFANRLAAALRENVDGCRQRLRE--ARSLLVQRSPELRVQIESHRLLALWKR-------- 377 Query: 435 IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 LQ+ + + L+RG+ ++D + +K ++ +++ F DGQ Sbjct: 378 --------------LQAVSPTSVLQRGFVIMRDEQGRPVPRKGGVSAGQKLVAEFGDGQL 423 Query: 495 NAI 497 Sbjct: 424 PVR 426 >gi|323352719|ref|ZP_08087689.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis VMC66] gi|322121755|gb|EFX93501.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis VMC66] Length = 446 Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats. Identities = 153/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEKTVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A V + L L E ++ + + Y L Sbjct: 234 HETDTTLADFVADHRAATPTAAAELATLVTKLDLLGHLQQQENHMSRAMSNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|52841062|ref|YP_094861.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54296847|ref|YP_123216.1| exodeoxyribonuclease VII large subunit [Legionella pneumophila str. Paris] gi|81822622|sp|Q5X6S7|EX7L_LEGPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|81823449|sp|Q5ZXA6|EX7L_LEGPH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|52628173|gb|AAU26914.1| exonuclease VII, large subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53750632|emb|CAH12039.1| Exonuclease VII, large subunit [Legionella pneumophila str. Paris] Length = 443 Score = 300 bits (769), Expect = 3e-79, Method: Composition-based stats. Identities = 147/496 (29%), Positives = 233/496 (46%), Gaps = 57/496 (11%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S P +VS+L+ +K +E+ + V V GEIS SSGH YF+LKD+ ++I Sbjct: 2 SSQLPILTVSQLNRQVKGFLENEIGLVHVEGEISNL-SKPSSGHYYFTLKDSTAQIRCAF 60 Query: 69 WKGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +K + + +G + + GK++ + +YQ+I+E ++ +G G L E+ K KL Sbjct: 61 FKNRHSNSLLRNFNDGQQIVATGKLSLYEARGEYQLIVEEIVKAGMGILYQRFEELKIKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGLF+ + K P+P IP+ I +ITSPTGA I+DIL ++ RFP+ R+II+P +VQG Sbjct: 121 ASEGLFNPERKKPLPRIPETIGIITSPTGAAIQDILSTLARRFPIARIIIYPSEVQGQTA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P+++ A+ N R ++ILARGGGSIEDLW FNDE + R IA S IP++S Sbjct: 181 PQQLVKALKLANA------HKRCQVLILARGGGSIEDLWAFNDEYLARQIAISEIPVVSG 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHETD+T+AD+ AD RA TPT AA P L + L RL++ IIRL+K Sbjct: 235 IGHETDFTIADFVADYRAETPTAAATAVTPNCIELFNILDTAIYRLHDAIIRLVKGLQLK 294 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LN L+ + + QT+S LD L R+L + I N +++++ I Sbjct: 295 LNHLIDKIASPRQTISTYWQTLDYLERQLISAMTQFINLNINKVNIFSTQLQANNPKTQI 354 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + + + + Q ++ + + + ++ LH + + + + K Sbjct: 355 ERTKTQLRQLIMQLNQEIRIQVNQLKNQLSTNLSTLHAV--SPLATLDRGYAIVSKNQRI 412 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + +I I Sbjct: 413 LFAAQQAQI----------------------------------------------GDTID 426 Query: 487 INFFDGQANAIVINKA 502 + G V Sbjct: 427 VRLAKGSLACEVTQIK 442 >gi|319938729|ref|ZP_08013093.1| exodeoxyribonuclease 7 large subunit [Streptococcus anginosus 1_2_62CV] gi|319811779|gb|EFW08045.1| exodeoxyribonuclease 7 large subunit [Streptococcus anginosus 1_2_62CV] Length = 446 Score = 300 bits (769), Expect = 3e-79, Method: Composition-based stats. Identities = 153/497 (30%), Positives = 235/497 (47%), Gaps = 62/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A IW G Sbjct: 5 LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATIWGGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL EEGL Sbjct: 63 YKKLGFDLEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGEEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + +I++P KVQG+ E+A Sbjct: 123 FEERFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIILYPTKVQGEGASAEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 ENIRRANER------NDLDVLIIGRGGGSIEDLWAFNEEVVVRAIFESHIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV + L + L + RL + + Y L L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKLDLLAHLQQQQNRLAAAMSNRLTYNRERLAKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LD+L L+ + + + + +R+++ + +Q Sbjct: 297 SQSVIFRQPERLYDSYLQKLDQLNLRLKQKIREYYNEEVQRARLLQHRLEALAPLRQVQI 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + + ++ + + + E K Sbjct: 357 YQERVAQLERLLRSNMAVVYDHKVAEVKR------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + L + RGY ++ + + + K ++ I Sbjct: 386 ----------------LSDALLMLDTSRIVARGYAIVK-KDEQVLESIEKVNKKDQLTIL 428 Query: 489 FFDGQANAIVINKAPPK 505 DGQ V + + Sbjct: 429 MRDGQIEVEVKDVERKE 445 >gi|320106488|ref|YP_004182078.1| exodeoxyribonuclease VII large subunit [Terriglobus saanensis SP1PR4] gi|319925009|gb|ADV82084.1| exodeoxyribonuclease VII, large subunit [Terriglobus saanensis SP1PR4] Length = 504 Score = 300 bits (769), Expect = 3e-79, Method: Composition-based stats. Identities = 135/500 (27%), Positives = 221/500 (44%), Gaps = 55/500 (11%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + ++V L L+ VE + S V GEIS R SGH YF+LKD +++ Sbjct: 54 DPPKKERKVWTVRSLVADLRGHVEKDYSDEWVEGEISNCRSAP-SGHFYFTLKDGDAQLP 112 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++++ + + PE+G LV G ++ + + Q+I E+L P G G L A E+ ++ Sbjct: 113 VVLFRRQAMLLRWKPEDGQSVLVRGSVSVYESRGQLQLIAETLEPRGEGALRLAYEQLRQ 172 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184 KLL EGLF + K +P PK I VITS GAV+RDI R L ++I+P +QG Sbjct: 173 KLLAEGLFDAERKRALPRFPKTIGVITSTAGAVLRDIANISKRRHACLNLLIYPALMQGA 232 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E E+ AI N P+ D+I++ARGGGS EDLW FN+E + RAIA S +P++ Sbjct: 233 ESADEVRAAIAYFN----SEAAPKVDLILIARGGGSTEDLWGFNNEALARAIAASGLPVV 288 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHETD+T+AD+ ADLRAPTP+ AAE+ + + + LE RL + + Sbjct: 289 SAIGHETDFTIADFVADLRAPTPSAAAELITEHQHRVGEQVDMLETRLERAMRYQQMHAR 348 Query: 305 NTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L A+ + + +D L E+ + ++ R + +R+ Sbjct: 349 QSFARLNSAIAVSRVRDAVERRQQHVDALRFRAENAMSTLLQRHNVLLTGVQHRLARQDA 408 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + +R+ +Q + + L+ + + + + A L L ++ + + + Sbjct: 409 GRRVDADRRLFTLLEQRLGASMIAPLQQMRMHLRTEDARLRAL--SPESVLRRGYALVFD 466 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 R+ + + Sbjct: 467 AKGRL---------------------------------------------LRNAAEVQDG 481 Query: 483 TRILINFFDGQANAIVINKA 502 I+ G+ A V + Sbjct: 482 DAIVARLASGEIKARVTDDE 501 >gi|257784445|ref|YP_003179662.1| exodeoxyribonuclease VII, large subunit [Atopobium parvulum DSM 20469] gi|257472952|gb|ACV51071.1| exodeoxyribonuclease VII, large subunit [Atopobium parvulum DSM 20469] Length = 449 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 125/491 (25%), Positives = 197/491 (40%), Gaps = 56/491 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS+ K+ V +++ + V GE+SG+RG + SGH YF +KD S + I+W Sbjct: 11 VLSVSDAVLFAKNEV-ASMPSMTVVGEVSGFRGPNYKSGHCYFDVKDPVSSMSVIVWSKI 69 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++G++ + GK + S K ++ +G G L + + KKL +EGL Sbjct: 70 YAASGITLQDGMKIQMKGKFDIYASSGKLSFHARTIQIAGEGDLRQKVAQLAKKLEKEGL 129 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 K IP I V+TS +G+VI D+ + ++ R P + + + VQG P I Sbjct: 130 TDISRKRSIPEFCTRIGVVTSLSGSVIDDVKRTLARRNPLVELEVSGCAVQGTHAPATII 189 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ RPD I+L RGGGS EDL FNDE + RAIA IP+I+ IGHE Sbjct: 190 RALQVA-------ATTRPDAILLVRGGGSFEDLMCFNDEGVARAIAACPIPVITGIGHEP 242 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T+AD +D R TPT AAE P ++ L+ NN I RL L Sbjct: 243 DTTIADMVSDRRTSTPTAAAESVAP-------AISELQTTFNNRISRLGNATRKILQFYK 295 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L +Q ++ ++ K + + +R I+ I + Sbjct: 296 TGLITVEQR--------------SNLAMKNVLSSKKYQLDKLSDRPCLKDPIYIISTRTE 341 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + +Q + + + R+ Sbjct: 342 DLNQTEQRLMDAFP-------------------------ALLSRKKEMLFVESQRLTRAS 376 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + +S L + + L RGY +QD + I + + +L+ D Sbjct: 377 AAMFHPHQALLSSLAGRLDALSPLKVLTRGYAYVQDERGSVIKTAKEASVGDSLLVKMRD 436 Query: 492 GQANAIVINKA 502 G A V + Sbjct: 437 GTIKATVSDIE 447 >gi|297616621|ref|YP_003701780.1| exodeoxyribonuclease VII large subunit [Syntrophothermus lipocalidus DSM 12680] gi|297144458|gb|ADI01215.1| exodeoxyribonuclease VII, large subunit [Syntrophothermus lipocalidus DSM 12680] Length = 410 Score = 300 bits (768), Expect = 4e-79, Method: Composition-based stats. Identities = 132/360 (36%), Positives = 205/360 (56%), Gaps = 11/360 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +VSEL+ ++K ++E++ L+ + V+GEIS ++ SGH+YFSLKD + I ++++ Sbjct: 6 ILTVSELTMYIKSLLENDMVLASIWVKGEISDFKYYQKSGHSYFSLKDEGAVISCVMFRS 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F+PE G++ + +G ++ F S +YQ+ +E L P G G L L + +++L +EG Sbjct: 66 RARSLRFVPENGMKVIALGYVSVFERSGRYQLYVEDLEPDGIGALYLQLLQLRQRLEKEG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LFS K P+P + V+TS GA RDIL+ I R P V++ VQG+ P+EI Sbjct: 126 LFSPDKKKPLPKFANRVGVVTSADGAAFRDILKVIRQRHPGAVVVLAHSSVQGESAPQEI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI LN E D+II+ RGGGS EDLW FN E +VRA++ SS+P+ISA+GHE Sbjct: 186 ARAIRALNEYGE------IDVIIVGRGGGSFEDLWAFNTEEVVRAVSASSVPVISAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D++L D AD+RA TPT AA++AVP E L+ L L+ R+ + R I+ K T++ Sbjct: 240 VDYSLCDLVADVRAATPTQAAQLAVPDIEALRQDLALLQRRMRRAMERNIESKWQTVDYF 299 Query: 311 --LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + D L R R+ L L + I + I R+ + + +++ Sbjct: 300 RARRIWAGPDGLLQHQRLRVGELRERLLKAAKSDIDLRRHGLESISGRLDALSPLRVLER 359 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 3/138 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I+ RQ + Q+ + + +++++ + A + + + + +L Sbjct: 267 IEALRQDLALLQRRMRRAMERNIESKWQTVDYFRAR--RIWAGPDGLLQHQRLRVGELRE 324 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTR 484 R+ I + + L + + L+RGY ++ + + Sbjct: 325 RLLKAAKSDIDLRRHGLESISGRLDALSPLRVLERGYAVVRKPEAGEVVKGVEKVRIGEL 384 Query: 485 ILINFFDGQANAIVINKA 502 + I +G+ V K Sbjct: 385 LEIILSEGRMTVEVKTKE 402 >gi|256384013|gb|ACU78583.1| exodeoxyribonuclease VII, large subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|256384845|gb|ACU79414.1| exodeoxyribonuclease VII, large subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|296455800|gb|ADH22035.1| exodeoxyribonuclease VII, large subunit [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 469 Score = 300 bits (768), Expect = 4e-79, Method: Composition-based stats. Identities = 129/496 (26%), Positives = 219/496 (44%), Gaps = 37/496 (7%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +V EL+ LK ++E+ + V+GE+S SGH YFS+K+ + I+ ++W Sbjct: 2 EKILTVQELNEALKTLIENKQEFKDIYVQGELSNLTFN-KSGHIYFSIKEQDAAINCMMW 60 Query: 70 KGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 K KI E+G++ + G++T + + + + + G G L E+R K+L Sbjct: 61 KTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIKIHGIGDLQKIFEQRYKELE 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 ++G F K PIP K + +IT+ +GA I D+++ I R P + + +FP +VQGD+ Sbjct: 121 QKGWFDPNLKKPIPEFVKNVGIITADSGAAIYDLIRTIHRRLPLINIFLFPAQVQGDKAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 K+IAN I Q N K D++I+ RGGGS EDLW FN+ +++AI NS IPIISA+ Sbjct: 181 KDIANKIKQANDFKVQ-----LDVLIVGRGGGSYEDLWAFNELEVLQAIKNSQIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE DW L+DY AD+RA TPT A E+ +++ L + +I+ + + L Sbjct: 236 GHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFDEKL 295 Query: 308 NSLLK-ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 N+ K S +L +L + + I + I + L Sbjct: 296 NNYKKEQTKYIKNNFSFKYLQLKQLSIDNTKWTKNKINLVIDKLENYKQSINNSTL---- 351 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 I + K L ++ N + + I+ Sbjct: 352 ----------------------HIINSQNKTLKNYLIADEQKILNYLKKQISEFNYTISS 389 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ +K S + L S L+ GY+ + + N+ I + + + Sbjct: 390 FKGHINQILKYEELSFNTLENKLNSLDPLKPLQNGYSIVTNLNHQKIRSYKQVKLNEDLK 449 Query: 487 INFFDGQANAIVINKA 502 + D + + Sbjct: 450 VILTDSKLTVTIKEVK 465 >gi|294788628|ref|ZP_06753870.1| exodeoxyribonuclease VII, large subunit [Simonsiella muelleri ATCC 29453] gi|294483505|gb|EFG31190.1| exodeoxyribonuclease VII, large subunit [Simonsiella muelleri ATCC 29453] Length = 405 Score = 300 bits (767), Expect = 5e-79, Method: Composition-based stats. Identities = 116/355 (32%), Positives = 189/355 (53%), Gaps = 8/355 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ + ++E+ L + + GEIS +SGH YF+LKD H+++ +++ T Sbjct: 10 LSVSELNSIARQLLENQLDGLWISGEISNLT-RAASGHYYFALKDAHAQVRCALFRQTAT 68 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ ++G + GKI+ + +YQI + + G G L EK K L EGLF Sbjct: 69 RLAIPLKDGDHIELTGKISIYEARGEYQITVNDMRTLGLGDLYVRYEKLKNTLQNEGLFD 128 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 HK +P P+ I ++TS A +RD+ + R P + +I++P VQG K+IA A Sbjct: 129 SSHKKRLPEKPRAIGIVTSLAAAALRDVASTLRRRAPHIPIIVYPTPVQGAGSEKKIAQA 188 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N E D++++ RGGGS+EDLW FN+E++ R IA S +P +S +GHETD+ Sbjct: 189 IELANKRNE------VDVLLICRGGGSMEDLWAFNEEIVARTIAASQLPTVSGVGHETDF 242 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TLAD+ AD+RAPTPT AAE+ P +E + + L +L I + + L+ L K Sbjct: 243 TLADFVADVRAPTPTAAAELVSPNQEEIIKHINQLYEKLQRSITQHYQNASQQLDFLAKQ 302 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + L+ + +L+ L N+ + H + + + +Q+ Sbjct: 303 IRHPREKLNIQKQQLENFQAALSQNMAHHFAIQQTRLQHASALLNAVAPQNVLQR 357 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 57/132 (43%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 N++ I++ + + +++ + + +++ L + ++ ++ + Sbjct: 266 NQEEIIKHINQLYEKLQRSITQHYQNASQQLDFLAKQIRHPREKLNIQKQQLENFQAALS 325 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++H T + + +L + A +N L+RG+ +Q T+ + +L T ++ + Sbjct: 326 QNMAHHFAIQQTRLQHASALLNAVAPQNVLQRGFAMVQTTHGKVVQSSGSLKTGQKLRLV 385 Query: 489 FFDGQANAIVIN 500 F DG + V N Sbjct: 386 FADGTRDVRVEN 397 >gi|153003999|ref|YP_001378324.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter sp. Fw109-5] gi|152027572|gb|ABS25340.1| exodeoxyribonuclease VII, large subunit [Anaeromyxobacter sp. Fw109-5] Length = 483 Score = 300 bits (767), Expect = 5e-79, Method: Composition-based stats. Identities = 134/504 (26%), Positives = 226/504 (44%), Gaps = 57/504 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +SV EL+ LK+ VE V V GE++ R +SGH YFSLKD I A++W Sbjct: 24 PWSVGELTRALKNAVEPKFRDVWVAGEVANLR-RQASGHVYFSLKDADGLIGAVVWASQA 82 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++F EG E L G + + KYQ+I++ L P G+G L++ K++L +GL Sbjct: 83 RRVKFAVAEGQEVLARGFVEIYAPHGKYQLIVQELEPRGAGAAALLLQQVKERLQADGLL 142 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K +PF+P+ I V TSPTGA +RD L+ + RFP + V++ P +VQGD + + Sbjct: 143 APARKRQLPFLPRRIGVATSPTGAAVRDFLRVLHTRFPSMPVLVAPCRVQGDGAASTVVS 202 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ L D+I++ RGGGS E+L F+DE + RAIA +P++SA+GHE D Sbjct: 203 AVRALCRA-------GVDVIVVTRGGGSQEELGAFDDERLARAIAACPVPVVSAVGHEVD 255 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD AD+RA TPT AA++ PV++ L + L L RL ++ + L +L Sbjct: 256 VTVADLVADVRAATPTHAAQLVAPVRDELVARLSALRGRLERTWEGALELRRRELRALRA 315 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + LS +R+R+D L + + + + R+ Sbjct: 316 ELEDPARVLSGARHRVDDLLHAAAAAARDPLRARRTRLDPLRARLA-------------- 361 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 R + + R+ + ++ R+ + Sbjct: 362 ---------------------------------RLEPRRRVREVRLRMEASARRLGAWQA 388 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + L+ L RG++ + + + I++ +A + I +G Sbjct: 389 ATFRRETLRLQRLEGRLEPANMAKLLARGFSLVLR-DGHVISRSGQVAEGDALRIVLGEG 447 Query: 493 QANAIVINKAPPKEQPTKKCQLHN 516 +A + + + Sbjct: 448 WLDARATARDAGDDPLPGRTVPAR 471 >gi|298528345|ref|ZP_07015749.1| exodeoxyribonuclease VII, large subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298511997|gb|EFI35899.1| exodeoxyribonuclease VII, large subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 448 Score = 300 bits (767), Expect = 5e-79, Method: Composition-based stats. Identities = 130/498 (26%), Positives = 215/498 (43%), Gaps = 65/498 (13%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VSEL+ ++ +VE + V VRG+ + SGH YF+LKD + + + +K T Sbjct: 4 IFNVSELTAAIREVVEMHFPFVWVRGQATNV-SRPGSGHIYFTLKDEQAALQVVWFKNTQ 62 Query: 74 NKIEFL-------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + G E + G+I +P YQ+I E + G G L A E K + Sbjct: 63 AASRKQNSDPAASLDNGQEVICAGRIGVYPPRGTYQLIAELVQEQGLGDLFLAFEALKAR 122 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKVQGDE 185 L +EGLF + K IPF P+ + +IT+PTGA ++D ++ +I++P VQGD+ Sbjct: 123 LQQEGLFEAERKMKIPFNPERVGIITAPTGAALQDFMRVADDMGHGSEIIVYPSLVQGDK 182 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P +I AI + R +++L RGGGS+EDLW FN E + RAIA S IP+I+ Sbjct: 183 APADIVRAINRACR------EDRVQVLVLMRGGGSLEDLWAFNSEEVARAIAGSHIPVIT 236 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+AD AADLRA TP+ + ++ L L E L R +K + Sbjct: 237 GVGHEVDTTIADLAADLRAATPSHVPQHLWLQRKDLWVRLDEQEMLLVQAYKRFLKTREE 296 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L ++ + L + + + +LD L + L+ + R + +R++ F Sbjct: 297 QLQNMSRGLGWLSPARQMQRREEQLDSLEQALKREGGNFLDMYMRMVQELESRLRGKFSP 356 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + Q + QQ ++ Sbjct: 357 DYWEVRHQQLDYLQQTLKARAV-------------------------------------- 378 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-DTNNNFITQKRNLATK 482 + ++ VS L+S ++RGY+ + + F+ +++ Sbjct: 379 ---------NFLEDRENKVSFAAEKLESLDPYAPIRRGYSLVTVAKSGKFLRSVHDVSPG 429 Query: 483 TRILINFFDGQANAIVIN 500 + I DGQ + V Sbjct: 430 DVLEITVIDGQIKSRVGG 447 >gi|42560660|ref|NP_975111.1| exodeoxyribonuclease VII large subunit [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829416|sp|Q6MUD1|EX7L_MYCMS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|42492156|emb|CAE76753.1| exodeoxyribonuclease VII large subunit [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320597|gb|ADK69240.1| exodeoxyribonuclease VII, large subunit [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 469 Score = 300 bits (767), Expect = 5e-79, Method: Composition-based stats. Identities = 125/499 (25%), Positives = 222/499 (44%), Gaps = 35/499 (7%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +V EL+ LK ++E+ + V+GE+S SGH YFS+K+ + I+ ++W Sbjct: 2 EKILTVQELNEALKTLIENKQEFKDIYVQGELSNLTFN-KSGHIYFSIKEQDAAINCMMW 60 Query: 70 KGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 K KI E+G++ + G++T + + + + + G G L E+R K+L Sbjct: 61 KTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIQIHGIGDLQKIFEQRYKELE 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 ++G F K IP K + +IT+ +GA I D+++ + R P + + +FP +VQGD+ Sbjct: 121 QKGWFDPNLKKSIPEFVKNVGIITADSGAAIYDLIRTVHRRLPLINIYLFPAQVQGDKAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I N I Q N K D++I+ RGGGS EDLW FN+ +++AI NS IPIISA+ Sbjct: 181 IDITNKIKQANNFKID-----LDVLIVGRGGGSYEDLWAFNELEVLQAIKNSHIPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE DW L+DY AD+RA TPT A E+ +++ L + +I+ + + + Sbjct: 236 GHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFNEKI 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 N+ K ++Y D + ++ I N I + I Sbjct: 296 NNYKK---------DQTKYIKDNFSFKYLQLKQLSIDNTKWTKNKIDSVIY--------- 337 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + I + I + K L ++ N + + I+ Sbjct: 338 -------KLEDYKHSINNSIIHIINSQNKALKNYLIADEQKILNYLKKQISEFNYTISSF 390 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + ++ +K S L S L+ GY+ + + N+ I + + + + Sbjct: 391 KGHINQILKYEELSFDTLENKLNSLDPLKPLQNGYSIVTNLNHQKIRSYKQVKLNEDLKV 450 Query: 488 NFFDGQANAIVINKAPPKE 506 D + + ++ Sbjct: 451 ILTDSKLTVTIKEVKTNEQ 469 >gi|289677932|ref|ZP_06498822.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. syringae FF5] Length = 364 Score = 299 bits (766), Expect = 7e-79, Method: Composition-based stats. Identities = 124/357 (34%), Positives = 201/357 (56%), Gaps = 10/357 (2%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 16 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 74 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 134 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 246 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + NL RL + + + Sbjct: 247 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRL 306 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + L + + L + + L RLD L L E + ++ H+ +R+ Sbjct: 307 MRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRL 363 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 4/78 (5%), Positives = 24/78 (30%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + ++ + + ++ + ++ ++ + R+ + L R+ Sbjct: 286 DLHRRVDNLHRRLVSRMQDRLMRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRAF 345 Query: 432 SHKIKSCHTSVSITTRIL 449 + ++ L Sbjct: 346 EQNMHQRQVRLAHMQSRL 363 >gi|326201954|ref|ZP_08191824.1| exodeoxyribonuclease VII, large subunit [Clostridium papyrosolvens DSM 2782] gi|325987749|gb|EGD48575.1| exodeoxyribonuclease VII, large subunit [Clostridium papyrosolvens DSM 2782] Length = 404 Score = 299 bits (765), Expect = 9e-79, Method: Composition-based stats. Identities = 134/378 (35%), Positives = 221/378 (58%), Gaps = 12/378 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSVS+++ ++K +V +L S V +RGEIS ++ H +GH YF++KD +S + +++K Sbjct: 4 VYSVSDINNYIKQLVSRDLILSDVSIRGEISNFKH-HYTGHMYFTIKDENSLLKCVMFKS 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F PE G++ +V G I+ F +YQ+ ++ P G G L A E+ K+KL +EG Sbjct: 63 QAIALRFAPENGMKVIVSGYISVFERDGQYQLYASNMQPDGVGALHVAFEQLKEKLQQEG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF + K IP +P I ++TS TGAVIRDI+ R ++++++PV VQG + +I Sbjct: 123 LFDLEKKKSIPLLPGSIGIVTSSTGAVIRDIINVTYRRNSKMKLVLYPVAVQGPQAAGQI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + AI +LN + D+II+ARGGGS+E+LW FN+E++ R+I S+IP+ISA+GHE Sbjct: 183 SEAIKRLN------EHNKVDVIIVARGGGSLEELWAFNEEIVARSIYASNIPVISAVGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T++D+ +D+RAPTP+ AAE+AVP E L L + R+ N +++ + N L + Sbjct: 237 TDFTISDFVSDMRAPTPSAAAELAVPDIEVLLYKLESYNMRMKNSLVKKVTALQNQLQKI 296 Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ R +D L + L + II K F + ++ + + +++ Sbjct: 297 NSRPSFTQPYDRVNQQRQAIDNLVKNLVRENQAIIKDKKSQFGILAGKLDALSPLKIMER 356 Query: 369 NRQHILEKQQHIEQIVKQ 386 + Q H+ VKQ Sbjct: 357 GYGVVKNSQGHVVNSVKQ 374 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 41/114 (35%) Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 L+ + + Q +R+ I L+ + IK + I L + Sbjct: 288 ALQNQLQKINSRPSFTQPYDRVNQQRQAIDNLVKNLVRENQAIIKDKKSQFGILAGKLDA 347 Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + ++RGY ++++ + + + + ++ I DG A V + K Sbjct: 348 LSPLKIMERGYGVVKNSQGHVVNSVKQVNAGDKLEILINDGLAECDVTSVREGK 401 >gi|315223296|ref|ZP_07865157.1| exodeoxyribonuclease VII, large subunit [Streptococcus anginosus F0211] gi|315187728|gb|EFU21482.1| exodeoxyribonuclease VII, large subunit [Streptococcus anginosus F0211] Length = 446 Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats. Identities = 152/500 (30%), Positives = 234/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A IW Sbjct: 2 SEYLSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 GGVYKKLGFDLEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RF + +I++P KVQG+ Sbjct: 120 EGLFEERFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFSGVEIILYPTKVQGEGASA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+A I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++G Sbjct: 180 EVAENIRRANER------NDLDVLIIGRGGGSIEDLWAFNEEVVVRAIFESHIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L + L + RL + + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLAHLQQQQNRLAAAMSNRLTYNRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 AKLSQSVIFRQPERLYDSYLQKLDQLNLRLKQKIREYYNEEVQRVRLLQHRLEALAPLRQ 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q ++ + + ++ + + + E K Sbjct: 354 VQICQERVAQLERLLRSNMAVVYDHKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + + K ++ Sbjct: 386 -------------------LSDALLMLDTSRIVARGYAIVK-KDEQVLESIEKVNKKDQL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 I DGQ V + + Sbjct: 426 TILMRDGQIEVEVKDVERKE 445 >gi|313200721|ref|YP_004039379.1| exodeoxyribonuclease VII large subunit [Methylovorus sp. MP688] gi|312440037|gb|ADQ84143.1| exodeoxyribonuclease VII, large subunit [Methylovorus sp. MP688] Length = 400 Score = 298 bits (763), Expect = 2e-78, Method: Composition-based stats. Identities = 121/356 (33%), Positives = 194/356 (54%), Gaps = 8/356 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+EL+ + +E V GEIS +SGH YFSLKD +++ ++++G Sbjct: 8 ILTVTELNRLARDTLERAFPLFWVSGEISNLT-RAASGHWYFSLKDAGAQVRCVMFRGRN 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + +++ P EG + +T + +Q+ IE L +G GTL A EK K KL EGLF Sbjct: 67 SYLDWQPREGDKVEARALVTLYEARGDFQLTIEFLQRAGLGTLFEAFEKLKAKLQAEGLF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K PIP P+ I ++TSP A +RD+L + R P L VII+P VQG +IA Sbjct: 127 DAALKRPIPAHPQRIGIVTSPDAAALRDVLSTLRRRMPSLEVIIYPTPVQGKGAAAQIAA 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI + E D++I+ RGGGS+EDLW FN+E++ RAI S+P+IS +GHETD Sbjct: 187 AIETASARAE------VDVLIVCRGGGSMEDLWQFNEEIVARAIHGCSMPVISGVGHETD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+AAD+RA TPT AAE+ ++ L + L RL+ + +L+ ++ ++ L + Sbjct: 241 FTIADFAADVRAATPTAAAELVSADRQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTR 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + Q ++ ++L + L+ + + R+ R + + + + Sbjct: 301 RLLSPSQQIAHRGHQLQQWQWRLQQAMRQKLDRQTRQLQTLQQNLVHLNPQAILSR 356 Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 50/134 (37%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 RQ +L+ Q + + + + ++ + ++ + + L +I + +++ R++ Sbjct: 266 RQALLQAQAQLSRRLSRAMQQLLNQRMQHMDYLTRRLLSPSQQIAHRGHQLQQWQWRLQQ 325 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + K+ + + L + L RGYT + + + + L I + Sbjct: 326 AMRQKLDRQTRQLQTLQQNLVHLNPQAILSRGYTLAYAEDGSLLKSVQTLQKGKGITLQL 385 Query: 490 FDGQANAIVINKAP 503 DG V P Sbjct: 386 SDGLVKTTVDQVHP 399 >gi|239907071|ref|YP_002953812.1| exodeoxyribonuclease VII large subunit [Desulfovibrio magneticus RS-1] gi|239796937|dbj|BAH75926.1| exodeoxyribonuclease VII large subunit [Desulfovibrio magneticus RS-1] Length = 473 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 124/524 (23%), Positives = 218/524 (41%), Gaps = 75/524 (14%) Query: 9 SLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + P + V+EL+ LK +VES V VRG++ SGH YFSL+D + + + Sbjct: 2 TTTMPHVFEVAELTRALKSVVESEFPFVWVRGQVVNL-SRPGSGHVYFSLRDAEASLGVV 60 Query: 68 IWKGTLNK--------------------IEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 +KG + L +G+E +V G++T +P YQ++ E Sbjct: 61 WFKGAQAGRVTPGGERYDPLTGEVLERPLAGLLADGMEVMVAGRLTVYPPRGTYQLVAEV 120 Query: 108 LIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167 + G+G L E+ KK+L +G F K P+P P +AV+T+PTGA +RD ++ Sbjct: 121 VQEVGAGRLWLEFEELKKRLAAKGYFDAARKRPLPPHPTRVAVVTAPTGAAVRDFIRIGR 180 Query: 168 CR-FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226 R +V ++P VQG+ P I A+L+ ++++L RGGGS+EDLW Sbjct: 181 ERGHGAQVRVYPTLVQGEAAPAGIVRAMLRAVADDWA------EVLVLIRGGGSLEDLWA 234 Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 FN E + +AI + +P++ +GHE D T+AD AD+RA TP+ AA++ P + L L Sbjct: 235 FNTEEVAKAIYAAPLPVLVGVGHEVDVTIADMVADVRAATPSHAAQLLWPERGMLAQRLD 294 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + E L I L+ + L +L + L RL RL + ++ Sbjct: 295 DAEMSLRRQIGSLVSLRERELAALARGLSWLSP-----ARRLARLEDAFVVGEKRLLRAA 349 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + + + + + R+ + L + Sbjct: 350 AARLDGLS----------------RRLDNLEARLAR------RFDRQSLDARDDALTRRK 387 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 E+ I + + + + L L RGY+ Sbjct: 388 ER------------------ITAGMRLYLADRQGRLDVAAMRLAGLDPAAPLARGYSLTT 429 Query: 467 -DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509 F+ ++ ++ ++ + ++G+ A+V P + Sbjct: 430 VLRTGKFLRREGDVRPGDKLDVMVYEGRVRAVVSQDGPDDGEQP 473 >gi|317122008|ref|YP_004102011.1| exodeoxyribonuclease VII large subunit [Thermaerobacter marianensis DSM 12885] gi|315591988|gb|ADU51284.1| Exodeoxyribonuclease VII large subunit [Thermaerobacter marianensis DSM 12885] Length = 459 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 133/380 (35%), Positives = 215/380 (56%), Gaps = 12/380 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P +VSEL+ ++ +E++ L V VRGEI+ + HSSGH YF+L+D + Sbjct: 25 PWAAGAPAPVLTVSELTARIRQRLETDARLRQVWVRGEINSCK-RHSSGHLYFTLQDEGA 83 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + ++++ + F PE+G+E + G++ + + YQ+ +++L P+G G L ALE+ Sbjct: 84 TLRCVMFRSAARHLTFTPEDGMEVIAQGRVGVYEPAGTYQLYVDALEPAGLGALYLALEQ 143 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 R+++L EGLF Q K P+P P+ I V+TS GA +RDIL+ R P LRV++ PV V Sbjct: 144 RRRRLAREGLFDPQRKRPLPPFPRCIGVVTSADGAALRDILRVALGRHPRLRVVVAPVPV 203 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ + IA AI + N D++I+ RGGG+ EDLW FN+E++VRA+A+S I Sbjct: 204 QGEGAAEAIAAAIARFNR------WGGADVLIVGRGGGAREDLWTFNEEVVVRAVASSRI 257 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SA+GHE D TL D AAD+RAPTP+ AA +AVP L++ L L RL + R ++ Sbjct: 258 PVVSAVGHEIDVTLCDLAADVRAPTPSAAAALAVPELGRLEARLAELAGRLEGAVRRRLE 317 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L+ L + L + Q + R RL L ++L + + R + R+++ Sbjct: 318 QARQRLDELARRPGLRHPAQQVQAWRQRLRELQQDLTRAAVWRVAGERRRLEGLAGRLEA 377 Query: 360 DFLIHNIQKNRQHILEKQQH 379 + +++ + + Sbjct: 378 LSPLAVLRRGYSITRDAEGR 397 Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats. Identities = 17/183 (9%), Positives = 56/183 (30%), Gaps = 8/183 (4%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQI---VKQHLRYIFLEKKEKIAILHML--RE 407 + +++ + + + ++ ++ +R + ++++ L Sbjct: 274 LAADVRAPTPSAAAALAVPELGRLEARLAELAGRLEGAVRRRLEQARQRLDELARRPGLR 333 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 ++ +++L + ++ + L++ + L+RGY+ +D Sbjct: 334 HPAQQVQAWRQRLRELQQDLTRAAVWRVAGERRRLEGLAGRLEALSPLAVLRRGYSITRD 393 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT--- 524 +T + I + G+ A V P + ++ Sbjct: 394 AEGRVLTDATAVTPGQAIEVLLARGRLEAEVRAVHPGAAGVAAEETTPATPSNREEGTWK 453 Query: 525 QGE 527 QG Sbjct: 454 QGS 456 >gi|326693829|ref|ZP_08230834.1| exodeoxyribonuclease VII, large subunit [Leuconostoc argentinum KCTC 3773] Length = 426 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 149/499 (29%), Positives = 222/499 (44%), Gaps = 82/499 (16%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRI 64 S ++ L+ +LK +++ L V V GEIS G H YFS+KD + I Sbjct: 2 SESEKYLTIRALTAYLKRKFDADPYLEKVYVTGEISNL-GRRRGRHLYFSIKDPEGQAVI 60 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 A ++ N+++F+PEEG++ +G+I + S Y II+E + P G G L A E+ K Sbjct: 61 SAAMF-SYANRLKFVPEEGMKVNAVGRIQVYEPSGTYSIILEQMTPDGIGELFLAYEQLK 119 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQG 183 KKL EGLF + P+P PK IAV+TSPTGAVI DI + + RFP+ +V++FP VQG Sbjct: 120 KKLAAEGLFQLPKR-PLPVFPKKIAVVTSPTGAVIEDIARTVQRRFPMAQVVLFPALVQG 178 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D+ + I +++ D +I+ RGGG+IEDLW FNDE + R IA + IPI Sbjct: 179 DKAAASVVKQIKRIDA------SGDYDTLIVGRGGGAIEDLWAFNDETLARTIAAAKIPI 232 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 IS++GHETD TLAD AD RA TPT AAE+A PV Sbjct: 233 ISSVGHETDNTLADLVADHRAATPTAAAELATPVT------------------------- 267 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ RL+ L L ++ +I + + + R Sbjct: 268 -----------------LAQLVARLNELQLRLTVRMKALITSRQQRLARVAQRPIFQQPD 310 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 Q + + Q + +Q + RI + L Sbjct: 311 RLYVGYNQRVDQLSQRL-------------------------IQQMQQRIVTAQHQLDNL 345 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R + +++ V + T L + L RGY + + + L + Sbjct: 346 TQRQRQLRQILLQAPREKVQLLTAKLDLMSPLKILTRGY-VVLSKADQVVRHIDELQPED 404 Query: 484 RILINFFDGQANAIVINKA 502 R+ + DGQA A +I + Sbjct: 405 RVTVRLADGQATAKIIETS 423 >gi|157736686|ref|YP_001489369.1| exodeoxyribonuclease VII large subunit [Arcobacter butzleri RM4018] gi|157698540|gb|ABV66700.1| exodeoxyribonuclease VII, large subunit [Arcobacter butzleri RM4018] Length = 395 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 205/364 (56%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 ++ P SVS L+ +K ++E+ V V GEIS H+SGH YFS+KD +S + +++ Sbjct: 1 MNSPI-SVSTLNLQIKSLLETTFIQVYVEGEISNLT-YHNSGHIYFSIKDENSTLSCVMF 58 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++F E G++ ++ G +T + YQ++ + PSG G+L A E+ K KL Sbjct: 59 KGNTKYLKFQLENGLKIVITGSLTVYAPRGNYQLLCNKIEPSGIGSLSLAFEQLKTKLEA 118 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G F K +P PK IA++TSPTGA I D+ + + R+ + I+ P VQG+ Sbjct: 119 KGYFERSRKKTLPRYPKKIAIVTSPTGAAIEDMKKVATHRWSLVEFILIPTLVQGEGASL 178 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IAN+I + L DI+I+ RGGGSIEDLW FN+E++ AI + PIISA+G Sbjct: 179 DIANSIKYADKL-------NCDIMIVGRGGGSIEDLWAFNEEIVANAIYEAKTPIISAVG 231 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+ ++D+ AD+RA TP+ A E+A+P + L +LE + N ++ K L Sbjct: 232 HEVDYLISDFVADIRAATPSNAIEIALPDINEHRIYLDSLENEITNRFKNILFNKEQELK 291 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ K ++ + ++ +L+I + +K+ + + I+ +KS++L ++ K Sbjct: 292 NMKKLFEQ--NSIETKFNFIQTQINFIKSSLKINLNQKFLSYQNQIDLLKSNYLSNHPDK 349 Query: 369 NRQH 372 ++ Sbjct: 350 KEKN 353 Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I ++R ++ + I K L E K + + + + ++ T I + + Sbjct: 261 INEHRIYLDSLENEITNRFKNILFNKEQELKNMKKLFE--QNSIETKFNFIQTQINFIKS 318 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ L+ K S + + S K G+ I +N I +L I Sbjct: 319 SLKINLNQKFLSYQNQIDLLKSNYLSNHPDKKEKNGFVQI-SKSNKVI-NLADLKIGDEI 376 Query: 486 LIN 488 + Sbjct: 377 ELQ 379 >gi|296186629|ref|ZP_06855031.1| exodeoxyribonuclease VII, large subunit [Clostridium carboxidivorans P7] gi|296048666|gb|EFG88098.1| exodeoxyribonuclease VII, large subunit [Clostridium carboxidivorans P7] Length = 399 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 129/359 (35%), Positives = 209/359 (58%), Gaps = 12/359 (3%) Query: 15 YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VSEL+ ++K +V+++ + V+GEIS ++ +HSSGH YFS+KD +S+I+ ++++ + Sbjct: 6 LTVSELNGYIKKLVDNDFILGNSNVKGEISNFK-LHSSGHIYFSIKDEYSKINCVMFRSS 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++F+PE G++ +V G+++ + YQI + G G L A EK K KL +GL Sbjct: 65 ARNLKFMPENGMKVVVKGRVSVYEKDGAYQIYCNDIELDGVGELYMAFEKLKSKLQSQGL 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191 F HK IP + I V+TSPTGA +RDI+ R + ++I+P VQG + I Sbjct: 125 FEVTHKKEIPPYARKIGVVTSPTGAAVRDIINVAKRRNDAVELLIYPALVQGINASESII 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI LN + D+IILARGGGSIE+LW FNDE + +I NS II+ +GHET Sbjct: 185 KAIEYLNRI------DDIDVIILARGGGSIEELWCFNDEKLAYSIYNSKKAIITGVGHET 238 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ D+ +D RAPTP+ AAE+AV E LQS +++ + LNN+I ++K K N+L L Sbjct: 239 DYTIVDFVSDRRAPTPSAAAELAVFNLEDLQSKIVSYKNTLNNLIDFILKEKSNSLELLK 298 Query: 312 KAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + + +DRL + ++ + ++ + + + ++ + K Sbjct: 299 RNLDVNSPYSYIVNEYNNIDRLKELMNIKIKTRLEKEREKLIKANSLLTAHNPMNILNK 357 Score = 74.8 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 5/141 (3%) Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNR 412 ++ + ++ + Q I I KEK L +L+ + Sbjct: 250 RAPTPSAAAELAVFNLEDLQSKIVSYKNTLNNLIDFILKEKSNSLELLKRNLDVNSPYSY 309 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 I + +I +L + + +++ + +L + N L +GY I++ Sbjct: 310 IVNEYNNIDRLKELMNIKIKTRLEKEREKLIKANSLLTAHNPMNILNKGYAVIENEKIGV 369 Query: 473 ITQKRNLATKTRILINFFDGQ 493 + +NL ++ I DG Sbjct: 370 VNTIQNLKKLDKVKITLKDGS 390 >gi|258515787|ref|YP_003192009.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum acetoxidans DSM 771] gi|257779492|gb|ACV63386.1| exodeoxyribonuclease VII, large subunit [Desulfotomaculum acetoxidans DSM 771] Length = 400 Score = 298 bits (762), Expect = 2e-78, Method: Composition-based stats. Identities = 132/359 (36%), Positives = 209/359 (58%), Gaps = 13/359 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ ++K+ +E++ L+++ V+GEIS ++ SGH YF+LKDN+S I ++++ Sbjct: 6 SVSELNSYIKNNLENDSKLANIWVKGEISNFK-RAFSGHLYFTLKDNNSLIKTVMFRSRA 64 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PE G+ +V G I+ + YQ+ E + P G G L A E+ K+KL EGLF Sbjct: 65 LRLLFNPENGMSIIVRGYISVYERDGAYQLYAEEMEPDGIGALYVAFEQLKQKLEHEGLF 124 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +HK +P +P +A++TSP GA IRDI I R+P + +++ P VQG++ P EIA Sbjct: 125 DKRHKKNLPMLPGRVAIVTSPVGAAIRDITGIIQRRWPGMEMVLVPAAVQGNDAPAEIAR 184 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I LN L D+II+ RGGGSIE+LW FN E++ R+I S +P+ISA+GHETD Sbjct: 185 GIELLNRL------GGIDVIIVGRGGGSIEELWAFNTELVARSIFASDVPVISAVGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310 +T+AD AD+RA TP+ AAE+ VP K +Q L +L ARL + I + L Sbjct: 239 FTIADLVADVRAATPSAAAEIVVPDKIEMQRYLESLGARLYYAVQDDISLNRSKLERFMK 298 Query: 311 LKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + +R +DR+ L ++ +I R + ++++ + + + Sbjct: 299 SRVMQQPVAVICETRGQAVDRITERLNKAIKELIARDRNRLALLAGQVQALSPLATLSR 357 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 49/135 (36%), Gaps = 2/135 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + ++++ + V+ + + + + M ++ + ++ R+ Sbjct: 266 EMQRYLESLGARLYYAVQDDISLNRSKLERFMKSRVM-QQPVAVICETRGQAVDRITERL 324 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS-IQDTNNNFITQKRNLATKTRIL 486 + I +++ +Q+ + TL RGY+ + + I+ R + ++ Sbjct: 325 NKAIKELIARDRNRLALLAGQVQALSPLATLSRGYSICTEHGSKEIISDIRQIEIGEKLD 384 Query: 487 INFFDGQANAIVINK 501 + +G+ V K Sbjct: 385 VQLKNGKLLCEVRKK 399 >gi|227893298|ref|ZP_04011103.1| exodeoxyribonuclease VII (large subunit) [Lactobacillus ultunensis DSM 16047] gi|227864878|gb|EEJ72299.1| exodeoxyribonuclease VII (large subunit) [Lactobacillus ultunensis DSM 16047] Length = 450 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 141/502 (28%), Positives = 250/502 (49%), Gaps = 59/502 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V++L+Y++ +++ L V ++GE+S +R +S H YFSLKD S+I+ + Sbjct: 2 TEDKYLTVTDLNYYITQKFKNDPYLHKVFLQGELSNFRYRRNS-HQYFSLKDEKSKINVV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ +K++F PEEG++ V+G ++ + YQ ES+ P+G G L L++ + KL Sbjct: 61 MFRSYFDKVKFKPEEGMKVYVVGYVSVYGPQGSYQFYAESMEPAGLGALYEQLKQLQAKL 120 Query: 128 LEEGLF-SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 +EGLF + +HK +P P IAV+TS +GAVI DI+ + RFP + +FP +VQGD Sbjct: 121 AKEGLFTNPEHKKKLPRFPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGDT 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + ++P+IS Sbjct: 181 AADSLVSAMQQIAA-----QGDKYDVMIIGRGGGSLEDLWPFNEEKVVRQVYAMTMPVIS 235 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 ++GHETD TL D AD RA TPT AAE A P + + L +RL + + +I+ + + Sbjct: 236 SVGHETDTTLCDLVADARAATPTAAAEYATPNLVDELAGIQQLRSRLFSSMQAIIRERRD 295 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 LN + + + +DRL + L+++++ + R + + + R+ S Sbjct: 296 RLNRIKNSVIMREPTRLYDQQIETVDRLKQRLDNSMKNQLNRSNQSYQLLKQRLLSVNPD 355 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + +Q + + ++ Sbjct: 356 KQVHQVKQQEQFLIKRLVDNMQ-------------------------------------- 377 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 H +K + + + L ++ TL+RG+ D I+ + + TK Sbjct: 378 ---------HYLKDKRSGFAKVVQQLDDYSPLKTLERGFVYTTDEQGRTISSIKQVKTKD 428 Query: 484 RILINFFDGQANAIVINKAPPK 505 ++ ++F DGQA AIV K Sbjct: 429 QLNLHFKDGQAVAIVTKTKEDK 450 >gi|294340374|emb|CAZ88755.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) [Thiomonas sp. 3As] Length = 457 Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 136/487 (27%), Positives = 223/487 (45%), Gaps = 58/487 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 ++VS L + + + + VRGEISG +SGH YF+LKD +++ + ++ Sbjct: 10 VWTVSALVQAFSDALNARFNSLSVRGEISGLV-RAASGHQYFNLKDGTAQLRCVWFRQRA 68 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +G+ + + + Q+I+ES+ P G G LL A + K KL EGLF Sbjct: 69 GSAATALRDGMSVRLRATVAIYEPRGDLQLIVESVQPDGEGALLEAFLRLKAKLQIEGLF 128 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K P+P +P+ + VITS A +RD+L + R P +RV+++P VQG P E+ Sbjct: 129 DPERKRPLPALPQAVGVITSLQAAALRDVLTTLRRRSPHVRVVVYPASVQGAAAPGELLA 188 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ + +E D+I+L RGGGS++DLW FNDE + RAIA S++P+IS +GHETD Sbjct: 189 ALQRAQARRE------VDLILLVRGGGSLDDLWAFNDEALTRAIAASTLPVISGVGHETD 242 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+ ADLRAPTPT AAE+ VP + L +L + R ++ + R ++ + + L Sbjct: 243 FTLADFVADLRAPTPTAAAELGVPAQAALLDALTHTAHRASSALSRHLQREQQRCDRLAL 302 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 P L+ + L +L L L + + + +R+ + L + R+ Sbjct: 303 RWPQPAALLAAPQRHLAQLQWRLRQALNDLPRLHAQRLQLLQHRL-AHALRQRAPRERER 361 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++ + + + I R++ Sbjct: 362 LNRCERSLPEAL--------------------------------SRQISNSQLRLDRAAQ 389 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 H LQ + + TL RGY + N + LA + +L D Sbjct: 390 H---------------LQLLSPRATLARGYLLGMNANGQVLRDLTQLAPQQPLL--LADA 432 Query: 493 QANAIVI 499 Q + Sbjct: 433 QRAVRID 439 >gi|325509497|gb|ADZ21133.1| exodeoxyribonuclease VII large subunit [Clostridium acetobutylicum EA 2018] Length = 399 Score = 297 bits (761), Expect = 3e-78, Method: Composition-based stats. Identities = 140/362 (38%), Positives = 211/362 (58%), Gaps = 12/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVSEL+ ++K +V+S+ LS+ V+GEIS ++ HSSGH YFSLKD +I+ I++ Sbjct: 3 IKVLSVSELNNYIKRVVDSDYILSNAQVKGEISNFKF-HSSGHVYFSLKDEGGKINCIMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + K++F+PE G++ V G+++ + YQ+ + P G G L A EK K+KLL Sbjct: 62 RSNAEKLKFIPENGMKVNVKGRVSVYVKDGAYQLYCTEITPEGRGELYEAFEKLKEKLLN 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EG+FS++HK IP PK+I VITSPTGA IRDI+ + R + +II P VQG P Sbjct: 122 EGMFSEEHKRNIPKYPKMIGVITSPTGAAIRDIINVATRRNKSVDMIICPTLVQGVNAPG 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+ A+ LN ++ D IILARGGGSIE+LW FNDE + A+ NS P+++ +G Sbjct: 182 ELIKALDYLNNRED------IDTIILARGGGSIEELWAFNDEKLAYAVYNSKKPVVTGVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+ D+ +D RAPTP+ AAE+AVP +S ++L+ L+ I I+ K N L Sbjct: 236 HETDFTIVDFVSDRRAPTPSAAAEIAVPNINEEMNSFVSLKRALDTSIKTYIQNKCNQLE 295 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L + + + +D L+ + I + + +KS+ I+ + Sbjct: 296 IAKRMLEKNSPEILIVNGYSSIDNFKYVLDMRIANKIKIEKEKILRYNSILKSNSPINIL 355 Query: 367 QK 368 K Sbjct: 356 NK 357 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 61/135 (45%), Gaps = 2/135 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 NI + + ++ ++ +K +++ + +IA + + + I ++ I Sbjct: 264 NINEEMNSFVSLKRALDTSIKTYIQNK--CNQLEIAKRMLEKNSPEILIVNGYSSIDNFK 321 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ +++KIK + IL+S + N L +GY+ I D N I+ L + + Sbjct: 322 YVLDMRIANKIKIEKEKILRYNSILKSNSPINILNKGYSIISDEIGNNISNVDKLKEQDK 381 Query: 485 ILINFFDGQANAIVI 499 + I F DG+ NA + Sbjct: 382 VHITFKDGKVNAKID 396 >gi|15895352|ref|NP_348701.1| exodeoxyribonuclease VII large subunit [Clostridium acetobutylicum ATCC 824] gi|22095674|sp|Q97HD0|EX7L_CLOAB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|15025070|gb|AAK80041.1|AE007710_11 Exonuclease VII, large subunit [Clostridium acetobutylicum ATCC 824] Length = 399 Score = 297 bits (761), Expect = 3e-78, Method: Composition-based stats. Identities = 140/362 (38%), Positives = 211/362 (58%), Gaps = 12/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SVSEL+ ++K +V+S+ LS+ V+GEIS ++ HSSGH YFSLKD +I+ I++ Sbjct: 3 IKVLSVSELNNYIKRVVDSDYILSNAQVKGEISNFKF-HSSGHVYFSLKDEGGKINCIMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + K++F+PE G++ V G+++ + YQ+ + P G G L A EK K+KLL Sbjct: 62 RSNAEKLKFIPENGMKVNVKGRVSVYVKDGAYQLYCTEITPEGRGELYEAFEKLKEKLLN 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EG+FS++HK IP PK+I VITSPTGA IRDI+ + R + +II P VQG P Sbjct: 122 EGMFSEEHKRNIPKYPKMIGVITSPTGAAIRDIINVATRRNKSVDMIICPTLVQGVNAPG 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+ A+ LN ++ D IILARGGGSIE+LW FNDE + A+ NS P+++ +G Sbjct: 182 ELIKALDYLNNRED------IDTIILARGGGSIEELWAFNDEKLAYAVYNSKKPVVTGVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+ D+ +D RAPTP+ AAE+AVP +S ++L+ L+ I I+ K N L Sbjct: 236 HETDFTIVDFVSDRRAPTPSAAAEIAVPNINEEMNSFVSLKRALDTSIKTYIQNKCNQLE 295 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L + + + +D L+ + I + + +KS+ I+ + Sbjct: 296 IAKRMLEKNSPEILIVNGYSSIDNFKYVLDMRIANKIKIEKEKILRYNSILKSNSPINIL 355 Query: 367 QK 368 K Sbjct: 356 NK 357 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 60/135 (44%), Gaps = 2/135 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 NI + + ++ ++ +K +++ + +IA + + + I ++ I Sbjct: 264 NINEEMNSFVSLKRALDTSIKTYIQNK--CNQLEIAKRMLEKNSPEILIVNGYSSIDNFK 321 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ +++KIK + IL+S + N L +GY+ I D N I+ L + Sbjct: 322 YVLDMRIANKIKIEKEKILRYNSILKSNSPINILNKGYSIISDEIGNNISNVDKLKEPDK 381 Query: 485 ILINFFDGQANAIVI 499 + I F DG+ NA + Sbjct: 382 VHITFKDGKVNAKID 396 >gi|291532855|emb|CBL05968.1| exodeoxyribonuclease VII, large subunit [Megamonas hypermegale ART12/1] Length = 400 Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats. Identities = 132/364 (36%), Positives = 203/364 (55%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + Y+VS+L+ +L+ + + L ++ ++GEIS ++ HSSGH YF+LKDN + I + Sbjct: 1 MAEKIYTVSQLNKYLRQQFDDDIILQNIMLKGEISNFKV-HSSGHCYFTLKDNLASIKCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ K F P+ G++ + G I+ + YQ+ ++SL P G G L A E+ K KL Sbjct: 60 AFRFNAMKFRFAPQNGMKVIASGYISIYEKDGLYQLYVQSLAPEGIGELALAFEQLKNKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF ++K +PF PK I V+TS TGAVI+DI R P ++++++ V VQG+ Sbjct: 120 NDEGLFDSKYKKQLPFYPKRIGVVTSRTGAVIKDICHVAKRRNPLVKILLYSVLVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 KEI I N D+II+ RGGGS+EDLW FN+E ++RAI S IPIISA Sbjct: 180 SKEIVQGIEFFNKKCP------VDVIIIGRGGGSLEDLWAFNEENVIRAIFASKIPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+TL+D +D+RA TP+ AAE+AV KE L + + +L+ L K N Sbjct: 234 VGHETDYTLSDLTSDVRAATPSQAAELAVVEKEALVNYIESLKRDCRYKAYNLFSIKENK 293 Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N + ++ L + LD L L + K+ I ++K ++ Sbjct: 294 FNLLWKHSIFSDKERLLQSRQQELDFLNERLNKVVTDKYVNKFHQMEVIAEKLKVLNPLN 353 Query: 365 NIQK 368 +Q+ Sbjct: 354 VLQR 357 Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 17/164 (10%), Positives = 62/164 (37%), Gaps = 6/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKN---RQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + + + +++ + ++ ++ + +++ + +F K+ K Sbjct: 236 HETDYTLSDLTSDVRAATPSQAAELAVVEKEALVNYIESLKRDCRYKAYNLFSIKENKFN 295 Query: 401 IL--HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 +L H + + + + L R+ +++ K + + + L+ N L Sbjct: 296 LLWKHSIFSDKERLLQSRQQELDFLNERLNKVVTDKYVNKFHQMEVIAEKLKVLNPLNVL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 +RG++ ++ ++ +I +++ + I DG ++ Sbjct: 356 QRGFSIVK-QDDKYIKNIKDIDMNKSLNIELSDGTVETKIVQIK 398 >gi|187250465|ref|YP_001874947.1| exonuclease VII, large subunit [Elusimicrobium minutum Pei191] gi|186970625|gb|ACC97610.1| Exonuclease VII, large subunit [Elusimicrobium minutum Pei191] Length = 396 Score = 297 bits (760), Expect = 4e-78, Method: Composition-based stats. Identities = 131/360 (36%), Positives = 206/360 (57%), Gaps = 10/360 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + ++V+E+S +K ++E L+ V V GEISG + +SGH YF +KD ++ I A+++KG Sbjct: 6 NKIFTVTEISSSIKEMLEGVLNDVRVEGEISGLK-KAASGHIYFDIKDENALISAVLFKG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++G++ LV G ++ + +YQII++SL+P+ G L E+ K+KL EG Sbjct: 65 YALR-TADLKDGLKVLVRGDLSCYIKQGRYQIIVKSLVPTSVGDLYLEFERLKQKLAAEG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F ++ K P+P I V+TSPTGA ++DIL + R P L VII P VQG E P +I Sbjct: 124 IFDEERKRPLPEFASRIGVVTSPTGAALQDILSVLKRRSPNLEVIISPSLVQGQEAPAQI 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +LN + P PD+I++ RGGGS+EDLW FNDE + RAI S IP++S +GHE Sbjct: 184 VKAIERLNKI-----NPAPDVILVGRGGGSMEDLWCFNDEAVARAIYKSKIPVVSCVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LN 308 TD+T+AD+A+DLRAPTP+ AAE+ + + + L R+ N LI N + Sbjct: 239 TDFTIADFASDLRAPTPSAAAEIVAQNSAGVANYVTQLVKRMINTQNLLISLAQNRLNIA 298 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 K L + L+ D L L+ + I + + +++ + +++ Sbjct: 299 MSNKFLKDPLFYLNQREQETDDLTALLDRAFKDKIKAADNALSMLTHKLNALSPGAVLKR 358 Score = 89.8 bits (221), Expect = 9e-16, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 53/159 (33%), Gaps = 6/159 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL-----EKKEK 398 + +++ + Q+ ++ Q+VK+ + L + + Sbjct: 237 HETDFTIADFASDLRAPTPSAAAEIVAQNSAGVANYVTQLVKRMINTQNLLISLAQNRLN 296 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 IA+ + + + L ++ KIK+ ++S+ T L + + L Sbjct: 297 IAMSNKFLKDPLFYLNQREQETDDLTALLDRAFKDKIKAADNALSMLTHKLNALSPGAVL 356 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 KRG++ ++ + + + I + G Sbjct: 357 KRGFSIVR-KQGRPVKNAEEVNKGDILDIELYKGNIQTE 394 >gi|195977753|ref|YP_002122997.1| exodeoxyribonuclease VII large subunit [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|226697610|sp|B4U1W7|EX7L_STREM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|195974458|gb|ACG61984.1| probable exodeoxyribonuclease VII large subunit XseA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 446 Score = 297 bits (759), Expect = 4e-78, Method: Composition-based stats. Identities = 136/494 (27%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV++L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LSVTQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATMWAGA 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G+I + + Y IIIE P G G L E+ ++KL EG Sbjct: 63 YKKLGFDLEEGMKLNVVGRIQLYEPNGSYSIIIEKAEPDGIGALALQFEQLRQKLAGEGF 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P + V+TSP+GAVIRDI+ IS RFP + +++FP KVQG+ +E+A Sbjct: 123 FDERHKQALPQFVTKVGVVTSPSGAVIRDIITTISRRFPGVSILLFPTKVQGEGAAQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 183 ANIARANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS-- 309 D TLAD+ AD RA TPT AAE+A P+ + S I + + + Sbjct: 237 DTTLADFVADRRAATPTAAAELATPITKTDIVSWIAEQQNRSYQACLRYIRQGQERVDKL 296 Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ RLDRL L + + + + +R+ S + +++ Sbjct: 297 SYSVMFRQPERLYDAYSQRLDRLTTSLMTTFKETLSEAKQEHLILEHRLASVNVQARLER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + + Sbjct: 357 YQDRLATAHRLLIANMTNQYDSKLAGFER------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY ++ + +++ + I Sbjct: 386 ----------------AQAALLSLDTSRIIARGYALLK-KDGAVAACVKDIKKGDHLSIV 428 Query: 489 FFDGQANAIVINKA 502 DGQ V + Sbjct: 429 MRDGQLEVEVEDVN 442 >gi|315635856|ref|ZP_07891118.1| exodeoxyribonuclease VII large subunit [Arcobacter butzleri JV22] gi|315479835|gb|EFU70506.1| exodeoxyribonuclease VII large subunit [Arcobacter butzleri JV22] Length = 395 Score = 297 bits (759), Expect = 4e-78, Method: Composition-based stats. Identities = 122/364 (33%), Positives = 205/364 (56%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 ++ P SVS L+ +K ++E+ V V GEIS H+SGH YFS+KD +S + +++ Sbjct: 1 MNSPI-SVSTLNLQIKSLLETTFIQVYVEGEISNLT-YHNSGHIYFSIKDENSTLSCVMF 58 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 KG ++F E G++ ++ G +T + YQ++ + PSG G+L A E+ K KL Sbjct: 59 KGNTKYLKFQLENGLKIVITGSLTVYAPRGNYQLLCNKIEPSGIGSLSLAFEQLKTKLEA 118 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G F K +P PK IA++TSPTGA I D+ + + R+ + I+ P VQG+ Sbjct: 119 KGYFERSRKKVLPRYPKKIAIVTSPTGAAIEDMKKVATHRWSLVEFILIPTLVQGEGASL 178 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IAN+I + L DI+I+ RGGGSIEDLW FN+E++ AI + PIISA+G Sbjct: 179 DIANSIKYADKL-------NCDIMIVGRGGGSIEDLWAFNEEIVANAIYEAQTPIISAVG 231 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D+ ++D+ AD+RA TP+ A E+A+P + L +LE + N ++ K L Sbjct: 232 HEVDYLISDFVADIRAATPSNAIEIALPDINEHRIYLDSLENEITNRFKNILFNKEQELK 291 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ K ++ + ++ +L+I + +K+ + + I+ +KS++L ++ K Sbjct: 292 NMKKLFEQ--NSIETKFNFIQTQINFIKSSLKINLNQKFLSYQNQIDLLKSNYLSNHPDK 349 Query: 369 NRQH 372 ++ Sbjct: 350 KEKN 353 Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 4/123 (3%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I ++R ++ + I K L E K + + + + ++ T I + + Sbjct: 261 INEHRIYLDSLENEITNRFKNILFNKEQELKNMKKLFE--QNSIETKFNFIQTQINFIKS 318 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ L+ K S + + S K G+ I +N I +L I Sbjct: 319 SLKINLNQKFLSYQNQIDLLKSNYLSNHPDKKEKNGFVQI-SKSNKVI-NLADLKIGDEI 376 Query: 486 LIN 488 + Sbjct: 377 ELQ 379 >gi|307709373|ref|ZP_07645831.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK564] gi|307619956|gb|EFN99074.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK564] Length = 446 Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats. Identities = 149/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGSAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +PIIS++G Sbjct: 180 EIACNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQKKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQVVQERTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMVLVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + I NL ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVK-KDESVIDSVENLKKTDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|297588521|ref|ZP_06947164.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC 53516] gi|297573894|gb|EFH92615.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC 53516] Length = 444 Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats. Identities = 139/492 (28%), Positives = 224/492 (45%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV E+S ++++ + + LS+V V GEIS + + SGH YF LKD + I +I+K Sbjct: 3 VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDEKALISCMIFKT 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++G + + G ITT+ GSS YQ++++ SG+G L + K+KL +EG Sbjct: 62 MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEQEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 FS+ K I PK I VITS TGA + DI + I R+P+ ++I+ VQG++ + I Sbjct: 122 YFSESTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAESI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I ++ D II+ RGGGS EDL +NDE +++ I N+ PIISA+GHE Sbjct: 182 IKGIKYMDEQ-------NLDTIIVGRGGGSFEDLNSYNDENLLKTIYNAKTPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+ L+D+ ADLRA TPT AAE+A + L+ L A++N I+IR + + L Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFDELKYFLQESYAKINRILIRRFEDENQELEYY 294 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 K L + II + + + +K + R Sbjct: 295 AKQLEFLGP--------------------KNIIKEHMDNLQFLKDNLK--------KAYR 326 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +++ +K +E + + + + K+ + Sbjct: 327 KNLQDK-----------------YNEELNIYHKLSLLKPDKLLSLEIEKLNKIRITMIKN 369 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L I + L L++GY + NN I+ ++ I++ Sbjct: 370 LISNINYKELILDSYKNNLLHLNPSTILEKGYAKVL-KNNKSISSVDDVMENENIILIMK 428 Query: 491 DGQANAIVINKA 502 DG+ + V NK Sbjct: 429 DGKLDTTVQNKE 440 >gi|116515460|ref|YP_816538.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae D39] gi|122278576|sp|Q04KB0|EX7L_STRP2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|124012085|sp|Q8DPM9|EX7L_STRR6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|116076036|gb|ABJ53756.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae D39] Length = 446 Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE + P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|15903132|ref|NP_358682.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae R6] gi|15458712|gb|AAK99892.1| Exodeoxyribonuclease large subunit [Streptococcus pneumoniae R6] Length = 448 Score = 296 bits (758), Expect = 6e-78, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 4 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE + P G G L E+ KKKL E Sbjct: 62 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 122 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 182 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 236 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 295 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 296 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 356 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 387 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 388 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 427 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 428 TLLMRDGQVELEVKDVKTKE 447 >gi|225868945|ref|YP_002744893.1| exodeoxyribonuclease VII large subunit [Streptococcus equi subsp. zooepidemicus] gi|225702221|emb|CAW99959.1| putative exodeoxyribonuclease VII large subunit [Streptococcus equi subsp. zooepidemicus] Length = 451 Score = 296 bits (758), Expect = 6e-78, Method: Composition-based stats. Identities = 136/494 (27%), Positives = 221/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV++L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 10 LSVTQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATMWAGA 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G+I + + Y IIIE P G G L E+ ++KL EG Sbjct: 68 YKKLGFDLEEGMKLNVVGRIQLYEPNGSYSIIIEKAEPDGIGALALQFEQLRQKLAGEGF 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P + V+TSP+GAVIRDI+ IS RFP + +++FP KVQG+ +E+A Sbjct: 128 FDERHKQALPQFVTKVGVVTSPSGAVIRDIITTISRRFPGVSILLFPTKVQGEGAAQEVA 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 188 ANIARANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS-- 309 D TLAD+ AD RA TPT AAE+A P+ + S I + + + Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDIVSWIAEQQNRSYQACLRYIRQGQERVDKL 301 Query: 310 -LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ RLDRL L + + + + +R+ S + +++ Sbjct: 302 SYSVMFRQPERLYDAYSQRLDRLTTSLMTTFKETLSEAKQEHLILEHRLASVNVQARLER 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + + Sbjct: 362 YQDRLATAHRLLIANMTNQYDSKLAGFER------------------------------- 390 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY ++ + +++ + I Sbjct: 391 ----------------AQAALLSLDTSRIIARGYALLK-KDGVVAACVKDIKKGDHLSII 433 Query: 489 FFDGQANAIVINKA 502 DGQ V + Sbjct: 434 MRDGQLEVEVEDVN 447 >gi|303254294|ref|ZP_07340403.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS455] gi|303258841|ref|ZP_07344820.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP-BS293] gi|303261525|ref|ZP_07347472.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP14-BS292] gi|303264195|ref|ZP_07350115.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS397] gi|303266174|ref|ZP_07352067.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS457] gi|303268099|ref|ZP_07353899.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS458] gi|301801932|emb|CBW34657.1| putative exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae INV200] gi|302598788|gb|EFL65825.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS455] gi|302637105|gb|EFL67593.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP14-BS292] gi|302639784|gb|EFL70240.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP-BS293] gi|302642316|gb|EFL72663.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS458] gi|302644344|gb|EFL74598.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS457] gi|302646007|gb|EFL76234.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae BS397] Length = 446 Score = 296 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE + P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|260890095|ref|ZP_05901358.1| hypothetical protein GCWU000323_01257 [Leptotrichia hofstadii F0254] gi|260860118|gb|EEX74618.1| exodeoxyribonuclease VII, large subunit [Leptotrichia hofstadii F0254] Length = 450 Score = 296 bits (757), Expect = 6e-78, Method: Composition-based stats. Identities = 134/486 (27%), Positives = 223/486 (45%), Gaps = 52/486 (10%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +SVS+++ +K +E + ++ + GE+S + SGH YF+LKD ++ + Sbjct: 5 MEQTVFSVSDINREVKMFLEGTNTFKNIFIEGELSNIT-YYRSGHLYFTLKDANASVKCA 63 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126 I++ + +EG + G +T + + YQI+ + L S G +E KK Sbjct: 64 IFRYKYRGVPEDLKEGDLVKIRGSVTLYEANGSYQIVADFLEKSNSLGLFYEKMEMLKKL 123 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 E+G FSD+ K +P +P I V+T+ TGA IRDI+ RFP + + ++P KVQG+ Sbjct: 124 YFEKGYFSDEIKKQLPKLPINIGVVTADTGAAIRDIINTTHKRFPNVNIYLYPAKVQGEG 183 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +E++ I N + E D +I+ RGGGSIEDLW FN+E ++ AI S IP+IS Sbjct: 184 AAREVSAGIEFFNRMNEE-KYLEIDTLIVGRGGGSIEDLWAFNEEAVIEAIYKSEIPVIS 242 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D L+D AD RA TPT AAE+ +P K L L + L K +N Sbjct: 243 AVGHEIDNLLSDLVADKRAATPTQAAEILIPEK-------DKLTDELESKKNLLSKLLLN 295 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + + K L R N I+ K ++ S L Sbjct: 296 RVAMMKKELE-------------YRKNNYYIKNFANILDNKKFDLMEKEQKL-SRELRRI 341 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +QK+R+ + ++Q ++I + I ++KK Sbjct: 342 VQKSREQLDYRKQRFDRI------------------------NLQKIILSEKENLKKKSA 377 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + I+ ++ + L ++ + LK+GYT + N + + L+ + ++ Sbjct: 378 ELNQIILEFFENRKKELKYKKAQLSKYSVSDILKQGYTITR-KNGKIVKRGIELSKEDKL 436 Query: 486 LINFFD 491 I F D Sbjct: 437 EIEFSD 442 >gi|182684063|ref|YP_001835810.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae CGSP14] gi|182629397|gb|ACB90345.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae CGSP14] Length = 448 Score = 296 bits (757), Expect = 7e-78, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 4 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE + P G G L E+ KKKL E Sbjct: 62 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 122 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 182 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 236 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 295 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 296 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 355 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 356 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 387 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 388 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 427 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 428 TLLMRDGQVELEVKDVKTKE 447 >gi|307708728|ref|ZP_07645191.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis NCTC 12261] gi|307615302|gb|EFN94512.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis NCTC 12261] Length = 446 Score = 296 bits (757), Expect = 7e-78, Method: Composition-based stats. Identities = 149/500 (29%), Positives = 231/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIKFEQLKKKLAE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQPLPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGSAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DNLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + I+R+ + Sbjct: 294 KKCSHSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQVVQARIHRLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DG+ V + + Sbjct: 426 TLLMRDGRVELEVKDVKTKE 445 >gi|150390266|ref|YP_001320315.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus metalliredigens QYMF] gi|166919629|sp|A6TR38|EX7L_ALKMQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|149950128|gb|ABR48656.1| exodeoxyribonuclease VII, large subunit [Alkaliphilus metalliredigens QYMF] Length = 410 Score = 295 bits (756), Expect = 8e-78, Method: Composition-based stats. Identities = 140/364 (38%), Positives = 215/364 (59%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SVSE+++++K I+ + LS+V ++GEIS Y+ +HSSGH YF+LKD SR+ ++ Sbjct: 1 MQIKALSVSEINHYIKRIMINDPILSNVYIKGEISNYK-LHSSGHIYFTLKDEKSRVSSV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K +++FLPEEG++ L G I+ + YQ ++ + +G G L A ++ K+KL Sbjct: 60 MFKTNTEQLKFLPEEGMQVLCRGYISLYERGGLYQFYVDHMEAAGVGALYLAYQQLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++G F + K IP IP+ IAV+TSPTGA +RDI+ I RFP + + +FPV VQGD Sbjct: 120 EKQGYFDGKFKKEIPLIPRKIAVVTSPTGAAVRDIISVIKRRFPHVEIYLFPVLVQGDRA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 IA A+ LN D+ I+ RGGGSIE+LW FN+E + AI +S +PIISA Sbjct: 180 APSIARAVELLNLF------GGIDVAIIGRGGGSIEELWPFNEETVAEAIFSSQVPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTP+ AAE VP + + L L+ RLN +++ I K N Sbjct: 234 VGHETDFTIADFVADLRAPTPSVAAERVVPDVKEVVERLNTLKDRLNKTLVKSIDAKRNQ 293 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + N + + LD L ++L N+ + + + + R+ S + Sbjct: 294 LGIIKSNYYFKNPLNMIYDRQQHLDILMKDLTRNINVKNSLYSNNVHRLGERLNSVSPLS 353 Query: 365 NIQK 368 + Sbjct: 354 VFSR 357 Score = 87.9 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 2/140 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + + + + I + + N I+ H+ L+ + Sbjct: 270 ERLNTLKDRLNKTLVKSIDAKR--NQLGIIKSNYYFKNPLNMIYDRQQHLDILMKDLTRN 327 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ K +V L S + + RGY ++ I N+ K I + Sbjct: 328 INVKNSLYSNNVHRLGERLNSVSPLSVFSRGYALAENKKGERIKTISNVKLKESITVQLI 387 Query: 491 DGQANAIVINKAPPKEQPTK 510 DGQ + V N + K Sbjct: 388 DGQLSCEVTNILKEDKLVGK 407 >gi|256847383|ref|ZP_05552829.1| exodeoxyribonuclease VII, large subunit [Lactobacillus coleohominis 101-4-CHN] gi|256716047|gb|EEU31022.1| exodeoxyribonuclease VII, large subunit [Lactobacillus coleohominis 101-4-CHN] Length = 463 Score = 295 bits (756), Expect = 9e-78, Method: Composition-based stats. Identities = 127/509 (24%), Positives = 225/509 (44%), Gaps = 73/509 (14%) Query: 10 LDHPEYSVSELSYHLKHIVESN----LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--- 62 + +V++L+ +++ +++ ++ + GE++ Y SS H YFSLKD++ Sbjct: 2 TEVEPITVNQLTKYIRRKFQADPYIYQTNFWLVGELTDY--RPSSRHQYFSLKDDNEELS 59 Query: 63 -----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 +I A+++ K++F PE G++ LV G + +P YQ + + G G+L Sbjct: 60 ARDQYKISAVMFANDFRKVKFQPENGMKVLVYGHVDIYPNRGAYQFYVSQMEVQGIGSLQ 119 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 A ++ +KL +EGLF K I P+ +A++TS AV DI+ R P ++++ Sbjct: 120 VAFQQMYEKLKKEGLFDQPKKV-IRSFPQRVAIVTSNDAAVKHDIITTFRRRNPLIQLVC 178 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 +P KVQGD+ IA+ I Q++ D +I+ARGGGS DLW FN E + RAI Sbjct: 179 YPTKVQGDDAAPMIAHQIRQVSA------DGNYDTLIVARGGGSRGDLWAFNSEEVGRAI 232 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV-PVKEHLQSSLINLEARLNNI 295 A IP+IS++GHE D T+AD AD R TPT AA A + +++ + N+ +L+++ Sbjct: 233 AECPIPVISSVGHEVDTTIADLVADDREATPTSAAVRASAWLLADVKTEIQNVRQQLSHL 292 Query: 296 IIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + I + L +L K + L RLD L ++L ++ K + + Sbjct: 293 MKLDIDHLQERLTALQKNYIFQEPTRILQQPTERLDDLKQQLMVSVRQRQHEKQQQLRLL 352 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 ++ S +++R+ + QQ + + + + Sbjct: 353 TTQLHSFSPTDRFKRDRERLQGLQQLLRTVGSRQIH------------------------ 388 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI 473 ++ L + + L RGY+ + +N I Sbjct: 389 -----------------------QSQLELTGLINQLVTLDPEKVLARGYSYVT-QSNQVI 424 Query: 474 TQKRNLATKTRILINFFDGQANAIVINKA 502 Q + RI ++ DG A + Sbjct: 425 KQVGQVKVADRITVHLVDGDVEAEIKQIK 453 >gi|307704840|ref|ZP_07641734.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK597] gi|307621616|gb|EFO00659.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK597] Length = 446 Score = 295 bits (756), Expect = 1e-77, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQTLPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANER------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R I K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQEKRMATAVRNILSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ I Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPITK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DG+ V + + Sbjct: 426 TLLMRDGRVELEVKDVKTKE 445 >gi|323342015|ref|ZP_08082248.1| exodeoxyribonuclease VII large subunit [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464440|gb|EFY09633.1| exodeoxyribonuclease VII large subunit [Erysipelothrix rhusiopathiae ATCC 19414] Length = 496 Score = 295 bits (756), Expect = 1e-77, Method: Composition-based stats. Identities = 128/500 (25%), Positives = 225/500 (45%), Gaps = 20/500 (4%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+E LK +++ + +V + GE+S ++ H SGH YFSLKD+ SRI +++ + Sbjct: 8 TVTEFVNELKGVIDQHPSFKNVALVGELSNFKAHH-SGHFYFSLKDDKSRITCAMFRRSA 66 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +K+ F P++G + ++ G+ + + QI + + G G L EK KK + G F Sbjct: 67 SKVLFRPKDGDKVVIFGRCEVYTDTGTVQIYADRMNLDGLGDLYIQFEKLKKDFEDRGYF 126 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 H+ IP P+ IAVI A DI + + R+P+ + I VQGD K + Sbjct: 127 DPNHRKKIPKYPQRIAVIVGENSAAYADITRTLQERWPIAKQIDLLAYVQGDNASKSLVQ 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I + + + D IIL RGGGSIEDLW FN +V +I S IPIIS IGHE+D Sbjct: 187 QIQRAH-------HEQADTIILGRGGGSIEDLWAFNTPEVVESIFKSEIPIISGIGHESD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310 TL+D+ +D RA TPT AA A P +++ + + + + + + Sbjct: 240 VTLSDFVSDYRAATPTAAAVAATPNWVEMKAMIRDYKNQYYLAVRNKYLRRSGDYTSLIQ 299 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 AL + + + +LD L + H + ++F + + +I+ + L+ + Sbjct: 300 SSALKDPVLFVERKQQKLDTLTVRITH--QQVLFDESKRMLALISNRMENSLLLKYNNSS 357 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 I + ++Q + + + + I I++ R I Sbjct: 358 NIINQYLGLSSATIQQKMTQSLQKVDMMRSRFDFYSQYIDRSIKQNQGMIQQYDERFYSI 417 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKR----GYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ + L+ + + ++R GY + + + + ++ RI Sbjct: 418 MERGLNLKKERLNDILKSLKYRSPLDVIQRNLNQGYIIPRVNDIHVV-NAESVNVDDRIQ 476 Query: 487 INFFDGQANAIVINKAPPKE 506 + F DG VI+K P E Sbjct: 477 LEFRDGFVLTQVISKEPKDE 496 >gi|229814966|ref|ZP_04445304.1| hypothetical protein COLINT_02009 [Collinsella intestinalis DSM 13280] gi|229809453|gb|EEP45217.1| hypothetical protein COLINT_02009 [Collinsella intestinalis DSM 13280] Length = 492 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 119/501 (23%), Positives = 206/501 (41%), Gaps = 33/501 (6%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHS 62 + D SVS+ + + + V GE++G+RG SGH YF +KD + Sbjct: 16 VADMGESDSDALSVSQAAELAAGALHGV-PKITVLGEVTGFRGPNARSGHCYFQIKDESA 74 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ I+WKGT +K F +G++ L G + + K S +G G L + + Sbjct: 75 ALECIVWKGTYDKRAFDLRDGLQVLFTGTFDLYKPTGKMSFKASSFTLAGEGLLRQQVAQ 134 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 +KL EGL + K IP +AV+TS +GAVI D+ + + R P + V+ KV Sbjct: 135 LAEKLRREGLMEPERKRRIPVFCTRVAVVTSLSGAVINDVKRTLRRRNPMVEVVCVGAKV 194 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ P E+ + + P PD I+L RGGGS EDL FNDE + RA+A + Sbjct: 195 QGEGAPAELVEGLRRA-----AAIAPAPDCILLVRGGGSFEDLMTFNDEGLARAVAACPV 249 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+++ IGHE D ++ D +D R TPT AAE P L S+L E RL + Sbjct: 250 PVVTGIGHEPDNSICDMVSDRRCSTPTAAAESVAPEFSELVSALDGREQRLQRVFEGK-- 307 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + + D L L +++ + R+ R + R Sbjct: 308 -------------------IVRAASACDGLGGRLGRAMDVRLERERRSLDAFATRPCLTS 348 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + + + + + ++ + ++ L + ++ + ++ Sbjct: 349 PANIVDRREVELAQTVDRFCTACERAQGRFAM----ELDRLAPRLRSSTAQMDRMGHALE 404 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 +R+ + + + + + L + + L RGY+ D + T+ + Sbjct: 405 LAASRLRSKGAQLLSAPVAELGRSAAALDALSPLKVLGRGYSIAYDGGGSVATRADSFHV 464 Query: 482 KTRILINFFDGQANAIVINKA 502 + + DG A V Sbjct: 465 GDALRLRMADGDVLATVDAVE 485 >gi|149008190|ref|ZP_01831695.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP18-BS74] gi|307127201|ref|YP_003879232.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae 670-6B] gi|147760371|gb|EDK67351.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP18-BS74] gi|306484263|gb|ADM91132.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae 670-6B] gi|332074542|gb|EGI85016.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae GA17545] Length = 446 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQ------WDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|291520795|emb|CBK79088.1| exodeoxyribonuclease VII, large subunit [Coprococcus catus GD/7] Length = 403 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 124/404 (30%), Positives = 204/404 (50%), Gaps = 13/404 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSVS ++ ++K + + +H+ VRGE+S + HSSGH YF+LKD I +++ G Sbjct: 6 VYSVSSVNQYIKSLFMDDFALNHIYVRGEVSNCK-YHSSGHIYFTLKDRGGAIACVMFAG 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F EG+ +V G ++ + KYQ+ +I G+G L A E KKKLL EG Sbjct: 65 NRKGLNFRMSEGMAVIVYGSVSVYERDGKYQLYAREIIQEGAGRLYEAYEALKKKLLAEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF D+HK IP PK + V+T+ TGA ++DI+ R P L+++ P VQGD + + Sbjct: 125 LFDDEHKQKIPKYPKRLGVVTARTGAAVQDIINVSLRRNPWLQIVFCPSAVQGDGAAQSV 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L D++I+ RGGGSIEDLW FN+E++ RA+ S+P+ISA+GHE Sbjct: 185 VRGIHALEAA-------GVDVMIVGRGGGSIEDLWAFNEEIVARAVYECSVPVISAVGHE 237 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ D+ +DLRAPTP+ AAE+AVP + + E L++ + + + + + Sbjct: 238 TDTTIIDFVSDLRAPTPSAAAELAVPDMRVILGQIQGYEESLSHAMEQAVLRNRQRVENY 297 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + L+ R RL + L + + +++ + +++ Sbjct: 298 QRIFRHLNPQSRLNDRRQRLMEIEERLRIGMNRKLDAAKSELAIRTQKLEGVSPLRQLER 357 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 ++ +++ H Q + L + + K R Sbjct: 358 GYAYVSDEEGHGITSAGQVTKGQLLLLDVRDGRIESEVTAVKKR 401 Score = 101 bits (251), Expect = 4e-19, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 59/151 (39%), Gaps = 1/151 (0%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE-QTKN 411 + S + R + + Q + E + + + ++ + R ++ Sbjct: 249 LRAPTPSAAAELAVPDMRVILGQIQGYEESLSHAMEQAVLRNRQRVENYQRIFRHLNPQS 308 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 R+ + ++ R+ ++ K+ + + ++I T+ L+ + L+RGY + D + Sbjct: 309 RLNDRRQRLMEIEERLRIGMNRKLDAAKSELAIRTQKLEGVSPLRQLERGYAYVSDEEGH 368 Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKA 502 IT + +L++ DG+ + V Sbjct: 369 GITSAGQVTKGQLLLLDVRDGRIESEVTAVK 399 >gi|292670716|ref|ZP_06604142.1| exodeoxyribonuclease 7 large subunit [Selenomonas noxia ATCC 43541] gi|292647662|gb|EFF65634.1| exodeoxyribonuclease 7 large subunit [Selenomonas noxia ATCC 43541] Length = 401 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 128/358 (35%), Positives = 200/358 (55%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+++ ++K + E LS + +RGE+S ++ SGH YF+LKD + + +++ G Sbjct: 5 SVSDVTRYIKGLFEGEEILSAILIRGELSNFKRYP-SGHCYFTLKDAEASMKCVMFNGYA 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ + G ++ + YQ+ + SL P G+G L A E+ K++L EGLF Sbjct: 64 RNLRFTPENGMQVIAGGSVSVYERDGVYQLYVNSLTPEGAGALALAFEQLKERLAAEGLF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + HK P+P P+ I ++TS GAV+RDI + R+P +++I+ PV VQG E +IA Sbjct: 124 DETHKQPLPRFPRRIGIVTSSAGAVLRDIHKVTKRRWPGIQLILCPVLVQGTEAAGQIAG 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ N D++I+ RGGGS EDLW FN+E++VRAI +S IP+ISA+GHETD Sbjct: 184 AVKFFNRKYP------VDVLIVGRGGGSAEDLWAFNEEIVVRAIYDSKIPVISAVGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TLAD+ +D RA TP+ AAE+AVP L L RL+ R + +++ L SL Sbjct: 238 TTLADFVSDRRAATPSQAAELAVPDAGELCQYAAGLLTRLSAGRKRQMGQRMSYLKSLTD 297 Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 N LS D + +L ++ H I+ R++ + + + Sbjct: 298 RPWRRNPGLLLSAPIQHTDHVTEQLYRAVKEQRTNTRHHLELILKRLELLNPVQILYR 355 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 3/137 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q+ + K+ + K R + H + ++ Sbjct: 268 QYAAGLLTRLSAGRKRQMGQRMSYLKSLTDR--PWRRNPGLLLSAPIQHTDHVTEQLYRA 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + + + + L+ L RG++ ++ + +++ + L+ + I F Sbjct: 326 VKEQRTNTRHHLELILKRLELLNPVQILYRGFSIVE-KDGRTVSRAKELSVGDHLNITFA 384 Query: 491 DGQANAIVINKAPPKEQ 507 DG+ +A+V K Sbjct: 385 DGKISAVVKAKEKQNGT 401 >gi|257126238|ref|YP_003164352.1| exodeoxyribonuclease VII large subunit [Leptotrichia buccalis C-1013-b] gi|257050177|gb|ACV39361.1| exodeoxyribonuclease VII, large subunit [Leptotrichia buccalis C-1013-b] Length = 446 Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats. Identities = 134/486 (27%), Positives = 226/486 (46%), Gaps = 52/486 (10%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +SVS+++ +K +E + ++ + GE+S + SGH YF+LKD + + Sbjct: 1 MEQTVFSVSDINREVKMFLEGTNTFKNIFIEGELSNIT-YYRSGHLYFTLKDASASVKCA 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126 I++ + +EG + G +T + + YQI+ + L S G L +E KK Sbjct: 60 IFRYKYRGVPEDLKEGDLVKIRGSVTLYEANGSYQIVADFLEKSNSLGLLYEKMEMLKKL 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 E+G FSD+ K +P +P IAV+T+ TGA IRDI+ RFP + + ++P KVQG+ Sbjct: 120 YFEKGYFSDEIKKQLPKLPINIAVVTADTGAAIRDIINTTHKRFPNVNIYLYPAKVQGEG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +E++ I N + E + D +I+ RGGGSIEDLW FN+E ++ AI S IP+IS Sbjct: 180 AAREVSAGIEFFNRMNEE-KQLKIDTLIVGRGGGSIEDLWAFNEEEVIEAIYKSEIPVIS 238 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D L+D AD RA TPT AAE+ +P KE L L + + L+ +++ + Sbjct: 239 AVGHEIDNLLSDLVADKRAATPTQAAEILIPEKEKLTDELESKKNLLSKLLLNKVTMMKK 298 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L R N I+ K ++ S L Sbjct: 299 ELEY--------------------RKNNYYIKNFANILDNKKFDLMEKEQKL-SRELRRI 337 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +QK+R+ + ++Q ++I + I ++KK Sbjct: 338 VQKSREQLDYRKQRFDRI------------------------NLQKIILSEKENLKKKSA 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + I+ ++ + L ++ + LK+GYT + N + + L+ + ++ Sbjct: 374 ELNQIILESFENRKKELKYKKAQLSKYSVSDILKQGYTITR-KNGKIVKRGIELSKEDKL 432 Query: 486 LINFFD 491 I F D Sbjct: 433 EIEFSD 438 >gi|320162024|ref|YP_004175249.1| exodeoxyribonuclease VII large subunit [Anaerolinea thermophila UNI-1] gi|319995878|dbj|BAJ64649.1| exodeoxyribonuclease VII large subunit [Anaerolinea thermophila UNI-1] Length = 413 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 134/370 (36%), Positives = 206/370 (55%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + P SVSEL+ ++ ++E LS + V GEIS + +SGH YF+LKD+ Sbjct: 1 MDMPSLFPTPALSVSELTRLIRSLLESEPALSEIWVAGEISNFT-RAASGHVYFTLKDSG 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + +IW+ + ++GI G I + YQ + ++ P+G G L Sbjct: 60 AALKCVIWRNAARTLRVPLQDGIAIEAFGSIGVYEQGGNYQFYVTAVRPAGEGYLYQQFL 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K +L EGLF+++ K PIP P+ I V+TSPTGA ++DIL + R+P + VI+ P Sbjct: 120 RLKAQLEAEGLFAEERKRPIPTFPRRIGVVTSPTGAALQDILNTLRRRYPLVEVILAPSA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+E P E+ A+ LN + P D+I+LARGGGSIEDLW FNDE +VR +A S Sbjct: 180 VQGEEAPLELVQALNALNRI------PDLDVILLARGGGSIEDLWAFNDEGVVRTVAASR 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+I+ +GHETD+TL D+AADLRAPTPTGAA +A P + L + RLN +I + + Sbjct: 234 VPVITGVGHETDFTLVDFAADLRAPTPTGAATLATPDRAELLIQVERTLQRLNRLISQRV 293 Query: 301 KYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + LN L L + + +R RLD L++ +I ++ H + + Sbjct: 294 NLESARLNQLESRLQRASPVRRIEDNRQRLDNAILRLQNTAARLIAQRQAHLQALNAHLS 353 Query: 359 SDFLIHNIQK 368 + + +++ Sbjct: 354 ALNPLAVLER 363 Score = 109 bits (272), Expect = 1e-21, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 2/136 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + Q + +++ Q + + + L R RI + I R++ Sbjct: 277 QVERTLQRLNRLISQRVNLESARLNQLESRLQ--RASPVRRIEDNRQRLDNAILRLQNTA 334 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + I + L + L+RG+ I+ +T+ + I D Sbjct: 335 ARLIAQRQAHLQALNAHLSALNPLAVLERGFALIEHPEGGILTRAAQAQAGETVRIRLAD 394 Query: 492 GQANAIVINKAPPKEQ 507 G A V + E+ Sbjct: 395 GALTAKVEHVLLKPEK 410 >gi|169832990|ref|YP_001694644.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae Hungary19A-6] gi|226697615|sp|B1IC09|EX7L_STRPI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|168995492|gb|ACA36104.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae Hungary19A-6] Length = 446 Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + ++ + E K Sbjct: 354 IQRYQDRLGQLDKLLDSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|332201674|gb|EGJ15744.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae GA47368] Length = 446 Score = 295 bits (754), Expect = 2e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + ++ + E K Sbjct: 354 IQRYQDRLGQLDKLLDSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|149012258|ref|ZP_01833327.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP19-BS75] gi|147763584|gb|EDK70519.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP19-BS75] Length = 446 Score = 295 bits (754), Expect = 2e-77, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 228/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQ------WDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|15901070|ref|NP_345674.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae TIGR4] gi|111657817|ref|ZP_01408534.1| hypothetical protein SpneT_02000999 [Streptococcus pneumoniae TIGR4] gi|148998637|ref|ZP_01826076.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP11-BS70] gi|168577213|ref|ZP_02723022.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae MLV-016] gi|225856880|ref|YP_002738391.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae P1031] gi|307067857|ref|YP_003876823.1| exonuclease VII large subunit [Streptococcus pneumoniae AP200] gi|22095675|sp|Q97QJ8|EX7L_STRPN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783714|sp|C1CKV3|EX7L_STRZP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|14972688|gb|AAK75314.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae TIGR4] gi|147755474|gb|EDK62522.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP11-BS70] gi|183577204|gb|EDT97732.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae MLV-016] gi|225724676|gb|ACO20528.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae P1031] gi|306409394|gb|ADM84821.1| Exonuclease VII, large subunit [Streptococcus pneumoniae AP200] Length = 446 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|210615788|ref|ZP_03290769.1| hypothetical protein CLONEX_02987 [Clostridium nexile DSM 1787] gi|210150124|gb|EEA81133.1| hypothetical protein CLONEX_02987 [Clostridium nexile DSM 1787] Length = 407 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 127/362 (35%), Positives = 195/362 (53%), Gaps = 13/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSV +++ ++K++ + + + V+GE+S + H+SGH YFSLKD I I++ Sbjct: 3 RNVYSVGQVNAYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGMIACIMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F EG + +V+G ITT+ KYQ+ + +I G+G L E K++L E Sbjct: 62 AGQRGGLPFRMREGQQVIVLGNITTYERDGKYQLYAKEIILDGAGALYERFEALKQELGE 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F++++K PIP + I V+T+PTGA IRDI+ R P ++++++P VQG+ Sbjct: 122 MGMFAEEYKQPIPKFARTIGVVTAPTGAAIRDIINVAGRRNPYVQLLLYPALVQGEGAAA 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I L D+II+ RGGGSIEDLW FN+E++ RAI IP+ISA+G Sbjct: 182 SIVEGIAAL-------EKKGVDLIIVGRGGGSIEDLWAFNEEIVARAIFECRIPVISAVG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+ADY ADLRAPTP+ AAE+AV E + + ++ I + +++ Sbjct: 235 HETDTTIADYVADLRAPTPSAAAELAVFEYETFLNGVEEYRIKIRKAIHQKAEWEKIKTG 294 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + L + R L L +E I K R F I R+K + + Sbjct: 295 QYALKLKYLHPQNKLRDKQQRTVELEERLRQTMERKIDDKKRRFGFYIERMKGLSPLAKL 354 Query: 367 QK 368 + Sbjct: 355 NQ 356 Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 40/127 (31%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 I+ H + + + K L + +N++ +L R+ + KI Sbjct: 275 RIKIRKAIHQKAEWEKIKTGQYALKLKYLHPQNKLRDKQQRTVELEERLRQTMERKIDDK 334 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 ++ + L +G+ + N + + A + + DG A V Sbjct: 335 KRRFGFYIERMKGLSPLAKLNQGFAYVSTENGKVVKTIADTANGETLNVYVTDGVIKARV 394 Query: 499 INKAPPK 505 + + Sbjct: 395 EDTHKEE 401 >gi|225870047|ref|YP_002745994.1| exodeoxyribonuclease VII large subunit [Streptococcus equi subsp. equi 4047] gi|225699451|emb|CAW92955.1| putative exodeoxyribonuclease VII large subunit [Streptococcus equi subsp. equi 4047] Length = 451 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 135/494 (27%), Positives = 222/494 (44%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV++L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 10 LSVTQLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEGAVIQATMWAGA 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G+I + + Y +IIE P G G L E+ ++KL EG Sbjct: 68 YKKLGFDLEEGMKLNVVGRIQLYEPNGSYSMIIEKAEPDGIGALALQFEQLRQKLAGEGF 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++HK +P + ++TSP+GAVIRDI+ IS RFP + +++FP KVQG+ +E+A Sbjct: 128 FDERHKQALPQFVTKVGIVTSPSGAVIRDIITTISRRFPGVSILLFPTKVQGEGAAQEVA 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++V+AI S +P+IS++GHET Sbjct: 188 ANITKANQRED------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESRLPVISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ AD RA TPT AAE+A P+ + S I + + + L Sbjct: 242 DTTLADFVADRRAATPTAAAELATPITKTDIVSWIAEQQSRSYQACLRYIRQGQERVDKL 301 Query: 312 KA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ RLDRL L + + + + +R+ S + +++ Sbjct: 302 SYSVIFRQPERLYDAYSQRLDRLTTSLMTTFKETLSGAKQEHLILEHRLASVNVQARLER 361 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + + Sbjct: 362 YQDRLATAHRLLIANMTNQYDSKLAGFER------------------------------- 390 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY ++ + +++ + I Sbjct: 391 ----------------AQAALLSLDTSRIIARGYALLK-KDGVVAACVKDIKKGDHLSII 433 Query: 489 FFDGQANAIVINKA 502 DGQ V + Sbjct: 434 MRDGQLEVEVEDVN 447 >gi|148989226|ref|ZP_01820606.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP6-BS73] gi|149002573|ref|ZP_01827505.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP14-BS69] gi|168486530|ref|ZP_02711038.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC1087-00] gi|237649508|ref|ZP_04523760.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae CCRI 1974] gi|237822540|ref|ZP_04598385.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae CCRI 1974M2] gi|147759184|gb|EDK66177.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP14-BS69] gi|147925204|gb|EDK76283.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP6-BS73] gi|183570424|gb|EDT90952.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC1087-00] Length = 446 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|328955334|ref|YP_004372667.1| Exodeoxyribonuclease VII large subunit [Coriobacterium glomerans PW2] gi|328455658|gb|AEB06852.1| Exodeoxyribonuclease VII large subunit [Coriobacterium glomerans PW2] Length = 494 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 115/506 (22%), Positives = 199/506 (39%), Gaps = 34/506 (6%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS+ +E + + V GE++G+RG SGH YF +KD + +D IIW+G Sbjct: 18 LTVSQAVQRASDALE-TIPSLTVIGEVTGFRGPNARSGHCYFQIKDEAAAVDCIIWRGAY 76 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K +G++ G + + + S +G G L + +KL EGL Sbjct: 77 AKRPVDLRDGMQAQFTGAFNLYKPQGRMSFVARSFALAGEGLLRQQVAALAEKLRREGLM 136 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K PI +AV+TS +GAVI D+ + + R P + +I KVQG+ E+ Sbjct: 137 EEARKRPIAAFCSRVAVVTSLSGAVIDDVKRTLRRRNPLVELICVGAKVQGEGAADELIE 196 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + + T P PD I+L RGGGS EDL FNDE + RA+A S +P+++ IGHE D Sbjct: 197 GL-----RRAASTRPAPDCILLVRGGGSFEDLMTFNDERLARAVAGSPVPVVTGIGHEPD 251 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 ++ D +D RA TPT AAE P L L + E R+ + ++ Sbjct: 252 TSICDMVSDRRASTPTAAAESVAPDMSDLIEVLSSREHRIALAMAARVRTAAKECAM--- 308 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + + + R + R + + R Sbjct: 309 ------------------LEQRDRRAISGYLDRAQMTLSAWAARPCLLDPTQIVDRRRSE 350 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + Q + + +A L +++ +R+ + +R+ + Sbjct: 351 LAQTSDRLAQALV----RAQARYDDDLARLVPRFKESASRLSDRRHELVLSASRLSHVGR 406 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + ++ L + + L RGY+ + + + DG Sbjct: 407 DALADARSGLASDAASLDALSPLAVLARGYSIAYGDAG-VAGSIELFSAGDEMRLRMVDG 465 Query: 493 QANAIVINKAPPKEQPTKKCQLHNNK 518 + A V + +P + Sbjct: 466 ELAATVTSVSPGEACSDGSSPAAPRS 491 >gi|325694103|gb|EGD36021.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK150] Length = 446 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 157/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IPIIS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRFQEQTDQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|301794296|emb|CBW36720.1| putative exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae INV104] Length = 446 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|225860954|ref|YP_002742463.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae Taiwan19F-14] gi|298230894|ref|ZP_06964575.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254305|ref|ZP_06977891.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502794|ref|YP_003724734.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae TCH8431/19A] gi|254783715|sp|C1CR91|EX7L_STRZT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|225727701|gb|ACO23552.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae Taiwan19F-14] gi|298238389|gb|ADI69520.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae TCH8431/19A] Length = 446 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGNYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|269836820|ref|YP_003319048.1| exodeoxyribonuclease VII, large subunit [Sphaerobacter thermophilus DSM 20745] gi|269786083|gb|ACZ38226.1| exodeoxyribonuclease VII, large subunit [Sphaerobacter thermophilus DSM 20745] Length = 414 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 120/369 (32%), Positives = 208/369 (56%), Gaps = 12/369 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 V++++ ++K +++++ LS V +RGE+S + ++GH YF+LK +++ ++++G Sbjct: 3 ILDVADVTAYIKDLLDADPILSDVWIRGEVSNFV-RSAAGHIYFTLKSERAQLRCVLFRG 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F PE G L G+++ + +YQ+ ++ + P G+G L E+ +++L EG Sbjct: 62 NARWLTFQPENGDAILAHGRVSVYEAGGQYQLYVDLIQPEGTGLLHLQFEELRRRLEMEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 LF K P+P +P+ I V+TSPTGAV DI + R+PL +++ P +VQG++ P I Sbjct: 122 LFDPSRKRPLPRLPRRIGVVTSPTGAVWHDIQTVLRRRYPLAELVLAPAQVQGEDAPPTI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ L + D+II+ARGGGS+EDLW FNDE + RA+ S IP+ISA+GHE Sbjct: 182 IRALEAL------QLDGNVDVIIIARGGGSMEDLWCFNDEALARAVFASRIPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+ D+ AD+RAPTP+ AAE+ P L + + L AR NN + +++ T++ L Sbjct: 236 TDYTICDFVADVRAPTPSAAAEIVAPHINELAAEVTGLLARANNALWEILRDCRETVDGL 295 Query: 311 LKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + R RLD + +L I + I ++ + +++ Sbjct: 296 ALRLQRHGPENLIRQERLRLDNRAEIMHQHLRRRIASQRAAIEAIQRQLDLLHPLGVMRR 355 Query: 369 NRQHILEKQ 377 +L++ Sbjct: 356 GYAIVLDRA 364 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 44/141 (31%), Gaps = 2/141 (1%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + + + ++ + L+ +N I + + L +I S Sbjct: 274 LARANNALWEILRDCRETVDGLALRLQRHGPENLIRQERLRLDNRAEIMHQHLRRRIASQ 333 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAI 497 ++ R L ++RGY + D + + L + + F DG+A A+ Sbjct: 334 RAAIEAIQRQLDLLHPLGVMRRGYAIVLDRATGERLRSVKGLTVDQEVTLEFHDGEAGAV 393 Query: 498 VINKAPPKEQPTKKCQLHNNK 518 V + + + Sbjct: 394 VRSVETSRGAEHVHTPAETQR 414 >gi|194397974|ref|YP_002037811.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae G54] gi|225858992|ref|YP_002740502.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae 70585] gi|226697614|sp|B5E4U5|EX7L_STRP4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783710|sp|C1C7H6|EX7L_STRP7 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|194357641|gb|ACF56089.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae G54] gi|225722101|gb|ACO17955.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae 70585] Length = 446 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|261855049|ref|YP_003262332.1| exodeoxyribonuclease VII large subunit [Halothiobacillus neapolitanus c2] gi|261835518|gb|ACX95285.1| exodeoxyribonuclease VII, large subunit [Halothiobacillus neapolitanus c2] Length = 501 Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats. Identities = 131/489 (26%), Positives = 229/489 (46%), Gaps = 17/489 (3%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV+ L+ K I+E+NLS V V+GE+ +SGH YFSLKD + + +++G Sbjct: 4 ILSVTSLNAMAKQILEANLSGVMVQGEVRSLT-RAASGHMYFSLKDQQAEVRCALFRGQA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++ G +V G ++ + YQ+I+ + +G G L E KKKL EGLF Sbjct: 63 MRVKTAFANGDAVVVRGSVSLYAPRGDYQLIVTGVELAGDGQLAVLFEALKKKLFAEGLF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K IP + + I VI+S GA ++D+L ++ R P + + + PV VQG+ E+ Sbjct: 123 DAARKRAIPTLSRRILVISSAAGAALQDVLSTLTRRLPLVEINLVPVAVQGEAAAAELTA 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ + + E D+++L RGGGS+ DLW FNDE + RAIA +P+IS +GHE D Sbjct: 183 AVRGITSDSE------FDVVLLVRGGGSMSDLWAFNDEGLARAIAACPVPVISGVGHEID 236 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL-NNIIIRLIKYKINTLNSLL 311 +T++D+ AD RA TPT AAE+A P+ + + L+ + +I + L+S L Sbjct: 237 FTISDFVADARAATPTAAAELATPITLGELQAALVLQQEQLSRLIEDRLNAAGQRLDSSL 296 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L Q + L L+ + + +R++ +H +++N Sbjct: 297 NRLRQQRQRWLPQGHHQMMLSLRLQRAIRARWQDNLGQIRALTHRLQQRSPVHWVRQNHS 356 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + + ++Q + Q L A L L +I + +++ + Sbjct: 357 RLEQMRWRLQQAIDQRLAAQRQNNLRLAAGLRPLI--VLRQIELRQQNSQRITAHLHAAA 414 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR---NLATKTR---I 485 ++ + +L + + + L+RGY+ ++ + LA R + Sbjct: 415 RQRLVRQQQRLEQAFGVLSALSPQRVLERGYSLVEAESGLLWHAAALQSALAESDRPLPL 474 Query: 486 LINFFDGQA 494 ++F DG Sbjct: 475 RLHFGDGVV 483 >gi|332200656|gb|EGJ14728.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae GA41317] Length = 446 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+E + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEEAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|168484959|ref|ZP_02709904.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC1873-00] gi|168493129|ref|ZP_02717272.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC3059-06] gi|221231908|ref|YP_002511060.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae ATCC 700669] gi|225854679|ref|YP_002736191.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae JJA] gi|254783711|sp|B8ZQ76|EX7L_STRPJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783713|sp|C1CEH0|EX7L_STRZJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|172041912|gb|EDT49958.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC1873-00] gi|183576657|gb|EDT97185.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC3059-06] gi|220674368|emb|CAR68917.1| putative exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae ATCC 700669] gi|225722643|gb|ACO18496.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae JJA] Length = 446 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|331266227|ref|YP_004325857.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis Uo5] gi|326682899|emb|CBZ00516.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis Uo5] Length = 446 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 149/500 (29%), Positives = 231/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQGD + Sbjct: 120 EGLFQERFKQPLPQFSKKIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N ++ D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + ++ + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLTHLQNQEKRMATAVQNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ I Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPITK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRGQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-TVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|324990649|gb|EGC22585.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK353] Length = 446 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 156/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IPIIS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|327458745|gb|EGF05093.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK1057] Length = 446 Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 155/500 (31%), Positives = 234/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLDRVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQG Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|308234514|ref|ZP_07665251.1| exodeoxyribonuclease VII, large subunit [Atopobium vaginae DSM 15829] gi|328944108|ref|ZP_08241573.1| exodeoxyribonuclease VII large subunit [Atopobium vaginae DSM 15829] gi|327492077|gb|EGF23851.1| exodeoxyribonuclease VII large subunit [Atopobium vaginae DSM 15829] Length = 450 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 128/493 (25%), Positives = 203/493 (41%), Gaps = 56/493 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIW 69 + SV + + V + +CV GE+SGYRG SGH YF LKD S +D I+W Sbjct: 3 NAKPISVCDAVAQAQSCV-KTMPSLCVNGEVSGYRGPNARSGHCYFQLKDAQSSMDVIMW 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + T N F ++G++ V G + S K +I S +G G L + + KKL Sbjct: 62 RSTFNACNFQMKDGLQLEVRGSFNIYGASGKLSFVITSAHVAGEGLLRLQVAQLAKKLEA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGL SD K IP I V TS +G+VI D+ + ++ R P + + VQG + P Sbjct: 122 EGLMSDARKRSIPRFCSRIVVCTSLSGSVIEDVKRTLARRNPLVEIQAVGCSVQGAQAPA 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I A+ +PD I+L RGGGS EDL FNDE + RA+A S IP+I+ IG Sbjct: 182 TICRALAIA-------AQAKPDAILLVRGGGSFEDLMCFNDESVARAVAASPIPVITGIG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D ++ D +D R TPT AAE P + +Q + + RL + Sbjct: 235 HEPDTSICDLVSDRRTSTPTAAAESVAPAFDEVQGQIWERQRRLAQAM------------ 282 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L R ++ L + + + + +HI +R I + Sbjct: 283 ---------SAILKAQRANIESLSQSANRVIHSKLAETKVYLDHISSRKCLTSPDAFISE 333 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + + I L R Sbjct: 334 KQTSLELTAERLFAAMP-------------------------RDISRFRERTTPLFMRFN 368 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ ++S+ + L + + +L RGY+ +Q + + ++ ++ RI I Sbjct: 369 KAGESFLQPYKHALSLYAQALDTLSPLKSLARGYSIVQADDGHVVSSALDVNVGDRIAIM 428 Query: 489 FFDGQANAIVINK 501 G +A V + Sbjct: 429 LGTGSVHASVSDI 441 >gi|289805293|ref|ZP_06535922.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 252 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 116/259 (44%), Positives = 162/259 (62%), Gaps = 8/259 (3%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 +S L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ +++ + ++ Sbjct: 1 LSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCAMFRNSNRRV 59 Query: 77 EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136 F P+ G + LV IT + YQII ES+ P+G G L E+ K KL EGLF Q Sbjct: 60 TFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKLHAEGLFDQQ 119 Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAIL 195 HK P+P + VITS TGA + DIL + R P L VII+P VQGD+ P +I AI Sbjct: 120 HKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIE 179 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255 NT E D++I+ RGGGS+EDLW FNDE + RAI S IP++SA+GHETD T+ Sbjct: 180 LANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTI 233 Query: 256 ADYAADLRAPTPTGAAEMA 274 AD+ ADLRAPTP+ AAE+ Sbjct: 234 ADFVADLRAPTPSAAAEIV 252 >gi|332363437|gb|EGJ41220.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK355] Length = 446 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 156/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|325688240|gb|EGD30259.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK72] Length = 446 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A P+ + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPITKLELLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGYLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|322376509|ref|ZP_08051002.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M334] gi|321282316|gb|EFX59323.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M334] Length = 446 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 151/500 (30%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLAE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQGD + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGSAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDILAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +R+ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARKHRLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLAQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + I NL K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKED-SVIDSVENLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|153953853|ref|YP_001394618.1| exodeoxyribonuclease VII large subunit [Clostridium kluyveri DSM 555] gi|219854468|ref|YP_002471590.1| hypothetical protein CKR_1125 [Clostridium kluyveri NBRC 12016] gi|189037849|sp|A5N7I9|EX7L_CLOK5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783697|sp|B9E101|EX7L_CLOK1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|146346734|gb|EDK33270.1| XseA [Clostridium kluyveri DSM 555] gi|219568192|dbj|BAH06176.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 400 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 122/359 (33%), Positives = 204/359 (56%), Gaps = 12/359 (3%) Query: 15 YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS+++ ++K ++++ + V+GE+S ++ HSSGH YFSLKD S+I+ I++K + Sbjct: 6 LTVSDINRYIKKTLDNDFILGNCSVKGEVSNFKF-HSSGHMYFSLKDKFSKINCIMFKSS 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + K+ F+P +G++ +V G+I+ + YQ+ + P G G L A EK K +L ++GL Sbjct: 65 VEKLNFMPGDGMKVIVKGRISLYEKEGVYQLYCSEMKPDGMGELYLAFEKLKIELEKKGL 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191 F HK IP K I VITSPTGA ++DI+ R + ++I+P VQG I Sbjct: 125 FDISHKKKIPLYAKKIGVITSPTGAAVKDIINVTRRRNKKIELLIYPSLVQGTGASDNII 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N++++ ++II+ARGGGSIE+LW FNDE + A+ +S PII+ +GHE Sbjct: 185 KGIETFNSMED------VELIIIARGGGSIEELWCFNDEKLAEAVYSSKKPIITGVGHEI 238 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ D+ +D+RAPTP+ AAE+ V E ++N + +L N + + K N L + Sbjct: 239 DYTIVDFVSDMRAPTPSAAAEIGVFSLEEYVQKILNYKNKLYNSVKNTVNDKKNRLAFVK 298 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 K L N ++ +D++ L +++II K I + + ++ + K Sbjct: 299 KTLEVNNPLTYIANEYENIDKIKESLNFKIKVIINGKKEKLGKINALLSAHNPLNILNK 357 Score = 76.7 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 2/134 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ Q IL + + VK + L + I + +I K+ Sbjct: 265 LEEYVQKILNYKNKLYNSVKNTVNDKKNRLAFVKKTLEV--NNPLTYIANEYENIDKIKE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + F + I + +L + N L +GY I+D N I+ L K ++ Sbjct: 323 SLNFKIKVIINGKKEKLGKINALLSAHNPLNILNKGYCIIEDEQKNVISSIEELNKKYKV 382 Query: 486 LINFFDGQANAIVI 499 I DG + +I Sbjct: 383 DIIMKDGTSKVELI 396 >gi|258405881|ref|YP_003198623.1| exodeoxyribonuclease VII, large subunit [Desulfohalobium retbaense DSM 5692] gi|257798108|gb|ACV69045.1| exodeoxyribonuclease VII, large subunit [Desulfohalobium retbaense DSM 5692] Length = 455 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 119/504 (23%), Positives = 212/504 (42%), Gaps = 58/504 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +SV EL+ +K +VE V VRG++S SGH YF+LKD +++ + +KG Sbjct: 4 VFSVQELTQAVKGVVEGQFPLVWVRGQVSNL-SRPGSGHIYFTLKDELAQLKVVWFKGNQ 62 Query: 74 NKIEF--LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + G E + G+++ +P YQ+I E + G G L A E K+K+ +G Sbjct: 63 WQTPALESLHNGQEIVCAGRLSVYPPQGTYQLIAEWVQDQGIGRLQAAFEALKQKMEAKG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190 F+ K P+P P+ +AV+T+P GA +RD L+ R P + I+P +QG+ + Sbjct: 123 YFAQDRKRPLPPHPQRVAVVTAPQGAAVRDFLRLAGERGRPAAIRIYPSLMQGEGAEDNV 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ Q+ + +++++ RGGGS+EDLW FN E + A+A+ +P ++AIGHE Sbjct: 183 IGALEQVQLDEWA------EVVVITRGGGSLEDLWTFNTEAVAEAVAHFPLPTVAAIGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T+ D AD RA TP+ AA++ P+++ L + E RL+ + ++ L Sbjct: 237 RDVTIVDLIADSRAATPSHAAQLVWPLRQELVQEVDEWEMRLDKAWMVQWRHAQRRFAEL 296 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 K L + R + + + + + Q+ Sbjct: 297 EKGLGWLSP--------------------RRRLQRMDKECHRLGHALVRTGRRFVTQQES 336 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + ++ + R + L R N + + Sbjct: 337 RAHDSSEALLHRVRRHFGRTATERLEHAGRRLLHCRSNHFNAVAH--------------- 381 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINF 489 + I T L K L+ G++ + + +T +A + + + Sbjct: 382 ----------RLEIQTSALAHLDPKAPLRHGFSLVSRVDTGELVTSAAQVAPEDFLQVQT 431 Query: 490 FDG--QANAIVINKAPPKEQPTKK 511 DG + A + A Q T+ Sbjct: 432 GDGAYRVRATAGDTAASSGQETET 455 >gi|324995300|gb|EGC27212.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK678] Length = 446 Score = 294 bits (752), Expect = 3e-77, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 234/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQG Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|296136139|ref|YP_003643381.1| exodeoxyribonuclease VII, large subunit [Thiomonas intermedia K12] gi|295796261|gb|ADG31051.1| exodeoxyribonuclease VII, large subunit [Thiomonas intermedia K12] Length = 448 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 136/486 (27%), Positives = 224/486 (46%), Gaps = 58/486 (11%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 ++VS L + + + + VRGEISG +SGH YF+LKD +++ + ++ Sbjct: 2 WTVSALVQAFSDALNARFNSLSVRGEISGLV-RAASGHQYFNLKDGTAQLRCVWFRQRAG 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +G+ + + + Q+I+ES+ P G G LL A + K KL EGLF Sbjct: 61 SAATALRDGMSVRLRATVAIYEPRGDLQLIVESVQPDGEGALLEAFLRLKAKLQIEGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K P+P +P+ + VITS A +RD+L + R P +RV+++P VQG P E+ A Sbjct: 121 SERKRPLPALPQAVGVITSLQAAALRDVLTTLRRRSPHVRVVVYPASVQGAAAPGELLAA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + +E D+I+L RGGGS++DLW FNDE + RAIA S++P+IS +GHETD+ Sbjct: 181 LQRAQARRE------VDLILLVRGGGSLDDLWAFNDEALTRAIAASTLPVISGVGHETDF 234 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TLAD+ ADLRAPTPT AAE+ VP + L +L + R ++ + R ++ + + L Sbjct: 235 TLADFVADLRAPTPTAAAELGVPAQAALLDALTHTAHRASSALSRHLQREQQRCDRLALR 294 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 P L+ + L +L L L + + + +R+ + L+ + R+ + Sbjct: 295 WPQPAALLATPQRHLAQLQWRLRQALNDLSRLHAQRLQLLQHRL-AHALLQRAPRERERL 353 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ + + + I R++ H Sbjct: 354 NRCERGLPEAL--------------------------------SRQISNSQLRLDRAAQH 381 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 LQ + + TL RGY + N + LA + +L D Q Sbjct: 382 ---------------LQLLSPRATLARGYLLGMNANGQVLRDLTQLAPQQPLL--LADAQ 424 Query: 494 ANAIVI 499 + Sbjct: 425 RAVRID 430 >gi|327489515|gb|EGF21308.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK1058] Length = 446 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P VQG Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTNVQGVGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IPIIS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|163816788|ref|ZP_02208151.1| hypothetical protein COPEUT_02978 [Coprococcus eutactus ATCC 27759] gi|158448045|gb|EDP25040.1| hypothetical protein COPEUT_02978 [Coprococcus eutactus ATCC 27759] Length = 424 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 121/495 (24%), Positives = 210/495 (42%), Gaps = 81/495 (16%) Query: 12 HPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + Y+V EL+ ++ ++ E L ++CV GEI+G+ G GH YFSLKD+ I A+++ Sbjct: 4 NNIYTVQELNRRIQDLISGEPWLGNLCVEGEITGF-GRDKKGHCYFSLKDSSGVISAVMF 62 Query: 70 KGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 G + F P+ G + G++ + KYQ+ ++ L+ G G + L+K KL Sbjct: 63 AGKQRYGLGFTPKNGDKVHAFGRVEVYVRDGKYQLYVDRLVRVGDGEVNANLQKLIAKLE 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 GLFS ++K PIP P+ I V+T+ A I DI + R P ++ +P VQG Sbjct: 123 GMGLFSQEYKKPIPRYPRKIGVVTAGNKAAISDICKVAKTRDPYAQLYCYPATVQGQYAA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +I+ I L+ + D+II+ RGGGS EDLW FN+E + AI N+ PII+A Sbjct: 183 ADISRGIEILDGM-------GMDVIIVGRGGGSAEDLWAFNEEQVAWAIFNAETPIITAT 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+AD AD R P+ A A+PV + S Sbjct: 236 GHEIDTTVADMVADKRESNPSTAVMHALPVVKETVSEFEQRY------------------ 277 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 ++ ++ + + R+ + +++ + Sbjct: 278 -------------------------LYIKALMDNRMEKYRRNLDGYARQLRLLSPEAQLG 312 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 R+ + Q+ ++ ++ R+ H +++ R+ Sbjct: 313 AQREKLDRLQETMKSLM-------------------------SARLSSAHDRCERMSERL 347 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 E + K + ++++ T L + L G+ I + +T ++ + I I Sbjct: 348 EGGMYRKYELRLNALAVMTERLHGLSPTAKLVNGFGYIASAD-QPVTSVGDVEPGSDIEI 406 Query: 488 NFFDGQANAIVINKA 502 DG+ A V + Sbjct: 407 TVHDGKILASVTDIN 421 >gi|327461662|gb|EGF07993.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK1] Length = 446 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 155/500 (31%), Positives = 234/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQG Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IPIIS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|307706649|ref|ZP_07643456.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK321] gi|307618104|gb|EFN97264.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis SK321] Length = 446 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 150/500 (30%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQPLPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGSAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESCLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLTHLQNQEKRMSTAVRNVLAKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +R+ + Sbjct: 294 KKCSQSVIFRQPERLYDGYMQRLDQLQLRLKQSLRTQISDNKQLVQTRTHRLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLSQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + NL K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-LVVDSVENLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|160872586|ref|ZP_02062718.1| exodeoxyribonuclease VII, large subunit [Rickettsiella grylli] gi|159121385|gb|EDP46723.1| exodeoxyribonuclease VII, large subunit [Rickettsiella grylli] Length = 397 Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats. Identities = 125/356 (35%), Positives = 201/356 (56%), Gaps = 8/356 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 YS+SEL+ ++ ++E + V GE+S + +SGH YFSLKD +++ ++KG Sbjct: 6 IYSISELNQMVQTLLEDAFLPIWVEGEVSNF-ASPNSGHWYFSLKDEKAQVRCALFKGKQ 64 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + L + G++ L KI+ +P ++Q+II+ +G G L E+ K +L +GLF Sbjct: 65 LYKDNLLKNGMQILARAKISLYPTRGEFQLIIDQFESTGEGMLRKTFEQLKAQLKAQGLF 124 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +HK P+P P+ I +I+S TGA +RDI + RFP ++VI++P VQG ++ Sbjct: 125 DLKHKKPLPQFPRTIGIISSETGAALRDICVVLKKRFPAIQVILYPSLVQGKNAGMQLVE 184 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N KE D++ILARGGG++EDLW FN+E + RAI S +P+ISA+GHETD Sbjct: 185 QIKTANQRKE------CDLLILARGGGTLEDLWPFNEECVARAIFKSKLPLISAVGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ AD RA TPT AA++A P Q L ++ RL +I L+K L +L K Sbjct: 239 FTIADFVADKRAATPTMAAQLASPDGCEYQRRLDSINQRLIKLIGSLLKNNHLYLENLAK 298 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + Q L S D L + L ++ ++ + + + + + + ++ + Sbjct: 299 RLRHPQQRLQASFQHCDELAQRLHLSINRQLYLYEQKLSSLSRTLHAVSPLASLAR 354 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 49/133 (36%), Gaps = 5/133 (3%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + ++ + Q + +++ L+ L + L + R+ H +L R+ Sbjct: 266 EYQRRLDSINQRLIKLIGSLLKNNHLYLENLAKRL----RHPQQRLQASFQHCDELAQRL 321 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRIL 486 ++ ++ +S +R L + + +L RGY ++D + + + + I Sbjct: 322 HLSINRQLYLYEQKLSSLSRTLHAVSPLASLARGYAIVRDATSQKILRNSKKVKLGQEIT 381 Query: 487 INFFDGQANAIVI 499 G+ V Sbjct: 382 TKLAKGELLCEVK 394 >gi|206602069|gb|EDZ38551.1| Exodeoxyribonuclease VII large subunit [Leptospirillum sp. Group II '5-way CG'] Length = 503 Score = 293 bits (751), Expect = 4e-77, Method: Composition-based stats. Identities = 129/478 (26%), Positives = 227/478 (47%), Gaps = 14/478 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 ++VSEL+ + +E V GE+S + SSGHAYF+LKD+ S+I + ++G Sbjct: 16 VFTVSELTEGIGLAIEGAFPGFLHVEGEVSNLKES-SSGHAYFTLKDSSSQIRGVFFRGQ 74 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 FLP +G + L G++T + +YQI++ ++ P+G G + + KL EEGL Sbjct: 75 RRNDRFLPRDGDQVLATGRLTLYRPRGEYQIVVHAMEPAGIGKFFLEFRRVQHKLQEEGL 134 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 K P+P P IA++TS GAV+ D L+ R P + ++I PV+VQG+ ++I Sbjct: 135 LRADRKRPLPSYPFKIALVTSLKGAVVWDFLRIAESRNPSVSIVILPVRVQGEGAVEDIV 194 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 +A+ Q E D +++ARGGGSIEDLW FN E + R I + +P++SA+GHET Sbjct: 195 DALTQRIPRLEA-----LDAVVIARGGGSIEDLWPFNSERLARTILSCPVPVVSAVGHET 249 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 + T+AD +DLR TP+ AAE VP LQ + RL ++++ ++ + Sbjct: 250 NVTIADLVSDLRVATPSEAAEKLVPHSGELQRRIKGAFDRLTHVLLNELRKENLRYFRAR 309 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + R +R L +E I R++ H +++ R Sbjct: 310 DRLFLWPHQIVSCHQRRERSEGRLISIVERKNHAFSMERQEIHQRLEQTV-FHLLRQKRA 368 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + I K L+++ + ++ L+ + + R+ + Sbjct: 369 FLEKTASRI----KTPYALYVLKRERQESLKGRLQANIARVFSVSSRSREGVQERLLKSM 424 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL-ATKTRILIN 488 S++++ + T LQ+ + L++G+ + ++ + L + +L Sbjct: 425 SNRLEEFRSIHRKLTERLQAATPFSALEKGFAILFHAHDRTLVSPARLPHSGEILLAR 482 >gi|332361750|gb|EGJ39554.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK1056] gi|332366066|gb|EGJ43822.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK1059] Length = 446 Score = 293 bits (751), Expect = 4e-77, Method: Composition-based stats. Identities = 155/500 (31%), Positives = 234/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQG Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|317152622|ref|YP_004120670.1| exodeoxyribonuclease VII large subunit [Desulfovibrio aespoeensis Aspo-2] gi|316942873|gb|ADU61924.1| exodeoxyribonuclease VII, large subunit [Desulfovibrio aespoeensis Aspo-2] Length = 487 Score = 293 bits (751), Expect = 4e-77, Method: Composition-based stats. Identities = 119/538 (22%), Positives = 209/538 (38%), Gaps = 90/538 (16%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSEL+ +K ++E+ V VRG+++ +SGH YF+L D + + + ++ Sbjct: 4 ILTVSELTRSVKSLLEAEFPFVWVRGQVTNL-ARPASGHVYFTLTDGDAALSVVWFRSAQ 62 Query: 74 NKIEFL----------------------------------PEEGIEFLVIGKITTFPGSS 99 E + E G E L G++ + Sbjct: 63 RSAEPVSRGGERINPLTGEVEESDEGGAALVAGGSPGAGVLEGGQEVLCAGRLNVYEPRG 122 Query: 100 KYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVI 159 +YQ++ E + G G L A E K KL +G F + K +P P +AVITSP+GA I Sbjct: 123 QYQLVAELVQAQGVGDLAVAFEALKGKLAAQGYFDEARKLELPRDPARVAVITSPSGAAI 182 Query: 160 RDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218 RD L+ R + I+P VQG+ P++IA A+ ++ ++ +L RGG Sbjct: 183 RDFLRLAGERGTGGEIRIYPSLVQGERAPEQIAAALDLVDADGWA------EVAVLIRGG 236 Query: 219 GSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK 278 GS+EDLW FN E + AI + +P+++ +GHE D T+AD+ AD RA TP+ AA+ P + Sbjct: 237 GSLEDLWAFNTETVADAIFRARVPVVTGVGHEPDVTIADFVADRRAATPSHAAQELWPRR 296 Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 E L + LE L + K L +AL R Sbjct: 297 ETLAQRVDVLEMALGRAYAGWLLGKGTQFEQLRRALSWLSPAHRLER------------- 343 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +E + + ++ + R + Sbjct: 344 MEDRLLSLLPRLGEAGQGL------------------WRRRGRALAAGVDRLGRAFGIVR 385 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + R+ + ++ R +++ L+ + L Sbjct: 386 VDRTRDEVAALCRRMDRAVHALAEVRAR--------------DLAVLGATLRGLDPEAPL 431 Query: 459 KRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLH 515 +RGY+ ++ +F+ + + + I +G+ A+V P ++P + + Sbjct: 432 ERGYSLVRIERTGDFLRDPKEVTAGDALDIRIRNGRVAAVV--ALDPGQKPAQTREKE 487 >gi|124515825|gb|EAY57334.1| Exodeoxyribonuclease VII large subunit [Leptospirillum rubarum] Length = 503 Score = 293 bits (751), Expect = 4e-77, Method: Composition-based stats. Identities = 126/478 (26%), Positives = 223/478 (46%), Gaps = 14/478 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 ++VSEL+ + +E V GE+S + SSGHAYF+LKD+ S+I + ++G Sbjct: 16 VFTVSELTEGIGLAIEGAFPGFLHVEGEVSNLKES-SSGHAYFTLKDSSSQIRGVFFRGQ 74 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 FLP +G + L G++T + +YQI++ ++ P+G G + + L EEGL Sbjct: 75 RRNERFLPRDGDQVLATGRLTLYRPRGEYQIVVHTMEPAGIGKFFLEFRRVQHTLQEEGL 134 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 K P+P P IA++TS GAV+ D L+ R P + ++I PV+VQGD ++I Sbjct: 135 LRPDRKRPLPAYPFKIALVTSLKGAVVWDFLRIAGSRNPAVSIVILPVRVQGDGAVEDIV 194 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A + + D +++ARGGGSIEDLW FN E + R I + +P++SA+GHET Sbjct: 195 EAFTRSIPRIDA-----LDAVVIARGGGSIEDLWPFNSERLARTILSCPVPVVSAVGHET 249 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 + T+AD +DLR TP+ AAE VP LQ + RL ++++ ++ + Sbjct: 250 NVTIADLVSDLRVATPSEAAEKLVPHSGELQRRVKGAFDRLTHVLLNELRKENLRYFRAR 309 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + R +R L +E I R++ + H +++ R Sbjct: 310 DRLFLWPHQIVSFHQRRERSEGRLISIVERKNHSFSMERQEIHQRLEQ-SVFHLLRQKRA 368 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + I K L+++++ ++ L+ + R+ + Sbjct: 369 FLEKTASRI----KTPYALYVLKREKQESLKGRLQTSMARVFSFSSLRQGGGQDRLVKSM 424 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL-ATKTRILIN 488 ++++ + T LQ+ + L++G+ + + + L + +L Sbjct: 425 RNRLEEFRSMHRTLTERLQAATPFSALEKGFAILFHARDRTLVSPARLPHSGEILLAR 482 >gi|289167857|ref|YP_003446126.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis B6] gi|288907424|emb|CBJ22261.1| exodeoxyribonuclease VII, large subunit [Streptococcus mitis B6] Length = 446 Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMNFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQPLPQFSNRIGVVTSRSGAVIRDIITTVSRRFPGIDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQ------QDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + ++ + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLAHLQNQEKRMATAVQNVLSKKQESL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +R+ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHRLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DG+ V + + Sbjct: 426 TLLMRDGRVELEVKDVKTKE 445 >gi|171463109|ref|YP_001797222.1| exodeoxyribonuclease VII, large subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192647|gb|ACB43608.1| exodeoxyribonuclease VII, large subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 406 Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats. Identities = 125/377 (33%), Positives = 203/377 (53%), Gaps = 14/377 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ ++ SV +L+ + +E V V GEIS ++ SGH YFSLKD Sbjct: 1 MSEIPKQ------ILSVGDLNRAIAVSLEDRFDTVWVSGEISNFKSY-DSGHWYFSLKDE 53 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +I ++++G ++ F+P+ G V + + Q+ I++L +G G L A Sbjct: 54 EGQIRCVMFRGRNGQVSFMPQSGDLVEVSASLGMYVPRGDIQLTIQTLRRAGMGGLYEAF 113 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 K K KL +EGLF D+ K IP P+ I +ITSP A ++D+L ++ R P + ++I+P Sbjct: 114 LKLKAKLAKEGLFDDERKREIPTHPRSIGIITSPQAAALKDVLSTLARRAPQIPIVIYPT 173 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + P I +A+ D+I+L RGGGSIEDLW FNDE++ AIA+S Sbjct: 174 LVQGPDAPAGIISALKA------AEEENAVDVILLVRGGGSIEDLWAFNDELLAYAIADS 227 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP++S +GHETD+T+AD+ ADLRAPTPTGAAE+A P ++ + L + L I + Sbjct: 228 LIPVVSGVGHETDFTIADFVADLRAPTPTGAAELAAPRRDQMLQELNAIMQALLQRIYQR 287 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ + TL+ L L ++ R +++ + L + + R+ +H ++++ Sbjct: 288 VERETQTLDQLALRLSHALPNPDRMREQIEGWQKRLHQAWSVRMENWRRNQSHYQSQLEM 347 Query: 360 DFLIHNIQKNRQHILEK 376 +++ IL K Sbjct: 348 LNPQRTLERGYAVILNK 364 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 52/142 (36%), Gaps = 3/142 (2%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R +L++ I Q + Q + + + + L + + I+ R+ Sbjct: 265 RRDQMLQELNAIMQALLQRIYQRVERETQTLDQLALRLSHALPNPDRMREQIEGWQKRLH 324 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN---NFITQKRNLATKTRI 485 S ++++ + S L+ + TL+RGY I + ++ + + + L + Sbjct: 325 QAWSVRMENWRRNQSHYQSQLEMLNPQRTLERGYAVILNKDSEGLHAVRKPSELKVSSGY 384 Query: 486 LINFFDGQANAIVINKAPPKEQ 507 I +GQA + + Sbjct: 385 QIRLAEGQAEVQFSEVIQTESK 406 >gi|325690179|gb|EGD32183.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK115] Length = 446 Score = 293 bits (750), Expect = 5e-77, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQG Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGVGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ + + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAMSNRLTYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L +L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLQLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSACIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|322385055|ref|ZP_08058705.1| exodeoxyribonuclease VII large subunit [Streptococcus cristatus ATCC 51100] gi|321270965|gb|EFX53875.1| exodeoxyribonuclease VII large subunit [Streptococcus cristatus ATCC 51100] Length = 446 Score = 293 bits (750), Expect = 5e-77, Method: Composition-based stats. Identities = 159/494 (32%), Positives = 242/494 (48%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A IW G Sbjct: 5 LSVSTLTRYLKMKFDRDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATIWSGV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y I+IE P G G L E+ KKKL EEGL Sbjct: 63 YKKLGFELEEGMKVNVIGRVQLYEPSGSYSIVIEKAEPDGIGALAVQFEQLKKKLGEEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQG+ E+A Sbjct: 123 FQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAAEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N ++ D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 ANIRRANERED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESQIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV + L L + RL+N + Y+ L+ L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKLDLLGHLSQQQNRLSNAASNRLAYQRERLHKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LD+L L+ + + + N + +R++S + +Q+ Sbjct: 297 ASSVIFRQPERLYDGYLQKLDQLNLRLKQKIREYYNEEVQQVNILQHRLESLSPLRQVQR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ + ++++ + + + E K Sbjct: 357 YQEQVHQQERLLRSNMAVIYDHKVAEAKR------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + L + RGY IQ N I +++ K ++ I Sbjct: 386 ----------------LSDALLMLDTSRIVARGYAIIQ-KNETVIESSQDIKKKDQLTIL 428 Query: 489 FFDGQANAIVINKA 502 DGQ V + Sbjct: 429 MRDGQVQVEVKDVK 442 >gi|168491128|ref|ZP_02715271.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC0288-04] gi|183574389|gb|EDT94917.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae CDC0288-04] Length = 446 Score = 293 bits (750), Expect = 5e-77, Method: Composition-based stats. Identities = 147/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL+E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLIE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQ------WDDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNRQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAETKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V N + Sbjct: 426 TLLMRDGQVELEVKNVKTKE 445 >gi|145588475|ref|YP_001155072.1| exodeoxyribonuclease VII, large subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046881|gb|ABP33508.1| Exodeoxyribonuclease VII large subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 408 Score = 293 bits (750), Expect = 5e-77, Method: Composition-based stats. Identities = 125/393 (31%), Positives = 202/393 (51%), Gaps = 9/393 (2%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SV +L+ + +E V V GEIS ++ SGH YFSLKD +I +++ Sbjct: 4 MTREILSVGDLNRAIAASLEDRFDTVWVSGEISNFKAY-DSGHWYFSLKDEEGQIRCVMF 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G ++ F+P+ G V + + Q+ I++L +G G L A K K KL + Sbjct: 63 RGRNGQVGFMPQSGDLVEVSASLGMYVPRGDIQLTIQTLRRAGMGGLYEAFLKLKAKLAK 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF + K IP P+ I +ITSP A ++D+L ++ R P + ++I+P VQG + Sbjct: 123 EGLFDEGRKREIPTHPRSIGIITSPQAAALKDVLSTLARRAPHIPIVIYPTLVQGPDASA 182 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I A+ D+I+L RGGGSIEDLW FNDE + AIA SSIP++S +G Sbjct: 183 GIIKALKA------AEKEQAVDVILLVRGGGSIEDLWAFNDEQLAYAIAQSSIPVVSGVG 236 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD+ ADLRAPTPTGAAE+A P K+ + L ++ L I + I+ + TL+ Sbjct: 237 HETDFTIADFVADLRAPTPTGAAELAAPRKDQMLQELEAIKQALLQRINQRIEREAQTLD 296 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L L ++ R ++ + L + + R+ + ++++ +++ Sbjct: 297 QLALRLSHALPNPDRMREQIAGWQQRLNQAWSVRMENWKRNQTYYQSQLEMLNPQRTLER 356 Query: 369 NRQHILEKQQ-HIEQIVKQHLRYIFLEKKEKIA 400 IL K+ + + + ++A Sbjct: 357 GYAVILNKENDQLHAVRNPAELNTQNTYQIRLA 389 Score = 86.0 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 6/169 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + + Q +E I + L+ I + + L Sbjct: 237 HETDFTIADFVADLRAPTPTGAAELAAPRKDQMLQELEAIKQALLQRINQRIEREAQTLD 296 Query: 404 MLREQTKNRI---FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 L + + + + I R+ S ++++ + + L+ + TL+R Sbjct: 297 QLALRLSHALPNPDRMREQIAGWQQRLNQAWSVRMENWKRNQTYYQSQLEMLNPQRTLER 356 Query: 461 GYTSIQDTNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 GY I + N + + L T+ I G+ + V A Sbjct: 357 GYAVILNKENDQLHAVRNPAELNTQNTYQIRLAGGRVDIRVAEVAKANS 405 >gi|25010611|ref|NP_735006.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae NEM316] gi|77414008|ref|ZP_00790180.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 515] gi|31563132|sp|Q8E6M1|EX7L_STRA3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|23094965|emb|CAD46186.1| Unknown [Streptococcus agalactiae NEM316] gi|77159934|gb|EAO71073.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 515] Length = 446 Score = 293 bits (750), Expect = 5e-77, Method: Composition-based stats. Identities = 146/493 (29%), Positives = 229/493 (46%), Gaps = 62/493 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD+ S I A +W G Sbjct: 5 LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGQ 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y II+E P G G L E+ KKKL + G Sbjct: 63 FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQSGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK IP + I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N D++I+ RGGGSIEDLW FN+E +V AI S +P+IS++GHET Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV + + S + E R+ +RLI+ K L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LD L ++L +++ + + + +++ L I Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHI 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ +++ ++ + + Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N+ ++ + + + Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428 Query: 489 FFDGQANAIVINK 501 DG V + Sbjct: 429 MQDGLLEVEVKDV 441 >gi|218512834|ref|ZP_03509674.1| exodeoxyribonuclease VII large subunit [Rhizobium etli 8C-3] Length = 239 Score = 293 bits (750), Expect = 5e-77, Method: Composition-based stats. Identities = 145/239 (60%), Positives = 186/239 (77%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + + EYSVSELS +K VE+ V VRGEISGYRG HSSGHAYF+LKD+ +RIDA+ Sbjct: 1 SPTNLAEYSVSELSGSIKRTVETAFDQVRVRGEISGYRGPHSSGHAYFALKDDRARIDAV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 IWKGT ++++F PEEG+E + GK+TTFPGSSKYQI+IE+L P+G+G L+ +E+RK+KL Sbjct: 61 IWKGTFSRLKFRPEEGMEVIATGKVTTFPGSSKYQIVIETLEPAGAGALMALIEERKRKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECP 187 EGLF K +PF+PK+I V+TSPTGAVIRDIL RIS RFP+ V+++PVKVQG+ Sbjct: 121 GAEGLFDAARKKRLPFMPKVIGVVTSPTGAVIRDILHRISDRFPVHVLVWPVKVQGEGAG 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 E+ANAI N L+ G RPD++I+ARGGGS+EDLW FNDE++VRA A S IP+ISA Sbjct: 181 DEVANAIRGFNALEPGGAIARPDVLIVARGGGSLEDLWSFNDEIVVRAAAESRIPLISA 239 >gi|312143728|ref|YP_003995174.1| exodeoxyribonuclease VII, large subunit [Halanaerobium sp. 'sapolanicus'] gi|311904379|gb|ADQ14820.1| exodeoxyribonuclease VII, large subunit [Halanaerobium sp. 'sapolanicus'] Length = 418 Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats. Identities = 129/371 (34%), Positives = 206/371 (55%), Gaps = 12/371 (3%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + Y+V E++ +L+ +++ + LS + GEIS + H SGH YF+LKD ++++ ++ Sbjct: 14 EKKIYTVQEITEYLQSLIKEDTLLSDFYITGEISNF-YHHGSGHMYFTLKDENTQLKTVM 72 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + ++F PE+G++ G + +P +YQ + +G G L A EK KK L Sbjct: 73 FKGYNSSLDFEPEDGMQVTARGNLDIYPQRGEYQFYAREMEEAGKGDLYAAYEKLKKALK 132 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EEGLF K IP + I ++TSPTGA IRDIL + R V+I P VQG + Sbjct: 133 EEGLFEADKKKEIPKLASKIGIVTSPTGAAIRDILSVMKRRSGDFSVLIVPTHVQGKQAA 192 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 EI AI LN+ D+II++RGGGSIEDLW FN+E +VRAI NS +P+IS + Sbjct: 193 GEIKQAIEYLNSR------DDIDLIIVSRGGGSIEDLWAFNEEEVVRAIYNSRLPVISGV 246 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE+D+ ++D+ ADLRAPTP+ AAE+A +E + L +L RL N +K K + Sbjct: 247 GHESDFCISDFVADLRAPTPSAAAELATANREEMLDKLKSLSQRLINTTSNELKQKQQKI 306 Query: 308 NSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S+ + ++ +LD L L + +E + +N + ++ S + Sbjct: 307 KSIAERRIFMRPEEIFRDYELKLDNLETTLNYQIEKQLKSWENKYNLLQQKLSSLSPLKT 366 Query: 366 IQKNRQHILEK 376 +++ + ++ Sbjct: 367 LERGYSILQDQ 377 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 59/140 (42%), Gaps = 2/140 (1%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITR 426 NR+ +L+K + + Q + +K++KI + R + + + L T Sbjct: 276 NREEMLDKLKSLSQRLINTTSNELKQKQQKIKSIAERRIFMRPEEIFRDYELKLDNLETT 335 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + ++KS ++ + L S + TL+RGY+ +QD + N+ + + Sbjct: 336 LNYQIEKQLKSWENKYNLLQQKLSSLSPLKTLERGYSILQDQTEKTVNSVDNIKSGDLLT 395 Query: 487 INFFDGQANAIVINKAPPKE 506 DG+A V + E Sbjct: 396 ARLIDGKAKLKVNSTEKAGE 415 >gi|306829641|ref|ZP_07462831.1| exodeoxyribonuclease VII large subunit [Streptococcus mitis ATCC 6249] gi|304428727|gb|EFM31817.1| exodeoxyribonuclease VII large subunit [Streptococcus mitis ATCC 6249] Length = 446 Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats. Identities = 149/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K PIP K I V+TS +GAVIRDI+ +S RFP + ++++P KVQGD + Sbjct: 120 EGLFQERFKQPIPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDLLLYPTKVQGDGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N ++ D++I+ RGGGSIEDLW FN+E++VRAI S +PIIS++G Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + ++ + + + Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDLLTHLQNQEKRMTTAVQNVLSRKKEVL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDSKHLVQVRTHQLVQLSPVPK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLAQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-TVVDSVEKLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|253576319|ref|ZP_04853649.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251844212|gb|EES72230.1| exodeoxyribonuclease VII, large subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 317 Score = 293 bits (749), Expect = 6e-77, Method: Composition-based stats. Identities = 123/281 (43%), Positives = 174/281 (61%), Gaps = 10/281 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 +V EL+ +++ +ES+ L+ V +RGEIS + HSSGH YF+LKD S Sbjct: 41 EAAPLDQQRILTVKELNRYIRMKLESDQVLTDVWIRGEISNFTH-HSSGHMYFTLKDADS 99 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 RI +I++ ++ F P+EG + G ++ + +YQ + + P G G+L A E+ Sbjct: 100 RIKSIMFASYNQRLPFRPKEGTRVIARGNVSVYERDGQYQFYVTHMQPDGVGSLYLAFEQ 159 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K+KL EGLF+ K P+P PK I V+TSPTGA +RDIL + R+P VI++PV V Sbjct: 160 LKQKLEAEGLFAPGRKRPLPRFPKTIGVVTSPTGAAVRDILTTLGRRYPQAAVILYPVLV 219 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG I AI LN + E D++I+ RGGGS+E+LW FN+E + RAI S+I Sbjct: 220 QGKGAAPSIVKAIRTLNAMGEA------DVLIVGRGGGSLEELWAFNEEQVARAIYESAI 273 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 P+ISA+GHETD+T+AD+ ADLRA TPT AAE+AVP L+ Sbjct: 274 PVISAVGHETDFTIADFVADLRAATPTAAAELAVPHTAELR 314 >gi|294669569|ref|ZP_06734636.1| hypothetical protein NEIELOOT_01470 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308482|gb|EFE49725.1| hypothetical protein NEIELOOT_01470 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 403 Score = 293 bits (749), Expect = 6e-77, Method: Composition-based stats. Identities = 128/399 (32%), Positives = 209/399 (52%), Gaps = 11/399 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ K+++E NL+ + + GE+S +SGH YFSLKD+H+++ ++KGT Sbjct: 10 LSVSELNRLAKNLLEDNLAGLWIAGEVSNLT-RAASGHYYFSLKDSHAQVRCAMFKGTAQ 68 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + +EG V G+I + ++QI + + G G L A E+ K L EGLF+ Sbjct: 69 RFP-ALKEGDHIEVCGRIGIYEARGEFQITVSEVRLKGLGRLYEAYERLKAVLQGEGLFA 127 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K P+P P+ I V+TS A +RD++ + R P + VI++P VQG + +IA A Sbjct: 128 AERKRPLPERPERIGVVTSLAAAALRDVVSTLKRRAPEIPVIVYPAAVQGADSAAQIARA 187 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + E D++I+ RGGGSIEDLW FN+E + RAIA IP++S +GHETD+ Sbjct: 188 VQTASERAE------CDVLIVCRGGGSIEDLWSFNEEPVARAIAACRIPVVSGVGHETDF 241 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TLAD+AAD+RAPTPTGAAE+ P + SL E RL + + ++ L + Sbjct: 242 TLADFAADVRAPTPTGAAELVSPNRAESLQSLRQAEGRLKETLRQRYYDASQKIDWLSRQ 301 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + + Q L R + + L R+L ++L+ + + ++ ++ + Sbjct: 302 IRHPRQKLDAQRVQAETLSRQLRYSLQTVCRFQRQNVARQSQLLRHLRPDTRQADAW--L 359 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + Q + + ++ + + + A R R Sbjct: 360 AQLQADLARGRRRIMADKAQLLENRPACCRPCRRSIFWR 398 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 12/105 (11%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 NR L+ + E +K+ LR + + +KI L + ++ + L ++ Sbjct: 265 NRAESLQSLRQAEGRLKETLRQRYYDASQKIDWLSRQIRHPRQKLDAQRVQAETLSRQLR 324 Query: 429 FILSHKIKSCHTSVSITTRILQSFAY------------KNTLKRG 461 + L + +V+ +++L+ + L RG Sbjct: 325 YSLQTVCRFQRQNVARQSQLLRHLRPDTRQADAWLAQLQADLARG 369 >gi|332203059|gb|EGJ17127.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae GA47901] Length = 446 Score = 292 bits (748), Expect = 7e-77, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 230/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R S H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKR--STHQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDALTHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + ++ + E K Sbjct: 354 IQRYQDRLGQLDKLLDSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|296110656|ref|YP_003621037.1| exodeoxyribonuclease VII, large subunit [Leuconostoc kimchii IMSNU 11154] gi|295832187|gb|ADG40068.1| exodeoxyribonuclease VII, large subunit [Leuconostoc kimchii IMSNU 11154] Length = 428 Score = 292 bits (748), Expect = 7e-77, Method: Composition-based stats. Identities = 148/507 (29%), Positives = 228/507 (44%), Gaps = 88/507 (17%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRI 64 S + ++S L+ +LK +++ L V V GEIS G H YFS+KD + + I Sbjct: 2 SEANKYLTISALTAYLKRKFDADPYLEKVYVTGEISNI-GRRRGRHLYFSIKDPNGHAVI 60 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 A ++ ++++F PEEG++ IG++ + S Y II+E + P G G L A E+ K Sbjct: 61 SAAMF-SYASRLKFDPEEGMKINAIGRVQIYEPSGTYAIILEQMAPDGIGELFLAYEQLK 119 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 +KL EGLF K IP PK IAV+TSPTGAVI DI++ + RFP +V++FP VQG Sbjct: 120 RKLSAEGLFDLPKK-HIPLFPKRIAVVTSPTGAVIEDIVRTVQRRFPSAQVVLFPAVVQG 178 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 D+ I IL+++ + D +I+ RGGGSIEDLW FNDE + R IA + +P+ Sbjct: 179 DKASTTIIKQILRIDA------SNQYDTLIVGRGGGSIEDLWAFNDEKLARTIAATQLPV 232 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS-SLINLEARLNNIIIRLIKY 302 IS++GHETD TL D+ AD RA TPT AAE+A PV L L+ RLN + +LI Sbjct: 233 ISSVGHETDNTLVDFVADKRAATPTAAAELATPVTLTQLVSRLNELQVRLNLRMKQLIDN 292 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + +++ + + D+ S R+D+L L L + + Sbjct: 293 RRQSVDRVAQHVIFQQPDRLYSGYNQRVDQLSHTLNQLLHQRLVSTQHQLTTLA------ 346 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + I + +Q + ++ L + Sbjct: 347 -----------------------------------QRQSQIRQNILQQPREKVQLLAAKL 371 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L RGY I+ + I + + Sbjct: 372 -----------------------------DLMSPLKILTRGYVLIE-KDGQVIRNIKEVH 401 Query: 481 TKTRILINFFDGQANAIVINKAPPKEQ 507 + + +G A A +I K + Sbjct: 402 PDDEVELRLANGSATAKIIETRVLKSE 428 >gi|77405297|ref|ZP_00782393.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae H36B] gi|77176092|gb|EAO78865.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae H36B] Length = 446 Score = 292 bits (748), Expect = 7e-77, Method: Composition-based stats. Identities = 146/493 (29%), Positives = 228/493 (46%), Gaps = 62/493 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD+ S I A +W G Sbjct: 5 LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y II+E P G G L E+ KKKL + G Sbjct: 63 FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK IP + I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N D++I+ RGGGSIEDLW FN+E +V AI S +P+IS++GHET Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV + + S + E R+ +RLI+ K L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LD L ++L ++ + + + +++ L I Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTFSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHT 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ +++ ++ + + Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N+ ++ + + + Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428 Query: 489 FFDGQANAIVINK 501 DG V + Sbjct: 429 MQDGLLEVEVKDV 441 >gi|22536675|ref|NP_687526.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae 2603V/R] gi|76787645|ref|YP_329229.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae A909] gi|76799068|ref|ZP_00781260.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 18RS21] gi|31563130|sp|Q8E166|EX7L_STRA5 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|123758108|sp|Q3K2M4|EX7L_STRA1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|22533515|gb|AAM99398.1|AE014214_12 exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 2603V/R] gi|76562702|gb|ABA45286.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae A909] gi|76585583|gb|EAO62149.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 18RS21] Length = 446 Score = 292 bits (748), Expect = 7e-77, Method: Composition-based stats. Identities = 146/493 (29%), Positives = 229/493 (46%), Gaps = 62/493 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD+ S I A +W G Sbjct: 5 LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y II+E P G G L E+ KKKL + G Sbjct: 63 FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK IP + I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N D++I+ RGGGSIEDLW FN+E +V AI S +P+IS++GHET Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV + + S + E R+ +RLI+ K L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LD L ++L +++ + + + +++ L I Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHI 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ +++ ++ + + Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N+ ++ + + + Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428 Query: 489 FFDGQANAIVINK 501 DG V + Sbjct: 429 MQDGLLEVEVKDV 441 >gi|294140153|ref|YP_003556131.1| exodeoxyribonuclease VII large subunit [Shewanella violacea DSS12] gi|293326622|dbj|BAJ01353.1| exodeoxyribonuclease VII, large subunit [Shewanella violacea DSS12] Length = 319 Score = 292 bits (748), Expect = 8e-77, Method: Composition-based stats. Identities = 112/302 (37%), Positives = 169/302 (55%), Gaps = 8/302 (2%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + + Y+VS L+ ++ ++E L + + EIS + SGH Y +LKDN +++ + Sbjct: 3 TPKNNVYTVSRLNGEVRQLLEGELGKIWLNAEISNF-AAPGSGHWYLTLKDNQAQVRCAM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG + F P G + LV G I+ + YQ+IIES++P+G G L E K KL Sbjct: 62 FKGRNRSVTFKPINGQQVLVKGSISVYEPRGDYQLIIESMLPAGDGLLAQQYEALKMKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K PIP + I VITS TGA ++D+L ++ R P + V+I+P +VQG+ Sbjct: 122 AEGLFAADTKRPIPSNIQKIGVITSATGAALKDVLHVLARRDPSIEVVIYPTQVQGEPAV 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 ++I NAI N +E D+++L RGGGS+EDLW FN E + I NS++PIISA+ Sbjct: 182 QQICNAIAMANARQE------VDVLLLTRGGGSLEDLWCFNSEELAHEIYNSALPIISAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T++DY AD+RAPTP+ AE+ E+ + + + L Sbjct: 236 GHEIDTTISDYVADMRAPTPSAGAELLSKDAENKGGETRVIYRKAQTELAALSAQSQQPH 295 Query: 308 NS 309 Sbjct: 296 EY 297 >gi|268608469|ref|ZP_06142196.1| probable exodeoxyribonuclease VII large subunit [Ruminococcus flavefaciens FD-1] Length = 404 Score = 292 bits (748), Expect = 8e-77, Method: Composition-based stats. Identities = 121/361 (33%), Positives = 191/361 (52%), Gaps = 12/361 (3%) Query: 13 PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P +V++++ ++ I+ + NL V V+GEIS + SGH YF+LKD+ S + +++ Sbjct: 2 PVITVTQINKYIGSILKGDRNLQGVMVKGEISNFTLHWKSGHMYFTLKDSESAVKCVMFA 61 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ F PE+G+ + G I F YQ+ + ++P G+G ALE+ KKKL +E Sbjct: 62 SAAARLRFAPEDGMSVICRGSINVFERDGAYQLYVNDILPEGAGAAGVALEQLKKKLAKE 121 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189 G+F+ +HK P+P++PK I +TS +GA +RDI+ +S R+PL V VQG+ P Sbjct: 122 GIFAPEHKRPVPYMPKKIGAVTSLSGAAVRDIINVLSRRYPLCEVYAVNALVQGEGAPDS 181 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I IL+ D+II+ RGGGS EDL FN E + A+ N +P+ISA+GH Sbjct: 182 ICQGILRAEAA-------GCDVIIVGRGGGSSEDLSAFNTEKVAYAVYNCKVPVISAVGH 234 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD ++AD AADLRAPTP+ AAE+A P + L+ R + + Sbjct: 235 ETDISIADMAADLRAPTPSAAAELAAPDISTFYEKIDMLQRRAERSAFAALDRAADRFTV 294 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + + + S RL L + + + R + I R++S + + Sbjct: 295 LNAKLAAQSPENRMKLSGERLSALEKRNSAAFQRYMERLSSQLSERIGRLESLSPLKVLS 354 Query: 368 K 368 + Sbjct: 355 R 355 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 54/168 (32%), Gaps = 6/168 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + I + I+ + ++ R F Sbjct: 234 HETDISIADMAADLRAPTPSAAAELAAPDISTFYEKIDMLQRRAERSAFAALDRAADRFT 293 Query: 404 MLR-----EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 +L + +NR+ + L R ++ + +S L+S + L Sbjct: 294 VLNAKLAAQSPENRMKLSGERLSALEKRNSAAFQRYMERLSSQLSERIGRLESLSPLKVL 353 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 RGY+ + + ++ ++ + I F G A+A + K+ Sbjct: 354 SRGYSLVYSGD-RLLSSTDGISVGDTVDIRFGKGTASAEIKEVHEEKQ 400 >gi|160880646|ref|YP_001559614.1| exodeoxyribonuclease VII, large subunit [Clostridium phytofermentans ISDg] gi|189037848|sp|A9KMC1|EX7L_CLOPH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|160429312|gb|ABX42875.1| exodeoxyribonuclease VII, large subunit [Clostridium phytofermentans ISDg] Length = 401 Score = 292 bits (748), Expect = 9e-77, Method: Composition-based stats. Identities = 126/361 (34%), Positives = 199/361 (55%), Gaps = 13/361 (3%) Query: 12 HPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSV++++ ++K++ + L+ + ++GE+S + H+SGH YF+LKD ++ +++ Sbjct: 2 EQVYSVTQVNNYIKNMFVKDYVLNRIYMKGEVSNCK-YHTSGHIYFTLKDETGQMACVLF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F EEG +V+G I+ + KYQ+ + + G G L E K+KL E Sbjct: 61 AGYRTGLPFRLEEGQSVIVLGSISVYERDGKYQLYAKEIKLDGLGLLYERFELLKRKLNE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF HK + P+ + ++T+ TGA I+DI+ R P ++++++P KVQG+ K Sbjct: 121 EGLFDPSHKKTLVPYPRTVGIVTASTGAAIQDIINISKRRNPYVQLVLYPAKVQGEGAAK 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I L D II+ RGGGSIEDLW FN+EM+ RAI + SIPIISA+G Sbjct: 181 TIVAGIKALEA-------KGVDTIIVGRGGGSIEDLWAFNEEMVARAIFDCSIPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T++D+ +DLRAPTP+ AAE+AVP E L S+L++ L ++R I + L Sbjct: 234 HETDITISDFVSDLRAPTPSAAAELAVPEIESLLSNLVDYHYSLVQCVMRKITMARSELE 293 Query: 309 SLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + L R L +L + +I K + I R+K+ + + Sbjct: 294 KKQLQLTHLSPVYALRQKRQYTIDLENKLRQRMNELIRYKRHLLDIQIERLKAASPLDKL 353 Query: 367 Q 367 + Sbjct: 354 K 354 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 48/135 (35%), Gaps = 2/135 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 ++++ + Q V + + E ++K L L + + L ++ + Sbjct: 269 NLVDYHYSLVQCVMRKITMARSELEKKQLQLTHL--SPVYALRQKRQYTIDLENKLRQRM 326 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + I+ + I L++ + + LK G++ + D++ + + I D Sbjct: 327 NELIRYKRHLLDIQIERLKAASPLDKLKSGFSYVSDSSGKVVNSITKTKPGDELTIAVTD 386 Query: 492 GQANAIVINKAPPKE 506 G A I + Sbjct: 387 GMIKAKTIGVESIER 401 >gi|77412381|ref|ZP_00788691.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae CJB111] gi|77161569|gb|EAO72570.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae CJB111] Length = 446 Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats. Identities = 146/493 (29%), Positives = 229/493 (46%), Gaps = 62/493 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD+ S I A +W G Sbjct: 5 LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y II+E P G G L E+ KKKL + G Sbjct: 63 FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK IP + I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITIVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N D++I+ RGGGSIEDLW FN+E +V AI S +P+IS++GHET Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV + + S + E R+ +RLI+ K L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LD L ++L +++ + + + +++ L I Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHI 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ +++ ++ + + Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N+ ++ + + + Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428 Query: 489 FFDGQANAIVINK 501 DG V + Sbjct: 429 MQDGLLEVEVKDV 441 >gi|301800134|emb|CBW32738.1| putative exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae OXC141] Length = 446 Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 228/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SRIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|302874809|ref|YP_003843442.1| exodeoxyribonuclease VII, large subunit [Clostridium cellulovorans 743B] gi|307690574|ref|ZP_07633020.1| exodeoxyribonuclease VII large subunit [Clostridium cellulovorans 743B] gi|302577666|gb|ADL51678.1| exodeoxyribonuclease VII, large subunit [Clostridium cellulovorans 743B] Length = 403 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 137/371 (36%), Positives = 204/371 (54%), Gaps = 12/371 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VSEL+ ++K +V+++ L + ++GEIS + IHSSGH YFSLKD S+I A+ Sbjct: 1 MFSKVLTVSELNSYIKRVVDNDYILKNSRIKGEISNLK-IHSSGHIYFSLKDEDSKISAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ I F P+ G+ V G+++ + YQI IE + G G L A E+ K KL Sbjct: 60 MFRSYGENISFQPQNGMNVEVKGRVSVYIKDGAYQIYIEEMKIDGLGDLNKAYEELKAKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 L EGLF D +K P+P P IAV+TSPTGA IRDI+ IS R P + + IFP VQG Sbjct: 120 LREGLFDDTYKKPLPINPISIAVVTSPTGAAIRDIINVISRRNPYVDIKIFPTLVQGIHA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I +AI N ++IILARGGGSIE+LW FN+E++ AI NS PII+ Sbjct: 180 AANIESAIKAAN------NESSTELIILARGGGSIEELWAFNEEVVAYAIHNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHETD+T+AD+A+D RA TP+ AAE+AV + L + +L + I R + + + Sbjct: 234 IGHETDFTIADFASDKRASTPSAAAEIAVTSFVEIDDKLNYYKHKLYSAIKRNFEMEKSR 293 Query: 307 LNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 N L L ++ +D L +E + + ++ + + ++ + Sbjct: 294 TNILASKLKQYNPVAYIANQYTFIDGYKVRLNKAIENNLKFQKNRLVYLNSMLNANNPLG 353 Query: 365 NIQKNRQHILE 375 I K + Sbjct: 354 IISKGYSILRN 364 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 38/98 (38%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + I + + I +T I R+ + + +K + +L + Sbjct: 293 RTNILASKLKQYNPVAYIANQYTFIDGYKVRLNKAIENNLKFQKNRLVYLNSMLNANNPL 352 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + +GY+ +++ + I+ K LA + ++ + DG Sbjct: 353 GIISKGYSILRNEDGKVISTKVALAEEKKVEVILQDGS 390 >gi|238924570|ref|YP_002938086.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale ATCC 33656] gi|238876245|gb|ACR75952.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale ATCC 33656] Length = 406 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 116/365 (31%), Positives = 197/365 (53%), Gaps = 14/365 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + YSV++++ ++K++ + V ++GE+S + H+SGH YF++KD + ++AI Sbjct: 2 ANRNIYSVAQVNSYIKNMFAQDFMLRQVSIKGEVSNCK-YHTSGHIYFTIKDAGAAMNAI 60 Query: 68 IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ G + F +EG + +V G + + + YQ+ + + G G L E+ K + Sbjct: 61 MFAGSRAAGLSFHMKEGDQVIVTGSVEVYEKTGAYQLYAKKIELDGEGNLYLKFEQLKHE 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L E G+F+ ++K PIP I V+T+PTGA ++DI S R P ++VI++P VQG+ Sbjct: 121 LEEMGMFAAEYKQPIPQYAGRIGVVTAPTGAAVQDIRNVSSRRNPYVQVILYPALVQGEG 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I I L+ + D+II+ RGGGSIEDLW FN+E++ RAI + PIIS Sbjct: 181 AANSIVKGIQTLDAM-------NLDVIIVGRGGGSIEDLWAFNEEIVARAIFDCRTPIIS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETDWT+AD+ +D RAPTP+ AAE+AV L NL R++ + I + Sbjct: 234 AVGHETDWTIADFVSDRRAPTPSAAAELAVSDYRQTLERLDNLCRRMDRNLTGRIDFFRE 293 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ + L + L+ ++ RL + LE ++ + + + + + Sbjct: 294 KLSHIKTRLNFLSPQNKLNENKRRLADIEDALERIMKQRLSDCRQRLALLSGTLDAYSPA 353 Query: 364 HNIQK 368 + + Sbjct: 354 KKLAQ 358 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 18/170 (10%), Positives = 60/170 (35%), Gaps = 5/170 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY---IFLEKKEKIA 400 ++ ++ + + + ++ + ++ R +EK++ Sbjct: 237 HETDWTIADFVSDRRAPTPSAAAELAVSDYRQTLERLDNLCRRMDRNLTGRIDFFREKLS 296 Query: 401 ILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + +N++ + + +E I+ ++ C +++ + L +++ L Sbjct: 297 HIKTRLNFLSPQNKLNENKRRLADIEDALERIMKQRLSDCRQRLALLSGTLDAYSPAKKL 356 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 +GY ++ + ++ I I DG A A+V +++ Sbjct: 357 AQGYAYVEVEKKGALHSVSDINAGDDINIYLIDGHARAVVSEVINDEQRK 406 >gi|83814944|ref|YP_444876.1| exodeoxyribonuclease VII, large subunit [Salinibacter ruber DSM 13855] gi|123753439|sp|Q2S4K5|EX7L_SALRD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|83756338|gb|ABC44451.1| exodeoxyribonuclease VII, large subunit [Salinibacter ruber DSM 13855] Length = 398 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 124/364 (34%), Positives = 194/364 (53%), Gaps = 5/364 (1%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SV+EL+ L +VE V V GE+S + +SGH YFSLKD ++I ++WK Sbjct: 2 LSVAELTRGLSDLVEDRYDDVWVEGELSDFT-RAASGHCYFSLKDEDAQIRCVMWKHLTQ 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + F PEEG++ V G + + QI +++ +G G A E+ K+ L EGLF+ Sbjct: 61 YVYFEPEEGMQVRVNGHASVYERRGDLQIQAQAMRQAGKGAQQKAFEELKQTLQAEGLFA 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 + K +P P I V+TS GA I DI ++ RF P V++ PVKVQG + P+ +A+A Sbjct: 121 PERKQALPAFPDTIGVVTSGQGAAIHDIQSGLARRFPPAEVVLCPVKVQGLDAPRAVADA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + N L RPD++I+ RGGGS EDLW FN+E++ RA+ S++P++SA+GHE+D Sbjct: 181 VAAFNDLPADDAQ-RPDLLIVGRGGGSTEDLWAFNEEVVARALDASNLPVVSAVGHESDV 239 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SLL 311 T+AD AD RA TP+ AAE VP + + + L RL + + ++ ++ Sbjct: 240 TIADLVADERAATPSAAAERVVPDRRDVADRVRALHDRLRSRVTGRLQDARQRVDALVAS 299 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 +A + L R LD L L + R H+ +R+ + +++ Sbjct: 300 RAFHAPARRLEQHRQHLDALVDRLGRGGARAVDRARTRLAHLRDRLHALDPEQPLRRGYV 359 Query: 372 HILE 375 H+ + Sbjct: 360 HLTQ 363 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 56/142 (39%), Gaps = 3/142 (2%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYL 416 + +R+ + ++ + + ++ + + ++++ L R R+ Sbjct: 253 PSAAAERVVPDRRDVADRVRALHDRLRSRVTGRLQDARQRVDALVASRAFHAPARRLEQH 312 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 H+ L+ R+ + + T ++ L + + L+RGY + + + Sbjct: 313 RQHLDALVDRLGRGGARAVDRARTRLAHLRDRLHALDPEQPLRRGYVHLT-QDGTSVQSA 371 Query: 477 RNLATKTRILINFFDGQANAIV 498 +L R+ ++F DG+ +A V Sbjct: 372 ESLQDGDRVRLHFQDGRRDAEV 393 >gi|51892984|ref|YP_075675.1| exodeoxyribonuclease VII large subunit [Symbiobacterium thermophilum IAM 14863] gi|51856673|dbj|BAD40831.1| exodeoxyribonuclease VII large subunit [Symbiobacterium thermophilum IAM 14863] Length = 415 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 125/359 (34%), Positives = 207/359 (57%), Gaps = 12/359 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V EL+ ++K +++ + L V V+GEIS ++ H SGH YF+LKD +++ ++++ Sbjct: 14 LTVRELTRYVKDLLDEDPLLRSVWVQGEISNFKWHH-SGHIYFTLKDEVAQVKVVMFRSY 72 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 N++ F PE G++ +V G +T F YQ+ ++ P G G L E+ K++L EGL Sbjct: 73 ANRLRFRPENGMQVIVQGNVTVFERDGVYQLYAAAMEPYGLGALHLEFEQLKRRLAAEGL 132 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F + K PIP +P+ + ++T+PTGA IRD++ RFP +R+++ P VQG + P+ + Sbjct: 133 FDEALKRPIPSLPRAVGLVTAPTGAAIRDMITVARRRFPGMRLVLAPALVQGPDAPESLI 192 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ + P D++I+ RGGGS+EDLW FNDE + RAI +P++SA+GHET Sbjct: 193 RALGLVAR------VPEVDVVIIGRGGGSLEDLWAFNDERLARAIRACPVPVVSAVGHET 246 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNS 309 D+T+AD+AADLRAPTP+ AAE+ VP + L + L RL+ R ++ + + Sbjct: 247 DYTIADFAADLRAPTPSAAAELVVPSRSELLGVVDGLRIRLSTAARRSVERRRIRLRALT 306 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + R RLD L R LE+ ++ + R + R+++ + + + Sbjct: 307 ERPVLQRPQGRVLQDRQRLDGLVRRLEYLGGSLLAARRRELGGLAGRLEALSPLAVLAR 365 Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats. Identities = 15/132 (11%), Positives = 39/132 (29%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 I + + + ++ + R+ + L+ R+E++ + + Sbjct: 284 RIRLSTAARRSVERRRIRLRALTERPVLQRPQGRVLQDRQRLDGLVRRLEYLGGSLLAAR 343 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 + L++ + L RGY + + L R+ + G V Sbjct: 344 RRELGGLAGRLEALSPLAVLARGYAIARTEEGRVVKDAAQLQVGDRLDVLLHRGSVRCQV 403 Query: 499 INKAPPKEQPTK 510 + T+ Sbjct: 404 EEIRGDAGEGTR 415 >gi|332074821|gb|EGI85293.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae GA41301] Length = 446 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 232/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAIIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE + P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKVEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMVTAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S++ RLD+L L+ +L I + + +++ + Sbjct: 294 KKCSQSVIFRQSERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVHARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|325697089|gb|EGD38976.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK160] Length = 446 Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IPIIS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A V + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|296532674|ref|ZP_06895369.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC 49957] gi|296266996|gb|EFH12926.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC 49957] Length = 294 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 123/283 (43%), Positives = 182/283 (64%), Gaps = 4/283 (1%) Query: 1 MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ ++ + PE++VSE+S +K +E V VRGEI+ + SGH Y +LKD Sbjct: 1 MDLDAEAPPRSNTPEFTVSEISGAIKRTLEGEFGRVRVRGEITELKAYP-SGHIYLALKD 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 ++I IIW+ + ++ PE G+E + GK++++ S YQ+II+ + +G G LL Sbjct: 60 EGAKIRGIIWRFAVPRLSLRPENGMEVIATGKVSSYGERSDYQLIIDRIEFAGEGALLAR 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPV 179 +E+ +KKL EGLF + K P+P +P+++ V+TS GAVI+DI I+ RFP ++++PV Sbjct: 120 IEQLRKKLGAEGLFDEARKKPLPLLPRLVGVVTSEKGAVIQDIRTTIARRFPRPILLWPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG ++IA AI + L G P D++I+ARGGGS+EDL FNDE ++RA A Sbjct: 180 PVQGQGAAQQIAAAIDGFSRLPPGIERP--DVLIVARGGGSLEDLMAFNDEAVLRAAAAC 237 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVP + L Sbjct: 238 PIPLISAVGHETDTTLIDFVSDRRAPTPTAAAELAVPARAELL 280 >gi|225377102|ref|ZP_03754323.1| hypothetical protein ROSEINA2194_02747 [Roseburia inulinivorans DSM 16841] gi|225211007|gb|EEG93361.1| hypothetical protein ROSEINA2194_02747 [Roseburia inulinivorans DSM 16841] Length = 401 Score = 292 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 116/360 (32%), Positives = 193/360 (53%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV +++ ++K++ + + V+GE+S + HSSGH YF+LKD I+AI++ G Sbjct: 5 VYSVGQVNTYIKNMFAQDFMMQRISVKGEVSNCK-YHSSGHIYFTLKDPAGTINAIMFAG 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F +EG + +V G + + KYQ+ + G+G L E KK+L E G Sbjct: 64 NRRGLSFQMKEGDKVIVTGSVEVYERDGKYQLYAREIELDGAGNLYLKFEALKKELEEMG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ ++K IP + + ++T+PTGA ++DI + R P +++I++P VQG+ I Sbjct: 124 MFAPEYKKRIPTYIRRLGIVTAPTGAAVQDIRNISARRNPYVQLILYPALVQGEGAVSSI 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I L+ L D+II+ RGGGSIEDLW FN+E + RAI P+ISA+GH+ Sbjct: 184 VNGIRALDAL-------GVDVIIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAVGHQ 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+AV + + + AR+N + + + +N Sbjct: 237 TDTTIADFVADLRAPTPSAAAELAVFDHQAAVAEISAKTARMNRALQQKLDIAKLKVNQY 296 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + L R L +L +E ++ K + +++ + + + Sbjct: 297 QTKLQYVSPESRLHEHRRYAVDLEEKLYRQMEQVLTEKKHRLAILTGQMEGVSPLKKLSQ 356 Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 2/130 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 I K + + ++Q L L+ + L + ++R+ + L ++ + Sbjct: 270 EISAKTARMNRALQQKLDIAKLKVNQYQTKLQYV--SPESRLHEHRRYAVDLEEKLYRQM 327 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + ++I T ++ + L +G++ + D +T + + ++ Sbjct: 328 EQVLTEKKHRLAILTGQMEGVSPLKKLSQGFSYVADETGKAVTDASTVKVGDPLTVHLLK 387 Query: 492 GQANAIVINK 501 G A V Sbjct: 388 GTLKANVTEV 397 >gi|319947472|ref|ZP_08021704.1| exodeoxyribonuclease VII large subunit [Streptococcus australis ATCC 700641] gi|319746412|gb|EFV98673.1| exodeoxyribonuclease VII large subunit [Streptococcus australis ATCC 700641] Length = 446 Score = 292 bits (746), Expect = 2e-76, Method: Composition-based stats. Identities = 149/497 (29%), Positives = 232/497 (46%), Gaps = 62/497 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LSVSSLTKYLKLKFDKDPYLERVYLTGQVSNFRKRPN--HQYFSLKDEKAVIQATVWAGI 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 F EEG++ VIG+I + S Y I+IE P G G L E+ KKKL EEGL Sbjct: 63 YKSFGFELEEGMKINVIGRIQLYEPSGSYSIVIEKAEPDGVGALAIQFEQLKKKLQEEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++ K IP I VITS +GAVIRDI+ ++ RFP + +++FP KVQG+ +EI Sbjct: 123 FQEKFKQAIPQFSNKIGVITSQSGAVIRDIITTVTRRFPGVEILLFPTKVQGEGAAQEIV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N + D++I+ RGGGSIEDLW FN+E +VRAI S +PIIS++GHET Sbjct: 183 ANIQKANARTD------LDVLIIGRGGGSIEDLWAFNEEPVVRAIFESRVPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA-RLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A PV + + + + R+ + + Y L L Sbjct: 237 DTTLADFVADRRAATPTAAAELATPVTKLDLLNHLQKQEGRMATAMRNRLVYNRERLQKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ ++D++ L+ + + R R + +R+ S H +++ Sbjct: 297 SQSVIFRQPERLYDSYLQKIDQIQLRLKQAVSESVTRNSRQLQELRHRLASQAPQHQLER 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R IL+ ++ + +K+ + + K Sbjct: 357 YRDQILQMERLMTLKIKELYQTKAADAKR------------------------------- 385 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + L + RGY +Q ++ + + K + + Sbjct: 386 ----------------LSEALLMLDTSRIVARGYALVQ-AGDHVLDSVDTIKEKDALTLV 428 Query: 489 FFDGQANAIVINKAPPK 505 DGQ V + + Sbjct: 429 MRDGQVEVEVKHVERKE 445 >gi|325107441|ref|YP_004268509.1| exodeoxyribonuclease VII large subunit [Planctomyces brasiliensis DSM 5305] gi|324967709|gb|ADY58487.1| Exodeoxyribonuclease VII large subunit [Planctomyces brasiliensis DSM 5305] Length = 414 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 125/387 (32%), Positives = 211/387 (54%), Gaps = 10/387 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VSEL+ +K ++E+N V +GEIS SGH YF+LKD ++I A++WK ++ Sbjct: 11 TVSELTRQIKDLLEANFDQVVCQGEISNLV-KARSGHVYFTLKDERAQISAVMWKTRASR 69 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++F ++G+E +V G + +P YQ+I+E +P G G L A + ++KL EGLF+ Sbjct: 70 LKFDLQDGLEVVVTGPVEVYPPRGSYQLIVEQAMPQGLGPLELAFRQLQEKLAAEGLFAP 129 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194 + K P+P P +A++TSPTGA +RD+LQ ++ R+PL V++ PV VQG +IA + Sbjct: 130 ERKRPLPRYPNRLALVTSPTGAAVRDMLQVLTRRWPLTDVVVVPVPVQGPTAAPKIAEGL 189 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 Q + P D+I+ RGGGS+EDLW FN+E++ RAIA S IP++SA+GHE D + Sbjct: 190 KQAARI------PGVDVILTGRGGGSLEDLWPFNEEIVARAIAASPIPVVSAVGHEIDVS 243 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLLK 312 +AD AD RA TP+ AAE+ VP + +Q L + + RL N++ + + L + + Sbjct: 244 IADLVADRRALTPSEAAEIIVPDRADIQRWLTDQKFRLENLLRQQSEQARRVLDLLAQRR 303 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + L+ R R D L + ++ + + + ++++ + + + Sbjct: 304 IFQKPQELLTEPRRRCDDLEARMSQRMQRQLETSGQKLQSLTAQLEALSPLRVLARGYTM 363 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + +R + Sbjct: 364 TQDAETGAVISRIDQVRPGQQMRTRLA 390 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 50/142 (35%), Gaps = 3/142 (2%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + +++ +E +++Q + ++ + + L R+ + Sbjct: 274 LTDQKFRLENLLRQQSEQARRVLDLLAQR--RIFQKPQELLTEPRRRCDDLEARMSQRMQ 331 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFD 491 ++++ + T L++ + L RGYT QD I++ + ++ D Sbjct: 332 RQLETSGQKLQSLTAQLEALSPLRVLARGYTMTQDAETGAVISRIDQVRPGQQMRTRLAD 391 Query: 492 GQANAIVINKAPPKEQPTKKCQ 513 G+ + + P+ Q Sbjct: 392 GEVISTIDAATETPSAPSDGKQ 413 >gi|293365586|ref|ZP_06612295.1| exodeoxyribonuclease VII [Streptococcus oralis ATCC 35037] gi|307703538|ref|ZP_07640480.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis ATCC 35037] gi|291315954|gb|EFE56398.1| exodeoxyribonuclease VII [Streptococcus oralis ATCC 35037] gi|307622945|gb|EFO01940.1| exodeoxyribonuclease VII, large subunit [Streptococcus oralis ATCC 35037] Length = 446 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQGD + Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N ++ D++I+ RGGGSIEDLW FN+E++VRAI S +PIIS++G Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TL D+ AD RA TPT AAE+A PV + + + L N E R+ + ++ K L Sbjct: 234 HETDVTLVDFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVQNVLSRKKEAL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + ++ RLD+L L+ +L I + +R+ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHRLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVEMLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|260577256|ref|ZP_05845230.1| Exodeoxyribonuclease VII [Rhodobacter sp. SW2] gi|259020500|gb|EEW23822.1| Exodeoxyribonuclease VII [Rhodobacter sp. SW2] Length = 287 Score = 291 bits (745), Expect = 2e-76, Method: Composition-based stats. Identities = 155/288 (53%), Positives = 200/288 (69%), Gaps = 1/288 (0%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ + PEY+VSELS +K ++E V VRGE+ G +SGH YF LKD+ Sbjct: 1 MDLIDDIPKGNAPEYTVSELSGAVKRVIEGEFGLVRVRGEV-GRVSRPASGHLYFDLKDD 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 S I AI WKG + K++ PEEG+E + G +TTFPG SKYQ+I+ + P+G+G L+ L Sbjct: 60 RSVIAAISWKGQVAKMQVRPEEGMEVVATGTMTTFPGQSKYQLIVSDVAPAGAGALMAML 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 EKR+ L EGLF K PIP++P +I V+TSP+GAVIRDIL R+ RFP V+I+PV Sbjct: 120 EKRRLALAAEGLFDAAGKQPIPYLPGVIGVVTSPSGAVIRDILHRLRDRFPRHVLIWPVA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG C E+A AI N + G PRPD+II+ARGGGS+EDLW FN+E++VRA A S Sbjct: 180 VQGQACAAEVAAAIRGFNAIVPGGAVPRPDLIIVARGGGSLEDLWGFNEEVVVRAAAASV 239 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 IP+ISA+GHETD TL D+AAD+RAPTPT AAEMAVPV+ L ++L L Sbjct: 240 IPLISAVGHETDTTLIDFAADVRAPTPTAAAEMAVPVRLELLAALDGL 287 >gi|291525243|emb|CBK90830.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale DSM 17629] gi|291529298|emb|CBK94884.1| exodeoxyribonuclease VII, large subunit [Eubacterium rectale M104/1] Length = 406 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 116/365 (31%), Positives = 198/365 (54%), Gaps = 14/365 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + YSV++++ ++K++ + V ++GE+S + H+SGH YF++KD + ++AI Sbjct: 2 ANRNIYSVAQVNSYIKNMFAQDFMLRQVSIKGEVSNCK-YHTSGHIYFTIKDAGAAMNAI 60 Query: 68 IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ G + F +EG + +V G + + + YQ+ + + G G L E+ K++ Sbjct: 61 MFAGSRAAGLSFHMKEGDQVIVTGSVEVYEKTGAYQLYAKKIELDGEGNLYLKFEQLKRE 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L E G+F+ ++K PIP I V+T+PTGA ++DI S R P ++VI++P VQG+ Sbjct: 121 LEEMGMFAAEYKQPIPQYAGRIGVVTAPTGAAVQDIRNVSSRRNPYVQVILYPALVQGEG 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I I L+ + D+II+ RGGGSIEDLW FN+E++ RAI + PIIS Sbjct: 181 AADSIVKGIQTLDAM-------NLDVIIVGRGGGSIEDLWAFNEEIVARAIFDCRTPIIS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETDWT+AD+ +D RAPTP+ AAE+AV L NL R++ + I + Sbjct: 234 AVGHETDWTIADFVSDRRAPTPSAAAELAVSDYRQTLERLDNLRRRMDRNLTGRIDFFRE 293 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ + L + L+ ++ RL + LE ++ + + + + + Sbjct: 294 KLSHIKTRLNFLSPQNKLNENKRRLADIEDALERIMKQRLSDCRQRLALLSGTLDAYSPA 353 Query: 364 HNIQK 368 + + Sbjct: 354 KKLAQ 358 Score = 96.4 bits (238), Expect = 9e-18, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 57/142 (40%), Gaps = 2/142 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + + ++ +++ + + + + L+ L +N++ + + Sbjct: 267 RQTLERLDNLRRRMDRNLTGRIDFFREKLSHIKTRLNFL--SPQNKLNENKRRLADIEDA 324 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 +E I+ ++ C +++ + L +++ L +GY ++ + ++ I Sbjct: 325 LERIMKQRLSDCRQRLALLSGTLDAYSPAKKLAQGYAYVEVEKKGALHSVSDINAGDDIN 384 Query: 487 INFFDGQANAIVINKAPPKEQP 508 I DG A A+V +++ Sbjct: 385 IYLIDGHARAVVSEVINDEQRK 406 >gi|253681884|ref|ZP_04862681.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum D str. 1873] gi|253561596|gb|EES91048.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum D str. 1873] Length = 401 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 211/376 (56%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SVSEL+ ++K I++++ + ++GEIS ++ H+SGH YFSLKD S+I+ + Sbjct: 1 MHIKTLSVSELNIYIKRIIDNDFILKNTKIKGEISNFKF-HNSGHVYFSLKDKQSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + F+P+ G ++ G+++ + YQ E + G G L A EK KKKL Sbjct: 60 MFRSYTENLNFIPQNGDNVIIKGRVSVYQKDGLYQFYCEEIEKEGIGDLFIAFEKLKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF ++HK IP K I VITS TGA I+DI+ R + ++I+P VQG+ Sbjct: 120 YEEGLFDEEHKKRIPLYSKKIGVITSATGAAIKDIINVSKRRNKGIEILIYPSLVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + I L++ D+II+ARGGGSIE+LW FN+E + I S PIIS Sbjct: 180 SENLMQGIKYLDSR------DDVDLIIIARGGGSIEELWAFNNEALAYEIYKCSTPIISG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D+RAPTP+ AAE+AV E + ++ N + +L N+I +I K+ Sbjct: 234 VGHETDFTICDFVSDMRAPTPSAAAELAVCSLEEINGNIENYKEKLYNLIKHIINLKLKQ 293 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LNS L N T+ ++D + +L H ++ I + + + + + ++ Sbjct: 294 LNSCENAIKLNNPLNTIVNEYIKIDNIKNKLYHEIQSKIEYDKIKLSKVNSLLNAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 + K I ++ +I Sbjct: 354 ILSKGFSIIQDEMNNI 369 Score = 86.7 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 2/136 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ +I ++ + ++K + K+ + N I + I + Sbjct: 265 LEEINGNIENYKEKLYNLIKHIINLKL--KQLNSCENAIKLNNPLNTIVNEYIKIDNIKN 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ + KI+ +S +L + N L +G++ IQD NN I+ K N+ I Sbjct: 323 KLYHEIQSKIEYDKIKLSKVNSLLNAHNPLNILSKGFSIIQDEMNNIISNKDNIKKDDSI 382 Query: 486 LINFFDGQANAIVINK 501 I F DG+ + Sbjct: 383 KITFKDGETKVKIKEV 398 >gi|331084733|ref|ZP_08333821.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410827|gb|EGG90249.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 9_1_43BFAA] Length = 410 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 116/360 (32%), Positives = 194/360 (53%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV +++ ++K++ + + V+GE+S + H+SGH YFSLKD I +++ G Sbjct: 4 VYSVGQVNSYIKNMFTQDFMLGRIYVKGEVSNCK-YHTSGHIYFSLKDETGTIACVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F EG + +V+G + + +YQ+ + +I G+G L EK K++L E G Sbjct: 63 QRGGLAFRMREGQQVIVLGSVNVYERDGRYQLYAKEIILDGAGLLYEKFEKLKQELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F ++K PIP + ++T+PTGA IRDI+ S R P +++ + P VQG++ + I Sbjct: 123 MFEQEYKRPIPPFASTVGIVTAPTGAAIRDIIHIASRRNPYVQLYLCPALVQGEDAAESI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ I +L+ D+II+ RGGGSIEDLW FN+E++ RAI P+ISA+GHE Sbjct: 183 ADGIRRLDAF-------GVDVIIVGRGGGSIEDLWAFNEEIVARAIFACQTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV + ++ L E +L + +++ N + Sbjct: 236 TDTTIADYVADLRAPTPSAAAELAVYEYDVVRVYLDETERKLKRALSHVVEEMRNQVMQR 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + L+ R + L ++ + + R+ + + + Sbjct: 296 AQRLSYLHPQVKLNEKRQQAVDLEERFRQKMQERLKEAKHGLSVRAERLNGLSPVRKLGQ 355 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 2/146 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R ++ E ++ +++ + + + + ++ L L + ++ L R Sbjct: 267 RVYLDETERKLKRALSHVVEEMRNQVMQRAQRLSYL--HPQVKLNEKRQQAVDLEERFRQ 324 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + ++K +S+ L + L +G++ +Q+ I + ++ + I Sbjct: 325 KMQERLKEAKHGLSVRAERLNGLSPVRKLGQGFSYVQNEIGVNIRKIEDVCPGELLSIKV 384 Query: 490 FDGQANAIVINKAPPKEQPTKKCQLH 515 DG +A V E K Q Sbjct: 385 TDGTIHAQVTEVEKEAEDGGKHSQRE 410 >gi|315613299|ref|ZP_07888208.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis ATCC 49296] gi|322375373|ref|ZP_08049886.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C300] gi|315314534|gb|EFU62577.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis ATCC 49296] gi|321279636|gb|EFX56676.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. C300] Length = 446 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 153/500 (30%), Positives = 236/500 (47%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQGD + Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N ++ D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + + + L N E R+ + ++ K L Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLTHLQNQEKRMATAVQNVLSRKKEAL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVEMLNKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|168186198|ref|ZP_02620833.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum C str. Eklund] gi|169295779|gb|EDS77912.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum C str. Eklund] Length = 400 Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats. Identities = 129/375 (34%), Positives = 213/375 (56%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SVSEL+ ++K++++++ + ++GEIS ++ IH SGH YFSLKD +S+I+ I Sbjct: 1 MQMKTLSVSELNNYIKNVIDNDFILKNSKIKGEISNFK-IHVSGHIYFSLKDKNSKINCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++F+PE+G ++ G+++ + YQ E + G G L A E KKKL Sbjct: 60 MFRSYARNLKFIPEDGDNVILKGRVSVYQKDGAYQFYCEDIEKEGVGDLFIAFEALKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EGLF + +K IP K I VITSPTGA ++DI+ R + ++I+P VQG+ Sbjct: 120 YNEGLFDEYNKKEIPRFAKKIGVITSPTGAAVKDIINVSKRRNKGVELLIYPALVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 PK++ N I + D II+ARGGGSIE+LW FN+E + AI N + P+IS Sbjct: 180 PKDLINGINYFSNR------DDIDTIIIARGGGSIEELWAFNNEDLAYAIYNCNKPVISG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+ V + +++ N + RL N+I I K Sbjct: 234 VGHETDFTICDFVSDRRAPTPSAAAEIGVFNLNEVNANIENYKNRLYNLIRNTINLKFKE 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LNSL + + T++ ++D L +L H +E I + + + + + ++ Sbjct: 294 LNSLESTIKINSPMNTVANEYIKIDNLKNKLCHKIESKIEYEKIKLSKANSLLNAHNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + K I +++ + Sbjct: 354 ILSKGFSIIKDEKNN 368 Score = 87.1 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 2/137 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 N+ + +I + + +++ + F K+ + N + + I L Sbjct: 264 NLNEVNANIENYKNRLYNLIRNTINLKF--KELNSLESTIKINSPMNTVANEYIKIDNLK 321 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + KI+ +S +L + N L +G++ I+D NN IT K + Sbjct: 322 NKLCHKIESKIEYEKIKLSKANSLLNAHNPLNILSKGFSIIKDEKNNVITTKEKIEKDKC 381 Query: 485 ILINFFDGQANAIVINK 501 I I F DG + + Sbjct: 382 INITFKDGSTKVRISDV 398 >gi|310829049|ref|YP_003961406.1| exodeoxyribonuclease VII [Eubacterium limosum KIST612] gi|308740783|gb|ADO38443.1| exodeoxyribonuclease VII [Eubacterium limosum KIST612] Length = 406 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 126/359 (35%), Positives = 201/359 (55%), Gaps = 12/359 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+E+++ +K +++ N L ++ V GEIS + HSSGH YFSLKD+ SRI ++++ Sbjct: 6 LSVTEVNHFIKTMLDGNSVLKNLMVEGEISNLKF-HSSGHVYFSLKDSQSRIACVMFRNH 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + ++F PEEG++ + G I+ F + +YQI + S+ P G G L A E+ K+K G Sbjct: 65 VQNLKFRPEEGMKITIKGGISVFERNGQYQIYVRSMEPQGVGALYKAFEQLKEKYQALGW 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 + K P+P + + ++TSPTGA IRD++ I R P + ++I+ VQGD +EIA Sbjct: 125 LDTEQKKPLPEYIRRVGIVTSPTGAAIRDMISVIRRRNPQIHIVIYGALVQGDGAAEEIA 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N L D+II+ RGGGS+EDLW FN+E++ AI S +P+ISA+GHET Sbjct: 185 RGIETFNRL------GNADVIIIGRGGGSMEDLWAFNEEIVGEAIHASQLPVISAVGHET 238 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+ AD+RAPTP+ A E+ +L L++RL + R I+ L Sbjct: 239 DFTIADFVADMRAPTPSVAGELVAENLLEWAGTLTQLKSRLLKAMNRHIEKNRMALTQAA 298 Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + ++ R LD L + + I R+ + R+ + + +++ Sbjct: 299 ARLLRSGPENQVADMRLYLDALQDRMLRGMRFEIERQRSRVESVSRRLDALNPLGVLKR 357 Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 56/140 (40%), Gaps = 2/140 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 N+ + + + + + + + +H+ + + A L LR +N++ + ++ L Sbjct: 264 NLLEWAGTLTQLKSRLLKAMNRHIEKNRMALTQAAARL--LRSGPENQVADMRLYLDALQ 321 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ + +I+ + V +R L + LKRGY +D + + Sbjct: 322 DRMLRGMRFEIERQRSRVESVSRRLDALNPLGVLKRGYVLAEDKSGGLVRSAAEAEAAGT 381 Query: 485 ILINFFDGQANAIVINKAPP 504 + + F DG+ VI + Sbjct: 382 MKLKFHDGEVIVSVIKEGAE 401 >gi|262282722|ref|ZP_06060490.1| exodeoxyribonuclease VII large subunit [Streptococcus sp. 2_1_36FAA] gi|262262013|gb|EEY80711.1| exodeoxyribonuclease VII large subunit [Streptococcus sp. 2_1_36FAA] Length = 446 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 155/500 (31%), Positives = 236/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y II+E P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIILEKAEPDGIGVLAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQEKFKQTLPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QIADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L + R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQKNRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ ++ ++ + + + + Sbjct: 354 VQRLQEQTVQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N I + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVIESTIGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|152990176|ref|YP_001355898.1| exodeoxyribonuclease VII large subunit [Nitratiruptor sp. SB155-2] gi|166232358|sp|A6Q232|EX7L_NITSB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|151422037|dbj|BAF69541.1| exodeoxyribonuclease VII, large subunit [Nitratiruptor sp. SB155-2] Length = 416 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 122/370 (32%), Positives = 202/370 (54%), Gaps = 12/370 (3%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+VS+L+ +K+++ES+ V V GE+S H+SGH YFSLKD S I ++++ L Sbjct: 3 VYTVSQLNEQIKNLLESHFVEVYVEGEVS-RPTYHTSGHLYFSLKDEKSVIRCVMFRSAL 61 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K+ F E+G + +V GKI + +YQ+ L PSG G+L A E+ K KL ++G F Sbjct: 62 AKVPFRVEDGQKLIVAGKIGVYKPRGEYQLYATELHPSGVGSLQLAFEQLKAKLEKKGYF 121 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + + K P+P + IA++TS TGA ++D+L+ I R+P ++V + VQG + IA Sbjct: 122 ASELKKPLPDFIQTIALVTSQTGAALQDMLRIIQNRWPLVKVYVVDTLVQGSDAAPMIAR 181 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I + L D+I++ RGGGS+EDLW FN+E++ AI + PI+SA+GHE D Sbjct: 182 SIAYADGL-------GVDVIVVGRGGGSLEDLWPFNEEIVADAIFEAKTPIVSAVGHEID 234 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + ++D+ ADLRAPTP+ A EM +P ++ + L L RL + +++ K L L Sbjct: 235 FLISDFVADLRAPTPSAAMEMILPDRQEMLMHLDLLMQRLTKRMQTILQLKTQELGHLQN 294 Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 +L + L + + + + I+ H+ + + ++ + Sbjct: 295 SLFQLSPQKRLEFYEKEITIMNERMNETITAILKNSSHEIPHLKA-LFDQKIEWIWKQKK 353 Query: 371 QHILEKQQHI 380 Q + QQ + Sbjct: 354 QDLTSLQQKL 363 Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 5/41 (12%), Positives = 15/41 (36%) Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 H+ L+ R+ + ++ + L + + L+ Sbjct: 266 HLDLLMQRLTKRMQTILQLKTQELGHLQNSLFQLSPQKRLE 306 >gi|224543280|ref|ZP_03683819.1| hypothetical protein CATMIT_02480 [Catenibacterium mitsuokai DSM 15897] gi|224523813|gb|EEF92918.1| hypothetical protein CATMIT_02480 [Catenibacterium mitsuokai DSM 15897] Length = 440 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 131/495 (26%), Positives = 228/495 (46%), Gaps = 60/495 (12%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65 ++ SV L+ ++K ++++ L V +RGEIS YR SGH YF+LKD+ S I Sbjct: 1 MERQYVSVHALNRYIKAKLDNDMQLQTVYIRGEISNYRPHP-SGHMYFTLKDDQTESSIS 59 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 AI++ ++F ++G++ + +++ F + +YQ+ + S+ G G L + K+ Sbjct: 60 AIMFASQARYLKFRLKDGMKVFITAQVSVFERAGRYQLYVRSMQEDGLGNLYLRFNELKQ 119 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ HK IP +P+ +A++++ GA ++D+L+ + R+P + I+PV VQG Sbjct: 120 ALEREGLFNAIHKKEIPSMPERLAILSAKQGAALQDVLRTLHQRYPLVARDIYPVPVQGR 179 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + + I + + +++ + I+L RGGGSIEDLW+FN+E + R I + PII Sbjct: 180 DAYQVIVDTLKKVDEM-------GYSTILLVRGGGSIEDLWNFNEEALARCIYDLKTPII 232 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 + +GHETD+TL DY +DLRAPTPT AA AVP ++ L + L N RL++++ + I + Sbjct: 233 TGVGHETDYTLVDYVSDLRAPTPTAAAVAAVPSQKDLLNHLENKIVRLSSVMRKTIYLER 292 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + Sbjct: 293 QK-------------------------------------------LEKYQHSYVFTDPSR 309 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + Q + +R + E L L K + I Sbjct: 310 IFETKFMKLDNIQLKLNN---FKIRIKQQSRYEMHKKLIQLNTLIKQKQLIERKSISNNQ 366 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 +E + +K+ TS + L + T++RGY I +++ I + L+ Sbjct: 367 ELLESQFINYLKNKKTSFIYSVEKLDLLSPLKTMQRGY-IISKKDDHIIKSVKELSHNET 425 Query: 485 ILINFFDGQANAIVI 499 + + + DG+ AIV Sbjct: 426 VTLVYVDGEKEAIVK 440 >gi|255658169|ref|ZP_05403578.1| exodeoxyribonuclease VII, large subunit [Mitsuokella multacida DSM 20544] gi|260849477|gb|EEX69484.1| exodeoxyribonuclease VII, large subunit [Mitsuokella multacida DSM 20544] Length = 402 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 133/358 (37%), Positives = 206/358 (57%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K + E L + VRGE+S +R +SGH YF+LKD +S I ++++ Sbjct: 5 SVSEVTNFIKRMFQREPVLGCIQVRGELSNFRCY-ASGHCYFTLKDANSCIKCVMFRSRA 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ +V G I+ + YQ+ + ++P G+G L A E+ K +L EGLF Sbjct: 64 QGLRFRPENGMQVVVSGNISVYERDGVYQLYADRMMPEGAGDLALAFEQLKARLAAEGLF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 HK P+P PK I ++TS +GAV+RDI R+P +++++ PV VQG+E +IA Sbjct: 124 DAAHKKPLPRFPKRIGIVTSISGAVLRDIYHVSKRRWPSVQLVLKPVLVQGEEAAAQIAA 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N D++I+ RGGGS+EDLW FN+E +VRAI S IP+ISA+GHETD Sbjct: 184 AIAFFNEKYP------VDVLIVGRGGGSMEDLWAFNEEPVVRAIYASKIPVISAVGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +TLAD+A+D RA TP+ AAE+AVP + L +L ARL R ++ K L++ + Sbjct: 238 FTLADFASDQRAATPSQAAELAVPDRAELLRYTESLMARLAQQGKRQLQEKRLRLDACRR 297 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L L+ RLD L+ ++ + K + ++ +H +++ Sbjct: 298 SAALQKPQLLLASRTQRLDHATARLDALMKSQMKEKRHALEIALQQLDYLNPVHILRQ 355 Score = 97.9 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 56/141 (39%), Gaps = 3/141 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIA--ILHMLREQTKNRIFYLHTHIKKLITRI 427 R +L + + + Q + EK+ ++ ++ + + + R+ Sbjct: 263 RAELLRYTESLMARLAQQGKRQLQEKRLRLDACRRSAALQKPQLLLASRTQRLDHATARL 322 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + ++ ++K ++ I + L + L++GY ++ + +T R+ R+ I Sbjct: 323 DALMKSQMKEKRHALEIALQQLDYLNPVHILRQGYGIVEKA-GSAVTSVRDARPGDRLTI 381 Query: 488 NFFDGQANAIVINKAPPKEQP 508 DG+ A V + A + + Sbjct: 382 TLKDGRLAARVESAAGTEGRA 402 >gi|306825092|ref|ZP_07458434.1| exodeoxyribonuclease VII large subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432528|gb|EFM35502.1| exodeoxyribonuclease VII large subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 446 Score = 290 bits (743), Expect = 3e-76, Method: Composition-based stats. Identities = 153/500 (30%), Positives = 235/500 (47%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P K I V+TS +GAVIRDI+ +S RFP + ++++P +VQGD + Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTRVQGDGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N ++ D++I+ RGGGSIEDLW FN+E++VRAI S +PIIS++G Sbjct: 180 EIARNIARANQRED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + + + L N E R+ + ++ K L Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVQNVLSRKKEAL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDSNQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAILKKEE-TVVDSVEKLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|238926869|ref|ZP_04658629.1| exodeoxyribonuclease VII [Selenomonas flueggei ATCC 43531] gi|238885401|gb|EEQ49039.1| exodeoxyribonuclease VII [Selenomonas flueggei ATCC 43531] Length = 416 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 129/356 (36%), Positives = 201/356 (56%), Gaps = 12/356 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+++ ++K + E LS + +RGE+S Y+ SGHAYF+LKD + + +++ G Sbjct: 19 SVSDVTRYIKGMFEHEPILSDLLIRGEVSNYKRYP-SGHAYFTLKDAGASMKCVMFNGYA 77 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ + G I+ + YQ+ + SL P G+G L A E+ + +L EGLF Sbjct: 78 RNLRFAPENGMQVIAGGNISVYERDGAYQLYVSSLTPEGAGALALAFEQMRDRLAAEGLF 137 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + HK P+P P+ I ++TS GAV+RDI R+P +++I+ PV VQG ++IA+ Sbjct: 138 DEGHKQPLPRFPRRIGIVTSSAGAVLRDIHNVSKRRWPGVQLILHPVLVQGAGAAEQIAD 197 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ N D++I+ RGGGS EDLW FN+E++VRA+ S IP+ISA+GHETD Sbjct: 198 AVAFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEVVVRAVYRSRIPVISAVGHETD 251 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL D+ +D RA TP+ AAE AVP ++ L+ L ARL+ R I + L++L++ Sbjct: 252 TTLVDFVSDRRAATPSQAAEFAVPDVVEIERFLMGLRARLDAGRKRQIDHAGTRLSTLVQ 311 Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 N L+ R DR EL H + ++ R++ + + Sbjct: 312 RPWCANPRMLLAPLMQRSDRAAAELHHAAKEQSVAARHRLELVLKRLELLNPVRVL 367 Score = 91.0 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 13/130 (10%), Positives = 48/130 (36%), Gaps = 3/130 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + ++ + ++ K+ + + + + + L + + Sbjct: 282 RFLMGLRARLDAGRKRQIDHAGTRLSTLVQR--PWCANPRMLLAPLMQRSDRAAAELHHA 339 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + + + L+ L RG++ ++ + +++ +++ R+ I F Sbjct: 340 AKEQSVAARHRLELVLKRLELLNPVRVLCRGFSIVE-KDGRAVSRVKDVTAGDRVNITFA 398 Query: 491 DGQANAIVIN 500 DG+ +A+V Sbjct: 399 DGKISAVVEQ 408 >gi|294506729|ref|YP_003570787.1| exodeoxyribonuclease VII large subunit [Salinibacter ruber M8] gi|294343057|emb|CBH23835.1| Probable exodeoxyribonuclease VII large subunit [Salinibacter ruber M8] Length = 436 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 3/283 (1%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 N+ D P SV+EL+ L +VE V V GE+S + +SGH YFSLKD ++I Sbjct: 3 PTNNTADDPVLSVAELTRGLSDLVEDRYDDVWVEGELSDFT-RAASGHCYFSLKDEDAQI 61 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 ++WK + F PEEG++ V G + + QI +++ +G G A E+ K Sbjct: 62 RCVMWKHLTKYVYFEPEEGMQVRVNGHASVYERRGDLQIQAQAMRQAGKGAQQKAFEELK 121 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQG 183 + L EGLF+ + K +P P I V+TS GA I DI ++ RF P V++ PVKVQG Sbjct: 122 QTLQAEGLFAPERKQALPAFPDTIGVVTSGQGAAIHDIQSGLARRFPPAEVVLCPVKVQG 181 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + P+ +A+A+ N L RPD++I+ RGGGS EDLW FN+E++ RA+ S++P+ Sbjct: 182 LDAPRAVADAVAAFNDLPADDAQ-RPDLLIVGRGGGSTEDLWAFNEEVVARALDASNLPV 240 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 +SA+GHE+D T+AD AD RA TP+ AAE VP + + ++ Sbjct: 241 VSAVGHESDVTIADLVADERAATPSAAAERVVPDRRDVATACA 283 >gi|262038470|ref|ZP_06011844.1| exodeoxyribonuclease VII, large subunit [Leptotrichia goodfellowii F0264] gi|261747565|gb|EEY35030.1| exodeoxyribonuclease VII, large subunit [Leptotrichia goodfellowii F0264] Length = 446 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 135/496 (27%), Positives = 231/496 (46%), Gaps = 56/496 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ +SVSE++ +K +E ++ ++GE+S + SGH YF+LKD+ + + Sbjct: 1 MEQTVFSVSEVNRAVKQFLEGTSTFKNILIQGELSNIT-YYRSGHLYFTLKDDKASVKCA 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-SGSGTLLTALEKRKKK 126 I+K I +EG + + G T + S +QII E+L G+L LE+ KK Sbjct: 60 IFKYIYKNIPTDLKEGDQVKITGSATIYEASGSFQIIAEALEKTDKLGSLYEKLERLKKL 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 LE+G F + +K P+P +P I V+T+ TGA IRDI+ RF + + ++P KVQG+ Sbjct: 120 YLEKGYFDESNKKPLPLLPVNIGVVTAETGAAIRDIINTAHKRFRNINIYLYPAKVQGEG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E++ I N +K+ D++I+ RGGGSIEDLW FN+E ++ A+ +S IP+IS Sbjct: 180 SAAEVSAGIEFFNKMKKE-EQLDTDVLIVGRGGGSIEDLWSFNEEAVIEAVFHSEIPVIS 238 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D L+D AD RA TPT AAE+ +PVKE L +L + +N +++ + Sbjct: 239 AVGHEIDNLLSDLVADKRAATPTQAAEILIPVKEELIRNLEIRKNNVNKLLLNKVTLMKK 298 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + N L+ + +L + + L+ I+ R F++ + + L Sbjct: 299 ELEQRKNNYYIKNYVGILNDKKLQLMEKEQRITRELKRIVERAREQFDYRKKKFEKTDLK 358 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + ++ + + + LR + + + K Sbjct: 359 MILNDKKDKLNTFEKKLNNKISEILRELKKDLEYKT------------------------ 394 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 L ++ + LK+GYT + N + + L+ Sbjct: 395 -----------------------AKLSKYSINDILKQGYTITR-KNGKVVKRGIELSKSD 430 Query: 484 RILINFFDGQANAIVI 499 I I F D + + V Sbjct: 431 NIEIQFSDMKVKSTVK 446 >gi|77409333|ref|ZP_00786036.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae COH1] gi|77172065|gb|EAO75231.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae COH1] gi|319744562|gb|EFV96915.1| exodeoxyribonuclease VII large subunit [Streptococcus agalactiae ATCC 13813] Length = 446 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 143/493 (29%), Positives = 228/493 (46%), Gaps = 62/493 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD+ S I A +W G Sbjct: 5 LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGQ 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y II+E P G G L E+ KKKL + G Sbjct: 63 FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK +P + I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDDRHKQLLPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I N D++I+ RGGGSIEDLW FN+E +V AI S +P+IS++GHET Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGGSIEDLWAFNEECVVEAIFESRLPVISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A V + + S + E R+ +RLI+ K L Sbjct: 237 DTTLADFVADRRAATPTAAAELATTVTKIDILSWITERENRMYQSSLRLIRTKEERLQKS 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ +LD L ++L +++ + + + +++ L + Sbjct: 297 KQSVIFRQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRLHT 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 ++ +++ ++ + + Sbjct: 357 YQERVVQSRRLLSSTMTSQYDSKL------------------------------------ 380 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S + RGY I+ N+ ++ + + + Sbjct: 381 -----------ARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINEGDHLQVK 428 Query: 489 FFDGQANAIVINK 501 DG V + Sbjct: 429 MQDGLLEVEVKDV 441 >gi|313681594|ref|YP_004059332.1| exodeoxyribonuclease vii large subunit [Sulfuricurvum kujiense DSM 16994] gi|313154454|gb|ADR33132.1| Exodeoxyribonuclease VII large subunit [Sulfuricurvum kujiense DSM 16994] Length = 420 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 125/489 (25%), Positives = 213/489 (43%), Gaps = 81/489 (16%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVS L+ +K ++E++ V V GE+S H SGH YF+LKDN S I +++KG + Sbjct: 5 LSVSSLNEQIKTLLETSFEFVSVEGELS-RVTKHGSGHIYFTLKDNESAIKCVMFKGNAS 63 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +++F EEG ++ G ++ + +YQI S P G+G L A E+ K+KL +G F Sbjct: 64 RLKFSLEEGAHVILHGALSLYKPRGEYQINAFSAEPYGAGALAVAFEQLKQKLEAKGYFD 123 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 K P P P+ + ++TS TGA ++D+ + + R+P +++I+ V VQG +IA+A Sbjct: 124 PTRKKPFPKFPQTVVLVTSATGAALQDMQRVATQRWPLVKLIVLDVLVQGPSASGQIADA 183 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + +TL D +++ RGGGSIEDLW FN+E++ A+ P ISA+GHE DW Sbjct: 184 LRTADTLHA-------DAVVVGRGGGSIEDLWAFNEEIVADALYAMKTPTISAVGHEIDW 236 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++DY AD+RAPTP+ A +M +P + Sbjct: 237 VISDYVADMRAPTPSAAMQMLLPDQ----------------------------------- 261 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + +D + + + RK + K + H ++ ++ I Sbjct: 262 --------NELSQSIDEIRYGAYGMITQRLERKREQLLSMQEAFKRHGVEHRLEVQQELI 313 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E ++ + + + R+ I L+ R+ + Sbjct: 314 KELRERLNRQMT-------------------------QRLEQSRREIIPLMERLSQNIES 348 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 ++ ++ + + KN K G+ I I L+ R D + Sbjct: 349 ILRQKQFMITQLSEGFNANHPKNKNKSGFAQIARE-GKVI-DLDALSVGDRFEA-MNDKR 405 Query: 494 -ANAIVINK 501 A V+ Sbjct: 406 VVRAEVVEI 414 >gi|323693776|ref|ZP_08107971.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum WAL-14673] gi|323502162|gb|EGB18029.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum WAL-14673] Length = 404 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 120/360 (33%), Positives = 191/360 (53%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSVS+++ ++K++ + S + V+GE+S + HSSGH YF+LKD I A+++ G Sbjct: 7 VYSVSQVNAYIKNMFAQDFALSRISVKGEVSNCK-YHSSGHIYFTLKDGLGAIQAVMFAG 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F+ EEG + +V G + + +YQ+ + G+G L EK + +L E G Sbjct: 66 KRRGLNFVLEEGQQVVVKGSVEVYERDGRYQLYAAEITLDGTGDLFKRFEKLRNELEEMG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ ++K+PIP + ++T+ TGA IRDI+ R P +++++ P +VQG+ I Sbjct: 126 MFAPEYKSPIPKYAMKVGIVTASTGAAIRDIINIARRRNPYVQLVLCPAQVQGEGAASSI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A I L+ + D++I+ RGGGSIEDLW FN+E + RAI P+ISA+GHE Sbjct: 186 ARGIETLDAM-------GLDVLIVGRGGGSIEDLWAFNEETVARAIFACKTPVISAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV + L +L + + L Sbjct: 239 TDVTIADYVADLRAPTPSAAAELAVFDYALFEGQLREAGQKLYRALSGRKEMAAYRLEQY 298 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L N ++ L+ R RL +E L+ + + + R+ + I K Sbjct: 299 RLRLRLYNPERQLNEKRQRLADAEERMERLLKQKLTDRKHRLALLSGRLHGLSPLEKISK 358 Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 46/134 (34%), Gaps = 2/134 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E Q + + + R + + L + + ++ + R+E +L Sbjct: 272 QLREAGQKLYRALSG--RKEMAAYRLEQYRLRLRLYNPERQLNEKRQRLADAEERMERLL 329 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 K+ +++ + L + + +G+ + + + ++ +LI D Sbjct: 330 KQKLTDRKHRLALLSGRLHGLSPLEKISKGFGFLTGEDGKRVESAESVKAGDHLLIRVLD 389 Query: 492 GQANAIVINKAPPK 505 G+ A V+ Sbjct: 390 GRIEAEVVKAEKSG 403 >gi|300854299|ref|YP_003779283.1| exodeoxyribonuclease VII large subunit [Clostridium ljungdahlii DSM 13528] gi|300434414|gb|ADK14181.1| exodeoxyribonuclease VII large subunit [Clostridium ljungdahlii DSM 13528] Length = 398 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 124/370 (33%), Positives = 206/370 (55%), Gaps = 12/370 (3%) Query: 15 YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS+++ ++K ++++ ++ ++GE+S + +H+SGH YFSLKD S+I+ I++K Sbjct: 6 LTVSDINNYIKKTLDNDFILANCSIKGEVSNLK-LHTSGHIYFSLKDKFSKINCIMFKSD 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F+PE+G++ +V G+++ + YQ+ + P G G L A EK K KL ++GL Sbjct: 65 AQNLNFIPEDGMKVIVKGRVSLYEKEGLYQLYCNEMKPDGMGELYLAFEKLKVKLEQKGL 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIA 191 F + HK IP K I VITS TGA ++DI+ R + ++I+P VQG ++ Sbjct: 125 FDESHKRKIPTYAKKIGVITSSTGAALKDIINVTKRRNKKVELLIYPSLVQGANASSDVI 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I LN++++ ++II+ARGGGSIE+LW FNDE + AI +S PII+ +GHE Sbjct: 185 KGIEVLNSIED------VELIIIARGGGSIEELWCFNDEKLAEAIYSSKKPIITGVGHEI 238 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ D+ +D RAPTP+ AAE+AV E L + + RL IK + N LN L Sbjct: 239 DYTIVDFVSDRRAPTPSAAAEIAVFNLEEALQKLNSYKNRLYTYAKDKIKDEKNRLNFLK 298 Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 K L + ++ +D+L L L + I K I + + ++ + + Sbjct: 299 KTLDLNSPLIYIANQYSNVDKLKELLNFKLNVKINEKKEKLAKINALLSAHNPLNILNRG 358 Query: 370 RQHILEKQQH 379 I + + + Sbjct: 359 YSIIEDDENN 368 Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 2/129 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 N+++ Q + + + + + + + I ++++ KL Sbjct: 264 NLEEALQKLNSYKNRLY--TYAKDKIKDEKNRLNFLKKTLDLNSPLIYIANQYSNVDKLK 321 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + F L+ KI ++ +L + N L RGY+ I+D NN I+ L K + Sbjct: 322 ELLNFKLNVKINEKKEKLAKINALLSAHNPLNILNRGYSIIEDDENNGISSIEELNKKDK 381 Query: 485 ILINFFDGQ 493 I + DG Sbjct: 382 IKVIMKDGT 390 >gi|187736206|ref|YP_001878318.1| exodeoxyribonuclease VII, large subunit [Akkermansia muciniphila ATCC BAA-835] gi|187426258|gb|ACD05537.1| exodeoxyribonuclease VII, large subunit [Akkermansia muciniphila ATCC BAA-835] Length = 454 Score = 290 bits (742), Expect = 4e-76, Method: Composition-based stats. Identities = 139/493 (28%), Positives = 224/493 (45%), Gaps = 53/493 (10%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 F ++ +V +L Y L+ V + V GE+S + H+SGH YF+LK+ + Sbjct: 2 EFPEETPAAPKPITVKQLVYRLRDTVSIAMGTQWVVGELSNVKH-HTSGHVYFTLKEQGA 60 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 I +K +K +EG++ V+G T +P + Q++I + +G G L T + Sbjct: 61 EIFCAFFKAAASKCPIRLQEGMKVHVLGSATVYPDRGQLQLVIRQVKAAGQGDLQTRFLE 120 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K KL EGLF +HK IP P+ I ++TSPTGAVI+D+ + R P ++ + P++V Sbjct: 121 LKAKLQREGLFDAEHKKKIPTFPRAIGIVTSPTGAVIQDMRHVLERRAPWVKAYLLPIRV 180 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG EIA A+ + P D++I+ RGGGSIEDLW+FN+E + RAI ++ Sbjct: 181 QGAGAEHEIAAAVRAWSGA-PFNGLPPVDVLIVGRGGGSIEDLWNFNEETVARAIYECTV 239 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GH+TD+T+AD+ ADLRAPTPT AAE+A P L +E L+ + Sbjct: 240 PVISAVGHDTDFTIADFVADLRAPTPTAAAELATPDGPEWLRKLSRMEQALHASARHSLL 299 Query: 302 YKINTLNSLLK-ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L+ L+ L ++ LS RLD + L++ IF H N + ++++ Sbjct: 300 RSKLKLDVYLRGKLLDAYSLLSPYSQRLDDMEETLQNAATTRIFHNALHINKLEHQLQMR 359 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 H ++ Q + Q + R+ L + + Sbjct: 360 HPAHRNRERTQLLASLQAGLSHA-------------------------AAARMTDLSSQL 394 Query: 421 KKLITRIE-FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + R+E ++ + V + L I Q + Sbjct: 395 TLIQARLEAHSPEQTLRRGYALVENQDKQL-----------------------IRQTNQV 431 Query: 480 ATKTRILINFFDG 492 ++ I DG Sbjct: 432 HAGEKLKIRVSDG 444 >gi|134045887|ref|YP_001097373.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis C5] gi|132663512|gb|ABO35158.1| Exodeoxyribonuclease VII large subunit [Methanococcus maripaludis C5] Length = 407 Score = 290 bits (741), Expect = 5e-76, Method: Composition-based stats. Identities = 131/377 (34%), Positives = 209/377 (55%), Gaps = 12/377 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S +VSEL+ ++K +E + L ++GEIS +H SGH YF+LKD +S ID Sbjct: 8 SAFSNTLTVSELNNYVKSTLEEDYLLKRASIKGEISNCT-LHKSGHVYFTLKDENSSIDC 66 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++K + F P EG+ ++ GK++ + + KYQ S+ G G L EK K+K Sbjct: 67 VMFKPYAKNLNFSPTEGMGVILKGKVSLYAKTGKYQFYCNSMEKDGIGDLFIKFEKLKEK 126 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 L EGLFS+++K IP PK I +ITSPTGA I+DI++ R + +II P VQG+ Sbjct: 127 LENEGLFSEKYKQKIPKYPKNIGIITSPTGAAIKDIIKVARNRNSSVNLIIHPAVVQGES 186 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K + + +LN L + D+II+ARGGGS+EDLW FNDE + RAI S P+++ Sbjct: 187 AAKTVIAGLSELNKL------EKIDLIIIARGGGSMEDLWCFNDESLARAIFESKKPVVT 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D+T++D+ +DLRA TP+ AAE+ V + L+S + N E L + I I + Sbjct: 241 GIGHEIDFTISDFVSDLRAATPSNAAELTVYNEHELKSIIDNFERILKHRIKIEIANRSY 300 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L + + + + +DR+ + H ++ I + + F + + + + Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKLHIDRIMTLMNHEIKNRISYELKRFEKSYSLLNAYNPL 360 Query: 364 HNIQKNRQHILEKQQHI 380 + + K I ++ + I Sbjct: 361 NVLNKGYSIIQDENEKI 377 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 2/133 (1%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITR 426 N + + E+I+K ++ + ++ IL+ + + K++I HI +++T Sbjct: 272 NEHELKSIIDNFERILKHRIKIEIANRSYELDILYSKIEKNSPKSKIEKQKLHIDRIMTL 331 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++I + +L ++ N L +GY+ IQD N I+ K L T+ + Sbjct: 332 MNHEIKNRISYELKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIISSKNLLKTENDVK 391 Query: 487 INFFDGQANAIVI 499 I DG +A + Sbjct: 392 ITLKDGTVDAHIT 404 >gi|325661674|ref|ZP_08150297.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 4_1_37FAA] gi|325471927|gb|EGC75142.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 4_1_37FAA] Length = 410 Score = 290 bits (741), Expect = 5e-76, Method: Composition-based stats. Identities = 116/360 (32%), Positives = 194/360 (53%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV +++ ++K++ + + V+GE+S + H+SGH YFSLKD I +++ G Sbjct: 4 VYSVGQVNSYIKNMFTQDFMLGRIYVKGEVSNCK-YHTSGHIYFSLKDETGTIACVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F EG + +V+G + + +YQ+ + +I G+G L EK K++L E G Sbjct: 63 QRGGLAFRMREGQQVIVLGSVNVYERDGRYQLYAKEVILDGAGLLYEKFEKLKQELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F ++K PIP + ++T+PTGA IRDI+ S R P +++ + P VQG++ + I Sbjct: 123 MFEQEYKRPIPPFASTVGIVTAPTGAAIRDIIHIASRRNPYVQLYLCPALVQGEDAAESI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ I +++ D+II+ RGGGSIEDLW FN+E++ RAI P+ISA+GHE Sbjct: 183 ADGIRRMDAF-------GVDVIIVGRGGGSIEDLWAFNEEIVARAIFACQTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV + ++ L E +L + ++ K N + Sbjct: 236 TDTTIADYVADLRAPTPSAAAELAVYEYDVVRVYLDETERKLKRALSHAVEEKRNQVMQR 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + L+ R + L ++ + + R+ + + + Sbjct: 296 AQRLSYLHPLVKLNEKRQQAVDLEERFRQRMQERLKEAKHGLSVRAERLNGLSPVRKLGQ 355 Score = 97.5 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 50/146 (34%), Gaps = 2/146 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R ++ E ++ +++ + + + ++ L L ++ L R Sbjct: 267 RVYLDETERKLKRALSHAVEEKRNQVMQRAQRLSYL--HPLVKLNEKRQQAVDLEERFRQ 324 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + ++K +S+ L + L +G++ +Q+ I + ++ + I Sbjct: 325 RMQERLKEAKHGLSVRAERLNGLSPVRKLGQGFSYVQNEIGVNIRKIEDVCPGEILSIKV 384 Query: 490 FDGQANAIVINKAPPKEQPTKKCQLH 515 DG A V E K Q Sbjct: 385 TDGTIRAQVTEVEKEAEDGGKHSQRE 410 >gi|167835696|ref|ZP_02462579.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis MSMB43] Length = 328 Score = 290 bits (741), Expect = 6e-76, Method: Composition-based stats. Identities = 110/313 (35%), Positives = 178/313 (56%), Gaps = 8/313 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF+P EG + V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFMPREGDKIEVRALVTMYEPRGEVQLNVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRPLPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ETANARRE------VDVLIVCRGGGSIEDLWSFNDEGLARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGDRRNALARGLRRGLDSRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYR 327 + + L Sbjct: 314 ISPAERLQRQSMH 326 >gi|188586316|ref|YP_001917861.1| exodeoxyribonuclease VII, large subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|226697595|sp|B2A531|EX7L_NATTJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|179351003|gb|ACB85273.1| exodeoxyribonuclease VII, large subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 423 Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats. Identities = 133/416 (31%), Positives = 235/416 (56%), Gaps = 13/416 (3%) Query: 16 SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS+L+ +LK+++ + NL +V VRGEIS ++ HSSGH YF+LKD + + ++++ Sbjct: 7 TVSQLTNYLKNLLLQDHNLKNVLVRGEISNFKH-HSSGHMYFTLKDEGASLRCVMFRNRN 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F P++G++ +V G + F + YQ+ +E + G G+L A E+ K+KL EEG+F Sbjct: 66 WNLDFSPQDGMDVIVQGVVGIFERAGLYQLYVEKMYSHGLGSLHLAFEQLKEKLAEEGIF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 ++++K +P PK IAV+TSPTGA +RD++ IS RFPL +++ PV+VQG+ EI Sbjct: 126 NEEYKKTLPPFPKKIAVVTSPTGAAVRDMIVTISRRFPLTSILLIPVRVQGEYAASEIRA 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I N++ D+I++ RGGGS+E++W FN E + RAI +S P+IS +GHETD Sbjct: 186 GIDYANSI------DDIDVILVGRGGGSLEEIWPFNTEEVARAIFSSKAPVISCVGHETD 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T++D+ +DLRAPTPT AAE+ VP + L+ + + + RL + + + LL Sbjct: 240 FTISDFVSDLRAPTPTAAAELVVPDQVELKRQVSDYKHRLTKALYHKYRNLDQRVVELLD 299 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + N +S + L+ L + L + + K ++ ++ ++ S + + + Sbjct: 300 RPVMKNPYTLISERKKELEYLDQRLLREVYHLFKLKRNKYSSLVEQLDSLSPLKTLGRGY 359 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH-MLREQTKNRIFYLHTHIKKLIT 425 I + V + L+ +++E+ ++ I H+++ L Sbjct: 360 TFCQTHDGDIVRSVTDIEQEDILKLTFFDGSAKCLVKEKQEHHISEDHSNLNSLCN 415 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 2/133 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++ + + + + + + R + E + + + I ++ L R+ Sbjct: 269 KRQVSDYKHRLTKALYHKYRNLDQRVVELLDR--PVMKNPYTLISERKKELEYLDQRLLR 326 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + H K S L S + TL RGYT Q + + + ++ + + + F Sbjct: 327 EVYHLFKLKRNKYSSLVEQLDSLSPLKTLGRGYTFCQTHDGDIVRSVTDIEQEDILKLTF 386 Query: 490 FDGQANAIVINKA 502 FDG A +V K Sbjct: 387 FDGSAKCLVKEKQ 399 >gi|187779510|ref|ZP_02995983.1| hypothetical protein CLOSPO_03106 [Clostridium sporogenes ATCC 15579] gi|187773135|gb|EDU36937.1| hypothetical protein CLOSPO_03106 [Clostridium sporogenes ATCC 15579] Length = 401 Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats. Identities = 124/376 (32%), Positives = 221/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+++ + Sbjct: 3 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKVNCV 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F+PE G++ + +G ++ + YQ+ ++ + G G L A E+ K+KL Sbjct: 62 MFKSYAYNLKFVPENGMDVVTLGNVSVYEKEGSYQLYVKEIKREGLGDLYVAFERLKEKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLFS+ HK IP K I +ITSPTGA ++DI+ R + ++I+P VQG + Sbjct: 122 KEEGLFSELHKKEIPKFSKKIGIITSPTGAALKDIINVTKRRNKGIELLIYPALVQGLDA 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 K + I LN +++ DIIILARGGGSIE+LW FN+E + + NS PII+ Sbjct: 182 SKTLIEGIKTLNKVED------VDIIILARGGGSIEELWAFNNEDLAYEVYNSKKPIITG 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+AV +E L ++N + + N + +IK K N Sbjct: 236 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLIKEILNYKYNIKNSMENIIKEKRNY 295 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + + +D L L ++ + ++ + + + + +++ ++ Sbjct: 296 LNLYKQRIESNSPINIIVNEYKNIDNLKELLNMKIKGKLNKEKNNLSRLSSLLEAHNPLN 355 Query: 365 NIQKNRQHILEKQQHI 380 ++K + +++ ++ Sbjct: 356 VLKKGYTLVEDEENNL 371 Score = 84.8 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 46/102 (45%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ ++S + +L++ N Sbjct: 297 NLYKQRIESNSPINIIVNEYKNIDNLKELLNMKIKGKLNKEKNNLSRLSSLLEAHNPLNV 356 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 LK+GYT ++D NN IT+K L +I I F DG+A + Sbjct: 357 LKKGYTLVEDEENNLITEKEALKELNKINITFKDGKAKLNIK 398 >gi|270292606|ref|ZP_06198817.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M143] gi|270278585|gb|EFA24431.1| exodeoxyribonuclease VII, large subunit [Streptococcus sp. M143] Length = 446 Score = 289 bits (740), Expect = 7e-76, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 231/500 (46%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G GTL E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGTLAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K P+P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQGD + Sbjct: 120 EGLFQERFKQPLPQFAKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGDGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N + D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQRAD------LDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A P+ + S + + + ++ + + Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPITKLDLLSHLQNQEKRMATAVQNVLSRKKEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDSNQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLRSQMALVYDAKVAEVKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVEMLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|328945560|gb|EGG39711.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK1087] Length = 446 Score = 289 bits (740), Expect = 7e-76, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IPIIS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A V + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRFQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|327473382|gb|EGF18802.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK408] Length = 446 Score = 289 bits (740), Expect = 7e-76, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQEKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IPIIS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPIISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A V + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|221633674|ref|YP_002522900.1| exodeoxyribonuclease VII large subunit [Thermomicrobium roseum DSM 5159] gi|221156151|gb|ACM05278.1| exodeoxyribonuclease VII, large subunit [Thermomicrobium roseum DSM 5159] Length = 405 Score = 289 bits (739), Expect = 9e-76, Method: Composition-based stats. Identities = 136/490 (27%), Positives = 223/490 (45%), Gaps = 100/490 (20%) Query: 17 VSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 V+ L+ +K ++E NL + VRGEI+ R +SGH YF+L++ + + ++++ Sbjct: 9 VAALTRFIKDLLEEHPNLRLLRVRGEITNARTY-ASGHWYFNLREGEAILRCVLFRSQAQ 67 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + +LP +G E + G + + YQ+ +E L P G G L E+ K+KL EGLF Sbjct: 68 LLTYLPRDGDEAIASGSLGVYERDGVYQLYVEHLQPLGDGALRQQFERLKEKLEREGLFD 127 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K P+P P+ IAV+TSP GAV DI + R+P + +++ P +VQGD+ + + A Sbjct: 128 QRRKRPLPLRPRCIAVVTSPHGAVWHDIQTILRRRYPYVHLLLAPARVQGDDAVETLIAA 187 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + R +++I+ARGGGS+EDLW FNDE + RAI S IP++SAIGHETDW Sbjct: 188 LESV------QLDGRAEVVIIARGGGSLEDLWCFNDERLARAIYASRIPVVSAIGHETDW 241 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ DY ADLRAPTP+ AAE+ P + +L++ Sbjct: 242 TICDYVADLRAPTPSAAAELVTP----------------------------HDRRTLVRQ 273 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + ++ L R + R H + +R+ +H + RQ + Sbjct: 274 LVDLEERLEALATR--------------RLVRTRDHVGQLQHRLHRAAPLHRMDNLRQRL 319 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + Q I++ + + + Sbjct: 320 DQSAQRIDRAI------------------------------------------LLRLARQ 337 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDG 492 + V R L+ + L RGY +D + + R ++ + ++F DG Sbjct: 338 R-----QHVQALGRELELLSPYGPLARGYLLAEDSASGEVVRSIRQVSLGQALRLHFSDG 392 Query: 493 QANAIVINKA 502 QA IV + Sbjct: 393 QAETIVRSIE 402 >gi|24379058|ref|NP_721013.1| exodeoxyribonuclease VII large subunit [Streptococcus mutans UA159] gi|31563129|sp|Q8DVB5|EX7L_STRMU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|24376955|gb|AAN58319.1|AE014902_7 putative exodeoxyribonuclease VII, large subunit [Streptococcus mutans UA159] Length = 447 Score = 289 bits (739), Expect = 9e-76, Method: Composition-based stats. Identities = 151/494 (30%), Positives = 227/494 (45%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATMWSGI 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E G Sbjct: 63 YRKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAVQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK + K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FDDRHKQRLSQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLFPTKVQGEGAAQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + I N + D++I+ RGGGSIEDLW FN+E++V+AI S +PIIS++GHET Sbjct: 183 DNIRLANERTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESHLPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL---INLEARLNNIIIRLIKYKINTLN 308 D TLAD+AAD RA TPT AAE+A PV + + + + + + K + Sbjct: 237 DTTLADFAADRRAATPTAAAELATPVTKADLLAFLKERQMRSYQAVMRLIRQKDEQVKKL 296 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LD L L + + + + R+ S L IQ+ Sbjct: 297 QRSVIFRQPERLYDAYVQKLDHLRTHLLTKVRQVYDVYDSKEHLLRQRLLSFNLSGCIQR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + Q+ + Sbjct: 357 YQAQLKQDQRLLL----------------------------------------------- 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +S + S L S + RGY +Q +N+ I + + R+ + Sbjct: 370 SHMSSQYDSKLARFEKAQDALLSLDTTRIVARGYAIVQ-KDNHIIQSTQQIKKGDRLHLE 428 Query: 489 FFDGQANAIVINKA 502 DGQ V N Sbjct: 429 MKDGQVQVEVENVK 442 >gi|313673624|ref|YP_004051735.1| exodeoxyribonuclease vii, large subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940380|gb|ADR19572.1| exodeoxyribonuclease VII, large subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 450 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 131/505 (25%), Positives = 227/505 (44%), Gaps = 60/505 (11%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +VSE++ +K+++E++ + V V+GEIS SGH YF+LKD+ ++I + Sbjct: 1 MAMKILTVSEITKLIKNLIENSFNEVISVQGEISNLSTSP-SGHLYFTLKDSGAQIKVAL 59 Query: 69 WKGTLN-KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ L + P+ G +V G IT + YQII + + S G E+ K KL Sbjct: 60 FRKYLALNRGYSPKNGDLVVVTGDITVYEQDGVYQIIAKKIEYSAVGLFYKKFEETKLKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EGLF K IP K IAV+TSP+GA I+D L+ + L++ ++PV+VQG Sbjct: 120 EREGLFDSLRKKQIPLFIKKIAVLTSPSGAAIKDFLKILKDNGVCLKIDLWPVQVQGISA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI +I ++++ D++IL RGGGS+EDL FN+E+I R + + IP I+A Sbjct: 180 INEIVESIKKVSS------HADYDLMILMRGGGSLEDLAIFNEEVIARGLVDCPIPTITA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHE D T+ D+ AD R+PTPT AA + V + L + E + + + Sbjct: 234 IGHERDVTIVDFVADFRSPTPTAAAGVIVERYRQITDLLFDGEKYIIREMENRLYRSSQR 293 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 +++L L + L L L++N+ + I +I +K + Sbjct: 294 IDNLALRLDKNSPLSKLRRVNTFLALCIETLKNNINLKINELNGRLEYINAMLKKNTPQV 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + ++ I ++ ++ K Sbjct: 354 KLNLAKKDIFNLEERMK---------------------------------------KDFK 374 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ L I + +L++ +N LK+GY + + IT + ++ + Sbjct: 375 KRLSSSLDRII--------MFESVLKNLDPENLLKKGYCIAFR-DKSVITDVKQISLEDN 425 Query: 485 ILINFFDGQANAIVINKAPPKEQPT 509 + I +G + +V+ K +E+ Sbjct: 426 LEIKMKNGYIHTLVVGKKNLEERNG 450 >gi|32472607|ref|NP_865601.1| exodeoxyribonuclease VII large subunit [Rhodopirellula baltica SH 1] gi|81835441|sp|Q7UTZ9|EX7L_RHOBA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|32443844|emb|CAD73285.1| exodeoxyribonuclease VII large subunit [Rhodopirellula baltica SH 1] Length = 442 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 180/353 (50%), Gaps = 9/353 (2%) Query: 19 ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78 EL+ +K VES V V GEI+ SGH YF+LKD S+I ++W+ ++ F Sbjct: 45 ELTRQIKSTVESGFPGVWVAGEITDI-ARPRSGHLYFTLKDERSQIRGVMWRSVAERLPF 103 Query: 79 LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138 ++G L +G + + YQ+++ P G G L A + + KL EGLF + K Sbjct: 104 ELDDGQSVLCMGDVEVYAARGSYQLVVRKCQPQGMGALQLAFAQLQAKLQAEGLFEPERK 163 Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQL 197 +P +P+ +A++TSPTGA I+D LQ + R + +++ P VQG + + + + Sbjct: 164 RLLPRVPRRVAIVTSPTGAAIQDFLQAAAQRHAGIEIVLIPASVQGPGSVESLIDGMRAA 223 Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257 + + P+PD++I++RGGGS+EDLW FNDE +VRAIA S IP +SA+GHE D TLAD Sbjct: 224 HRM-----RPQPDVLIVSRGGGSLEDLWSFNDEQLVRAIAASRIPTVSAVGHEIDVTLAD 278 Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LP 315 AD+RA TPT AA +P ++ + ++L L + + R + + L + Sbjct: 279 LVADVRALTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQ 338 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 N + + +D + + + + + + + + Sbjct: 339 NPFEMVHDRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLAR 391 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 12/145 (8%), Positives = 45/145 (31%), Gaps = 2/145 (1%) Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIF 414 + + +R ++ + Q++ +L +++++ + + + Sbjct: 286 LTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQNPFEMVH 345 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + R + +++ ++ + + L RGY+ Q + Sbjct: 346 DRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLARGYSVTQTDAGKVVR 405 Query: 475 QKRNLATKTRILINFFDGQANAIVI 499 ++ + DG ++V Sbjct: 406 STGDVQPGDSLRTRLTDGDVISVVS 430 >gi|168703801|ref|ZP_02736078.1| Exonuclease VII, large subunit:nucleic acid binding, OB-fold, tRNA/helicase-type [Gemmata obscuriglobus UQM 2246] Length = 432 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 119/398 (29%), Positives = 201/398 (50%), Gaps = 5/398 (1%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S +VS+L+ ++ +E+ V V GE+S + SSGH YF+LKD ++ Sbjct: 1 MSAVPKPAVQPLTVSQLTAQVRGTLEAKFLSVWVAGEVSNFT-RASSGHWYFTLKDATAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I + ++G ++ F G+E + G++T + +YQ ++E + P G G AL + Sbjct: 60 IKTVAFRGINLRLRFDLRNGMEIIARGRLTVYDPKGEYQFVVEEVQPKGVGGAELALRQL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182 K+KLL +G FS K P+P P+ + +I S TGA +RD+++ + R+P +++ P +VQ Sbjct: 120 KEKLLAKGYFSPARKRPLPRPPQRVGLIASATGAAVRDMIEVFAQRWPFTELVVRPSRVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ +++A A+LQLN L D I+L RGGGS EDLW FN+E++ A+ S +P Sbjct: 180 GEGAAQDVARALLQLNWLHRNNK-LAFDAIVLGRGGGSAEDLWAFNEEVVADAVFKSEVP 238 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SA+GHETD T+AD AD RA TPT A P + L +SL L R+ + R ++ Sbjct: 239 VVSAVGHETDVTVADLVADHRAETPTAAVIALTPDRRELLASLGELRERMGESVARRLRL 298 Query: 303 KINTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L+ + +A Q + S RLD + L + + + +++S Sbjct: 299 AKQRLDQIAARQAFRLPLQRVHNSGQRLDDIAERLHRAARHRLLQAAQELAGRSAQLESL 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + + + + V L + + Sbjct: 359 SPLQVLGRGYSLTHTGDGRLVREVDHLRPGDLLLTRVR 396 Score = 114 bits (285), Expect = 4e-23, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 1/159 (0%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQTKNRIFYLHTHIKKLITRI 427 R+ + + E++ + R + L K+ I R+ + + R+ Sbjct: 274 RRELLASLGELRERMGESVARRLRLAKQRLDQIAARQAFRLPLQRVHNSGQRLDDIAERL 333 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 H++ ++ + L+S + L RGY+ + + + +L +L Sbjct: 334 HRAARHRLLQAAQELAGRSAQLESLSPLQVLGRGYSLTHTGDGRLVREVDHLRPGDLLLT 393 Query: 488 NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQG 526 G ++V P + T ++ + G Sbjct: 394 RVRGGTVRSLVTATEPTDPERTNPGARDSDPDQTPAAGG 432 >gi|309389166|gb|ADO77046.1| exodeoxyribonuclease VII, large subunit [Halanaerobium praevalens DSM 2228] Length = 419 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 133/371 (35%), Positives = 208/371 (56%), Gaps = 12/371 (3%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 D YSV+E++ +LK++++ + L+ + GEIS + HSSGH Y +LKD +S++ ++ Sbjct: 14 DKKIYSVAEITKYLKNLIKEDPFLNDFWLSGEISNF-YHHSSGHMYLTLKDKNSQLKTVM 72 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +KG +K++F PE+G++ G + + +YQ + +G G L +K K +L Sbjct: 73 FKGDNSKLDFEPEDGMQVEAKGNLDIYSQRGEYQFYARQMKKAGKGKLYEKYQKLKSELE 132 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECP 187 +EGLF+ K IPF+ I ++TSPTGA +RDIL + R V+I P VQG Sbjct: 133 KEGLFAVSKKQEIPFLANKIGIVTSPTGAAVRDILSVMKRRSSNFSVLIVPAHVQGKLAQ 192 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 EI+ I LN+ D+II++RGGGSIEDLW FN+E + RAI NS +P+IS + Sbjct: 193 AEISAGIRYLNSR------NDIDLIIVSRGGGSIEDLWPFNEEKVARAIYNSKLPVISGV 246 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+AD+ ADLRAPTP+ AAE+A +E + + L NL RL N + IK N L Sbjct: 247 GHETDFTIADFVADLRAPTPSAAAELATANREEVLTRLDNLTKRLLNSSLTKIKESKNKL 306 Query: 308 NSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 NS+ K + + LD L +L H +E + + ++ + + Sbjct: 307 NSIEARKIFSSPAELFRDYEQELDNLETQLVHQIEKNYQDWENKYQLLHQKLNNLSPLKT 366 Query: 366 IQKNRQHILEK 376 + + + ++ Sbjct: 367 LDRGYTILQDQ 377 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 50/162 (30%), Gaps = 5/162 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + + E ++ + K+ L + KE L+ Sbjct: 248 HETDFTIADFVADLRAPTPSAAAELATANREEVLTRLDNLTKRLLNSSLTKIKESKNKLN 307 Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + L T++ + + + + L + + TL Sbjct: 308 SIEARKIFSSPAELFRDYEQELDNLETQLVHQIEKNYQDWENKYQLLHQKLNNLSPLKTL 367 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 RGYT +QD I + + + DG A + + Sbjct: 368 DRGYTILQDQTKKPIKSIKEIEIGDLVKARLTDGLAEVEIKD 409 >gi|327543065|gb|EGF29508.1| exodeoxyribonuclease VII large subunit [Rhodopirellula baltica WH47] Length = 442 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 109/353 (30%), Positives = 180/353 (50%), Gaps = 9/353 (2%) Query: 19 ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78 EL+ +K VES V V GEI+ SGH YF+LKD S+I ++W+ ++ F Sbjct: 45 ELTRQIKSTVESGFPGVWVAGEITDI-ARPRSGHLYFTLKDERSQIRGVMWRSVAERLPF 103 Query: 79 LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138 ++G L +G + + YQ+++ P G G L A + + KL EGLF + K Sbjct: 104 ELDDGQSVLCMGDVEVYAARGSYQLVVRKCQPQGMGALQLAFAQLQAKLQAEGLFEPERK 163 Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAILQL 197 +P +P+ +A++TSPTGA I+D LQ + R + +++ P VQG + + + + Sbjct: 164 RLLPRVPRRVAIVTSPTGAAIQDFLQAAAQRHAGIEIVLIPASVQGPGSVESLIDGMRAA 223 Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257 + + P+PD++I++RGGGS+EDLW FNDE +VRAIA S IP +SA+GHE D TLAD Sbjct: 224 HRM-----RPQPDVLIVSRGGGSLEDLWSFNDEQLVRAIAASRIPTVSAVGHEIDVTLAD 278 Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LP 315 AD+RA TPT AA +P ++ + ++L L + + R + + L + Sbjct: 279 LVADVRALTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQ 338 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 N + + +D + + + + + + + + Sbjct: 339 NPFEMVHDRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLAR 391 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 12/145 (8%), Positives = 45/145 (31%), Gaps = 2/145 (1%) Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIF 414 + + +R ++ + Q++ +L +++++ + + + Sbjct: 286 LTPTDAASRVLPDRDSMVAALDALGQMMATNLFRRVHSERQRLENWESRPVFQNPFEMVH 345 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + R + +++ ++ + + L RGY+ Q + Sbjct: 346 DRSREVDDWDERGRSAIWRRLEQAQAKLATVAAAQSALSPLAVLARGYSVTQTDAGKVVR 405 Query: 475 QKRNLATKTRILINFFDGQANAIVI 499 ++ + DG ++V Sbjct: 406 STGDVQPGDSLRTRLTDGDVISVVS 430 >gi|77919269|ref|YP_357084.1| exodeoxyribonuclease VII, large subunit [Pelobacter carbinolicus DSM 2380] gi|123729451|sp|Q3A3Z3|EX7L_PELCD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|77545352|gb|ABA88914.1| Exodeoxyribonuclease VII large subunit [Pelobacter carbinolicus DSM 2380] Length = 401 Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats. Identities = 128/354 (36%), Positives = 200/354 (56%), Gaps = 8/354 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVS L Y LK +VE N V V GEI+ + SSGH YF++KD+ +++ ++++ + Sbjct: 9 SVSRLVYLLKEVVEDNFVQVLVTGEIANFSA-PSSGHYYFAVKDDQAQLRGVMFRSSNRL 67 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++F PE G++ L G+++ +P + Q++++ + P G G+ A EK K KL EGLF Sbjct: 68 LKFTPENGMQVLCGGRVSLYPQRGELQLVVDRMEPLGVGSWQLAFEKLKTKLDAEGLFEV 127 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAI 194 K +P P+ I V+TSPTGA I DIL + R L V++ PV+VQGD EIA AI Sbjct: 128 GRKRRLPSFPRTIGVVTSPTGAAIHDILNVLRRRGAGLHVLLSPVRVQGDGAADEIARAI 187 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N + D++I+ RGGGS EDLW FN+E++ RA+ S IP+ISA+GHE D T Sbjct: 188 ADFNRHGQA------DVLIVGRGGGSPEDLWAFNEEVVARAVFASRIPVISAVGHEVDVT 241 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D ADLRAPTP+ AAE+ V ++ L+ + +L RL+ + + L+ L + L Sbjct: 242 ISDLVADLRAPTPSAAAELVVQGRQELERHVDHLVMRLSGQMQGRLSLLKERLDGLRRRL 301 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L L++L + L +E + R +R+ + + + + Sbjct: 302 RSPVDDLRRQYRDLEQLRKRLFSAMEKTMQRAANRLGLAGSRLHALSPLATLDR 355 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 24/228 (10%), Positives = 72/228 (31%), Gaps = 5/228 (2%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 ++ + I ++ + + + + + + + + R Sbjct: 170 SPVRVQGDGAADEIARAIADFNRHGQADVLIVGRGGGSPEDLWAFNEEVVARAVFASRIP 229 Query: 339 LEIII-FRKYRHFNHIINRIKSDFLIHNIQ---KNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + ++ +++ + + RQ + H+ + ++ Sbjct: 230 VISAVGHEVDVTISDLVADLRAPTPSAAAELVVQGRQELERHVDHLVMRLSGQMQGRLSL 289 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 KE++ L + + + +++L R+ + ++ + + L + + Sbjct: 290 LKERLDGLRRRLRSPVDDLRRQYRDLEQLRKRLFSAMEKTMQRAANRLGLAGSRLHALSP 349 Query: 455 KNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINK 501 TL RGY + + + R L R+ I F G A V Sbjct: 350 LATLDRGYAIVFSAKTSTIVRDARTLTPGDRVQIRFAKGSVEATVDEV 397 >gi|170759118|ref|YP_001787213.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A3 str. Loch Maree] gi|226694645|sp|B1KT53|EX7L_CLOBM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|169406107|gb|ACA54518.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A3 str. Loch Maree] Length = 401 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 219/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+I+ + Sbjct: 1 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F E G++ + +G ++ + YQ+ ++ + G G L A EK K+KL Sbjct: 60 MFKSYAYNLKFALENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF D HK IP K I VITSPTGA I+DI+ R + ++I+P VQG + Sbjct: 120 KEEGLFDDAHKKEIPKFSKKIGVITSPTGAAIKDIINVTKRRNKGIELLIYPALVQGTDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 K + I LN +++ DIIILARGGGSIE+LW FN+E + A+ NS PII+ Sbjct: 180 SKTLIEGIKTLNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+A +E L + ++N + + N + +IK K N Sbjct: 234 VGHETDFTIIDFVSDRRAPTPSAAAEIAAFDREVLINEILNYKYNIKNSMENIIKEKRNY 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + ++ +D L L +E + ++ + + + + +++ ++ Sbjct: 294 LNLYKQKIEANSPTNIIANEYRNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K I ++ ++ Sbjct: 354 VLKKGYTLIEDEGNNL 369 Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 46/102 (45%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ ++S + +L++ N Sbjct: 295 NLYKQKIEANSPTNIIANEYRNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 LK+GYT I+D NN IT+K L +I I F DG+A + Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKELNKINIIFKDGRAKLSIK 396 >gi|254518732|ref|ZP_05130788.1| exodeoxyribonuclease VII [Clostridium sp. 7_2_43FAA] gi|226912481|gb|EEH97682.1| exodeoxyribonuclease VII [Clostridium sp. 7_2_43FAA] Length = 399 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 129/376 (34%), Positives = 218/376 (57%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+EL+ ++K ++++ +++ V+GE+S + HSSGH YFSLKD+ S+I+ + Sbjct: 1 MRIKTLTVNELNNYIKKTLDNDFILNNLLVKGEVSNLK-YHSSGHIYFSLKDSISKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EG+E + + + +PG+ Q+ IE L G G L EK KKKL Sbjct: 60 MFKSNSADLDFKLIEGMEVIANARCSIYPGTGSLQLYIEKLQKEGIGELHIKFEKLKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EG F +Q+K IP +PK I V+TS TGAVIRDI+ R + ++++P VQG+ Sbjct: 120 QDEGYFDEQYKKEIPKMPKRIGVVTSETGAVIRDIINVSKRRSSLIDIVLYPALVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 K I N I N D+II+ RGGGSIE+LW+FN+E + + I S +PIISA Sbjct: 180 YKTIINGIKYFN------DTKSVDVIIVGRGGGSIEELWNFNEEDLAKEIFKSKLPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D RA TP+ AAE+AVP++ + + N R+N I+ Y+ Sbjct: 234 VGHEVDFTISDFVSDYRASTPSQAAEIAVPLESDIMYEIDNYNKRINEIVFNKFSYEKEK 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L++ K L + + LS S LDR+ ++ + I ++ + + +++ I+ Sbjct: 294 LSNYKKILSLNSPEVILSNSYLELDRIEDRMKKLVFNKIEKEKLKIKSLNDILEAHNPIN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K + + +++I Sbjct: 354 VLKKGYTIVEDNEKNI 369 Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 2/129 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 I + I +IV Y + IL + + + + ++ R++ ++ Sbjct: 271 EIDNYNKRINEIVFNKFSYEKEKLSNYKKILS--LNSPEVILSNSYLELDRIEDRMKKLV 328 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 +KI+ + IL++ N LK+GYT ++D N I+ K + I F D Sbjct: 329 FNKIEKEKLKIKSLNDILEAHNPINVLKKGYTIVEDNEKNIISSKEEIKDLDEFNIIFKD 388 Query: 492 GQANAIVIN 500 G+ +I+ Sbjct: 389 GKVKGKIIS 397 >gi|315185824|gb|EFU19590.1| Exodeoxyribonuclease VII large subunit [Spirochaeta thermophila DSM 6578] Length = 414 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 123/363 (33%), Positives = 189/363 (52%), Gaps = 10/363 (2%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ +SVSE++ +K +E +V V+GEIS R S+GH YFSLKD + ++ ++ Sbjct: 2 SIPQKVFSVSEITSLIKGYLEDAFPYVAVQGEISNCR-PSSTGHLYFSLKDERAVLNVVM 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++ F P++G+ L G ++ + YQ++ E L G G LL LEKRK+KL Sbjct: 61 FQSRYRRLSFQPKDGMMVLAKGALSVYEARGAYQLVCEELEQVGVGALLEMLEKRKQKLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187 EGLF + K PIP P IAV+TSPTGA +RDI+ ++ R + +++ P VQG+ Sbjct: 121 AEGLFDKERKRPIPLFPSRIAVVTSPTGAAVRDIINVLTRRNAGVDIVVVPAPVQGENAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 IA I + D+II+ARGGGSIEDL F++E++VRAIA P+ISA+ Sbjct: 181 PIIAEQIRR------ADAWKLGDVIIVARGGGSIEDLLPFSEEVVVRAIAACETPVISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+TL+D+AADLRAPTP+ AAEM +E L + + + I L + Sbjct: 235 GHEIDYTLSDFAADLRAPTPSAAAEMVSAHREELLQRVHHAHLTMVREIRSLCERLRFRL 294 Query: 307 LNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L R D + + + + + ++ Sbjct: 295 GKVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMREYLLKLRHRIEMAREITQAHSPRAV 354 Query: 366 IQK 368 + + Sbjct: 355 LSR 357 Score = 91.0 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 6/174 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + H E Q + +R I + L Sbjct: 236 HEIDYTLSDFAADLRAPTPSAAAEMVSAHREELLQRVHHAHLTMVREIRSLCERLRFRLG 295 Query: 404 MLREQTKNRIFYLH-----THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + E+ R+F L+ + I + + + + I Q+ + + L Sbjct: 296 KVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMREYLLKLRHRIEMAREITQAHSPRAVL 355 Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511 RGY ++D + + R R+ I G+ A APP+++ Sbjct: 356 SRGYAIVRDAATGDILRDTRAAFEGQRLSITLARGELEARTTQVAPPEDESATT 409 >gi|118442873|ref|YP_878053.1| exodeoxyribonuclease VII large subunit [Clostridium novyi NT] gi|158512406|sp|A0Q0A1|EX7L_CLONN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|118133329|gb|ABK60373.1| exodeoxyribonuclease VII, large subunit [Clostridium novyi NT] Length = 400 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 129/375 (34%), Positives = 212/375 (56%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + VSEL+ ++K++++++ + ++GEIS ++ IH SGH YFSLKD +S+I+ I Sbjct: 1 MQMKTLGVSELNNYIKNVIDNDFILKNSKIKGEISNFK-IHISGHIYFSLKDKNSKINCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++F+PE G ++ G+++ + YQ E + G G L A E KKKL Sbjct: 60 MFRSYARGLKFIPENGDNVILKGRVSVYQKDGAYQFYCEDIEKEGVGDLFIAFEALKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EGLF + +K IP K I VITSPTGA ++DI+ R + ++I+P VQG+ Sbjct: 120 YNEGLFDEYNKKEIPRFAKKIGVITSPTGAAVKDIINVSKRRNKGVELLIYPALVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 PK++ N I + D II+ARGGGSIE+LW FN+E + AI N + P+IS Sbjct: 180 PKDLINGINYFSNR------DDIDTIIIARGGGSIEELWAFNNEDLAYAIYNCNKPVISG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+ V + +++ N + RL N+I I K Sbjct: 234 VGHETDFTICDFVSDRRAPTPSAAAEIGVFNLNEVNTNIENYKNRLYNLIRNTINLKFKE 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LNSL A+ + T++ R+D L +L H +E I + + + + + ++ Sbjct: 294 LNSLENAIKINSPMNTIANEYIRIDNLKNKLCHKIESKIEYEKIKLSKANSLLNAHNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I +++ + Sbjct: 354 ILSRGFSIIKDEKNN 368 Score = 90.6 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 2/137 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 N+ + +I + + +++ + F E + + N I + I L Sbjct: 264 NLNEVNTNIENYKNRLYNLIRNTINLKFKELNSLENAIKI--NSPMNTIANEYIRIDNLK 321 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + KI+ +S +L + N L RG++ I+D NN IT K + T Sbjct: 322 NKLCHKIESKIEYEKIKLSKANSLLNAHNPLNILSRGFSIIKDEKNNVITTKEKIEENTC 381 Query: 485 ILINFFDGQANAIVINK 501 I I DG + + Sbjct: 382 INITLKDGSTKVRISDV 398 >gi|291542869|emb|CBL15979.1| exodeoxyribonuclease VII, large subunit [Ruminococcus bromii L2-63] Length = 404 Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats. Identities = 131/360 (36%), Positives = 207/360 (57%), Gaps = 11/360 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SVS+L++++K I+E++ L+ V V GEIS + SGH Y S+KD S I A+++ G Sbjct: 11 VLSVSQLNFYIKSIIENDARLNFVFVTGEISNLTDHYRSGHIYLSIKDEKSVIRAVMFAG 70 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++F P +G + + G++ + + +YQ+ IE + P G GTL A E+ KK L E+G Sbjct: 71 NARNLKFRPTDGTKVICRGRVAVYEPTGQYQLYIEDMQPDGIGTLSLAYEQLKKSLAEKG 130 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+ +HK IP P I VITSPTGA ++DI +S RFP +I+ PV VQGD P ++ Sbjct: 131 LFAPEHKKKIPPFPNSIGVITSPTGAAVQDIRNILSRRFPSADIIMCPVLVQGDNAPAQL 190 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +A+ +L+ D+II+ RGGGSIEDLW FNDE + AI N IP+ISA+GHE Sbjct: 191 IDAVQKLDK------YNACDVIIIGRGGGSIEDLWAFNDENLAYAIYNCKIPVISAVGHE 244 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+ D+ +DLRAPTP+ AAE+AVP L + + ++++ ++ + N L L Sbjct: 245 TDFTICDFVSDLRAPTPSAAAELAVPDTAELVDYYKSQKQYVSSMATLKLRQEYNALTEL 304 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + Q + + +++H ++ I +K +++ + + + Sbjct: 305 KTRLSVVSPQQRIFEYEKSFELCKTKIQHFVQETINKKAADITKTAAKLEGLNPVKILSR 364 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 52/152 (34%), Gaps = 6/152 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----T 409 + +++ + E + + + L+ +++ L L+ + Sbjct: 254 SDLRAPTPSAAAELAVPDTAELVDYYKSQKQYVSSMATLKLRQEYNALTELKTRLSVVSP 313 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + RIF + T+I+ + I ++ T L+ L RGY+ + + Sbjct: 314 QQRIFEYEKSFELCKTKIQHFVQETINKKAADITKTAAKLEGLNPVKILSRGYSIAE-KD 372 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINK 501 + + L + + F DG+ A + Sbjct: 373 GKAVNSAKMLKSGDEFTLRFSDGEIKAKATGE 404 >gi|240145665|ref|ZP_04744266.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis L1-82] gi|257202254|gb|EEV00539.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis L1-82] Length = 408 Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats. Identities = 119/363 (32%), Positives = 199/363 (54%), Gaps = 13/363 (3%) Query: 11 DHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 D YSV +++ ++K++ + + V+GE+S + H+SGH YF++KD ++A++ Sbjct: 9 DENVYSVGQVNTYIKNMFAQDFMLQRISVKGEVSNCK-YHTSGHIYFTIKDAAGTLNAVM 67 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + G+ ++F +EG + +V G + + KYQI + G+G L E K++L Sbjct: 68 FAGSRKGLKFQMKEGDQVVVTGSVEVYERDGKYQIYAREIELDGAGNLYQKFEALKQELE 127 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 E G+F+ ++K PIP I V+T+PTGA ++DI + R P ++I++P VQGD Sbjct: 128 EMGMFAAEYKQPIPPYAMKIGVVTAPTGAAVQDIRNISARRNPFVQLILYPALVQGDGAV 187 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I N I L+ L D++I+ RGGGSIEDLW FN+E + RAI P+ISA+ Sbjct: 188 ESIVNGIHALDAL-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAV 240 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETDWT+AD+ ADLRAPTP+ AAE+AV ++ L ++ R+ + ++ I+ L Sbjct: 241 GHETDWTIADFVADLRAPTPSAAAELAVFDYAAVEGRLGEIKERMFLLNMQRIQQMRKEL 300 Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + + L R L +L + +E +I + + R++ + Sbjct: 301 EHAKDRLSYLSPEGQLREKRKYAADLEEQLRNRMEHMIELRRHKLALLSERLEGVSPVKK 360 Query: 366 IQK 368 + + Sbjct: 361 LAQ 363 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 2/130 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E ++ + + Q ++ + E + L L + ++ + L ++ + Sbjct: 277 RLGEIKERMFLLNMQRIQQMRKELEHAKDRLSYL--SPEGQLREKRKYAADLEEQLRNRM 334 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 H I+ +++ + L+ + L +GY+ + D N + +T + R+ I Sbjct: 335 EHMIELRRHKLALLSERLEGVSPVKKLAQGYSYVTDENGHTLTDAEGVKAGDRVKIRLLK 394 Query: 492 GQANAIVINK 501 G A V Sbjct: 395 GALEAEVTEV 404 >gi|168215450|ref|ZP_02641075.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens NCTC 8239] gi|182382408|gb|EDT79887.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens NCTC 8239] Length = 400 Score = 288 bits (737), Expect = 2e-75, Method: Composition-based stats. Identities = 119/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++K +VE++ ++ V+GEIS + HSSGH YFSLKD +S+++ I Sbjct: 1 MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG++ + ++ + YQ+ E++ +G G L K KK+L Sbjct: 60 MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEG+F +++K +P PK I +IT+ TGA +RDI+ I R L +I++P KVQG+ Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D+IIL RGGGSIE+LW FN+ + I NS IP +SA Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RAPTP+ A E+ P + + + L+N + L+ I R Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSSAGELVSPSLQEMINDLVNKKEFLHRAIDRKFLNAKRD 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L K L N + ++ L +L + I + + + +++ ++ Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I++K+ Sbjct: 354 TLGRGYSVIMDKKDK 368 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 6/136 (4%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKL 423 +Q+ ++ K++ + + + FL K + +LH K+ I + L Sbjct: 265 LQEMINDLVNKKEFLHRAI----DRKFLNAKRDVDLLHKGLKGNNPKHIIEKRIKEVNSL 320 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 ++ F+ KI + ILQ+ NTL RGY+ I D + I + L Sbjct: 321 EEKLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKKDKVINKVSELKKND 380 Query: 484 RILINFFDGQANAIVI 499 + + DG N + Sbjct: 381 MVKVIMKDGSVNIDIK 396 >gi|290580923|ref|YP_003485315.1| putative exodeoxyribonuclease VII large subunit [Streptococcus mutans NN2025] gi|254997822|dbj|BAH88423.1| putative exodeoxyribonuclease VII large subunit [Streptococcus mutans NN2025] Length = 447 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 151/494 (30%), Positives = 227/494 (45%), Gaps = 62/494 (12%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD + I A +W G Sbjct: 5 LSVSSLTKYLKLKFDRDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQATMWSGI 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E G Sbjct: 63 YRKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAVQFEQLKKKLAEAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK + K I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +E+A Sbjct: 123 FDDRHKQRLSQFVKKIGVVTSPSGAVIRDIITTVSRRFPGVDILLFPTKVQGEGAAQEVA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + I N + D++I+ RGGGSIEDLW FN+E++V+AI S +PIIS++GHET Sbjct: 183 DNIRLANERTD------LDLLIVGRGGGSIEDLWAFNEEIVVQAIFESHLPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL---INLEARLNNIIIRLIKYKINTLN 308 D TLAD+AAD RA TPT AAE+A PV + + + + + + K + Sbjct: 237 DTTLADFAADRRAATPTAAAELATPVTKADLLAFLKERQMRSYQAVMRLIRQKDEQVKKL 296 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ +LD L L + + + + R+ S L IQ+ Sbjct: 297 QRSVIFRQPERLYDAYVQKLDHLRTHLLTKVRQVYDVYDSKEHLLRQRLLSLNLSGCIQR 356 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + Q+ + Sbjct: 357 YQAQLKQDQRLLL----------------------------------------------- 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +S + S L S + RGY +Q +N+ I + + R+ + Sbjct: 370 SHMSSQYDSKLARFEKAQDALLSLDTTRIVARGYAIVQ-KDNHIIQSTQQIKKGDRLHLE 428 Query: 489 FFDGQANAIVINKA 502 DGQ V N Sbjct: 429 MKDGQVQVEVENVK 442 >gi|324993387|gb|EGC25307.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK405] Length = 446 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 153/500 (30%), Positives = 233/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ +KKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLRKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A V + L L E R++ + + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAMSNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPFSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|303232264|ref|ZP_07318963.1| exodeoxyribonuclease VII, large subunit [Atopobium vaginae PB189-T1-4] gi|302481674|gb|EFL44735.1| exodeoxyribonuclease VII, large subunit [Atopobium vaginae PB189-T1-4] Length = 451 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 131/498 (26%), Positives = 198/498 (39%), Gaps = 56/498 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNHSRIDAIIW 69 SV + K + S+L +CV GE+SG+RG SGH YF LKD + +D IIW Sbjct: 4 TQSYLSVFDAVTLAKDAL-SSLPSICVAGEVSGFRGPNARSGHCYFQLKDAQASMDTIIW 62 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + T ++G++ G + + S K +I S G G L + KKL Sbjct: 63 RSTYENANIELKDGMQIEARGSFSVYAASGKMSFVITSFHLVGEGALRQQVALLAKKLQA 122 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI-IFPVKVQGDECPK 188 EGL D K IP I V TS +G+VI D+ + ++ R PL VI + VQG P+ Sbjct: 123 EGLMDDARKRSIPRFCNRICVCTSLSGSVIDDVKRTLARRNPLVVIQVVGCAVQGAHAPE 182 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I A+ PD I+L RGGGS EDL FNDE + RA+A S+IP+I+ IG Sbjct: 183 TICRALRVAQEA-------APDAILLVRGGGSFEDLMCFNDERVARAVAASTIPVITGIG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D ++ D +D R TPT AAE P +L L+ L RL +++ +T+ Sbjct: 236 HEPDVSICDLVSDRRTSTPTAAAESVAP-------ALDELQHVLAQRQDRLQQWRRSTIT 288 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L S + L ++ + R + + + Sbjct: 289 QASSELAQSRERLLRAQRSC--------------LSRAASYVASLAQHQCLLSSNGFLID 334 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R + + + ++ ++ Sbjct: 335 KRTQLELTSERFYAARG-------------------------RMLTPAAQMLQTNTANMQ 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 I + S +V + L++ LKRGY+ +QD + IT I I Sbjct: 370 HIARSLVSSKKHAVDLLATSLEALNPLYALKRGYSLVQDERGHVITSACACTPGDDISIW 429 Query: 489 FFDGQANAIVINKAPPKE 506 G +A V + + Sbjct: 430 LKSGAVSAHVTSVDADAQ 447 >gi|34556985|ref|NP_906800.1| exodeoxyribonuclease VII large subunit [Wolinella succinogenes DSM 1740] gi|34482700|emb|CAE09700.1| EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT [Wolinella succinogenes] Length = 422 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 124/493 (25%), Positives = 211/493 (42%), Gaps = 85/493 (17%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSEL+ +K ++E+ V VRGE+S H+SGH Y +LKD+ S I A+++KG Sbjct: 4 VLSVSELNIQVKSLLEATFLQVAVRGEVSNLT-YHTSGHIYLTLKDSSSSIRAVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++++F E G++ + G + + +YQII ++ P+G G+L A E+ KK+L G F Sbjct: 63 SRLKFRLENGMDVTLYGGLGVYTPRGEYQIIAQNAEPTGVGSLALAFEQLKKELAALGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 HK P+P P IA++TS TGA ++D+L+ + R+P +++I VQG+ + IA Sbjct: 123 DPAHKKPLPPFPSTIALLTSATGAALQDMLRVATKRWPLVKIIGLNTLVQGEGAKESIAK 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I ++L D+I++ RGGGS+EDLW FN+ ++ AI ++ PI+SA+GHE D Sbjct: 183 NIAYADSL-------GVDVIVVGRGGGSLEDLWAFNERIVAEAIYHAKTPIVSAVGHEVD 235 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 ++D+ ADLRAPTP+ A E+ +P Sbjct: 236 VVISDFVADLRAPTPSSAMELILPDCSEWLI----------------------------- 266 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 RLD E I+ ++ + + + L +++ Sbjct: 267 --------------RLDGFLDEFRRAFNRILQKRESELKSLQDSLDRLSLAARLKERESR 312 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I E + Q + ++++ + ++ R E Sbjct: 313 IKELWSSLNQAM-------------------------RHQLRRQESQLEPWRGRFEGAWE 347 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYT-SIQDTNNNFITQKRNLATKTRILINFFD 491 + V+ + +GY + + L D Sbjct: 348 MLWRFKTQEVAGYIERYKEADPLKWCHKGYAQVVSHKE---VKTLEALERDEVF--ELLD 402 Query: 492 G--QANAIVINKA 502 G + A V+ K Sbjct: 403 GKWRVQAKVLEKE 415 >gi|313901603|ref|ZP_07835042.1| Exodeoxyribonuclease VII large subunit [Thermaerobacter subterraneus DSM 13965] gi|313468133|gb|EFR63608.1| Exodeoxyribonuclease VII large subunit [Thermaerobacter subterraneus DSM 13965] Length = 481 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 129/360 (35%), Positives = 201/360 (55%), Gaps = 12/360 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +VSEL+ ++ +ES+ L V VRGE+S + HSSGH YFSL+D + + ++++ Sbjct: 70 VLTVSELTARIRLRLESDARLRQVWVRGELSSCK-RHSSGHLYFSLQDEGATLRCVMFRS 128 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F PE+G+E L +G++ + + YQ+ +E+L P+G G L ALE+R+++L EG Sbjct: 129 AARHLGFTPEDGMEVLALGRVGVYEPAGTYQLYVETLEPAGLGALYLALEQRRQRLAREG 188 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF K P+P P+ I VITS GA +RDIL+ R P L+V++ PV VQG+ + I Sbjct: 189 LFDPARKRPLPAWPRCIGVITSADGAALRDILKVALRRNPRLQVVVAPVPVQGEGAAQAI 248 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI + N R D++I+ RGGG+ EDLW FN+E +VRA+A S IP++SA+GHE Sbjct: 249 AEAIRRFNR------WGRADVLIVGRGGGAREDLWAFNEEEVVRAVAASRIPVVSAVGHE 302 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL--EARLNNIIIRLIKYKINTLN 308 D TL D AAD+RAPTP+ AAE+ P ++ L L + Sbjct: 303 VDVTLCDLAADVRAPTPSAAAEVVAPELAPMERRLAELSGRLEGGVRRRLERARRRLEEL 362 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + Q ++ R RL+RL ++L + + R+++ + + + Sbjct: 363 AGRPGLRHPAQQVAAWRQRLERLRQDLARAAGWRVAGGRQRLASATGRLEALSPLSVLGR 422 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 14/105 (13%), Positives = 40/105 (38%) Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465 ++ +++L + ++ ++ T L++ + + L RGY+ Sbjct: 368 LRHPAQQVAAWRQRLERLRQDLARAAGWRVAGGRQRLASATGRLEALSPLSVLGRGYSIT 427 Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 + + +T+ + R+ + G+ +A V+ P + P Sbjct: 428 RTRDGRVVTRAGQVRPGDRVEVLLARGRLDAQVLASWPGEGTPLP 472 >gi|332362898|gb|EGJ40691.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK49] Length = 446 Score = 288 bits (736), Expect = 2e-75, Method: Composition-based stats. Identities = 153/500 (30%), Positives = 234/500 (46%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKTVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ +KKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLRKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A V + L L E R++ + + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATSVTKLDLLGHLQQQENRMSRAMSNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|323484854|ref|ZP_08090210.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum WAL-14163] gi|323401850|gb|EGA94192.1| exodeoxyribonuclease 7 large subunit [Clostridium symbiosum WAL-14163] Length = 404 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 191/360 (53%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV++++ ++K++ + S + V+GE+S + HSSGH YF+LKD I A+++ G Sbjct: 7 VYSVAQVNAYIKNMFAQDFALSRISVKGEVSNCK-YHSSGHIYFTLKDGLGAIQAVMFAG 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F+ EEG + +V G + + +YQ+ + G+G L EK + +L E G Sbjct: 66 KRRGLNFVLEEGQQVVVKGSVEVYERDGRYQLYAAEITLDGTGDLFKRFEKLRNELEEMG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ ++K+PIP + ++T+ TGA IRDI+ R P +++++ P +VQG+ I Sbjct: 126 MFAPEYKSPIPKYAMKVGIVTASTGAAIRDIINIARRRNPYVQLVLCPAQVQGEGAASSI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A I L+ + D++I+ RGGGSIEDLW FN+E + RAI P+ISA+GHE Sbjct: 186 ARGIETLDAM-------GLDVLIVGRGGGSIEDLWAFNEETVARAIFACKTPVISAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV + L +L + + L Sbjct: 239 TDVTIADYVADLRAPTPSAAAELAVFDYALFEGQLREAGQKLYRALSGRKEMAAYRLEQY 298 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L N ++ L+ R RL +E L+ + + + R+ + I K Sbjct: 299 RLRLRLYNPERQLNEKRQRLADAEERMERLLKQKLTDRKHRLALLSGRLHGLSPLEKISK 358 Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 46/134 (34%), Gaps = 2/134 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E Q + + + R + + L + + ++ + R+E +L Sbjct: 272 QLREAGQKLYRALSG--RKEMAAYRLEQYRLRLRLYNPERQLNEKRQRLADAEERMERLL 329 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 K+ +++ + L + + +G+ + + + ++ +LI D Sbjct: 330 KQKLTDRKHRLALLSGRLHGLSPLEKISKGFGFLTGEDGKRVESAESVKAGDHLLIRVLD 389 Query: 492 GQANAIVINKAPPK 505 G+ A V+ Sbjct: 390 GRIEAEVVKAEKSG 403 >gi|256828742|ref|YP_003157470.1| exodeoxyribonuclease VII, large subunit [Desulfomicrobium baculatum DSM 4028] gi|256577918|gb|ACU89054.1| exodeoxyribonuclease VII, large subunit [Desulfomicrobium baculatum DSM 4028] Length = 456 Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats. Identities = 119/507 (23%), Positives = 207/507 (40%), Gaps = 77/507 (15%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +SV L+ +K ++E V VRG++S SGH YFSLKD+ + + + +KG Sbjct: 3 IFSVRTLTQAIKDVLEGEFPFVWVRGQVSNL-SRPPSGHVYFSLKDDDATLSVVWFKGAQ 61 Query: 74 -------------------NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 + F +G E LV G++ +P YQ++ E + G G Sbjct: 62 PKGSVDGGERVNPVTGEVESGEPFALCDGQEVLVAGRMNVYPPRGAYQLVAELVQGQGLG 121 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLR 173 L A E K KL +G F K +P P+ +AV+T+P GA ++D L+ R + Sbjct: 122 ELAVAFEAMKAKLAAKGYFDPDRKMVLPRNPRRVAVVTAPQGAALQDFLRIADDRGYGAT 181 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 + ++P VQG+ P +IA A+ + + ++I L RGGGS+EDLW FN E + Sbjct: 182 IRVYPSLVQGESAPAQIAAALDRADRDGWA------EVIALIRGGGSLEDLWAFNTEPVA 235 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 A+ + +P++ +GHE D ++AD AD RA TP+ AA++ + L+ + L Sbjct: 236 EAVFRARLPVVCGVGHEVDTSIADLVADQRAATPSHAAQILWTERGVLRQQADEIFLALT 295 Query: 294 NIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 + RL+ + L + L + + + + L+RL L + + + Sbjct: 296 RGMDRLLDLRERDLQRHAQGLAWHSPARRIERGGFELERLAGRLRQAIRTQVESRAATLV 355 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + +R+ F + R + Q +EQ+ + +R + L L Sbjct: 356 RLEDRMYRSFGPAAMLSLRSELDRAQGALEQVGSRFVRVRLESLRGVEGRLAALDPAAPL 415 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 RGY ++ + Sbjct: 416 A-----------------------------------------------RGYALVRGSAG- 427 Query: 472 FITQKRNLATKTRILINFFDGQANAIV 498 F+ + ++ I + DG+ +A V Sbjct: 428 FVRSREDVQAGDEIRVQVADGEFSAEV 454 >gi|169343533|ref|ZP_02864532.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens C str. JGS1495] gi|169298093|gb|EDS80183.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens C str. JGS1495] Length = 400 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++K +VE++ ++ V+GEIS + HSSGH YFSLKD +S+++ I Sbjct: 1 MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG++ + ++ + YQ+ E++ +G G L K KK+L Sbjct: 60 MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEG+F +++K +P PK I +IT+ TGA +RDI+ I R L +I++P KVQG+ Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D+IIL RGGGSIE+LW FN+ + I NS IP +SA Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RAPTP+ A E+ P + + + L+N + L+ + R Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLVNKKEFLHRAVDRRFLNSKRD 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L K L N + ++ L +L + I + + + +++ ++ Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I++K+ Sbjct: 354 TLGRGYSVIMDKEDK 368 Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ K++ + + V + R++ ++ + + K+ I + L Sbjct: 265 LQEMINDLVNKKEFLHRAVDR--RFLNSKRDVDLLHKGLKGNNPKHIIEKRIKEVNSLEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ F+ KI + ILQ+ NTL RGY+ I D + I + L + Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINKVSELKKNDMV 382 Query: 486 LINFFDGQANAIVI 499 + DG N + Sbjct: 383 KVIMKDGSVNIDIK 396 >gi|319793939|ref|YP_004155579.1| exodeoxyribonuclease vii, large subunit [Variovorax paradoxus EPS] gi|315596402|gb|ADU37468.1| exodeoxyribonuclease VII, large subunit [Variovorax paradoxus EPS] Length = 470 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 119/380 (31%), Positives = 192/380 (50%), Gaps = 9/380 (2%) Query: 6 QKNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + NS P ++V L + +++ + V VRGEISG+ SSGH YFSLKD ++ Sbjct: 33 ETNSAPGPRIWAVGALCRAVADTLDARFNPVSVRGEISGF-SRASSGHCYFSLKDESGQL 91 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +++ ++F P +G + V G++ + Q+++ESL +G G L +RK Sbjct: 92 RCAMFRRAAGLLDFSPRDGDQVEVRGRLAVYEPRGDLQLVVESLRRAGQGALFEQFLQRK 151 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 +L EGLF K +P +P+ + V+TS A + D++ + R P + V++ P VQG Sbjct: 152 ARLEAEGLFDPARKRALPTMPRAVGVVTSLGAAALHDVVTALRRRVPHIPVVLAPAAVQG 211 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 P E+ A+ L TL P D+I+L RGGGSIEDLW FNDE + R I S +P+ Sbjct: 212 ANAPAELVRALQSLYTL-----EPAVDVILLVRGGGSIEDLWAFNDETLARTIVQSPVPV 266 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +S +GHETD+T+AD+ ADLRAPTPT AAE+ ++ +L L RL + + + Sbjct: 267 VSGVGHETDFTIADFCADLRAPTPTAAAELVSAPRDQWLGALDLLNERLGDALGTRLDVL 326 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L ++ + RL + L + R + I + + F Sbjct: 327 GQRLDQAAGRLGRPSNLVARQQLRLAHHAQRLHFAVLSRQERLAQVPRSIAADLPAKF-D 385 Query: 364 HNIQKNRQHILEKQQHIEQI 383 + + R+ + + + Sbjct: 386 RALVQRRERLERVALRLRLL 405 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 43/131 (32%), Gaps = 3/131 (2%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE---QTKNRIFYLHTHIKKLITRIE 428 + Q ++Q + R L ++++ + H + +R L + + + Sbjct: 322 RLDVLGQRLDQAAGRLGRPSNLVARQQLRLAHHAQRLHFAVLSRQERLAQVPRSIAADLP 381 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + + L+ L+RGY + D + + + L ++ Sbjct: 382 AKFDRALVQRRERLERVALRLRLLDPALVLQRGYAWLTDADGRAVVSAKKLHAGDAVVAR 441 Query: 489 FFDGQANAIVI 499 DG+ + V Sbjct: 442 LADGEVDLTVT 452 >gi|116511676|ref|YP_808892.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp. cremoris SK11] gi|116107330|gb|ABJ72470.1| Exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp. cremoris SK11] Length = 422 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 145/351 (41%), Positives = 199/351 (56%), Gaps = 14/351 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK E + L V + GEIS +R + H YF+LKD + I A +W G Sbjct: 10 LSVSTLTKYLKAKFERDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 67 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F EEG++ L IG+I+ +P S Y I IESL+P G G L E+ KKKL EGL Sbjct: 68 FRKLDFELEEGMKVLAIGRISIYPPSGSYSINIESLVPDGVGALALKFEQLKKKLAAEGL 127 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K +P K IAV TSP+GAVIRDI+ + RFP+ +++++P KVQG +EI+ Sbjct: 128 FDQRWKQNLPQFSKKIAVATSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGAGAAEEIS 187 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 188 GNIRRANER------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 241 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P + + E+RL N + LIK + L L Sbjct: 242 DVTLADFVADSRAATPTTAAELATPNTKIDLINWANEQESRLFNRLTHLIKIRRERLEKL 301 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + ++ +LDRL L E + + NR+ Sbjct: 302 SQSVVFRQPERLYDGHVQKLDRLCERLTVLTENKVANMKHRYELSANRLIP 352 >gi|125624489|ref|YP_001032972.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp. cremoris MG1363] gi|158512800|sp|A2RLU4|EX7L_LACLM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|124493297|emb|CAL98266.1| exodeoxyribonuclease VII, large subunit [Lactococcus lactis subsp. cremoris MG1363] gi|300071278|gb|ADJ60678.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp. cremoris NZ9000] Length = 417 Score = 287 bits (735), Expect = 3e-75, Method: Composition-based stats. Identities = 145/351 (41%), Positives = 200/351 (56%), Gaps = 14/351 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK E + L V + GEIS +R + H YF+LKD + I A +W G Sbjct: 5 LSVSTLTKYLKAKFERDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F EEG++ L IG+I+ +P S Y I IESL+P G G L E+ KKKL EGL Sbjct: 63 FRKLDFELEEGMKVLAIGRISIYPPSGSYSINIESLVPDGVGALALKFEQLKKKLAAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K +P K IAV+TSP+GAVIRDI+ + RFP+ +++++P KVQG +EI+ Sbjct: 123 FDQRWKQNLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGAGAAEEIS 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 GNIRRANER------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P + + E+RL N + LIK + L L Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKIDLINWANEQESRLFNRLTHLIKIRRERLEKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + ++ +LDRL L E + + NR+ Sbjct: 297 SQSVVFRQPERLYDGHVQKLDRLCERLTVLTENKVANMKHRYELSANRLIP 347 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 2/140 (1%) Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + L H I+ R+ + + Q + + +Q R ++ + L T+N++ + Sbjct: 280 NRLTHLIKIRRERLEKLSQSV--VFRQPERLYDGHVQKLDRLCERLTVLTENKVANMKHR 337 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + R+ S ++S + L RG++ I D N I ++ Sbjct: 338 YELSANRLIPTYSKIVESKKNKTEQLYQSLLLLDISKIKARGFSLITDENGKIIKSVSDV 397 Query: 480 ATKTRILINFFDGQANAIVI 499 + + DGQ V Sbjct: 398 KKGQALDVELTDGQVKVEVK 417 >gi|303233673|ref|ZP_07320327.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna BVS033A4] gi|302495107|gb|EFL54859.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna BVS033A4] Length = 444 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 134/492 (27%), Positives = 222/492 (45%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV E+S ++++ + + LS+V V GEIS + + SGH YF LKD + I +I+K Sbjct: 3 VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDEKALISCMIFKT 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++G + + G ITT+ GSS YQ++++ SG+G L + K+KL +EG Sbjct: 62 MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEKEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 FS+ K I PK I VITS TGA + DI + I R+P+ ++I+ VQG++ + I Sbjct: 122 YFSELTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAQSI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I ++ D +I+ RGGGS EDL +NDE +++ I N+ PIISA+GHE Sbjct: 182 IEGIKYMDEQ-------NLDTMIVGRGGGSFEDLNSYNDENLLKTIYNAKTPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+ L+D+ ADLRA TPT AAE+A L+ L A++N I+ R + + L Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFGELKIYLQESYAKINRILSRRFEDENQELEYY 294 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 K L + II + + +K + + Sbjct: 295 GKQLEFLGP--------------------KNIIKEHVDNLQKLKENLK--------KAYK 326 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +++++K I + + + + K+ + Sbjct: 327 KNLVDKYNQELNIYH-----------------KLNLLKPDKLLSMEIDKLNKIRITMIKN 369 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L I + L L++GY + ++ I+ ++ I++ Sbjct: 370 LISNISYKELILDSYKNNLLHLNPSAILEKGYAKVL-KDDKNISSVEDVKKNDNIILIMK 428 Query: 491 DGQANAIVINKA 502 DG+ + +V NK Sbjct: 429 DGKLDTLVQNKE 440 >gi|309792224|ref|ZP_07686696.1| exodeoxyribonuclease VII, large subunit [Oscillochloris trichoides DG6] gi|308225765|gb|EFO79521.1| exodeoxyribonuclease VII, large subunit [Oscillochloris trichoides DG6] Length = 401 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 117/357 (32%), Positives = 197/357 (55%), Gaps = 11/357 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 V++L+ +L+ ++E++ + ++ V GEIS +R SGH YF+LKD + + ++W+ Sbjct: 4 LGVAQLNSYLRELLEADEIVRNIWVVGEISEFRRYP-SGHCYFTLKDEGATLRGVMWRTF 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ LP G L GK++ + + Q+++++++P+G G L E+ K++L EGL Sbjct: 63 ADRHPSLPRVGDAVLAHGKVSIYESRGELQLVVDTIMPAGVGLLNARFEELKQRLAAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F+ + K P+P +P+ I ++TSP A ++D+L + RFPL V+I P VQG+ P I Sbjct: 123 FNPERKRPLPDLPRRIGIVTSPQAAALQDMLNILRRRFPLTEVVIAPCLVQGERAPDSIV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ + D+IILARGGGSIEDLW FNDE + RA+ S +P+I+ +GHET Sbjct: 183 EALYAIYQ-------TEVDLIILARGGGSIEDLWCFNDEAVARAVFASPVPLITGVGHET 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T+ D+ ADLRAPTP+ AAE+AVP L + + +RL+ + + Sbjct: 236 DTTIVDFVADLRAPTPSAAAELAVPAMSMLGDQIAYMRSRLHMGVALQPRRAQCERLIQR 295 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + ++ R +LD L R L + H + ++++ + + Sbjct: 296 MNLVAPLRRVAQDRQQLDDLARRLTARMTRSTALHQSHLRGLQAQLRALSPYATLMR 352 Score = 87.9 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 44/127 (34%), Gaps = 3/127 (2%) Query: 385 KQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + H+ ++ + L R+ + L R+ ++ + + Sbjct: 275 RLHMGVALQPRRAQCERLIQRMNLVAPLRRVAQDRQQLDDLARRLTARMTRSTALHQSHL 334 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQANAIVINK 501 L++ + TL RGY ++ + + +T + ++I G +A V+ Sbjct: 335 RGLQAQLRALSPYATLMRGYALVRRASDGHLLTHPDQVLPGDTLIITTRAGDLHAQVVPP 394 Query: 502 APPKEQP 508 +E+ Sbjct: 395 TDQEERR 401 >gi|328948045|ref|YP_004365382.1| exodeoxyribonuclease 7 large subunit [Treponema succinifaciens DSM 2489] gi|328448369|gb|AEB14085.1| Exodeoxyribonuclease 7 large subunit [Treponema succinifaciens DSM 2489] Length = 402 Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats. Identities = 129/357 (36%), Positives = 201/357 (56%), Gaps = 10/357 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +VS+L+ +K ++ES+ ++ ++GEIS Y+ SSGH YFSLKD+ S+I A++++G + Sbjct: 11 LTVSQLTELIKTMLESSFQNIILKGEISNYK-PSSSGHLYFSLKDSDSQISAVMFRGAAS 69 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + F+P++G+ V GKIT + YQI + S+I +G+G ++ +E RK+KL EGLF Sbjct: 70 ALNFIPKDGMLVQVRGKITVYGPRGNYQIQVSSMIEAGAGNIMEMIEMRKRKLAAEGLFD 129 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 K +PF PK + V+TSP GA +RDIL R + VI+FP VQG+ I Sbjct: 130 SARKRTVPFFPKTVGVVTSPNGAALRDILNIRRRRNDKVSVIVFPAIVQGENAADTIEYM 189 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N D++I+ RGGGS+EDL F++E +VRAIA S IP+ISA+GHE DW Sbjct: 190 IKVAN------EYNMCDVLIVGRGGGSLEDLLPFSEEKVVRAIAKSKIPVISAVGHEIDW 243 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NTLNSLL 311 L+D+AAD+RAPTP+ AAE+A+P K ++S++ N ++ L + I Sbjct: 244 ALSDFAADVRAPTPSAAAEIAIPRKSDIESNIENFKSILFSEIQNKTNSLRLMLRNFDPE 303 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 R D+ ++ +E II K + +++ + + Sbjct: 304 NMQTRLQNIEQKYSERFDKAFDSMKDAIENIIKDKRIKIKLCLQNLENCNPQNIFDR 360 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 5/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV-----KQHLRYIFLEKKEK 398 + +++ + + + +IE + + L + Sbjct: 239 HEIDWALSDFAADVRAPTPSAAAEIAIPRKSDIESNIENFKSILFSEIQNKTNSLRLMLR 298 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 ++ + +N K ++ + + IK + + + L++ +N Sbjct: 299 NFDPENMQTRLQNIEQKYSERFDKAFDSMKDAIENIIKDKRIKIKLCLQNLENCNPQNIF 358 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 RGY+ + D N I + L+ +I I +G A V Sbjct: 359 DRGYSMVCDENGKIIRKSSELSNGAKIKIKPAEGLIFATVDKTN 402 >gi|224418363|ref|ZP_03656369.1| exodeoxyribonuclease VII large subunit [Helicobacter canadensis MIT 98-5491] gi|253827682|ref|ZP_04870567.1| exodeoxyribonuclease VII large subunit [Helicobacter canadensis MIT 98-5491] gi|313141893|ref|ZP_07804086.1| exodeoxyribonuclease VII [Helicobacter canadensis MIT 98-5491] gi|253511088|gb|EES89747.1| exodeoxyribonuclease VII large subunit [Helicobacter canadensis MIT 98-5491] gi|313130924|gb|EFR48541.1| exodeoxyribonuclease VII [Helicobacter canadensis MIT 98-5491] Length = 416 Score = 287 bits (734), Expect = 4e-75, Method: Composition-based stats. Identities = 128/489 (26%), Positives = 224/489 (45%), Gaps = 80/489 (16%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ +K ++E+ V V GE+S HSSGH YFSLKD S + ++++G Sbjct: 4 LSVSELNSQIKGLLEATFLQVSVCGEVSNCT-YHSSGHIYFSLKDKDSTLKCVMFRGNAR 62 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++F E+G++ ++ G IT F +YQ+ S IPSG G L A E+ KK+ ++G F Sbjct: 63 YLKFKIEDGMDLILNGGITLFIPRGEYQLNCLSAIPSGVGELTLAYEQLKKEYEKKGYFL 122 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++ +P PK + +ITS +GAV+ D+L+ R+ + I+F VQG+ + IA Sbjct: 123 NKKP--LPKFPKRVGLITSKSGAVLHDMLRVAQKRWNLVEFILFDTLVQGEGAKENIAKN 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I ++L D +ILARGGGS+EDLW FN+ +++ AI + PI+SAIGHE D Sbjct: 181 IQMADSL-------NLDCLILARGGGSLEDLWAFNEPLVIEAIFLAKTPIVSAIGHEPDV 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D+ ADLRAPTP+ A E+ +P K Sbjct: 234 VLSDFVADLRAPTPSAAMEILLPDKIEWLM------------------------------ 263 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 RLD + + +E+ ++ ++ +K + ++ ++ + I+ ++Q + Sbjct: 264 -------------RLDSMQKTMENKIQNLLEKKNKKLEYLEVLLQKNSFFEKIKNHKQQL 310 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 L Q+ + Q +++I ++ +E ++ Sbjct: 311 LTLQKFLTQA-------------------------IESKIIPHRYTLESTPLILEQKITK 345 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + + +++ L+S +N K GY + + + + + Sbjct: 346 ILANKINQIALLKAKLESKNPQNNQKTGYVYA-SFQGKPVLKLSEITPNCLLTLEDLSAS 404 Query: 494 ANAIVINKA 502 V++K Sbjct: 405 VQVQVLDKK 413 >gi|168206124|ref|ZP_02632129.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens E str. JGS1987] gi|170662425|gb|EDT15108.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens E str. JGS1987] Length = 400 Score = 287 bits (734), Expect = 4e-75, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++K +VE++ ++ V+GEIS + HSSGH YFSLKD +S+++ I Sbjct: 1 MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG++ + ++ + YQ+ E++ +G G L K KK+L Sbjct: 60 MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEG+F +++K +P PK I +IT+ TGA +RDI+ I R L +I++P KVQG+ Sbjct: 120 SEEGIFDEKYKRVLPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D+IIL RGGGSIE+LW FN+ + I NS IP +SA Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RAPTP+ A E+ P + + + L+N + L+ + R Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLVNKKEFLHRAVDRRFLNAKKD 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L K L N + ++ L +L + I + + + +++ ++ Sbjct: 294 VDLLHKGLKGNNPTHIIEKRIKEVNTLEEKLNFLGKRKIDKAKDELITLNSILQTLNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I++K+ Sbjct: 354 TLGRGYSVIMDKEDK 368 Score = 93.3 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 2/134 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ K++ + + V + R++ +K + + + I + L Sbjct: 265 LQEMINDLVNKKEFLHRAVDR--RFLNAKKDVDLLHKGLKGNNPTHIIEKRIKEVNTLEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ F+ KI + ILQ+ NTL RGY+ I D + I + L + Sbjct: 323 KLNFLGKRKIDKAKDELITLNSILQTLNPLNTLGRGYSVIMDKEDKVINEVSELKKNDMV 382 Query: 486 LINFFDGQANAIVI 499 + DG N + Sbjct: 383 KVIMKDGSVNIDIK 396 >gi|18310804|ref|NP_562738.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens str. 13] gi|22095663|sp|Q8XJD8|EX7L_CLOPE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|18145485|dbj|BAB81528.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens str. 13] Length = 400 Score = 287 bits (734), Expect = 4e-75, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++K +VE++ ++ V+GEIS + HSSGH YFSLKD +S+++ I Sbjct: 1 MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG++ + ++ + YQ+ E++ +G G L K KK+L Sbjct: 60 MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEG+F +++K +P PK I +IT+ TGA +RDI+ I R L +I++P KVQG+ Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D+IIL RGGGSIE+LW FN+ + I NS IP +SA Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RAPTP+ A E+ P + + + L+N + L+ + R Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAVDRRFLNAKRD 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L K L N + ++ L +L + I + + + +++ ++ Sbjct: 294 VDLLHKGLKGNNPTHIIEKRIKEVNTLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I++K+ Sbjct: 354 TLGRGYSVIMDKEDK 368 Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 2/134 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ +L K++ + + V + R++ ++ + + + I + L Sbjct: 265 LQEMINDLLNKKEFLHRAVDR--RFLNAKRDVDLLHKGLKGNNPTHIIEKRIKEVNTLEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ F+ KI + ILQ+ NTL RGY+ I D + I + L + Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINKVSELKKNDMV 382 Query: 486 LINFFDGQANAIVI 499 + DG N + Sbjct: 383 KVIMKDGSVNIDIK 396 >gi|145219220|ref|YP_001129929.1| exodeoxyribonuclease VII large subunit [Prosthecochloris vibrioformis DSM 265] gi|145205384|gb|ABP36427.1| Exodeoxyribonuclease VII large subunit [Chlorobium phaeovibrioides DSM 265] Length = 402 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 130/362 (35%), Positives = 191/362 (52%), Gaps = 6/362 (1%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SVSEL+ +K +E + V+GEIS ++ HSSGH Y +LKD ++I A+IW Sbjct: 1 MAASILSVSELTQQIKQELEILFPKIQVKGEISNFKH-HSSGHIYMTLKDEGAQIPAVIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K +++ P +G+ + G+I +P S +YQ I S+ G G L A K +KL Sbjct: 60 KHAASRLTCRPADGMNVIAEGRIEVYPPSGRYQFICTSITQEGEGALQQAFAKLLQKLAA 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G FSD+ K PIP IP+ I ++TSPTGAVI D+ + + RFP ++++P KVQG + Sbjct: 120 AGWFSDERKKPIPKIPQTIGLVTSPTGAVIEDMGKVLQRRFPPATILLYPAKVQGRDAVD 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + + I N + RPD+II+ARGGGS+EDL FN+E + AI NS IPIISA+G Sbjct: 180 SLISGISWFNA--QTSGQNRPDVIIVARGGGSLEDLQAFNEERVAEAIFNSPIPIISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD ADLRA TP+ AAE+AVP L + +L A +++ I ++ Sbjct: 238 HETDFTIADMVADLRAGTPSIAAELAVPDSLELLRHITSLGATRESLLKAKIDGAEREID 297 Query: 309 --SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 A + LD + LE + + Sbjct: 298 SLCSSYAFNRPVLQMQQLSEELDSTVERMARTLEGKQRETGMRLEAAARHLGLLDYRKTL 357 Query: 367 QK 368 ++ Sbjct: 358 ER 359 Score = 85.2 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 30/243 (12%), Positives = 81/243 (33%), Gaps = 7/243 (2%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 A + P K + ++ +L + ++ + + + + + + + + R Sbjct: 161 PPATILLYPAKVQGRDAVDSLISGISWFNAQTSGQNRPDVIIVARGGGSLEDLQAFNEER 220 Query: 328 LDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 + + + ++ +++ + LE +HI + Sbjct: 221 VAEAIFNSPIPIISAVGHETDFTIADMVADLRAGTPSIAAELAVPDSLELLRHITSLGAT 280 Query: 387 HLRYIFLE-----KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + + ++ + ++ L + + R+ L K + Sbjct: 281 RESLLKAKIDGAEREIDSLCSSYAFNRPVLQMQQLSEELDSTVERMARTLEGKQRETGMR 340 Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + R L Y+ TL+RGYT ++ + +T +NL + + + F DG A + + Sbjct: 341 LEAAARHLGLLDYRKTLERGYTLVRRK-GHMVTSAKNLRPEETVELLFHDGTLPAEIRSG 399 Query: 502 APP 504 P Sbjct: 400 TPS 402 >gi|225573685|ref|ZP_03782440.1| hypothetical protein RUMHYD_01881 [Blautia hydrogenotrophica DSM 10507] gi|225038978|gb|EEG49224.1| hypothetical protein RUMHYD_01881 [Blautia hydrogenotrophica DSM 10507] Length = 406 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 116/362 (32%), Positives = 187/362 (51%), Gaps = 13/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSV +++ ++K++ + S + V+GE+S + H+SGH YFSLKD I +++ Sbjct: 2 NSIYSVGQVNNYIKNMFTQDFMLSRISVKGEVSNCK-YHTSGHIYFSLKDETGTIACVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F + G + +V G + + KYQ+ + G+G L K++L E Sbjct: 61 AGQRRGLGFAMKNGDKVVVSGSVNVYERDGKYQLYARQIQLEGAGLLYERFLALKRELEE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F+ ++K PIP + + V+T+PTGA I+DI R P L++I++P VQG + Sbjct: 121 MGMFAPEYKQPIPRFIRTLGVVTAPTGAAIQDIRNISYRRNPYLQIILYPALVQGAGAKE 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I L+ L D++I+ RGGGSIEDLW FN+E + RAI + P+ISA+G Sbjct: 181 SIVKGIQTLDRL-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFECTTPVISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+ADY ADLRAPTP+ AAE+AV L E+RL ++ + + L Sbjct: 234 HETDVTIADYVADLRAPTPSAAAELAVDDYRGFLGQLAEYESRLERGLLGRLTLLKSRLE 293 Query: 309 SL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + Q + R L + ++E+ ++ I R+ + + Sbjct: 294 QYKIRMGFLSPRQQILERRQYLADIQEKIENGMKQKIKDSRHELQVYAQRLYGCSPLKKL 353 Query: 367 QK 368 + Sbjct: 354 TQ 355 Score = 94.1 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 52/137 (37%), Gaps = 2/137 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E + +E+ + L + ++ + L + +I ++ + +IE + Sbjct: 269 QLAEYESRLERGLLGRLTLLKSRLEQYKIRMGFL--SPRQQILERRQYLADIQEKIENGM 326 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 KIK + + + L + L +G++ + D N + I + + I I D Sbjct: 327 KQKIKDSRHELQVYAQRLYGCSPLKKLTQGFSFVTDENGHGIHRVEQVKPLDAIRIQVTD 386 Query: 492 GQANAIVINKAPPKEQP 508 G+ A V + + Sbjct: 387 GEIQAQVTGSSLVDREK 403 >gi|326390204|ref|ZP_08211765.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter ethanolicus JW 200] gi|325993852|gb|EGD52283.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter ethanolicus JW 200] Length = 401 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 138/407 (33%), Positives = 225/407 (55%), Gaps = 13/407 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VSE++ ++K +++++ L +V VRGEIS + HS+G YF+LKD + + + Sbjct: 1 MQLKALNVSEITDYIKRMMDNDIILRNVRVRGEISNLK-YHSTG-IYFTLKDEVASLKCV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + F ++G+ + G+IT + S YQ+ ++S+ G G L A K K+KL Sbjct: 59 MFNEYSRLLNFTLQDGMSVIATGRITVYEKSGTYQLYVQSIQSEGIGALYLAFNKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K PIP PK IAV+TSPTGAVIRDI+ R P + +++ PV VQG Sbjct: 119 EKEGLFDSDKKEPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI NA+ LN ++ D+IILARGGGS+E++W FN+E + R I S IP++SA Sbjct: 179 ADEICNALRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T++D+ ADLRAPTP+ AAE+ VP + Q L L+ +L ++ + K Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L + + R++++ L L + + I K F + ++ S + Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + +L+KQ+ + VK Y ++ K + ++ K Sbjct: 353 VLTRGYTIVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVKE 399 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 35/99 (35%) Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + + L ++ L + + + I L S + L RGYT Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + D I+ +++ I I F DG+A AIV Sbjct: 360 IVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVK 398 >gi|291538769|emb|CBL11880.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis XB6B4] Length = 401 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 118/360 (32%), Positives = 198/360 (55%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV +++ ++K++ + + V+GE+S + H+SGH YF++KD ++A+++ G Sbjct: 5 VYSVGQVNTYIKNMFAQDFMLQRISVKGEVSNCK-YHTSGHIYFTIKDAAGTLNAVMFAG 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++F +EG + +V G + + KYQI + G+G L E K++L E G Sbjct: 64 SRKGLKFQMKEGDQVVVTGSVEVYERDGKYQIYAREIELDGAGNLYQKFEALKQELEEMG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 +F+ ++K PIP I V+T+PTGA ++DI + R P ++I++P VQGD + I Sbjct: 124 MFAAEYKQPIPPYAMKIGVVTAPTGAAVQDIRNISARRNPFVQLILYPALVQGDGAVESI 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I L+ L D++I+ RGGGSIEDLW FN+E + RAI P+ISA+GHE Sbjct: 184 VNGIHALDAL-------GVDVVIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAVGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TDWT+AD+ ADLRAPTP+ AAE+AV ++ L ++ R+ + ++ I+ L Sbjct: 237 TDWTIADFVADLRAPTPSAAAELAVFDYAAVEGRLGEIKERMFLLNMQRIQQMRKELEHA 296 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + L R L +L + +E +I + + R++ + + + Sbjct: 297 KDRLSYLSPEGQLREKRKYAADLEEQLRNRMEHMIELRRHKLALLSERLEGVSPVKKLAQ 356 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 2/130 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E ++ + + Q ++ + E + L L + ++ + L ++ + Sbjct: 270 RLGEIKERMFLLNMQRIQQMRKELEHAKDRLSYL--SPEGQLREKRKYAADLEEQLRNRM 327 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 H I+ +++ + L+ + L +GY+ + D N + +T + R+ I Sbjct: 328 EHMIELRRHKLALLSERLEGVSPVKKLAQGYSYVTDENGHALTDAEGVKAGDRVKIRLLK 387 Query: 492 GQANAIVINK 501 G A V Sbjct: 388 GALEAEVTEV 397 >gi|239815625|ref|YP_002944535.1| exodeoxyribonuclease VII large subunit [Variovorax paradoxus S110] gi|239802202|gb|ACS19269.1| exodeoxyribonuclease VII, large subunit [Variovorax paradoxus S110] Length = 436 Score = 287 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 115/384 (29%), Positives = 191/384 (49%), Gaps = 8/384 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN + ++V L + +++ + V VRGEISG+ SSGH YF+LKD+ Sbjct: 1 MNLRDSNPTPGPRIWAVGALCRAVADALDARFNPVAVRGEISGF-SRASSGHCYFALKDS 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++ +++ ++F P +G + V G++ + Q+++ESL +G G L Sbjct: 60 SGQLRCAMFRRAAGLLDFSPRDGDQVEVRGRLAVYEPRGDLQLVVESLQRAGQGALFEQF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 +RK +L EGLF + K +P +P+ + ++TS A + D++ + R P + V++ P Sbjct: 120 LQRKARLEAEGLFDPERKRALPVMPRAVGLVTSLGAAALHDVVTALRRRVPHIPVVLAPA 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG P E+ A+ L L P D+I+L RGGGSIEDLW FNDE + R I S Sbjct: 180 AVQGANAPAELVRALQSLYAL-----EPAVDVILLVRGGGSIEDLWAFNDEALARTIVQS 234 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P+I +GHETD+T+AD+ ADLRAPTPT AAE+ + ++ L+ RL++ + Sbjct: 235 PVPLICGVGHETDFTIADFCADLRAPTPTAAAELVSAPQAMWLGAIDLLDERLDSALGAR 294 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+ L ++ + RL + L + L R + I Sbjct: 295 LDVLGQRLDQAAARLGRPSGLVARQQLRLAHHSQRLRYALLSRAERLAQVPRAIAAD-FP 353 Query: 360 DFLIHNIQKNRQHILEKQQHIEQI 383 L + + R+ + + + Sbjct: 354 LRLERAMAQRRERLERVALRLRLL 377 Score = 97.5 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 5/151 (3%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L + Q + + + + R + + L + + Sbjct: 290 ALGARLDVLGQRLDQAAARLGRPSGLVARQQLRLAHHSQRLRYALLSRAERLAQVPRAIA 349 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 R+E + + L+ L+RGY + D + I + L+ Sbjct: 350 ADFPLRLERAM----AQRRERLERVALRLRLLDPALVLQRGYAWLTDPDGRAIVSAKKLS 405 Query: 481 TKTRILINFFDGQAN-AIVINKAPPKEQPTK 510 ++ DG + A+V K + P Sbjct: 406 PGDAVVARLADGSVDLAVVPGKTGTRPTPGA 436 >gi|307265162|ref|ZP_07546721.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|306919784|gb|EFN49999.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter wiegelii Rt8.B1] Length = 401 Score = 287 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 138/407 (33%), Positives = 225/407 (55%), Gaps = 13/407 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VSE++ ++K +++++ L +V VRGEIS + HS+G YF+LKD + + + Sbjct: 1 MQLKALNVSEITDYIKRMMDNDIILRNVRVRGEISNLK-YHSTG-IYFTLKDEVASLKCV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + F ++G+ + G+IT + S YQ+ ++S+ G G L A K K+KL Sbjct: 59 MFNEYSRLLNFTLQDGMSVIATGRITVYEKSGTYQLYVQSIQSEGIGALYLAFNKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K PIP PK IAV+TSPTGAVIRDI+ R P + +++ PV VQG Sbjct: 119 EKEGLFDSDKKEPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI NA+ LN ++ D+IILARGGGS+E++W FN+E + R I S IP++SA Sbjct: 179 ADEICNALRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T++D+ ADLRAPTP+ AAE+ VP + Q L L+ +L ++ + K Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L + + R++++ L L + + I K F + ++ S + Sbjct: 293 FEGLNRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + +L+KQ+ + VK Y ++ K + ++ K Sbjct: 353 VLTRGYTIVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVKE 399 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 35/99 (35%) Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + + L ++ L + + + I L S + L RGYT Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + D I+ +++ I I F DG+A AIV Sbjct: 360 IVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVK 398 >gi|326406401|gb|ADZ63472.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp. lactis CV56] Length = 417 Score = 287 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 140/351 (39%), Positives = 199/351 (56%), Gaps = 14/351 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + GEIS +R + H YF+LKD + I A +W G Sbjct: 5 LSVSTLTKYLKAKFDRDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F EEG++ L +G+I+ +P S Y I IESL+P G G L E+ KKKL EGL Sbjct: 63 FRKLDFELEEGMKVLAVGRISIYPPSGSYSINIESLVPDGVGALAVKFEQLKKKLTAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K +P K IAV+TSP+GAVIRDI+ + RFP+ +++++P KVQG +EIA Sbjct: 123 FEQRWKQTLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGQGSAEEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 GNIRRANQR------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P + + E RL N + +IK + ++ L Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKVDLINWANEQEKRLFNRLTHVIKIRRERVDKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + ++ +LDRL L E + + ++ Sbjct: 297 SQSVVFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHRYELSAGKLIP 347 Score = 84.8 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 2/140 (1%) Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + L H I+ R+ + + Q + + +Q R ++ + L T+N++ + Sbjct: 280 NRLTHVIKIRRERVDKLSQSV--VFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHR 337 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + ++ +++ + L RG++ + D I ++ Sbjct: 338 YELSAGKLIPTYGKIVEAKKNKTEQLYQSLLLLDISKIKARGFSLVTDEKGKIIKSVSDV 397 Query: 480 ATKTRILINFFDGQANAIVI 499 + + DG+ V Sbjct: 398 KKGQTLDVELTDGKVIVEVK 417 >gi|114566117|ref|YP_753271.1| exodeoxyribonuclease VII [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122318783|sp|Q0AZF4|EX7L_SYNWW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|114337052|gb|ABI67900.1| Exodeoxyribonuclease VII large subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 405 Score = 287 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 131/405 (32%), Positives = 214/405 (52%), Gaps = 13/405 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +V+EL+ ++ ++++S+ L + +RGEISG+R SGH YF+LKD S I A+++K Sbjct: 4 ILTVTELNSYIANLLDSDPFLGQLWLRGEISGFRLYQQSGHMYFTLKDEDSTISAVMFKS 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++F P++G+E L+ ++ F KYQ+ +E + P G G L LE+ KKKL +G Sbjct: 64 RARGLKFKPKDGMEVLLRASVSVFARQGKYQLYVEEMQPYGIGGLFLYLEELKKKLAAKG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 F+ + K IP + + ++TS GA +RDI + + R P + V++ VQG E P E+ Sbjct: 124 YFAPERKKAIPAFVQRVGIVTSQDGAALRDICRILKQRHPGVEVVLAHSSVQGSEAPGEL 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A + LN+ E ++II+ RGGGS EDL FN E++V+AI S+IP+ISA+GHE Sbjct: 184 AEGLRLLNSYAE------VELIIIGRGGGSYEDLMAFNSELVVQAIYESNIPVISAVGHE 237 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLN 308 D+TLAD ADLRA TP+ AA +AV + L L N + RL + R +I Sbjct: 238 VDFTLADLVADLRAATPSQAASLAVADMQALSRQLDNYQQRLLRAMQRKLLYYTEIIDRL 297 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + L L +L + L + I K + + + S + +++ Sbjct: 298 MMKRIWKQPRSLLHMREELLSQLEKSLSRGMAEIFREKKMKLSMNMAALDSLSPLKIMER 357 Query: 369 NRQHILEKQQ--HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + ++ + EQ V+ R + + I + +E+ K Sbjct: 358 GYVLLQKEGRIIRDEQQVQIGDRLEVAMRHADLEIEVIKKERVKR 402 Score = 87.5 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 52/141 (36%), Gaps = 3/141 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q + + QQ + + +++ L Y + + + +Q ++ + + +L Sbjct: 265 MQALSRQLDNYQQRLLRAMQRKLLYYTEIIDRLM--MKRIWKQPRSLLHMREELLSQLEK 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + ++ + +S+ L S + ++RGY +Q I ++ + R+ Sbjct: 323 SLSRGMAEIFREKKMKLSMNMAALDSLSPLKIMERGYVLLQ-KEGRIIRDEQQVQIGDRL 381 Query: 486 LINFFDGQANAIVINKAPPKE 506 + VI K K Sbjct: 382 EVAMRHADLEIEVIKKERVKR 402 >gi|268678922|ref|YP_003303353.1| exodeoxyribonuclease VII large subunit [Sulfurospirillum deleyianum DSM 6946] gi|268616953|gb|ACZ11318.1| exodeoxyribonuclease VII, large subunit [Sulfurospirillum deleyianum DSM 6946] Length = 417 Score = 287 bits (733), Expect = 5e-75, Method: Composition-based stats. Identities = 120/385 (31%), Positives = 192/385 (49%), Gaps = 16/385 (4%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVS L+ +K ++E+ HV V GE+S HSSGH YF+LKD S I +++KG Sbjct: 5 LSVSTLNNQVKSLLEATFLHVSVEGEVS-RPTYHSSGHLYFTLKDADSSISCVMFKGNTK 63 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++F EEG+ +V G I+ F YQI S+ PSGSG L A E+ K KL +G F Sbjct: 64 SLKFQVEEGLSVVVHGSISVFSPRGTYQINCTSMEPSGSGALALAYEQLKAKLGAKGYFE 123 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 K P+P IA++TS TGA ++D+L+ + R+P +++ + VQG+ IA+ Sbjct: 124 AGRKKPLPRFVNHIALVTSGTGAALQDMLRVATKRWPLVKITLIDTLVQGEGAKFAIASN 183 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I + +TL D+II+ RGGGS+EDLW FN+E++ AI P++S++GHE D+ Sbjct: 184 IARADTL-------GVDVIIVGRGGGSVEDLWAFNEEVVADAIFTCKTPVVSSVGHEIDY 236 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD+RAPTP+ A EM +P + L ++ + + + RL+ K Sbjct: 237 VISDFVADMRAPTPSAAMEMILPDSTEMLQRLDSMMEQSHLLFRRLLHSKEEQ------- 289 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + + E H + L+ + + Sbjct: 290 LEQLKRLFAKRSIDEKLALMKGEIAFVERQLNDKMLLMHREKSAQVALLLEQMSFQTKQN 349 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEK 398 L K++ + L +++K Sbjct: 350 LAKKEQLLSSYTLALHSKEPSREQK 374 >gi|169824539|ref|YP_001692150.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC 29328] gi|167831344|dbj|BAG08260.1| exodeoxyribonuclease VII large subunit [Finegoldia magna ATCC 29328] Length = 444 Score = 286 bits (732), Expect = 5e-75, Method: Composition-based stats. Identities = 136/492 (27%), Positives = 225/492 (45%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV E+S ++++ + + LS+V V GEIS + + SGH YF LKD+ + I +I+K Sbjct: 3 VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDDKALISCMIFKT 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++G + + G ITT+ GSS YQ++++ SG+G L + K+KL +EG Sbjct: 62 MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEKEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 FS+ K I PK I VITS TGA + DI + I R+P+ ++I+ VQG++ + I Sbjct: 122 YFSELTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAQSI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I ++ D +I+ RGGGS EDL +NDE +++AI N+ PIISA+GHE Sbjct: 182 IEGIKYMDDQ-------NLDTMIVGRGGGSFEDLNSYNDENLLKAIYNAKTPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+ L+D+ ADLRA TPT AAE+A E L+ L A++N I+ R + + L Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFEELKIYLQESYAKINRILSRRFEDENQELEYY 294 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 K L + II + + +K + + Sbjct: 295 GKQLEFLGP--------------------KNIIKEHVDNLQKLKENLK--------KAYK 326 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +++++K I + + + + K+ + Sbjct: 327 KNLVDKYNQELNIYH-----------------KLNLLKPDKLLSLEIDKLNKVRITMIKN 369 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L I + L L++GY + ++ I+ ++ I++ Sbjct: 370 LISNISYKELILDSYKNNLLHLNPSTILEKGYAKVL-KDDKNISSVDDVKKNDNIILIMK 428 Query: 491 DGQANAIVINKA 502 DG+ + +V NK Sbjct: 429 DGKLDTLVQNKE 440 >gi|291536361|emb|CBL09473.1| exodeoxyribonuclease VII, large subunit [Roseburia intestinalis M50/1] Length = 401 Score = 286 bits (732), Expect = 5e-75, Method: Composition-based stats. Identities = 118/360 (32%), Positives = 198/360 (55%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV +++ ++K++ + + V+GE+S + H+SGH YF++KD ++A+++ G Sbjct: 5 VYSVGQVNTYIKNMFAQDFMLQRISVKGEVSNCK-YHTSGHIYFTIKDAAGTLNAVMFAG 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++F +EG + +V G + + KYQI + G+G L E K++L E G Sbjct: 64 SRKGLKFQMKEGDQVVVTGSVEVYERDGKYQIYAREIELDGAGNLYQKFEALKQELEEMG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 +F+ ++K PIP I V+T+PTGA ++DI + R P ++I++P VQGD + I Sbjct: 124 MFAAEYKQPIPPYAMKIGVVTAPTGAAVQDIRNISARRNPFVQLILYPALVQGDGAVESI 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I L+ L D++I+ RGGGSIEDLW FN+E + RAI P+ISA+GHE Sbjct: 184 VNGIHALDAL-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFECETPVISAVGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TDWT+AD+ ADLRAPTP+ AAE+AV ++ L ++ R+ + ++ I+ L Sbjct: 237 TDWTIADFVADLRAPTPSAAAELAVFDYAAVEGRLGEIKERMFLLNMQRIQQMRKELEHA 296 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + L R L +L + +E +I + + R++ + + + Sbjct: 297 KDRLSYLSPEGQLREKRKYAADLEEQLRNRMEHMIELRRHKLALLSERLEGVSPVKKLAQ 356 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 2/130 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E ++ + + Q ++ + E + L L + ++ + L ++ + Sbjct: 270 RLGEIKERMFLLNMQRIQQMRKELEHAKDRLSYL--SPEGQLREKRKYAADLEEQLRNRM 327 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 H I+ +++ + L+ + L +GY+ + D N + +T + R+ I Sbjct: 328 EHMIELRRHKLALLSERLEGVSPVKKLAQGYSYVTDENGHTLTDAEGVKAGDRVKIRLLK 387 Query: 492 GQANAIVINK 501 G A V Sbjct: 388 GALEAEVTEV 397 >gi|291550247|emb|CBL26509.1| exodeoxyribonuclease VII, large subunit [Ruminococcus torques L2-14] Length = 410 Score = 286 bits (732), Expect = 6e-75, Method: Composition-based stats. Identities = 122/371 (32%), Positives = 200/371 (53%), Gaps = 13/371 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V +++ ++K++ + + + V+GE+S + H+SGH YFSLKD I +++ G Sbjct: 4 VYTVKQVNSYIKNMFTQDFMLNRIYVKGEVSNLK-YHTSGHIYFSLKDESGTIACVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + + F EEG + +V+G ++ + KYQ+ +I G+G L E KK+L E G Sbjct: 63 SRSGLSFHMEEGQQVVVLGAVSVYERDGKYQLYAREIILDGAGLLYERFEALKKELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 +F+ ++K P+P + I V+T+PTGA IRDI+ R P +++++P VQGD I Sbjct: 123 MFAAEYKQPVPRYARTIGVVTAPTGAAIRDIINVAKRRNPFVQILLYPALVQGDGAVSSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L + D++I+ RGGGSIEDLW FN+E + RAI + +P+ISA+GHE Sbjct: 183 VKGIRML-------EEKQVDVMIVGRGGGSIEDLWAFNEEAVARAIFDCRVPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV ++ ++N E+ L I + + + L Sbjct: 236 TDTTIADYVADLRAPTPSAAAELAVYEYSEVKEQILNCESLLRRAINQKLLNERVHLEHS 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + Q L+ R R L +E + ++ R+K + + + Sbjct: 296 RLKLQTLHPRQKLNEKRQRTVDAENTLRSLMERHLTKEKHRLALCAERMKGLSPLEKLSQ 355 Query: 369 NRQHILEKQQH 379 ++ Q Sbjct: 356 GYSYVCNAQGQ 366 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 12/143 (8%), Positives = 48/143 (33%), Gaps = 2/143 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++ IL + + + + + + + + + L + + ++ + Sbjct: 267 KEQILNCESLLRRAI--NQKLLNERVHLEHSRLKLQTLHPRQKLNEKRQRTVDAENTLRS 324 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 ++ + +++ ++ + L +GY+ + + I + + + I Sbjct: 325 LMERHLTKEKHRLALCAERMKGLSPLEKLSQGYSYVCNAQGQNIKKTDQVREGDLLQIYV 384 Query: 490 FDGQANAIVINKAPPKEQPTKKC 512 DGQ V + + + + Sbjct: 385 TDGQIETYVTDTVKLEGERGQSS 407 >gi|167901600|ref|ZP_02488805.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei NCTC 13177] Length = 335 Score = 286 bits (732), Expect = 6e-75, Method: Composition-based stats. Identities = 110/318 (34%), Positives = 177/318 (55%), Gaps = 8/318 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQGALARGLRRGLDARAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDRLP 332 + + L + +L Sbjct: 314 ISPAERLQRQAMHVGQLA 331 >gi|110800889|ref|YP_696505.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens ATCC 13124] gi|168210815|ref|ZP_02636440.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens B str. ATCC 3626] gi|182625649|ref|ZP_02953418.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens D str. JGS1721] gi|123148642|sp|Q0TPD5|EX7L_CLOP1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|110675536|gb|ABG84523.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens ATCC 13124] gi|170711159|gb|EDT23341.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens B str. ATCC 3626] gi|177909051|gb|EDT71526.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens D str. JGS1721] Length = 400 Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 119/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++K +VE++ ++ V+GEIS + HSSGH YFSLKD +S+++ I Sbjct: 1 MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG++ + ++ + YQ+ E++ +G G L K KK+L Sbjct: 60 MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEG+F +++K +P PK I +IT+ TGA +RDI+ I R L +I++P KVQG+ Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D+IIL RGGGSIE+LW FN+ + I NS IP +SA Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWTFNNRDLAYEIFNSRIPTVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RAPTP+ A E+ P + + + L+N + L+ I R Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAIDRKFLNAKKD 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L K L N + ++ L +L + I + + + +++ ++ Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I++K+ Sbjct: 354 TLGRGYSVIMDKKDK 368 Score = 93.7 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ +L K++ + + + + +++ +K + + K+ I + L Sbjct: 265 LQEMINDLLNKKEFLHRAIDR--KFLNAKKDVDLLHKGLKGNNPKHIIEKRIKEVNSLEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ F+ KI + ILQ+ NTL RGY+ I D + I + L + Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKKDKVINEVSELKKNDMV 382 Query: 486 LINFFDGQANAIVI 499 + DG N + Sbjct: 383 KVIMKDGSVNIDIK 396 >gi|307720627|ref|YP_003891767.1| Exodeoxyribonuclease VII large subunit [Sulfurimonas autotrophica DSM 16294] gi|306978720|gb|ADN08755.1| Exodeoxyribonuclease VII large subunit [Sulfurimonas autotrophica DSM 16294] Length = 417 Score = 286 bits (731), Expect = 7e-75, Method: Composition-based stats. Identities = 121/370 (32%), Positives = 199/370 (53%), Gaps = 12/370 (3%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVS L+ +K ++ES V V GE+S H+SGH YF+LKD+ S I A++++G + Sbjct: 4 LSVSALNEQIKTVLESTFERVFVEGELSRITF-HNSGHIYFTLKDSSSAISAVMFRGNAS 62 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K+ F EEG++ ++ G IT + YQI S+ P+G G L A E+ K+KL + F+ Sbjct: 63 KLRFRLEEGMKVIIDGTITLYKPRGSYQINCFSIEPAGQGALALAYEQLKQKLSAQDYFN 122 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K +P P A+ITS TGA ++D+L+ + R+ L + ++ V VQG+ IANA Sbjct: 123 PERKKELPKFPSRTALITSGTGAALQDMLRVANSRYRLLEIDVYDVLVQGEGAAFSIANA 182 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + ++ DII++ RGGGSIEDLW FN+E++ AI ++ P++SA+GHE DW Sbjct: 183 LKIADSR-------EYDIIVIGRGGGSIEDLWAFNEEIVADAIFHAKTPVVSAVGHEIDW 235 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ ADLRAPTP+ A EM +P L L +L +L+ + I L + + Sbjct: 236 VISDFVADLRAPTPSAAMEMILPDTNELYQYLDSLSTQLSQKLHHKIYNLSQELLHVKNS 295 Query: 314 LPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 ++ L + + +L + + + + + + R + I + Sbjct: 296 YIQHSVEKKLQFNLNEIKKLKEDFAQTIAFRLQNYKKDVDSLQQR-FPQTIESIINIAQN 354 Query: 372 HILEKQQHIE 381 +L Q+ +E Sbjct: 355 QLLNLQKMLE 364 >gi|257439491|ref|ZP_05615246.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium prausnitzii A2-165] gi|257198063|gb|EEU96347.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium prausnitzii A2-165] Length = 407 Score = 286 bits (731), Expect = 7e-75, Method: Composition-based stats. Identities = 128/370 (34%), Positives = 199/370 (53%), Gaps = 11/370 (2%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS L+ ++K++++ L + +RGEI+ + SGH YFSL+D + + A++++ Sbjct: 6 SVSALNRYVKNLLDVNDVLFDLALRGEIANFVQNARSGHCYFSLRDEAASVRAVMFRSDA 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PEEG++ +V ++T + +Q+ + + P G G+ A E+ K KL +EGLF Sbjct: 66 RRLGFQPEEGMKVVVRCRVTLYERDGAFQVYVNDMFPDGIGSTQLAFEQLKAKLDKEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + +HK P+P P+ I ++TS TGA ++DI I R+P +R+++ PV VQG E +EIA+ Sbjct: 126 APEHKKPLPRFPQCIGLVTSKTGAALQDIRNVIGRRWPAVRLLLAPVNVQGFEAAEEIAD 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI +L+ D II+ARGGGS EDLW FN E+I RA P+ISAIGHE D Sbjct: 186 AITRLDK------SGLVDEIIVARGGGSREDLWVFNAEVIARAAYRCKTPLISAIGHEID 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+ D+ AD RAPTP+ AAE+AVP + L LE ++N I + N L + Sbjct: 240 FTILDFVADQRAPTPSAAAELAVPDRAEQGRKLCTLEENIHNCIQFKLSLCYNRLEQTEQ 299 Query: 313 ALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + L RLD L L+ + H S + + Sbjct: 300 LLSRAGVQAALEERAARLDTLAGRLQTAARGKLQAGELRLKHTAALAASLNPYGVLARGY 359 Query: 371 QHILEKQQHI 380 + + + I Sbjct: 360 AMVQDNRGRI 369 Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 3/144 (2%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + + +++I ++ L + ++ +L R + + + L R Sbjct: 266 AEQGRKLCTLEENIHNCIQFKLSLCYNRLEQTEQLLS--RAGVQAALEERAARLDTLAGR 323 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ K+++ + T + S L RGY +QD I L Sbjct: 324 LQTAARGKLQAGELRLKHTAALAASLNPYGVLARGYAMVQDNRGR-ICTPDALRPGQTCK 382 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + + + V E K Sbjct: 383 LRGTEHRVTCTVNTVEELDESTQK 406 >gi|167569041|ref|ZP_02361915.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis C6786] Length = 326 Score = 286 bits (731), Expect = 7e-75, Method: Composition-based stats. Identities = 111/311 (35%), Positives = 177/311 (56%), Gaps = 8/311 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG + V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L +S R P + VI++P VQG +++A + Sbjct: 140 ERKRPLPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 EAANARRE------VDVLIVCRGGGSIEDLWSFNDEGLARAIAASEVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELNDRRNALARGLRRGLDLRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSR 325 + + L Sbjct: 314 ISPAERLQRQS 324 >gi|147677517|ref|YP_001211732.1| exonuclease VII, large subunit [Pelotomaculum thermopropionicum SI] gi|146273614|dbj|BAF59363.1| exonuclease VII, large subunit [Pelotomaculum thermopropionicum SI] Length = 399 Score = 286 bits (731), Expect = 7e-75, Method: Composition-based stats. Identities = 131/362 (36%), Positives = 209/362 (57%), Gaps = 13/362 (3%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +SV EL+ ++K ++E + L++V V+GEIS ++ SGH YF+LKD+ S + ++++ Sbjct: 2 KVFSVKELTRYIKSLIEKDVLLANVWVKGEISNFKA-AVSGHFYFTLKDDFSCLKVVMFR 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + F PE G+ V G ++ F YQ+ E + P G+G L A E+ K++L +E Sbjct: 61 SRSRLVPFRPENGMAVTVRGYVSVFERDGIYQLYAEEIEPDGTGALFLAFEQLKERLQQE 120 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKE 189 GLF +HK P+P +P+ I ++TSP GA IRD+L+ I R+ +I+ PV+VQG+ P Sbjct: 121 GLFDPKHKKPLPLLPRRIGIVTSPQGAAIRDMLEIIRRRWNGREIILVPVQVQGEAAPPA 180 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A I LN L D+II+ RGGGSIE+LW FN E++ R+I +S IP+ISA+GH Sbjct: 181 VARGIQLLNRL------GGVDLIIVGRGGGSIEELWAFNTEIVARSIFSSKIPVISAVGH 234 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+T++D+ AD RA TP+ AAEMAVP K ++ + L RL + + + L + Sbjct: 235 ETDFTISDFVADARAATPSAAAEMAVPDKREMERYIQTLRTRLARALEKRLGDDRRRLRA 294 Query: 310 L--LKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L +R + LD L R L + I+ R+ + R+++ + + Sbjct: 295 CLESRVFVRPADVLCGARQQLLDFLYRRLSQAVRGIVEREEGRLAVLAGRLQALSPLATL 354 Query: 367 QK 368 + Sbjct: 355 AR 356 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 32/87 (36%), Gaps = 1/87 (1%) Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FI 473 + L R+ + ++ +++ LQ+ + TL RGY+ + I Sbjct: 311 ARQQLLDFLYRRLSQAVRGIVEREEGRLAVLAGRLQALSPLATLARGYSICTTPDGKRVI 370 Query: 474 TQKRNLATKTRILINFFDGQANAIVIN 500 ++ R+ + GQ + IV Sbjct: 371 NDSGSVEAGERLSVRLHRGQLSCIVEE 397 >gi|15672836|ref|NP_267010.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp. lactis Il1403] gi|14194717|sp|Q9CH84|EX7L_LACLA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|12723782|gb|AAK04952.1|AE006320_1 exonuclease VII large subunit [Lactococcus lactis subsp. lactis Il1403] Length = 417 Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats. Identities = 140/351 (39%), Positives = 199/351 (56%), Gaps = 14/351 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + GEIS +R + H YF+LKD + I A +W G Sbjct: 5 LSVSTLTKYLKAKFDRDRYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F EEG++ L +G+I+ +P S Y I IESL+P G G L E+ KKKL EGL Sbjct: 63 FRKLDFELEEGMKVLAVGRISIYPPSGSYSINIESLVPDGVGALAVKFEQLKKKLTAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K +P K IAV+TSP+GAVIRDI+ + RFP+ +++++P KVQG +EIA Sbjct: 123 FEQRWKQTLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGQGSAEEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 GNIRRANQR------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P + + E RL N + +IK + ++ L Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKVDLINWANEQEKRLFNRLTHVIKIRRERVDKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + ++ +LDRL L E + + ++ Sbjct: 297 SQSVVFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHRYELSAGKLIP 347 Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 2/140 (1%) Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + L H I+ R+ + + Q + + +Q R ++ + L T+N++ + Sbjct: 280 NRLTHVIKIRRERVDKLSQSV--VFRQPERLYDGHLQKLDRLCERLSVLTENKVANMKHR 337 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + ++ +++ + L RG++ + D I ++ Sbjct: 338 YELSAGKLIPTYGKIVEAKKNKTEQLYQSLLLLDISKIKARGFSLVTDEKGKIIKSVSDV 397 Query: 480 ATKTRILINFFDGQANAIVI 499 + + DG+ V Sbjct: 398 KKGQTLDVELTDGKVIVEVK 417 >gi|255284122|ref|ZP_05348677.1| exodeoxyribonuclease VII, large subunit [Bryantella formatexigens DSM 14469] gi|255265296|gb|EET58501.1| exodeoxyribonuclease VII, large subunit [Bryantella formatexigens DSM 14469] Length = 412 Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 193/369 (52%), Gaps = 13/369 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV +++ ++K++ + + + V+GE+S + H+SGH YFSLKD + +++ G Sbjct: 4 VYSVGQVNRYIKNMFQQDFMLKRIYVKGEVSNCK-YHTSGHIYFSLKDETGSMACVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + F ++G + +G I+ + KYQ+ E ++ G+G L E K++L E G Sbjct: 63 SRGGLAFRLQDGQSVIALGSISVYERDGKYQLYAEEILLDGAGLLYEKFEALKRELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ ++K P+P + I ++T+PTGA IRDI R P ++I++P VQG + I Sbjct: 123 MFAPEYKRPVPEFSQKIGIVTAPTGAAIRDIQNIAHRRNPGAQLILYPALVQGKDAAPSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L+ D+II+ RGGGSIEDLW FN+E + AI + P+ISA+GHE Sbjct: 183 VKGIETLDA-------CGVDVIIVGRGGGSIEDLWAFNEESVAYAIFRCNTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+ADY ADLRAPTP+ AAE+AV + + + + +L + + L+ Sbjct: 236 TDFTIADYVADLRAPTPSAAAELAVADISGILAQMERYQRQLARRMTDRLLDARARLSEA 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + R L +L++ + ++ K I R + + +++ Sbjct: 296 SGKLAFLSPQNQIREQRQLLIEKEEKLQYRMANVLENKKHRMLIYIERFRGLSPLDKLKQ 355 Query: 369 NRQHILEKQ 377 + + Sbjct: 356 GYSFVADAH 364 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 52/131 (39%), Gaps = 2/131 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + Q+ + + + R + + A + +N+I + + ++++ + Sbjct: 269 QMERYQRQLARRMTD--RLLDARARLSEASGKLAFLSPQNQIREQRQLLIEKEEKLQYRM 326 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ +++ + I + + + LK+GY+ + D + +T+ + I D Sbjct: 327 ANVLENKKHRMLIYIERFRGLSPLDKLKQGYSFVADAHGKTVTRTEQAQPGDMLTIYVTD 386 Query: 492 GQANAIVINKA 502 G +A V + Sbjct: 387 GCIHAQVKDTE 397 >gi|154483654|ref|ZP_02026102.1| hypothetical protein EUBVEN_01358 [Eubacterium ventriosum ATCC 27560] gi|149735564|gb|EDM51450.1| hypothetical protein EUBVEN_01358 [Eubacterium ventriosum ATCC 27560] Length = 403 Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats. Identities = 117/360 (32%), Positives = 189/360 (52%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V +++ ++K + + +++ ++GE+S + H+SGH YF+LKD I AI++ G Sbjct: 4 IYTVGQVNNYIKRMFNQDFALNNIYIKGEVSNCK-YHTSGHIYFTLKDRTGVISAIMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++F EEG + +V+G ++ + KYQI + +I G+G L E+ K +L E G Sbjct: 63 NRSGLKFKMEEGQKVVVLGSVSVYERDGKYQIYAKEIILEGAGLLYQRFEQLKVELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF +K PIP I + T+ TGA I+DI+ + R P +++ ++P VQG + K+I Sbjct: 123 LFDPMYKKPIPRYATRIGICTAQTGAAIQDIINITTRRNPYVQLYLYPCLVQGADAAKDI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 N I L+++ D II+ RGGGSIEDLW FN++++ AI N + PIISA+GHE Sbjct: 183 VNGIRCLDSM-------NLDTIIVGRGGGSIEDLWAFNEKIVAEAIFNCNTPIISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NTLN 308 TD T+ADY +D RAPTP+ AAE+AV ++ L N L I+ Sbjct: 236 TDTTIADYVSDRRAPTPSAAAELAVFDYMEFENKLQNYRKMLTTYEKHFIEKYKLLTKNL 295 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + L + + L L I+ + R+ ++ I K Sbjct: 296 ENSIQMYSPKNMLLTRKQYISDLQMHLTDCFHTILDSRKHMLQIYAVRLNGLSPLNKISK 355 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 2/134 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIE 428 K Q+ +++ + ++ + K L + KN + +I L + Sbjct: 264 MEFENKLQNYRKMLTTYEKHFIEKYKLLTKNLENSIQMYSPKNMLLTRKQYISDLQMHLT 323 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + S + I L + N + +G+ + + + I L I + Sbjct: 324 DCFHTILDSRKHMLQIYAVRLNGLSPLNKISKGFAYVANDSGESIKTVEQLKKGDNINLT 383 Query: 489 FFDGQANAIVINKA 502 DG+ A V+ Sbjct: 384 ISDGKIKASVLEVQ 397 >gi|281491349|ref|YP_003353329.1| exodeoxyribonuclease VII large subunit [Lactococcus lactis subsp. lactis KF147] gi|281375090|gb|ADA64608.1| Exodeoxyribonuclease VII, large subunit [Lactococcus lactis subsp. lactis KF147] Length = 417 Score = 285 bits (730), Expect = 9e-75, Method: Composition-based stats. Identities = 141/351 (40%), Positives = 199/351 (56%), Gaps = 14/351 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + GEIS +R + H YF+LKD + I A +W G Sbjct: 5 LSVSTLTKYLKAKFDRDPYLERVYLTGEISNFRRRPN--HQYFALKDEGAVIQATMWAGQ 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F EEG++ L +G+I+ +P S Y I IESL+P G G L E+ KKKL EGL Sbjct: 63 FRKLDFELEEGMKVLAVGRISIYPPSGSYSINIESLVPDGVGALAVKFEQLKKKLTAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K +P K IAV+TSP+GAVIRDI+ + RFP+ +++++P KVQG +EIA Sbjct: 123 FEQRWKQTLPQFSKKIAVVTSPSGAVIRDIITTVQRRFPMSQIVLYPTKVQGQGSAEEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + N D++I+ RGGGSIEDLW FN+E++VRAI S IPIIS++GHET Sbjct: 183 GNIRRANQR------GDFDVMIIGRGGGSIEDLWGFNEEIVVRAIFESRIPIISSVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL-INLEARLNNIIIRLIKYKINTLNSL 310 D TLAD+ AD RA TPT AAE+A P + + E RL N + LIK + ++ L Sbjct: 237 DVTLADFVADSRAATPTAAAELATPNTKVDLINWTNEQEKRLFNRLTHLIKIRRERVDKL 296 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + ++ +LDRL L E + + ++ Sbjct: 297 SQSVVFRQPERLYDGHLEKLDRLCERLSVLTENKVANMKHRYELSAGKLIP 347 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 2/140 (1%) Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + L H I+ R+ + + Q + + +Q R ++ + L T+N++ + Sbjct: 280 NRLTHLIKIRRERVDKLSQSV--VFRQPERLYDGHLEKLDRLCERLSVLTENKVANMKHR 337 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + ++ +++ + L RG++ + D I ++ Sbjct: 338 YELSAGKLIPTYGKIVEAKKNKTEQLYQSLLLLDISKIKARGFSLVTDEKGKIIKSVSDV 397 Query: 480 ATKTRILINFFDGQANAIVI 499 + + DG+ V Sbjct: 398 KKGQTLDVELTDGKVIVEVK 417 >gi|189485326|ref|YP_001956267.1| exodeoxyribonuclease VII large subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287285|dbj|BAG13806.1| exodeoxyribonuclease VII large subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 412 Score = 285 bits (730), Expect = 1e-74, Method: Composition-based stats. Identities = 121/358 (33%), Positives = 205/358 (57%), Gaps = 9/358 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 Y+V+++S +K I+E + V +RGEIS ++ + GH YF+++D +++I A++++ T Sbjct: 19 IYTVTQISDEIKLILEDSYPTVWIRGEISNFKLYNF-GHIYFNIRDKNAQIRAVVFRNTG 77 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE+G++ LV G+++++P YQ+I+ + G G L A EK K+KL EG F Sbjct: 78 ISLSFSPEDGMKVLVYGRVSSYPKRGDYQVIVNRIERYGRGELYEAYEKLKEKLKAEGFF 137 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKVQGDECPKEIAN 192 + K PIP I I ++TS GA +RDIL+ I + ++I+PV+VQG E KEI Sbjct: 138 DESAKKPIPDIVSRIGIVTSQDGAALRDILKVIDSLNANVEILIYPVRVQGKEAEKEIPQ 197 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI LN+ D++++ RGGG++EDLW FN E + RAI S IP++S +GHE D Sbjct: 198 AIEYLNSR-----HKDLDVLLVGRGGGAVEDLWAFNTESVARAIFASEIPVVSCVGHEVD 252 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS--L 310 +T+AD+ AD+RAPTP+ AAEM + + ++++ + L L+ I ++ + L+ Sbjct: 253 FTIADFVADMRAPTPSAAAEMVLRSRNYIKTRIELLGESLSRAINFILGDRSAELDRLIS 312 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 +AL LD L L ++ + K + ++ R+ + +++ Sbjct: 313 SRALTKPRLIYEYKISYLDGLGSRLLKSIGRLFESKSENLENVSRRLDIVSPLSVLKR 370 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 2/144 (1%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + ++R +I + + + + + + + +I ++ ++ L R TK R+ Y + Sbjct: 267 PSAAAEMVLRSRNYIKTRIELLGESLSRAINFILGDRSAELDRLISSRALTKPRLIYEYK 326 Query: 419 --HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 ++ L +R+ + +S ++ +R L + + LKRG++ D+NN I Sbjct: 327 ISYLDGLGSRLLKSIGRLFESKSENLENVSRRLDIVSPLSVLKRGFSICFDSNNEIIKDS 386 Query: 477 RNLATKTRILINFFDGQANAIVIN 500 +N+ I I F NA V + Sbjct: 387 KNVNVGDDISIKFASCSLNAQVKS 410 >gi|168214396|ref|ZP_02640021.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens CPE str. F4969] gi|170714112|gb|EDT26294.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens CPE str. F4969] Length = 400 Score = 285 bits (730), Expect = 1e-74, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 203/375 (54%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++K +VE++ ++ V+GEIS + HSSGH YFSLKD +S+++ I Sbjct: 1 MKLKTLSVCEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG++ + ++ + YQ+ E++ +G G L K KK+L Sbjct: 60 MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEG+F +++K +P PK + +IT+ TGA +RDI+ I R L +I++P KVQG+ Sbjct: 120 SEEGIFDEKYKRALPKFPKRVGIITARTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D+IIL RGGGSIE+LW FN+ + I NS IP +SA Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGSIEELWAFNNRDLAYEIFNSRIPTVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RAPTP+ A E+ P + + + L+N + L+ I R Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLKEMINDLVNKKEFLHRAIDRKFLNAKKD 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L K L N + ++ L +L + I + + + +++ ++ Sbjct: 294 VDLLHKGLKGNNPKHIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I++K+ Sbjct: 354 TLGRGYSVIMDKEDK 368 Score = 93.7 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 54/134 (40%), Gaps = 2/134 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ ++ K++ + + + + +++ +K + + K+ I + L Sbjct: 265 LKEMINDLVNKKEFLHRAIDR--KFLNAKKDVDLLHKGLKGNNPKHIIEKRIKEVNSLEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ F+ KI + ILQ+ NTL RGY+ I D + I + L + Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINKVSELKKNDMV 382 Query: 486 LINFFDGQANAIVI 499 + DG N + Sbjct: 383 KVIMKDGSVNIDIK 396 >gi|148379846|ref|YP_001254387.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A str. ATCC 3502] gi|153933902|ref|YP_001384143.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A str. ATCC 19397] gi|153936081|ref|YP_001387684.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A str. Hall] gi|168180473|ref|ZP_02615137.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum NCTC 2916] gi|166232352|sp|A7FUU0|EX7L_CLOB1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|166232353|sp|A5I309|EX7L_CLOBH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|148289330|emb|CAL83426.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum A str. ATCC 3502] gi|152929946|gb|ABS35446.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A str. ATCC 19397] gi|152931995|gb|ABS37494.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A str. Hall] gi|182668793|gb|EDT80771.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum NCTC 2916] Length = 401 Score = 285 bits (730), Expect = 1e-74, Method: Composition-based stats. Identities = 128/376 (34%), Positives = 220/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+I+ + Sbjct: 1 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F PE G++ + +G ++ + YQ+ ++ + G G L A EK K+KL Sbjct: 60 MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF D HK IP K + VITSPTGA ++DI+ R + ++I+P VQG + Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + I LN +++ DIIILARGGGSIE+LW FN+E + A+ NS PII+ Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+AV +E L + ++N + + N + +IK K N Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNYMENIIKEKRNY 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + + +D L L +E + ++ + + + + +++ ++ Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K I ++ ++ Sbjct: 354 VLKKGYTLIEDEGNNL 369 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ ++S + +L++ N Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 LK+GYT I+D NN IT+K L +I I F DG+A + Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKELNKINIIFKDGRAKLSI 395 >gi|159904547|ref|YP_001548209.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis C6] gi|159886040|gb|ABX00977.1| exodeoxyribonuclease VII, large subunit [Methanococcus maripaludis C6] Length = 407 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 127/377 (33%), Positives = 209/377 (55%), Gaps = 12/377 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S +VSEL+ ++K +E + L ++GEIS +H SGH YF+LKD +S ID Sbjct: 8 SAFSNTLTVSELNNYVKSTLEEDYLLKRASIKGEISNCT-LHKSGHVYFTLKDENSAIDG 66 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++K + F P +G+ ++ GK++ + + KYQ S+ G G L EK K+K Sbjct: 67 VMFKTYTKNLNFSPTDGMSVILKGKVSLYTKTGKYQFYCNSMEKDGIGDLFIKFEKLKEK 126 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 L EGLF + +K IP PK I +ITSPTGA I+DI++ R + +II+P VQG+ Sbjct: 127 LENEGLFDETNKQKIPKYPKNIGIITSPTGAAIKDIIKVTRNRNSSVNLIIYPAVVQGES 186 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K + + +LN L + D+II+ARGGGS+EDLW FNDE + RAI S P+++ Sbjct: 187 AAKTVIAGLSELNNL------EKIDLIIIARGGGSMEDLWCFNDESLARAIFESKKPVVT 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D+T++D+ +DLRA TP+ AAE+ V + L+S++ N E L + + I + Sbjct: 241 GIGHEIDFTISDFVSDLRAATPSNAAELTVYKEYELKSTINNFERILKHRMKIEIANRSY 300 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L + + + + ++R+ + H ++ I + + F + + + + Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKLHIERIMTLINHEIKSKISYELKRFEKSYSLLNAYNPL 360 Query: 364 HNIQKNRQHILEKQQHI 380 + + K I ++ + I Sbjct: 361 NVLNKGYSIIQDENEKI 377 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 2/130 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRIEF 429 + + E+I+K ++ + ++ IL+ + + K++I HI++++T I Sbjct: 275 ELKSTINNFERILKHRMKIEIANRSYELDILYSKIEKNSPKSKIEKQKLHIERIMTLINH 334 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + KI + +L ++ N L +GY+ IQD N ++ K + T+ + I Sbjct: 335 EIKSKISYELKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIMSSKNSFKTENNVKITL 394 Query: 490 FDGQANAIVI 499 DG NA +I Sbjct: 395 KDGTVNANII 404 >gi|225570634|ref|ZP_03779657.1| hypothetical protein CLOHYLEM_06734 [Clostridium hylemonae DSM 15053] gi|225160552|gb|EEG73171.1| hypothetical protein CLOHYLEM_06734 [Clostridium hylemonae DSM 15053] Length = 402 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 115/362 (31%), Positives = 194/362 (53%), Gaps = 13/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 Y+V +++ ++K++ + L + V+GE+S + H+SGH YFSLKD I +++ Sbjct: 2 RNVYTVRQVNAYIKNMFTQDYMLGRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F EG + +V+G + + S YQ+ + + G G L + K++L E Sbjct: 61 AGQRGGLSFRMGEGQQVIVMGSVNVYERSGSYQLYAKEIRLDGEGVLYEKFQMLKRELEE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F+ ++K P+P + I ++T+PTGA +RDI+ R P +++I++P +VQG+ + Sbjct: 121 MGMFAPEYKKPLPPYAQRIGIVTAPTGAAVRDIMNIARRRNPYVQLILYPAQVQGEGAKE 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I L D++I+ RGGGSIEDLW FN+E + RAI + S+P+ISA+G Sbjct: 181 SIVRGIQMLERA-------GVDVMIVGRGGGSIEDLWAFNEEEVARAIFDCSVPVISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+ADY ADLRAPTP+ AAE+AV + L L RL+ ++ + ++ + L Sbjct: 234 HETDTTIADYVADLRAPTPSAAAELAVYDIQKLNGELNEAGMRLSRLMRQKLQMERMRLR 293 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + L + RL + L +E + + ++K + + Sbjct: 294 EYETKLKYLHPVNKLREQQQRLVDMEDRLRGLMEGRLTAARHRLAVYVEKMKGLSPVGKL 353 Query: 367 QK 368 + Sbjct: 354 NQ 355 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 55/137 (40%), Gaps = 2/137 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQK + E + ++++Q L+ + +E L L N++ + + Sbjct: 263 IQKLNGELNEAGMRLSRLMRQKLQMERMRLREYETKLKYL--HPVNKLREQQQRLVDMED 320 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ ++ ++ + +++ ++ + L +GY+ +Q + + R++ R+ Sbjct: 321 RLRGLMEGRLTAARHRLAVYVEKMKGLSPVGKLNQGYSYVQGKDGKTVKSIRDVKENDRL 380 Query: 486 LINFFDGQANAIVINKA 502 + DG A V Sbjct: 381 SVYVTDGIVYAAVAGVK 397 >gi|302380353|ref|ZP_07268823.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna ACS-171-V-Col3] gi|302311843|gb|EFK93854.1| exodeoxyribonuclease VII, large subunit [Finegoldia magna ACS-171-V-Col3] Length = 444 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 134/492 (27%), Positives = 222/492 (45%), Gaps = 57/492 (11%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV E+S ++++ + + LS+V V GEIS + + SGH YF LKD + I +I+K Sbjct: 3 VYSVKEISDYIQNTLKKDPILSNVWVEGEISNFN-KNISGHVYFRLKDEKALISCMIFKT 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++G + + G ITT+ GSS YQ++++ SG+G L + K+KL +EG Sbjct: 62 MSLAKTINLKDGDKVQLRGSITTYQGSSTYQLLVKECKKSGTGDLFQKYLELKEKLEKEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 FS+ K I PK I VITS TGA + DI + I R+P+ ++I+ VQG++ + I Sbjct: 122 YFSELTKKSITKYPKSIGVITSSTGAAVNDICRTIKRRYPICDILIYHCVVQGEQSAQSI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I ++ D +I+ RGGGS EDL +NDE +++ I N+ PIISA+GHE Sbjct: 182 IEGIKYMDEQ-------NLDTMIVGRGGGSFEDLNSYNDENLLKTIYNAKTPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+ L+D+ ADLRA TPT AAE+A L+ L A++N I+ R + + L Sbjct: 235 NDFMLSDFVADLRASTPTAAAELATADFGELKIYLQESYAKINRILSRRFEDENQELEYY 294 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 K L + II + + +K + + Sbjct: 295 GKQLEFLGP--------------------KNIIKEHVDNLQKLKENLK--------KAYK 326 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +++++K I + + + + K+ + Sbjct: 327 KNLVDKYNQELNIYH-----------------KLNLLKPDKLLSMEIDKLNKIRITMIKS 369 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L I + L L++GY + ++ I+ ++ I++ Sbjct: 370 LISNISYKELILDSYKNNLLHLNPSTILEKGYAKVL-KDDKNISSVDDVKKNDNIILIMK 428 Query: 491 DGQANAIVINKA 502 DG+ + +V NK Sbjct: 429 DGKLDTLVQNKE 440 >gi|167618142|ref|ZP_02386773.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis Bt4] Length = 347 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 109/316 (34%), Positives = 178/316 (56%), Gaps = 8/316 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG + V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K +P P+ I V+TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGLRRGLDSRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDR 330 + + L + + Sbjct: 314 ISPAERLQRQSMHVGQ 329 >gi|322806135|emb|CBZ03703.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum H04402 065] Length = 401 Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats. Identities = 128/376 (34%), Positives = 220/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+I+ + Sbjct: 1 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F PE G++ + +G ++ + YQ+ ++ + G G L A EK K+KL Sbjct: 60 MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF D HK IP K + VITSPTGA ++DI+ R + ++I+P VQG + Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + I LN +++ DIIILARGGGSIE+LW FN+E + A+ NS PII+ Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+AV +E L + ++N + + N + +IK K N Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRNY 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + + +D L L +E + ++ + + + + +++ ++ Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K I ++ ++ Sbjct: 354 VLKKGYTLIEDEGNNL 369 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ ++S + +L++ N Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 LK+GYT I+D NN IT+K L +I I F DG+A + Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKKLNKINIIFKDGRAKLSI 395 >gi|319763306|ref|YP_004127243.1| exodeoxyribonuclease vii, large subunit [Alicycliphilus denitrificans BC] gi|330825501|ref|YP_004388804.1| exodeoxyribonuclease 7 large subunit [Alicycliphilus denitrificans K601] gi|317117867|gb|ADV00356.1| exodeoxyribonuclease VII, large subunit [Alicycliphilus denitrificans BC] gi|329310873|gb|AEB85288.1| Exodeoxyribonuclease 7 large subunit [Alicycliphilus denitrificans K601] Length = 445 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 125/458 (27%), Positives = 219/458 (47%), Gaps = 30/458 (6%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI 64 + + + V L + +++ + + VRGEI+G+ SSGH YF+LKD +I Sbjct: 4 PPQAGVAPRIWEVGALCRAIADTLQARFNPIAVRGEITGF-SRASSGHCYFTLKDGQGQI 62 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +++ + ++F+P +G V G++ + Q+I+E L +G G L + K Sbjct: 63 RCAMFRRAADLLDFMPRDGELVEVRGRLGVYEARGDLQLIVEGLRRAGQGALFEQFLRLK 122 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 +L EGLF K P+P +P+ I ++TSP A +RD++ ++ R P + V++ P VQG Sbjct: 123 AQLEAEGLFDGARKRPLPVMPRGIGLVTSPGAAALRDVVTALARRVPHIPVVLVPALVQG 182 Query: 184 DECPKEIANAILQLNTLKEG------------RTCPRPDIIILARGGGSIEDLWHFNDEM 231 + P I +A+ +L L + P D+I+L RGGGSIEDLW FNDE Sbjct: 183 AQAPASICDALSKLYLLAQAGSAMEGDPASKTGAPPPIDVILLVRGGGSIEDLWAFNDER 242 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + R I S +P++S +GHETD+T+AD+ ADLRAPTPT AAE+ + +L L R Sbjct: 243 VARTIVQSPVPLVSGVGHETDFTIADFCADLRAPTPTAAAELVSEPRAVWLGALDLLAGR 302 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 L + R I + L+ + L ++ R RL L + + H + + + R + Sbjct: 303 LQDAAQRQIDLRHQRLDQASQRLGRPSGLVAQQRLRLAALAQRMRHGVLLKMQRMAQASQ 362 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + R+ + ++ + +E+ R L + + + L + Sbjct: 363 ALEASLPQGV--------RRSLAQRGERLERAAL---RLELLNPQLVLERGYALLTDAEG 411 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 R ++ R+ + ++ +++ R L Sbjct: 412 R-----AVLRPSQVRLGDAVHARLAEGELDLTVAQRRL 444 >gi|148657279|ref|YP_001277484.1| exodeoxyribonuclease VII large subunit [Roseiflexus sp. RS-1] gi|148569389|gb|ABQ91534.1| Exodeoxyribonuclease VII large subunit [Roseiflexus sp. RS-1] Length = 393 Score = 285 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 120/359 (33%), Positives = 198/359 (55%), Gaps = 13/359 (3%) Query: 15 YSVSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS+L+ +L+ +++++ V V GE+S + H SGH YF+LK+ ++I A++WK Sbjct: 4 LTVSQLNTYLRDLLDADDLLSDVWVEGEVSSFN-RHFSGHCYFTLKEGDAQIGAVMWKSV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ LP G L G++ + + Q+ +++L P+G G L E+ K++L EGL Sbjct: 63 AARMATLPANGDAVLAHGRVAFYEVRGQVQLYVDTLRPAGIGVLQAQFERLKERLAAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F K P+P +P I ++TSPTGA ++D+L + R+PL V+ P +VQG I Sbjct: 123 FDQSRKRPLPPLPHRIGIVTSPTGAALQDMLNILRRRYPLAEVLFAPCQVQGAGAVDTII 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ L E D+II+ARGGG+ EDLW FNDE + RA+ S +P++S +GHET Sbjct: 183 EAL---CALYEAD----VDVIIVARGGGAAEDLWTFNDERLARAVFASPVPVVSGVGHET 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TL D+ AD+RAPTP+ AAEMA P L + L RL+ + + + + ++ L Sbjct: 236 DTTLIDFVADVRAPTPSAAAEMASPDMTELLDDIRQLRNRLDAAVTQRLTTARDGVSHLN 295 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + ++ + R +D L LE I H + + R+++ + + + Sbjct: 296 RRLVLCSPERRIRRDRQHIDDLMHRATITLERRITLARAHLDGVRGRLQALSPLATLDR 354 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 43/127 (33%), Gaps = 2/127 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 I + + ++ V Q L L + + RI HI L+ R L Sbjct: 268 DIRQLRNRLDAAVTQRLTTARDGVSHLNRRL--VLCSPERRIRRDRQHIDDLMHRATITL 325 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 +I + LQ+ + TL RGY +Q T IT +A I + Sbjct: 326 ERRITLARAHLDGVRGRLQALSPLATLDRGYAVVQSTTGALITDASLVAPDDWIEVTVRR 385 Query: 492 GQANAIV 498 G A V Sbjct: 386 GSFRARV 392 >gi|332981366|ref|YP_004462807.1| exodeoxyribonuclease VII, large subunit [Mahella australiensis 50-1 BON] gi|332699044|gb|AEE95985.1| exodeoxyribonuclease VII, large subunit [Mahella australiensis 50-1 BON] Length = 409 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 135/360 (37%), Positives = 218/360 (60%), Gaps = 12/360 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +SVS+L+ ++K + S+ L V VRGEIS Y+ +HSSGH+YF+LKD +S+I ++++ Sbjct: 5 IFSVSQLTAYIKGMFSSDPLLHSVYVRGEISNYK-LHSSGHSYFTLKDQNSKIRCVMFRQ 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 I F ++G++ LV G + + +YQ+ E + P G G+L A E+ K KL ++G Sbjct: 64 YGQPI-FAMQDGMDVLVQGYVNVYDRDGQYQLYAERIEPFGVGSLHLAFEQLKAKLEQDG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF HK P+P PK I V+TS TGA +RDI+ R+P + ++I PV VQG +I Sbjct: 123 LFDRAHKKPLPLFPKRIGVVTSDTGAAVRDIINVAHRRYPNIDLLIVPVAVQGKAAAIQI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + AI LN + E D+II+ RGGGSIE+LW FN+E++ R+I S IP++SA+GHE Sbjct: 183 SEAIDALNVMDES-----VDVIIVGRGGGSIEELWPFNEEIVARSIYRSHIPVVSAVGHE 237 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T++D+ AD+RAPTP+ AAE+ VP+K L+ + L + L++ + L L Sbjct: 238 TDFTISDFVADMRAPTPSAAAELVVPLKTELEQRIAGLCLNAKRAVDMLVEEQRRCLYKL 297 Query: 311 L--KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + Q L + +LD+ R L N+ + K +N + +R+++ + +++ Sbjct: 298 QGSRIMRDPMQLLKDKQQQLDQAERYLLINMHHRMEIKGALYNDLKHRLEAFNPLGALKR 357 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 6/144 (4%) Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----EQTKNRIFYLHTHIKKLITRIE 428 E +Q I + R + + +E+ L+ L+ + + + + Sbjct: 266 TELEQRIAGLCLNAKRAVDMLVEEQRRCLYKLQGSRIMRDPMQLLKDKQQQLDQAERYLL 325 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILI 487 + H+++ + L++F LKRGYT D + + I L+ RI I Sbjct: 326 INMHHRMEIKGALYNDLKHRLEAFNPLGALKRGYTMTLDVEDKSLIKSVSELSLGQRIHI 385 Query: 488 NFFDGQANAIVINKAPPKEQPTKK 511 + DG+A A +++ +E ++ Sbjct: 386 IYDDGRAQAEIVDLEVERENDDRR 409 >gi|193215381|ref|YP_001996580.1| exodeoxyribonuclease VII large subunit [Chloroherpeton thalassium ATCC 35110] gi|193088858|gb|ACF14133.1| exodeoxyribonuclease VII, large subunit [Chloroherpeton thalassium ATCC 35110] Length = 400 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 131/352 (37%), Positives = 205/352 (58%), Gaps = 7/352 (1%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + Y+VS L+ ++ +E +RGEIS ++ HSSGH YF+LKD+ ++I IIW Sbjct: 1 MTAKTYTVSALTDAIRASLEQTFPDFSLRGEISNFK-RHSSGHIYFTLKDSGAQIPVIIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + K+ F ++G+E +V G++ +P S +YQ+I ++ P G G L A + + L + Sbjct: 60 RSLAQKLRFEMQDGLEIVVEGRLEVYPPSGRYQVICTNVSPVGEGILQQAFARLMQTLAK 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +GLF D HK +P +P++I V+TSPTGAVI+DI ++ R+P ++ +FPV+VQG+E Sbjct: 120 DGLFDDAHKKDLPRLPELIGVVTSPTGAVIQDIQTVLARRYPAAQLTLFPVRVQGEEAMA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI AI N RPD++I+ RGGGS+EDLW FN+E + RAI S IPIISA+G Sbjct: 180 EIVAAISYFNR---QTGKNRPDVLIVGRGGGSLEDLWAFNEESVARAIFASGIPIISAVG 236 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINT 306 HETD T+AD AD+RA TP+ AAE+A P + +Q+S+ ++ I I+ Y+ Sbjct: 237 HETDITIADLVADVRAATPSMAAELAAPSHDEIQASIDGALQQMAFSIASKIEGNYRQVN 296 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 A +T+ R +++ +++E L + F ++ Sbjct: 297 SILGSYAFNRPVRTIENKRQQVENQIQQMERGLVQKWMQADARFKLAEGKLY 348 Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 6/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF-----LEKKEK 398 ++ +++ + E Q I+ ++Q I ++ Sbjct: 237 HETDITIADLVADVRAATPSMAAELAAPSHDEIQASIDGALQQMAFSIASKIEGNYRQVN 296 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + I ++ I ++E L K + L ++N L Sbjct: 297 SILGSYAFNRPVRTIENKRQQVENQIQQMERGLVQKWMQADARFKLAEGKLYLLGHENIL 356 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 KRGY + + I Q +L+ + F DG+ V + Sbjct: 357 KRGYALVL-KDGKPIRQASSLSAGDLAKLKFQDGEKTVRVEDDE 399 >gi|121594644|ref|YP_986540.1| exodeoxyribonuclease VII large subunit [Acidovorax sp. JS42] gi|120606724|gb|ABM42464.1| Exodeoxyribonuclease VII large subunit [Acidovorax sp. JS42] Length = 445 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 127/449 (28%), Positives = 211/449 (46%), Gaps = 30/449 (6%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + V L + +E+ + V VRGEI+G+ SSGH YF+LKD + +I +++ Sbjct: 13 IWEVGALCRAIADALEARFNPVAVRGEITGF-SRASSGHCYFTLKDGNGQIRCAMFRRAA 71 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F P +G V G++ + Q+I++SL +G G L + K +L EGLF Sbjct: 72 GVLDFTPRDGELVEVRGRLGVYEARGDLQLIVDSLQRAGQGALFEQFMRLKAQLEAEGLF 131 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P +P+ I V+TSP A + D++ + R P + V++ P VQG + P IA Sbjct: 132 DAARKRALPAMPRGIGVVTSPGAAALHDVVTALRRRVPHIPVVLVPALVQGAQAPASIAE 191 Query: 193 AILQLNTL------------KEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 A+ ++ L P D+I+L RGGGSIEDLW FNDE + RAI S Sbjct: 192 ALSKMYLLAQEGRALDGDLAMNAGAPPAIDVILLVRGGGSIEDLWAFNDERVARAIVQSP 251 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P++S +GHETD+T+AD+ ADLRAPTPT AAE+ + +L L RL + + R + Sbjct: 252 VPLVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPRAVWLGALDLLAQRLADGVQRQV 311 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ + L + + RL L + L H L + R + + Sbjct: 312 DLRHQRLDQAAQRLGRPSGFVGRQQLRLSGLEQRLRHGLLLKTQRLAHAGQALQSHFPQI 371 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ + R+ + ++ + L + A+L + Q R Sbjct: 372 V-QRSLVQRRERLERAALRLQLLDP------RLVLQRGYALLTDAQGQPVTR-------- 416 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449 R+ + ++ ++++ R L Sbjct: 417 -PAQVRLGDAVHAQLAEGELDLTVSQRRL 444 >gi|153853042|ref|ZP_01994451.1| hypothetical protein DORLON_00436 [Dorea longicatena DSM 13814] gi|149753828|gb|EDM63759.1| hypothetical protein DORLON_00436 [Dorea longicatena DSM 13814] Length = 404 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 192/364 (52%), Gaps = 13/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + Y+V +++ ++K++ + + + V+GE+S + H+SGH YFSLKD I + Sbjct: 1 MARNVYTVKQVNSYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F EG + +V+G + + + YQ+ + + G GTL + K++L Sbjct: 60 MFAGQRGGLSFHMREGQQIIVLGSVNVYERTGSYQLYAQEIRLDGEGTLYEKYQMLKQEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 E G+F+ ++K IP K I V+T+PTGA +RDI+ + R P ++++++P +VQG+ Sbjct: 120 EEMGMFAPEYKKAIPRYAKRIGVVTAPTGAAVRDIMNISARRNPYVQLLLYPAQVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I I L D+II+ RGGGSIEDLW FNDE + RAI + +P+ISA Sbjct: 180 KESIVRGIRML-------ETKNVDVIIVGRGGGSIEDLWAFNDECVARAIFDCQVPVISA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+ADY ADLRAPTP+ AAE+AV LQ L R+N + I+ Sbjct: 233 VGHETDVTIADYVADLRAPTPSAAAELAVWDYRQLQGYLDECRLRMNRSMTGTIRINRLR 292 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L + RL L EL + + I ++ + Sbjct: 293 LKELDVRLSYLHPRHKLQDQQQRLIELEEELRTLMRDRVKEARHRLAIQIEKLNGLSPVR 352 Query: 365 NIQK 368 + + Sbjct: 353 KLNQ 356 Score = 97.9 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 51/139 (36%), Gaps = 2/139 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ + ++ E + + + + +R L KE L L ++++ + +L Sbjct: 265 RQLQGYLDECRLRMNRSMTGTIRINRLRLKELDVRLSYL--HPRHKLQDQQQRLIELEEE 322 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ ++K ++I L + L +G+ +++ + + R + + Sbjct: 323 LRTLMRDRVKEARHRLAIQIEKLNGLSPVRKLNQGFAYVEEADGGVVKSIRQVEKGDELT 382 Query: 487 INFFDGQANAIVINKAPPK 505 + DG V Sbjct: 383 VYVTDGLIRTSVKAVQKKT 401 >gi|218132226|ref|ZP_03461030.1| hypothetical protein BACPEC_00083 [Bacteroides pectinophilus ATCC 43243] gi|217992885|gb|EEC58885.1| hypothetical protein BACPEC_00083 [Bacteroides pectinophilus ATCC 43243] Length = 404 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 116/358 (32%), Positives = 198/358 (55%), Gaps = 13/358 (3%) Query: 15 YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 Y+V +++ ++K++ + + V VRGEIS + H+SGH YF+LKD I A+++ G Sbjct: 4 YTVGQINLYIKNMFRQDFVLNKVIVRGEISNCK-YHTSGHIYFTLKDETGTIAAVLFAGN 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F E G++ V G+I + +YQ+ + S+ +G G L E+ K +L E G+ Sbjct: 63 AKNVGFRLENGMKVNVSGRIDIYERDGRYQLYVNSVEAAGMGDLYRRFEQLKAELEEMGM 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F+ ++K PIP + I ++T+ TGA I+DI+ R P +++I++P VQGDE I Sbjct: 123 FAQEYKKPIPAFARKIGIVTASTGAAIQDIINISRRRNPYVQLILYPATVQGDEAKYSIV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I +L+++ D+II RGGGSIEDLW FN+E + RAI +++ PIISA+GHET Sbjct: 183 KGIRRLDSM-------GLDVIIAGRGGGSIEDLWAFNEECVARAIFDAATPIISAVGHET 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+ AD+RAPTP+ AAE+AV ++ ++ + LN+ + ++ L Sbjct: 236 DFTIADFVADMRAPTPSAAAELAVADITGIEGAIEQYRSGLNSAMNYKLERMRMMLEQRA 295 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + + L+ +R L ++ ++ K ++ + ++ Sbjct: 296 AKLKYLSPESKLNENRQITADYEDRLNRAIKSVVTLKRHELAIKAEKLHGLSPLTALK 353 Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 47/134 (35%), Gaps = 2/134 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 I + + + + L + + +++ A L L ++++ R+ + Sbjct: 269 IEQYRSGLNSAMNYKLERMRMMLEQRAAKLKYL--SPESKLNENRQITADYEDRLNRAIK 326 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + ++I L + LK GY ++D + +++ I +N DG Sbjct: 327 SVVTLKRHELAIKAEKLHGLSPLTALKGGYAYVEDDVGRPVRSIGDVSPGNNIRVNVTDG 386 Query: 493 QANAIVINKAPPKE 506 +A V + Sbjct: 387 IISACVTEVSAADS 400 >gi|167561818|ref|ZP_02354734.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis EO147] Length = 342 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 110/316 (34%), Positives = 178/316 (56%), Gaps = 8/316 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG + V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L +S R P + VI++P VQG +++A + Sbjct: 140 ERKRPLPTHPRAIGIVTSLQAAALRDVLTTLSRRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S + ++ +GHETD+T Sbjct: 200 EAANARRE------VDVLIVCRGGGSIEDLWSFNDEGLARAIAASEVHVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD+AAD+RAPTPTGAAE+ P + L L + L + R + + L+ L + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELNDRRNALARGLRRGLDLRAQQLDWLARRL 313 Query: 315 PNSDQTLSCSRYRLDR 330 + + L + + Sbjct: 314 ISPAERLQRQSTHVGQ 329 >gi|153814702|ref|ZP_01967370.1| hypothetical protein RUMTOR_00917 [Ruminococcus torques ATCC 27756] gi|317500232|ref|ZP_07958462.1| exodeoxyribonuclease 7 large subunit [Lachnospiraceae bacterium 8_1_57FAA] gi|331087538|ref|ZP_08336470.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 3_1_46FAA] gi|145847733|gb|EDK24651.1| hypothetical protein RUMTOR_00917 [Ruminococcus torques ATCC 27756] gi|316898358|gb|EFV20399.1| exodeoxyribonuclease 7 large subunit [Lachnospiraceae bacterium 8_1_57FAA] gi|330401756|gb|EGG81334.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 3_1_46FAA] Length = 402 Score = 285 bits (728), Expect = 2e-74, Method: Composition-based stats. Identities = 117/406 (28%), Positives = 194/406 (47%), Gaps = 13/406 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V +++ ++K++ + + + V+GEIS + H SGH YFSLKD I +++ G Sbjct: 4 IYTVKQVNSYIKNMFTQDFMLNRIYVKGEISNCK-YHPSGHIYFSLKDESGTIACVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + F + G + G ++ + KYQ+ + G+G L E K++L E G Sbjct: 63 SRAGLSFTLKNGQRVIAFGSVSVYERDGKYQLYAREIKLDGAGELYEKFEALKRELCEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +FSD++K IP K + ++T+ GA +RDI+ R P +++I++P VQG+ K I Sbjct: 123 MFSDEYKQRIPAYVKTVGIVTAQNGAAVRDIINVAKRRNPYVQLILYPALVQGEGAVKSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L D++I+ RGGGSIE+LW FN+E + RAI S+P+ISA+GHE Sbjct: 183 IRGIRML-------EQQGVDVMIVGRGGGSIEELWAFNEEEVARAIFECSVPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+AD+ ADLRAPTP+ AAE+AV + ++ E R+ + I Sbjct: 236 TDVTIADFVADLRAPTPSAAAELAVYEIRECKKTMSAYEDRIVRAALSQIGLFRTKAERF 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + L R + + +E + ++ R+K + + Sbjct: 296 SMRLKLLHPRHKLYEHRQFTAEMENRIRDIMERRLTQEKHRLALNAERMKRVSPLLKLSS 355 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 +I ++ + Q R LE + T+ I Sbjct: 356 GYSYIRSEEGKNIRSTAQVKRGEKLEIFVSDGKIEAEVHNTETMIH 401 Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 51/138 (36%), Gaps = 2/138 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I++ ++ + + I + + + + L +L +++++ ++ Sbjct: 263 IRECKKTMSAYEDRIVRAALSQIGLFRTKAERFSMRLKLL--HPRHKLYEHRQFTAEMEN 320 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 RI I+ ++ +++ ++ + L GY+ I+ I + ++ Sbjct: 321 RIRDIMERRLTQEKHRLALNAERMKRVSPLLKLSSGYSYIRSEEGKNIRSTAQVKRGEKL 380 Query: 486 LINFFDGQANAIVINKAP 503 I DG+ A V N Sbjct: 381 EIFVSDGKIEAEVHNTET 398 >gi|325290007|ref|YP_004266188.1| Exodeoxyribonuclease VII large subunit [Syntrophobotulus glycolicus DSM 8271] gi|324965408|gb|ADY56187.1| Exodeoxyribonuclease VII large subunit [Syntrophobotulus glycolicus DSM 8271] Length = 401 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 128/388 (32%), Positives = 207/388 (53%), Gaps = 11/388 (2%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SV+EL+ + ++ + L + V+GEIS ++ SGH YFS+KD + A++++ Sbjct: 4 VLSVTELNNEISSVLRRDYLLQNCWVKGEISNFKRHSPSGHCYFSVKDEKCSLRAVMFRT 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + F PE G+ ++ G + + QI +E ++PSG G + A E+ K+KL EG Sbjct: 64 AASLLTFSPENGLSVMLRGNVRFYEKDGNIQIYVEEILPSGLGAMYLAFEQLKRKLEAEG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 F+ K IP P IA++TS TGA IRD++ R P + +++ P VQG+ P EI Sbjct: 124 FFAASRKRAIPKYPARIAIVTSATGAAIRDMMNVTKRRNPYIALLLAPATVQGETAPLEI 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI ++N + D+II+ RGGGS+E+LW FN E++ RAI NS IP+ISA+GHE Sbjct: 184 AQAIGRINQHGDS------DVIIVGRGGGSLEELWAFNTEIVARAIFNSKIPVISAVGHE 237 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+T+AD+ AD+RAPTP+ AAE+AVP+ E ++ SL + +L + R ++ K L L Sbjct: 238 VDFTIADFVADMRAPTPSAAAELAVPLYEEMKKSLALNQDKLEKLFGRQLETKRTRLREL 297 Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L ++ R LD L+ + + K R+ + + + Sbjct: 298 KSEAVLAQPFWRMNNLRQDLDMRTERLQKGITGFLSEKNDILKFTGQRLNLLSPLAVLSR 357 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + Q + + ++Q L + Sbjct: 358 GYAIAQDDQGGLVKSIEQISAAKELFVR 385 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 2/136 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ ++ + Q +E++ + L +E + + Q R+ L + R Sbjct: 266 EEMKKSLALNQDKLEKLFGRQLETKRTRLRELKSEA--VLAQPFWRMNNLRQDLDMRTER 323 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ ++ + + + T + L + L RGY QD + ++ + Sbjct: 324 LQKGITGFLSEKNDILKFTGQRLNLLSPLAVLSRGYAIAQDDQGGLVKSIEQISAAKELF 383 Query: 487 INFFDGQANAIVINKA 502 + DG A V Sbjct: 384 VRLIDGIAECEVKKIQ 399 >gi|268316914|ref|YP_003290633.1| exodeoxyribonuclease VII, large subunit [Rhodothermus marinus DSM 4252] gi|262334448|gb|ACY48245.1| exodeoxyribonuclease VII, large subunit [Rhodothermus marinus DSM 4252] Length = 406 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 130/391 (33%), Positives = 209/391 (53%), Gaps = 7/391 (1%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M P + + V EL+ L VES + V GE+S +R SGH YF+L+D Sbjct: 1 MQPLFDS-IFEPRVWRVGELAKALCETVESLYDELIVEGELSNFRRHRQSGHCYFTLQDG 59 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++W + ++ F PE+G + V G++T + + Q+I S+ +G+G A Sbjct: 60 EAQLRCVMWASRVQRLYFRPEDGHQVQVHGRLTFYKPRGELQLIATSMTLAGAGARQQAF 119 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E K++L EGLF K P+P P+ I V+TS +GA ++DIL + RFP + V+ PV Sbjct: 120 EALKRRLEAEGLFDPDRKRPLPRFPRRIGVVTSDSGAALQDILSILRRRFPVVEVLHCPV 179 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + IA AI +N L E R RPD++I+ RGGGS+EDLW FN+E++ RAI S Sbjct: 180 HVQGLQAAPSIARAIRLMNRLPEDR---RPDVLIVGRGGGSVEDLWAFNEEVVARAIFAS 236 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ISA+GHETD ++AD AD RA TP+ AAE+AVP ++ L++ LI + + + Sbjct: 237 HIPVISAVGHETDVSIADLVADRRAATPSMAAEIAVPDRDELETMLIRTVQVMRQYLRQG 296 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + ++ LL L L + L RL L+ + ++ R+ + + +R+ Sbjct: 297 LDRRRQRVHMLLHHYGLRRVPDRLDLLKTELQRLEAALQQQVRQLLERRRQTLTLLQSRL 356 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + +Q+ + + + Sbjct: 357 NAFDPQLPLQRGYVRVRCNGSLATRAHQLQP 387 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 64/133 (48%), Gaps = 3/133 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427 R + Q+++Q+LR +++++ +L H + +R+ L T +++L + Sbjct: 275 RDELETMLIRTVQVMRQYLRQGLDRRRQRVHMLLHHYGLRRVPDRLDLLKTELQRLEAAL 334 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + ++ ++++ L +F + L+RGY ++ N + T+ L + + Sbjct: 335 QQQVRQLLERRRQTLTLLQSRLNAFDPQLPLQRGYVRVR-CNGSLATRAHQLQPGDAVTL 393 Query: 488 NFFDGQANAIVIN 500 F+DG+ +A + + Sbjct: 394 EFYDGRRDARITS 406 >gi|222110754|ref|YP_002553018.1| exodeoxyribonuclease vii large subunit [Acidovorax ebreus TPSY] gi|221730198|gb|ACM33018.1| exodeoxyribonuclease VII, large subunit [Acidovorax ebreus TPSY] Length = 445 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 127/449 (28%), Positives = 212/449 (47%), Gaps = 30/449 (6%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + V L + +E+ + V VRGEI+G+ SSGH YF+LKD + +I +++ Sbjct: 13 IWEVGALCRAIADALEARFNPVAVRGEITGF-SRASSGHCYFTLKDGNGQIRCAMFRRAA 71 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F P +G V G++ + Q+I++SL +G G L + K +L EGLF Sbjct: 72 GVLDFTPRDGELVEVRGRLGVYEARGDLQLIVDSLQRAGQGALFEQFMRLKAQLEAEGLF 131 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P +P+ I V+TSP A + D++ + R P + V++ P VQG + P IA Sbjct: 132 DAARKRALPAMPRGIGVVTSPGAAALHDVVTALRRRVPHIPVVLVPALVQGAQAPASIAE 191 Query: 193 AILQLNTLKE------------GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 A+ ++ L + P D+I+L RGGGSIEDLW FNDE + RAI S Sbjct: 192 ALSKMYLLAQAGRALDGDLTLNAGASPAIDVILLVRGGGSIEDLWAFNDERVARAIVQSP 251 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P++S +GHETD+T+AD+ ADLRAPTPT AAE+ + +L L RL + + R + Sbjct: 252 VPLVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPRAVWLGALDLLAQRLADGVQRQL 311 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ + L + + RL L + L H L + R + + Sbjct: 312 DLRHQRLDQAAQRLGRPSGFVGRQQLRLSGLEQRLRHGLLLKTQRLTHAGQALQSHFPQI 371 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ + R+ + ++ + L + A+L + Q R Sbjct: 372 V-QRSLVQRRERLERAALRLQLLDP------RLVLQRGYALLTDAQGQPVTR-------- 416 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449 R+ + ++ ++++ R L Sbjct: 417 -PAQVRLGDAVHAQLAEGELDLTVSQRRL 444 >gi|327469007|gb|EGF14479.1| exodeoxyribonuclease VII large subunit [Streptococcus sanguinis SK330] Length = 446 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 154/500 (30%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H +FSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQHFSLKDEKTVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + + Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYQPNGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQALPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++A+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QVADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+ AD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFVADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ + Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEQQRVKILQHRLEALNPLSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N + + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVVESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|284048212|ref|YP_003398551.1| exodeoxyribonuclease VII, large subunit [Acidaminococcus fermentans DSM 20731] gi|283952433|gb|ADB47236.1| exodeoxyribonuclease VII, large subunit [Acidaminococcus fermentans DSM 20731] Length = 404 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 130/389 (33%), Positives = 212/389 (54%), Gaps = 12/389 (3%) Query: 13 PEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 Y+VSE++ +K + E +++ ++GE+S +R SGH YF+LKD + + A+++ Sbjct: 5 KIYTVSEVTRIVKGLFRKEPEFANLQIQGEVSNFRQYP-SGHCYFNLKDGKTLLKAVMFA 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G +++ LP+ G + L +G+I + YQ ++ ++P G+G L+ A E+ K+KL E Sbjct: 64 GAARRLKQLPKNGDQVLGVGRIDLYERDGVYQFYVDMMMPLGAGNLMIAYEQLKEKLTAE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF K P+P PK++ ++TSP GA +RDI+ R P +++ ++PVKVQG E P E Sbjct: 124 GLFDPGRKRPLPAYPKVVGIVTSPAGAAVRDIINVAGRRDPSVKLRLYPVKVQGTEAPPE 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I +N D++I+ RGGGS+EDLW FNDE +VRAIA S IP+ISA+GH Sbjct: 184 IIRGIRFMNR------HKLADVLIVGRGGGSMEDLWAFNDEGVVRAIAASEIPVISAVGH 237 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+TL+D+AADLRAPTP+ AAE+AVP + + L L RL + ++ L Sbjct: 238 EIDFTLSDFAADLRAPTPSAAAELAVPERSGDREILAKLVRRLERTMELRLQDSSRALEK 297 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + + ++ + LD L R LE + + + + + ++ + ++ Sbjct: 298 LQEEWVFTHPERLWENAGQTLDTLCRNLEQAGTRRLEERQQKLDLLAAKLGALDPYGVLR 357 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + Q + L + Sbjct: 358 RGYTITENAQGRAVRQPSDLHPGDTLVTR 386 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 46/137 (33%), Gaps = 2/137 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R+ + + + +E+ ++ R + + + + + L +E Sbjct: 270 REILAKLVRRLERTMEL--RLQDSSRALEKLQEEWVFTHPERLWENAGQTLDTLCRNLEQ 327 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + +++ + + L + L+RGYT ++ + Q +L ++ F Sbjct: 328 AGTRRLEERQQKLDLLAAKLGALDPYGVLRRGYTITENAQGRAVRQPSDLHPGDTLVTRF 387 Query: 490 FDGQANAIVINKAPPKE 506 G + V E Sbjct: 388 AQGAVVSQVETVKEGTE 404 >gi|188587903|ref|YP_001921550.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum E3 str. Alaska E43] gi|226694642|sp|B2V4R6|EX7L_CLOBA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|188498184|gb|ACD51320.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum E3 str. Alaska E43] Length = 399 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 126/376 (33%), Positives = 217/376 (57%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K +++++ +++ V+GEIS + HSSGH YFSLKDN+S+++ + Sbjct: 1 MKIKTLTVSDLTNYIKKVIDNDFILNNLSVKGEISNLKF-HSSGHIYFSLKDNNSKVNCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K + + E+G+E +V G+ + + + +Q+ + + G G L E K+KL Sbjct: 60 MFKSKASLLNVALEDGMEVMVKGRASIYTATGSFQLYCDEIKKEGQGELFIKFEALKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 + G F +++K IP K I V+TS TGAVIRDI+ R P + +I++P KVQGD+ Sbjct: 120 SKSGYFDEKYKKNIPMYAKRIGVVTSSTGAVIRDIINVTKRRNPLVDIILYPAKVQGDDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 KEI I N D+II+ RGGGSIE+LW+FN+E + + I NS +PIISA Sbjct: 180 YKEIIAGIEYFNK------NKNIDLIIVGRGGGSIEELWNFNEEELAKVIFNSKLPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RA TP+ AAE+AVP+ + + + + L+ I + +K + Sbjct: 234 VGHEVDFTISDFVSDVRAATPSQAAEIAVPLLSDINTKIYEISKSLDYEIQKKLKDCKSR 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L S + L + + S +D+L L ++I I R+ + + N + ++ I Sbjct: 294 LESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPIK 353 Query: 365 NIQKNRQHILEKQQHI 380 + K I ++ +I Sbjct: 354 VLNKGYAIIEDENNNI 369 Score = 87.9 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + + + ++I + + KL R+ F + KIK + +L + Sbjct: 293 RLESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPI 352 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 L +GY I+D NNN I + L + I ++ DG Sbjct: 353 KVLNKGYAIIEDENNNIIKEISQLNEEKEISVSLSDGNIK 392 >gi|154148736|ref|YP_001406844.1| exodeoxyribonuclease VII large subunit [Campylobacter hominis ATCC BAA-381] gi|166232348|sp|A7I2V3|EX7L_CAMHC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|153804745|gb|ABS51752.1| exodeoxyribonuclease VII, large subunit [Campylobacter hominis ATCC BAA-381] Length = 387 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 116/349 (33%), Positives = 187/349 (53%), Gaps = 10/349 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VSEL+ K ++ES+ + V GEIS + +SGH YF+LKD + I ++K T + Sbjct: 2 TVSELNEQAKSLLESHFPSIEVVGEISRFTRQPTSGHWYFTLKDEKASISCAMFKSTALR 61 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++F+P++G++ ++ GK++ + + YQII S+ +G G L K+KL +EGLF++ Sbjct: 62 VKFIPKDGLKVIITGKVSIYSPTGNYQIIAASMKLAGEGELEAKFSALKQKLSDEGLFAE 121 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 ++K P+P P+ IA +TS + A +D+L+ RF +++ + V VQG+ + +A+ Sbjct: 122 EYKKPLPKFPQKIAFLTSLSSAAYQDMLRVARDRFALVKIDAYSVFVQGENTASSVISAL 181 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + D II+ARGGGS EDLW FNDE + RAI + P+ISAIGHE D++ Sbjct: 182 KTADK-------KDYDCIIIARGGGSKEDLWGFNDENLARAIFAAHTPVISAIGHEIDFS 234 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D+ AD R+ TPT A +P L L + L N I K N LN +L Sbjct: 235 ISDFVADHRSLTPTAAMMDLLPDVNTLLQDLSGADNFLINFINSCFKKCENALNVANLSL 294 Query: 315 --PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + D + L +LE+ ++ + N +KS Sbjct: 295 KTKSVDSKILKFENDLREGESKLENFIKFRLSNFENRLNLNTQILKSKA 343 >gi|189500985|ref|YP_001960455.1| exodeoxyribonuclease VII large subunit [Chlorobium phaeobacteroides BS1] gi|189496426|gb|ACE04974.1| exodeoxyribonuclease VII, large subunit [Chlorobium phaeobacteroides BS1] Length = 403 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 126/362 (34%), Positives = 200/362 (55%), Gaps = 6/362 (1%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + +++EL+ +K +E + V+GEIS ++ + SGH Y +LKD ++I A++W Sbjct: 1 MSEQILTITELTREIKSDLEHRFPAISVKGEISNFK-LPGSGHIYMTLKDEGAQIPAVLW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K ++ ++G+E + G+I +P S +YQ+I S+ +G+G L A +KL Sbjct: 60 KNVRMRLPIELKDGMEIIAHGRIEVYPPSGRYQLICTSVSLAGAGMLQQAFAMLLEKLAG 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G F+ +HK P+P IP+ I ++TS TGAVI D+ + RFP ++++FPVKVQG + + Sbjct: 120 QGYFNQEHKKPLPGIPEKIGLVTSATGAVIEDMSNVLKRRFPAAKLLLFPVKVQGADAAQ 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I NA+ N +PDIII+ARGGGS+EDL FN+E + AI +S+IP+ISA+G Sbjct: 180 NIINALSYFN--HPLDPAHKPDIIIVARGGGSLEDLQAFNEENVALAIFSSTIPVISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINT 306 HETD T+AD AD+RA TP+ AAE+A P L L R + + I+ + Sbjct: 238 HETDVTIADMVADMRAGTPSIAAEIAAPDTRELLKHNEALLDRQSTALYSKIEGTERQLH 297 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 A TL + R+D R + +L R R F+ + R+ + Sbjct: 298 SLLGSYAFNRPQVTLERMQERIDHSVRFMTQSLRSAFMRTERRFSSVTERLSLLDYRKTL 357 Query: 367 QK 368 ++ Sbjct: 358 ER 359 Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 2/134 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL-HMLREQTKNRIFYLHTHIKKLITRIE 428 R+ + + +++ I +++ ++L + + + + I + + Sbjct: 268 RELLKHNEALLDRQSTALYSKIEGTERQLHSLLGSYAFNRPQVTLERMQERIDHSVRFMT 327 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L S T L Y+ TL+RG+T ++ IT +L + Sbjct: 328 QSLRSAFMRTERRFSSVTERLSLLDYRKTLERGFTLVRKEK-RAITSSTDLYEGDMASVI 386 Query: 489 FFDGQANAIVINKA 502 F DG+ + K Sbjct: 387 FHDGETAVTITGKE 400 >gi|260887339|ref|ZP_05898602.1| exodeoxyribonuclease VII, large subunit [Selenomonas sputigena ATCC 35185] gi|260862975|gb|EEX77475.1| exodeoxyribonuclease VII, large subunit [Selenomonas sputigena ATCC 35185] Length = 409 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 131/358 (36%), Positives = 202/358 (56%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS L+ ++K + VE L +V V GE+S Y+ +SGH YF+LKD + + +++K Sbjct: 14 SVSALTQYIKSMFQVEGLLRNVSVEGELSNYKMY-ASGHCYFTLKDETASLKGVMFKSRA 72 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ + G+++ + YQ+ +E L+P G+G L A E+ K +L EGLF Sbjct: 73 RLLRFQPENGMKVVATGEVSVYERDGVYQLYVERLLPVGAGELSVAFEQLKARLAAEGLF 132 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIAN 192 ++ HK P+P P+ I ++TS +GAV+RDI + R +R++++P VQG+ EIA Sbjct: 133 NEDHKKPLPPFPRTIGIVTSLSGAVLRDIYRVSKRRDANIRLVLYPTLVQGEGAAAEIAA 192 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N D++I+ RGGGS EDLW FN+E +VRAI +S IP+ISA+GHETD Sbjct: 193 AIRFFNEKYP------VDLLIVGRGGGSAEDLWAFNEEPVVRAIYDSVIPVISAVGHETD 246 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL+DYA+D+RA TP+ AAE+AVP L + E RL + + Y+ + L Sbjct: 247 TTLSDYASDVRAATPSQAAELAVPETAALFRRIGECEMRLQKAVKSRLYYERERVERLGG 306 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L+ R RLD L+ + + K F +++ +H I++ Sbjct: 307 FFLKRPPQALLADRRQRLDMAAEALDRGMRRALLEKQHAFRVAAEKLEMLNPLHVIRR 364 Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 3/130 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I E + +++ VK L Y + L+ + + + ++ Sbjct: 277 RRIGECEMRLQKAVKSRLYYERERVERLGG--FFLKRPPQALLADRRQRLDMAAEALDRG 334 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + + L+ + ++RGY+ ++ + + + LA IL+ Sbjct: 335 MRRALLEKQHAFRVAAEKLEMLNPLHVIRRGYSVVE-KDGAAVRSVKELAAGDGILVRLA 393 Query: 491 DGQANAIVIN 500 DG +A+V Sbjct: 394 DGSFDAVVGG 403 >gi|166030415|ref|ZP_02233244.1| hypothetical protein DORFOR_00076 [Dorea formicigenerans ATCC 27755] gi|166029773|gb|EDR48530.1| hypothetical protein DORFOR_00076 [Dorea formicigenerans ATCC 27755] Length = 403 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 117/364 (32%), Positives = 190/364 (52%), Gaps = 13/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + Y+V +++ ++K++ + L+ + V+GE+S + H+SGH YFSLKD I + Sbjct: 1 MTRNVYTVGQVNAYIKNMFTQDYMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F EG + +V+G++ + YQ+ + G G L + K++L Sbjct: 60 MFAGQRGGLSFRMCEGQQIVVLGQVNVYERGGSYQLYAREIRLDGEGVLYERFQALKREL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 E G+F+ ++K PIP + I V+T+PTGA IRDI+ R P ++I++P VQG+ Sbjct: 120 EEMGMFASEYKMPIPAYARRIGVVTAPTGAAIRDIMNISRRRNPFVQLILYPALVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I I L+ D+II+ RGGGSIEDLW FN+E + RAI P+ISA Sbjct: 180 KESIVKGIRMLDQ-------DDIDVIIVGRGGGSIEDLWAFNEEEVARAIFYCRTPVISA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+ADY ADLRAPTP+ AAE+AV Q + ++L + R ++ Sbjct: 233 VGHETDTTIADYVADLRAPTPSAAAELAVYDYWKTQEQVDVRRSQLQGYLRRKMEVSRLR 292 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L + + L R RL +L L + + F + ++K + Sbjct: 293 IEKYETKLKYLHPEHKLQEDRQRLVDTEEKLHMLLHRKVEQYRHRFAVYMEQMKGLSPLQ 352 Query: 365 NIQK 368 + + Sbjct: 353 KLNQ 356 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 50/136 (36%), Gaps = 2/136 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 K ++ + ++ ++ +++ + L ++ L L ++++ + + Sbjct: 265 WKTQEQVDVRRSQLQGYLRRKMEVSRLRIEKYETKLKYL--HPEHKLQEDRQRLVDTEEK 322 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + +L K++ ++ ++ + L +GY I+D + + + + Sbjct: 323 LHMLLHRKVEQYRHRFAVYMEQMKGLSPLQKLNQGYAYIEDVDKKAVRSIEQVRCGDHLS 382 Query: 487 INFFDGQANAIVINKA 502 DG IV + Sbjct: 383 AYVTDGSIQMIVESVK 398 >gi|197301785|ref|ZP_03166855.1| hypothetical protein RUMLAC_00511 [Ruminococcus lactaris ATCC 29176] gi|197299225|gb|EDY33755.1| hypothetical protein RUMLAC_00511 [Ruminococcus lactaris ATCC 29176] Length = 408 Score = 284 bits (726), Expect = 3e-74, Method: Composition-based stats. Identities = 113/360 (31%), Positives = 195/360 (54%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V +++ ++K++ + + + V+GE+S + H+SGH YFSLKD I +++ G Sbjct: 11 VYTVRQVNSYIKNMFAQDFMLNRIYVKGEVSNLK-YHTSGHIYFSLKDESGTIACVMFAG 69 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + + F EEG + +V+G + + KYQ+ ++ G G L E KK+L E G Sbjct: 70 SRSGLSFRMEEGQQIIVLGAVDVYARDGKYQLYARKIVRDGVGLLYERFELLKKELQEMG 129 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 +F+ ++K IP + + V+T+PTGA +RDI+ R P ++I++P VQG+ + I Sbjct: 130 MFAPEYKQKIPKYIRRLGVVTAPTGAAVRDIINITKRRNPFVQIILYPALVQGEGASESI 189 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L + D++I+ RGGGS+EDLW FN+E + RA+ + S+P+ISA+GHE Sbjct: 190 VKGIHALEA-------EKVDVMIVGRGGGSMEDLWAFNEEAVARAVFDCSVPVISAVGHE 242 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ D+ ADLRAPTP+ AAE+AV ++ +L E RL + + +++ K L Sbjct: 243 TDTTIIDFVADLRAPTPSAAAELAVYDFMEMKKNLKLREERLLHFMQLILERKRQKLEQY 302 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + Q L+ R L + + ++ + R+K + + + Sbjct: 303 SLRMRAYHPQQRLNEQRQFAADAENRLRREMMRRLEQEKYRLGLMAERLKGLSPLEKLSQ 362 Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 52/140 (37%), Gaps = 2/140 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + ++++ +++ + ++ L + ++ L M + R+ Sbjct: 270 FMEMKKNLKLREERLLHFMQLILERKRQKLEQY--SLRMRAYHPQQRLNEQRQFAADAEN 327 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + +++ + + L+ + L +GY +++++ + N+ +I Sbjct: 328 RLRREMMRRLEQEKYRLGLMAERLKGLSPLEKLSQGYAYVENSSGANVRTVSNVKQGEQI 387 Query: 486 LINFFDGQANAIVINKAPPK 505 + DG+ A V + Sbjct: 388 TVYVTDGRIRAEVTGVEKEE 407 >gi|157150418|ref|YP_001449995.1| exodeoxyribonuclease VII large subunit [Streptococcus gordonii str. Challis substr. CH1] gi|189037816|sp|A8AW35|EX7L_STRGC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157075212|gb|ABV09895.1| exodeoxyribonuclease VII, large subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 446 Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 159/500 (31%), Positives = 235/500 (47%), Gaps = 63/500 (12%) Query: 13 PEY-SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 PEY SVS L+ +LK E + L V + G++S +R + H YFSLKD + I IW Sbjct: 2 PEYLSVSTLTKYLKMKFERDPYLERVYLTGQVSNFRRRPN--HQYFSLKDEKAVIQVTIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGVYQKLGFELEEGMKINVIGRVQLYEPSGSYSIIIEKAEPDGIGALAIQFEQLKKKLGE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K +P PK I V+TSP+GAVIRDI+ +S RFP + ++++P KVQGD Sbjct: 120 EGLFQDKFKQSLPQFPKKIGVVTSPSGAVIRDIITTVSRRFPGVEIVLYPTKVQGDGAAA 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +IA+ I N + D++I+ RGGGSIEDLW FN+E VRAI S IP+IS++G Sbjct: 180 QIADHIRLANERSD------LDVLIIGRGGGSIEDLWAFNEEETVRAIFESRIPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTL 307 HETD TLAD+AAD RA TPT AAE+A PV + L L E R++ I + Y L Sbjct: 234 HETDTTLADFAADRRAATPTAAAELATPVTKLDLLGHLQQQENRMSRAISNRLSYYRERL 293 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 N L + ++ +LD+L L+ + + + + +R+++ Sbjct: 294 NKLTQSVIFRQPERLYDGHLQKLDQLNLRLKQKIREYYSEEKQRVKILQHRLEALNPHSR 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ ++ + ++ + + + + Sbjct: 354 VQRLQEQTAQLERLLRSNMAVIYDNKVAQVRR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY +Q N I + K + Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVQ-KNQKVIESSAGIEEKDEL 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQLEVEVKHVQRKE 445 >gi|226949183|ref|YP_002804274.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A2 str. Kyoto] gi|254783695|sp|C1FPB2|EX7L_CLOBJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|226843200|gb|ACO85866.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum A2 str. Kyoto] Length = 401 Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 127/376 (33%), Positives = 221/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+I+ + Sbjct: 1 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F+PE G++ + +G ++ + YQ+ ++ + G G L A EK K+KL Sbjct: 60 MFKSYAYNLKFVPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF D HK IP K + VITSPTGA ++DI+ R + ++I+P VQG + Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + I LN +++ DIIILARGGGSIE+LW FN+E + A+ NS PII+ Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+AV +E L + ++N + + N + +IK K + Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRSY 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + + +D L L +E + ++ + + + + +++ ++ Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K I ++ ++ Sbjct: 354 VLKKGYTLIEDEGNNL 369 Score = 82.5 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 47/101 (46%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ ++S + +L++ N Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 LK+GYT I+D NN IT+K +L +I I F DG+A + Sbjct: 355 LKKGYTLIEDEGNNLITEKESLKKLNKINIIFKDGRAKLSI 395 >gi|315924278|ref|ZP_07920502.1| exopolyphosphatase [Pseudoramibacter alactolyticus ATCC 23263] gi|315622439|gb|EFV02396.1| exopolyphosphatase [Pseudoramibacter alactolyticus ATCC 23263] Length = 397 Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats. Identities = 117/359 (32%), Positives = 197/359 (54%), Gaps = 12/359 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV+E++ +K ++ +N L + ++GE+S ++ +SGH YFSLKD +RI ++++ Sbjct: 6 LSVTEVNRFVKTLIATNSVLKSLEIKGEVSNFK-RQASGHLYFSLKDVGARIGCVMFRSD 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++F PE+G+ + G++ F + +YQI + ++ P+G G L E K+ L G Sbjct: 65 AAHLDFEPEDGMHVVCKGRVDVFEQAGQYQIYVRTMQPAGIGDLYRGFETLKRTLETLGY 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F K IP + + V+TSPTGA I DI+ R P L +I+ P +VQG E IA Sbjct: 125 FDASAKKKIPETIEAVGVVTSPTGAAIHDIISVCHRRDPHLEIILAPAQVQGTEAGASIA 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 +AI QL+ L D+II+ RGGGS+EDLW FN+ ++ AI + PIISA+GHET Sbjct: 185 SAIQQLDQL------DSIDVIIVGRGGGSMEDLWAFNERIVADAIYKAKTPIISAVGHET 238 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+ ADLR PTP+ AAE ++ + L +L+ L + ++I ++ + Sbjct: 239 DFTIADFVADLRVPTPSAAAETLTWDQQAVWHQLNDLQGILQQEVQQVIANHREAVDLIA 298 Query: 312 KAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L N + + R +D L + + +R ++ ++ + H +++ Sbjct: 299 RLLLAHNPEAMIDSQRMVIDYFQERLVQGGRQQLAQLHRALDNYRIKLVAFNPRHALKR 357 Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 21/137 (15%), Positives = 54/137 (39%), Gaps = 2/137 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKL 423 + ++Q + + ++ I++Q ++ + +E + ++ L + I I Sbjct: 261 LTWDQQAVWHQLNDLQGILQQEVQQVIANHREAVDLIARLLLAHNPEAMIDSQRMVIDYF 320 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R+ ++ H ++ L +F ++ LKRG+ + + + + T Sbjct: 321 QERLVQGGRQQLAQLHRALDNYRIKLVAFNPRHALKRGFAWVHTESGELVRSVDHAKTAG 380 Query: 484 RILINFFDGQANAIVIN 500 + ++F DG A V Sbjct: 381 NLRLSFADGDVKAKVEQ 397 >gi|149176949|ref|ZP_01855558.1| exodeoxyribonuclease VII large subunit [Planctomyces maris DSM 8797] gi|148844204|gb|EDL58558.1| exodeoxyribonuclease VII large subunit [Planctomyces maris DSM 8797] Length = 409 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 132/364 (36%), Positives = 209/364 (57%), Gaps = 11/364 (3%) Query: 9 SLDHPE-YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 SL PE SV+E + +K++VE+N + V GEIS SGH Y +LKD+ +++ A+ Sbjct: 2 SLAEPEILSVTETTRQIKNLVEANFPYAWVVGEISNCTM-ARSGHVYLTLKDDSAQLRAV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 IWK T ++++F E+G+E + G + + YQ+ IE LIP G G L A + ++KL Sbjct: 61 IWKRTASRLKFQIEDGMEVIAAGPVEVYQARGTYQLNIEQLIPQGVGALELAFRQMQEKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EGLF+ +HK PIP P+ IA++TSPT A +RD+LQ I+ R+ ++I PV VQG+ Sbjct: 121 AAEGLFNPEHKQPIPQFPRKIALVTSPTSAAVRDMLQVITRRWKAADLVIVPVAVQGEGA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++IA I + P D II RGGGS+EDLW FN+E++ RAI IPIISA Sbjct: 181 AEQIAAGIETAARI------PGVDTIITGRGGGSLEDLWAFNEEVVARAIFACPIPIISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D ++AD AD RA TP+ AAE++VP++ + ++L + + +L + + + Sbjct: 235 VGHEIDISIADLVADRRALTPSEAAELSVPLQSDVLATLTHWQNQLATNLKQRARQVRLQ 294 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+++ L + ++D L R L+ + II R H+ + + + + Sbjct: 295 LDAIAGRPALTRPLDLVHQRAAQVDELDRRLKRSTREIISRYQTETRHLGSALDALSPLK 354 Query: 365 NIQK 368 + + Sbjct: 355 VLNR 358 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 38/139 (27%), Gaps = 8/139 (5%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + Q + +KQ R + L+ + + + + +L R++ Sbjct: 273 LTHWQNQLATNLKQRARQVRLQLDAIAGR--PALTRPLDLVHQRAAQVDELDRRLKRSTR 330 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN------NFITQKRNLATKTRIL 486 I T L + + L RGY+ + N + + + Sbjct: 331 EIISRYQTETRHLGSALDALSPLKVLNRGYSITRKETEDEPSTLNIVKSISQVKPGEVLH 390 Query: 487 INFFDGQANAIVINKAPPK 505 DG + + Sbjct: 391 TRISDGTIISQIQEIRKDS 409 >gi|291544836|emb|CBL17945.1| exodeoxyribonuclease VII, large subunit [Ruminococcus sp. 18P13] Length = 402 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 126/400 (31%), Positives = 210/400 (52%), Gaps = 13/400 (3%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 ++VSEL+ ++ + ++ L + +RGEIS + SGH YF+LKD S + A+++ Sbjct: 4 FTVSELNRYIAFQLKGDARLQGILLRGEISNFTCYRKSGHCYFTLKDADSAVKAVMFASY 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +K+ F P +G+ + +G + F YQ+ + L P G G A + K+KL G Sbjct: 64 ASKLRFDPRDGMRVIAVGSVGVFERDGAYQVYVNDLQPDGVGANYIAFLQLKEKLSGLGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K + +PK I VITSP GA ++DIL I R P+ V+++P VQG++ P IA Sbjct: 124 FDEAAKQSLSALPKKIGVITSPEGAALQDILHIIGRRCPIAEVVVYPAMVQGEQAPGTIA 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ Q + D++IL RGGGS EDL FN E + +AI + IP+ISA+GHET Sbjct: 184 AAVQQASQS-------DCDVLILGRGGGSAEDLQAFNTEAVAKAIHDCPIPLISAVGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD AD+RAPTP+ AAE+AVP E L++ + L RL + + + +L +L Sbjct: 237 DYTIADLTADMRAPTPSAAAELAVPTMEQLRNGVDALNHRLADGMEHRLSQAERSLQALR 296 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + L + + L+ + RL+++ L + I R+ + R+ S + + + Sbjct: 297 QRLAVCSVEGRLNLWQERLEQMQNRLNQSAANGIARREAQLMQQLARLDSLSPVKVLTRG 356 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 ++ + + V+Q L + + + + Sbjct: 357 -YALVYHENKLITSVQQAAPGDELHIRLGDGEIQAVVQAP 395 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 45/133 (33%), Gaps = 3/133 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ R + + R E+ + + + R+ ++++ Sbjct: 263 MEQLRNGVDALNHRL--ADGMEHRLSQAERSLQALRQRLAVCSVEGRLNLWQERLEQMQN 320 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ ++ I + L S + L RGY + N IT + A + Sbjct: 321 RLNQSAANGIARREAQLMQQLARLDSLSPVKVLTRGYALVYHEN-KLITSVQQAAPGDEL 379 Query: 486 LINFFDGQANAIV 498 I DG+ A+V Sbjct: 380 HIRLGDGEIQAVV 392 >gi|331269443|ref|YP_004395935.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum BKT015925] gi|329125993|gb|AEB75938.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum BKT015925] Length = 401 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 126/376 (33%), Positives = 210/376 (55%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SVSEL+ ++K I++++ + ++GEIS ++ H+SGH YFSLKD S+I+ + Sbjct: 1 MHIKTLSVSELNIYIKRIIDNDFILKNTQIKGEISNFKF-HNSGHVYFSLKDKQSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + F+P G ++ G+++ + YQ E + G G L A EK KKKL Sbjct: 60 MFRSYTENLNFIPNNGDNVIIKGRVSVYQKDGVYQFYCEEIEKEGIGDLFIAFEKSKKKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF + +K IP K I VITS TGA I+DI+ R + ++I+P VQG+ Sbjct: 120 YEEGLFDEGYKKRIPLYSKKIGVITSTTGAAIKDIINVSKRRNRGIEILIYPSLVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I L++ D+II+ARGGGSIE+LW FN+E + I S PIIS Sbjct: 180 SDNLIQGIKYLDSR------DDVDLIIIARGGGSIEELWAFNNEALAYEIYRCSTPIISG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D+RAPTP+ AAE+AV E + ++ N + +L N+I ++ ++ Sbjct: 234 VGHETDFTICDFVSDMRAPTPSAAAELAVCNLEEINGNIENYKEKLYNLIKHIMNLQLKQ 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LNS A+ N T+ +++ L +L H ++ I + + + + + + ++ Sbjct: 294 LNSYENAIKVNNPLNTIVNEYIKVENLKNKLCHEIQSKIEYEKIKLSKVNSLLNAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 + K I ++ +I Sbjct: 354 ILSKGFSIIQDEMNNI 369 Score = 87.5 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 2/140 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 N+++ +I ++ + ++K + + + + N I + ++ L Sbjct: 264 NLEEINGNIENYKEKLYNLIKHIMNLQLKQLNSYENAIKV--NNPLNTIVNEYIKVENLK 321 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + KI+ +S +L + N L +G++ IQD NN I+ K N+ Sbjct: 322 NKLCHEIQSKIEYEKIKLSKVNSLLNAHNPLNILSKGFSIIQDEMNNIISTKDNINKDDC 381 Query: 485 ILINFFDGQANAIVINKAPP 504 I I F DG+ V P Sbjct: 382 IKITFKDGETKVKVSEVYKP 401 >gi|110803541|ref|YP_699105.1| exodeoxyribonuclease VII large subunit [Clostridium perfringens SM101] gi|123341678|sp|Q0SS02|EX7L_CLOPS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|110684042|gb|ABG87412.1| exodeoxyribonuclease VII, large subunit [Clostridium perfringens SM101] Length = 400 Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats. Identities = 118/375 (31%), Positives = 202/375 (53%), Gaps = 12/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++K +VE++ ++ V+GEIS + HSSGH YFSLKD +S+++ I Sbjct: 1 MKLKTLSVGEVNNYVKKLVENDFILKNLNVKGEISNLKF-HSSGHIYFSLKDENSKVNCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F EEG++ + ++ + YQ+ E++ +G G L K KK+L Sbjct: 60 MFKNNAVNLDFRLEEGMKVEIKARLGVYHKEGTYQLYCENIKKAGIGELFEEFHKLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEG+F +++K +P PK I +IT+ TGA +RDI+ I R L +I++P KVQG+ Sbjct: 120 SEEGIFDEKYKRALPKFPKRIGIITAKTGAAVRDIINVIQRRNKSLDIILYPAKVQGENA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I N D+IIL RGGG IE+LW FN+ + I NS IP +SA Sbjct: 180 ADSIIEGIRYFN------NEKSVDVIILGRGGGFIEELWAFNNRDLAYEIFNSRIPTVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RAPTP+ A E+ P + + + L+N + L+ I R Sbjct: 234 VGHEVDFTISDFVSDMRAPTPSAAGELVSPSLQEMINDLLNKKEFLHRAIDRKFLNAKRD 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++ L K L N + ++ L +L + I + + + +++ ++ Sbjct: 294 VDLLYKGLKGNNPKDIIEKRIKEVNSLEEKLNFLGKRKIDKAKDELIALNSILQTLNPLN 353 Query: 365 NIQKNRQHILEKQQH 379 + + I++K+ Sbjct: 354 TLGRGYSVIMDKEDK 368 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 2/134 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ +L K++ + + + + +++ ++ + + K+ I + L Sbjct: 265 LQEMINDLLNKKEFLHRAIDR--KFLNAKRDVDLLYKGLKGNNPKDIIEKRIKEVNSLEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ F+ KI + ILQ+ NTL RGY+ I D + I L + Sbjct: 323 KLNFLGKRKIDKAKDELIALNSILQTLNPLNTLGRGYSVIMDKEDKVINNVSELKKNDMV 382 Query: 486 LINFFDGQANAIVI 499 + DG N + Sbjct: 383 KVIMKDGSVNIDIK 396 >gi|149928090|ref|ZP_01916337.1| exodeoxyribonuclease VII large subunit [Limnobacter sp. MED105] gi|149823176|gb|EDM82413.1| exodeoxyribonuclease VII large subunit [Limnobacter sp. MED105] Length = 455 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 113/491 (23%), Positives = 207/491 (42%), Gaps = 58/491 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +SVS+L+ HL + + + ++GE++ + SSGH Y +LKD +++ A++++ Sbjct: 7 VFSVSQLARHLNDHLRNEFGAIRIQGEVASFT-RASSGHWYLALKDESAQMKAVMFRQRN 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 F P G + V+ ++ + + Q+I++ + +G G L + K KL +EGLF Sbjct: 66 VLAGFFPAVGDKVEVLAQLAMYEQRGELQLIVDVMKKAGQGNLHEQYLQLKTKLTQEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+P + + V+TS A + D+ Q ++ R P + ++ VQG++ +I Sbjct: 126 DSARKRPLPSVVFNLGVVTSLQAAALADVKQALARRAPHVEFSVYHTAVQGEQAAAQIIE 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ + ++ + ++L RGGGS+EDLW FN E +VRA+A PI+ +GHETD Sbjct: 186 ALRKADSAGH-------EALVLCRGGGSLEDLWSFNVEAVVRAVAACKTPIVVGVGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TLA++AADLRA TPT AAE+ L + + L L + + + ++ Sbjct: 239 VTLAEFAADLRAATPTAAAELISRPTRELLAEIQGLHVGLRKALRHRAQMLVQRVDRAEL 298 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L L+ RL L +E I + + + Sbjct: 299 GLLTPTAYLNTLESRLGHASSRLPRLVERGIAEETNAIQAL------------WESMSFE 346 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + Q + + + ++ IA L Sbjct: 347 MSATQNAATRSAQLLESRLMAVQRHNIAALD----------------------------- 377 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRILINFFD 491 + V ++++ + + TL+RGY +Q + + ++ + D Sbjct: 378 -------SRVDRLGSVVEAVSPQRTLERGYAFLQPQHGDAVVRSVADVQAGDALRATLAD 430 Query: 492 GQANAIVINKA 502 G+ V K Sbjct: 431 GEILVNVREKT 441 >gi|168184571|ref|ZP_02619235.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum Bf] gi|237795300|ref|YP_002862852.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum Ba4 str. 657] gi|259646286|sp|C3KXC6|EX7L_CLOB6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|182672368|gb|EDT84329.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum Bf] gi|229262295|gb|ACQ53328.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum Ba4 str. 657] Length = 401 Score = 283 bits (724), Expect = 5e-74, Method: Composition-based stats. Identities = 128/376 (34%), Positives = 219/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+I+ + Sbjct: 1 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F PE G++ + +G ++ + YQ+ ++ + G G L A EK K+KL Sbjct: 60 MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF D HK IP K + VITSPTGA ++DI+ R + ++I+P VQG + Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDS 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 K + I LN +++ DIIILARGGGSIE+LW FN+E + ++ NS PII+ Sbjct: 180 SKTLIEGIKTLNKVED------VDIIILARGGGSIEELWAFNNEELAYSVYNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+AV +E L + ++N + + N + +IK K N Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRNY 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + + +D L L +E + ++ + + + +++ ++ Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNDLSRLSSLLEAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K I ++ ++ Sbjct: 354 VLKKGYTLIEDEGNNL 369 Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 45/101 (44%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ +S + +L++ N Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNDLSRLSSLLEAHNPLNV 354 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 LK+GYT I+D NN IT+K L +I I F DG+A + Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKELNKINIIFKDGRAKLSI 395 >gi|160893230|ref|ZP_02074018.1| hypothetical protein CLOL250_00776 [Clostridium sp. L2-50] gi|156865313|gb|EDO58744.1| hypothetical protein CLOL250_00776 [Clostridium sp. L2-50] Length = 401 Score = 283 bits (724), Expect = 5e-74, Method: Composition-based stats. Identities = 124/363 (34%), Positives = 197/363 (54%), Gaps = 14/363 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + Y+V +++ ++K+++ S+ L + V+GE+S + HSSGH YFSLKD I A+ Sbjct: 1 MAKKSYTVGQVNGYIKNLISSDYLLGDIYVKGEVSNCK-YHSSGHIYFSLKDETGSIMAV 59 Query: 68 IWKGTL-NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++K + ++F E G + + G + + +YQ+ ++ + G G L E+ K+K Sbjct: 60 MFKSYAYSGLDFKLENGQQVVCHGSVNIYERDGRYQLYVKEIKLDGIGNLYERYEQLKQK 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L E+GLF K PIP PK + ++T+ TGA I+DI R P +++I++PVKVQGD Sbjct: 120 LYEQGLFEFDIKKPIPAYPKRVGIVTAQTGAAIQDIRNIAKRRNPYVQLILYPVKVQGDG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 ++IA+ I L+ + D II+ RGGGSIEDLW FN+E++ AI ++ PIIS Sbjct: 180 AAEDIAHGIEVLDNM-------GVDTIIIGRGGGSIEDLWAFNEEVVAWAIYHAKTPIIS 232 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 GHE D T+ADYAADLRAPTP+ A E A+P +IN +++ ++ R + Sbjct: 233 GTGHEIDNTIADYAADLRAPTPSAACEQAIPDVMSTVHQVINQGRQMDYLMKRRLAAYQE 292 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + + L N Q L+ + LD L L ++ R + R+ Sbjct: 293 KLQAAERHLRILNPKQRLAQQQIYLDDLSDRLNRAMKNKYDRYEHRVMLLAERLHGLSPS 352 Query: 364 HNI 366 + Sbjct: 353 AKL 355 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 2/151 (1%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK-KEKIAILHMLREQTKN 411 + S I + + Q+ R + + K + A H+ K Sbjct: 249 LRAPTPSAACEQAIPDVMSTVHQVINQGRQMDYLMKRRLAAYQEKLQAAERHLRILNPKQ 308 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 R+ ++ L R+ + +K V + L + L G+ I+ Sbjct: 309 RLAQQQIYLDDLSDRLNRAMKNKYDRYEHRVMLLAERLHGLSPSAKLINGFGYIE-KTGT 367 Query: 472 FITQKRNLATKTRILINFFDGQANAIVINKA 502 +T + + RI I DG V + Sbjct: 368 PVTTIKEIEKDDRITIRVHDGLIETRVTDVK 398 >gi|170754662|ref|YP_001781436.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum B1 str. Okra] gi|226694644|sp|B1IMN8|EX7L_CLOBK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|169119874|gb|ACA43710.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum B1 str. Okra] Length = 403 Score = 283 bits (724), Expect = 5e-74, Method: Composition-based stats. Identities = 128/376 (34%), Positives = 219/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+I+ + Sbjct: 1 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F E G++ + +G ++ + YQ+ ++ + G G L A EK K+KL Sbjct: 60 MFKSYAYNLKFALENGMDVVALGNVSVYEKEGSYQLYVKDIKREGIGDLYVAFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EEGLF D HK IP K + VITSPTGAV++DI+ R + ++I+P VQG Sbjct: 120 KEEGLFDDVHKKEIPKFSKKVGVITSPTGAVLKDIINVTKRRNKGIELLIYPALVQGTNA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + I LN +++ DIIILARGGGSIE+LW FN+E + A+ NS PII+ Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+AV +E L + ++N + + N + +IK K N Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNSMENIIKEKRNY 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + + +D L L +E + ++ + + + + +++ ++ Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K I ++ ++ Sbjct: 354 VLKKGYTLIEDEGNNL 369 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ ++S + +L++ N Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 LK+GYT I+D NN IT+K L +I I F DG+A + Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKKLNKINIIFKDGRAKLSI 395 >gi|269215507|ref|ZP_06159361.1| exodeoxyribonuclease VII, large subunit [Slackia exigua ATCC 700122] gi|269130994|gb|EEZ62069.1| exodeoxyribonuclease VII, large subunit [Slackia exigua ATCC 700122] Length = 476 Score = 283 bits (723), Expect = 6e-74, Method: Composition-based stats. Identities = 111/496 (22%), Positives = 196/496 (39%), Gaps = 37/496 (7%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 + V+E + + S V + GE+S YF++KD S + ++W Sbjct: 15 RKPFGVTEAIARMNGYL-SGFPLV-ILGEVSEVNAKRGYSAVYFTIKDQKSSLPCMMWNT 72 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + G++ V G+ + + S +G G L ++ + L EG Sbjct: 73 IYERTS-GLRVGMKIEVAGQFDIYAPKGRMSFKASSFKIAGEGNLRQKVDALARALRSEG 131 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 L D K P+P P+ + V+TSP G +RD+L+ + RFPL V + V V+G + + Sbjct: 132 LMDDARKRPVPRFPEKVCVVTSPRGDAVRDVLRTLRRRFPLATVSVAGVPVEGKTAAEGM 191 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ D+I+L RGGGS EDL FNDE + RA+A S +P+++ IGHE Sbjct: 192 VRALAAC-------ALEGCDVILLVRGGGSFEDLMPFNDEALARAVAASPVPVVTGIGHE 244 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T+AD +D RA TPT AAE P E + + + RL+ + ++ L+++ Sbjct: 245 PDTTIADMVSDHRASTPTAAAEAVSPSPEQMNALFASYAERLSGPLGHRLERTRIRLDAV 304 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 D +I + +R+ ++ +NR Sbjct: 305 AGRPVFRDSA--------------------ALIAEDLMRLDMASDRLHRALP-ESLARNR 343 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + V R LE + L K + + R+ I Sbjct: 344 TSLDAYEGRLRRSVSFDARRTRLESMQ-----TRLNASGKRILDHEAAAFGSATERMRAI 398 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + +++ L + + L RGY D + + + + I + Sbjct: 399 GATLTSAARHDLALRAGHLHDLSPLSILSRGYAMATDKDGHVVKHADAGLVGSAIKVRVS 458 Query: 491 DGQANAIVINKAPPKE 506 DG + V + + + Sbjct: 459 DGVLDCSVESVSQERR 474 >gi|87307780|ref|ZP_01089923.1| exodeoxyribonuclease VII large subunit [Blastopirellula marina DSM 3645] gi|87289394|gb|EAQ81285.1| exodeoxyribonuclease VII large subunit [Blastopirellula marina DSM 3645] Length = 417 Score = 283 bits (723), Expect = 6e-74, Method: Composition-based stats. Identities = 128/369 (34%), Positives = 199/369 (53%), Gaps = 9/369 (2%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + P +V++L+ +K +E+ V V GEIS SGH Y +LKD+ + Sbjct: 6 PSWEAAGEKPPVLTVAQLTALIKGTLETAFPAVWVSGEISNL-AQPRSGHIYLTLKDDAA 64 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I A++WKGT +K+ F E+G + + G + + YQ++I + P G G L AL+K Sbjct: 65 QIRAVMWKGTASKLNFDLEDGQQVICRGDLDVYAPRGSYQLVIRQIEPQGVGALQLALQK 124 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL EGLF K P+P P+ I V+TSPTGA IRD L+ + R+ V++ P +V Sbjct: 125 LQQKLAAEGLFDPGLKRPLPRFPRRIVVVTSPTGAAIRDFLEVLRRRWRGADVLVIPTRV 184 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG EIA AI + L PR D+++ RGGGS+EDLW FN+E +VRAIA I Sbjct: 185 QGAGAAAEIAAAIKKAAKL-----RPRADVLVATRGGGSMEDLWCFNEEPVVRAIAECEI 239 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D TL+D AAD+RA TP+ AAE+ VP + + +L N RL+ + + + Sbjct: 240 PVISAVGHEIDVTLSDLAADVRALTPSEAAELCVPSQSEVSEALDNYRVRLSQSLRQRAQ 299 Query: 302 YKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L+ + +A + ++ LD L + + + R+++ Sbjct: 300 MARRRLDALAERRAFIRPFSLVHDAQRLLDGWDERLLAAMRRQLQVNQQRVRQTTARLEA 359 Query: 360 DFLIHNIQK 368 + + + Sbjct: 360 LSPLAVLAR 368 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 49/138 (35%), Gaps = 2/138 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + Q ++Q + +R + + + R+ Sbjct: 281 EALDNYRVRLSQSLRQRAQMARRRLDALAERRAFIR--PFSLVHDAQRLLDGWDERLLAA 338 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +++ V TT L++ + L RGY+ ++ + + + ++A I Sbjct: 339 MRRQLQVNQQRVRQTTARLEALSPLAVLARGYSVTRNLDGGVLKKAEDVAVGDEIETILP 398 Query: 491 DGQANAIVINKAPPKEQP 508 G+ + V + +++ Sbjct: 399 SGRLTSRVESVDSEQKKA 416 >gi|304436642|ref|ZP_07396611.1| exodeoxyribonuclease VII large subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370338|gb|EFM23994.1| exodeoxyribonuclease VII large subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 402 Score = 283 bits (723), Expect = 6e-74, Method: Composition-based stats. Identities = 126/358 (35%), Positives = 200/358 (55%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+++ ++K + E LS + +RGE+S Y+ GHAYF+LKD S + +++ G Sbjct: 5 SVSDVTRYIKGMFEHEPILSDLLIRGEVSNYKRYPL-GHAYFTLKDAGSSMKCVMFNGYA 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ + G I+ + YQ+ + L P G+G L A E+ + +L EGLF Sbjct: 64 RNLRFAPENGMQVIAGGNISVYERDGAYQLYVSFLTPEGAGALALAFEQMRDRLAAEGLF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + HK P+P P+ I ++TS GAV+RDI R+P +++I+ PV VQG ++IA+ Sbjct: 124 DEGHKQPLPRFPRRIGIVTSSAGAVLRDIHNVSKRRWPGVQLILHPVLVQGAGAAEQIAD 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ N D++I+ RGGGS EDLW FN+E++VRA+ S IP+ISA+GHETD Sbjct: 184 AVAFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEVVVRAVYRSRIPVISAVGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL D+ +D RA TP+ AAE AVP ++ L+ L ARL+ R I + + L++L++ Sbjct: 238 TTLVDFVSDRRAATPSQAAEFAVPDAAEMERFLMGLRARLDAGRKRQIDHAVARLSTLVQ 297 Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 N ++ R DR EL + ++ R++ + + + Sbjct: 298 RPWCTNPRMLIAPLMQRSDRATAELHRAAKEQSVAARHRLELVLKRLELLNPVRVLYR 355 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 49/134 (36%), Gaps = 3/134 (2%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + ++ + ++ K+ + + + + I L + Sbjct: 264 AEMERFLMGLRARLDAGRKRQIDHAVARLSTLVQR--PWCTNPRMLIAPLMQRSDRATAE 321 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + + + + L+ L RG++ ++ + +++ +++ R+ Sbjct: 322 LHRAAKEQSVAARHRLELVLKRLELLNPVRVLYRGFSIVE-KDGRAVSRVKDVTAGDRVN 380 Query: 487 INFFDGQANAIVIN 500 I F DG+ +A+V Sbjct: 381 ITFADGKISAVVEQ 394 >gi|167758088|ref|ZP_02430215.1| hypothetical protein CLOSCI_00426 [Clostridium scindens ATCC 35704] gi|167663985|gb|EDS08115.1| hypothetical protein CLOSCI_00426 [Clostridium scindens ATCC 35704] Length = 403 Score = 283 bits (723), Expect = 6e-74, Method: Composition-based stats. Identities = 118/364 (32%), Positives = 193/364 (53%), Gaps = 13/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + Y+V +++ ++K++ + L+ + V+GE+S + H+SGH YFSLKD I + Sbjct: 1 MTRNVYTVKQVNAYIKNMFTQDYMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTIACV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G + F EG + +V+G + + S YQ+ + + G G L + KK+L Sbjct: 60 MFAGQRGGLSFRMSEGQQIVVLGSVNVYERSGSYQLYAKEIRLDGDGLLYERFQMLKKEL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 E G+F+ ++K PIP I V+T+PTGA +RDI+ R P +++I++P +VQG+ Sbjct: 120 EEMGMFAPEYKKPIPSFASRIGVVTAPTGAAVRDIMNIAGRRNPYVQLILYPAQVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I I L D++I+ RGGGSIEDLW FN+E + RAI S+P+ISA Sbjct: 180 KESIVRGIRMLEA-------YGVDVMIVGRGGGSIEDLWAFNEEEVARAIFECSVPVISA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+ADYAADLRAPTP+ AAE+AV +Q + R+N ++ + I+ Sbjct: 233 VGHETDTTIADYAADLRAPTPSAAAELAVYDYRQVQMGMQEYRLRMNRLLNQKIQVARLK 292 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L + L + RL + ++ +E + + +K + Sbjct: 293 LREYHTRLKYLHPRLKLQEQQQRLSEMEDRMKMLMEGKVRDARHRMALYVEVMKGLSPLQ 352 Query: 365 NIQK 368 + Sbjct: 353 KLSH 356 Score = 90.6 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 5/139 (3%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +Q Q + + Q R E ++ LH + ++ + ++ Sbjct: 265 RQVQMGMQEYRLRMNRLLNQKIQVARLKLREYHTRLKYLH-----PRLKLQEQQQRLSEM 319 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R++ ++ K++ +++ +++ + L GY ++ + I R + + Sbjct: 320 EDRMKMLMEGKVRDARHRMALYVEVMKGLSPLQKLSHGYAYVEGRDKKAIKSIRQVRNQD 379 Query: 484 RILINFFDGQANAIVINKA 502 R+ I DG A V + Sbjct: 380 RLSIYVTDGILQATVEDVK 398 >gi|331091279|ref|ZP_08340120.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 2_1_46FAA] gi|330404726|gb|EGG84265.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 2_1_46FAA] Length = 411 Score = 283 bits (723), Expect = 7e-74, Method: Composition-based stats. Identities = 132/397 (33%), Positives = 219/397 (55%), Gaps = 13/397 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSV +++ ++K++ + + + V+GE+S + H+SGH YFSLKD + I++ Sbjct: 2 RNVYSVKQVNSYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTLACIMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F EG + +V+G +TT+ KYQ+ + +I G+G L E KK+L E Sbjct: 61 AGQRAGLTFRMREGQQVIVLGSVTTYERDGKYQLYAKEIILDGAGLLYEKFEALKKELEE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F+ ++K PIPF K I ++T+PTGA IRDI+ S R P +++I++P VQG + + Sbjct: 121 MGMFAPEYKQPIPFYAKRIGIVTAPTGAAIRDIMNIASRRNPYVQLILYPALVQGKDASE 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I L D+II+ RGGGSIEDLW FN+E + RAI N ++PIISA+G Sbjct: 181 SIIKGIGMLEA-------KGVDLIIVGRGGGSIEDLWAFNEESVARAIFNCAVPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NT 306 HETD T+ADY ADLRAPTP+ AAE+AV L+ ++ + E +L + + + K Sbjct: 234 HETDTTIADYVADLRAPTPSAAAELAVTEYSRLEETMYDYEVQLKRNLRQFLAAKRLLLR 293 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 ++ L R +L + +++ ++ + R +F + +K+ + + Sbjct: 294 QYAIRMKYLQPYNRLREQRQQLINMEEKIQSLMQKKLDRAKYNFAVRLENMKALSPLQKL 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + ++ ++ + VKQ + L+ + K IL+ Sbjct: 354 NQGFGYVTDESGKTVKSVKQTEKGNTLKIQMKDGILY 390 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 56/135 (41%), Gaps = 2/135 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + +++ ++Q L L ++ + L Q NR+ + + +I Sbjct: 265 RLEETMYDYEVQLKRNLRQFLAAKRLLLRQYAIRMKYL--QPYNRLREQRQQLINMEEKI 322 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + ++ K+ + ++ +++ + L +G+ + D + + + + I Sbjct: 323 QSLMQKKLDRAKYNFAVRLENMKALSPLQKLNQGFGYVTDESGKTVKSVKQTEKGNTLKI 382 Query: 488 NFFDGQANAIVINKA 502 DG A V++KA Sbjct: 383 QMKDGILYAKVMDKA 397 >gi|251779136|ref|ZP_04822056.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083451|gb|EES49341.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 399 Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats. Identities = 125/376 (33%), Positives = 217/376 (57%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K +++++ +++ V+GEIS + HSSGH YFSLKDN+S+++ + Sbjct: 1 MKIKTLTVSDLTNYIKKVIDNDFILNNLSVKGEISNLKF-HSSGHIYFSLKDNNSKVNCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K + + E+G+E +V G+ + + + +Q+ + + G G L E K+KL Sbjct: 60 MFKSKASLLNIALEDGMEVMVKGRASIYTATGSFQLYCDEIKKEGQGELFIKFEALKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 + G F +++K IP K I V+TS TGAVIRDI+ R P + +I++P KVQGD+ Sbjct: 120 SKSGYFDEKYKKNIPMYAKRIGVVTSSTGAVIRDIINVTKRRNPLVDIILYPAKVQGDDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 KEI I N D+II+ RGGGSIE+LW+FN+E + + I NS +PIISA Sbjct: 180 YKEIIAGIEYFNK------KKNIDLIIVGRGGGSIEELWNFNEEELAKVIFNSKLPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RA TP+ AAE+AV + + + ++ L++ I + +K + Sbjct: 234 VGHEVDFTISDFVSDVRAATPSQAAEIAVSLLSDINQRIYDISKSLDDEIQKKLKDCKSR 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L S + L + + S +D+L L ++I I R+ + + N + ++ I Sbjct: 294 LESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPIK 353 Query: 365 NIQKNRQHILEKQQHI 380 + K I ++ +I Sbjct: 354 VLNKGYAIIEDENNNI 369 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + + + ++I + + KL R+ F + KIK + +L + Sbjct: 293 RLESNERILKLHSPMSKIVNSYLEVDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPI 352 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 L +GY I+D NNN I + L + I I+ DG Sbjct: 353 KVLNKGYAIIEDENNNIIKEISQLNEEKEISISLSDGNIK 392 >gi|187934773|ref|YP_001886593.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum B str. Eklund 17B] gi|226694643|sp|B2TRM8|EX7L_CLOBB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|187722926|gb|ACD24147.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum B str. Eklund 17B] Length = 399 Score = 282 bits (722), Expect = 8e-74, Method: Composition-based stats. Identities = 125/376 (33%), Positives = 215/376 (57%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K +++++ +++ V+GEIS + HSSGH YFSLKDN+S+++ + Sbjct: 1 MKIKTLTVSDLTNYIKKVIDNDFILNNLSVKGEISNLKF-HSSGHIYFSLKDNNSKVNCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K + + E+G+E +V G+ + + + +Q+ + + G G L E K+KL Sbjct: 60 MFKSKASLLNIALEDGMEVMVKGRASIYTATGSFQLYCDEIKKEGQGELFIKFEALKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 + G F +++K IP K I ++TS TGAVIRDI+ R + +I++P KVQGD Sbjct: 120 SKSGYFDEKYKKNIPMYAKRIGIVTSSTGAVIRDIINVTKRRNSLVDIILYPAKVQGDNA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 KEI I N DIII+ RGGGSIE+LW+FN+E + + I NS +PIISA Sbjct: 180 YKEIIAGIEYFNK------KKNIDIIIVGRGGGSIEELWNFNEEELAKVIFNSKLPIISA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D+RA TP+ AAE+AVP+ + + + + L+ I + +K + Sbjct: 234 VGHEVDFTISDFVSDVRAATPSQAAEIAVPLLSDINTRIYEISKSLDYEIQKKLKDCKSR 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L S + L + + S +D+L L ++I I R+ + + N + ++ I Sbjct: 294 LESNERILKLHSPISKIVNSYLEIDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPIK 353 Query: 365 NIQKNRQHILEKQQHI 380 + K I ++ +I Sbjct: 354 VLNKGYAIIEDENNNI 369 Score = 87.5 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 40/100 (40%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + + + ++I + I KL R+ F + KIK + +L + Sbjct: 293 RLESNERILKLHSPISKIVNSYLEIDKLKDRLYFAIDIKIKREKQKIESLNNLLSANNPI 352 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 L +GY I+D NNN I + L + I ++ DG Sbjct: 353 KVLNKGYAIIEDENNNIIKEISQLNEEKEISVSLSDGNIK 392 >gi|284800113|ref|ZP_06390542.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703] gi|284795977|gb|EFC51324.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703] Length = 310 Score = 282 bits (722), Expect = 8e-74, Method: Composition-based stats. Identities = 114/321 (35%), Positives = 179/321 (55%), Gaps = 13/321 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ +S+ SVSEL+ K ++E +L+ + + GE+S +SGH YFSLKD+ Sbjct: 1 MSELFAPSSI-----SVSELNALAKALLEDHLAGLWIAGEVSNLT-RAASGHYYFSLKDS 54 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ ++KG ++ +EG V G+I+ + ++QI + + G G L A Sbjct: 55 RAQVRCAMFKGAAMRLAKPLKEGDHIEVSGRISIYEARGEFQITVNEVRLKGLGQLYEAY 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K +L EG FS + K P+P P+ I ++TS A +RD++ ++ R P + VI++P Sbjct: 115 ERLKAQLQAEGAFSAERKKPLPARPQCIGIVTSLAAAALRDVVTTLNRRAPEIPVIVYPT 174 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +IA AI + E D++I+ RGGGSIEDLW FN+E +VRAI Sbjct: 175 PVQGTGSELQIAQAIKTASQRAE------CDVLIVCRGGGSIEDLWAFNEEPVVRAIEAC 228 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +IP++S +GHETD+TLAD+ AD+RAPTPTGAAE+ P ++ L + RL + Sbjct: 229 AIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQAQGRLKTVFGAT 288 Query: 300 IKYKINTLNSLLKALPNSDQT 320 + + A P+ Sbjct: 289 LFRCQPKTRLVGAANPSPAPK 309 >gi|194334664|ref|YP_002016524.1| exodeoxyribonuclease VII large subunit [Prosthecochloris aestuarii DSM 271] gi|194312482|gb|ACF46877.1| exodeoxyribonuclease VII, large subunit [Prosthecochloris aestuarii DSM 271] Length = 411 Score = 282 bits (722), Expect = 8e-74, Method: Composition-based stats. Identities = 133/349 (38%), Positives = 201/349 (57%), Gaps = 6/349 (1%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SVSEL+ ++K+ +ES V VRGEIS +R + +SGH Y +LKD ++I A+IWK Sbjct: 2 QQILSVSELTLNIKNRLESAFPTVTVRGEISNFR-LPASGHIYMTLKDEDAQIPAVIWKN 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ +G+E + G++ +P S +YQ+I SL +G G L A +KL G Sbjct: 61 VRLRLPAELRDGMEIIAAGRLEVYPPSGRYQLICTSLTLAGEGMLQQAFAMLLQKLAAAG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 F+ +HK P+P P+ IA++TSPTGAVI+D+ +S RFP ++++PVKVQG+ I Sbjct: 121 YFNVEHKKPLPAYPETIALVTSPTGAVIKDMGDVLSRRFPAASLLLYPVKVQGEGAVNNI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +A+ NT + RPD+II+ARGGGS+EDL FN+E + AI +SSIP+ISA+GHE Sbjct: 181 IDALEYFNTTTVDQ--HRPDLIIVARGGGSLEDLQAFNEERVAMAIFHSSIPVISAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN-- 308 TD+T+AD AD+RA TP+ AAE+AVP KE L + L R + + I ++ Sbjct: 239 TDFTIADMVADVRAGTPSIAAEIAVPDKEELLQKINTLAQRQLSSLNTRIDGAEREIDSL 298 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + A + + + +L+ I + F+ R+ Sbjct: 299 TGSYAFNRPKVLCKQLDAEITTIIGFMSRSLKGRIEHIEQRFSAAEGRL 347 Score = 64.8 bits (156), Expect = 3e-08, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 3/127 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRI 427 ++ +L+K + Q L + +I L + K L I +I + Sbjct: 266 KEELLQKINTLAQRQLSSLNTRIDGAEREIDSLTGSYAFNRPKVLCKQLDAEITTIIGFM 325 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L +I+ S L Y+N L+RG+ I+ + +IT R++A K R Sbjct: 326 SRSLKGRIEHIEQRFSAAEGRLSLLDYRNVLRRGFALIKTESG-YITTSRDMARKKRASA 384 Query: 488 NFFDGQA 494 F+DG+ Sbjct: 385 VFYDGEI 391 >gi|325265402|ref|ZP_08132126.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. D5] gi|324029403|gb|EGB90694.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. D5] Length = 406 Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats. Identities = 114/362 (31%), Positives = 203/362 (56%), Gaps = 13/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 Y+V +++ ++K++ + + + V+GE+S + H+SGH YFSLKD + +++ Sbjct: 2 RNVYTVKQVNAYIKNMFTQDFMLNRIYVKGEVSNCK-YHTSGHIYFSLKDESGTMACVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G+ + + F +EG + +V+G ++ + +YQ+ + +I G+G L E K++L E Sbjct: 61 AGSRSGLSFRMQEGQQVIVLGSVSVYERDGRYQLYAKEIILDGAGLLYEKFEALKRELQE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F+ ++K PIP + + ++T+PTGA +RDI+ + R P +++I++P +VQG+ Sbjct: 121 MGMFAREYKQPIPAYVRTVGIVTAPTGAAVRDIINIATRRNPYVQLILYPAQVQGEGAAA 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I E D++I+ RGGGSIEDLW FN+E + RA+ + +P+ISA+G Sbjct: 181 SIVRGI-------ETLEKKGVDVMIVGRGGGSIEDLWAFNEEEVARAVFHCRVPVISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI--NT 306 HETD T+ DY ADLRAPTP+ AAE+AV ++ EARL +++ I + + Sbjct: 234 HETDTTITDYVADLRAPTPSAAAELAVYEYLGTAGAMREYEARLRRSMMQRISQERVNSR 293 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 ++ L + Q L R R L + L +E + ++ F + ++K + + Sbjct: 294 QAAMKLKLAHPRQKLLEKRQRAVDLEQRLRILMEGCLEKRRHQFAIYVEQMKGLSPLAKL 353 Query: 367 QK 368 + Sbjct: 354 NQ 355 Score = 98.3 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 48/139 (34%), Gaps = 2/139 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + E + + + + Q + + ++ A + + + ++ L R+ ++ Sbjct: 270 MREYEARLRRSMMQRISQERVNSRQ--AAMKLKLAHPRQKLLEKRQRAVDLEQRLRILME 327 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 ++ +I ++ + L +GY+ +Q I R + I + DG Sbjct: 328 GCLEKRRHQFAIYVEQMKGLSPLAKLNQGYSYVQGDRGINIKSVRQVKQGDSIRVYMTDG 387 Query: 493 QANAIVINKAPPKEQPTKK 511 A V + ++ Sbjct: 388 SVQAEVREIEEEPDGRKEE 406 >gi|330838908|ref|YP_004413488.1| Exodeoxyribonuclease 7 large subunit [Selenomonas sputigena ATCC 35185] gi|329746672|gb|AEC00029.1| Exodeoxyribonuclease 7 large subunit [Selenomonas sputigena ATCC 35185] Length = 400 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 131/358 (36%), Positives = 202/358 (56%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHI--VESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS L+ ++K + VE L +V V GE+S Y+ +SGH YF+LKD + + +++K Sbjct: 5 SVSALTQYIKSMFQVEGLLRNVSVEGELSNYKMY-ASGHCYFTLKDETASLKGVMFKSRA 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ + G+++ + YQ+ +E L+P G+G L A E+ K +L EGLF Sbjct: 64 RLLRFQPENGMKVVATGEVSVYERDGVYQLYVERLLPVGAGELSVAFEQLKARLAAEGLF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIAN 192 ++ HK P+P P+ I ++TS +GAV+RDI + R +R++++P VQG+ EIA Sbjct: 124 NEDHKKPLPPFPRTIGIVTSLSGAVLRDIYRVSKRRDANIRLVLYPTLVQGEGAAAEIAA 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N D++I+ RGGGS EDLW FN+E +VRAI +S IP+ISA+GHETD Sbjct: 184 AIRFFNEKYP------VDLLIVGRGGGSAEDLWAFNEEPVVRAIYDSVIPVISAVGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL+DYA+D+RA TP+ AAE+AVP L + E RL + + Y+ + L Sbjct: 238 TTLSDYASDVRAATPSQAAELAVPETAALFRRIGECEMRLQKAVKSRLYYERERVERLGG 297 Query: 313 AL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L+ R RLD L+ + + K F +++ +H I++ Sbjct: 298 FFLKRPPQALLADRRQRLDMAAEALDRGMRRALLEKQHAFRVAAEKLEMLNPLHVIRR 355 Score = 98.3 bits (243), Expect = 2e-18, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 3/130 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I E + +++ VK L Y + L+ + + + ++ Sbjct: 268 RRIGECEMRLQKAVKSRLYYERERVERLGG--FFLKRPPQALLADRRQRLDMAAEALDRG 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + + L+ + ++RGY+ ++ + + + LA IL+ Sbjct: 326 MRRALLEKQHAFRVAAEKLEMLNPLHVIRRGYSVVE-KDGAAVRSVKELAAGDGILVRLA 384 Query: 491 DGQANAIVIN 500 DG +A+V Sbjct: 385 DGSFDAVVGG 394 >gi|307718646|ref|YP_003874178.1| exodeoxyribonuclease VII large subunit [Spirochaeta thermophila DSM 6192] gi|306532371|gb|ADN01905.1| exodeoxyribonuclease VII, large subunit [Spirochaeta thermophila DSM 6192] Length = 418 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 121/374 (32%), Positives = 188/374 (50%), Gaps = 10/374 (2%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S+ +SVSEL+ +K +E +V V+GEIS R S+GH YFSLKD + ++ ++ Sbjct: 2 SIPQKVFSVSELTSLIKGYLEDAFPYVAVQGEISNCR-PSSTGHLYFSLKDERAVLNVVM 60 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++ F P++G+ L G ++ + YQ++ E L G G +L LEKRK++L Sbjct: 61 FQSRYRRLSFQPKDGMMVLAKGALSVYEARGAYQLVCEELEQVGMGAILEMLEKRKQRLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187 EGLF + K PIP P IAV+TSPTGA IRDI+ ++ R + +++ P VQG+ Sbjct: 121 AEGLFDKERKRPIPLFPSRIAVVTSPTGAAIRDIINVLTRRNAGVDIVVVPAPVQGENAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 IA I + D+II+ARGGGSIEDL F++E++VRAIA P+ISA+ Sbjct: 181 PIIAEQIRR------ADLWRLGDVIIVARGGGSIEDLLPFSEEVVVRAIAACETPVISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D++L+D AADLRAPTP+ AAEM +E L + + + L + Sbjct: 235 GHEIDYSLSDLAADLRAPTPSAAAEMVSAHREELLQRVQHAHLTVVRETRGLCERLRFRL 294 Query: 307 LNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L R D + + + + ++ Sbjct: 295 GKVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMRKYLITLRHRIEMAREITQAHSPRAV 354 Query: 366 IQKNRQHILEKQQH 379 + + + + Sbjct: 355 LSRGYAIVRDAATR 368 Score = 87.1 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 56/174 (32%), Gaps = 6/174 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + +++ + H E Q ++ +R + L Sbjct: 236 HEIDYSLSDLAADLRAPTPSAAAEMVSAHREELLQRVQHAHLTVVRETRGLCERLRFRLG 295 Query: 404 MLREQTKNRIFYLH-----THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + E+ R+F L+ + I + + + + + I Q+ + + L Sbjct: 296 KVSEEQLARLFTLYRAPYLQRWDEAHQSIVRTMRKYLITLRHRIEMAREITQAHSPRAVL 355 Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511 RGY ++D + R R+ I G+ A APP+++ Sbjct: 356 SRGYAIVRDAATREILRDTRTAFEGQRLSITLARGELEARTTQVAPPEDESATT 409 >gi|153941308|ref|YP_001391207.1| exodeoxyribonuclease VII large subunit [Clostridium botulinum F str. Langeland] gi|166232354|sp|A7GEJ7|EX7L_CLOBL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|152937204|gb|ABS42702.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum F str. Langeland] gi|295319243|gb|ADF99620.1| exodeoxyribonuclease VII, large subunit [Clostridium botulinum F str. 230613] Length = 401 Score = 282 bits (721), Expect = 1e-73, Method: Composition-based stats. Identities = 127/376 (33%), Positives = 219/376 (58%), Gaps = 12/376 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+L+ ++K+ ++++ ++ V+GEIS + IHSSGH YFSLKD S+I+ + Sbjct: 1 MHIKTLTVSQLNRYVKNTLDADFILNNASVKGEISNLK-IHSSGHIYFSLKDGGSKINCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K ++F PE G++ + +G ++ + YQ+ ++ + G G L A EK K+KL Sbjct: 60 MFKSYAYNLKFAPENGMDVVALGNVSVYEKEGSYQLYVKDMKREGIGDLYVAFEKLKEKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EE LF D HK IP K + VITSPTGA ++DI+ R + ++I+P VQG + Sbjct: 120 KEEELFDDVHKKEIPKFSKKVGVITSPTGAALKDIINVTKRRNKGIELLIYPALVQGTDA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + I LN +++ DIIILARGGGSIE+LW FN+E + A+ NS PII+ Sbjct: 180 SRTLIEGIKILNKVED------VDIIILARGGGSIEELWAFNNEELAYAVYNSKKPIITG 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+AV +E L + ++N + + N + +IK K N Sbjct: 234 VGHETDFTIVDFVSDRRAPTPSAAAEIAVFDREVLINEILNYKYNIKNYMENIIKEKRNY 293 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN + + + + +D L L +E + ++ + + + + +++ ++ Sbjct: 294 LNLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLN 353 Query: 365 NIQKNRQHILEKQQHI 380 ++K I ++ ++ Sbjct: 354 VLKKGYTLIEDEGNNL 369 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 46/101 (45%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + N I + +I L + + K+ ++S + +L++ N Sbjct: 295 NLYKQKIEANSPTNIIVNEYKNIDNLKELLNMKIEGKLNKEKNNLSRLSSLLEAHNPLNV 354 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 LK+GYT I+D NN IT+K L +I I F DG+A + Sbjct: 355 LKKGYTLIEDEGNNLITEKEALKKLNKINIIFKDGRAKLSI 395 >gi|291545447|emb|CBL18555.1| exodeoxyribonuclease VII, large subunit [Ruminococcus sp. SR1/5] Length = 383 Score = 282 bits (720), Expect = 2e-73, Method: Composition-based stats. Identities = 113/360 (31%), Positives = 183/360 (50%), Gaps = 13/360 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSV ++++++K++ + L V V+GE+S + H+SGH YFSLKD + +++ Sbjct: 2 RNVYSVGQVNHYVKNMFTQDYFLRKVYVKGEVSNCK-YHTSGHIYFSLKDETGTLSCVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F ++G + + G + + +YQ+ + + G+G L K++L + Sbjct: 61 AGHRRGLAFRMKDGDKVVAGGIVDVYERDGRYQLYAKEITLEGAGALYERYLALKQELED 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F+ ++K PIP + V+T+PTGA ++DI R P L+VI++P VQG+ + Sbjct: 121 MGMFAQEYKQPIPHFIHTLGVVTAPTGAAVQDIRNIAGRRNPYLQVILYPALVQGEGAAQ 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I L+ D+II+ RGGGSIEDLW FN+E + RAI P+ISA+G Sbjct: 181 SIVKGIRMLDEA-------GVDVIIVGRGGGSIEDLWAFNEESVARAIFECRTPVISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD+ ADLRAPTP+ AAE+AV + S RL + + L Sbjct: 234 HETDFTIADFVADLRAPTPSAAAELAVDDFRSVLESFHMYGDRLQRAMNSKTELFAAKLK 293 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + + L R L L ++E + K I R + + + Sbjct: 294 AYENRFQYLSPESMLREKRQYASELEECLRSSMEQKLTEKRHELAIWIQRFEGLSPLRKL 353 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 10/111 (9%), Positives = 34/111 (30%), Gaps = 2/111 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + +++ + + K L ++ + + +L + Sbjct: 268 ESFHMYGDRLQRAMNSKTELFAAKLKAYENRFQYL--SPESMLREKRQYASELEECLRSS 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + K+ ++I + + + L GY + D + +T+ + Sbjct: 326 MEQKLTEKRHELAIWIQRFEGLSPLRKLNGGYAFVSDLGGHAVTEISQIKK 376 >gi|241765692|ref|ZP_04763641.1| exodeoxyribonuclease VII, large subunit [Acidovorax delafieldii 2AN] gi|241364440|gb|EER59548.1| exodeoxyribonuclease VII, large subunit [Acidovorax delafieldii 2AN] Length = 441 Score = 282 bits (720), Expect = 2e-73, Method: Composition-based stats. Identities = 111/387 (28%), Positives = 194/387 (50%), Gaps = 11/387 (2%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + V L + +E+ + V VRGEI+G+ SSGH YFS+KD + ++ Sbjct: 5 PTPATTPRVWEVGALCRAIADALEARFNPVAVRGEITGF-SRASSGHCYFSVKDANGQLR 63 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ + ++F P +G + G+I + Q I+ES+ +G G L + K Sbjct: 64 CAMFRRAASLLDFSPRDGELVELRGRIGVYEARGDLQFIVESMQRAGQGALFEQFLRLKA 123 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF K P+P P+ I ++TSP A + D++ + R P + V++ P VQG Sbjct: 124 QLEAEGLFDAARKRPLPLQPRGIGLVTSPGAAALHDVVTALRRRVPHIPVVLVPALVQGA 183 Query: 185 ECPKEIANAILQLNTLKEGR--------TCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 P+ I A+ +L + + + P D+I+L RGGG++EDLW FNDE + R + Sbjct: 184 AAPQSIVAALSKLYQMAQAGLAHGADLASNPAIDVILLVRGGGAMEDLWAFNDEQVARTV 243 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 S +P++ +GHETD+T+AD+ ADLRAPTPT AAE+ +E +L L RL + + Sbjct: 244 VQSPVPLVCGVGHETDFTIADFCADLRAPTPTAAAELVAQPREVWLGALGLLAGRLADGL 303 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 R I + L+ L ++ + +L RL + + H + + + + + Sbjct: 304 QRQIDARCQRLDQAAARLGRPSGIVARQQMQLARLAQRMRHGVLLKMQQLAHTQQALEGD 363 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQI 383 + + + + + + +E + Sbjct: 364 LPAKV-QRRLALHAERLERAALRLELL 389 >gi|45358295|ref|NP_987852.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis S2] gi|44921053|emb|CAF30288.1| Exonuclease VII, large subunit:OB-fold nucleic acid binding domain [Methanococcus maripaludis S2] Length = 407 Score = 281 bits (719), Expect = 2e-73, Method: Composition-based stats. Identities = 132/377 (35%), Positives = 216/377 (57%), Gaps = 12/377 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S +VSEL+ ++K +E + C++GEIS +H SGH YF+LKD +S ID Sbjct: 8 SSFSNTLTVSELNSYVKSTLEEDFLLKRACIKGEISNCT-LHKSGHVYFTLKDENSAIDC 66 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++K K++F P EG+ ++ GK++ + + KYQ + G G L +K K+K Sbjct: 67 VMFKPYTKKLDFSPAEGMSVIIKGKVSLYTKTGKYQFYCNEMEKEGLGDLFIKFKKLKEK 126 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 L EGLF++++K IP PK I +ITSPTGA IRDI++ R + +II+P VQG+ Sbjct: 127 LESEGLFNEEYKQKIPKYPKNIGIITSPTGAAIRDIIKVTRNRNSSVNLIIYPAVVQGES 186 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K + + I +LN L + D+II+ARGGGS+EDLW FN+E + RAI S P+I+ Sbjct: 187 AAKTVISGISELNKL------EKIDLIIIARGGGSMEDLWCFNNESLARAIFESKKPVIT 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHETD+T++D+ +DLRA TP+ AAE+A+ + L+S + NLE L N + I + Sbjct: 241 GIGHETDFTISDFVSDLRAATPSNAAEIAIYNEYELKSMINNLERMLKNRMKTEISNRSY 300 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L + + + + +D++ ++ H ++ I + + F + + + + Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKVHVDKIRAQMNHEIKNKISYEVKRFEKSYSLLNAYNPL 360 Query: 364 HNIQKNRQHILEKQQHI 380 + + K I ++ + I Sbjct: 361 NVLNKGYSIIQDENEKI 377 Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 61/133 (45%), Gaps = 2/133 (1%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITR 426 N + ++E+++K ++ + ++ IL+ + + K++I H+ K+ + Sbjct: 272 NEYELKSMINNLERMLKNRMKTEISNRSYELDILYSKIEKNSPKSKIEKQKVHVDKIRAQ 331 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + +KI + +L ++ N L +GY+ IQD N I+ K +L + + Sbjct: 332 MNHEIKNKISYEVKRFEKSYSLLNAYNPLNVLNKGYSIIQDENEKIISSKSSLNLENDVK 391 Query: 487 INFFDGQANAIVI 499 I DG +A + Sbjct: 392 ITLKDGTVDAHIT 404 >gi|291519196|emb|CBK74417.1| exodeoxyribonuclease VII, large subunit [Butyrivibrio fibrisolvens 16/4] Length = 405 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 109/364 (29%), Positives = 186/364 (51%), Gaps = 14/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ YSVS+++ +++ + + ++ + GE+S + H+ GH YF+LKD+ + I + Sbjct: 1 MNKNVYSVSQVNTYIERMFSDDFMLGNLSLSGEVSNCKYNHT-GHIYFTLKDDKAAISCV 59 Query: 68 IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ G + F ++G + +V G + + YQ+ + G G L E K + Sbjct: 60 MFAGKRAKGLRFQMKDGDQIVVTGYVGVYKPYGTYQVYANEIELQGVGDLYQRFEALKAE 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L E G+F +K P+P I V+T+PTGA + DI++ R P + +I++P +VQG+ Sbjct: 120 LEESGMFDAMYKKPLPTHAMKIGVVTAPTGAAVHDIIRVSKTRNPYVSIILYPAQVQGEG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 + + I L+ + D+II+ RGGGSIEDLW FN+E + RAI N++ PIIS Sbjct: 180 AVPSVVSGIQCLDEM-------DLDVIIVGRGGGSIEDLWAFNEEAVARAIFNANTPIIS 232 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHETD T+AD+ AD RA TP+ AAE+A V + + L +L + I+ Sbjct: 233 AVGHETDVTIADFVADRRAATPSQAAELANFVYQDFANQLSRYSDKLERNLDFKIQAYQE 292 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + L + + + RL L L++ + I + R + R+ Sbjct: 293 RLMGFRQQLQLLRPENKIKANEERLKNLSMRLDNLIHIKLDRYENRLVALSGRLDGLSPA 352 Query: 364 HNIQ 367 + Sbjct: 353 KKLA 356 Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 2/129 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + +E+ + ++ L +LR +N+I +K L R++ ++ Sbjct: 271 QLSRYSDKLERNLDFKIQAYQERLMGFRQQLQLLR--PENKIKANEERLKNLSMRLDNLI 328 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 K+ + + L + L G+ I D + +++ I I D Sbjct: 329 HIKLDRYENRLVALSGRLDGLSPAKKLAAGFGYITDGAGKRVDTVSSISVGDSINIRIKD 388 Query: 492 GQANAIVIN 500 G+ V + Sbjct: 389 GELITQVTD 397 >gi|330950773|gb|EGH51033.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae Cit 7] Length = 293 Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 109/287 (37%), Positives = 173/287 (60%), Gaps = 10/287 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 16 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 74 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 134 ALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E +I A+ ++ D +ILARGGGS+EDLW FN+E + RAI Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGGSLEDLWCFNEEAVARAIDACV 246 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P L + + Sbjct: 247 TPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDH 293 >gi|32267231|ref|NP_861263.1| exodeoxyribonuclease VII large subunit [Helicobacter hepaticus ATCC 51449] gi|81835911|sp|Q7VFE5|EX7L_HELHP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|32263284|gb|AAP78329.1| exonuclease VII [Helicobacter hepaticus ATCC 51449] Length = 417 Score = 281 bits (718), Expect = 3e-73, Method: Composition-based stats. Identities = 122/419 (29%), Positives = 206/419 (49%), Gaps = 10/419 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 VSE++ +K I+ES +CVRGEIS IH+SGH Y +LKD S + +++KG Sbjct: 4 LEVSEINAQIKSILESTFMDICVRGEISNVT-IHTSGHIYLTLKDESSSVRCVMFKGNAR 62 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ E G L++G ++ + +YQI+ +S+ +G G L A E K KL +G F Sbjct: 63 NLKIKLEVGQSVLIMGSLSVYVPKGEYQILCKSITLAGLGELSQAYEALKTKLGAKGYFE 122 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 HK P+P PK IA++TS TGA D+L+ R+ + + +F VQG+ I Sbjct: 123 SAHKKPLPRFPKRIALLTSATGAAKEDMLKVAHKRWNLVHITLFNTLVQGEGAKDSIVEN 182 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + ++ T D+I+L RGGGS+ED+W FN+E + AI ++ PIISA+GHE D Sbjct: 183 LKRADSFF--GTSESFDVIVLGRGGGSMEDMWAFNEECVADAIYSARTPIISAVGHEVDV 240 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD+RAPTP+ A E+ +P K L + + + K L + + Sbjct: 241 FISDFVADVRAPTPSAAMEILLPDKNEYLRVLDEIMNSYFYALKQQFVLKSQALERMREY 300 Query: 314 --LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL--IHNIQKN 369 L N +Q +++ + + ++ ++ K + HI + + + Q Sbjct: 301 FKLYNFEQRYCAKVEQINIFQQMMRDSMNAVLEDKMLKYEHIFLSLNARCEEKLQQCQYE 360 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + +LE + Y + K+ K L + + + + I L R++ Sbjct: 361 YERMLEVFNALNPHSLSTRGYAQISKEGKPCRLSDIDINEEFYLSDMTHSI--LAKRLQ 417 >gi|15644887|ref|NP_207057.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 26695] gi|14194710|sp|O25039|EX7L_HELPY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|2313353|gb|AAD07327.1| exonuclease VII, large subunit (xseA) [Helicobacter pylori 26695] Length = 420 Score = 281 bits (718), Expect = 3e-73, Method: Composition-based stats. Identities = 122/419 (29%), Positives = 203/419 (48%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I+ ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIVYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L+ Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLVA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + + TR + Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGALVSKNNQAIELEALKRGDKIELSNEKTRASAEI 414 >gi|332298471|ref|YP_004440393.1| Exodeoxyribonuclease 7 large subunit [Treponema brennaborense DSM 12168] gi|332181574|gb|AEE17262.1| Exodeoxyribonuclease 7 large subunit [Treponema brennaborense DSM 12168] Length = 408 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 13/346 (3%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +SVSEL+ +K ++E + V + GEIS R S+GH YF+LKD + I A+++KG + Sbjct: 16 FSVSELTGIIKEMLEGSFPFVHIEGEISNCR-PASTGHLYFTLKDAGAAISAVMFKGKMK 74 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + F P +G V G I+ + YQI++ES+ +G+G +L LE+RK++L EGLF Sbjct: 75 SLTFAPADGTLVRVKGSISVYALRGNYQIVVESMELAGTGNILQMLEERKRRLAAEGLFD 134 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K P+PF P+ I V+TSPTGA +RDILQ R P + V + P VQG + + I Sbjct: 135 SRRKRPLPFFPQTIGVVTSPTGAALRDILQITRRRNPKVSVTVLPCAVQGSDAAQAIVRM 194 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N D++I+ RGGGS+EDL F++E +VRA+A S IPI+SA+GHE DW Sbjct: 195 IETANA------YRLADVLIVGRGGGSLEDLLPFSEESVVRAVAASEIPIVSAVGHEIDW 248 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D+AAD+RAPTP+ AAE+ P+ L + + ++ + + + ++ + S Sbjct: 249 ALSDFAADVRAPTPSAAAELVTPLLTDLYAGIDRIKRDVYHTVETRLERMRLLVRSFT-- 306 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + R L + + E ++ + + RI + Sbjct: 307 ---PESLELRFRTIEQPLLADFDDAKEALLGNMQCKCDELRRRITA 349 Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 15/163 (9%), Positives = 46/163 (28%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE-KIAIL 402 + +++ + + + I++I + + + ++ + Sbjct: 244 HEIDWALSDFAADVRAPTPSAAAELVTPLLTDLYAGIDRIKRDVYHTVETRLERMRLLVR 303 Query: 403 HMLREQTKNRIFYLHT----HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 E + R + + + K ++ R L+ L Sbjct: 304 SFTPESLELRFRTIEQPLLADFDDAKEALLGNMQCKCDELRRRITAAVRDLEGANPSAIL 363 Query: 459 KRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVIN 500 RGY+ +++ + + + A + I G+ V Sbjct: 364 ARGYSMVRNPHTGAVVRSPADTAIGQTLEIIPASGRITVSVTG 406 >gi|217031476|ref|ZP_03436981.1| hypothetical protein HPB128_21g34 [Helicobacter pylori B128] gi|298736795|ref|YP_003729325.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori B8] gi|216946676|gb|EEC25272.1| hypothetical protein HPB128_21g34 [Helicobacter pylori B128] gi|298355989|emb|CBI66861.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori B8] Length = 420 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 197/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G ++ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGVSVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 ++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I L + + Sbjct: 301 SLKRLS--FENKHHLNTLKLEKLKIALENKTLEFLRFKKTLLEKISIQALTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + R + Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFVSKNHQAVELEALKRGDKIELSNEKARASATI 414 >gi|94986849|ref|YP_594782.1| exonuclease VII, large subunit [Lawsonia intracellularis PHE/MN1-00] gi|94731098|emb|CAJ54460.1| Exonuclease VII, large subunit [Lawsonia intracellularis PHE/MN1-00] Length = 480 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 135/510 (26%), Positives = 220/510 (43%), Gaps = 57/510 (11%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV EL+Y +K+ VE+ L +V V+GE++ Y +SGH YFSLKDN S + + + Sbjct: 4 ILSVQELTYKIKYAVETLLPYVWVKGEVTNY-SCPTSGHIYFSLKDNESYLHCVWFNSMQ 62 Query: 74 N-------------------KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 + G + + G I +P YQ++++ G G Sbjct: 63 RETETFDPLTGEVFQNGPRLSLAKTITNGQKIICAGTIGVYPPKGGYQLLVDFAQSEGVG 122 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR- 173 +ALEKRK +L ++G F K IP PK I VITSP GA I+D L+ R + Sbjct: 123 EWYSALEKRKNELQQQGYFDLSRKQIIPHNPKKIVVITSPAGAAIQDFLRIAKERGTEKY 182 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 + I+PV VQG+E +IA AI N ++I+L RGGG+ +DL FND+ ++ Sbjct: 183 IRIYPVTVQGEESIHQIAQAIHTENNSNWA------EVIVLIRGGGASQDLMVFNDQQLI 236 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 AI S IPI++ IGHE+D + A+ ADLRA TP+ AA++ + L+ + ++E L Sbjct: 237 DAIYTSKIPILAGIGHESDISFAELTADLRAATPSHAAQLLWSERTQLKQQVHDMEIALT 296 Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 ++ N L L R + L + IF ++ Sbjct: 297 KAAHFQLQKIQYVFNKLNTTLQWLSPLKKLER---NELQLNSIYEKLNAIFNYKLKLKNL 353 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + ++I K + E+ +++ + +++ I L KK+ L Sbjct: 354 DLIQYTQLPSYSIVKKISYYKEQLSFLQRKLYRYIHSILLTKKQNTNNNKQLL------- 406 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI---LQSFAYKNTLKRGYTSIQDTNN 470 +++ + + ++ L+ LKRGY I N Sbjct: 407 -----------------INNFFQKYQQLLYNYEKLHVTLKMLNPHLLLKRGYALIYLPNG 449 Query: 471 NFITQKRNLATKTRILINFFDGQANAIVIN 500 + + +T + I DG + VI+ Sbjct: 450 QILHSIQEAPEQTILTIKLPDGLLSVKVIS 479 >gi|308184064|ref|YP_003928197.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori SJM180] gi|308059984|gb|ADO01880.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori SJM180] Length = 420 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 123/390 (31%), Positives = 196/390 (50%), Gaps = 6/390 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 ++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPICELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVMARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300 Query: 313 ALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 +L + + +L++L LE+ + K I ++ S + R Sbjct: 301 SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQL-STSPFLQTKTER 359 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + LE + + ++ L K A Sbjct: 360 LNRLENALKLAYANLKLPQFGALVSKNDQA 389 >gi|302392486|ref|YP_003828306.1| exodeoxyribonuclease VII, large subunit [Acetohalobium arabaticum DSM 5501] gi|302204563|gb|ADL13241.1| exodeoxyribonuclease VII, large subunit [Acetohalobium arabaticum DSM 5501] Length = 406 Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats. Identities = 121/358 (33%), Positives = 207/358 (57%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V+EL+ ++K +E++ L+++ + GEIS + HSSGH YF+LKD++SR+ +++++ Sbjct: 2 TVTELTKYIKRRLETDDLLNNLLITGEISNF-HHHSSGHMYFTLKDDNSRLKSVMFRSAN 60 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F PE+G+E + G ++ + +YQ+ ++ L P G G L A E+ K++L ++GLF Sbjct: 61 QNLKFQPEDGMEVIASGYVSLYESRGQYQLYVQDLQPEGIGALHIAFEQLKEELQKKGLF 120 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 + +HK +P P+ + VITSPTGA IRDIL I RF + V++ P VQGD+ + Sbjct: 121 AVEHKQELPQFPQKVGVITSPTGAAIRDILSVIQRRFRGVSVLVAPATVQGDKAASTLVG 180 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ LN + D+II+ RGGGSIEDLW FN+E + RAI +S P++SA+GHETD Sbjct: 181 ALEILNQQSD------VDVIIIGRGGGSIEDLWPFNEEEVARAIFSSQTPVVSAVGHETD 234 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNSL 310 +T++D+ AD+RAPTP+ A E+ V ++ + + L L I + + N Sbjct: 235 YTISDFVADVRAPTPSAAGELVVSNQKEVNRYVKGLTDSLVQNIEQKLSDCRNQLVNLME 294 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + L + R+D L L + +E + ++ + ++ + + Sbjct: 295 RRVFLQPKRQLKDRKQRIDELEERLINLMERRLNLAQERLQSKAGKLDTLSPLNILSR 352 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 49/127 (38%), Gaps = 2/127 (1%) Query: 381 EQIVKQHLRYIFLEKKEKIAILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + +V+ + + + + + ++ Q K ++ I +L R+ ++ ++ Sbjct: 272 DSLVQNIEQKLSDCRNQLVNLMERRVFLQPKRQLKDRKQRIDELEERLINLMERRLNLAQ 331 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNN-FITQKRNLATKTRILINFFDGQANAIV 498 + L + + N L RGY+ + + ++ + ++ I DG+ V Sbjct: 332 ERLQSKAGKLDTLSPLNILSRGYSYCRKRDKKESLSSVSEIKPGDKLEIFLSDGKLEIEV 391 Query: 499 INKAPPK 505 +N K Sbjct: 392 MNIKKGK 398 >gi|20807743|ref|NP_622914.1| exonuclease VII large subunit [Thermoanaerobacter tengcongensis MB4] gi|22095660|sp|Q8RAC9|EX7L_THETN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|20516296|gb|AAM24518.1| Exonuclease VII large subunit [Thermoanaerobacter tengcongensis MB4] Length = 404 Score = 280 bits (716), Expect = 4e-73, Method: Composition-based stats. Identities = 130/375 (34%), Positives = 211/375 (56%), Gaps = 13/375 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +SVSE++ ++K +++++ L +V VRGEIS + S YF+LKD + + + Sbjct: 1 MQLKAFSVSEVTEYIKKVMDNDIILRNVRVRGEISNLKYH--STAVYFTLKDEGAALKCV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ +EF ++G+ + G+IT + YQ+ ++S+ G G L A K K+KL Sbjct: 59 MFNDYSRSLEFTLQDGMSVIATGRITVYEKGGLYQLYVQSVQMDGIGALYIAFNKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K PIP P+ IAV+TSPTGAVIRDI+ R P + +++ PV VQG Sbjct: 119 QKEGLFDLDKKKPIPKHPRKIAVVTSPTGAVIRDIITISRRRNPTVDIMVVPVLVQGSSA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI+NA+ LN K+ D+II+ARGGGS+E++W FN+E + R+I S IP++SA Sbjct: 179 ADEISNALRILNKRKD------IDVIIVARGGGSLEEIWPFNEEKVARSIFASRIPVVSA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+AD+ ADLRAPTP+ AAE+ VP + Q L L+ ++ N++ + + Sbjct: 233 VGHETDFTIADFVADLRAPTPSAAAELVVPDIKVYQRELFLLKTKIMNLMKAQVLHSKKE 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L N + + R+ L + L + I +K + ++ S + Sbjct: 293 FEGLKRALYLNNPIKKNEVLKQRVKNLKKSLTKEMLSIFNQKKNELLVLNEKLDSLSPLK 352 Query: 365 NIQKNRQHILEKQQH 379 + + +L K+ Sbjct: 353 VLTRGYTIVLNKEGQ 367 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 2/130 (1%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 ++ + ++ L K++ L + + L +K L + + Sbjct: 274 LKTKIMNLMKAQVLHSKKEFEGLKRALYLNNPIKKNEVLKQRVKNLKKSLTKEMLSIFNQ 333 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 + + L S + L RGYT + + IT R + T + I F DG+A A+ Sbjct: 334 KKNELLVLNEKLDSLSPLKVLTRGYTIVLNKEGQVITSSRKVKTSEEVGILFSDGRATAV 393 Query: 498 VINKAPPKEQ 507 V E+ Sbjct: 394 VKEVKEDGER 403 >gi|296120701|ref|YP_003628479.1| exodeoxyribonuclease VII large subunit [Planctomyces limnophilus DSM 3776] gi|296013041|gb|ADG66280.1| exodeoxyribonuclease VII, large subunit [Planctomyces limnophilus DSM 3776] Length = 414 Score = 280 bits (716), Expect = 4e-73, Method: Composition-based stats. Identities = 136/364 (37%), Positives = 197/364 (54%), Gaps = 10/364 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 D P+ +VS+LS L+ IVE V V GEISG SSGH YF+LKD S+I A+ Sbjct: 2 PGNDLPKLTVSQLSDCLREIVEMAFPRVIVTGEISGLT-RASSGHVYFTLKDEASQIKAV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +W+ + K++F +G+ IG + + +YQ+++E L P G G L A + KL Sbjct: 61 MWRSSAIKLKFDLRDGLAVEAIGGVEVYAPRGQYQLMVERLTPQGIGPLELAFRQLHAKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 EGLF K P+P PK IAVITSP GA + DILQ + R+ + V++ PV VQG E Sbjct: 121 AAEGLFDVARKRPLPRFPKRIAVITSPAGAAVHDILQILLRRWPGVNVVVVPVPVQGPEA 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +IA A+ ++ L P D++I RGGGS+EDLW FN+E++ RAIA IP+ISA Sbjct: 181 APKIAAALGMVHRL------PDVDVVICGRGGGSLEDLWAFNEELVARAIAQCRIPVISA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD T+AD AD RA TP+ AAE +PVK L L RL + ++ L + Sbjct: 235 VGHETDVTIADLVADQRALTPSEAAERVIPVKAEWVQHLDQLRDRLCSSLVALTNSRRKE 294 Query: 307 LNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L +AL + + LD L L+ + + + +++ + Sbjct: 295 LEQLKKRRALAKPLEQIHRFSRELDDLETRLKQSWKRKLASLNAELESAGRALQALSPLA 354 Query: 365 NIQK 368 +++ Sbjct: 355 VLER 358 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 57/161 (35%), Gaps = 6/161 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ ++ ++ E QH++Q+ + + + L Sbjct: 237 HETDVTIADLVADQRALTPSEAAERVIPVKAEWVQHLDQLRDRLCSSLVALTNSRRKELE 296 Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L+++ +I + L TR++ K+ S + + R LQ+ + L Sbjct: 297 QLKKRRALAKPLEQIHRFSRELDDLETRLKQSWKRKLASLNAELESAGRALQALSPLAVL 356 Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIV 498 +RG++ + + I + + R+ DGQ + V Sbjct: 357 ERGFSISKRVPGGDLIQSVKQVQVGDRLATLVADGQILSQV 397 >gi|120611236|ref|YP_970914.1| exodeoxyribonuclease VII large subunit [Acidovorax citrulli AAC00-1] gi|120589700|gb|ABM33140.1| Exodeoxyribonuclease VII large subunit [Acidovorax citrulli AAC00-1] Length = 436 Score = 280 bits (716), Expect = 4e-73, Method: Composition-based stats. Identities = 117/382 (30%), Positives = 192/382 (50%), Gaps = 6/382 (1%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + V L + +E+ + V VRGEI+G+ SSGH YFS+KD +I Sbjct: 5 PDPATAPRIWDVGALCRAVADALEARFNPVAVRGEITGF-SRASSGHCYFSIKDGQGQIR 63 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ + P +G + G++ + Q+I+ESL +G G L + K Sbjct: 64 CAMFRRAAMLLNGTPRDGEMVELRGRLAVYEARGDLQLIVESLQRAGQGALFEQFLRLKA 123 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF K +P +P+ I ++TSP A + D++ + R P L V++ P VQG Sbjct: 124 RLESEGLFDSARKRGLPVMPRSIGLVTSPGAAALHDVVTALRRRVPHLPVVLAPALVQGA 183 Query: 185 ECPKEIANAILQLNTLKE---GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 P I A+ L + E G P ++I+L RGGGSIEDLW FNDE + R + S + Sbjct: 184 AAPASICTALRALYRMAEPGGGAGHPPVEVILLVRGGGSIEDLWAFNDEQVARTLVQSPV 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++S +GHETD+T+AD+ ADLRAPTPT AAE+ + + + L RL++ + R + Sbjct: 244 PVVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPQATWLAGMDALAGRLSDSLQRQLD 303 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L+ + L ++ RL RL ++L H R + + + +R+ Sbjct: 304 GRHQRLDMAAQRLGRPSGLVTRQELRLARLAQQLRHGAAWTTQRYAQRQDALADRL-PRA 362 Query: 362 LIHNIQKNRQHILEKQQHIEQI 383 + + + Q + +E + Sbjct: 363 VAQGVARQAQRLDHAALRLELL 384 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 44/145 (30%), Gaps = 4/145 (2%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 SD L + Q + Q + + R + + LR Sbjct: 295 SDSLQRQLDGRHQRLDMAAQRLGRPSGLVTRQELRLAR----LAQQLRHGAAWTTQRYAQ 350 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 L R+ ++ + + L+ + L+RGY + D+ +T+ Sbjct: 351 RQDALADRLPRAVAQGVARQAQRLDHAALRLELLDPRLVLQRGYALLTDSGGLPVTRTAQ 410 Query: 479 LATKTRILINFFDGQANAIVINKAP 503 + T + DG+ + V P Sbjct: 411 VRTGDAVRAAVSDGEIDLTVSAPRP 435 >gi|302337858|ref|YP_003803064.1| exodeoxyribonuclease VII large subunit [Spirochaeta smaragdinae DSM 11293] gi|301635043|gb|ADK80470.1| exodeoxyribonuclease VII, large subunit [Spirochaeta smaragdinae DSM 11293] Length = 407 Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats. Identities = 135/357 (37%), Positives = 201/357 (56%), Gaps = 10/357 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 Y+VS L+ +K +ES S V V GEIS +R + GH YFSLKD + I A++++G Sbjct: 11 YTVSGLTALIKERLESGFSSVAVEGEISNFRPSAA-GHWYFSLKDQDAVISAVMFRGKSA 69 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +++F PE+GI + G ++ + YQII ++++ SG G +L LE+RK++L EGLF Sbjct: 70 RVDFYPEDGITVKISGNLSVYEKRGNYQIICDTMVRSGEGAILAMLEERKRRLAAEGLFD 129 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANA 193 + K PIP P +AVITSPTGA +RDILQ + R + + I P VQGD ++IA Sbjct: 130 LEKKKPIPPFPARVAVITSPTGAALRDILQVLGRRGAGVDITILPTLVQGDGAAEQIAAQ 189 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I + N G ++II+ RGGGS+EDL F++E + RA+A S+IPIISA+GHETD Sbjct: 190 IRRANRYNMG------EVIIIGRGGGSLEDLLPFSEEAVARAVAESTIPIISAVGHETDT 243 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLL 311 L+D AADLRAPTP+ AAE+ +E L + + + + ++R + S Sbjct: 244 ALSDLAADLRAPTPSAAAELVCEEREALLLRVGAIAGEMRDNLLRGAEKARILLQRFSGE 303 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + L R LD E + I + II +++ + +QK Sbjct: 304 EMKERMQRLLQPRRLELDDQREEAVRAIGEKITAERHRLALIIKELETSNPLAILQK 360 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 55/168 (32%), Gaps = 6/168 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ---KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + + +++ + + R+ +L + I ++ +L + + + Sbjct: 239 HETDTALSDLAADLRAPTPSAAAELVCEEREALLLRVGAIAGEMRDNLLRGAEKARILLQ 298 Query: 401 IL--HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 ++E+ + + + + KI + +++ + L++ L Sbjct: 299 RFSGEEMKERMQRLLQPRRLELDDQREEAVRAIGEKITAERHRLALIIKELETSNPLAIL 358 Query: 459 KRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 ++GY + +N +T + I G +A + K Sbjct: 359 QKGYAVVSRKRDNGLVTDAAEERLGEALCIRLAKGSVDATIEEIHSEK 406 >gi|189347516|ref|YP_001944045.1| exodeoxyribonuclease VII large subunit [Chlorobium limicola DSM 245] gi|189341663|gb|ACD91066.1| exodeoxyribonuclease VII, large subunit [Chlorobium limicola DSM 245] Length = 465 Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats. Identities = 134/346 (38%), Positives = 203/346 (58%), Gaps = 6/346 (1%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL++ +K +ES V V+GEIS + HSSGH Y +LKD+ ++I A+IWK T Sbjct: 69 LSVSELTFRIKSELESIFPVVRVKGEISNCK-RHSSGHTYLTLKDDQAQIPAVIWKNTGT 127 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +I F +G+E + G++ +P S +YQ+I S+ +G G L A +KL + G F+ Sbjct: 128 RISFDLRDGMEVIAEGRLEVYPPSGRYQLICSSVTEAGQGQLQQAFAMLLQKLAKAGYFN 187 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K IP IP+ I +ITSPTGAVI D+ + I RFP +R+++FPV+VQGD+ +E+ Sbjct: 188 AERKKKIPAIPETIGIITSPTGAVIEDMGRVIERRFPAVRILLFPVRVQGDDAAREVKRG 247 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N R D++I+ARGGGS+EDL FN+EM+ AI SS+P+ISA+GHETD Sbjct: 248 IDYFN--NPADPRHRADVLIVARGGGSMEDLQAFNEEMVAEAIYRSSVPVISAVGHETDI 305 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+AD ADLRA TP+ AAE+AVP + L ++ N + R + ++ + ++SL ++ Sbjct: 306 TIADMVADLRAGTPSIAAELAVPDRGDLLKTIENQQMRQSALMQAKLDGAKMEIDSLRQS 365 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 L + + P L+ + +K F ++ Sbjct: 366 YAFNRPLMQLQQLSEKAESFPELLDLAVRRKWLQKATEFAAANQQL 411 Score = 74.4 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 38/123 (30%), Gaps = 1/123 (0%) Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 Q + Q + + + + ++ L + ++ + K Sbjct: 340 QQMRQSALMQAKLDGAKMEIDSLRQSYAFNRPLMQLQQLSEKAESFPELLDLAVRRKWLQ 399 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 T + + L Y+ L+RGY ++ FIT L R I F DG Sbjct: 400 KATEFAAANQQLALLDYRKILQRGYALVKKET-RFITGSCELGLSDRADILFHDGSVAVT 458 Query: 498 VIN 500 V Sbjct: 459 VTG 461 >gi|295108282|emb|CBL22235.1| exodeoxyribonuclease VII, large subunit [Ruminococcus obeum A2-162] Length = 409 Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats. Identities = 112/403 (27%), Positives = 195/403 (48%), Gaps = 13/403 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +SV +++ ++K++ + + V+GE+S + H+SGH YFSLKD + +++ G Sbjct: 4 IFSVGQINRYVKNMFTQDFILQKIYVKGEVSNCK-YHTSGHIYFSLKDETGVLSCVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F ++G +V G + + +YQ+ + + G+G L K +L E G Sbjct: 63 HRRGLAFRMKDGDRVVVGGAVDVYERDGRYQLYAKEITLEGAGALYERFLALKAELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F++++K PIP + V+T+PTGA ++DI R P L++I++P VQG+ I Sbjct: 123 MFAEEYKQPIPHYIHRLGVVTAPTGAAVQDIRNISLRRNPYLQIILYPALVQGEGAADSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + I L+ D II+ RGGGSIEDLW FN+E + RAI PIISA+GHE Sbjct: 183 VHGIHMLDQA-------GVDTIIVGRGGGSIEDLWAFNEEKVARAIFECRTPIISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ +DLRAPTP+ AAE+AV + + RL + ++ L Sbjct: 236 TDFTIADFVSDLRAPTPSAAAELAVDDFRQIMQEIRIGRERLERGMNGKLELYRMKLAKY 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + L SR RL + ++ + + R + + + + Sbjct: 296 QMRMQYLSPEGKLRDSRQRLIDNENRIRKAMQDKVLGYRHQLGICLERYRGLSPLEKLNQ 355 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + ++Q + V+Q ++ +L + Sbjct: 356 GYAFVADEQGRGIRSVEQVQPGDTVKVNVTDGVLEAEIRHIRR 398 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 43/151 (28%), Gaps = 5/151 (3%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I + + E+ + + R + + ++ L + ++ + Sbjct: 264 RQIMQEIRIGRERLERGMNGKLELYRMKLAKYQMRMQYL-----SPEGKLRDSRQRLIDN 318 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 RI + K+ + I + + L +GY + D I + Sbjct: 319 ENRIRKAMQDKVLGYRHQLGICLERYRGLSPLEKLNQGYAFVADEQGRGIRSVEQVQPGD 378 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQL 514 + +N DG A + + + Sbjct: 379 TVKVNVTDGVLEAEIRHIRREDWENGTADNR 409 >gi|121534500|ref|ZP_01666323.1| exodeoxyribonuclease VII, large subunit [Thermosinus carboxydivorans Nor1] gi|121306993|gb|EAX47912.1| exodeoxyribonuclease VII, large subunit [Thermosinus carboxydivorans Nor1] Length = 407 Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats. Identities = 133/386 (34%), Positives = 217/386 (56%), Gaps = 13/386 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +SVSE++ ++K +++ + L+ V VRGEIS ++ H SGH YF+LKD + + ++++ Sbjct: 3 IFSVSEITCYIKGLLDGDDTLADVFVRGEISNFK-RHYSGHCYFTLKDAGATLRCVMFRS 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++F P +G++ + G I+ F +YQ+ ++ L+P+G G L ALE+ K+KL EG Sbjct: 62 RVQFLKFEPRDGLKVIAGGHISVFERDGQYQLYVDQLVPAGLGELSLALEQLKEKLAAEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF+++ K P+P +PK + VITSP GA +RDI+ R P + ++++PV+VQG E +I Sbjct: 122 LFAEERKKPLPLLPKAVGVITSPVGAALRDIITVARRRHPGIPIVLYPVQVQGPEAAPQI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+AI N L D++I+ RGGGS+E+LW FN+E VRAIA SSIP++SA+GHE Sbjct: 182 AHAIRVFNRLA------NVDVLIVGRGGGSLEELWAFNEEEAVRAIAASSIPVVSAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI---NTL 307 TD+TLAD+AAD RA TP+ AAE+ P + L + L + + + IK Sbjct: 236 TDYTLADFAADRRAATPSQAAEIVFPDVQELGRYIRMLRQAMESHVQSYIKRYRLLVEQY 295 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + ++ + LD + L H ++ K F I ++ + + Sbjct: 296 RDSRALRRRPVEIVAAKQQLLDISLQRLHHIVKEQFTTKQHRFKVIAEKLAVLNPLMVLA 355 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFL 393 + + I + V Q + L Sbjct: 356 RGYSIVRTPDGRIIRAVDQVGKDQLL 381 Score = 98.7 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 42/135 (31%), Gaps = 3/135 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAI---LHMLREQTKNRIFYLHTHIKKLITRI 427 Q + + + Q ++ H++ + + LR + + + + R+ Sbjct: 264 QELGRYIRMLRQAMESHVQSYIKRYRLLVEQYRDSRALRRRPVEIVAAKQQLLDISLQRL 323 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 I+ + + + L L RGY+ ++ + I + + I Sbjct: 324 HHIVKEQFTTKQHRFKVIAEKLAVLNPLMVLARGYSIVRTPDGRIIRAVDQVGKDQLLEI 383 Query: 488 NFFDGQANAIVINKA 502 G+ A V Sbjct: 384 VLHRGRIEARVEKIG 398 >gi|307636951|gb|ADN79401.1| Exodeoxyribonuclease VII large subunit [Helicobacter pylori 908] gi|325995542|gb|ADZ50947.1| Exodeoxyribonuclease VII large subunit [Helicobacter pylori 2018] gi|325997138|gb|ADZ49346.1| Exodeoxyribonuclease VII large subunit [Helicobacter pylori 2017] Length = 420 Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 189/383 (49%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPNFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L + L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLRHSFKTLLHQKKAHLEHLAA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L LE R ++ +I L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLTIALENKTLEFLRFKKMLLEKISIQVLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E +E +K + L + Sbjct: 357 -TEHLNRLENALKLAYANLKLPQ 378 >gi|156742851|ref|YP_001432980.1| exodeoxyribonuclease VII large subunit [Roseiflexus castenholzii DSM 13941] gi|156234179|gb|ABU58962.1| exodeoxyribonuclease VII, large subunit [Roseiflexus castenholzii DSM 13941] Length = 393 Score = 280 bits (715), Expect = 6e-73, Method: Composition-based stats. Identities = 117/359 (32%), Positives = 194/359 (54%), Gaps = 13/359 (3%) Query: 15 YSVSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS+L+ +L+ +++++ V V GEIS + H SGH YF+LK+ ++I A++WK Sbjct: 4 LTVSQLNMYLRDLLDADDLLRDVWVEGEISSF-SRHFSGHCYFTLKEGEAQIGAVMWKSV 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ LP G L G++ + + Q+ +++L P+G G L E+ K++L EGL Sbjct: 63 AARLAALPANGEAVLAHGRVAFYEVRGQVQLYVDTLRPAGIGLLQAQFERLKERLAAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F K P+P +P I ++TSPTGA ++D+L + R+PL ++ P +VQG + I Sbjct: 123 FDPSRKRPLPLLPHRIGIVTSPTGAALQDVLNILRRRYPLAEIVFAPCRVQGAGAAETII 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 NA+ L D+II+ARGGG EDLW FNDE + RA+ S +P++S +GHET Sbjct: 183 NALYALYE-------TNVDVIIVARGGGGAEDLWTFNDEQVARAVFASPVPVVSGVGHET 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TL D+ AD+RAPTP+ AAE+ P L + ++ RL + + + T++ L Sbjct: 236 DTTLIDFVADVRAPTPSAAAELVSPDIVALTDDIAHMRNRLEAAMTQRLANARETIDRLK 295 Query: 312 KA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + R +D L R LE + + R+++ + + + Sbjct: 296 LRLSLRSPESRIRRDRQHIDELLRRATSTLERRLILARTRLDGARGRLEALSPLATLAR 354 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 2/127 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 I + +E + Q R + L + ++RI HI +L+ R L Sbjct: 268 DIAHMRNRLEAAMTQ--RLANARETIDRLKLRLSLRSPESRIRRDRQHIDELLRRATSTL 325 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ T + L++ + TL RGY +Q IT+ +A RI I Sbjct: 326 ERRLILARTRLDGARGRLEALSPLATLARGYAIVQSPTGTLITEAAQVAPDDRIEIIVRR 385 Query: 492 GQANAIV 498 G+ +A V Sbjct: 386 GRFHAHV 392 >gi|325473468|gb|EGC76663.1| exodeoxyribonuclease 7 large subunit [Treponema denticola F0402] Length = 398 Score = 279 bits (714), Expect = 6e-73, Method: Composition-based stats. Identities = 127/366 (34%), Positives = 194/366 (53%), Gaps = 10/366 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 YSV E++ +K ++ES +V + GEIS +R + GH YF+LKD + I A+++KG Sbjct: 5 YSVYEITLQIKELLESGFGYVSIEGEISNFRPSAA-GHLYFTLKDEKASIQAVMFKGKTR 63 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + F+P++G+ G I+ + YQIIIE + +G G +L LE+RKKKL EG+F Sbjct: 64 SLSFVPKDGMTVKAEGAISVYEQRGSYQIIIEEMSLAGEGNILKMLEERKKKLAAEGIFD 123 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 + K P+P+ PK IAVITSPTGA +RDI+ + R + +++ P VQG+E + Sbjct: 124 SERKKPLPYFPKRIAVITSPTGAAVRDIINVVKRRNEKIGIVVLPAIVQGEEAAPVLIR- 182 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 LK D+II+ RGGGS+EDL F+DE +VRAIA P+ISA+GHE DW Sbjct: 183 -----QLKIADEKNLGDLIIIGRGGGSLEDLLPFSDEELVRAIAACKTPVISAVGHEIDW 237 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLK 312 L+D+AAD+RAPTP+ AAE+A P+ + S+ L I I+ N Sbjct: 238 ALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIERIRLMLNNFKPD 297 Query: 313 ALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 +L + + R D E+ ++ + + ++ + + Sbjct: 298 SLELRFRNIQQPLLARFDNAKEEILSGMQERCKDLRQRLLVLNKILEGANPQGILDRGYS 357 Query: 372 HILEKQ 377 + Q Sbjct: 358 IVRNAQ 363 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 7/172 (4%) Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 E++ L + + L + + + Q+IE ++ R Sbjct: 233 HEIDWALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIE---RIRL 289 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + K L + + + I + + K + + +IL+ Sbjct: 290 MLNNFKPDSLELRFRNIQQPLLA---RFDNAKEEILSGMQERCKDLRQRLLVLNKILEGA 346 Query: 453 AYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + L RGY+ +++ I + +LI G A V + Sbjct: 347 NPQGILDRGYSIVRNAQTGKTIRSFSQVKEGEALLIQPSKGTIEAEVKRVSS 398 >gi|119357870|ref|YP_912514.1| exodeoxyribonuclease VII large subunit [Chlorobium phaeobacteroides DSM 266] gi|119355219|gb|ABL66090.1| Exodeoxyribonuclease VII large subunit [Chlorobium phaeobacteroides DSM 266] Length = 402 Score = 279 bits (714), Expect = 7e-73, Method: Composition-based stats. Identities = 142/372 (38%), Positives = 208/372 (55%), Gaps = 8/372 (2%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SVSEL+ H+K+ +ES V VRGEIS + H+SGH Y +LKD ++I A+IW Sbjct: 1 MSTAILSVSELTRHIKNELESLFPRVSVRGEISNCK-RHNSGHIYLTLKDEGAQIPAVIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K ++ +G + G++ +P S +YQ+I S+ +G G L A +KL + Sbjct: 60 KHLAGRLAADLRDGQTVVAEGRLEVYPPSGRYQLICTSVTDAGEGALQQAFALLLQKLSK 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G FS + K +P IPK I +ITSPTGAVI D+ RFP + + +FPV+VQG E + Sbjct: 120 AGYFSAERKRAMPKIPKTIGIITSPTGAVIEDMGNTFHRRFPAVSLRLFPVRVQGTEAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EI +AI N ++E RPD++I+ARGGGS+EDL FN+E++ AI NS IP+ISA+G Sbjct: 180 EICSAIRYFNNIRE--PDLRPDLLIVARGGGSMEDLQPFNEEIVADAIYNSHIPVISAVG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD ADLRA TP+ AAE+AVP + L + NL+ R ++ + ++ Sbjct: 238 HETDITIADMVADLRAGTPSIAAELAVPDRSELLRMIENLQNRQGTLLQAKLAGAELEID 297 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNI 366 SL + + L + D L LE +E + Y + R L + Sbjct: 298 SLRNSYAFNRPLL--HMKQCDDLLANLERQMEQSVRTGYLQTAQRYLSARQHLSLLDYRK 355 Query: 367 QKNRQHILEKQQ 378 R + L K++ Sbjct: 356 TLARGYALVKKE 367 Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 3/133 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITRI 427 R +L ++++ L+ + +I L + + + L ++ Sbjct: 267 RSELLRMIENLQNRQGTLLQAKLAGAELEIDSLRNSYAFNRPLLHMKQCDDLLANLERQM 326 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 E + + L Y+ TL RGY ++ +T + L + R + Sbjct: 327 EQSVRTGYLQTAQRYLSARQHLSLLDYRKTLARGYALVK-KEGAVVTSAQCLHLQDRTEL 385 Query: 488 NFFDGQANAIVIN 500 F DG A+V Sbjct: 386 LFHDGSVTAVVTE 398 >gi|254778963|ref|YP_003057068.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori B38] gi|254000874|emb|CAX28808.1| Exodeoxyribonuclease VII large subunit (Exonuclease VII large subunit) [Helicobacter pylori B38] Length = 420 Score = 279 bits (714), Expect = 7e-73, Method: Composition-based stats. Identities = 120/419 (28%), Positives = 198/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G ++ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGVSVYVPRGDYQINCFKIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 ++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCLNALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHFAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I L + + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRLKKTLLEKISIQTLTNPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + R + Sbjct: 357 -TERLNRLENALKLAYANLKLPQFGAFVSKNHQAIELEALKAGDKIELNNEKARASAEI 414 >gi|28211244|ref|NP_782188.1| exodeoxyribonuclease VII large subunit [Clostridium tetani E88] gi|31563102|sp|Q894G7|EX7L_CLOTE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|28203684|gb|AAO36125.1| exodeoxyribonuclease VII large subunit [Clostridium tetani E88] Length = 396 Score = 279 bits (714), Expect = 8e-73, Method: Composition-based stats. Identities = 127/362 (35%), Positives = 213/362 (58%), Gaps = 12/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV++++ ++K+ ++++ ++ +RGEIS ++ IHSSGH YFS+KD S+I+ +++ Sbjct: 3 IKVLSVTDINNYIKNTMDNDFILNNASIRGEISNFK-IHSSGHVYFSMKDQWSKINCVMF 61 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + ++FLPE+G++ + G+I+ + YQ+ + L G G L A EK K KL + Sbjct: 62 RSAAKGLKFLPEDGMKIIANGRISAYVKDGSYQLYCDKLELEGLGELYIAFEKLKNKLEK 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I VITS TGA IRDI+ + R ++I+P VQG Sbjct: 122 EGLFKEECKKSLPQYAKKIGVITSETGAAIRDIINVATRRNKNCEILIYPSLVQGTNASS 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I I +LN D+IILARGGGSIE+LW FNDE + R I S +PII+ +G Sbjct: 182 DIIKGIKELNK------VKDLDVIILARGGGSIEELWVFNDEELAREIFKSKVPIITGVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+AD+ +D RAPTP+ AAE+A+ + L S L N + LN ++ +K K N L+ Sbjct: 236 HETDFTIADFVSDKRAPTPSAAAEIAIKDLQELNSRLENYKNALNYYVLNNLKEKYNKLD 295 Query: 309 SLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L ++ + ++ + ++D + +L ++I + ++ + + + S+ ++ + Sbjct: 296 RLKLSMEGNSPERIIINEYNKIDFIINKLNSYIKIEVDKRKEELSRMSILLSSNNPLNIL 355 Query: 367 QK 368 K Sbjct: 356 NK 357 Score = 84.8 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 5/141 (3%) Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----EQTKNR 412 ++ + + + E +E Y+ KEK L L+ + Sbjct: 250 RAPTPSAAAEIAIKDLQELNSRLENYKNALNYYVLNNLKEKYNKLDRLKLSMEGNSPERI 309 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 I + I +I ++ + ++ +S + +L S N L +GY+ IQD Sbjct: 310 IINEYNKIDFIINKLNSYIKIEVDKRKEELSRMSILLSSNNPLNILNKGYSVIQDGTGKV 369 Query: 473 ITQKRNLATKTRILINFFDGQ 493 I + L + ++ IN DG+ Sbjct: 370 INTIKELDKEKKVTINLKDGK 390 >gi|126179922|ref|YP_001047887.1| exodeoxyribonuclease VII, large subunit [Methanoculleus marisnigri JR1] gi|125862716|gb|ABN57905.1| Exodeoxyribonuclease VII large subunit [Methanoculleus marisnigri JR1] Length = 414 Score = 279 bits (713), Expect = 9e-73, Method: Composition-based stats. Identities = 120/364 (32%), Positives = 200/364 (54%), Gaps = 16/364 (4%) Query: 12 HPEYSVSELSYHLKHIVESN-LSHVCVRGEISGYRGIHSSGHAYFSLKD----NHSRIDA 66 P + VSE+S + +++ L + VRGE++ Y+ H+SGH YFSL + + + I+ Sbjct: 14 TPIFGVSEVSGLICDLLDDARLRRIWVRGEVTNYKN-HASGHRYFSLSERNGRSSAVINC 72 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++W+ + + + F P++G++ L G + + +YQ+I+ ++P+G G +E+ K++ Sbjct: 73 VMWRTSASTLAFAPKDGMDVLAWGSVEVYEPHGRYQLIVREMLPAGLGERHLMVERWKQE 132 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186 L EGLF K P+P P+ I V+TSPTGA ++DIL IS R+P VI+ P VQG+ Sbjct: 133 LDAEGLFDPGRKRPLPLFPQRIGVVTSPTGAAVKDILSVISRRYPADVILSPTAVQGEGA 192 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EIA AI +++ L D+II+ RGGGS EDL+ FN +VRA+A P+ISA Sbjct: 193 HVEIAEAIRRIDGL--------ADVIIVGRGGGSFEDLFAFNHPDVVRAVAACRTPVISA 244 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D L D+AADLRAPTP+ AAE AVP + + L E R++ ++ + + Sbjct: 245 VGHEVDTALCDFAADLRAPTPSAAAERAVPERREVLRELAGCEERMHLLVHSRLAASQSE 304 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L + + + ++ RL L + R+ + ++ + Sbjct: 305 VEELRERMRPGRLARRINERMQRLAEHDDLLRRAAVARVQRERSALAELRANLEGKNPLA 364 Query: 365 NIQK 368 +++ Sbjct: 365 ILER 368 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 53/157 (33%), Gaps = 2/157 (1%) Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + S + + R+ + E E++ + + E + +R Sbjct: 254 CDFAADLRAPTPSAAAERAVPERREVLRELAGCEERMHLLVHSRLAASQSEVEELRERMR 313 Query: 407 E-QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465 + RI + + + +++ ++++ L+ L+RGY + Sbjct: 314 PGRLARRINERMQRLAEHDDLLRRAAVARVQRERSALAELRANLEGKNPLAILERGYCIV 373 Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + + +LA R+ I DG+A A+V Sbjct: 374 E-AGGRVVRSAASLAPGERVTIRMMDGRAVAVVEETT 409 >gi|160899010|ref|YP_001564592.1| exodeoxyribonuclease VII large subunit [Delftia acidovorans SPH-1] gi|259646287|sp|A9BWI7|EX7L_DELAS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|160364594|gb|ABX36207.1| exodeoxyribonuclease VII, large subunit [Delftia acidovorans SPH-1] Length = 445 Score = 279 bits (713), Expect = 9e-73, Method: Composition-based stats. Identities = 120/393 (30%), Positives = 203/393 (51%), Gaps = 17/393 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MNP + + V L + +++ + V VRGEISG+ +SGH YFS+KD Sbjct: 8 MNPAAAPL-----VWEVGALCRAVSDALQARFNPVAVRGEISGF-SRAASGHCYFSIKDA 61 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +I +++ ++F P +G + G++ + Q+++ES+ +G G L Sbjct: 62 GGQIRCAMFRRAAQLMDFSPRDGELVELRGRLGVYEQRGDLQLVVESMQRAGQGALFEQF 121 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 + K +L EGLF K +P +P+ I V+TSP A + D++ + R P + V++ P Sbjct: 122 LRLKARLEAEGLFDAARKRSLPPLPRGIGVVTSPGAAALHDVITALRRRVPHIPVVLVPA 181 Query: 180 KVQGDECPKEIANAILQLNTLKEGRT---------CPRPDIIILARGGGSIEDLWHFNDE 230 VQG + P + +A+ +L L P D I+L RGGGSIEDLW FNDE Sbjct: 182 LVQGVQAPASLIDALQRLYGLAREGAGSVDGSVAGAPPIDTILLVRGGGSIEDLWAFNDE 241 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 + R I S +P+IS +GHETD+T+AD+ ADLRAPTPT AAE+ +E +L ++ Sbjct: 242 RLARTIVQSPVPLISGVGHETDFTIADFCADLRAPTPTAAAELVSQPREVWMGALQLMQG 301 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 RL + + RL+ + L+ + L + L+ SR +L R + L H +++ + R Sbjct: 302 RLEDGVQRLLDRQQQRLDLAAQRLGRPSEQLARSRLQLSRQAQRLRHAMQLRLQRMDHAG 361 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 + ++ + + + + H+ + ++ + Sbjct: 362 QGLQAQLPAG-MRRGLDRRADHLARMELRLQLL 393 >gi|326790846|ref|YP_004308667.1| exodeoxyribonuclease VII large subunit [Clostridium lentocellum DSM 5427] gi|326541610|gb|ADZ83469.1| exodeoxyribonuclease VII, large subunit [Clostridium lentocellum DSM 5427] Length = 409 Score = 279 bits (713), Expect = 9e-73, Method: Composition-based stats. Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV E++ ++ ++E + L+ + ++GEIS + H SGH YF++KD + I+A+ Sbjct: 1 MKRKIVSVWEVNQYVSRLIEEDYMLNDIWIQGEISNCK-YHQSGHVYFTIKDPKASINAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F EEG++ +IT + + YQ ++ + G G L E+ K +L Sbjct: 60 MFERDVRRLTFRLEEGMKIYARVRITIYEKTGAYQAYVQDVEKQGKGLLYERFERLKAQL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 ++EGLF D +K IP PK + VITS TGA ++DI+Q R P + + I+P VQG+ Sbjct: 120 MQEGLFDDTYKKSIPTFPKHVGVITSLTGAAVKDIMQVAKRRNPSIPLTIYPTHVQGELA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI AI N R D+IIL RGGGSIEDLW FN+E + RAI S IPI+SA Sbjct: 180 VPEIVAAIRLAN------EEKRVDVIILGRGGGSIEDLWAFNEEAVARAIFESKIPIVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T++D+ +D RA TP+ AAEM VP K L L + E L + K N Sbjct: 234 VGHEIDFTISDFVSDKRAATPSAAAEMVVPSKSELLELLGSYERSLKKRMEERTKAARNQ 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L LL D ++ +L + + + R + I+++ ++ Sbjct: 294 LTYLLSRPVYAKKDTFYKVRMQEVEDYCNQLRGAYKDHLTKSERRYELAIHKLDQLSPLN 353 Query: 365 NIQK 368 +++ Sbjct: 354 TLKR 357 Score = 90.2 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 3/146 (2%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY--LHTHIKKLITR 426 ++ +LE E+ +K+ + + ++ L K FY ++ + Sbjct: 264 SKSELLELLGSYERSLKKRMEERTKAARNQLTYLLSRPVYAKKDTFYKVRMQEVEDYCNQ 323 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + L + NTLKRGY+ +N + +++ + Sbjct: 324 LRGAYKDHLTKSERRYELAIHKLDQLSPLNTLKRGYSLAM-KDNQLVKSVADISEGDELS 382 Query: 487 INFFDGQANAIVINKAPPKEQPTKKC 512 I DG A V K + ++K Sbjct: 383 ITVTDGTFMAKVCEKENSNGKKSRKK 408 >gi|315586255|gb|ADU40636.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 35A] Length = 420 Score = 279 bits (713), Expect = 1e-72, Method: Composition-based stats. Identities = 121/383 (31%), Positives = 194/383 (50%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTTHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+T+ YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISTYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--NTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378 >gi|238917017|ref|YP_002930534.1| exodeoxyribonuclease VII [Eubacterium eligens ATCC 27750] gi|238872377|gb|ACR72087.1| exodeoxyribonuclease VII [Eubacterium eligens ATCC 27750] Length = 403 Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats. Identities = 108/359 (30%), Positives = 196/359 (54%), Gaps = 13/359 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V +++ ++K++ + + + V V+GEIS + H+SGH YF+LKD + + I++ Sbjct: 4 VYTVKQVNSYIKNMFKQDFLLNSVSVKGEISNCK-YHTSGHIYFTLKDADAALSVIMFAS 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ F ++G+ +V G++ F + KYQ+ ++ G G L E+ K+ + G Sbjct: 63 QAARLSFKLKDGMSVVVSGRVDVFDAAGKYQLYANTVQQEGIGELYQKYEQLKQYYEDMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 F+ ++K P+P + + V+TS TGA ++DI+ R P ++++++P VQG+ + I Sbjct: 123 YFAKEYKRPLPAFTRKLGVVTSKTGAAVQDIMNISKRRNPYIQIVLYPAYVQGEHAKQSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + I +L+ + D II+ RGGGSIEDLW FN+ +V A+ N+S P+ISA+GHE Sbjct: 183 VSGITRLDKM-------GLDCIIVGRGGGSIEDLWAFNEPEVVEAVFNASTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+TL D+ AD+RAPTP+ AAE+AV +++ + E RL ++ + K + L L Sbjct: 236 TDFTLTDFVADMRAPTPSAAAELAVTEVAAVENRIYEYERRLKQQMMYSLSAKRDYLERL 295 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + N + R RL + +L ++ ++++ + + Sbjct: 296 KLQMEYLNPVNQIYDKRQRLMNIEDKLNMLIKRCAAENRNRLRLYASKLEGLSPLKKLD 354 Score = 96.7 bits (239), Expect = 8e-18, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 46/131 (35%), Gaps = 2/131 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 I E ++ ++Q + L + + L N+I+ + + ++ ++ Sbjct: 269 RIYEYERRLKQQMMYSLSAKRDYLERLKLQMEYL--NPVNQIYDKRQRLMNIEDKLNMLI 326 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + + L+ + L GY I+++ N I +++ I + D Sbjct: 327 KRCAAENRNRLRLYASKLEGLSPLKKLDMGYGYIENSEGNRIVSAGQVSSDDEITVYLKD 386 Query: 492 GQANAIVINKA 502 G + VI Sbjct: 387 GSIRSKVIEVG 397 >gi|167893142|ref|ZP_02480544.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 7894] Length = 335 Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats. Identities = 101/262 (38%), Positives = 157/262 (59%), Gaps = 8/262 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVP 276 +AD+AAD+RAPTPTGAAE+ P Sbjct: 254 IADFAADVRAPTPTGAAELVSP 275 >gi|317013705|gb|ADU81141.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Gambia94/24] Length = 420 Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats. Identities = 121/384 (31%), Positives = 190/384 (49%), Gaps = 10/384 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEENKLPKPNFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHFARTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLRRSFKTLLHQKKAHLEHLAA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR-IKSDFLIHNIQKNRQ 371 +L S L L+I + K F + ++ + Q Sbjct: 301 SLKR------LSFENKHHLNTLKLEKLKIALDNKTLEFLRLKKTLLEKISTQLSTSPFLQ 354 Query: 372 HILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 355 TKTERLNRLENALKLAYANLKLPQ 378 >gi|149194320|ref|ZP_01871417.1| exodeoxyribonuclease VII large subunit [Caminibacter mediatlanticus TB-2] gi|149135495|gb|EDM23974.1| exodeoxyribonuclease VII large subunit [Caminibacter mediatlanticus TB-2] Length = 448 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 129/419 (30%), Positives = 213/419 (50%), Gaps = 11/419 (2%) Query: 13 PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS L+ +K I+ES+ V V GE+S HSSGH YF++KD S I+ +WK Sbjct: 2 KPITVSGLNTQIKSILESHFEIVYVEGEVSKVT-YHSSGHMYFTIKDEKSAINCAMWKSN 60 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 L+K++F + G + LV G I + +Y++I +S+ PSG G L A E+ K++L + G Sbjct: 61 LSKMKFKLKVGDKILVYGAINLYIPRGEYKLIAQSITPSGIGELQLAFERLKEELSKLGY 120 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K P+P PK IA+ITS TGA ++D+L+ R+ L + +F V VQGD ++IA Sbjct: 121 FDIEKKKPLPKFPKRIALITSSTGAALQDMLRVAKKRWLLSKFYLFDVLVQGDGAAEDIA 180 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + + D+II+ RGGGS EDLW FN+ ++ AI + PIISA+GHE Sbjct: 181 RKIKKADEYIFDDG-DGFDLIIVGRGGGSKEDLWAFNERVVADAIYEAKTPIISAVGHEI 239 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+ ++D+ AD RA TP+ A E+A+P K + + + N ++ K L+ L Sbjct: 240 DYLISDFVADKRAATPSNAIEIALPDKNEMLMMIDEMINSFNFRYETILHKKEKILSHLF 299 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + + L + + + + II +K + ++ + + + + Sbjct: 300 ELFEANSIFNKLLEKQREIKFTKNQYLSKINSIIEKKENNLINLRKAFEIMSPLKKLHQQ 359 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITR 426 ++ + + ++ +K I K++++ L L E K R I K R Sbjct: 360 KEEM----EFLKTSIKSVTSEILKMKEKQLNSLKELFEISNPKKREKEGFGEIIKNNKR 414 >gi|317181567|dbj|BAJ59351.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F57] Length = 420 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 197/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYIPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--GTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWWQRLDGFNVKLHRSFKILLHQKKVHLEHLAD 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + +L+ LE R ++ +I + L + + Sbjct: 301 FLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + R + Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELNNEKARASAEI 414 >gi|320101742|ref|YP_004177333.1| exodeoxyribonuclease VII large subunit [Isosphaera pallida ATCC 43644] gi|319749024|gb|ADV60784.1| exodeoxyribonuclease VII, large subunit [Isosphaera pallida ATCC 43644] Length = 519 Score = 278 bits (711), Expect = 2e-72, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 197/362 (54%), Gaps = 9/362 (2%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + P SV+EL+ + ++ ++ S V VRGE+S SGH YF +KD+ + IDA+I Sbjct: 97 PAELPILSVTELTALIDGVLRTDFSAVAVRGELSRI-SRAQSGHLYFRIKDDFAVIDAVI 155 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W+ T ++ F EG+E G + + YQ+++ ++ P G G L A +R + Sbjct: 156 WRSTAARLPFDLTEGLEVEARGGLEVYAPRGSYQLVLTAIEPRGVGALDLAYRQRLARFQ 215 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 EGLF K P P I V+TSP GA +RDILQ + R+PL VI+ P VQG E Sbjct: 216 AEGLFDPARKRSRPAFPMRIVVVTSPVGAAVRDILQILGRRWPLAEVIVVPTVVQGAEAA 275 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +IA A+L + L RPD++I+ RGGGS+EDLW FN+E++VRAIA +ISA+ Sbjct: 276 PQIAQALLMADRL------LRPDVMIVGRGGGSVEDLWAFNEEVVVRAIAACEHMVISAV 329 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D+TLAD AD RA TP+ AAE+ P+ E L+ +L+ RL+ + R + L Sbjct: 330 GHEVDFTLADLVADQRAATPSEAAELCAPLAEKLREALVATRTRLDRALARRLHEASARL 389 Query: 308 NSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + + +R R++RL L+ + + R+ + R+ + + + Sbjct: 390 ALARSGLERAGRALILQTRNRVERLADRLDRAMRADLLRRRATLRALAGRLDALSPLAIL 449 Query: 367 QK 368 + Sbjct: 450 AR 451 Score = 100 bits (248), Expect = 8e-19, Method: Composition-based stats. Identities = 17/156 (10%), Positives = 47/156 (30%), Gaps = 13/156 (8%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +K R+ ++ + +++ + R + L + I +++L R Sbjct: 361 EKLREALVATRTRLDRALA---RRLHEASARLALARSGLERAGRALILQTRNRVERLADR 417 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN----------FITQK 476 ++ + + ++ L + + L RGY+ +++ + Sbjct: 418 LDRAMRADLLRRRATLRALAGRLDALSPLAILARGYSLTLLEDDSATCGPPQRPLVVRDA 477 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512 L R+ G + V E + Sbjct: 478 TCLKPGDRLRTRLAQGMVLSRVEAVEAGDEPNKEHA 513 >gi|323140956|ref|ZP_08075868.1| exodeoxyribonuclease VII, large subunit [Phascolarctobacterium sp. YIT 12067] gi|322414559|gb|EFY05366.1| exodeoxyribonuclease VII, large subunit [Phascolarctobacterium sp. YIT 12067] Length = 401 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 126/364 (34%), Positives = 207/364 (56%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + YSVSE++ +KHI+E L ++ V GEIS ++ SGH YF+LKD + + + Sbjct: 1 MTEAVYSVSEINNFIKHILEQEPELRNLQVVGEISNFKRYP-SGHCYFTLKDAGAVLKCV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + F P+ G + +G++ + YQ+ + L+ G G L+ A EK K+KL Sbjct: 60 MFRSKAVNLRFQPQNGDTVVAVGRLAVYERDGVYQLYTDLLLQQGVGDLMQAYEKLKQKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 GLF+ + K +P P+ + +ITSP GA +RD++ R ++++++PVKVQG+ Sbjct: 120 ERAGLFAPERKQQLPLHPRTVGIITSPAGAAVRDVITVSRRRNQGIKLLLYPVKVQGEGA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EIA AI N D++I+ RGGGSIEDLW FN+E+ VRA+A S IP++SA Sbjct: 180 AAEIAAAIEFFNR------KKLADVLIVGRGGGSIEDLWAFNEEITVRAVAASKIPVVSA 233 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+TL D+AAD+RA TP+ AAE+ V E + ++ LE R +++ L+ + Sbjct: 234 VGHETDFTLCDFAADVRAATPSQAAELVVADVEGYKQRVVYLEQRARSLLSALLTQQQRR 293 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L++L+ + L + ++ + RLD R L LE+ + + R+ S + Sbjct: 294 LDNLVNSWALRDPERLFADQAQRLDTASRRLREALELHLQQDEHKLALAAARLDSLSPLA 353 Query: 365 NIQK 368 + + Sbjct: 354 VLGR 357 Score = 96.7 bits (239), Expect = 8e-18, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 44/133 (33%), Gaps = 2/133 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 +Q ++ +Q ++ +++ + + + R+ Sbjct: 269 KQRVVYLEQRARSLLSAL--LTQQQRRLDNLVNSWALRDPERLFADQAQRLDTASRRLRE 326 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L ++ +++ L S + L RGY+ Q ++ ++ +L +L Sbjct: 327 ALELHLQQDEHKLALAAARLDSLSPLAVLGRGYSVSQKSDYTLVSSVDDLRWGDELLTTV 386 Query: 490 FDGQANAIVINKA 502 DG ++V Sbjct: 387 ADGVITSVVQQVE 399 >gi|149019199|ref|ZP_01834561.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP23-BS72] gi|147931069|gb|EDK82048.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP23-BS72] Length = 446 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D+II+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLIIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SVVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|188527066|ref|YP_001909753.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470] gi|226736765|sp|B2US91|EX7L_HELPS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|188143306|gb|ACD47723.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470] Length = 420 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 191/383 (49%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKNIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYPFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378 >gi|3869268|gb|AAC77362.1| exodeoxyribonuclease VII large subunit [Pseudomonas fluorescens] Length = 401 Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats. Identities = 118/443 (26%), Positives = 197/443 (44%), Gaps = 57/443 (12%) Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +++ +++ ++ ++G+ V GK++ F G YQ+I++++ P+G G L A Sbjct: 1 GAQVRCALFRNNAARVRQALKDGLAVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAF 60 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 + K+KL EGLFS + K P+P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 61 DALKEKLSAEGLFSAERKVPLPAHPRRIGIISSPTGAVIRDIISVFRRRAPNIELTLIPT 120 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E +I A+ + D +ILARGGGS+EDLW FN+E + RA+ Sbjct: 121 AVQGREAIPQIVRALKLADAR-------GFDALILARGGGSLEDLWCFNEEAVARAVDAC 173 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P HL + NL RL ++ Sbjct: 174 VTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDASHLVRQVENLHRRLVMLMRNR 233 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRI 357 + + L + + L + + L RLD L E + + + R+ Sbjct: 234 LSHDRLRLEGMARRLRHPGERLRQQAQRLDDLDMPPCARSAFERSLNTRRERLIRLETRL 293 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + RQ + + + + +++ L+ L+ + + Sbjct: 294 AGQHPGRQLALLRQRLDSLAERLPRAMREGLKARRLQLQSQ------------------- 334 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L + TL RGY+ + D I Sbjct: 335 ----------------------------MQTLHVVSPLATLGRGYSILLDERGQAIRNAV 366 Query: 478 NLATKTRILINFFDGQANAIVIN 500 T R+ +GQ V + Sbjct: 367 QTHTGQRLTARLGEGQLQVRVED 389 >gi|167823046|ref|ZP_02454517.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 9] Length = 277 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 101/262 (38%), Positives = 157/262 (59%), Gaps = 8/262 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVP 276 +AD+AAD+RAPTPTGAAE+ P Sbjct: 254 IADFAADVRAPTPTGAAELVSP 275 >gi|78776880|ref|YP_393195.1| exodeoxyribonuclease VII large subunit [Sulfurimonas denitrificans DSM 1251] gi|123550575|sp|Q30SS1|EX7L_SULDN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|78497420|gb|ABB43960.1| Exodeoxyribonuclease VII large subunit [Sulfurimonas denitrificans DSM 1251] Length = 416 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 137/490 (27%), Positives = 216/490 (44%), Gaps = 81/490 (16%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVS L+ +K ++E + S V V GE+S HSSGH YF+LKD +S I A+I+K Sbjct: 4 LSVSSLNEQIKALLEESFSRVLVEGELSRITF-HSSGHIYFTLKDENSTIKAVIFKANAA 62 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++F +EG++ ++ G IT + +YQI S+ P+G G L A E+ K +L +G F Sbjct: 63 KLKFQLQEGLKVILDGAITLYKPRGEYQINCFSISPAGHGALALAYEQLKNRLASKGYFE 122 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 K +P PK IA+ITS TGA + D+L+ R+ + + I+ V VQGD I A Sbjct: 123 SSRKKQLPKFPKRIALITSATGAAVADMLRVAMSRYRAIEIDIYDVLVQGDNAAPSIIRA 182 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + +T DII+L RGGGSIEDLW FN+E++ AI ++ PIISA+GHE DW Sbjct: 183 LSLADT-------KGYDIIVLGRGGGSIEDLWAFNEEIVADAIFSAITPIISAVGHEIDW 235 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ ADLRAPTP+ A EM +P ++ Sbjct: 236 VISDFVADLRAPTPSAAMEMCLPDEK---------------------------------- 261 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 +D L E + ++ + HI + + I + I Sbjct: 262 ---------ELYQFIDSLVARYEQMISQKLYGVKQELEHISRLYQDHSIEKKISYKLEEI 312 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + + + ++ + ++ + R + Sbjct: 313 AQLKLSFTNSIYFKMQS-------------------------FNKEVESIKIRFPNAIQS 347 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD-G 492 +I V ++L+S + K+G+ I ++ I +L + D Sbjct: 348 RINIVQNQVLTLQKMLESNHPRLKTKKGFAQI-SKDSKVI-DIESLIVDEVFDL-MSDRV 404 Query: 493 QANAIVINKA 502 +A VINK Sbjct: 405 VISAKVINKK 414 >gi|108562686|ref|YP_627002.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori HPAG1] gi|122386734|sp|Q1CUP4|EX7L_HELPH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|107836459|gb|ABF84328.1| exonuclease VII, large subunit [Helicobacter pylori HPAG1] Length = 420 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 197/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEMVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 ++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPICELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTRNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAD 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + +L+ LE R ++ +I + L + + Sbjct: 301 FLKRLS--FENKHHLNALKLEQLKIALENKTLEFLRFKKTLLEKISTQALTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + R + Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFLSKNNQAIELEALKAGDKIELSNEKARASAEI 414 >gi|148993817|ref|ZP_01823219.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP9-BS68] gi|168489035|ref|ZP_02713234.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae SP195] gi|147927642|gb|EDK78667.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP9-BS68] gi|183572546|gb|EDT93074.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae SP195] gi|332073548|gb|EGI84027.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae GA17570] Length = 446 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 148/500 (29%), Positives = 229/500 (45%), Gaps = 62/500 (12%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D+II+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLIIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + +R + K Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKRMATAVRNVLSKKQEAL 293 Query: 309 SLLKA---LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ RLD+L L+ +L I + +++ + Sbjct: 294 KKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQLSPVTK 353 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 IQ+ + + + + + + E K Sbjct: 354 IQRYQDRLGQLDKLLGSQMALVYDAKVAEAKR---------------------------- 385 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + L + RGY ++ + + +L K ++ Sbjct: 386 -------------------LSEALLMLDTSRIVARGYAIVKKEE-SIVDSVESLKKKDQV 425 Query: 486 LINFFDGQANAIVINKAPPK 505 + DGQ V + + Sbjct: 426 TLLMRDGQVELEVKDVKTKE 445 >gi|167909838|ref|ZP_02496929.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 112] Length = 292 Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats. Identities = 103/275 (37%), Positives = 161/275 (58%), Gaps = 8/275 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 +AD+AAD+RAPTPTGAAE+ P + L L + Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQ 288 >gi|320529118|ref|ZP_08030210.1| exodeoxyribonuclease VII, large subunit [Selenomonas artemidis F0399] gi|320138748|gb|EFW30638.1| exodeoxyribonuclease VII, large subunit [Selenomonas artemidis F0399] Length = 403 Score = 277 bits (709), Expect = 3e-72, Method: Composition-based stats. Identities = 128/358 (35%), Positives = 191/358 (53%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+++ ++K + E LS + +RGE+S ++ SGH YF+LKD + + +++ G Sbjct: 5 SVSDVTRYIKSMFEGEAILSDILIRGELSNFKRYP-SGHCYFTLKDAAASMKCVMFNGYA 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ +V G I+ + YQ+ S+ G+G L A E+ K+KL EGLF Sbjct: 64 RNLRFTPENGMQVIVGGNISVYERDGAYQLYATSINVEGAGMLALAFEQLKEKLRAEGLF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 + HK P+P PK I ++TS GAV+RDI + R+ +R+++ PV VQG E +IA Sbjct: 124 DEAHKKPLPRFPKRIGIVTSEAGAVLRDIYKVSKRRWNGVRLVLHPVLVQGTEAAGQIAA 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N D++I+ RGGGS EDLW FN+E +VRAI S IP+ISA+GHETD Sbjct: 184 AIRFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEPVVRAIYASRIPVISAVGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310 TLAD+AAD RA TP+ AAE AVP + + L RL+ R + L Sbjct: 238 TTLADFAADRRAATPSQAAEFAVPDGAEIARQIAGLSTRLDTARKRHLVQAQMRLQTLHE 297 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 N L+ R DR+ + L + + R++ + + + Sbjct: 298 HPWRRNPKLLLARYMQRTDRMTQRLLDAADRRRSDLRHRLELALRRLELLNPVQLLYR 355 Score = 77.1 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 52/136 (38%), Gaps = 3/136 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I ++ K+H + + + + H R K + ++ R+ Sbjct: 268 RQIAGLSTRLDTARKRH--LVQAQMRLQTLHEHPWRRNPKLLLARYMQRTDRMTQRLLDA 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + R L+ L RG++ ++ + +++ + L+ + I F Sbjct: 326 ADRRRSDLRHRLELALRRLELLNPVQLLYRGFSIVE-KDGKTVSRAKELSPGDAVCITFA 384 Query: 491 DGQANAIVINKAPPKE 506 DG+ +A+V + A + Sbjct: 385 DGKVSAVVADGAKEAQ 400 >gi|167844608|ref|ZP_02470116.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei B7210] gi|167917864|ref|ZP_02504955.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei BCC215] Length = 285 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 102/268 (38%), Positives = 159/268 (59%), Gaps = 8/268 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQ 282 +AD+AAD+RAPTPTGAAE+ P + L Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLL 281 >gi|91788806|ref|YP_549758.1| exodeoxyribonuclease VII large subunit [Polaromonas sp. JS666] gi|91698031|gb|ABE44860.1| Exodeoxyribonuclease VII large subunit [Polaromonas sp. JS666] Length = 436 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 109/371 (29%), Positives = 192/371 (51%), Gaps = 9/371 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 + V L + +E+ + V V+GEI+G+ +SGH YFSLKD ++ +++ Sbjct: 22 VWPVGSLLRAIADSLEARFNPVAVQGEITGF-SRAASGHCYFSLKDEQGQVRCAMFRRAA 80 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + ++F P +G + G++ + + Q+++ES+ +G G L K KL EGLF Sbjct: 81 SLLDFAPRDGQLVELRGRLGVYEPRGELQLVVESMRQAGQGNLFEQFLVLKAKLEAEGLF 140 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P +P+ I V+TS A + D++ + R P + V+I+P VQG + E+ Sbjct: 141 DAGRKRALPMLPRAIGVVTSLGAAALHDVVSALQRRVPHIPVVIYPASVQGGQAAGELRE 200 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+L+ E D+++L RGGG++EDLW FNDE + R I +S +P+IS +GHETD Sbjct: 201 ALLKAYRRDE------VDVLLLVRGGGAMEDLWAFNDEQLARTIVSSPVPVISGVGHETD 254 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+AD+ AD+RAPTPT AAE+ + +L + R+ + R ++ L+ Sbjct: 255 FTIADFCADVRAPTPTAAAELCAQPQTVWLDTLGLVLQRMQRAVDRQLQSHAQRLDWAAD 314 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + ++ + RL L + L H + + + + + + ++Q +RQ Sbjct: 315 RVSRPSHLVTRQQARLAGLAQNLRHAMRSALTHETLRVQALGAELPREV-AGSLQHSRQR 373 Query: 373 ILEKQQHIEQI 383 + Q +E + Sbjct: 374 VERAQLRLELL 384 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 49/143 (34%) Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + + + + Q ++ V + + ++ + LR ++ + + Sbjct: 289 LVLQRMQRAVDRQLQSHAQRLDWAADRVSRPSHLVTRQQARLAGLAQNLRHAMRSALTHE 348 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 ++ L + ++ ++ V L+ K L+RGY + D + IT+ Sbjct: 349 TLRVQALGAELPREVAGSLQHSRQRVERAQLRLELLDPKLVLQRGYAWLADMQGHPITRA 408 Query: 477 RNLATKTRILINFFDGQANAIVI 499 R + DG+ + V Sbjct: 409 RATHPGQAVRATLADGEVDLTVS 431 >gi|317012103|gb|ADU82711.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Lithuania75] Length = 420 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 118/383 (30%), Positives = 191/383 (49%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G ++ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGVSVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 ++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I + + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVMARGGGSMEDLYSFNDEKIADTLHFAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNSLENALKLAHANLKLPQ 378 >gi|317180064|dbj|BAJ57850.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F32] Length = 420 Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 192/383 (50%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQIK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378 >gi|217033450|ref|ZP_03438880.1| hypothetical protein HP9810_1g64 [Helicobacter pylori 98-10] gi|216944155|gb|EEC23583.1| hypothetical protein HP9810_1g64 [Helicobacter pylori 98-10] Length = 420 Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats. Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 ++ ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SVAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLN--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378 >gi|222528994|ref|YP_002572876.1| exodeoxyribonuclease VII large subunit [Caldicellulosiruptor bescii DSM 6725] gi|222455841|gb|ACM60103.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor bescii DSM 6725] Length = 454 Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats. Identities = 130/499 (26%), Positives = 211/499 (42%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N + E+SV EL+ +LK VE + L ++ ++GE+ R S H YF LKD + Sbjct: 4 SNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IRPSVSGDHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I + + + G + LV G + + ++ + + G G L L++ Sbjct: 62 KIKCVFFWFDK---NVEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL +EGLF ++K IP PK + ++TS GA IRDIL I RF ++V I+ V Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I NT + ++II+ RGGG+ EDL FN+EM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNTEEP------VEVIIVGRGGGAFEDLMAFNNEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 PIISA+GHE D+ L+D+ AD+RA TPT A EM V ++ LI + ++ + I + Sbjct: 233 PIISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLIEYQKKMKSAIEKKFN 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L T++ +D +L + + +R+ + R+ Sbjct: 293 NVKEKVGILQYKLYQNSPANTVAKRAQDIDLYCHKLSFAISRKLHEAHRNLKNFEKRLAD 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + R + + + + K+ + K + Sbjct: 353 LNPESRLSIARTNFDICSKRLGEAFKKIFQQKEFAYKVNL-------------------- 392 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 L + N LKRGY+ N+ +T + Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTSISQV 424 Query: 480 ATKTRILINFFDGQANAIV 498 + I+ DG + V Sbjct: 425 SNGDEIVTQLSDGIIKSKV 443 >gi|150403666|ref|YP_001330960.1| exodeoxyribonuclease VII large subunit [Methanococcus maripaludis C7] gi|150034696|gb|ABR66809.1| Exodeoxyribonuclease VII [Methanococcus maripaludis C7] Length = 407 Score = 277 bits (708), Expect = 4e-72, Method: Composition-based stats. Identities = 127/365 (34%), Positives = 205/365 (56%), Gaps = 12/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S +VSEL+ ++K +E + L ++GEIS +H SGH YF+LKD +S ID Sbjct: 8 SAFSNTLTVSELNNYVKSTLEEDYLLKRASIKGEISNCT-LHKSGHVYFTLKDENSVIDC 66 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++K + F P EG+ ++ GK++ + + KYQ S+ G G L EK K+K Sbjct: 67 VMFKPYTKNLNFSPTEGMSVILKGKVSLYTKTGKYQFYCNSMEKDGIGDLFIKFEKLKEK 126 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 L +EGLF + +K IP PK I +ITSPTGA I+DI++ R + +II+P VQG+ Sbjct: 127 LEKEGLFDETNKQKIPKYPKNIGIITSPTGAAIKDIIKVTRNRNSSVNLIIYPAIVQGES 186 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K + +L+LN L + D+II+ARGGGS+EDLW FNDE + RAI S P+++ Sbjct: 187 AAKTVIAGLLELNKL------EKIDLIIIARGGGSMEDLWCFNDESLARAIFESKKPVVT 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D+T++D+ +DLRA TP+ AAE+ V + L+S + N E L + + I + Sbjct: 241 GIGHEIDFTISDFVSDLRAATPSNAAELTVYNENELKSMVNNFERILKHRMKIEIANRSY 300 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ L + + + + ++R+ + H ++ I + + F + + + + Sbjct: 301 ELDILYSKIEKNSPKSKIEKQKLYIERIMTLMNHEIKNKISYELKRFEKSYSLLNAYNPL 360 Query: 364 HNIQK 368 + + K Sbjct: 361 NVLNK 365 Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 63/133 (47%), Gaps = 2/133 (1%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKKLITR 426 N + + E+I+K ++ + ++ IL+ + + K++I +I++++T Sbjct: 272 NENELKSMVNNFERILKHRMKIEIANRSYELDILYSKIEKNSPKSKIEKQKLYIERIMTL 331 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + +KI + +L ++ N L +GY+ IQD N+N + K + T+ + Sbjct: 332 MNHEIKNKISYELKRFEKSYSLLNAYNPLNVLNKGYSIIQDENDNVMNSKNSFKTENNVK 391 Query: 487 INFFDGQANAIVI 499 I DG +A + Sbjct: 392 ITLKDGTIDAHIT 404 >gi|261839115|gb|ACX98880.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 52] Length = 420 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 192/383 (50%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--GTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKALLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378 >gi|312622737|ref|YP_004024350.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor kronotskyensis 2002] gi|312203204|gb|ADQ46531.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor kronotskyensis 2002] Length = 454 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 130/499 (26%), Positives = 211/499 (42%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N + E+SV EL+ +LK VE + L ++ ++GE+ R S H YF LKD + Sbjct: 4 NNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IRPSVSGDHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I + + + G + LV G + + ++ + + G G L L++ Sbjct: 62 KIKCVFFWFDK---NVEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL +EGLF ++K IP PK + ++TS GA IRDIL I RF ++V I+ V Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I NT + ++II+ RGGG+ EDL FN EM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNTEEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 PIISA+GHE D+ L+D+ AD+RA TPT A EM V ++ LI + R+ + I + Sbjct: 233 PIISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLIEYQKRIKSAIEKKFN 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L T++ +D +L + + +++ + R+ Sbjct: 293 NVKEKVGILQYKLYQNSPSNTIAKCAQDIDLYSHKLSFAISKKLHEAHKNLKNFEKRLAD 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + R + ++ + + K+ + K + Sbjct: 353 LNPESRLSIARTNFDICRKRLGEAFKKIFQQKEFVYKVNL-------------------- 392 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 L + N LKRGY+ N+ +T + Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTSISQV 424 Query: 480 ATKTRILINFFDGQANAIV 498 + I+ DG + V Sbjct: 425 SNGDEIVTQLSDGIIKSKV 443 >gi|167580076|ref|ZP_02372950.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis TXDOH] Length = 295 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 104/282 (36%), Positives = 165/282 (58%), Gaps = 8/282 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG + V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K +P P+ I V+TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 +AD+AAD+RAPTPTGAAE+ P + L L + L + Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGL 295 >gi|317471817|ref|ZP_07931154.1| exonuclease VII [Anaerostipes sp. 3_2_56FAA] gi|316900708|gb|EFV22685.1| exonuclease VII [Anaerostipes sp. 3_2_56FAA] Length = 402 Score = 277 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 123/374 (32%), Positives = 191/374 (51%), Gaps = 14/374 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + +SV++++ ++K I +S+ L+ + ++GE+S + HSSGH YFSLKD+ S+I +++ Sbjct: 2 NKVFSVAQINAYIKRIFQSDYALNRIYIKGEVSNCK-YHSSGHIYFSLKDDKSQISCVMF 60 Query: 70 KG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F E G +V G I+ F + YQ+ + G G L EK K+KL Sbjct: 61 ANQRISGLDFEMENGQTVIVSGSISVFERNGTYQLYANEISLDGIGRLYVEFEKLKEKLY 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF + K PIP PK I ++T+ TGA I DI+ R P ++++++P +VQGD Sbjct: 121 REGLFDHEKKKPIPQNPKTIGIVTAKTGAAIHDIMSVAKRRNPYIQLVLYPAQVQGDGAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I I L+ D II+ RGGGSIEDLW FN+E + RAI + PIIS Sbjct: 181 ETIVRGIETLDR-------YGVDTIIIGRGGGSIEDLWAFNEEKVARAIYAAKTPIISGT 233 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+ADYAADLRA TPT A E+AVP ++ + L+ I +++ L Sbjct: 234 GHEVDTTIADYAADLRAATPTAACELAVPDLRETLDAIDARKRSLSVQIRHILRNYELRL 293 Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L D L R+ L L ++ + R R+ Sbjct: 294 EQYSGKLRRFDPKLQLQEQRMTLAELEDRLTKRMDYLRNRYQHRLELYAQRLHGLSPTAK 353 Query: 366 IQKNRQHILEKQQH 379 + ++ ++ Sbjct: 354 LIGGYGYLSDQSGQ 367 Score = 90.2 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 2/141 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ I +++ + ++ LR L ++ L R K ++ + +L Sbjct: 264 LRETLDAIDARKRSLSVQIRHILRNYELRLEQYSGKL--RRFDPKLQLQEQRMTLAELED 321 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + + + + + L + L GY + D + + +++A I Sbjct: 322 RLTKRMDYLRNRYQHRLELYAQRLHGLSPTAKLIGGYGYLSDQSGQPVVSAKHIAKGDEI 381 Query: 486 LINFFDGQANAIVINKAPPKE 506 I DG V K+ Sbjct: 382 QITISDGSLKTKVSEVTLNKK 402 >gi|242310742|ref|ZP_04809897.1| exodeoxyribonuclease 7 large subunit [Helicobacter pullorum MIT 98-5489] gi|239523140|gb|EEQ63006.1| exodeoxyribonuclease 7 large subunit [Helicobacter pullorum MIT 98-5489] Length = 416 Score = 277 bits (707), Expect = 5e-72, Method: Composition-based stats. Identities = 128/475 (26%), Positives = 216/475 (45%), Gaps = 80/475 (16%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ +K ++E+ V V GE+S HSSGH YFS+KD S + ++++G Sbjct: 4 LSVSELNLQIKSLLEATFLQVSVCGEVSNCT-YHSSGHIYFSIKDKDSALKCVMFRGNAR 62 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++F E+G++ + G IT + +YQ+ S IPSG G L A E+ KK +G F+ Sbjct: 63 NLKFKIEDGMDLTLNGGITLYTPRGEYQLNCLSAIPSGIGELTLAFEQLKKDYEAKGYFN 122 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++ IP P IA+ITS +GAV++D+L+ R+ + + VQG+ + IA Sbjct: 123 NKKS--IPRFPYKIALITSKSGAVLQDMLRIAKRRWNLIEFTLMDTLVQGEGAKENIARN 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I ++L D I++ARGGGS+EDLW FN+ +++ AI + PIISAIGHE D+ Sbjct: 181 IQYADSL-------GFDCIVIARGGGSLEDLWAFNEPLVIEAIYQAKTPIISAIGHEPDF 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D+ ADLRAPTP+ A EM +P K +L L+ L+N I Sbjct: 234 VLSDFVADLRAPTPSAAMEMLLPDKLEWLMNLDLLQKNLDNKI----------------- 276 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 ++I+++KY+ H+ ++ + ++ +Q + Sbjct: 277 --------------------------QMILYQKYKKLEHLEILLQKNSFFAKLENYKQQL 310 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + + Q + ++ L + +E + Sbjct: 311 SLCYKLLTQNFSSKW-------------------------IKYNYLLESLPSLLEQKMLK 345 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + +S+ L+ +N K+GY N I + + +++ Sbjct: 346 ILHKKLNELSLLKAKLEVKNPQNNQKKGYVYA-SFQNKPIKTLDEIPLDSVLILE 399 >gi|312793192|ref|YP_004026115.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180332|gb|ADQ40502.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor kristjanssonii 177R1B] Length = 454 Score = 277 bits (707), Expect = 5e-72, Method: Composition-based stats. Identities = 127/499 (25%), Positives = 209/499 (41%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N + E+SV EL+ +LK VE + L ++ ++GE+ + S H YF LKD + Sbjct: 4 NNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IKPSVSGEHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I + + + + G + LV G + + ++ + + G G L L++ Sbjct: 62 KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL +EGLF ++K IP PK + ++TS GA +RDIL I RF ++V I+ V Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAVRDILNTIYTRFENIQVYIYSCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I NT + ++II+ RGGG+ EDL FN EM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D+ L+D+ AD+RA TPT A EM V ++ L + R+ + + + Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLNEYQKRMKSAMGKTFN 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L L T++ +D +L + + +R+ + R+ Sbjct: 293 MVKEKAGMLQYKLYQNSPANTIAKRAQDIDLYCHKLSFAISRKLHEAHRNLKNFEKRLAD 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + R + + + + K+ + E K + Sbjct: 353 RNPESRLSVARTNFDNCSRRLGEAFKKIFQQKEFEYKVNL-------------------- 392 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 L + N LKRGY+ N+ +T + Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTIAQV 424 Query: 480 ATKTRILINFFDGQANAIV 498 I+ DG + V Sbjct: 425 NNGDEIVTQLSDGIIKSKV 443 >gi|289450046|ref|YP_003475511.1| exodeoxyribonuclease VII large subunit [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184593|gb|ADC91018.1| exodeoxyribonuclease VII, large subunit [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 444 Score = 276 bits (706), Expect = 6e-72, Method: Composition-based stats. Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 79/493 (16%) Query: 13 PEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 PE+SV+E++ ++ ++ +LS + GE+SG + +SSGH YF++KD +++ +++ Sbjct: 17 PEHSVAEVAAYIHKLIRRSADLSAYWICGELSGVK-RYSSGHIYFTIKDEQAQLSCVMYN 75 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 +++ F ++G + + KI + + Q+I+ ++ +GSG L K+KL E Sbjct: 76 SNASRLSFPLKDGKKVKLRCKIDFYEARGQCQLIVLAVEEAGSGQLYAKYLALKEKLAAE 135 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ P+ P+ + VITSP+GAVI+DI RFP ++++P VQG+ Sbjct: 136 GLFANARPLPLL--PRRVGVITSPSGAVIQDICNVSCRRFPAADILLYPAAVQGETAAAT 193 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + IL N L D+II+ RGGGSIEDLW FNDE + RA+A S IP++SA+GH Sbjct: 194 LRRGILLFNRL------KNVDVIIIGRGGGSIEDLWPFNDEELARAVAASEIPVVSAVGH 247 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+T+ D+ AD RAPTP+ AAEM PV++ LQ+ + E R+ + R + + Sbjct: 248 ETDYTICDFVADHRAPTPSAAAEMVWPVRDELQTRIAGAERRMAFALERNWEAANFRYSH 307 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 ++ + + + INR+++ + ++N Sbjct: 308 CA--------------------AHFTATQAAALLNKFFSAWQTAINRLQNQHPLRQTERN 347 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 I +++ QH+RYI L+K+++ + + Sbjct: 348 HSQI----ENLFAAASQHIRYILLQKEQQWRLQTEKLNNLNPLNVLM------------- 390 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 RG+ + D N+ + I + Sbjct: 391 ------------------------------RGFGLVTDKNDAVAVSTAKILPGDNIKVTL 420 Query: 490 FDGQANAIVINKA 502 DG+ V+ Sbjct: 421 QDGKLACKVLAVE 433 >gi|266620365|ref|ZP_06113300.1| exodeoxyribonuclease VII, large subunit [Clostridium hathewayi DSM 13479] gi|288868037|gb|EFD00336.1| exodeoxyribonuclease VII, large subunit [Clostridium hathewayi DSM 13479] Length = 425 Score = 276 bits (706), Expect = 6e-72, Method: Composition-based stats. Identities = 110/373 (29%), Positives = 190/373 (50%), Gaps = 14/373 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSVS+++ ++K++ + + + ++GE+S + H+SGH YF+LKD + I +++ G Sbjct: 4 VYSVSQVNAYIKNMFAQDFALNRISIKGEVSNCK-YHTSGHIYFTLKDRGAAIACVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F EEG + + G + + +YQ+ + + G G L +K + +L E G Sbjct: 63 QRKGLSFKLEEGQKVVAKGSVEVYERDGRYQLYAQEITKEGVGDLFERFQKLRDELEEMG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +FS ++K PIP + ++T+ TGA IRDI+ + R P +++ ++P VQG+ I Sbjct: 123 MFSPEYKQPIPRYAGKVGIVTAQTGAAIRDIMNISARRNPYVQLYLYPALVQGENAKYSI 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L+ L D++I+ RGGGSIEDLW FN+E++ RAI P+ISA+GHE Sbjct: 183 VKGIETLDRL-------GLDVLIVGRGGGSIEDLWAFNEEIVARAIFACRTPVISAVGHE 235 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY AD+RAPTP+ AAE+AV + + L + R ++ Sbjct: 236 TDVTIADYVADMRAPTPSAAAELAVFDYSQFEGQVELYRDALGKSMARKLERYRYQTEQF 295 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + R R L +L++ + I +R+ + + Sbjct: 296 RLRFQLFDPRRQVREQRQRAVDLEEKLKNMMASRIVTDKNRAAEAESRL-RQLIEKQAVR 354 Query: 369 NRQHILEKQQHIE 381 +R + ++ Sbjct: 355 DRHRLELISSRLD 367 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 19/137 (13%), Positives = 48/137 (35%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R +Q + + R + +++ + + L+ +RI + +R+ Sbjct: 286 ERYRYQTEQFRLRFQLFDPRRQVREQRQRAVDLEEKLKNMMASRIVTDKNRAAEAESRLR 345 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 ++ + + + + L + + GY + D N I + I + Sbjct: 346 QLIEKQAVRDRHRLELISSRLDGLSPLKKIGGGYGFLTDGKNRRIESVDQVKQGDPIKVR 405 Query: 489 FFDGQANAIVINKAPPK 505 DG+ +A+V + A Sbjct: 406 IRDGRIDAVVSDTAAAD 422 >gi|313896572|ref|ZP_07830121.1| exodeoxyribonuclease VII, large subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312974757|gb|EFR40223.1| exodeoxyribonuclease VII, large subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 403 Score = 276 bits (706), Expect = 6e-72, Method: Composition-based stats. Identities = 127/358 (35%), Positives = 192/358 (53%), Gaps = 12/358 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+++ ++K + E LS + +RGE+S ++ SGH YF+LKD + + +++ G Sbjct: 5 SVSDVTRYIKSMFEGEAILSDILIRGELSNFKRYP-SGHCYFTLKDAAASMKCVMFNGYA 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F PE G++ +V G I+ + YQ+ S+ G+G L A E+ K+KL EGLF Sbjct: 64 RNLRFTPENGMQVIVGGNISVYERDGAYQLYATSINVEGAGMLALAFEQLKEKLRAEGLF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 + HK P+P PK I ++TS GAV+RDI + R+ +R+++ PV VQG E +I+ Sbjct: 124 DEAHKKPLPRFPKRIGIVTSEAGAVLRDIYKVSKRRWNGVRLVLHPVLVQGTEAAGQISA 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI N D++I+ RGGGS EDLW FN+E +VRAI S IP+ISA+GHETD Sbjct: 184 AIRFFNEKYP------VDVLIVGRGGGSAEDLWAFNEEPVVRAIYASRIPVISAVGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--SL 310 TLAD+AAD RA TP+ AAE AVP + + L RL+ R + L Sbjct: 238 TTLADFAADRRAATPSQAAEFAVPDGAEIARQIAGLSTRLDTARKRHLAQAQMRLQTLHE 297 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 N L+ R DR+ + L + + + R++ + + + Sbjct: 298 HPWRRNPKLLLARYMQRTDRMTQRLSDAADRRRSDLRQRLELALRRLELLNPVQLLYR 355 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 50/136 (36%), Gaps = 3/136 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I ++ K+H + + + H R K + ++ R+ Sbjct: 268 RQIAGLSTRLDTARKRH--LAQAQMRLQTLHEHPWRRNPKLLLARYMQRTDRMTQRLSDA 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + R L+ L RG++ ++ + + + + L+ + I F Sbjct: 326 ADRRRSDLRQRLELALRRLELLNPVQLLYRGFSIVE-KDGKTVRRAKELSPGDAVCITFA 384 Query: 491 DGQANAIVINKAPPKE 506 DG+ +A+V + A + Sbjct: 385 DGKVSAVVADGAKEAQ 400 >gi|331002442|ref|ZP_08325960.1| exodeoxyribonuclease VII [Lachnospiraceae oral taxon 107 str. F0167] gi|330410258|gb|EGG89692.1| exodeoxyribonuclease VII [Lachnospiraceae oral taxon 107 str. F0167] Length = 392 Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats. Identities = 116/358 (32%), Positives = 194/358 (54%), Gaps = 13/358 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSVS+++ ++K++ + + + V GE+S +S H YF++KD + A+++ Sbjct: 2 VYSVSKVNAYIKNMFMQDFVLNKISVEGEVSNCT-YANSNHIYFTIKDEGGTLSAVMFAS 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F + G + +V G I+ + KYQ+ + +G G L + K+KL + G Sbjct: 61 QRGGLSFDMKRGQKVIVTGNISCYEKEGKYQLYASKIEEAGKGDLYEKYLQLKEKLEDMG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ +K IP + I V T+ TGAVI DI R P +R+++ P VQG+ PK I Sbjct: 121 MFNQSYKREIPRFVQSIGVATAQTGAVINDIQNVSYRRNPYVRIVLAPCLVQGEMAPKSI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +AI +L+ + D++I+ RGGGSIEDL+ FNDE + I N+ PIISA+GHE Sbjct: 181 ISAIKKLDKM-------NLDVLIVGRGGGSIEDLYCFNDEELANTIFNAKTPIISAVGHE 233 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ ADLRAPTP+ AAE+A + + +L + +L+ + R I Y L+ L Sbjct: 234 TDFTIADFVADLRAPTPSAAAEIANFIYDDYMYTLDYYKRKLSESVERKIDYAKRDLDML 293 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + RL+ + L+++ + K ++ R++S + + Sbjct: 294 LIRLNTLSPQIRLREQKQRLENFSKILQNSFRNTLENKKISLENLAKRLESSSPLKRL 351 Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 2/126 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++ + + V++ + Y + + L+ L + R+ ++ ++ Sbjct: 268 LDYYKRKLSESVERKIDYAKRDLDMLLIRLNTL--SPQIRLREQKQRLENFSKILQNSFR 325 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + +++ S+ + L+S + L GY I D NN + + L I I F DG Sbjct: 326 NTLENKKISLENLAKRLESSSPLKRLSGGYAYISDENNKKVLSAKTLKPDEEINIFFSDG 385 Query: 493 QANAIV 498 + A V Sbjct: 386 KLRAKV 391 >gi|302872149|ref|YP_003840785.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor obsidiansis OB47] gi|302575008|gb|ADL42799.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor obsidiansis OB47] Length = 454 Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats. Identities = 127/499 (25%), Positives = 208/499 (41%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N + E+SV EL+ +LK VE + L ++ ++GE+ R S H YF LKD + Sbjct: 4 NNVVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IRPSVSGDHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I + + + + G + LV G + + ++ I + G G L L++ Sbjct: 62 KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKITEITDIGLGELFVKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL +EGLF ++K IP PK + ++TS GA IRDIL I RF ++V I+ V Sbjct: 119 LEEKLKQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I NT + ++II+ RGGG+ EDL FN EM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D+ L+D+ AD+RA TPT A E+ V + L R+ + + ++ Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEIVVSFQNKALEKLNEYHKRMKSAMEKIFN 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L T++ +D +L + + +++ + R+ Sbjct: 293 IVKEKVGILQYKLYQNSPANTIAKRAQDIDLYCNKLSFAISRKLHEVHKNLKNFEKRLAD 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + R + + + + K+ + K + Sbjct: 353 ANPESRLSIARTNFDNCSRRLGEAFKKIFQQKEFMYKVNL-------------------- 392 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 L + N LKRGY+ N+ +T + Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTIAQV 424 Query: 480 ATKTRILINFFDGQANAIV 498 I+ DG + V Sbjct: 425 NNGDEIVTQLSDGIIKSKV 443 >gi|297379484|gb|ADI34371.1| exodeoxyribonuclease VII, large subunit [Helicobacter pylori v225d] Length = 420 Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 190/383 (49%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L L+ K L L Sbjct: 241 FLLSDLIADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLRRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378 >gi|167814575|ref|ZP_02446255.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 91] Length = 272 Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats. Identities = 100/259 (38%), Positives = 156/259 (60%), Gaps = 8/259 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++I+ RGGGSIEDLW FNDE + RAIA S +P++ +GHETD+T Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASDVPVVCGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEM 273 +AD+AAD+RAPTPTGAAE+ Sbjct: 254 IADFAADVRAPTPTGAAEL 272 >gi|332673100|gb|AEE69917.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori 83] Length = 424 Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats. Identities = 119/383 (31%), Positives = 193/383 (50%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 ++ ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SVAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + + L +L+ L+ K L L Sbjct: 241 FLLSDSVADLRASTPSNAMEILLPSSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLET 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K ++ L + Sbjct: 357 -TERLNRLENALKLAHAHLKLPQ 378 >gi|78188299|ref|YP_378637.1| exodeoxyribonuclease VII large subunit [Chlorobium chlorochromatii CaD3] gi|78170498|gb|ABB27594.1| Exodeoxyribonuclease VII large subunit [Chlorobium chlorochromatii CaD3] Length = 407 Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats. Identities = 130/358 (36%), Positives = 200/358 (55%), Gaps = 8/358 (2%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 N++D SV+EL+ H+K +ES V VRGEIS + HSSGH Y +LKD+ ++ Sbjct: 1 MEAINAMDA--LSVTELTAHIKSELESLFPFVRVRGEISNCK-QHSSGHIYLTLKDSGAQ 57 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + A+IWK T + + P++G+E + G++ +P S +YQ+I + +G G L A + Sbjct: 58 LPAVIWKSTASLLSIRPKDGMEVVAEGRLELYPPSGRYQLICRHVAQAGVGALQQAFAEL 117 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 +KL G F + K +P IP I +ITSPTGAVI D+ + ++ RFP R+ ++PVKVQ Sbjct: 118 VQKLAALGYFDENRKKTLPTIPTTIGIITSPTGAVIEDMSKVLARRFPAARIALYPVKVQ 177 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G +EIA A+ N + +P +II+ARGGGS+EDL FN+E++ AI S+IP Sbjct: 178 GAGAAEEIAQALDFFN--HTKKKQWKPQVIIVARGGGSLEDLQPFNEEIMAHAIYRSAIP 235 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +ISA+GHETD T+AD AD+RA TP+ AAE+ VP + + + A I+ I+ Sbjct: 236 VISAVGHETDITIADMVADVRAGTPSIAAELVVPDSAQVLRDVEQMVAYAQQILNNKIEG 295 Query: 303 KINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 L+ A + LDR + ++E ++ + I ++ Sbjct: 296 AERELHSLCNSYAFNRPILKMQQCYENLDRFEASMMRSVETTYRQQIQRCTASIQQLN 353 Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 48/147 (32%), Gaps = 7/147 (4%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 I + ++ Q + QQ + ++ R + + + Sbjct: 262 IAAELVVPDSAQVLRDVEQMVAYAQQILNNKIEGAERELHSLCNSYA------FNRPILK 315 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + + ++ + + + + + + + L Y TL+RGY I+ N F Sbjct: 316 MQQCYENLDRFEASMMRSVETTYRQQIQRCTASIQQLNLLDYHKTLERGYALIK-KNGRF 374 Query: 473 ITQKRNLATKTRILINFFDGQANAIVI 499 +T + L I + DG A V Sbjct: 375 VTSAKALQPNDTIELLLHDGVRKASVK 401 >gi|317177074|dbj|BAJ54863.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F16] Length = 420 Score = 276 bits (705), Expect = 8e-72, Method: Composition-based stats. Identities = 122/399 (30%), Positives = 196/399 (49%), Gaps = 5/399 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINVQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTKTE 358 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 L + ++ ++ HLR + E K Sbjct: 359 RLNRLENALKLAHAHLRLSQFGAFVSKNNQAIELEALKR 397 >gi|167747002|ref|ZP_02419129.1| hypothetical protein ANACAC_01714 [Anaerostipes caccae DSM 14662] gi|167653962|gb|EDR98091.1| hypothetical protein ANACAC_01714 [Anaerostipes caccae DSM 14662] Length = 402 Score = 276 bits (705), Expect = 8e-72, Method: Composition-based stats. Identities = 123/374 (32%), Positives = 191/374 (51%), Gaps = 14/374 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + +SV++++ ++K I +S+ L+ + ++GE+S + HSSGH YFSLKD+ S+I +++ Sbjct: 2 NKVFSVAQINAYIKRIFQSDYALNRIYIKGEVSNCK-YHSSGHIYFSLKDDKSQISCVMF 60 Query: 70 KG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ ++F E G +V G I+ F + YQ+ + G G L EK K+KL Sbjct: 61 ANQRISGLDFEMENGQTVIVSGSISVFERNGTYQLYANEISLDGIGRLYVEFEKLKEKLY 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF + K PIP PK I ++T+ TGA I DI+ R P ++++++P +VQGD Sbjct: 121 REGLFDHEKKKPIPQNPKTIGIVTAKTGAAIHDIMSVAKRRNPYIQLVLYPAQVQGDGAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I I L+ D II+ RGGGSIEDLW FN+E + RAI + PIIS Sbjct: 181 ETIVRGIETLDR-------YGVDTIIIGRGGGSIEDLWAFNEEKVARAIYAAKTPIISGT 233 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+ADYAADLRA TPT A E+AVP ++ + L+ I +++ L Sbjct: 234 GHEVDTTIADYAADLRAATPTAACELAVPDLRETLDAIDARKRSLSVQIRHILRNYELRL 293 Query: 308 NSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L D L R+ L L ++ + R R+ Sbjct: 294 EQYSGKLRRFDPKLQLQEQRMTLAELEDRLTKRMDYLRNRYQHRLELYAQRLHGLSPTAK 353 Query: 366 IQKNRQHILEKQQH 379 + ++ ++ Sbjct: 354 LIGGYGYLSDQSGQ 367 Score = 93.3 bits (230), Expect = 8e-17, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 49/141 (34%), Gaps = 2/141 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ I +++ + ++ LR L ++ L R K ++ + +L Sbjct: 264 LRETLDAIDARKRSLSVQIRHILRNYELRLEQYSGKL--RRFDPKLQLQEQRMTLAELED 321 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + + + + + L + L GY + D + + ++ + Sbjct: 322 RLTKRMDYLRNRYQHRLELYAQRLHGLSPTAKLIGGYGYLSDQSGQPVLSTAQISEGDEV 381 Query: 486 LINFFDGQANAIVINKAPPKE 506 I DG V P ++ Sbjct: 382 QITISDGSIKTKVTQVIPREK 402 >gi|257459013|ref|ZP_05624132.1| exodeoxyribonuclease VII, large subunit [Campylobacter gracilis RM3268] gi|257443398|gb|EEV18522.1| exodeoxyribonuclease VII, large subunit [Campylobacter gracilis RM3268] Length = 388 Score = 275 bits (704), Expect = 9e-72, Method: Composition-based stats. Identities = 109/303 (35%), Positives = 167/303 (55%), Gaps = 8/303 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ K ++E++ S V V GEIS +R +SGH YF++KD + ID ++K Sbjct: 2 LSVSELNAQAKALLETSFSLVEVEGEISKFRIQSTSGHWYFTIKDASAAIDCAMFKFNAA 61 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 +I F+P G + +V GK++ + + YQI + ++ SG G L A K++L +EGLF Sbjct: 62 RINFIPAVGDKLIVSGKVSLYAPTGAYQIQVSNIRKSGEGELEAAFAALKERLSKEGLFD 121 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 HK +P + IA+ITS A D+L+ RF L ++ ++ VQG+ P I + Sbjct: 122 ASHKKQLPKFAQSIAIITSAGSAAQADMLRTAQDRFALCKIDLYNALVQGEGAPASIISV 181 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + D I++ARGGGS EDLW FNDE + RAI + P+ISA+GHE D+ Sbjct: 182 LRAADA-------KGYDAIVIARGGGSREDLWCFNDEALARAIYATKTPVISAVGHEIDF 234 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 +++D+ AD R+ TPT A +P + SL + L+ +I I N L+ Sbjct: 235 SISDFVADHRSLTPTAAMIDLLPDICAIFQSLDGVSDALDRLIKDKISSAQNVLSLAALE 294 Query: 314 LPN 316 L + Sbjct: 295 LKS 297 >gi|254459098|ref|ZP_05072521.1| exodeoxyribonuclease VII, large subunit [Campylobacterales bacterium GD 1] gi|207084369|gb|EDZ61658.1| exodeoxyribonuclease VII, large subunit [Campylobacterales bacterium GD 1] Length = 395 Score = 275 bits (704), Expect = 9e-72, Method: Composition-based stats. Identities = 123/368 (33%), Positives = 197/368 (53%), Gaps = 11/368 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++ ++ES S V V GE+S H+SGH YF+LKD+ S + A+++KG Sbjct: 3 VLNVSSLNEQIQILLESTFSRVLVEGELSRITF-HNSGHIYFTLKDSTSTLKAVMFKGNA 61 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 K++F +EG++ ++ G IT + +YQI S+ P+G GTL A E+ K+KL +G F Sbjct: 62 TKLKFQLKEGLKVILDGAITLYKPRGEYQINCFSIEPAGHGTLALAYEQLKQKLASKGYF 121 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K +P P IA+ITS TGA ++D+L+ + R+ L + I+ V VQGD IAN Sbjct: 122 EQSIKKQLPKFPSKIALITSATGAALQDMLRVANSRYRALEIDIYDVLVQGDSAASSIAN 181 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI+ +T D I++ RGGGSIEDLW FN+E++ AI + PI+SA+GHE D Sbjct: 182 AIIVSDTR-------EYDFIVIGRGGGSIEDLWAFNEEIVADAIFRAKTPIVSAVGHEID 234 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 W ++D+ +DLR PTP+ A +M +P L +L +L + I+ + I+ L + Sbjct: 235 WLISDFVSDLRVPTPSAAMQMCLPDSNELYQTLDSLSVQYTQIVSQKIQSSKQELTHMYS 294 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + L + L H + + ++ I+S+ +K Sbjct: 295 LYSSHSIQRKLEQKMQEVKILKDSFFHAMSTKLNVAQSQVLNLQKMIESNHPKFKSKKGF 354 Query: 371 QHILEKQQ 378 I + + Sbjct: 355 AQISQDSK 362 Score = 50.5 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 54/164 (32%), Gaps = 7/164 (4%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + ++ ++ +Q E Q ++ + Q+ + + + + L Sbjct: 231 HEIDWLISDFVSDLRVPTPSAAMQMCLPDSNELYQTLDSLSVQYTQIVSQKIQSSKQELT 290 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + ++ +K L +S K+ + V ++++S K Sbjct: 291 HMYSLYSSHSIQRKLEQKMQEVKILKDSFFHAMSTKLNVAQSQVLNLQKMIESNHPKFKS 350 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 K+G+ I ++ I L L + +A VI K Sbjct: 351 KKGFAQI-SQDSKVI-DISTLNVGDDFLAQSAEVSISAKVIKKE 392 >gi|308182434|ref|YP_003926561.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori PeCan4] gi|308064619|gb|ADO06511.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori PeCan4] Length = 420 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 198/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLIIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCIQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I +++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYVDSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWWQRLDGFNLKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + R + Sbjct: 357 -TERLNRLENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELSNEKARASATI 414 >gi|164688610|ref|ZP_02212638.1| hypothetical protein CLOBAR_02255 [Clostridium bartlettii DSM 16795] gi|164603023|gb|EDQ96488.1| hypothetical protein CLOBAR_02255 [Clostridium bartlettii DSM 16795] Length = 416 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 131/357 (36%), Positives = 206/357 (57%), Gaps = 13/357 (3%) Query: 17 VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 VSE + ++K I+ + L + ++GEIS ++ HSSG+ Y SLKD +S+I+ +I++ + Sbjct: 23 VSEANSYIKRILINDPILCSLKIKGEISNFKV-HSSGNVYLSLKDQNSKINCVIFRNDYD 81 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K E G + + G I+ + YQ+ I+ + +G G L K K+KL +EGLF Sbjct: 82 K-SLNLENGTKIIANGYISVYEREGSYQLYIKHIEVAGIGNLYIEFNKLKEKLQKEGLFD 140 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 Q+K PIP IPK I V+TSPTGAVIRDI+ R+P + + ++PVKVQG +EI Sbjct: 141 YQYKKPIPKIPKSIGVVTSPTGAVIRDIINVTKRRYPKVHIKLYPVKVQGQGSKEEICEG 200 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N + D II+ RGGGSIEDLW FN+E + R + S IPIISA+GHE D+ Sbjct: 201 IRFFNEVHP------VDTIIVGRGGGSIEDLWSFNEEEVARCVFESKIPIISAVGHEIDF 254 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ AD+RAPTP+ AAE+A P E L L N++ R+N + +++Y L K Sbjct: 255 TICDFVADMRAPTPSAAAEIATPSLEDLHFKLDNIQTRMNKSLSNIVEYDEQKLKYTFKR 314 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + D ++ LD++ ++ N+E I ++ + ++ + + + + + + Sbjct: 315 INTILNDYIINDKIIELDKITEKINLNIENKIEKESMNLRNLGSLLHNLSPLKTLDR 371 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 51/140 (36%), Gaps = 3/140 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ + Q + + + + Y + K ++ + I + K+ Sbjct: 279 LEDLHFKLDNIQTRMNKSLSNIVEYDEQKLKYTFKRINTILND--YIINDKIIELDKITE 336 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +I + +KI+ ++ +L + + TL RGY+ I + ++ + ++ I Sbjct: 337 KINLNIENKIEKESMNLRNLGSLLHNLSPLKTLDRGYSII-NKDDVVVNSVLKISENDEI 395 Query: 486 LINFFDGQANAIVINKAPPK 505 + DG + V + Sbjct: 396 EVILSDGSLDCTVNKINKKE 415 >gi|308061613|gb|ADO03501.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Cuz20] Length = 420 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 191/383 (49%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYPFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNALENALKLAHANLKLPQ 378 >gi|110596939|ref|ZP_01385229.1| exodeoxyribonuclease VII, large subunit [Chlorobium ferrooxidans DSM 13031] gi|110341626|gb|EAT60086.1| exodeoxyribonuclease VII, large subunit [Chlorobium ferrooxidans DSM 13031] Length = 401 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 129/344 (37%), Positives = 193/344 (56%), Gaps = 6/344 (1%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SVSEL+ +K +E V V+GEIS Y+ HSSGH+Y +LKD+ ++I A+IW Sbjct: 1 MSTEILSVSELTQQIKSELEMTFPAVKVKGEISNYK-RHSSGHSYLTLKDDGAQIPAVIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K T ++ +GI + G++ +P S +YQ+I ++ +G G L A + +KL + Sbjct: 60 KNTGIRLAVELRDGINVVAEGRLEVYPPSGRYQLICTAVTAAGEGALQQAFAELLQKLAK 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F+ + K PIP IP+ IA+ITS TGAVI D+ + + RFP RV+++PVKVQG + + Sbjct: 120 AGYFAAERKKPIPAIPETIALITSSTGAVIEDMSKVLERRFPAARVLLYPVKVQGTDAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +A I N RPD+II+ARGGGS+EDL FN E++ A+ +SSIP+ISAIG Sbjct: 180 SVAAGIAWFNE--TKNPAHRPDVIIIARGGGSLEDLQAFNGEVVANALYHSSIPVISAIG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK--YKINT 306 HETD T+AD ADLRA TP+ AAE+AVP L + L+++ + + ++ + Sbjct: 238 HETDLTIADMTADLRAGTPSIAAELAVPDTGELLRRIETLQSKQDRAVQNKVEGAERQIY 297 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 A + R+ L + K + Sbjct: 298 SICSSYAFNRPPLQMEQFEERITTLLDRTTTTIRNRYSEKAERY 341 Score = 66.7 bits (161), Expect = 8e-09, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 56/177 (31%), Gaps = 6/177 (3%) Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 L + I + +++ + E + IE + + R Sbjct: 225 LYHSSIPVISAIGHETDLTIADMTADLRAGTPSIAAELAVPDTGELLRRIETLQSKQDRA 284 Query: 391 IF-----LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 + E++ + ++ I L+ R + ++ + Sbjct: 285 VQNKVEGAERQIYSICSSYAFNRPPLQMEQFEERITTLLDRTTTTIRNRYSEKAERYASL 344 Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + L Y+ TL+RGY ++ F+T L R+ + F +G A++ + Sbjct: 345 LQQLALLDYRKTLQRGYALVR-KEGKFMTGIAELHPDDRVDLLFHEGTVPAVISSDQ 400 >gi|317179346|dbj|BAJ57134.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori F30] Length = 420 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 119/383 (31%), Positives = 192/383 (50%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 ++ ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SVAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNALENALKLAHANLKLPQ 378 >gi|42526527|ref|NP_971625.1| exodeoxyribonuclease VII, large subunit [Treponema denticola ATCC 35405] gi|41816720|gb|AAS11506.1| exodeoxyribonuclease VII, large subunit [Treponema denticola ATCC 35405] Length = 398 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 127/366 (34%), Positives = 193/366 (52%), Gaps = 10/366 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 YSV E++ +K ++ES +V + GEIS +R + GH YF LKD + I A+++KG Sbjct: 5 YSVYEITLQIKELLESGFGYVSIEGEISNFRPSAA-GHLYFILKDEKASIQAVMFKGKTR 63 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + F+P++G+ G I+ + YQIIIE + +G G +L LE+RKKKL EG+F Sbjct: 64 SLSFVPKDGMTVKAEGAISVYEQRGSYQIIIEEMSLAGEGNILKMLEERKKKLAAEGIFD 123 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 + K P+P+ PK IAVITSPTGA +RDI+ + R + +++ P VQG+E + Sbjct: 124 SERKKPLPYFPKRIAVITSPTGAAVRDIINVVKRRNEKIGIVVLPAIVQGEEAAPVLIR- 182 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 LK D+II+ RGGGS+EDL F+DE +VRAIA P+ISA+GHE DW Sbjct: 183 -----QLKIADEKNLGDLIIIGRGGGSLEDLLPFSDEELVRAIAACKTPVISAVGHEIDW 237 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLK 312 L+D+AAD+RAPTP+ AAE+A P+ + S+ L I I+ N Sbjct: 238 ALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIERIRLMLNNFKPD 297 Query: 313 ALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 +L + + R D E+ ++ + + ++ + + Sbjct: 298 SLELRFRNIQQPLLARFDNAKEEILSGMQERCKDLRQRLLVLNKILEGANPQGILDRGYS 357 Query: 372 HILEKQ 377 + Q Sbjct: 358 IVRNAQ 363 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 51/172 (29%), Gaps = 7/172 (4%) Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 E++ L + + L + + + Q+IE ++ R Sbjct: 233 HEIDWALSDFAADMRAPTPSAAAELAAPILNDIMYSIAVNREDLTQNIENRIE---RIRL 289 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + K L + + + I + + K + + +IL+ Sbjct: 290 MLNNFKPDSLELRFRNIQQPLLA---RFDNAKEEILSGMQERCKDLRQRLLVLNKILEGA 346 Query: 453 AYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + L RGY+ +++ I + +LI G A V + Sbjct: 347 NPQGILDRGYSIVRNAQTGKTIRSFSQVKEGEALLIQPSKGTIEAEVKRVSS 398 >gi|325970930|ref|YP_004247121.1| exodeoxyribonuclease 7 large subunit [Spirochaeta sp. Buddy] gi|324026168|gb|ADY12927.1| Exodeoxyribonuclease 7 large subunit [Spirochaeta sp. Buddy] Length = 398 Score = 275 bits (704), Expect = 1e-71, Method: Composition-based stats. Identities = 124/371 (33%), Positives = 189/371 (50%), Gaps = 12/371 (3%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSS-GHAYFSLKDNHSRIDAIIWKGT 72 E SVS+L+ +K +E + V GEIS + SS GH +F+LKD I A+++KG+ Sbjct: 8 ELSVSDLTSLIKQTLEQGFYGLKVTGEISNF--RPSSTGHWFFTLKDETCSISAVMFKGS 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K++F P+EG + V G + + YQ+ ES+ SG G LL LE RK++ G Sbjct: 66 TWKVDFTPQEGDKVTVTGSLDVYGARGTYQLKCESMEKSGFGQLLAMLEMRKRQYAALGY 125 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++ K PIP P + V+TSPTGA ++DIL + R P L +++ P VQG+ IA Sbjct: 126 FDEKTKKPIPKRPLRVGVVTSPTGAALQDILNILGRRAPSLDILVLPATVQGESAAPSIA 185 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 N ILQ N L D++I+ RGGGSIEDL F++E ++ AI S IPIISA+GHE Sbjct: 186 NRILQANDL------LLCDVLIVGRGGGSIEDLLPFSEECVIEAIHCSQIPIISAVGHEI 239 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL--IKYKINTLNS 309 DW L+D+ ADLRAPTP+ AAE+ ++ + NL +L + + Sbjct: 240 DWALSDFVADLRAPTPSAAAELVSQGYMDYRNQVQNLYEQLQKSMQSRLLLAESKVKRFD 299 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 +S Y L L + ++ I +++ + + + Sbjct: 300 TKAMQVRISNIISTKEYLLANAGNNLVIAQKQLLKSHDARVELAIRELQALSPLAILARG 359 Query: 370 RQHILEKQQHI 380 + ++ + Sbjct: 360 YTVVQNQEGKL 370 Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 5/177 (2%) Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK--- 385 + + + + + + +++ + Q ++ + ++ + + Sbjct: 222 EAIHCSQIPIISAVGHEIDWALSDFVADLRAPTPSAAAELVSQGYMDYRNQVQNLYEQLQ 281 Query: 386 --QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 R + E K K ++ + N I + + +KS V Sbjct: 282 KSMQSRLLLAESKVKRFDTKAMQVRISNIISTKEYLLANAGNNLVIAQKQLLKSHDARVE 341 Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 + R LQ+ + L RGYT +Q+ + K + + + F DG+ A+V Sbjct: 342 LAIRELQALSPLAILARGYTVVQNQEGKLVASKEQAEPGSMLTLTFADGKRKALVKE 398 >gi|194337424|ref|YP_002019218.1| exodeoxyribonuclease VII, large subunit [Pelodictyon phaeoclathratiforme BU-1] gi|194309901|gb|ACF44601.1| exodeoxyribonuclease VII, large subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 402 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 132/362 (36%), Positives = 218/362 (60%), Gaps = 6/362 (1%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SVSEL+ +K +E++ V ++GEIS + H SGH Y +LKD ++I A++W Sbjct: 1 MSAEILSVSELTQQIKTRLETHFPQVRLKGEISNCK-RHGSGHIYLTLKDEGAQIPAVVW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K T +++ ++G++ + G++ +P S +YQ+I S+ +G G L A + +KL + Sbjct: 60 KTTASRMAVALKDGMDVIAEGRLEVYPPSGRYQLICTSVTEAGQGALQQAFAELLQKLAK 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F+ + K IP IP+II +ITS TGAVI D+ + RFP +++++PVKVQG+ + Sbjct: 120 AGYFNAERKRAIPAIPEIIGLITSSTGAVIEDMSKVFERRFPAAQLLLYPVKVQGNSAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+A AI N+ K+ RPDIII+ARGGGS+EDL FN E++ A+ NS IP+ISAIG Sbjct: 180 EVAAAIAWFNSTKKRA--HRPDIIIIARGGGSLEDLQAFNGEIVANALYNSKIPVISAIG 237 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD ADLRA TP+ AAE+AVP ++ L + NL++R + ++ ++ L+ Sbjct: 238 HETDLTIADMVADLRAGTPSIAAELAVPDRQELLRHISNLQSRQDRLLQAKLEGTERQLS 297 Query: 309 SLLKALPNSDQTLS--CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 S+ + + L RLD L ++ + + ++ +H+ + ++ + + Sbjct: 298 SICSSYAFNRPPLQMLQFHERLDSLVSQMSRAITNLFSQRVQHYAAVKQQLNTLDYRKTL 357 Query: 367 QK 368 ++ Sbjct: 358 ER 359 Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 55/132 (41%), Gaps = 3/132 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRI 427 RQ +L +++ + L+ + +++ + + ++ H + L++++ Sbjct: 267 RQELLRHISNLQSRQDRLLQAKLEGTERQLSSICSSYAFNRPPLQMLQFHERLDSLVSQM 326 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 +++ + + L + Y+ TL+RGY ++ F+T + L + + Sbjct: 327 SRAITNLFSQRVQHYAAVKQQLNTLDYRKTLERGYVLVK-KEGKFMTGSQKLKASDNVEL 385 Query: 488 NFFDGQANAIVI 499 F DG A++ Sbjct: 386 LFHDGMLPAVIS 397 >gi|312127938|ref|YP_003992812.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor hydrothermalis 108] gi|311777957|gb|ADQ07443.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor hydrothermalis 108] Length = 454 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 127/499 (25%), Positives = 210/499 (42%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N + E+SV EL+ +LK VE + L ++ ++GE+ + S H YF LKD + Sbjct: 4 SNIVSKKEWSVYELTSYLKKKVEMDVLLKNIYLKGEV--IKPSVSGEHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I + + + + G + LV G + + ++ + + G G L L++ Sbjct: 62 KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL +EGLF ++K IP PK + ++TS GA IRDIL I RF ++V I+ V Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I NT + ++II+ RGGG+ EDL FN EM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D+ L+D+ AD+RA TPT A EM V ++ L + R+ + + + Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEMVVSFQKQALEKLSEYQKRMKSAMEKTFN 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L T++ +D +L + + +R+ + R+ Sbjct: 293 TVKEKVGILQYKLYQNSPANTVAKRAQDIDLYCHKLSFAISRKLHEAHRNLKNFEKRLAD 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + R + + + + K+ + K + Sbjct: 353 LNPESRLLVARTNFDNCSRRLGEAFKKIFQQKEFAYKVNL-------------------- 392 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 L + N LKRGY+ N+ +T + Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTISQV 424 Query: 480 ATKTRILINFFDGQANAIV 498 + I+ DG + V Sbjct: 425 SNGDEIVTQLSDGIIKSKV 443 >gi|261837705|gb|ACX97471.1| large subunit of the single-stranded DNA-specific dexodeoxyribonuclease VII [Helicobacter pylori 51] Length = 420 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 121/419 (28%), Positives = 199/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKMSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMQKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--GTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWRQRLDGFNVKLHRSFKILLHQKKAHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + R + Sbjct: 357 -TERLNALENALKLAHANLKLPQFGAFVSKNNQAIELEALKRGDKIELSDEKARASATI 414 >gi|208434205|ref|YP_002265871.1| exonuclease VII, large subunit [Helicobacter pylori G27] gi|226736764|sp|B5ZA25|EX7L_HELPG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|208432134|gb|ACI27005.1| exonuclease VII, large subunit [Helicobacter pylori G27] Length = 420 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 189/383 (49%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINVQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEMVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLCRSFKTLLHQKKVHLEHLAA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L LE R ++ +I L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLTIALENKTLEFLRLKKTLLEKISIQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNRLENALKLAHANLKLPQ 378 >gi|15611313|ref|NP_222964.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori J99] gi|14194743|sp|Q9ZMH7|EX7L_HELPJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|4154774|gb|AAD05833.1| EXODEOXYRIBONUCLEASE LARGE SUBUNIT [Helicobacter pylori J99] Length = 420 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 120/409 (29%), Positives = 198/409 (48%), Gaps = 5/409 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEMVVFGGISVYAPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPNFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFY--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDSVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKTLLHQKKAHLEHLAA 300 Query: 313 ALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 +L + + +L++L L++ + K I ++ + + + Sbjct: 301 SLKRLSFENKHHLNALKLEKLTIALDNKTLEFLRLKKTLLEKISTQLSTSPFLQTKTERL 360 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + +K + K + L L+ K + Sbjct: 361 NRLENALKLAYANLKLPQFGALVSKNHQAIELEALKRGDKIELSNEKAR 409 >gi|210134457|ref|YP_002300896.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori P12] gi|226736763|sp|B6JKI8|EX7L_HELP2 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|210132425|gb|ACJ07416.1| exonuclease VII large subunit [Helicobacter pylori P12] Length = 420 Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats. Identities = 122/419 (29%), Positives = 198/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEMVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 + +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++L T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSLH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALYLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQKLDGFNVKLHRSFKILLHQKKAYLEHLAD 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + +L+ LE R ++ +I + L + + Sbjct: 301 FLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + R + Sbjct: 357 -TERLNALENALKLAHANLKLPQFGAFLSKNNQAIELEALKRGDKIELSNEKARASAEI 414 >gi|308063121|gb|ADO05008.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Sat464] Length = 420 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 120/383 (31%), Positives = 191/383 (49%), Gaps = 8/383 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 +K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--DTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNLKLHRSFKILLHQKKVHLEHLEA 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +L + +L+ LE R ++ +I + L + + Sbjct: 301 SLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLQTK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEK 395 E+ +E +K + L + Sbjct: 357 -TERLNALENALKLAHANLKLPQ 378 >gi|225388183|ref|ZP_03757907.1| hypothetical protein CLOSTASPAR_01918 [Clostridium asparagiforme DSM 15981] gi|225045741|gb|EEG55987.1| hypothetical protein CLOSTASPAR_01918 [Clostridium asparagiforme DSM 15981] Length = 398 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 118/353 (33%), Positives = 187/353 (52%), Gaps = 13/353 (3%) Query: 21 SYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78 + ++K++ + + + V+GE+S + H SGH YF+LKD S+I A+++ + F Sbjct: 1 NSYIKNMFTQDFALNKISVKGEVSNCK-YHPSGHIYFTLKDGGSQIGAVMFASQRKNLGF 59 Query: 79 LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138 EEG + + G + + KYQ+ S+ G+G L E+ + +L E G+F +K Sbjct: 60 RMEEGQQVVAEGTVDVYERDGKYQLYARSVTLDGTGDLFRRFEQLRNELEEMGMFDGCYK 119 Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQL 197 PIP K + V+T+ TGA IRDI+ + R P +++I++P VQG I I L Sbjct: 120 QPIPRYAKRVGVVTASTGAAIRDIMNISARRNPYVQLILYPALVQGAGAKYSIVKGIQTL 179 Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257 + + D+II+ RGGGSIEDLW FN+EM+ RAI P+ISA+GHETD T+AD Sbjct: 180 DRM-------NLDVIIVGRGGGSIEDLWAFNEEMVARAIFECGTPVISAVGHETDVTIAD 232 Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP-- 315 Y AD+RAPTP+ AAE+AV ++ LN + R ++ LN + L Sbjct: 233 YVADMRAPTPSAAAELAVFDYSQFEAQTDLYRRTLNRGMERRLERVRYRLNQDVLRLKMH 292 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ L+ R RL L + +E + + R++S + I + Sbjct: 293 HPERQLNEKRQRLADLEDRMGRIMERRVTAGRHRLALLAGRLQSLSPLEQISR 345 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 44/131 (33%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 R + + +L + + ++ + L R+ I+ ++ + Sbjct: 264 RRTLNRGMERRLERVRYRLNQDVLRLKMHHPERQLNEKRQRLADLEDRMGRIMERRVTAG 323 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 +++ LQS + + RGY I D + + RI + DG+A A V Sbjct: 324 RHRLALLAGRLQSLSPLEQISRGYGFITDGGGKRLESVSQVKPGDRITVRVRDGRAVARV 383 Query: 499 INKAPPKEQPT 509 ++ Sbjct: 384 EETESLDDRKG 394 >gi|154502457|ref|ZP_02039517.1| hypothetical protein RUMGNA_00270 [Ruminococcus gnavus ATCC 29149] gi|153796853|gb|EDN79273.1| hypothetical protein RUMGNA_00270 [Ruminococcus gnavus ATCC 29149] Length = 405 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 119/371 (32%), Positives = 208/371 (56%), Gaps = 13/371 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V +++ ++K++ + + + V+GE+S + H SGH YFSLKD I +++ G Sbjct: 5 IYTVKQVNAYIKNMFTQDFMLNRLYVKGEVSNCK-YHPSGHIYFSLKDESGTIACVMFAG 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + + F +EG + +V+G ++ + +YQ+ +I G+G L E KK+L E G Sbjct: 64 SRSGLSFRMQEGQQVVVLGSVSVYERDGRYQMYAREIILDGAGELYLKFEALKKELEEMG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ ++K PIP K + ++T+ +GA +RDI+ + R P +++I+ P KVQG+ + I Sbjct: 124 MFAQEYKRPIPQFVKKVGIVTASSGAAVRDIINIAARRNPYVQLILCPAKVQGEGAAESI 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I L D++I+ RGGGSIEDLW FN+E++ RAI S +P+ISA+GHE Sbjct: 184 VQGIRML-------EEQDVDVMIVGRGGGSIEDLWAFNEEIVARAIFESRVPVISAVGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD T+ADY ADLRAPTP+ AAE+AV + ++ + + RL++ +++ + L Sbjct: 237 TDTTIADYVADLRAPTPSAAAELAVYEYQAAENLMKEYQMRLSSAVLKKAEQNRQYLKQA 296 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + Q L +R L +L +E I+ +K F + ++K + + + Sbjct: 297 ALKLRLFHPRQKLLENRQYASDLELQLRSRMEEILQQKRHQFALYVEKMKGLSPLEKLNQ 356 Query: 369 NRQHILEKQQH 379 +I +++ Sbjct: 357 GYAYIEDEKGR 367 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 2/134 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 Q + E Q + V + K+ A L + + ++ + L + Sbjct: 265 QAAENLMKEYQMRLSSAVLKKAEQNRQYLKQ--AALKLRLFHPRQKLLENRQYASDLELQ 322 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ ++ ++ + L +GY I+D + Q + I Sbjct: 323 LRSRMEEILQQKRHQFALYVEKMKGLSPLEKLNQGYAYIEDEKGRPVRQIAEVKEGDAIR 382 Query: 487 INFFDGQANAIVIN 500 I DG A V Sbjct: 383 IYVSDGMIEAQVKG 396 >gi|169333803|ref|ZP_02860996.1| hypothetical protein ANASTE_00189 [Anaerofustis stercorihominis DSM 17244] gi|169259368|gb|EDS73334.1| hypothetical protein ANASTE_00189 [Anaerofustis stercorihominis DSM 17244] Length = 401 Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats. Identities = 113/364 (31%), Positives = 204/364 (56%), Gaps = 12/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +D+ +V +++ ++K +++ + LS++ V GE+S Y+ HSSGH YFS+KDN +I+ + Sbjct: 2 IDNVILTVRDVNKYIKTLLDYDELLSNLRVEGEVSNYK-RHSSGHLYFSIKDNSGKINCV 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K + F P +G++ ++ G ++ F + YQ+ ++S+ G G L + ++L Sbjct: 61 MFKSDTYSLAFEPMDGMKVIIEGYVSVFERNGNYQLYVKSMKKKGIGRLYEEYNRLLEEL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 +G F K IP +AV+TSPTGA +RDI+ I R +++I+ PV VQG+ Sbjct: 121 KAQGYFDQDKKKSIPSFVDTVAVVTSPTGAAVRDIISVIKRRNKNIKIIVCPVTVQGEGS 180 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +E+A I +N L D+II RGGGSIE+LW FN+ ++ +A+ +S+IP++SA Sbjct: 181 GEEVAQMIYDINRL------KLADVIITGRGGGSIEELWAFNERVVAQAVFDSAIPVVSA 234 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ AD RAPTP+ A E+ +++ ++ E ++NN + LI Sbjct: 235 VGHETDFTICDFVADFRAPTPSVAGEVVSEPLDNIVYTVDVYEKKINNSLKGLIDKYTEK 294 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN+++ + + + +D L ++ +L I + I S + Sbjct: 295 LNNIINKPVMKRPNAYIENMEQYIDTLKDNIDLSLYNKINLLKHKVDSSEKLIHSLSAVS 354 Query: 365 NIQK 368 +++ Sbjct: 355 VLER 358 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 1/95 (1%) Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I + +I L I+ L +KI V + +++ S + + L+RG+ ++ Sbjct: 306 RPNAYIENMEQYIDTLKDNIDLSLYNKINLLKHKVDSSEKLIHSLSAVSVLERGFAIVE- 364 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 +NN IT ++ K I I DG+ N+++ Sbjct: 365 SNNKVITSVNDVNVKDEISIRMKDGKLNSVISEIE 399 >gi|257457306|ref|ZP_05622477.1| exodeoxyribonuclease VII, large subunit [Treponema vincentii ATCC 35580] gi|257445228|gb|EEV20300.1| exodeoxyribonuclease VII, large subunit [Treponema vincentii ATCC 35580] Length = 395 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 128/367 (34%), Positives = 206/367 (56%), Gaps = 10/367 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 YS+ E++ +K + E N + + + GEIS R S+GH YF+LKD + + A+++KG Sbjct: 4 VYSIQEITGIIKSLFEQNFTSLRIAGEISNCR-PSSTGHLYFTLKDEKAALQAVMFKGRT 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + F P++G++ +V G ++ + YQ+I+E++ +G G +L LE+RK+KL EGLF Sbjct: 63 WTLGFEPKDGLKVIVSGSLSVYEQRGSYQVIVETMELAGEGAILKMLEERKQKLAREGLF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K P+PF P IAVITSPTGA +RDIL +S R + V + P VQG E +A Sbjct: 123 DQARKRPLPFFPLRIAVITSPTGAALRDILTVLSRRNSTVSVTVLPAPVQGAEAAPVLAR 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + N ++II+ RGGGS+EDL F+DE +VRA+A S IP+ISA+GHE D Sbjct: 183 QLETANR------YKLGELIIIGRGGGSLEDLLPFSDEAVVRAVAASEIPVISAVGHEID 236 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL- 311 W L D+AAD+RAPTP+ AAE+AVPV + + ++ L+ + I +++ T+ Sbjct: 237 WALTDFAADVRAPTPSAAAELAVPVLDDITGTITQLQDDMLRSIGGILERIRLTIKGFTP 296 Query: 312 KALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 ++L + + RLD L ++++ + + I+ + + Sbjct: 297 ESLEMKFRRIEQPLLMRLDDAKENLLYSMQARLTDTKHRLALLTRTIEGANPQEILNRGY 356 Query: 371 QHILEKQ 377 + ++Q Sbjct: 357 SIVYDRQ 363 Score = 79.4 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 53/159 (33%), Gaps = 6/159 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE-KIAIL 402 +++ + + + I Q+ LR I + ++ I Sbjct: 233 HEIDWALTDFAADVRAPTPSAAAELAVPVLDDITGTITQLQDDMLRSIGGILERIRLTIK 292 Query: 403 HMLREQTKNRIFYLHT----HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 E + + + + + + + ++ +++ TR ++ + L Sbjct: 293 GFTPESLEMKFRRIEQPLLMRLDDAKENLLYSMQARLTDTKHRLALLTRTIEGANPQEIL 352 Query: 459 KRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANA 496 RGY+ + D + + ++ A R+ I DG+ A Sbjct: 353 NRGYSIVYDRQTGLVLRRTQDAAAAGRLRIKLADGEIAA 391 >gi|319937359|ref|ZP_08011766.1| exodeoxyribonuclease 7 large subunit [Coprobacillus sp. 29_1] gi|319807725|gb|EFW04318.1| exodeoxyribonuclease 7 large subunit [Coprobacillus sp. 29_1] Length = 416 Score = 274 bits (700), Expect = 3e-71, Method: Composition-based stats. Identities = 131/396 (33%), Positives = 211/396 (53%), Gaps = 14/396 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ SV L+ ++K + + L +V ++GEIS YR SGH YF+LKD +SR+ AI Sbjct: 1 MERQYISVFALNKYIKAKMNQDVSLQNVYIKGEISNYRPHP-SGHLYFTLKDENSRVSAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ K+ F E G++ + ++ + S +YQ+ ++++ G G L E K+KL Sbjct: 60 MFASAARKMSFQIENGMQVFIHASVSVYEASGQYQLYVQTIQQDGIGNLYLQYEALKRKL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 +EGLF ++K I PK IAV+++ GA ++DI++ I RFP +VI+FP+ VQG Sbjct: 120 EKEGLFDLKYKQSIRSFPKGIAVLSAKQGAAVQDIVRTIHLRFPFAKVIVFPIPVQGKNA 179 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 +I + Q++TL D IILARGGGSIEDLW+FN+E + R + PII+ Sbjct: 180 YLQIIETLKQVDTL-------GFDTIILARGGGSIEDLWNFNEEDLARCVFACQTPIITG 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHETD+T+ D+ +D R+ TPT AA A P ++ L+ NL+ +L + + + Sbjct: 233 IGHETDFTICDFVSDYRSATPTAAAVKATPDQKELRVYQENLQRQLLYKMKHRLDVQRQY 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-FLI 363 L+ L + L N + S RL +L +L + ++ R Y+ +K+ L Sbjct: 293 LSRLQQSYYLNNPEVIYSHEFLRLTKLQDKLSYQFKVFDMRVYQQLASYQTELKNQIDLK 352 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 +++ H +K R L +KEK Sbjct: 353 LQAYEHQLHQHITTLDALSPLKVLQRGYTLIQKEKT 388 >gi|317008909|gb|ADU79489.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori India7] Length = 420 Score = 274 bits (700), Expect = 3e-71, Method: Composition-based stats. Identities = 123/419 (29%), Positives = 198/419 (47%), Gaps = 8/419 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 HK P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKAHKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 +I ++ T D +++ARGGGS+EDL+ FNDE IV A+ + +SAIGHE+D Sbjct: 183 SIAYADSFH--NTKNAFDAVVVARGGGSMEDLYSFNDEKIVEALYWAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D AADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLAADLRASTPSNAMEILLPNSDEWLQRLDGFHLKLHRSFKILLHQKKAHLEHLAD 300 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + +L+ LE R ++ +I + L + Sbjct: 301 FLKRLS--FENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSPFLLAK-- 356 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 E+ +E +K + L + + + + + + R + Sbjct: 357 -TERLNALENALKLAHANLKLPQFGALVSKNNQAIELEALKRGDKIELNNEKARASAEI 414 >gi|219847837|ref|YP_002462270.1| exodeoxyribonuclease VII large subunit [Chloroflexus aggregans DSM 9485] gi|219542096|gb|ACL23834.1| exodeoxyribonuclease VII, large subunit [Chloroflexus aggregans DSM 9485] Length = 397 Score = 274 bits (700), Expect = 3e-71, Method: Composition-based stats. Identities = 115/360 (31%), Positives = 188/360 (52%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +VS+L+ L+ +E + + E+ +R SGH YF+LKD + I A++W+G Sbjct: 3 VLTVSDLNSALRAHLEGEGLFFDLWLLAEVVEFRRYP-SGHCYFTLKDEQASIRAVLWRG 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 +I LP G LV G++ + + Q +++ ++P+G G L L + + +L EG Sbjct: 62 VAERIATLPTNGDAVLVHGRVGFYEARGELQFVVDQIVPAGVGLLNAQLAQLRARLEAEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 LF ++ K P+P +P+ I ++TS A ++D+L + R+PL V++ P VQG+ P I Sbjct: 122 LFDERRKRPLPPLPRRIGIVTSLQAAALQDMLTILRRRYPLAEVLLSPCLVQGELAPASI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ ++ T D++ILARGGG+ EDL FNDE +VR +A S +PII+ +GHE Sbjct: 182 VAALRRVYT-------EAVDLVILARGGGASEDLAAFNDEQVVRTVAASPVPIITGVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TL D ADLRAPTP+ AAEMA P L+ ++ L R II + + + Sbjct: 235 TDTTLVDAVADLRAPTPSAAAEMAAPPLTELRQRVLALHERATVAIIDRLHRQRQMVAQQ 294 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + +T+ +R +D L R + + + R+ + + + Sbjct: 295 HALLQRNHPHRTIEAARQTVDDLSRRAGRAFGRWLQLEQTRLQGLQARLATLSPQATLAR 354 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 2/133 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + RQ +L + + L ++ A+L R I + L Sbjct: 262 LTELRQRVLALHERATVAIIDRLHRQRQMVAQQHALLQ--RNHPHRTIEAARQTVDDLSR 319 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R ++ T + L + + + TL RGY Q + + +T + + Sbjct: 320 RAGRAFGRWLQLEQTRLQGLQARLATLSPQATLARGYAIAQQVDGHVVTDPAQVQAGEAL 379 Query: 486 LINFFDGQANAIV 498 + G+ IV Sbjct: 380 TLTVRAGRVRVIV 392 >gi|312877546|ref|ZP_07737506.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor lactoaceticus 6A] gi|311795687|gb|EFR12056.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor lactoaceticus 6A] Length = 454 Score = 273 bits (699), Expect = 3e-71, Method: Composition-based stats. Identities = 125/499 (25%), Positives = 208/499 (41%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N L E+SV EL+ +LK VE + L + ++GE+ + S H YF LKD + Sbjct: 4 NNILSKKEWSVYELTSYLKKKVEMDVLLKSIYLKGEV--IKPSVSGEHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I + + + + G + LV G + + ++ + + G G L L++ Sbjct: 62 KIKCVFFWFDKS---VEIKHGSKVLVKGNVIFYEKEGIIELKVSEITDIGLGELFVKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL +EGLF ++K IP PK + ++TS GA +RDIL I RF ++V I+ V Sbjct: 119 LEEKLRQEGLFDSKYKKEIPRYPKKVGIVTSKNGAAVRDILNTIYTRFENIQVYIYSCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I NT + ++II+ RGGG+ EDL FN EM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNTAEP------VEVIIVGRGGGAFEDLMAFNSEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D+ L+D+ AD+RA TPT A E+ V + L + R+ + + +++ Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEIVVSFQNQALEKLNEYQKRMKSAMEKILN 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L T++ + +L + + +R+ + R+ Sbjct: 293 MVKEKVGILQYKLYQNSPANTIAKRAQDISLYSHKLSFAINKKLHESHRNLKNFEKRLAD 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + R + + + + K+ + K + Sbjct: 353 RNPESRLSVARTNFDNCSRRLGEAFKKIFQQKEFAYKVNL-------------------- 392 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 L + N LKRGY+ N+ +T + Sbjct: 393 ---------------------------EKLIALNPLNVLKRGYSITLH-NSKILTTISQV 424 Query: 480 ATKTRILINFFDGQANAIV 498 I+ DG + V Sbjct: 425 NNGDEIVTQLSDGIIKSKV 443 >gi|313114143|ref|ZP_07799695.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310623552|gb|EFQ06955.1| exodeoxyribonuclease VII, large subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 404 Score = 273 bits (699), Expect = 4e-71, Method: Composition-based stats. Identities = 122/358 (34%), Positives = 198/358 (55%), Gaps = 11/358 (3%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS L+ ++K +++ L + +RGEI+ + SGH YFSL+D+ + A++++ Sbjct: 3 TVSALNRYVKTLLDANDTLFDLALRGEIANFVQNARSGHCYFSLRDDVCSVKAVMFRTDA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PEEG+ +V + T + +Q+ + + P G G ALE+ K KL +EGLF Sbjct: 63 RRLAFRPEEGMRVVVRCRATLYERDGTFQLYVNDMFPDGIGAAQLALEQLKAKLEQEGLF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + +HK P+P PK I V+TS TGA ++DI ++ R+P +R+++ PV VQG E +++A+ Sbjct: 123 APEHKKPLPEFPKCIGVVTSKTGAALQDIRNVLTRRWPSVRLLLCPVTVQGFEAAQQVAD 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI +L+ KE D II+ARGGGS EDLW FN EMI RA P+ISAIGHE D Sbjct: 183 AIKKLDQRKE------VDEIIVARGGGSREDLWVFNAEMIARAAYRCKKPLISAIGHEID 236 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+ D+ AD RAPTP+ AAE+AVP + + L++L+ + + + N L Sbjct: 237 YTILDFVADCRAPTPSAAAELAVPDRAEQERILLDLQQNIRKNMQKRFDLCYNGLEQYNF 296 Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + S+ +L ++ + ++ + H S + + Sbjct: 297 VLEQGLARRNWQKSQGQLQQVQDAIRQQMQKRLHSAELQLGHAAALTGSLDPYKVLAR 354 Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 47/136 (34%), Gaps = 3/136 (2%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + +L+ QQ+I + +++ + ++ +L + ++++ Sbjct: 263 AEQERILLDLQQNIRKNMQKRFDLCYNGLEQYNFVLEQGLAR--RNWQKSQGQLQQVQDA 320 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 I + ++ S + + S L RGYT + N + +L + I Sbjct: 321 IRQQMQKRLHSAELQLGHAAALTGSLDPYKVLARGYTMVTAANGTIL-NADDLQPEKTIY 379 Query: 487 INFFDGQANAIVINKA 502 + +A V Sbjct: 380 VRSASRRAKCRVEAVE 395 >gi|207108441|ref|ZP_03242603.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori HPKX_438_CA4C1] Length = 339 Score = 273 bits (699), Expect = 4e-71, Method: Composition-based stats. Identities = 109/304 (35%), Positives = 166/304 (54%), Gaps = 3/304 (0%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S S HAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSSHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 ++K P P PK +AVITS A D+ + S R+P+ ++ +QG+ C + + Sbjct: 123 DKENKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVE 182 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D Sbjct: 183 GIAYADSFH--GTKNAFDAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD 240 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 + L+D ADLRA TP+ A E+ +P + L +L+ L+ K L L Sbjct: 241 FLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAA 300 Query: 313 ALPN 316 +L Sbjct: 301 SLKR 304 >gi|88607196|ref|YP_505831.1| exodeoxyribonuclease VII, large subunit [Anaplasma phagocytophilum HZ] gi|123494204|sp|Q2GIH0|EX7L_ANAPZ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|88598259|gb|ABD43729.1| exodeoxyribonuclease VII, large subunit [Anaplasma phagocytophilum HZ] Length = 398 Score = 273 bits (699), Expect = 4e-71, Method: Composition-based stats. Identities = 141/356 (39%), Positives = 208/356 (58%), Gaps = 10/356 (2%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 S D PE++V+E++ L+ ++ + VRGEISG +SGH YF+LKD++S I+A+ Sbjct: 10 SNDIPEFTVTEITGVLQRFMQETFYSIKVRGEISGL-SRPNSGHVYFTLKDSNSVINAVC 68 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W GT +++ +G+E + G ++ + SKYQ+I+ + +G G L L + KKKL Sbjct: 69 WNGT--RLKVQFCDGLEVVCTGYLSVY--QSKYQLIVTDMTLAGYGKLAAMLAELKKKLE 124 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EGLFS K +PF+P I VITSPTGAVI DI+ R+ RFP V+++PV+VQGD Sbjct: 125 LEGLFSPARKKKLPFLPTKIGVITSPTGAVISDIISRVKQRFPSNVVVWPVQVQGDRASA 184 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + AI N+ + P +II+ARGGGS EDLW FNDE + R +A S IPI+SAIG Sbjct: 185 MVIEAIKGFNSFAD-----PPHVIIVARGGGSFEDLWPFNDEELARTVAASKIPIVSAIG 239 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+T+ DYAADLRA TPT A E+ +P K L +S+ R R++K + L Sbjct: 240 HETDFTIIDYAADLRASTPTAAVELVLPEKSKLVASINEKFVRTKISFERIVKMQEYRLL 299 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L +L +++ + L++ + RK ++ ++ R+ H Sbjct: 300 RLHGILTEKKNSLLQKSRVALEYQQKIRYLLQVSLLRKRQYLESLMQRLSYYDSKH 355 Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 47/115 (40%) Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 K I ++ ++ LH + + KN + + +I ++L + + Sbjct: 284 KISFERIVKMQEYRLLRLHGILTEKKNSLLQKSRVALEYQQKIRYLLQVSLLRKRQYLES 343 Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + L + K+ L GY ++D + I+ L+T I I DG+ AI+I Sbjct: 344 LMQRLSYYDSKHILSVGYAIVRDEHEKQISSVEALSTNDTITIELKDGKRRAIII 398 >gi|207725157|ref|YP_002255554.1| hypothetical exodeoxyribonuclease vII large subunit (partial sequence n terminus) protein [Ralstonia solanacearum MolK2] gi|206590390|emb|CAQ37351.1| hypothetical exodeoxyribonuclease vII large subunit (partial sequence n terminus) protein [Ralstonia solanacearum MolK2] Length = 360 Score = 273 bits (699), Expect = 4e-71, Method: Composition-based stats. Identities = 108/311 (34%), Positives = 163/311 (52%), Gaps = 8/311 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ + ++E + + VRGEIS + SGH YFSLKD ++I +++KG Sbjct: 41 VLSVSEVNRRIAGLLERHFALGWVRGEISNFT-RAGSGHWYFSLKDAGAQIRCVMFKGRN 99 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +F P EG V +T + + Q+ +E++ +G G L A + K L +GLF Sbjct: 100 QYADFTPREGEAVEVRAVVTLYEARGELQLSVEAIRRAGLGNLYEAFLRLKAALEAQGLF 159 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K P+P P I V+TS A +RD+L + R + V+++PV VQG + IA Sbjct: 160 DAARKRPLPRHPHAIGVVTSLQAAALRDVLTTLRRRAPHVPVVVYPVPVQGAGAAERIAA 219 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 + +N E D+IIL RGGGSIEDLW FN+E + RA+A S +PI++ +GHETD Sbjct: 220 MLDIVNARAE------VDVIILCRGGGSIEDLWAFNEEPVARAVAASDLPIVAGVGHETD 273 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ D+ AD+RAPTPTGAAE+ P + + + L+ + R + Sbjct: 274 VTIVDFVADVRAPTPTGAAELVSPDRARMLRDVALCWDALSATLRRQLGPPRPDGRMAGP 333 Query: 313 ALPNSDQTLSC 323 + Sbjct: 334 PPAQPASAHAR 344 >gi|300173627|ref|YP_003772793.1| exodeoxyribonuclease VII large subunit [Leuconostoc gasicomitatum LMG 18811] gi|299888006|emb|CBL91974.1| Exodeoxyribonuclease VII, large subunit [Leuconostoc gasicomitatum LMG 18811] Length = 428 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 149/502 (29%), Positives = 235/502 (46%), Gaps = 88/502 (17%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRI 64 S ++S L+ +LK +++ L V + GEIS G H YFS+KD + + I Sbjct: 2 SETRKYLTISALTSYLKRKFDADPYLEKVYLTGEISNM-GRRRGRHLYFSMKDPNGGAVI 60 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 A ++ N+++F PEEG++ IG++ + S Y II+E + P G G L A E+ K Sbjct: 61 SAAMF-SYANRLKFEPEEGMKINAIGRVQIYEPSGTYSIILEQMTPDGIGELFLAYEQLK 119 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 KL +EGLF+ K +P PK IAV+TSPTGAVI DI + + R+P ++++FP VQG Sbjct: 120 NKLSQEGLFNLPKKK-LPTFPKKIAVVTSPTGAVIEDITRTVQRRYPSAQIVLFPAVVQG 178 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ I IL+++ L D +I+ RGGGSIEDLW FNDE + R IA + IPI Sbjct: 179 EKAAATIIQQILRIDEL------GDYDTLIVGRGGGSIEDLWAFNDEKLARVIAAARIPI 232 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKY 302 IS++GHETD TL D+ AD RA TPT AAE++ PV E + S L L+ RLN + +L+ Sbjct: 233 ISSVGHETDNTLVDFVADQRAATPTAAAELSTPVTLEQVISRLNELQIRLNLRMKQLVDV 292 Query: 303 KINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + D+ + R+D+L Sbjct: 293 RRQRVERITQHIIFQQPDRLYTGYNQRVDQLCHT-------------------------- 326 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 Q ++Q +K + L + ++ + +L Q + + + + Sbjct: 327 ---------------LTQVLQQRLKTTKHQLMLLLQRQLQVRQILLRQPQEHVQLMAAKL 371 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L+ KRGY I+ ++ + ++ Sbjct: 372 D-----------------------LVSPLKIL------KRGYVLIE-KDSQVVRTINDVQ 401 Query: 481 TKTRILINFFDGQANAIVINKA 502 I + F DG A A +I + Sbjct: 402 RNDTIDLRFSDGMAKAKIIETS 423 >gi|109947858|ref|YP_665086.1| exodeoxyribonuclease VII large subunit [Helicobacter acinonychis str. Sheeba] gi|123173279|sp|Q17W89|EX7L_HELAH RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|109715079|emb|CAK00087.1| exodeoxyribonuclease VII large subunit [Helicobacter acinonychis str. Sheeba] Length = 420 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 121/389 (31%), Positives = 193/389 (49%), Gaps = 6/389 (1%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++G + Sbjct: 4 LSVSEINAKIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCTLFRGNAS 63 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++F +EG E V G I+ +P YQI + P G+L ALE+ K+KL +G F Sbjct: 64 KLKFALKEGQEVAVFGAISVYPPRGDYQINCFEIEPKDWGSLALALEQLKEKLRLKGYFD 123 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 ++K P P PK +A+ITS A D+ + R+P+ ++ +QG+ C + + + Sbjct: 124 KENKLPKPSFPKRVAIITSQNSAAWADMQKIAFKRWPMCELVCINTLMQGEGCVQSVVES 183 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D+ Sbjct: 184 IAYADSFY--NTRNAFDAIVVARGGGSMEDLYSFNDERIADALHLAKTFSMSAIGHESDF 241 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D ADLRA TP+ A E+ +P E Q L +L L+ K L L + Sbjct: 242 LLSDSVADLRASTPSNAMEILLPSSEEWQQKLDGFNLKLQRSFKILLHQKKVHLEHLAAS 301 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + + +L++L LE+ + K I ++ S + R Sbjct: 302 LKRLSFENKHHLNSLKLEKLKIALENKTLEFLRLKKTLLEKISTQL-STSPFLQTKTERL 360 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + L+ + + ++ K A Sbjct: 361 NALDNALKLAHAHLKLPKFGAFVSKNNQA 389 >gi|326317448|ref|YP_004235120.1| exodeoxyribonuclease VII large subunit [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374284|gb|ADX46553.1| exodeoxyribonuclease VII, large subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 437 Score = 273 bits (698), Expect = 5e-71, Method: Composition-based stats. Identities = 119/383 (31%), Positives = 194/383 (50%), Gaps = 7/383 (1%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + V L + +E+ + V VRGEI+G+ SSGH YFS+KD +I Sbjct: 5 PDPASAPRIWDVGALCRAVADALEARFNPVAVRGEITGF-SRASSGHCYFSIKDGQGQIR 63 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ ++ P +G + G++ + Q+I+ESL +G G L + K Sbjct: 64 CAMFRRAAMLLDGTPRDGEMVELRGRLAVYEARGDLQLIVESLQRAGQGALFEQFLRLKA 123 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L EGLF K +P +P+ I ++TSP A + D++ + R P L V++ P VQG Sbjct: 124 RLESEGLFDSARKRGLPVMPRSIGLVTSPGAAALHDVVTALRRRVPHLPVVLAPALVQGA 183 Query: 185 ECPKEIANAILQLNTLKE----GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 P I A+ L + E G P ++I+L RGGGSIEDLW FNDE + R +A S Sbjct: 184 AAPASICAALHALYRMAEPSGDGAGHPPVEVILLVRGGGSIEDLWAFNDEQVARTLAKSP 243 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P++S +GHETD+T+AD+ ADLRAPTPT AAE+ + + + L RL++ + R I Sbjct: 244 VPVVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPQATWLAGMDALAGRLSDSLQRQI 303 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ + L ++ RL RL ++L H R + + + +R+ Sbjct: 304 DGRHQRLDMAAQRLGRPSGLVARQELRLARLAQQLRHGAAWTARRCAQRQDGLADRL-PK 362 Query: 361 FLIHNIQKNRQHILEKQQHIEQI 383 + + + Q + +E + Sbjct: 363 AVAQGVARQAQRLDHAALRLELL 385 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 4/141 (2%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 SD L I Q + Q + + R + + LR Sbjct: 296 SDSLQRQIDGRHQRLDMAAQRLGRPSGLVARQELRLAR----LAQQLRHGAAWTARRCAQ 351 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 L R+ ++ + + L+ + L+RGY + D+ +T+ Sbjct: 352 RQDGLADRLPKAVAQGVARQAQRLDHAALRLELLDPRLVLQRGYALLTDSEGLPVTRTAQ 411 Query: 479 LATKTRILINFFDGQANAIVI 499 + T + DG+ + V Sbjct: 412 VRTGDAVRAAVSDGEIDLTVS 432 >gi|260438373|ref|ZP_05792189.1| exodeoxyribonuclease VII, large subunit [Butyrivibrio crossotus DSM 2876] gi|292808959|gb|EFF68164.1| exodeoxyribonuclease VII, large subunit [Butyrivibrio crossotus DSM 2876] Length = 407 Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats. Identities = 117/362 (32%), Positives = 196/362 (54%), Gaps = 14/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 Y+V +++ ++K++ +++ ++ ++GEIS + H+SGH YF+LKD S I A+++ Sbjct: 2 ANIYTVLQINSYIKNMFDTDFVLKNINIQGEISNLK-YHTSGHIYFTLKDKDSTISAVMF 60 Query: 70 KG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 G + + F +G++ +V G I+ F S KYQI + +GSG L K +L Sbjct: 61 AGSRMKGLNFRLRDGMKVVVTGNISVFEASGKYQIYAREIKETGSGELYERFVNLKNELE 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E G+F + +K PIP K + V+T+ TGA + DI+ R P + +I++P KVQG+ Sbjct: 121 EMGMFDEIYKKPIPKNIKRLGVVTARTGAAVHDIISVSRRRNPGIDIILYPAKVQGEGAA 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + + I L+ D+II+ RGGGSIEDLW FN+E + R + N + P+ISA+ Sbjct: 181 ESVCTGIRFLDKA-------GVDLIIVGRGGGSIEDLWAFNEECVAREVFNCNTPVISAV 233 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD+T+ D+ +DLRAPTP+ AAE+AV ++ L+ L A LN I +K + + Sbjct: 234 GHETDFTIIDFVSDLRAPTPSAAAELAVSDVSKIRDRLLELNAGLNIRINGFLKNYSDRI 293 Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S L + L L +L +++ ++ F + R+ + Sbjct: 294 ASYNVKLNYLSPANILEARENLLRNYYYKLNNSINAVMKNYTSVFQILCTRLDGLSPLTR 353 Query: 366 IQ 367 ++ Sbjct: 354 LK 355 Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 16/158 (10%), Positives = 47/158 (29%), Gaps = 5/158 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL-----HMLREQT 409 + +++ + + + + + ++ I K + + Sbjct: 246 SDLRAPTPSAAAELAVSDVSKIRDRLLELNAGLNIRINGFLKNYSDRIASYNVKLNYLSP 305 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 N + ++ ++ ++ +K+ + I L + LK GY+ + D Sbjct: 306 ANILEARENLLRNYYYKLNNSINAVMKNYTSVFQILCTRLDGLSPLTRLKGGYSYVCDEG 365 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 + I ++ + I DG A + Sbjct: 366 GSNINSVEDIRPDDTLNIYVTDGIITATAKKITKKEGT 403 >gi|307353977|ref|YP_003895028.1| exodeoxyribonuclease VII large subunit [Methanoplanus petrolearius DSM 11571] gi|307157210|gb|ADN36590.1| exodeoxyribonuclease VII, large subunit [Methanoplanus petrolearius DSM 11571] Length = 413 Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats. Identities = 121/370 (32%), Positives = 202/370 (54%), Gaps = 16/370 (4%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESN-LSHVCVRGEISGYRGIHSSGHAYFSLKDN---- 60 +++S ++ SVSE+S +K ++ + L + + GE++ + H+SGH YFS+ ++ Sbjct: 7 EEDSGENKIKSVSEISAIIKSRLDDDSLRGIWIEGEMTNLKN-HASGHLYFSMTESVYGR 65 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I+ +W+ + ++ F PE G++ G + + KYQ I+ L +G+G + Sbjct: 66 EYLINCAMWRSSAREVGFRPENGMKVRAYGSVEVYEPHGKYQFIVRELSAAGAGDKHFLV 125 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+ K++L EEGLF + K +P P+ + V++SP+GA RDI IS R+P+ +I+ P Sbjct: 126 ERWKRELAEEGLFDEVFKKMLPQFPRKVGVVSSPSGAARRDIENVISRRYPVEIILSPAL 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD +IA AI +++ L D+II+ RGGGS EDL+ FN +VRA+ Sbjct: 186 VQGDNAHADIARAIRRIDGL--------VDVIIVGRGGGSFEDLFPFNHPDVVRAVFECK 237 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SA+GHE D+TL D AAD+RAPTP+ AAE+ VP + L++ L + E L N + I Sbjct: 238 TPVVSAVGHEIDFTLVDLAADVRAPTPSAAAEIVVPDRCELENQLRSYEKTLMNSVTDRI 297 Query: 301 KYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L L +Q ++ RLD L L H++ I R+ + + Sbjct: 298 TRERELLEGFRLRLQPKKFEQLINEEFQRLDDLFGRLNHSMNGYIERQRMSLGLLRASLA 357 Query: 359 SDFLIHNIQK 368 + +++ Sbjct: 358 ASDPKKPLER 367 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 56/164 (34%), Gaps = 6/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + E + + K + + + +L Sbjct: 246 HEIDFTLVDLAADVRAPTPSAAAEIVVPDRCELENQLRSYEKTLMNSVTDRITRERELLE 305 Query: 404 MLREQTKNR-----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 R + + + I + L R+ ++ I+ S+ + L + K L Sbjct: 306 GFRLRLQPKKFEQLINEEFQRLDDLFGRLNHSMNGYIERQRMSLGLLRASLAASDPKKPL 365 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 +RGY ++ N++ + +L R+ I DG+ A++ + Sbjct: 366 ERGYCIVR-KNDSVVRSAADLFRDDRVEIVLKDGECKAVIEDVN 408 >gi|163849261|ref|YP_001637305.1| exodeoxyribonuclease VII large subunit [Chloroflexus aurantiacus J-10-fl] gi|222527251|ref|YP_002571722.1| exodeoxyribonuclease VII large subunit [Chloroflexus sp. Y-400-fl] gi|163670550|gb|ABY36916.1| exodeoxyribonuclease VII, large subunit [Chloroflexus aurantiacus J-10-fl] gi|222451130|gb|ACM55396.1| exodeoxyribonuclease VII, large subunit [Chloroflexus sp. Y-400-fl] Length = 397 Score = 273 bits (697), Expect = 7e-71, Method: Composition-based stats. Identities = 111/359 (30%), Positives = 188/359 (52%), Gaps = 13/359 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 ++VS+L+ L+ +E + + E+ +R SGH YF+LKD + I A++W+ Sbjct: 4 FTVSDLNSALRAHLEDEGLFFDIWLLAEVVEFRRYP-SGHCYFTLKDEQASIRAVLWRSK 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +I LP G L G++ + + Q +++ ++P+G G L LE + +L EGL Sbjct: 63 AEQIALLPANGDAVLAHGRVGFYEARGELQFVVDQIVPAGVGLLNAQLEHLRARLEAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F ++ K +P +P+ I ++TSP A ++D+L + R+PL VI+ P VQG+ P I Sbjct: 123 FDERRKRLLPVLPRRIGIVTSPQAAALQDMLTILRRRYPLAEVILSPCLVQGELAPASIV 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ + D+IILARGGG+ +DL FNDE +VR +A S +PII+ +GHET Sbjct: 183 AALRRAYA-------EPLDVIILARGGGASDDLAAFNDEQVVRTVAASPVPIITGVGHET 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TL D AD+RAPTP+ AAE+ P L+ +I+L R ++ I + + + Sbjct: 236 DTTLVDAVADVRAPTPSAAAELVAPPLADLRQRVIDLRERAEVALLTGIDAQRSEVARQR 295 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + L +R +D L L+ + + + + +R+ + + + Sbjct: 296 LLLQRHHPRRRLDAARQTIDDLMLRLDRAFSRWLQLERTRLHGLHSRLNTLSPQATLAR 354 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + RQ +++ ++ E + + E L + R + R+ I L+ Sbjct: 262 LADLRQRVIDLRERAEVALLTGIDAQRSEVAR--QRLLLQRHHPRRRLDAARQTIDDLML 319 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R++ S ++ T + L + + + TL RGY Q + IT + T RI Sbjct: 320 RLDRAFSRWLQLERTRLHGLHSRLNTLSPQATLARGYAIAQHADGRVITDSSQVQTGERI 379 Query: 486 LINFFDGQANAIVINKA 502 + G +A V + Sbjct: 380 ALTLRAGIVHATVESTN 396 >gi|223038616|ref|ZP_03608909.1| exodeoxyribonuclease VII, large subunit [Campylobacter rectus RM3267] gi|222880018|gb|EEF15106.1| exodeoxyribonuclease VII, large subunit [Campylobacter rectus RM3267] Length = 387 Score = 273 bits (697), Expect = 7e-71, Method: Composition-based stats. Identities = 120/344 (34%), Positives = 183/344 (53%), Gaps = 11/344 (3%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ K ++E+ S+V V GEIS H SGH YF+LKD + I A+I+K Sbjct: 2 LSVSELNEQAKTLLETTFSYVEVGGEISRLV-KHGSGHWYFTLKDEKAAISAVIYKFNAA 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++F +G++ + GKI+ + S YQ I + PSG G L A ++ K +L EGLF Sbjct: 61 KLKFDVADGMKVALYGKISLYSPSGSYQFIATLIRPSGEGELELAFKQLKARLESEGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANA 193 K P+P P+ IA++TS T A ++D+L+ S R+ P +I+F QG+ P + A Sbjct: 121 ISRKKPLPKFPRKIALVTSKTSAALQDMLRIASQRWAPAEIIVFDSLTQGETAPASLIRA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + +T D I+LARGGGS EDLW FNDE + R I + P+ISA+GHE D+ Sbjct: 181 LKRADTS-------GADAIVLARGGGSREDLWCFNDENLAREIYAARTPVISAVGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+AAD RAPTP+ A +P L S+ L + +R+ + K N L + Sbjct: 234 VISDFAADFRAPTPSAAMAALLPDAGELMQSIDRLSEAADAAFMRVWERKFNALAMMRAR 293 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + +Q ++ L L + L+ + + + Sbjct: 294 FSQASLEQKIARKEQILLNLRQVLDAAAQTKLLKFENALKLARA 337 >gi|169831183|ref|YP_001717165.1| exodeoxyribonuclease VII, large subunit [Candidatus Desulforudis audaxviator MP104C] gi|226694646|sp|B1I3J0|EX7L_DESAP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|169638027|gb|ACA59533.1| exodeoxyribonuclease VII, large subunit [Candidatus Desulforudis audaxviator MP104C] Length = 406 Score = 273 bits (697), Expect = 7e-71, Method: Composition-based stats. Identities = 124/372 (33%), Positives = 193/372 (51%), Gaps = 12/372 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV EL+ ++K +ES+ L+HV VRGE+S H SGH YF LKD +RI ++++ + Sbjct: 9 SVRELTGYIKERLESDPFLAHVWVRGEVSACT-RHPSGHLYFFLKDEAARIRVVMFRSQV 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 +++ E G +V G + + + +YQ+ + G+G L ALE+ K+KL EGLF Sbjct: 68 SRLGVPLENGTTVVVRGYLGVYERNGEYQLYAQGAEAEGAGKLHAALERLKEKLQREGLF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIAN 192 K +P +P + V+TSP GA ++DIL + R+ P RV++ PV VQG+ P EIA Sbjct: 128 DPARKRALPALPDTVGVVTSPVGAALKDILTIMRRRWPPARVLLAPVSVQGETAPYEIAQ 187 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI LN D+II+ RGGG+ E+L FN E++ RAI S IP++SA+GHE D Sbjct: 188 AIRALN------GAGGVDVIIVGRGGGAPEELAAFNTEVVARAIFESRIPVVSAVGHEKD 241 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD AD RAPTP+ AAE VP + ++ L +E+RL + + L +L + Sbjct: 242 VTVADLVADWRAPTPSAAAEAVVPDQRAVRERLAAVESRLGRAVRHRLAVYRVRLEALRQ 301 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + R + L L + + R+++ + + + Sbjct: 302 RPVMASPGVLCRRRREVVRSLEERLGGAIGRRTGEGRSRLAVLSGRLEALSPLQVLARGY 361 Query: 371 QHILEKQQHIEQ 382 I + Sbjct: 362 SICRRADGRIVR 373 Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 47/136 (34%), Gaps = 2/136 (1%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R+ + + + + V R + + + ++ L R+ Sbjct: 271 RERLAAVESRLGRAV--RHRLAVYRVRLEALRQRPVMASPGVLCRRRREVVRSLEERLGG 328 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + + + +++ + L++ + L RGY+ + + + ++ R++I Sbjct: 329 AIGRRTGEGRSRLAVLSGRLEALSPLQVLARGYSICRRADGRIVRDADGVSPGERVIIWL 388 Query: 490 FDGQANAIVINKAPPK 505 G + +V P + Sbjct: 389 HAGGLSCLVEETFPSR 404 >gi|317010539|gb|ADU84286.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori SouthAfrica7] Length = 420 Score = 272 bits (696), Expect = 8e-71, Method: Composition-based stats. Identities = 122/408 (29%), Positives = 197/408 (48%), Gaps = 5/408 (1%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++G + Sbjct: 4 LSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCTLFRGNAS 63 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++F +EG E V G I+ +P YQI + P G+L ALE+ K+KL +G F Sbjct: 64 KLKFALKEGQEVAVFGAISVYPPRGDYQINCFEIEPKDWGSLALALEQLKEKLRLKGYFD 123 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 ++K P P PK +AVITS A D+ + R+P+ ++ +QG+ C + + + Sbjct: 124 KKNKLPKPSFPKRVAVITSQNSAAWADMQKIAFKRWPMCELVCINTLMQGEGCVQSVVES 183 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I ++ T D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D+ Sbjct: 184 IAYADSFH--NTKNAFDAIVVARGGGSMEDLYSFNDERIADALHLAKTFSMSAIGHESDF 241 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D ADLRA TP+ A E+ +P E Q L +L L+ K L L + Sbjct: 242 LLSDSVADLRASTPSNAMEILLPSSEEWQQKLDEFNLKLQRSFKILLHQKRVHLEHLAAS 301 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + + +L++L LE+ + K I ++ + + + Sbjct: 302 LKRLSFENKHHLNSLKLEKLKIALENKTLEFLRLKKTLLEKISTQLSTSPFLQTKTERLN 361 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + +K F+ K + L L+ + + Sbjct: 362 RLDNALKLAHAHLKLPKFGAFVSKNNQAVELEALKMGDRIELSNEKAR 409 >gi|160945197|ref|ZP_02092423.1| hypothetical protein FAEPRAM212_02716 [Faecalibacterium prausnitzii M21/2] gi|158442928|gb|EDP19933.1| hypothetical protein FAEPRAM212_02716 [Faecalibacterium prausnitzii M21/2] Length = 407 Score = 272 bits (696), Expect = 9e-71, Method: Composition-based stats. Identities = 129/407 (31%), Positives = 213/407 (52%), Gaps = 17/407 (4%) Query: 16 SVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS+L++++K +++ L + +RGEI+ + SGH YFSL+D+ + A++++ Sbjct: 6 SVSDLNHYVKTLLDVNDGLFDLALRGEIANFVQNARSGHCYFSLRDDACSVKAVMFRTDA 65 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++ F PEEG+ +V + T + +Q+ + + P G G ALE+ K +L +EGLF Sbjct: 66 RRLAFRPEEGMRVVVRCRATLYERDGAFQVYVNEMFPDGLGAAQLALEQLKARLEKEGLF 125 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +K P+P P+ I V+TS TGA ++DI IS R+P +R+++ PV VQG E ++IA Sbjct: 126 DPVYKKPLPAYPECIGVVTSKTGAALQDIRNVISRRWPSVRLLLCPVTVQGFEAARQIAA 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 AI L+ + D II+ARGGGS EDLW FN E I RA P+ISAIGHE D Sbjct: 186 AIRTLDQ------SGKVDEIIVARGGGSREDLWVFNAEEIARAAFRCKTPLISAIGHEID 239 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T+ D+ AD RAPTP+ AAE+AVP +E Q N+E ++ I + + N L Sbjct: 240 YTILDFVADQRAPTPSAAAELAVPDREEQQRIFENIEENIHKNIQKRLALCYNGLEQYNF 299 Query: 313 ALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + L RL ++ + ++ + + K F H S + + Sbjct: 300 LLEQSAPSKILQQYSSRLQQVQQAIQAQQKTRMNDKNMQFQHAAALAASLDPYRVLARGY 359 Query: 371 QHILEKQ------QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + + + ++ +R + + ++ + + E T+ Sbjct: 360 ALVTDTKGKVCTVEQLQPEQPICVRSRQYQARCRVETVEEINESTQK 406 Score = 63.6 bits (153), Expect = 9e-08, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 44/122 (36%), Gaps = 3/122 (2%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 ++ ++ +++I + +++ L + ++ +L + + + ++++ Sbjct: 266 EEQQRIFENIEENIHKNIQKRLALCYNGLEQYNFLLE--QSAPSKILQQYSSRLQQVQQA 323 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 I+ ++ + + S L RGY + DT T L + I Sbjct: 324 IQAQQKTRMNDKNMQFQHAAALAASLDPYRVLARGYALVTDTKGKVCT-VEQLQPEQPIC 382 Query: 487 IN 488 + Sbjct: 383 VR 384 >gi|330836749|ref|YP_004411390.1| Exodeoxyribonuclease 7 large subunit [Spirochaeta coccoides DSM 17374] gi|329748652|gb|AEC02008.1| Exodeoxyribonuclease 7 large subunit [Spirochaeta coccoides DSM 17374] Length = 404 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 118/357 (33%), Positives = 182/357 (50%), Gaps = 10/357 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ +K + + V GEIS +R SSGH YF+LKD + + A++++G + Sbjct: 12 LSVSELTSLIKKTLAGGFYDLNVEGEISNFR-PSSSGHWYFTLKDADAMLSAVMFRGKAS 70 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++F P +G +V G I + YQII S+ G G L LE+ K G F Sbjct: 71 MLDFFPRDGEMVVVTGAIDVYEKRGTYQIICSSMTRVGEGNLQARLEQLKNHYASLGYFD 130 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANA 193 K IP P+ +AV+TS +GA + DILQ + R L V+I P +VQGDE IA Sbjct: 131 PASKKSIPPDPQRVAVVTSESGAALHDILQVLGRRAAGLDVVILPTRVQGDEAAASIATR 190 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I Q + D+II+ARGGGS+EDL F+D ++ AI + ++P+ISA+GHE DW Sbjct: 191 IRQADRF------LLGDVIIVARGGGSLEDLMPFSDPSVIEAIHDCALPVISAVGHEIDW 244 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLL 311 L+DY AD+RAPTP+ AAE+ + L + + L ++I + + S Sbjct: 245 MLSDYVADIRAPTPSAAAELVSASRSERLEKLRAVRSTLVHLIQNRLSEARMLLSQASPR 304 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + +RY LD + ++ L + R ++++ +++ Sbjct: 305 TLSERLVSRIEQNRYLLDDMDMRMKETLLHRFEQARRTLASHTAQLQALSPQSILER 361 Score = 90.2 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 6/160 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHN---IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + + I++ + +R LEK + + + ++ E + ++ Sbjct: 240 HEIDWMLSDYVADIRAPTPSAAAELVSASRSERLEKLRAVRSTLVHLIQNRLSEARMLLS 299 Query: 401 ILHML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 E+ +RI + + R++ L H+ + +++ T LQ+ + ++ L Sbjct: 300 QASPRTLSERLVSRIEQNRYLLDDMDMRMKETLLHRFEQARRTLASHTAQLQALSPQSIL 359 Query: 459 KRGYTSIQDT-NNNFITQKRNLATKTRILINFFDGQANAI 497 +RGY I DT +T LA + I I+ DG A Sbjct: 360 ERGYAVITDTMTGQNMTSATQLAGEKDITIHLHDGSVAAT 399 >gi|73666662|ref|YP_302678.1| exodeoxyribonuclease VII large subunit [Ehrlichia canis str. Jake] gi|72393803|gb|AAZ68080.1| Exodeoxyribonuclease VII large subunit [Ehrlichia canis str. Jake] Length = 388 Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats. Identities = 156/342 (45%), Positives = 215/342 (62%), Gaps = 9/342 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 PE++VSEL+ ++ V +H+ VRGEIS SGH YF+LKD+ + ++A+ W Sbjct: 2 IPEFTVSELTKIFQNFVHETFTHIKVRGEISNL-SQPKSGHTYFTLKDDDAVLNAVCW-- 58 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 KIEF + G+E + G +TT+ SKYQ+I ES++ +G G L LE+RK KL +EG Sbjct: 59 NNTKIEFDLKNGLEVICFGFLTTY--QSKYQLITESMLLAGIGNLKIMLEQRKAKLEKEG 116 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF+ +K +P +PKII VITS TGAVI DIL R+ RFP ++I PV VQG+E +I Sbjct: 117 LFNQSNKKHLPLLPKIIGVITSTTGAVINDILNRVKSRFPSHIVISPVSVQGNEAINQII 176 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 NAI +LN RPD+II+ARGGGSIEDLW FNDE IVRA+A SSIPI+SAIGHET Sbjct: 177 NAISKLN----NSDINRPDVIIIARGGGSIEDLWIFNDEAIVRAVAGSSIPIVSAIGHET 232 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL DYAAD+RAPTPT A E+ +P K L + + ++ I+ I K + L L Sbjct: 233 DFTLIDYAADIRAPTPTAAVEIVLPTKTQLVELINSRFNKIKTILHYKINIKKDRLFYLH 292 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L + + + +L ++E L+I++ K + N + Sbjct: 293 NNLMKTKHKIKVLKLQLLEHKSQIEVLLKIMLLNKKQSLNEL 334 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 59/130 (45%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + ++E +K L Y KK+++ LH +TK++I L + + ++IE Sbjct: 259 KTQLVELINSRFNKIKTILHYKINIKKDRLFYLHNNLMKTKHKIKVLKLQLLEHKSQIEV 318 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L + + S++ + F + L+ GY I DTNNN I + L + I I Sbjct: 319 LLKIMLLNKKQSLNELYYKINQFNKEKILEAGYAVIYDTNNNHINSIKKLQSNDIISIEL 378 Query: 490 FDGQANAIVI 499 DG AI+ Sbjct: 379 KDGIVEAIIK 388 >gi|317498986|ref|ZP_07957268.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 5_1_63FAA] gi|316893735|gb|EFV15935.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 5_1_63FAA] Length = 406 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 121/373 (32%), Positives = 195/373 (52%), Gaps = 14/373 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +SV++++ ++K + +S+ L + ++G++S + HSSGH YFSLKD S+I + Sbjct: 1 MKSKVFSVTQINTYIKRMFQSDYALRRISIKGQVSNCK-YHSSGHIYFSLKDEESQISCV 59 Query: 68 IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ N ++F E+G E +V G ++ + YQ+ + + +G G L A E K+K Sbjct: 60 MFASARYNGLQFELEDGQEVIVDGNVSVYERGGSYQLYAQEIRLNGIGELYVAYEMLKQK 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EEGLF + K PIP PK I V+T+ TGA I DI+ R P ++++++P KVQG+ Sbjct: 120 LYEEGLFDHEIKKPIPKNPKKIGVVTARTGAAIHDIISTAKRRNPYVQLVLYPAKVQGEG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I + I L+ D II+ RGGGSIEDLW FN+E + RAI + PIIS Sbjct: 180 ASDTIVSGIRTLDQ-------YGVDTIIIGRGGGSIEDLWAFNEENVARAIYEAKTPIIS 232 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 GHE D T+ADYAADLRA TPT A E+AVP + + N E + ++ ++I+ Sbjct: 233 GTGHEVDTTIADYAADLRAATPTAACELAVPDITEVMEGIANREYTMAALLKQIIRRYQM 292 Query: 306 TLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + N L + RL L +++ ++ + + Sbjct: 293 KLQKYQITIANYDPRFQLQEQKMRLSELEEQIQQVMKNKMTGYKHKLELYAKELHGLSPT 352 Query: 364 HNIQKNRQHILEK 376 + ++ ++ Sbjct: 353 AKLINGFGYLEDQ 365 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 57/142 (40%), Gaps = 2/142 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + + I ++ + ++KQ +R ++ ++ + + + ++ + +L Sbjct: 265 ITEVMEGIANREYTMAALLKQIIRRYQMKLQKY--QITIANYDPRFQLQEQKMRLSELEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +I+ ++ +K+ + + + L + L G+ ++D N +T + +I Sbjct: 323 QIQQVMKNKMTGYKHKLELYAKELHGLSPTAKLINGFGYLEDQNGEPVTSVHKVKEGDQI 382 Query: 486 LINFFDGQANAIVINKAPPKEQ 507 + DG A+ E+ Sbjct: 383 SLTISDGTILAMAKQIRTMDEK 404 >gi|269123685|ref|YP_003306262.1| exodeoxyribonuclease VII, large subunit [Streptobacillus moniliformis DSM 12112] gi|268315011|gb|ACZ01385.1| exodeoxyribonuclease VII, large subunit [Streptobacillus moniliformis DSM 12112] Length = 442 Score = 272 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 130/490 (26%), Positives = 218/490 (44%), Gaps = 57/490 (11%) Query: 15 YSVSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VSE+ + ++ S + V + GEIS H +GH YF+LKD++S+I + Sbjct: 5 LTVSEIVNLVDRFIKTSEMKKVSIEGEISNIT-YHKTGHLYFTLKDSNSQIKCTAFGYLY 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEGL 132 I +EG + ++ I+ + + +E L G L LE+ KK+ LE+G Sbjct: 64 KNIPRDLKEGDKIKIVADISFYKPRCELTFNVEILEKMNKIGYLYEKLEELKKEYLEKGY 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F K IP I K + VIT+ TGA IRDI+ R + + ++PVKVQG +EI Sbjct: 124 FDSNKKKKIPMIVKRLGVITAETGAAIRDIVNTTHSRDKYVDIFLYPVKVQGIGAKEEIV 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI N + + D +I+ RGGGSIEDLW FN+ ++ AI +S I ++SA+GHET Sbjct: 184 EAIKYFN---DNKDKYNLDALIVGRGGGSIEDLWAFNEREVIEAIYSSDIFVVSAVGHET 240 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN--S 309 D L+DY ADLRA TPT AAE + + L + E + + I+ K L + Sbjct: 241 DTLLSDYVADLRASTPTQAAEKIIKRYDDTLYFLNSFEDKASKILENKYKSLKKELENLN 300 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + N ++ R + L + E + + I ++ + +++ + L Sbjct: 301 NSYIIRNIGDRINEKRILISELETKAEKAMNLKINKEKNNIEVFKSKLNINNLT------ 354 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 K+ L++L + ++I + Sbjct: 355 ---------------------------TKVNSLNILLQSQSDKISKI------------- 374 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + +KI+ + + + ++ LK+GYT N I + ++++ I F Sbjct: 375 -IENKIEKKKLELENIKLSVSKHSNEDILKKGYTITTYK-GNIIKRSIDISSGNTIKTTF 432 Query: 490 FDGQANAIVI 499 +DG + V Sbjct: 433 YDGYIESKVK 442 >gi|193212044|ref|YP_001997997.1| exodeoxyribonuclease VII large subunit [Chlorobaculum parvum NCIB 8327] gi|193085521|gb|ACF10797.1| exodeoxyribonuclease VII, large subunit [Chlorobaculum parvum NCIB 8327] Length = 402 Score = 272 bits (694), Expect = 2e-70, Method: Composition-based stats. Identities = 126/356 (35%), Positives = 199/356 (55%), Gaps = 6/356 (1%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SV EL+ +K +ES V V+GE+S + +HSSGH Y +LKD+ +++ A++WK + Sbjct: 7 SVGELTRTIKSELESLFPFVRVKGELSNCK-LHSSGHVYLTLKDSEAQLPAVMWKSVRTR 65 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 +G+E + G++ +P + +YQ+I +L +G G ALE+ KL + G F Sbjct: 66 FPMELRDGLEVIAEGRLEVYPPAGRYQLICTALFETGEGAQRLALERLIAKLAQAGYFDP 125 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K PIP IP+ I +ITS TGAVIRD+ + RFP ++++PV+VQG+ + I A+ Sbjct: 126 ERKKPIPRIPRRIGMITSSTGAVIRDMSDVFARRFPAAELLLYPVQVQGERAVESIVRAL 185 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N RPD++I+ARGGGS EDL FNDE + AI S IP+ISA+GHETD + Sbjct: 186 RYFND--PPIPEHRPDVLIVARGGGSAEDLQAFNDEAVAEAIYQSKIPVISAVGHETDLS 243 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD ADLRA TP+ AAE AVP ++ L + L R + ++ I L+S+ + Sbjct: 244 VADMVADLRAGTPSIAAERAVPDRDELLRHIDGLMQRQSILMEGKISGAQLQLDSITSSY 303 Query: 315 P--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 Q L RL +E++ + + + + +R++ + +++ Sbjct: 304 AFNRPAQMLGQVEERLALTEKEMKRAMAEKVRDREQQLRAATDRLEMLDIQRVLKR 359 Score = 91.0 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 6/155 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHI-----EQIVKQHLRYIFLEKKEKIAILHMLREQT 409 +++ ++ E +HI Q + + + + + Sbjct: 249 ADLRAGTPSIAAERAVPDRDELLRHIDGLMQRQSILMEGKISGAQLQLDSITSSYAFNRP 308 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + + + ++ ++ K++ + T L+ + LKRG+ + + Sbjct: 309 AQMLGQVEERLALTEKEMKRAMAEKVRDREQQLRAATDRLEMLDIQRVLKRGFALV-SQD 367 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 + ++T + L +I I F DG+ A V N+ P Sbjct: 368 DRYVTSAKALEEGAKIGITFHDGRREAKVTNQTFP 402 >gi|256752866|ref|ZP_05493704.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter ethanolicus CCSD1] gi|256748243|gb|EEU61309.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter ethanolicus CCSD1] Length = 401 Score = 272 bits (694), Expect = 2e-70, Method: Composition-based stats. Identities = 135/407 (33%), Positives = 222/407 (54%), Gaps = 13/407 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + V E++ ++K +++++ L +V V+GEIS + HS+G YF+LKD + + + Sbjct: 1 MQLKALEVREITDYIKKMMDNDIILRNVRVKGEISNLK-YHSTG-IYFTLKDEIASLKCV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + F ++G+ +V G+I+ + + YQ+ +S+ G G L A K K+KL Sbjct: 59 MFNEYGKLLNFTLQDGMSVIVTGRISVYERNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K PIP PK IAV+TSPTGAVIRDI+ R P + +++ PV VQG Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI NA LN K+ D+IILARGGGS+E++W FN+E + R I S IP++SA Sbjct: 179 ADEICNAFRILNKRKD------IDVIILARGGGSLEEIWPFNEEKVARCIYASCIPVVSA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T++D+ ADLRAPTP+ AAE+ VP + Q L L+ +L ++ + K Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L + + R++++ L L + + I K F + ++ S + Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + +L+KQ+ + V+ Y ++ K + ++ K Sbjct: 353 VLTRGYTIVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVKE 399 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 35/99 (35%) Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + + L ++ L + + + I L S + L RGYT Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + D I+ R++ I I F DG+A AIV Sbjct: 360 IVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVK 398 >gi|150400340|ref|YP_001324107.1| exodeoxyribonuclease VII large subunit [Methanococcus vannielii SB] gi|150013043|gb|ABR55495.1| exodeoxyribonuclease VII, large subunit [Methanococcus vannielii SB] Length = 410 Score = 272 bits (694), Expect = 2e-70, Method: Composition-based stats. Identities = 134/365 (36%), Positives = 206/365 (56%), Gaps = 12/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S SVSEL+ ++K+ +E++L ++GEIS +H SGH YF+LKD ID Sbjct: 8 SAFSNTLSVSELNLYVKNTLENDLILKRASIKGEISNC-ILHRSGHIYFTLKDEEGAIDC 66 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++KG + F+P++GI+ +V GK++ + + KYQ+ S+ G G L EK K+K Sbjct: 67 VMFKGDARLLNFIPKDGIKVIVTGKVSIYAKTGKYQVYCNSMEKEGIGELYIKFEKLKEK 126 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 L +EGLF + K IP K I +ITSPTGA + DI++ R + ++I+P VQG+ Sbjct: 127 LEKEGLFDELKKKKIPRYAKNIGIITSPTGAALTDIIKVTRLRNRSVNLLIYPASVQGEN 186 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P EI N I +LN D+IILARGGG+IEDLW FNDE + RAI S PI++ Sbjct: 187 APSEIINGISKLN------NHKDIDLIILARGGGAIEDLWCFNDESLARAIFKSEKPIVT 240 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D+T+AD+ +DLRA TP+ AAE++V + L S L NLE L+ I+ I K Sbjct: 241 GIGHEIDFTIADFVSDLRAATPSNAAEISVFNEFELISKLKNLEKNLSTKILTDISKKAY 300 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 ++ L + + + + L+R + H ++ + + F + + + + Sbjct: 301 EVDFLYSKFEKNSPNSKIEKQKAILERYNALITHEIKNKFAYELKRFEKAHSLLNAYNPL 360 Query: 364 HNIQK 368 + + K Sbjct: 361 NVLNK 365 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 38/94 (40%) Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465 + ++I +++ I + +K +L ++ N L +GYT I Sbjct: 311 KNSPNSKIEKQKAILERYNALITHEIKNKFAYELKRFEKAHSLLNAYNPLNVLNKGYTII 370 Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 Q+ + I+ K L +K + I F DG + + Sbjct: 371 QNPDGRIISSKELLKSKKELKIIFKDGIVDVNIT 404 >gi|291276687|ref|YP_003516459.1| exodeoxyribonuclease VII large subunit [Helicobacter mustelae 12198] gi|290963881|emb|CBG39717.1| exodeoxyribonuclease VII large subunit [Helicobacter mustelae 12198] Length = 418 Score = 272 bits (694), Expect = 2e-70, Method: Composition-based stats. Identities = 121/397 (30%), Positives = 202/397 (50%), Gaps = 9/397 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 SVS L+ ++ ++E+ VCV GEIS H+SGH YFS+KD S I ++++G Sbjct: 2 ANPLSVSALNAQIQALLETTFLQVCVEGEISNLT-KHNSGHFYFSIKDQDSVISCVLFRG 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 K+ F+ E + +V G I+ + YQI+ ++ P G G L A E+ +KK + G Sbjct: 61 NAQKLRFVLENAQKVIVQGSISVYVPRGNYQILCTNITPFGQGALHLAYEQLRKKYEKLG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 F K +P PK IA+ITS TGA ++D+L R+ ++++ F VQGDE +I Sbjct: 121 YFDAALKKKMPKFPKKIALITSNTGAALQDMLSVAKKRWNLVKLVNFDTLVQGDEAKFQI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ I ++ + D++I+ RGGGS+EDLW FN+E++++AI + PI+SA+GHE Sbjct: 181 ADRIAYVDGFF--GSSDAFDVMIIGRGGGSMEDLWAFNEEIVMQAIFEARTPIVSAVGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D L+D+ ADLRAPTP+ A EM +P K H L + ++ + + + + L+ Sbjct: 239 IDVVLSDFVADLRAPTPSAAMEMILPEKHHWLLVLDEMGEEISLKMQKYLAQMQDRLSDY 298 Query: 311 LKALPNSDQ--TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + + L L L+ I N + + + + Sbjct: 299 EYFLQQCNVGGRIHLAEEILQNLLVSLKQAARIFFD---CRANLLATEGQMAMAMEKFLQ 355 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 +++ L K + + + ++ R I + + L L Sbjct: 356 DKKLELLKWERLLRCEREKDRAIQISHDGRKVDLQNL 392 >gi|167037512|ref|YP_001665090.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115926|ref|YP_004186085.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|226697617|sp|B0K9E1|EX7L_THEP3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|166856346|gb|ABY94754.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929017|gb|ADV79702.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 401 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 135/407 (33%), Positives = 223/407 (54%), Gaps = 13/407 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + V E++ ++K +++++ L +V V+GEIS + HS+G YF+LKD + + + Sbjct: 1 MQLKALEVREITDYIKKMMDNDIILRNVRVKGEISNLK-YHSTG-IYFTLKDEIASLKCV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + F ++G+ +V G+I+ + + YQ+ +S+ G G L A K K+KL Sbjct: 59 MFNEYGKLLNFTLQDGMSVIVTGRISVYERNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K PIP PK IAV+TSPTGAVIRDI+ R P + +++ PV VQG Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI NA+ LN ++ D+IILARGGGS+E++W FN+E + R I S IP++SA Sbjct: 179 ADEICNALRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T++D+ ADLRAPTP+ AAE+ VP + Q L L+ +L ++ + K Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L + + R++++ L L + + I K F + ++ S + Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + +L+KQ+ + VK Y ++ K + ++ K Sbjct: 353 VLTRGYTIVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVKE 399 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 35/99 (35%) Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + + L ++ L + + + I L S + L RGYT Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + D I+ +++ I I F DG+A AIV Sbjct: 360 IVLDKQEKVISSVKDIKPYDEIKILFKDGKAKAIVQEVK 398 >gi|167766575|ref|ZP_02438628.1| hypothetical protein CLOSS21_01081 [Clostridium sp. SS2/1] gi|167711698|gb|EDS22277.1| hypothetical protein CLOSS21_01081 [Clostridium sp. SS2/1] gi|291558611|emb|CBL37411.1| exodeoxyribonuclease VII, large subunit [butyrate-producing bacterium SSC/2] Length = 406 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 119/373 (31%), Positives = 194/373 (52%), Gaps = 14/373 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +SV++++ ++K + +S+ L + ++G++S + HSSGH YFSLKD S+I + Sbjct: 1 MKSKVFSVTQINTYIKRMFQSDYALRRISIKGQVSNCK-YHSSGHIYFSLKDEESQISCV 59 Query: 68 IWKG-TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ N ++F E+G E +V G ++ + YQ+ + + +G G L A E K+K Sbjct: 60 MFASARYNGLQFELEDGQEVIVDGNVSVYERGGSYQLYAQEIRLNGIGELYVAYEMLKQK 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EEGLF + K PIP PK I V+T+ TGA I DI+ R P ++++++P KVQG+ Sbjct: 120 LYEEGLFDHEIKKPIPKNPKKIGVVTARTGAAIHDIISTAKRRNPYVQLVLYPAKVQGEG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I + I L+ D II+ RGGGSIEDLW FN+E + RAI + PIIS Sbjct: 180 ASDTIVSGIRTLDQ-------YGVDTIIIGRGGGSIEDLWAFNEENVARAIYEAKTPIIS 232 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 GHE D T+ADYAADLRA TPT A E+AVP + + N E + ++ ++I+ Sbjct: 233 GTGHEVDTTIADYAADLRAATPTAACELAVPDITEVMEGIANREYTMAALLKQIIRRYQM 292 Query: 306 TLNSLLKALPNSDQTLSCSRYRLD--RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + N D ++ L +++ ++ + + Sbjct: 293 KLQKYQITIANYDPRFQLQEQKMHLSELEEQIQQVMKNKMTGYKHKLELYAKELHGLSPT 352 Query: 364 HNIQKNRQHILEK 376 + ++ ++ Sbjct: 353 AKLINGFGYLEDQ 365 Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 58/142 (40%), Gaps = 2/142 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + + I ++ + ++KQ +R ++ ++ + + + ++ H+ +L Sbjct: 265 ITEVMEGIANREYTMAALLKQIIRRYQMKLQKY--QITIANYDPRFQLQEQKMHLSELEE 322 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +I+ ++ +K+ + + + L + L G+ ++D N +T + +I Sbjct: 323 QIQQVMKNKMTGYKHKLELYAKELHGLSPTAKLINGFGYLEDQNGEPVTSVHKVKEGDQI 382 Query: 486 LINFFDGQANAIVINKAPPKEQ 507 + DG A+ E+ Sbjct: 383 SLTISDGTILAMAKQIRTMDEK 404 >gi|167040174|ref|YP_001663159.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter sp. X514] gi|300914257|ref|ZP_07131573.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp. X561] gi|307724507|ref|YP_003904258.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter sp. X513] gi|226697618|sp|B0K0U8|EX7L_THEPX RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|166854414|gb|ABY92823.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp. X514] gi|300889192|gb|EFK84338.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp. X561] gi|307581568|gb|ADN54967.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter sp. X513] Length = 401 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 134/407 (32%), Positives = 222/407 (54%), Gaps = 13/407 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + V E++ ++K +++++ L +V V+GEIS + HS+G YF+LKD + + + Sbjct: 1 MQLKALEVREITDYIKKMMDNDIILRNVRVKGEISNLK-YHSTG-IYFTLKDEIASLKCV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + F ++G+ +V G+I+ + + YQ+ +S+ G G L A K K+KL Sbjct: 59 MFNEYGKLLNFTLQDGMSVIVTGRISVYERNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K PIP PK IAV+TSPTGAVIRDI+ R P + +++ PV VQG Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISRRRNPTVDILVVPVLVQGSSA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI NA LN ++ D+IILARGGGS+E++W FN+E + R I S IP++SA Sbjct: 179 ADEICNAFRILNKRED------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T++D+ ADLRAPTP+ AAE+ VP + Q L L+ +L ++ + K Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQRELFLLKTKLLTLMTAELNRKKKE 292 Query: 307 LNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + L + + R++++ L L + + I K F + ++ S + Sbjct: 293 FEGLKRALYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLK 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + +L+KQ+ + V+ Y ++ K + ++ K Sbjct: 353 VLTRGYTIVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVKE 399 Score = 96.7 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 35/99 (35%) Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + + L ++ L + + + I L S + L RGYT Sbjct: 300 LYLNSPTKKSEILRHKVENLTASLYNEMLSIYQHKRNDFLILAEKLNSLSPLKVLTRGYT 359 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + D I+ R++ I I F DG+A AIV Sbjct: 360 IVLDKQEKVISSVRDIKPYDEIKILFKDGKAKAIVQEVK 398 >gi|315652075|ref|ZP_07905076.1| exodeoxyribonuclease VII large subunit [Eubacterium saburreum DSM 3986] gi|315485722|gb|EFU76103.1| exodeoxyribonuclease VII large subunit [Eubacterium saburreum DSM 3986] Length = 392 Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats. Identities = 114/358 (31%), Positives = 188/358 (52%), Gaps = 13/358 (3%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSVS+++ ++K++ + + + V GE+S S H YF++KD + A+++ Sbjct: 2 VYSVSKVNAYIKNMFMQDFVLNKISVEGEVSNCT-YAGSNHIYFTIKDEGGTLSAVMFAS 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + F + G +V G I+ + +YQ+ + +G G L K+KL + G Sbjct: 61 QRGGLSFDMKRGQRVIVTGSISCYEKEGRYQLYAVKIEEAGKGELYEKYLILKEKLEDMG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F +K IP + I V T+ TGAVI DI R P +R+++ P VQG+ K I Sbjct: 121 MFDQSYKREIPRFVQSIGVATAQTGAVINDIKNVSYRRNPYVRIVLAPCLVQGESASKSI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI +L+ + D+II+ RGGGSIEDL+ FNDE + I N+ PIISA+GHE Sbjct: 181 IAAIKKLDKI-------NLDVIIVGRGGGSIEDLYCFNDEKLAETIFNTKTPIISAVGHE 233 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+T+AD+ ADLRAPTP+ AAE+A V + +L + +L R + Y L+ L Sbjct: 234 TDFTIADFVADLRAPTPSAAAEIANFVYDDYMYTLDFYKKKLGECAGRKVDYTKRDLDML 293 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L L + L + RL+ + ++++ + I+ K ++ R+++ + + Sbjct: 294 LIRLNTLSPQIKLREQKQRLENFSKTIQNSFKNIMENKKTALTNLSKRLETVSPLKRL 351 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 2/111 (1%) Query: 390 YIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 K + +L + + ++ ++ I+ + +++ T+++ ++ Sbjct: 281 RKVDYTKRDLDMLLIRLNTLSPQIKLREQKQRLENFSKTIQNSFKNIMENKKTALTNLSK 340 Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 L++ + L GY I D +N + L + I I F DG+ A V Sbjct: 341 RLETVSPLKRLSGGYAYISDKDNKKVLSAAVLHKEDEINIFFSDGKIRAKV 391 >gi|327389447|gb|EGE87792.1| exodeoxyribonuclease VII, large subunit [Streptococcus pneumoniae GA04375] Length = 412 Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats. Identities = 136/461 (29%), Positives = 214/461 (46%), Gaps = 55/461 (11%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGNYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD TLAD+ AD RA TPT AAE+A PV + + + + + Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQEKR---------------- 277 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + ++ +K + Sbjct: 278 --------------------------MVTAVRNVLSKKQEALKKCSQSVIFRQPERLYDG 311 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 Q + + Q ++Q ++ + + + L L +I + +L + Sbjct: 312 YLQRLDQLQLRLKQSLRTRISDNKQLVQARTHQLVQL--SPVTKIQRYQDRLGQLDKLLG 369 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 ++ + + L + RGY ++ + Sbjct: 370 SQMALVYDAKVAEAKRLSEALLMLDTSRIVARGYAIVKKKS 410 >gi|281356995|ref|ZP_06243485.1| exodeoxyribonuclease VII, large subunit [Victivallis vadensis ATCC BAA-548] gi|281316553|gb|EFB00577.1| exodeoxyribonuclease VII, large subunit [Victivallis vadensis ATCC BAA-548] Length = 418 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 115/368 (31%), Positives = 186/368 (50%), Gaps = 10/368 (2%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +SVS+++ ++ IVE +L +RGE+ IH SGH YF++KD S++ + + Sbjct: 26 TEQIWSVSDVNRAVREIVEGSLLPFWLRGEVGSLV-IHRSGHVYFTIKDTRSQMRGVFFG 84 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 G + G G +T + +YQ L +G G L E K KL E Sbjct: 85 GAAACTKLGVANGTLIEAFGNLTVYEVRGEYQFSARQLRLAGIGDLQQRFEAVKNKLAAE 144 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF K PIP +P+ I V+TSP+GA IRD LQ I+ RFP + V I+P VQG ++ Sbjct: 145 GLFDPGRKRPIPVLPRRIGVVTSPSGAAIRDFLQIINRRFPNVNVRIYPCAVQGAGAAEQ 204 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A + + D++++ RGGGS+EDLW FN+E++ RA+A S+P+ISA+GH Sbjct: 205 VARGVDFFSR------TRGADVVVVTRGGGSMEDLWPFNEEVVARAVAACSVPVISAVGH 258 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D+T+ D+AADLR PTP+ AAE+ + ++ + L E L+N + + + L+ Sbjct: 259 EIDFTICDFAADLRVPTPSAAAELVIGRRQEMSDRLNRFEKDLHNTLNLALTRLKSRLDR 318 Query: 310 L--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 R +LD L L+ + E + + + + + ++ Sbjct: 319 AAGSFVFKEPAHLARMRRQQLDELENRLQGSAERWLLANRARLDQLAGTLTTLNPSRQLE 378 Query: 368 KNRQHILE 375 + + + Sbjct: 379 RGYAILFD 386 Score = 91.0 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 4/133 (3%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITR 426 RQ + ++ E+ + L K ++ + ++ + + +L R Sbjct: 286 RRQEMSDRLNRFEKDLHNTLNLALTRLKSRLDRAAGSFVFKEPAHLARMRRQQLDELENR 345 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRI 485 ++ + + + L + L+RGY + D +T + +A TR+ Sbjct: 346 LQGSAERWLLANRARLDQLAGTLTTLNPSRQLERGYAILFDPAAGKPVTTSK-VAAGTRL 404 Query: 486 LINFFDGQANAIV 498 DG+ V Sbjct: 405 QARLADGEMTVEV 417 >gi|255321888|ref|ZP_05363038.1| exodeoxyribonuclease VII, large subunit [Campylobacter showae RM3277] gi|255300992|gb|EET80259.1| exodeoxyribonuclease VII, large subunit [Campylobacter showae RM3277] Length = 387 Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats. Identities = 119/344 (34%), Positives = 180/344 (52%), Gaps = 11/344 (3%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ K ++E+ S+V V GEIS H SGH YF+LKD + I A+I+K Sbjct: 2 LSVSELNEQAKTLLETTFSYVEVEGEISRLV-RHGSGHWYFTLKDEKAAISAVIYKFNAA 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++F +GI+ + GKI+ + S YQ I + PSG G L A ++ K +L EGLF Sbjct: 61 KLKFDVADGIKVALYGKISLYSPSGSYQFIATLIRPSGEGELELAFKQLKSRLESEGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 K P+P P+ IA++TS T A ++D+L+ S R+ L +I+F QG+ P + A Sbjct: 121 ISRKKPLPKFPRRIALVTSKTSAALQDMLRIASQRWALAEIIVFDSLTQGETAPASLIRA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + I+LARGGGS EDLW FNDE + R I + P+ISA+GHE D+ Sbjct: 181 LKRAGAS-------GANAIVLARGGGSREDLWCFNDENLAREIYAARTPVISAVGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+AAD RAPTP+ A +P L S+ L + R+ + K N L + Sbjct: 234 VISDFAADFRAPTPSAAMAALLPDAGELMQSIDRLSEAADAAFTRVWERKFNALAMMRAR 293 Query: 314 LPNSD--QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + Q ++ L L + L+ ++ + + Sbjct: 294 FSQASLTQKIARKEQILLNLRQALDAAVQTKLLKFENALKLARA 337 >gi|253578526|ref|ZP_04855798.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850844|gb|EES78802.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 393 Score = 270 bits (691), Expect = 4e-70, Method: Composition-based stats. Identities = 109/348 (31%), Positives = 181/348 (52%), Gaps = 11/348 (3%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 L + V+GE+S + H+SGH YFSLKD ++ +++ G + F + G + +V G Sbjct: 8 LQKIYVKGEVSNCK-YHTSGHIYFSLKDETGTLNCVMFAGHRRGLAFAMKNGDKVIVGGS 66 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 + + +YQ+ + + G+G L K++L + G+F+ ++K PIP + + V+ Sbjct: 67 VDVYERDGRYQMYAKEITLEGAGILYERYLALKQELEDMGMFAQEYKQPIPRFIRRLGVV 126 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 T+PTGA ++DI R P L++I++P VQG + I I L+ D Sbjct: 127 TAPTGAAVQDIRNISYRRNPYLQIILYPALVQGAGAAESIVKGIQMLDK-------TDVD 179 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 +II+ RGGGSIEDLW FN+E++ RAI S PIISA+GHETD+T+AD+AADLRAPTP+ A Sbjct: 180 VIIVGRGGGSIEDLWAFNEEIVARAIFECSTPIISAVGHETDFTIADFAADLRAPTPSAA 239 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRL 328 AE+AV + ++ RL + + L + + L R RL Sbjct: 240 AELAVDDYRSVIEAVSIYRQRLYRAMSGKTDLYRSRLEHFQTKFAYLSPENRLREQRQRL 299 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 L +++ + + + + + R + + + ++ +K Sbjct: 300 ADLENAVQNGMNRKLQDERHRLSVYLERFAGLSPLKKLNQGYSYVADK 347 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 18/131 (13%), Positives = 42/131 (32%), Gaps = 2/131 (1%) Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q + + + + L +NR+ + L ++ ++ K+ Sbjct: 257 YRQRLYRAMSGKTDLYRSRLEHFQTKFAYL--SPENRLREQRQRLADLENAVQNGMNRKL 314 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + +S+ + L +GY+ + D +T + I I+ DG Sbjct: 315 QDERHRLSVYLERFAGLSPLKKLNQGYSYVADKYKKTLTSVEQVQNGDTIYISVTDGTIE 374 Query: 496 AIVINKAPPKE 506 A V + Sbjct: 375 ADVTGTVKEER 385 >gi|291459866|ref|ZP_06599256.1| exodeoxyribonuclease VII, large subunit [Oribacterium sp. oral taxon 078 str. F0262] gi|291417656|gb|EFE91375.1| exodeoxyribonuclease VII, large subunit [Oribacterium sp. oral taxon 078 str. F0262] Length = 445 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 121/378 (32%), Positives = 196/378 (51%), Gaps = 15/378 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSVSELS +L + + L ++ V GEIS + HSSG+ +F+LKD+ S++ A+++ G Sbjct: 6 YSVSELSRYLSGLFSEDYLLRNLTVSGEISNLK-YHSSGNIFFTLKDSASQLSAVLFAGD 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F E+G++ L G+++ + YQ+ ++S+ G G L E+ K+KL E G Sbjct: 65 RAGLRFRLEDGMKVLCGGRVSVYEKGGSYQLYVKSVRSDGLGELYLLYEELKRKLAEMGF 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F +K +P + I ++T+ TGA +RDI+Q R P + ++P KVQG+ + ++ Sbjct: 125 FDPAYKRALPRYARRIGIVTAKTGAAVRDIIQIARRRNPYAELWLYPAKVQGEGAAESVS 184 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I L+ L D++I+ RGGGSIEDLW FN+E + AI ++ PIISA+GHET Sbjct: 185 EGIETLDRL-------GLDVLIVGRGGGSIEDLWAFNEERVAEAIFHADTPIISAVGHET 237 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T+ADY AD RAPTP+ AAE+AV L E+ +++ + + + Sbjct: 238 DTTIADYVADRRAPTPSAAAELAVFELSSFYEDLKQRESTFLSLMREKLLKERQSAERRE 297 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + + L R RL EL ++ I R+ S ++ + Sbjct: 298 YRLRALSPETKLLRLRQRLMGAEEELRKQMKERIRRERTRLQAYRG--LSVWMEKRLSGE 355 Query: 370 RQHILEKQQHIEQIVKQH 387 RQ + + ++ Sbjct: 356 RQRLELLTERLDAASPGR 373 >gi|319957425|ref|YP_004168688.1| exodeoxyribonuclease vii, large subunit [Nitratifractor salsuginis DSM 16511] gi|319419829|gb|ADV46939.1| exodeoxyribonuclease VII, large subunit [Nitratifractor salsuginis DSM 16511] Length = 421 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 120/422 (28%), Positives = 209/422 (49%), Gaps = 16/422 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VS L+ +K ++E+ H+ + GEI+ HSSGH YFS+KD+ S + ++W+ + Sbjct: 5 TVSALNEKIKSLLEATFMHIRLEGEIASVT-YHSSGHIYFSVKDDRSTLRCVMWRSNAAR 63 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++F E+G ++ G + + +YQ+I S+ P G G L A E+ KK+L +G F+ Sbjct: 64 LKFRLEKGAHVVIDGSVGVYTPRGEYQMIAVSVEPYGRGALAVAFEQLKKRLEAQGYFAA 123 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ IA++T+ GA ++D+L+ R+PL +I+ VQG+ + IA AI Sbjct: 124 ERKKPLPRYPRRIALVTAVGGAALQDMLKIARRRWPLTELIVVDTLVQGEGAAESIARAI 183 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 +TL DII+ RGGGS EDLW FN+E + AI + P++SA+GHE D Sbjct: 184 AYADTL-------GADIIVTGRGGGSAEDLWAFNEEAVAEAIFQAQTPVVSAVGHEVDTL 236 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D+ ADLRAPTP+ A EM +P + L +L RL + L++ L +AL Sbjct: 237 ISDFVADLRAPTPSAAMEMILPDQNELLRTLDERADRLRRRMRELLRSSEERLRREEEAL 296 Query: 315 PNSD--QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + L + RL R+ + + + + R + + + + Sbjct: 297 KRASILSRLQSALEEFARLRRDYREVIRYRLSQFEGELLPLQRR-CDETIRRQLARQEGR 355 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++ + ++ R + L R ++ + + +R+ + Sbjct: 356 VKILEEQL-RLQNPRQRTREGWAE---VSLDGRRVPLEHLDPEMEFQLTDAQSRLRARVL 411 Query: 433 HK 434 HK Sbjct: 412 HK 413 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 52/179 (29%), Gaps = 2/179 (1%) Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 D +E+I+ + + R +++ L Sbjct: 243 DLRAPTPSAAMEMILPDQNELLRTLDERADRLRRRMRELLRSSEERLRREEEALKRASIL 302 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + +E + RE + R+ + L R + + ++ V I Sbjct: 303 SRLQSALEEFARLRRDYREVIRYRLSQFEGELLPLQRRCDETIRRQLARQEGRVKILEEQ 362 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 L+ + + G+ + + + +L + + + A V++K P + Sbjct: 363 LRLQNPRQRTREGWAEVSL-DGRRVP-LEHLDPEMEFQLTDAQSRLRARVLHKEPLDTK 419 >gi|269926767|ref|YP_003323390.1| exodeoxyribonuclease VII, large subunit [Thermobaculum terrenum ATCC BAA-798] gi|269790427|gb|ACZ42568.1| exodeoxyribonuclease VII, large subunit [Thermobaculum terrenum ATCC BAA-798] Length = 402 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 120/359 (33%), Positives = 194/359 (54%), Gaps = 12/359 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VS+++++L+ ++E++ LS V ++GEIS S GH YF+LKD S++ +++K Sbjct: 4 LTVSDINFYLQQLLETDRLLSDVWIQGEISNL-SQSSKGHFYFTLKDGESQLSCVLFKQD 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 L ++ G + G+++ + S K Q ++ + P G+G L + K KL EGL Sbjct: 63 LIHVQAELANGQAVIAHGRVSIWKQSGKLQFYVDIVQPEGTGRLELEFQALKAKLEAEGL 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F + K IP P I ++TS GAV+ DIL + R+PL VI+ +VQGD +IA Sbjct: 123 FDESRKRSIPKFPSAIGIVTSKHGAVLHDILNILRRRYPLAEVILSHTQVQGDGASLQIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI +L+ + D+IILARGGGS E+LW FN+E + RAI +P+ISAIGHET Sbjct: 183 AAIEKLHK------TAKVDVIILARGGGSREELWAFNEECVARAIYACPVPVISAIGHET 236 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ADY ADLRAPTP+ AAE+ VP L+ SL ++ + + + ++ + + + Sbjct: 237 DYTIADYVADLRAPTPSAAAELVVPNVAELRQSLDHMLNIASMNMRQKLRQCMEDVQHMH 296 Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + R +L L + +I K + + + + + + Sbjct: 297 SHLKRTSPIHAIHRHREKLSLLNDNALSRVRHLIELKKSNLETMALSLNALNPKAVLGR 355 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 2/137 (1%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 N+ + RQ + ++Q LR + + + L R + I + L Sbjct: 262 NVAELRQSLDHMLNIASMNMRQKLRQCMEDVQHMHSHLK--RTSPIHAIHRHREKLSLLN 319 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + H I+ +++ L + K L RGY+ + + ++ Sbjct: 320 DNALSRVRHLIELKKSNLETMALSLNALNPKAVLGRGYSVTTTEDGKVLRSIDDVGNTKA 379 Query: 485 ILINFFDGQANAIVINK 501 I DG ++V Sbjct: 380 ITTRLADGFIKSMVDQT 396 >gi|21674642|ref|NP_662707.1| exodeoxyribonuclease VII large subunit [Chlorobium tepidum TLS] gi|31563172|sp|Q8KBF9|EX7L_CHLTE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|21647845|gb|AAM73049.1| exodeoxyribonuclease, large subunit [Chlorobium tepidum TLS] Length = 398 Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats. Identities = 130/356 (36%), Positives = 204/356 (57%), Gaps = 6/356 (1%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SV EL+ +K+ +ES V V+GE+S + HSSGH Y +LKD+ ++I A+IWK + Sbjct: 7 SVGELTRAIKNELESLFPFVRVKGELSNVK-QHSSGHVYLTLKDSEAQIPAVIWKSVRAR 65 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 +G+E + G++ +P + +YQ+I +L +G G ALE+ KL + G F Sbjct: 66 SPLELRDGLEVIAEGRLEVWPPAGRYQLICTALFETGEGEQRLALERLIAKLAKAGWFDA 125 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K PIP IP+ I +ITSPTGAVIRD+ + RFP ++++PV+VQG+ + I A+ Sbjct: 126 ERKKPIPRIPRRIGMITSPTGAVIRDMSDVFARRFPAAELLLYPVQVQGERAVESIVRAL 185 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N + +PD++I+ARGGGS EDL FNDE + AI S+IP+ISA+GHETD + Sbjct: 186 RYFND--PPKPEHKPDVLIVARGGGSSEDLQAFNDEAVAEAIYRSAIPVISAVGHETDLS 243 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD ADLRA TP+ AAE AVP +E L + NL R + ++ LI ++S+ + Sbjct: 244 VADMVADLRAGTPSIAAERAVPDREELLRLIDNLVNRQSILMEGLISGAQLQVDSITSSY 303 Query: 315 P--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 Q L RL + +E++ + + + + +R+ + +++ Sbjct: 304 AFNRPVQMLGQFEERLALMEKEMKRAIAEKVRDREQQLTAAADRLAMLDINRTLKR 359 Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 51/138 (36%), Gaps = 3/138 (2%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH--MLREQTKNRIFYLHTHIKK 422 +R+ +L ++ + + + ++ + + + + Sbjct: 262 RAVPDREELLRLIDNLVNRQSILMEGLISGAQLQVDSITSSYAFNRPVQMLGQFEERLAL 321 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + ++ ++ K++ ++ L TLKRG+ + ++ ++T ++L Sbjct: 322 MEKEMKRAIAEKVRDREQQLTAAADRLAMLDINRTLKRGFALVT-QDDRYVTSAKSLEAD 380 Query: 483 TRILINFFDGQANAIVIN 500 +I + F DGQ A V Sbjct: 381 AKIGLTFHDGQREARVTE 398 >gi|289578290|ref|YP_003476917.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacter italicus Ab9] gi|297544570|ref|YP_003676872.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528003|gb|ADD02355.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter italicus Ab9] gi|296842345|gb|ADH60861.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 406 Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats. Identities = 143/408 (35%), Positives = 230/408 (56%), Gaps = 13/408 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + V E++ ++K +++++ L +V VRGEIS + HS+G YF+LKD + + + Sbjct: 1 MQLKALEVREITDYIKKMMDNDIILRNVRVRGEISNLK-YHSTG-IYFTLKDEIASLKCV 58 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ + F ++G+ +V G+IT + + YQ+ +S+ G G L A K K+KL Sbjct: 59 MFNEYGKLLNFTLQDGMSVIVTGRITVYEKNGTYQLYAQSIQSDGIGALYFAFNKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLF K PIP PK IAV+TSPTGAVIRDI+ R P + +++ PV VQG Sbjct: 119 QKEGLFDSDKKKPIPKHPKKIAVVTSPTGAVIRDIITISKRRNPTIDILVVPVLVQGISA 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI NA+ LN K+ D+IILARGGGS+E++W FN+E + R I S IP++SA Sbjct: 179 ADEICNALRILNKRKD------IDVIILARGGGSLEEIWPFNEEKVARCIYASRIPVVSA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T++D+ ADLRAPTP+ AAE+ VP + Q + L+ RL +++ +K K Sbjct: 233 VGHETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQREIFLLKTRLITLMMAELKRKKKE 292 Query: 307 LNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L SL +AL + + +++++ L L + I RK F + ++ S ++ Sbjct: 293 LESLRRALYFNSPIKRNEVLKHKIESLKSSLCKEMLSIYNRKKNDFLILTEKLNSLSPLN 352 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + + IL+KQ+ + VK + Y ++ K + ++ K Sbjct: 353 VLTRGYTVILDKQEKVISSVKDIIPYEEVKILFKDGNAKAIIQEVKED 400 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 5/168 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + +++ + I Q+ I + + + + E K K L Sbjct: 235 HETDFTISDFVADLRAPTPSAAAEIVVPDIKVYQREIFLLKTRLITLMMAELKRKKKELE 294 Query: 404 MLRE-----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 LR R L I+ L + + + I T L S + N L Sbjct: 295 SLRRALYFNSPIKRNEVLKHKIESLKSSLCKEMLSIYNRKKNDFLILTEKLNSLSPLNVL 354 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 RGYT I D I+ +++ + I F DG A AI+ Sbjct: 355 TRGYTVILDKQEKVISSVKDIIPYEEVKILFKDGNAKAIIQEVKEDAR 402 >gi|332531105|ref|ZP_08407021.1| exodeoxyribonuclease VII, large subunit [Hylemonella gracilis ATCC 19624] gi|332039451|gb|EGI75861.1| exodeoxyribonuclease VII, large subunit [Hylemonella gracilis ATCC 19624] Length = 444 Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats. Identities = 127/388 (32%), Positives = 202/388 (52%), Gaps = 11/388 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59 M+ S + V L + +++ + V VRGEISGY + +SGHAYF+LKD Sbjct: 1 MSESVFAASTPR-IWQVGALCRAVADTLDARFNPVAVRGEISGYN-LAASGHAYFTLKDP 58 Query: 60 ---NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 + ++ +++ + ++F P EG + V G+++ + Q+I+ES+ +G+GTL Sbjct: 59 NGRDGGQLRCAMFRRAASLLDFAPREGDQVEVRGRLSVYEARGDLQLIVESMARAGAGTL 118 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 + K KL EGLF K +P +P+ I V+TS A +RD+ ++ R P + V Sbjct: 119 FEQFLRLKAKLEAEGLFDPGRKRALPRLPRGIGVVTSLGAAALRDVATALNRRAPHVPVC 178 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 I P VQG P E+ A+ +L L D+I+L RGGGSIEDLW FNDE +VR Sbjct: 179 IAPAAVQGGAAPGELVAALQRLYALAARGE---IDVILLVRGGGSIEDLWAFNDEQLVRT 235 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +A S +P+IS +GHETD+TLAD+ ADLRAPTPT AAE+A + + +L L+ +L + Sbjct: 236 MARSPVPVISGVGHETDFTLADFVADLRAPTPTAAAELAAEPQANWLGALALLQKQLRDA 295 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L+ L L L+ R R++ L L+H ++ + + Sbjct: 296 VQDRLDVASQRLDLALGRLGRPSARLARQRLRVNGLGLSLQHAAARLLLLLRQTLQRRAD 355 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQI 383 ++Q RQ + ++ + Sbjct: 356 AWPQMV-RRDMQLRRQRLEHAALRLQLL 382 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 18/151 (11%), Positives = 49/151 (32%), Gaps = 5/151 (3%) Query: 353 IINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 N + + L+ ++ + + Q ++ + + R ++++ + + Sbjct: 278 QANWLGALALLQKQLRDAVQDRLDVASQRLDLALGRLGRPSARLARQRLRVNGLGLSLQH 337 Query: 411 NRIFYLHTHIKKLITRIE---FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 L + L R + ++ ++ + LQ L+RGY + D Sbjct: 338 AAARLLLLLRQTLQRRADAWPQMVRRDMQLRRQRLEHAALRLQLLDPSLVLQRGYAWLTD 397 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIV 498 + +T+ + DG +V Sbjct: 398 ADGRAVTRAAQTHAGQSLHATLADGVVPVLV 428 >gi|148642061|ref|YP_001272574.1| exoribonuclease VII, large subunit, XseA [Methanobrevibacter smithii ATCC 35061] gi|148551078|gb|ABQ86206.1| exoribonuclease VII, large subunit, XseA [Methanobrevibacter smithii ATCC 35061] Length = 527 Score = 270 bits (689), Expect = 6e-70, Method: Composition-based stats. Identities = 133/515 (25%), Positives = 225/515 (43%), Gaps = 59/515 (11%) Query: 11 DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++ YS+S ++ + + + + +RGEI+ + G ++SGH YFSLKD +S I ++ Sbjct: 3 ENDIYSISAINNLIDKKISYCDDFKKIKIRGEITNFNGSYNSGHYYFSLKDKNSSISCVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +K + ++F P+ G++ + G+++ + Q + + +G G L A EK KKKL Sbjct: 63 FKLSTKSLDFEPKNGVDVVASGEVSFYKVRGNLQFRVRKMQEAGLGDLYIAFEKLKKKLD 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF D+ IP PK I VITS +G ++DI+ I R+P +I++ VQG + Sbjct: 123 KEGLFKDKKV--IPQYPKKIGVITSASGKAVKDIVNNIEKRWPAEIIVWNTTVQGANSTR 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I N D+II+ RGGGS +DLW FN E IVR+IANS P+I+AIG Sbjct: 181 SITKNIALANK-------TDVDVIIVGRGGGSTQDLWDFNKEEIVRSIANSKKPVITAIG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306 H TD TL+D +D A TPT AAE+ VP K L L N+E RLN++I + Sbjct: 234 HSTDKTLSDMVSDKVAATPTKAAELVVPNKVELNEKLKNIETRLNDLINSKLDNLTHKLN 293 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 ++ K L + + L L E +L +I ++ N + + + Sbjct: 294 ISKNNKTLKDPLSKYKNHQTNLVLLKTTAEKSLNQLIQSNELQLDNFNNSYILNNPDYIL 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL------------------------ 402 K I + ++ + L + L Sbjct: 354 NKKVGKITLFKNELDNNMSNCLLEYENKLNLHFKNLKSMNFIESFELKKNSLNLIENNLN 413 Query: 403 -------------------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + + + + ++ ++ ++ + S + Sbjct: 414 NSINVTLNSHIHDLEIIKNNHVFSNPCQVLDDKFVKMAQIHKSLDAEITKTLDSNENKLR 473 Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 I L+ L++GY ++D + I + + Sbjct: 474 ILEEKLKILNPDELLEKGY-VVKDPDE--IRKSKA 505 >gi|312134818|ref|YP_004002156.1| exodeoxyribonuclease vii, large subunit [Caldicellulosiruptor owensensis OL] gi|311774869|gb|ADQ04356.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor owensensis OL] Length = 454 Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats. Identities = 136/499 (27%), Positives = 214/499 (42%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N + E+SV EL+ +LK VE + L ++ +RGE+ R S H YF LKD + Sbjct: 4 NNIVPKKEWSVYELTSYLKKKVEMDVLLKNIYLRGEV--IRPSISGDHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 +I + + + + G + LV G + + ++ + + G G L L++ Sbjct: 62 KIKCVFFWFDKS---LEIKHGTKVLVKGNVIFYEKEGVIELKVNEITDIGLGELFIKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 +++L +EGLF ++K IP PK I ++TS GA IRDIL I RF ++V I+ V Sbjct: 119 LEERLRQEGLFDSKYKKEIPRYPKKIGIVTSKNGAAIRDILNTIYTRFENIQVYIYSCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I NT + ++II+ RGGGS EDL FN EM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNTSEP------VEVIIVGRGGGSFEDLMAFNSEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D+ L+D+ AD+RA TPT A E+ V ++ L + RL N I +L+ Sbjct: 233 PVISAVGHERDYVLSDFVADMRAITPTNAGEIVVNFQKQALEKLSEFQKRLKNAIEKLLN 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 N + L L T++ +D +L + + +R+ R+ Sbjct: 293 LSNNKIEILRYKLYQNSPANTIAKCIQDVDLCRHKLSFAVNKKLHEIHRNLKSFEKRLAD 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + R + + +E+ K+ L+ K + L Sbjct: 353 RNPELRLSVIRTNFDNCSRRLEEAFKKVLQQKEFVYKVNLEKLI---------------- 396 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 + N LKRGY+ N+ +T + Sbjct: 397 -------------------------------ALNPLNVLKRGYSITLH-NSRILTTISQI 424 Query: 480 ATKTRILINFFDGQANAIV 498 + I+ DG + V Sbjct: 425 SNGDEIITRLSDGIIKSRV 443 >gi|251773176|gb|EES53729.1| exodeoxyribonuclease VII, large subunit [Leptospirillum ferrodiazotrophum] Length = 503 Score = 268 bits (686), Expect = 1e-69, Method: Composition-based stats. Identities = 113/501 (22%), Positives = 220/501 (43%), Gaps = 14/501 (2%) Query: 14 EYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 Y+V+EL+ ++ ++ V + GE+S + SGH YFS++D + + ++++ Sbjct: 12 VYTVAELAGSVRQGIDRLFPGPVSLTGELSNVKLSQPSGHYYFSIRDAVASLRGVMFRSA 71 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + F P EG++ L+ G+++ + + QI+++ + P+G G + + L +EG Sbjct: 72 ARSLSFQPAEGLKVLLRGRLSYYEARGEVQIVVDRMGPAGLGLFFQEFARVRDLLAKEGA 131 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 S + K PIP P+ +A+ITSP GA + D L+ + + V++ P +VQG E ++ Sbjct: 132 LSPERKRPIPVFPRKVALITSPQGAAVWDFLRICDQQNRLVPVVVIPARVQGFEAATDLL 191 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A ++ L P D+++L RGGGS EDL +N E + RAI +P+++AIGHE Sbjct: 192 RAFSEVPHL------PGVDVVVLTRGGGSAEDLMVYNREDVARAILACPVPVVTAIGHEV 245 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D ++AD ADLR TPT AA+ L + I R+ ++ + L + Sbjct: 246 DVSVADLVADLRVATPTEAAKRVFFDGAQLMETAILSRRRILGAFSSRLREEQGRLRAFR 305 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 + + + +S L R L ++ + R + R+ I + + Sbjct: 306 EGAGHLSRRISRLHLALVRGQEGLSQLIQGKVGRLSGDLRDLAGRLV--HPSSQIIRQGR 363 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E+ ++ ++ + E+ + H L + L +L + + Sbjct: 364 RLSERAGYLVRLFLAR---LSSERTAMLGFQHRLDRPDPIGVGILRERHARLKNGLALAM 420 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRILINFF 490 +++ + I L S L G+ + + + +T + +L Sbjct: 421 GNRLSREDRTFVILRSGLFSHDPGRPLASGFFLLSRPESGTLVTASNPPSVGDTLLGKTR 480 Query: 491 DGQANAIVINKAPPKEQPTKK 511 + VI+ E+ + Sbjct: 481 HLSLSLKVIDVRAESEEKNGR 501 >gi|319941959|ref|ZP_08016280.1| exodeoxyribonuclease VII large subunit [Sutterella wadsworthensis 3_1_45B] gi|319804612|gb|EFW01482.1| exodeoxyribonuclease VII large subunit [Sutterella wadsworthensis 3_1_45B] Length = 506 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 121/502 (24%), Positives = 208/502 (41%), Gaps = 27/502 (5%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77 S + + +E L + + GE++ + S GH YFSLKD + + +++ L + Sbjct: 2 SAALRRMTNALEGVLDGIWITGEVAEV-SLSSLGHLYFSLKDEVALLSCAMFRSALGRGP 60 Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137 ++G ++G++ + + Q++ P+G G+L A K K KL EGLF+ + Sbjct: 61 I-FQKGDRIELLGRVDIYAPRGRLQMVGTRWRPAGVGSLYEAFLKLKAKLEAEGLFAPER 119 Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196 K PIP + +A++TS A D+L+ + R P ++++ VQG + P + +A++ Sbjct: 120 KKPIPRFVRRVALVTSAQAAAYGDVLRTLERRTPWVKIMHVDSLVQGADAPASLISALIA 179 Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256 L PD+I+L RGGGS EDL FNDE + R IA S+P+I +GHE D+T+A Sbjct: 180 AQALT-------PDVILLVRGGGSYEDLQAFNDEELARTIAALSVPVICGVGHEADFTIA 232 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D+AADLRA TPT AAE P ++ L L R ++ +S LP Sbjct: 233 DFAADLRASTPTAAAESIGPDRDAWLRRLDKCADMLERAAERAYQHAAQRFDSAAAHLPA 292 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH-----FNHIINRIKSDFLIHNIQKNRQ 371 D+ L + L + + + R +++ + Sbjct: 293 EDRLLQPWEQAMINARVRLCNAAQGRLADAERAAEGAGLRWRTAADFITPRQIRLERAAR 352 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E + V+ ++ +A + + + L + L Sbjct: 353 FLAEPDLCLRAPVQHLTAAAERFRRLGLAAEERRGTEVERQTKALSFFAHHALEAAAARL 412 Query: 432 S----------HKIKSCHTSVSITTRILQSFAYKNTLKRGYT-SIQDTNNNFITQKRNLA 480 +I + V + L L+ GY + D + ++ L Sbjct: 413 DRALRLRPDPMREINAAQRRVELAANALSLADPNRPLRAGYARIVTDAD-LVVSHAAELR 471 Query: 481 TKTRILINFFDGQANAIVINKA 502 + + I F DG A A V Sbjct: 472 RGSAVRILFADGFAAAEVQEIT 493 >gi|154173884|ref|YP_001408869.1| exodeoxyribonuclease VII large subunit [Campylobacter curvus 525.92] gi|112803710|gb|EAU01054.1| exodeoxyribonuclease VII, large subunit [Campylobacter curvus 525.92] Length = 387 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 113/302 (37%), Positives = 175/302 (57%), Gaps = 9/302 (2%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ K ++E+ +V V+GEIS HSSGH YF+LKD + I A++++ Sbjct: 2 LSVSELNEQAKSLLETTFDYVEVKGEISRLT-KHSSGHWYFTLKDEKAAISAVMYRMNNA 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++F + ++ ++ GK + + S YQ++ +L P G G L A + K++L EGLF Sbjct: 61 KLKFDMTDAMKVVIYGKASLYTPSGSYQLVATTLRPDGEGELELAFRQLKERLEREGLFE 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 HK PIP +PK IA++TS T A ++D+L+ +S R+ L +++IF QG+ P + A Sbjct: 121 ISHKKPIPRLPKRIALVTSSTSAALQDMLKVVSTRWKLSKILIFDAFTQGENAPSSLIRA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + D+I+LARGGGS EDLW FNDE + RAI +++ P++SAIGHE D+ Sbjct: 181 LKKADLS-------GADVIVLARGGGSREDLWCFNDEGLARAIYDAATPVVSAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RA TP+ A +P E + LE L +I + K + L L Sbjct: 234 VISDFVADRRALTPSAAMLDILPDSEAFLQYIDKLEDELRGVIGLKLANKKSRLEILASK 293 Query: 314 LP 315 Sbjct: 294 FS 295 >gi|331082308|ref|ZP_08331434.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 6_1_63FAA] gi|330400794|gb|EGG80395.1| exodeoxyribonuclease VII [Lachnospiraceae bacterium 6_1_63FAA] Length = 403 Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats. Identities = 119/371 (32%), Positives = 201/371 (54%), Gaps = 13/371 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSV +++ ++K++ + + + V ++GE+S + H+SGH YFSLKD + +++ Sbjct: 2 NSIYSVGQVNNYIKNMFQQDFLLNKVSIKGEVSNCK-YHTSGHIYFSLKDETGALACVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F + G + +V G ++ + KYQ+ + + G+G L K +L E Sbjct: 61 AGQRKGLAFPMKNGDKVVVSGSVSVYERDGKYQLYAKEITLEGAGLLYERFLALKAELEE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F+ ++K PIP K + ++T+PTGA I+DI R P +++I++P VQGD + Sbjct: 121 MGMFAKEYKQPIPAYAKTVGIVTAPTGAAIQDIRNVAGRRNPYVQLILYPALVQGDGAKE 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I +L+ D++++ RGGGS+EDLW FN+E + RAI N PIISA+G Sbjct: 181 SIIEGIEKLDA-------YGVDVMLVGRGGGSVEDLWAFNEEEVARAIFNCKTPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+AV + SL N +L+ + I+ + Sbjct: 234 HETDTTIADFVADLRAPTPSAAAELAVADIRGVFQSLENYRQKLSRNLENKIQLLQQQIK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + + + R RL L ++ +E +F ++ N I R+K + + Sbjct: 294 YYENRLLYGSPEFQIREKRTRLLDLESRIQSAMEGQLFHARQNLNIYIERMKGLSPLEKL 353 Query: 367 QKNRQHILEKQ 377 + ++ KQ Sbjct: 354 NQGFSYVENKQ 364 Score = 103 bits (256), Expect = 9e-20, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 53/136 (38%), Gaps = 2/136 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + +Q + + ++ ++ + + K L L + +I T + L +RI+ Sbjct: 268 QSLENYRQKLSRNLENKIQLLQQQIKYYENRL--LYGSPEFQIREKRTRLLDLESRIQSA 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + ++ +++I ++ + L +G++ +++ +T + + I Sbjct: 326 MEGQLFHARQNLNIYIERMKGLSPLEKLNQGFSYVENKQGCAVTSISQVKVGEELKIQVT 385 Query: 491 DGQANAIVINKAPPKE 506 DG V + K Sbjct: 386 DGTIITKVTDVKKEKR 401 >gi|56417297|ref|YP_154371.1| exodeoxyribonuclease large subunit [Anaplasma marginale str. St. Maries] gi|81821242|sp|Q5P9B4|EX7L_ANAMM RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|56388529|gb|AAV87116.1| exodeoxyribonuclease large subunit [Anaplasma marginale str. St. Maries] Length = 397 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 146/364 (40%), Positives = 223/364 (61%), Gaps = 11/364 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ S + PE++V+E++ ++ ++ + +RGEISG SSGH Y SLKD+ Sbjct: 1 MSLRSCSTEM-IPEFTVTEITDLVRQVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDD 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +S I A+ W GT +++ E G+E + G ++T+ S+YQ++IE ++ +G G L L Sbjct: 59 NSVISAVCWNGT--RLDVQFENGLEVICTGHLSTY--QSRYQLVIEGMVLAGQGKLAAML 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+R+KKL +EGLF K P+P +P I VITSPTGAVIRDIL R+ RFP +I++PV+ Sbjct: 115 EERRKKLEKEGLFDQARKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQ 174 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + + AIL N L+E PD+II+ARGGGSIEDLW FNDE + R A S Sbjct: 175 VQGSQASAMVVQAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTTAASK 229 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IPI+SAIGHETD+T+ DYAAD+RAPTPT A E+ +P ++ L S + + +++ + + ++ Sbjct: 230 IPIVSAIGHETDFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDIAHKLSKIRSAVRNVL 289 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 K + L L L + +S ++E ++ + +K ++ +++I RI Sbjct: 290 GAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIEFLFKVALLKKQQYLDNLIGRIDRY 349 Query: 361 FLIH 364 H Sbjct: 350 NKEH 353 Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 53/130 (40%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ ++ H ++ +R + K+ ++ L+ + +TK++I + +IE Sbjct: 266 ERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIE 325 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F+ + + + + ++ + GY I D ++ +A I+I Sbjct: 326 FLFKVALLKKQQYLDNLIGRIDRYNKEHIISVGYAVIYDNTGQHVSSANAVAPDDTIVIE 385 Query: 489 FFDGQANAIV 498 + DG+ A + Sbjct: 386 WKDGKRRAAI 395 >gi|260222817|emb|CBA32764.1| Exodeoxyribonuclease 7 large subunit [Curvibacter putative symbiont of Hydra magnipapillata] Length = 456 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 111/383 (28%), Positives = 182/383 (47%), Gaps = 9/383 (2%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 N L + V L L + + + V V GE+SG+ +SGH YFSLKD ++ Sbjct: 25 MEDANPLRR-VWRVDALCRALADTLNARFNPVRVTGELSGF-SRAASGHCYFSLKDQDAQ 82 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I ++K ++F P +G V G++ + Q+I+ES+ G GTL + Sbjct: 83 IRCAMFKRAATNLDFAPRDGELVEVSGRLDIYGPRGDLQLIVESMRRQGQGTLFEEFVRL 142 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K +L +GLF K P+P +P+ I ++TS A + D+ + R P + V + P VQ Sbjct: 143 KARLEAQGLFDPARKRPLPAMPRSIGLVTSLGAAALHDVATTLRRRVPHIPVFLAPAAVQ 202 Query: 183 GDECPKEIANAILQLNTL--KEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 GD P E+ ++ L + D+I+L RGGGS+EDLW FNDE + I+ S Sbjct: 203 GDAAPGELVQSLQALMSRAVDVDGRGTPLDVILLVRGGGSMEDLWAFNDEQLALTISGSP 262 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P++S +GHETD+T+AD+ AD+RAPTPT AAE+ +++ L RL + R++ Sbjct: 263 VPVVSGVGHETDFTIADFVADVRAPTPTAAAELVATPGAVCEAAADLLMDRLVSATHRVL 322 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+ + ++ RL L L L + + + ++ Sbjct: 323 DTQSQRLDRVAARAGRPSGLVAAHAMRLQSLGHGLRSALFAKVRAESARGQALGLKL--- 379 Query: 361 FLIHNIQKNRQHILEKQQHIEQI 383 +R Q+ ++ Sbjct: 380 -PSVRQAWSRGQAERLQRAELRL 401 Score = 77.9 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 3/138 (2%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLR---YIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + + + Q ++++ + R + ++ H LR ++ Sbjct: 313 RLVSATHRVLDTQSQRLDRVAARAGRPSGLVAAHAMRLQSLGHGLRSALFAKVRAESARG 372 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + L ++ + + + L LKRGY + D +T + L Sbjct: 373 QALGLKLPSVRQAWSRGQAERLQRAELRLGLLDPSLVLKRGYAWLTDKQGVAVTGVKKLE 432 Query: 481 TKTRILINFFDGQANAIV 498 ++ DG + V Sbjct: 433 PGEQVHATLSDGTVDLSV 450 >gi|222475661|ref|YP_002564078.1| exodeoxyribonuclease large subunit (xseA) [Anaplasma marginale str. Florida] gi|255003653|ref|ZP_05278617.1| exodeoxyribonuclease large subunit (xseA) [Anaplasma marginale str. Puerto Rico] gi|254783686|sp|B9KHB8|EX7L_ANAMF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|222419799|gb|ACM49822.1| exodeoxyribonuclease large subunit (xseA) [Anaplasma marginale str. Florida] Length = 397 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 147/364 (40%), Positives = 223/364 (61%), Gaps = 11/364 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ S + PE++V+E++ ++ ++ + +RGEISG SSGH Y SLKD+ Sbjct: 1 MSLRSCSTEM-IPEFTVTEITDLVRQVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDD 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +S I A+ W GT +++ E G+E + G I+T+ S+YQ++IE ++ +G G L L Sbjct: 59 NSVISAVCWHGT--RLDVQFENGLEVICTGHISTY--QSRYQLVIEGMVLAGQGKLAAML 114 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E+R+KKL +EGLF K P+P +P I VITSPTGAVIRDIL R+ RFP +I++PV+ Sbjct: 115 EERRKKLEKEGLFDQARKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQ 174 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + + AIL N L+E PD+II+ARGGGSIEDLW FNDE + R A S Sbjct: 175 VQGSQASAMVVQAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTAAASK 229 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IPI+SAIGHETD+T+ DYAAD+RAPTPT A E+ +P ++ L S + + +++ + + ++ Sbjct: 230 IPIVSAIGHETDFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDIAHKLSKIRSAVRNVL 289 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 K + L L L + +S ++E ++ + +K ++ +++I RI Sbjct: 290 GAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIEFLFKVALLKKQQYLDNLIGRIDRY 349 Query: 361 FLIH 364 H Sbjct: 350 NKEH 353 Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 53/130 (40%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ ++ H ++ +R + K+ ++ L+ + +TK++I + +IE Sbjct: 266 ERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIE 325 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F+ + + + + ++ + GY I D ++ +A I+I Sbjct: 326 FLFKVALLKKQQYLDNLIGRIDRYNKEHIISVGYAVIYDNTGQHVSSANAVAPDDTIVIE 385 Query: 489 FFDGQANAIV 498 + DG+ A + Sbjct: 386 WKDGKRRAAI 395 >gi|158604940|gb|ABW74757.1| exodeoxyribonuclease VII, large subunit [Campylobacter concisus 13826] Length = 388 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 119/332 (35%), Positives = 183/332 (55%), Gaps = 11/332 (3%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVSEL+ K ++E+ L +V V GEIS H+SGH YF+LKD S I A++++ Sbjct: 2 LSVSELNEKAKALLEATLDYVEVSGEISRLT-KHASGHWYFTLKDEKSSISAVMYRMNNQ 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++FLP+EG++ + GK+T + S YQ++ +++P G G L A + K+KL EGLF Sbjct: 61 KVKFLPKEGLKVKIYGKVTIYSPSGSYQLVASAMLPDGEGELELAFRQLKEKLENEGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 K IP +PK IA++TS T A ++D+L+ + R+ L + IF QG+ P + + Sbjct: 121 ISAKKEIPNLPKKIALVTSATSAALQDMLKVVKSRWRLSEIYIFDALTQGESAPSSLIKS 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + D+I+LARGGGS EDLW FNDE + R I + P+ISAIGHE D+ Sbjct: 181 LRRADK-------YGVDVIVLARGGGSKEDLWCFNDEGLAREIYATKTPVISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD R+ TP+ A +P +E L L L++ + I K N LN LL Sbjct: 234 VISDFVADRRSLTPSAAMLDLLPDEEAFFQYLDRLSDDLDSALNLKITKKQNLLNLLLSK 293 Query: 314 LPN--SDQTLSCSRYRLDRLPRELEHNLEIII 343 + + + L + ++ I Sbjct: 294 FSSNALKARIELKFSEVANKQNALTNAVQRKI 325 >gi|300814950|ref|ZP_07095178.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300510920|gb|EFK38192.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 534 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 143/534 (26%), Positives = 238/534 (44%), Gaps = 61/534 (11%) Query: 17 VSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 V EL+ +LK IV + S++ V GEIS ++ H +G+ YFSLKD+ SRI+AII+ Sbjct: 6 VKELNSYLKKIVSMDFLLSNIAVEGEISNFKA-HENGNLYFSLKDDFSRINAIIFYKNAI 64 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++F E+G++ + G + + S+ + I +I SG L + KKKL +EGLF Sbjct: 65 NLDFKMEDGLKIIAKGSVNYYEKDSQITLYISEIISHSSGNLYAEFVRLKKKLSKEGLFD 124 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 HK IP PK I +ITS +GA ++DI+ + R L +IIFP VQGD+ P ++ Sbjct: 125 PGHKLKIPTFPKTIGIITSASGAAVKDIVNMLKMRNNLANIIIFPSLVQGDDAPSDLIEG 184 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N ++ D+IIL RGGGS EDL+ FNDE + +AI NS+IPIISA+GHE D+ Sbjct: 185 IKYFNDRED------IDLIILGRGGGSFEDLFCFNDENLAKAIYNSNIPIISAVGHEVDY 238 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 +++D+ AD+RA TPT AAE+A+ K+ L +L + LN+ + ++I L + Sbjct: 239 SISDFVADMRAATPTKAAEIAIISKKELSENLKSNYELLNSSLNKIIFDMREKLANYGNL 298 Query: 314 LPNSDQT------LSCSRYRLDRLPRELEHNLEII----------IFRKYRHFNHIINRI 357 L + R +RL L+ ++ I + Sbjct: 299 LRIFCPLKDILVNKDNLKDRFNRLNISLKSSVFNNQKILEYGVKSIKSYDFKIEERKVYL 358 Query: 358 KSDFLI------HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL--------- 402 + L I + + + + Q LR + K L Sbjct: 359 EDKKLTLVSGLSQKINIETNKLNYYYKLLNYNMFQLLRSNSISLKNFKYYLKTYKVSDEI 418 Query: 403 ---HMLREQTKNRIFYLHTHIKKLITR---------IEFILSHKIKSCHTSVSITTRILQ 450 ++ ++R+ + + + + + IK+ ++ L Sbjct: 419 LKKNLYLHALESRLKVMDFKTDFRYKKDYLYNKKYILNNLTLNIIKNERNKLNTLIYNLN 478 Query: 451 SF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + + + + + R + + I+ +G A A + + Sbjct: 479 TLYNDINKV------KVYLKDGSLLKDIRQINEGDFLNIHLKNGVAKAQIKDIE 526 >gi|224437774|ref|ZP_03658721.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG 18818] gi|313144220|ref|ZP_07806413.1| exodeoxyribonuclease 7 large subunit [Helicobacter cinaedi CCUG 18818] gi|313129251|gb|EFR46868.1| exodeoxyribonuclease 7 large subunit [Helicobacter cinaedi CCUG 18818] Length = 417 Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats. Identities = 113/373 (30%), Positives = 186/373 (49%), Gaps = 7/373 (1%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 VSEL+ +K I+E VCV+GEIS + H+SGH Y S+KD S I +++KG + Sbjct: 6 VSELNTQIKAILEQTFLDVCVQGEISSVKV-HTSGHIYLSIKDEDSNIKCVMFKGNARGL 64 Query: 77 EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136 + E G +++G ++ + +YQI+ +S+ +G G A E K KL +G F Sbjct: 65 KITLEVGQSIVIMGSVSVYTQKGEYQILCKSITLAGVGEFALAFENLKNKLQTKGYFESF 124 Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAIL 195 HK P+P PK IA++TS TGA D+L+ R+ + + +F VQG+ + I + Sbjct: 125 HKKPMPKFPKRIALLTSATGAAKEDMLKVAQKRWNLVHITLFDTLVQGENAKECIVANLA 184 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255 ++ T D+I+L RGGGS+ED+W FN+E + AI + PIISA+GHE D + Sbjct: 185 LADSFF--GTKEGFDVIVLGRGGGSMEDMWAFNEECVAEAIYRAKTPIISAVGHEVDVFI 242 Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA-- 313 +D+ ADLRAPTP+ A EM +P K + + + +++ R + K + L + Sbjct: 243 SDFVADLRAPTPSAAMEMLLPDKFEFLRIIDEMMSAYSSVFERYLGQKQRLIGQLKEYFK 302 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L N R ++ L + N I+ +K + + + + Sbjct: 303 LYNFQSQYINKREQIQALGQIFVENFRNILEKKQGEIERV-KMLIDVAFERKLTHAQMEC 361 Query: 374 LEKQQHIEQIVKQ 386 + ++ + Sbjct: 362 ERLFEALKASNPR 374 Score = 40.9 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 57/160 (35%), Gaps = 4/160 (2%) Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHILEKQQHIEQIVKQH 387 D +E+++ K+ I + + + +Q ++ + + ++ Sbjct: 248 DLRAPTPSAAMEMLLPDKFEFLRIIDEMMSAYSSVFERYLGQKQRLIGQLKEYFKLYNFQ 307 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 +YI ++++ A+ + E +N + I+++ I+ K+ Sbjct: 308 SQYI-NKREQIQALGQIFVENFRNILEKKQGEIERVKMLIDVAFERKLTHAQMECERLFE 366 Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L++ ++ K GY I + +++A + Sbjct: 367 ALKASNPRSLCKNGYAQISKEQKVCV--LQDIAVNEVFEL 404 >gi|323143959|ref|ZP_08078615.1| exodeoxyribonuclease VII, large subunit [Succinatimonas hippei YIT 12066] gi|322416260|gb|EFY06938.1| exodeoxyribonuclease VII, large subunit [Succinatimonas hippei YIT 12066] Length = 489 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 129/492 (26%), Positives = 220/492 (44%), Gaps = 42/492 (8%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVS + + N V GEIS + H YF LKD + +D +++ LN+ Sbjct: 33 SVSRFVSVTNNAL-QNFGQAVVIGEISEIKTYS---HLYFKLKDETAAVDCLMFASVLNR 88 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F+P+ G++ +V+GK + + + ++++I++ + +G+G ++ L K+KL +EG+F+ Sbjct: 89 LSFIPKIGMKVVVVGKSSIYLKTGQFKLIVDKMFVAGAGKIMEELLALKEKLNKEGVFAA 148 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + PIP + +ITS G V+ D+L ++ R P + V+++P +VQG E P I Sbjct: 149 IKR-PIPKWINKVGIITSKEGHVLHDMLTVLNKRNPGIEVVVYPCQVQGSEAPATIV--- 204 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N L + D++I+ RGGGS EDL F+DE +VR I NS +PIISA+GHE D Sbjct: 205 ---NALNTAFSDNVCDVLIVGRGGGSFEDLMPFSDETVVRTIINSPMPIISAVGHEPDVA 261 Query: 255 LADYAADLRAPTPTGAAEMA-VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D+AAD+RAPTPT AA++ E +Q L + L ++I + I L Sbjct: 262 LSDFAADMRAPTPTAAADIVSSYTVEMMQKDLDSYALLLGDLIYKKIDDLTVVLEKAEIK 321 Query: 314 LPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + + L+ L+ L + + + + ++R+++ + Sbjct: 322 LKSFGPESLLNLKSSYLNSLNEKFARLIFDKLAFCKAQNDSFLHRLQAHDPKFKLNSLDL 381 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI- 430 + E ++ IE V + I HI L+ +E Sbjct: 382 AVNEFEKRIEFTVNDN-------------------------IAKTAKHIDNLLLLMERAP 416 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + L S LKRGY+ D + L + Sbjct: 417 FHQDMIDADKKIETLKEKLISLNPLLVLKRGYSVTLDKKGS-CANINTLKINDELKTLVA 475 Query: 491 DGQANAIVINKA 502 GQ ++V Sbjct: 476 GGQVLSVVTGIE 487 >gi|124486100|ref|YP_001030716.1| exodeoxyribonuclease VII large subunit [Methanocorpusculum labreanum Z] gi|124363641|gb|ABN07449.1| Exodeoxyribonuclease VII large subunit [Methanocorpusculum labreanum Z] Length = 458 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 133/496 (26%), Positives = 218/496 (43%), Gaps = 86/496 (17%) Query: 15 YSVSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLK---DNHSRIDAIIWK 70 SVSEL+ ++ +V+ L+ + VRGEI+GYR ++SGH YFSL DN + I ++WK Sbjct: 41 LSVSELAKRIREVVDCPLLTDIIVRGEITGYR-PNASGHLYFSLTEQGDNPASISCVMWK 99 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS--GSGTLLTALEKRKKKLL 128 ++ + F ++G+ G + +P + Q II+ + P+ G L E+ +K+L Sbjct: 100 YSVKNLPFSVKDGLLVQATGLVDFYPAGGRLQFIIKKMEPAVSGKAGLYLLKEQWRKELE 159 Query: 129 EEGLFSDQHKNPIPF--IPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDEC 186 +G+ P+ I V+TS TG+V++DI IS R+PL +++ VQGD Sbjct: 160 AKGIIPRPQAEMRDPPLFPRNIGVVTSKTGSVLQDIKNVISRRYPLPILLAGTSVQGDGA 219 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I AI L + D+II+ARGGGS EDL+ FN +V AI NS++PIISA Sbjct: 220 EVGIVAAIRSL--------QDKADVIIIARGGGSFEDLFVFNHPDVVTAIRNSTVPIISA 271 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD TL+D+AAD R PTP+ AAE V Sbjct: 272 VGHETDTTLSDFAADRRVPTPSAAAETVV------------------------------- 300 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 D+++ + DR + ++ + +H + R++ + L + Sbjct: 301 ----------PDRSVLLEKLEKDRRSIHDRMSW--LLSVEQKHVADLKIRVEPNRLTRKL 348 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q E ++ I + R+ H Sbjct: 349 ELMHQQTAELEERIRRACL-------------------------RRLSVEHEACSAWSVM 383 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 I+ + +KI + + I+ L+RGY + + +N+A R+ Sbjct: 384 IQKGVKNKITTARLVLLAQKEIILGRDPYKPLERGYALVW-KEGTLVRSVKNIAKDDRLS 442 Query: 487 INFFDGQANAIVINKA 502 + DG+ +IV + Sbjct: 443 LKLADGEITSIVESIK 458 >gi|254995462|ref|ZP_05277652.1| exodeoxyribonuclease large subunit [Anaplasma marginale str. Mississippi] Length = 388 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 145/353 (41%), Positives = 219/353 (62%), Gaps = 10/353 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 PE++V+E++ ++ ++ + +RGEISG SSGH Y SLKD++S I A+ W G Sbjct: 2 IPEFTVTEITDLVRQVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDDNSVISAVCWNG 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 T +++ E G+E + G I+T+ S+YQ++IE ++ +G G L LE+R+KKL +EG Sbjct: 61 T--RLDVQFENGLEVICTGHISTY--QSRYQLVIEGMVLAGQGKLAAMLEERRKKLEKEG 116 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF K P+P +P I VITSPTGAVIRDIL R+ RFP +I++PV+VQG + + Sbjct: 117 LFDQTRKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQVQGSQASAMVV 176 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AIL N L+E PD+II+ARGGGSIEDLW FNDE + R A S IPI+SAIGHET Sbjct: 177 QAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTAAASKIPIVSAIGHET 231 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ DYAAD+RAPTPT A E+ +P ++ L S + + +++ + + ++ K + L L Sbjct: 232 DFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLY 291 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + +S ++E ++ + +K ++ +++I RI H Sbjct: 292 GVLTETKHKISEVGRSALAHQEKIEFLFKVALLKKQQYLDNLIGRIDRYNKEH 344 Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 53/130 (40%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ ++ H ++ +R + K+ ++ L+ + +TK++I + +IE Sbjct: 257 ERQQLVSDIAHKLSKIRSAVRNVLGAKEHRLLQLYGVLTETKHKISEVGRSALAHQEKIE 316 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F+ + + + + ++ L GY I D ++ +A I+I Sbjct: 317 FLFKVALLKKQQYLDNLIGRIDRYNKEHILSVGYAVIYDNTGQHVSSANAVAPDDTIVIE 376 Query: 489 FFDGQANAIV 498 + DG+ A + Sbjct: 377 WKDGKRRAAI 386 >gi|282882007|ref|ZP_06290648.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus lacrimalis 315-B] gi|281298037|gb|EFA90492.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus lacrimalis 315-B] Length = 534 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 144/536 (26%), Positives = 250/536 (46%), Gaps = 65/536 (12%) Query: 17 VSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 V EL+ +LK IV + S++ V GEIS ++ H +G+ YFSLKD+ SRI+AII+ Sbjct: 6 VKELNSYLKKIVSMDFLLSNIAVEGEISNFKA-HENGNLYFSLKDDFSRINAIIFYKNAI 64 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++F E+G++ + G + + S+ + I +I SG L + KKKL EGLF Sbjct: 65 NLDFKMEDGLKIIAKGSVNYYEKDSQITLYISEIISHSSGNLYAEFVRLKKKLSNEGLFD 124 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 HK IP PK I +ITS +GA ++DI+ + R L +IIFP VQG+ P ++ Sbjct: 125 PGHKLKIPTFPKTIGIITSASGAAVKDIVNMLKMRNNLANIIIFPSLVQGEGAPSDLIEG 184 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N ++ D+IIL RGGGS EDL+ FNDE + +AI NS+IPIISA+GHE D+ Sbjct: 185 IKYFNDRED------IDLIILGRGGGSFEDLFCFNDENLAKAIYNSNIPIISAVGHEVDY 238 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 +++D+ AD+RA TPT AAE+A+ K+ L +L + LN+ + ++I L++ Sbjct: 239 SISDFVADMRAATPTKAAEIAIISKKELSDNLKSDYELLNSSLNKIIFDMREKLSNYGNL 298 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L +++ ++ L L +L+ +F + + + IKS I++ + Sbjct: 299 LRIFCPLKSILVNKDNLKDRFNRLNISLKSSVFNNQKILEYGVKSIKSYD--FKIEERKV 356 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--------------------KN 411 ++ +K+ + + Q + + +L+ Q + Sbjct: 357 YLEDKKLTLVSGLSQKINIETNKLNYYYKLLNYNMFQLLKSSSISLKNFKYYLKNYKVSD 416 Query: 412 RIFYLHTHIKKLITR-----------------------IEFILSHKIKSCHTSVSITTRI 448 I + +++ L +R + + + IK+ ++ Sbjct: 417 EILKKNLYLQALESRFKAMDFKTDFRYKKDYLYNKKYILNNLSLNIIKNERNKLNTLIYN 476 Query: 449 LQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 L + + + + + R + + I+ +G A A + + Sbjct: 477 LNTLYNDINKV------KVFLKDGSLLKDIRQINEGDFLNIHLKNGVAKAQIKDIE 526 >gi|153810476|ref|ZP_01963144.1| hypothetical protein RUMOBE_00857 [Ruminococcus obeum ATCC 29174] gi|149833655|gb|EDM88736.1| hypothetical protein RUMOBE_00857 [Ruminococcus obeum ATCC 29174] Length = 387 Score = 267 bits (683), Expect = 3e-69, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 178/349 (51%), Gaps = 11/349 (3%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 L + V+GE+S + H+SGH YFSLKD + +++ G + F ++G +V G Sbjct: 8 LQKIYVKGEVSNCK-YHTSGHIYFSLKDETGVLSCVMFAGHRRGLAFRMKDGDRVVVGGA 66 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 + + +YQ+ + + G+G L K +L E G+F+ ++K PIP + V+ Sbjct: 67 VDVYERDGRYQLYAKEISLEGAGALYERFLALKTELEEMGMFAQEYKQPIPAFIHRLGVV 126 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 T+PTGA ++DI R P L++I++P VQG+ I I L+ D Sbjct: 127 TAPTGAAVQDIRNISLRRDPYLQIILYPALVQGEGAADSIVRGIHMLDQA-------EVD 179 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 +II+ RGGGSIEDLW FN+E + RAI PIISA+GHETD+T+AD+ ADLRAPTP+ A Sbjct: 180 VIIVGRGGGSIEDLWAFNEEKVARAIFECRTPIISAVGHETDFTIADFVADLRAPTPSAA 239 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRL 328 AE+AV + ++ L R+ + R + L N + L +R RL Sbjct: 240 AELAVADFRQILQNIAGLRDRMQKAMQRRAELGRAQLMQYQMRFQYLNPEAKLRDNRQRL 299 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 L L ++ I + + R + ++ + + + +++ Sbjct: 300 ADLDELLRRAMKNRIAEERHMLGIYLERYRGLSPLYKLNQGYSFVSDRE 348 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 5/145 (3%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 I +N + ++ Q Q + R ++ + + L + ++ + L Sbjct: 248 RQILQNIAGLRDRMQKAMQRRAELGRAQLMQYQMRFQYL-----NPEAKLRDNRQRLADL 302 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 + + ++I + I + + L +GY+ + D N I + + + Sbjct: 303 DELLRRAMKNRIAEERHMLGIYLERYRGLSPLYKLNQGYSFVSDREGNGIISTKQVHSGD 362 Query: 484 RILINFFDGQANAIVINKAPPKEQP 508 + I+ DG A V + Sbjct: 363 LLEISVTDGVIEAEVRSSRKEDWNK 387 >gi|269958313|ref|YP_003328100.1| exodeoxyribonuclease VII, large subunit [Anaplasma centrale str. Israel] gi|269848142|gb|ACZ48786.1| exodeoxyribonuclease VII, large subunit [Anaplasma centrale str. Israel] Length = 388 Score = 267 bits (682), Expect = 4e-69, Method: Composition-based stats. Identities = 145/353 (41%), Positives = 213/353 (60%), Gaps = 10/353 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 PE++V+E++ ++ ++ + +RGEISG SSGH Y SLKD++S I A+ W G Sbjct: 2 IPEFTVTEVTDLVQRVMHDTFYCIKIRGEISGL-SRPSSGHVYLSLKDDNSVISAVCWNG 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 T +++ E G+E + G ++T+ S+YQ++IE ++ +G G L LE+R+KKL +EG Sbjct: 61 T--RLDVQFENGLEVICTGHLSTY--QSRYQLVIEGMVLAGQGKLAAMLEERRKKLEKEG 116 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF K P+P +P I VITSPTGAVIRDIL R+ RFP +I++PV+VQG + + Sbjct: 117 LFDQARKKPLPLLPLKIGVITSPTGAVIRDILNRVKHRFPSHIIVWPVQVQGSQASAMVV 176 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AIL N L+E PD+II+ARGGGSIEDLW FNDE + R A S IPI+SAIGHET Sbjct: 177 QAILGFNNLEE-----PPDVIIVARGGGSIEDLWPFNDEELARTTAASKIPIVSAIGHET 231 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+ DYAAD+RAPTPT A E+ +P ++ L S + + ++ + + + K + L L Sbjct: 232 DFTIIDYAADVRAPTPTAAVEIVLPERQQLVSDITHRFLKIRSAVRNALSAKEHRLLQLY 291 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + +S L + +K +H +++I RI H Sbjct: 292 GVLTEARHRISEVGRSALAQRARTGLLLRTALLKKQQHLDNLIGRIGRYNKKH 344 Score = 70.6 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 21/130 (16%), Positives = 50/130 (38%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ ++ H ++ +R K+ ++ L+ + + ++RI + R Sbjct: 257 ERQQLVSDITHRFLKIRSAVRNALSAKEHRLLQLYGVLTEARHRISEVGRSALAQRARTG 316 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +L + + + + K+ L GY + D ++ LA ++I Sbjct: 317 LLLRTALLKKQQHLDNLIGRIGRYNKKHILSVGYAIVYDGAGQHVSSANALAANETVVIE 376 Query: 489 FFDGQANAIV 498 + DG+ +A + Sbjct: 377 WEDGKRSAAI 386 >gi|78186228|ref|YP_374271.1| exodeoxyribonuclease VII large subunit [Chlorobium luteolum DSM 273] gi|78166130|gb|ABB23228.1| Exodeoxyribonuclease VII large subunit [Chlorobium luteolum DSM 273] Length = 402 Score = 267 bits (682), Expect = 4e-69, Method: Composition-based stats. Identities = 129/362 (35%), Positives = 197/362 (54%), Gaps = 8/362 (2%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + SVSEL+ +K +ES V V+GE+S + HSSGH Y +LKD ++I A+IW Sbjct: 1 MAEKTLSVSELTKRIKGELESIFPAVSVKGEVSNCK-KHSSGHIYLTLKDEGAQIPAVIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K T +I+ E+GI + G++ +P S +YQ+I +L G G L A +KL Sbjct: 60 KHTAARIKTTVEDGICVIAEGRLEVYPPSGRYQLICSALTEEGEGALQLAFAALLRKLAG 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G FS++ K P P+ I +ITSPTGAVI D+ +S RFP + ++PVKVQG + Sbjct: 120 LGWFSEESKKMPPRFPETIGLITSPTGAVIEDMQNVLSRRFPSAALRLYPVKVQGRDAAL 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + AI N + RPD+II+ARGGGS+ED+ FN+E + AI S+IPIISAIG Sbjct: 180 SVREAISWFNR----ESRNRPDVIIIARGGGSMEDMQAFNEESVAEAIHRSAIPIISAIG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD ADLRA TP+ AAE+AVP L + A + +++ ++ ++ Sbjct: 236 HETDITIADMVADLRAGTPSIAAELAVPDSLELLRHIAAHAATQSGLVMGKVQGAEREVD 295 Query: 309 SLL--KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 S+ A L R++ + + +L+ + + ++ + + Sbjct: 296 SIRGSYAFNRPLSMLQQFEERVEGMRDRMARSLQGTYRNTLQRYQAALSHLNLLDYRKTL 355 Query: 367 QK 368 ++ Sbjct: 356 ER 357 Score = 80.6 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 1/100 (1%) Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 + + + ++ + R+ L ++ L Y+ TL+RGY +Q Sbjct: 304 NRPLSMLQQFEERVEGMRDRMARSLQGTYRNTLQRYQAALSHLNLLDYRKTLERGYVLVQ 363 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 N +T R+L + + F DG A + K + Sbjct: 364 -KEGNVVTDGRSLKESEAVELWFHDGTIPASLTGKLRSRP 402 >gi|313887975|ref|ZP_07821653.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845930|gb|EFR33313.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 483 Score = 267 bits (682), Expect = 4e-69, Method: Composition-based stats. Identities = 130/499 (26%), Positives = 223/499 (44%), Gaps = 25/499 (5%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + ++VSEL+ ++K ++ + L + + GEI+ H +G+ YFSLKD +RIDA+ Sbjct: 1 MAKSAFNVSELNNYIKKLISMDYILRDINITGEITNLNF-HKNGNIYFSLKDKFARIDAM 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 + I+ +G + + G +T + S + + I + G G L K+KL Sbjct: 60 ---ASQEDIKINLFDGAKVMAKGTVTYYERSGRVFLYISQMDLDGKGNLYQEYLDLKEKL 116 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 +EGLF +HK + P I +ITS +GA IRD++ R + ++P VQG Sbjct: 117 TKEGLFDPRHKKSLKKYPSRIGLITSTSGAAIRDVINIFRKRNKTCDIFVYPSLVQGAYA 176 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + + N + D II+ARGGGS EDL+ FNDE + R I S IP+ISA Sbjct: 177 AESLIAGVKYFNQEEP------VDTIIIARGGGSFEDLFVFNDEGLAREIFASKIPVISA 230 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE D+T+ D+ AD+RA TPT AAE+ ++ + S L +++L N++ R + Y Sbjct: 231 VGHEVDYTICDFVADMRAATPTNAAELVTLSEDEIISELEKKKSQLKNLMDRRLDYNRLR 290 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L +L K + +Q + D L ++ II + + L Sbjct: 291 LLNLYKNISIKNQIYKINERTRDLLRAHALLNSAMKKIIEGHEYDLQEKRFYLGNFKL-- 348 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 K + I ++ I + + + +L K+ + H K Sbjct: 349 ---KESKEIENYSYRLKNISVNINSRLNKDIESLNFDKKLLNYYFKSYVNDNHRKFKPFE 405 Query: 425 TRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 LS ++K+ +++ L S ++ K I ++ + R+ + Sbjct: 406 KFFATYDLSLRLKNERNRLNLLKMGLDSA-FEKINK---VEILGSDGKSLKSARDASLGD 461 Query: 484 RILINFFDGQANAIVINKA 502 I + F DG+ + V Sbjct: 462 IISLKFKDGKLESKVQKVE 480 >gi|315303026|ref|ZP_07873737.1| exodeoxyribonuclease VII, large subunit [Listeria ivanovii FSL F6-596] gi|313628608|gb|EFR97030.1| exodeoxyribonuclease VII, large subunit [Listeria ivanovii FSL F6-596] Length = 329 Score = 267 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 124/331 (37%), Positives = 192/331 (58%), Gaps = 12/331 (3%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + +++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPTSGHLYFTVKDEFAMLRSVMFQ 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGIGALYIQLEQLKSHLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VII+P VQGD+ ++ Sbjct: 125 GLFAEAHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIIYPTIVQGDKAAQK 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I +N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGLINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD++L+D++AD+RA TPT AAE+AVP L+ L + RL +L++ K L Sbjct: 239 ETDFSLSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAATRQLLERKERKLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHN 338 L + L L R D L+ Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFSERLKSA 329 >gi|260588124|ref|ZP_05854037.1| exodeoxyribonuclease VII, large subunit [Blautia hansenii DSM 20583] gi|260541651|gb|EEX22220.1| exodeoxyribonuclease VII, large subunit [Blautia hansenii DSM 20583] Length = 403 Score = 267 bits (681), Expect = 4e-69, Method: Composition-based stats. Identities = 117/370 (31%), Positives = 200/370 (54%), Gaps = 13/370 (3%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + YSV +++ ++K++ + + + + ++GE+S + H+SGH YFSLKD + +++ Sbjct: 2 NSIYSVGQVNNYIKNMFQQDFLLNKISIKGEVSNCK-YHTSGHIYFSLKDETGALACVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + F + G + +V G ++ + KYQ+ + + G+G L K +L E Sbjct: 61 AGQRKGLAFPMKNGDKVVVSGSVSVYERDGKYQLYAKEITLEGAGLLYERFLALKAELEE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G+F+ ++K PIP K + ++T+PTGA I+DI R P +++I++P VQGD + Sbjct: 121 MGMFAKEYKQPIPAYAKTVGIVTAPTGAAIQDIRNVAGRRNPYVQLILYPALVQGDGAKE 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I +L+ D++++ RGGGS+EDLW FN+E + RAI N PIISA+G Sbjct: 181 SIIEGIEKLDA-------YGVDVMLVGRGGGSVEDLWAFNEEEVARAIFNCKTPIISAVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+ ADLRAPTP+ AAE+AV + SL N +L+ + I+ + Sbjct: 234 HETDTTIADFVADLRAPTPSAAAELAVADIRGVFQSLENYRQKLSRNLENKIQLLQQQIK 293 Query: 309 SLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + + + R RL L ++ +E IF ++ N I R+K + + Sbjct: 294 YYENRLLYGSPEFQIREKRTRLLDLENRIQSAMEAQIFHARQNLNIYIERMKGLSPLEKL 353 Query: 367 QKNRQHILEK 376 + ++ + Sbjct: 354 NQGFSYVENQ 363 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 53/136 (38%), Gaps = 2/136 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + +Q + + ++ ++ + + K L L + +I T + L RI+ Sbjct: 268 QSLENYRQKLSRNLENKIQLLQQQIKYYENRL--LYGSPEFQIREKRTRLLDLENRIQSA 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +I +++I ++ + L +G++ +++ + +T + + I Sbjct: 326 MEAQIFHARQNLNIYIERMKGLSPLEKLNQGFSYVENQTGSAVTGISQVKVGEELKIQVT 385 Query: 491 DGQANAIVINKAPPKE 506 DG V + K Sbjct: 386 DGTIITKVTDVKKEKR 401 >gi|264678956|ref|YP_003278863.1| exodeoxyribonuclease VII large subunit [Comamonas testosteroni CNB-2] gi|262209469|gb|ACY33567.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni CNB-2] Length = 433 Score = 267 bits (681), Expect = 5e-69, Method: Composition-based stats. Identities = 119/415 (28%), Positives = 210/415 (50%), Gaps = 21/415 (5%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 + V L + + +++ + V VRGE+SG+ +SGH YF+LKD +I +++ Sbjct: 2 WEVGALCHAIGDALQARFNPVAVRGELSGF-SRAASGHCYFNLKDASGQIRCAMFRRAAE 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ F P +G V G++ + Q+++ES+ +G G L + K +L EGLF Sbjct: 61 QVGFSPRDGELVEVRGRLGVYEQRGDLQLVVESMQRAGQGALFEQFLRLKAQLESEGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 K P+P +P+ I ++TS A + D++ + R P + V+I P VQG + P+ + A Sbjct: 121 PARKRPLPPLPRGIGLVTSLGAAALHDVVTALRRRVPHIPVVIVPALVQGPQAPQSLVQA 180 Query: 194 ILQLNTLKEGRT------------CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 + +L L + P D I+L RGGGS+EDLW FNDE + R I S + Sbjct: 181 LSKLYRLAQAGNEASGDLRVDSARQPVIDTILLVRGGGSLEDLWAFNDEQLARTIVQSPV 240 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+IS +GHETD+T+AD+ ADLRAPTPT AAE+A +E +L + R++N + R++ Sbjct: 241 PLISGVGHETDFTIADFCADLRAPTPTAAAELAAQPREVWLGALALAQDRMDNAVQRVLD 300 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L+ + L + L+ ++ +L R + L H++ + + R I + Sbjct: 301 RQAQRLDIAAQRLGRPSEQLARNQLQLSRQAQRLRHSMLLKLQR-LAQNQQAIQVNFPNI 359 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 ++++ RQ + ++ + L + A+L + + ++ Sbjct: 360 FQRSLEQQRQTLDRIDLRLQLLDP------RLVLQRGYALLTDQQGRPVTQVRQA 408 >gi|255655208|ref|ZP_05400617.1| exodeoxyribonuclease VII large subunit [Clostridium difficile QCD-23m63] gi|296451193|ref|ZP_06892934.1| exodeoxyribonuclease VII large subunit [Clostridium difficile NAP08] gi|296880455|ref|ZP_06904417.1| exodeoxyribonuclease VII large subunit [Clostridium difficile NAP07] gi|296260014|gb|EFH06868.1| exodeoxyribonuclease VII large subunit [Clostridium difficile NAP08] gi|296428409|gb|EFH14294.1| exodeoxyribonuclease VII large subunit [Clostridium difficile NAP07] Length = 401 Score = 267 bits (681), Expect = 5e-69, Method: Composition-based stats. Identities = 129/357 (36%), Positives = 207/357 (57%), Gaps = 13/357 (3%) Query: 17 VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +SE + ++K I+ + LS++ V+GEIS ++ HSSG+ Y SLKD S+++ +I+K N Sbjct: 8 ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + + GI+ + G I+ + YQ+ I + G G L + K+KL +EGLF Sbjct: 67 R-NLKLDNGIKVIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++K PIP +P I VITSPTGAVIRDI+ I R+P + + ++PV VQGD+ +EI A Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIRRRYPKVNIKLYPVTVQGDKSAEEICEA 185 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N + D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+ Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ +D+RAPTP+ AAE+A P + + L N+++RL+ + I+ L ++ Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRLSKSLTNQIELDQYRLEAVFNK 299 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N T+ +LD++ ++ +E + + I + + + + + Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLRLEDEKLVKIGALLHNLSPLATMDR 356 Score = 80.6 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + +++ + + + + I + + + + + L + + N + Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRLSKSLTNQIELDQYRLEAVFNKINNYLD 305 Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + K+ +I F + + ++ + +L + + T+ RGY+ Q N Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLRLEDEKLVKIGALLHNLSPLATMDRGYSIAQ-KN 364 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 I + L K I I DG ++ Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIEKIE 397 >gi|57238767|ref|YP_179903.1| putative exodeoxyribonuclease VII large subunit [Ehrlichia ruminantium str. Welgevonden] gi|58578688|ref|YP_196900.1| putative exodeoxyribonuclease VII large subunit [Ehrlichia ruminantium str. Welgevonden] gi|58616751|ref|YP_195950.1| putative exodeoxyribonuclease VII large subunit [Ehrlichia ruminantium str. Gardel] gi|57160846|emb|CAH57744.1| exodeoxyribonuclease VII large subunit [Ehrlichia ruminantium str. Welgevonden] gi|58416363|emb|CAI27476.1| Probable exodeoxyribonuclease VII large subunit [Ehrlichia ruminantium str. Gardel] gi|58417314|emb|CAI26518.1| Probable exodeoxyribonuclease VII large subunit [Ehrlichia ruminantium str. Welgevonden] Length = 388 Score = 267 bits (681), Expect = 5e-69, Method: Composition-based stats. Identities = 147/340 (43%), Positives = 211/340 (62%), Gaps = 9/340 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 E++VSE++ +++V +H+ VRGEIS SGH YF+LKD+ + ++A+ W Sbjct: 4 EFTVSEITKIFQNLVHETFNHIKVRGEISNL-SQPKSGHTYFTLKDHQAVLNAVCW--NN 60 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 KIE + G+E + IG +TT+ SKYQIIIES++ SG G L L++RK KL +EGLF Sbjct: 61 TKIEIDLKNGLEVICIGFLTTY--QSKYQIIIESMLLSGIGNLEIMLQQRKAKLEKEGLF 118 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANA 193 K +P +PK I VITS TGA I DIL R+ RFP ++IFPV VQG++ +I NA Sbjct: 119 DQSRKKTLPLLPKTIGVITSTTGAAINDILNRVKSRFPSHIVIFPVLVQGNDAVTQIVNA 178 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I + N PD++I+ARGGGS+EDLW FNDE+IVRAIA S IPI+SAIGHETD+ Sbjct: 179 IHKSN----NTETDCPDVLIIARGGGSVEDLWIFNDELIVRAIAKSRIPIVSAIGHETDF 234 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TL DYAAD+RAPTPT A E+ +P K + + + ++ + + K N L Sbjct: 235 TLVDYAADVRAPTPTAAVEIILPTKIQVTEYINSKFNKIKAALHYTVNTKRNKLLYFHNQ 294 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L + + + +L + ++E L++I+ K ++ N + Sbjct: 295 LEITRHKIKVLKLQLFKHKNKVEILLKVILLNKRQYLNDL 334 Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 46/110 (41%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 Y K+ K+ H E T+++I L + K ++E +L + + ++ Sbjct: 278 HYTVNTKRNKLLYFHNQLEITRHKIKVLKLQLFKHKNKVEILLKVILLNKRQYLNDLYYK 337 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 + + + L+ GY I D N+ I+ + L I I DG AIV Sbjct: 338 ISKYNKEKNLELGYAVIYDKNHQHISSVKKLQKNDIISIELQDGFIKAIV 387 >gi|83590358|ref|YP_430367.1| exodeoxyribonuclease VII large subunit [Moorella thermoacetica ATCC 39073] gi|123524339|sp|Q2RIB5|EX7L_MOOTA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|83573272|gb|ABC19824.1| Exodeoxyribonuclease VII large subunit [Moorella thermoacetica ATCC 39073] Length = 402 Score = 267 bits (681), Expect = 5e-69, Method: Composition-based stats. Identities = 122/363 (33%), Positives = 203/363 (55%), Gaps = 12/363 (3%) Query: 11 DHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +V EL+ +L+ ++ + L++V V+GEIS R +SGH YFSLKD + + ++ Sbjct: 3 EVKVLAVRELTAYLQRLLANDGRLANVWVKGEISNLRS-PTSGHLYFSLKDQAATLRCVM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++G + +G+E + G++ +P YQ+ + + P+G+G AL++ +L Sbjct: 62 FQGRSRGLSLGLRDGLEVIARGQVAIYPRDGVYQLYVAEIFPAGTGLASLALQELTARLE 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGLF+ K P+P +P+ + ++TSPTGA +RD++ RFP + +I+ P +VQG+ P Sbjct: 122 REGLFAADRKRPLPLLPRRVGLVTSPTGAALRDMITISRRRFPGIELILAPARVQGEVAP 181 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +++A A+ L D+II+ RGGGS EDL FN E++ RAI +P+I+A+ Sbjct: 182 RQLALALELLAKR------GGVDVIIIGRGGGSAEDLSAFNTELVARAIYACPVPVIAAV 235 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TLAD AD RAPTP+ AAEMAVPV+ L+ L +L R + ++ L Sbjct: 236 GHETDLTLADRVADRRAPTPSAAAEMAVPVRAELEQRLKSLAERARRGMEHRLELARARL 295 Query: 308 NSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L K+ L Q L + +D L + L + E + + N + R+++ + Sbjct: 296 ERLTKSSGLDRPRQELYYRQQYVDGLEQRLLASWERRSREREQGLNLLAARLEAASPLAI 355 Query: 366 IQK 368 + + Sbjct: 356 LAR 358 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 17/159 (10%), Positives = 53/159 (33%), Gaps = 6/159 (3%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML---- 405 + ++ + E +Q ++ + ++ R + + A L L Sbjct: 243 LADRVADRRAPTPSAAAEMAVPVRAELEQRLKSLAERARRGMEHRLELARARLERLTKSS 302 Query: 406 -REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 ++ + ++Y ++ L R+ + + +++ L++ + L RGY Sbjct: 303 GLDRPRQELYYRQQYVDGLEQRLLASWERRSREREQGLNLLAARLEAASPLAILARGYAV 362 Query: 465 IQDT-NNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + + + R + ++ + +G V Sbjct: 363 CRRPGDGAPLKSSREVLPGEKVEVILKEGLLRCQVEEVG 401 >gi|167585672|ref|ZP_02378060.1| exodeoxyribonuclease VII large subunit [Burkholderia ubonensis Bu] Length = 303 Score = 266 bits (680), Expect = 6e-69, Method: Composition-based stats. Identities = 105/289 (36%), Positives = 174/289 (60%), Gaps = 8/289 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSVLNRAISTMLERSFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQY 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++ A+ Sbjct: 140 ERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGSAEKLVAAV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 N +E D++++ RGGGSIEDLW FNDE + RAIA S++P++S +GHETD+T Sbjct: 200 ETANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAASALPVVSGVGHETDFT 253 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +AD+AAD+RAPTPTGAAE+ P + L + + + L + R+++ + Sbjct: 254 IADFAADVRAPTPTGAAELVSPQRALLLREVSDRQGALARGMRRVLEQR 302 >gi|68171557|ref|ZP_00544934.1| Exonuclease VII, large subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88657931|ref|YP_506887.1| putative exodeoxyribonuclease VII, large subunit [Ehrlichia chaffeensis str. Arkansas] gi|67999023|gb|EAM85697.1| Exonuclease VII, large subunit [Ehrlichia chaffeensis str. Sapulpa] gi|88599388|gb|ABD44857.1| putative exodeoxyribonuclease VII, large subunit [Ehrlichia chaffeensis str. Arkansas] Length = 388 Score = 266 bits (680), Expect = 7e-69, Method: Composition-based stats. Identities = 153/347 (44%), Positives = 215/347 (61%), Gaps = 9/347 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 PE++VSE++ ++ V +H+ VRGEIS SGH YF+LKD+ + ++AI W Sbjct: 2 TPEFTVSEITKIFQNFVHETFTHIKVRGEISNL-SQPKSGHTYFTLKDDAAVLNAICW-- 58 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 K+EF + G+E + G +TT+ SKYQ+I E+++ +G G L LE+RK KL +EG Sbjct: 59 NNTKVEFDLKNGLEVICSGFLTTY--QSKYQLITENMLLAGIGNLKIMLEQRKAKLEKEG 116 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LF +K P+P +PKI VITS TGAVI DIL R+ RFP ++I PV VQG+E +I Sbjct: 117 LFDQSNKKPLPLLPKITGVITSTTGAVINDILNRVKSRFPSHIVISPVSVQGNESINQII 176 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 +AI +LN +PD+II+ARGGGSIEDLW FNDE IVRA+A SSIPI+SAIGHET Sbjct: 177 DAISKLN----NADTNKPDVIIIARGGGSIEDLWIFNDESIVRAVARSSIPIVSAIGHET 232 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TL DYAAD+RAPTPT A E+ +P K L + + ++ + I K L L Sbjct: 233 DFTLIDYAADVRAPTPTAAVEIVLPTKTQLIEHINSKFNKIKTTLHYKINKKKERLFYLH 292 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 L + + + +L ++E L+I++ K + N + N+I Sbjct: 293 NNLIKTKHQIKVLKLQLSEYKNKIEVLLKILLLNKKQSLNALYNKIN 339 Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 34/130 (26%), Positives = 60/130 (46%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + ++E +K L Y +KKE++ LH +TK++I L + + +IE Sbjct: 259 KTQLIEHINSKFNKIKTTLHYKINKKKERLFYLHNNLIKTKHQIKVLKLQLSEYKNKIEV 318 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +L + + S++ + F + TL+ GY + DTN N I+ + L + I I Sbjct: 319 LLKILLLNKKQSLNALYNKINKFNKEKTLEAGYAVLYDTNRNHISSIKKLKSNDIISIEL 378 Query: 490 FDGQANAIVI 499 DG AI+ Sbjct: 379 KDGIIEAIIK 388 >gi|313608934|gb|EFR84688.1| exodeoxyribonuclease VII, large subunit [Listeria monocytogenes FSL F2-208] Length = 328 Score = 266 bits (679), Expect = 8e-69, Method: Composition-based stats. Identities = 120/325 (36%), Positives = 192/325 (59%), Gaps = 12/325 (3%) Query: 13 PEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ ++ +++ E + V VRGEIS + +SGH YF++KD + + ++++ Sbjct: 6 KYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLK-QPASGHLYFTVKDEFAMLRSVMFH 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + KI F+PE+G+ L+ G+I F + +YQ E + P G G L LE+ K +L +E Sbjct: 65 KAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHMEPDGVGALYIQLEQLKSQLEKE 124 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF++ HK +P P +AV+TS TGA +RDIL I R P + VI++P VQG++ ++ Sbjct: 125 GLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIHRRMPSVEVIVYPTIVQGEKAAQK 184 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I ++N D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GH Sbjct: 185 IVENIGKINQR------NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD+ L+D++AD+RA TPT AAE+AVP L+ L + RL + ++++ K +L Sbjct: 239 ETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAERKYRLLAVTRQVLERKERSLEQ 298 Query: 310 LLKALPN--SDQTLSCSRYRLDRLP 332 L + L L R D Sbjct: 299 LKQHLILNGPKHQLEQQMERTDYFS 323 >gi|332653015|ref|ZP_08418760.1| exodeoxyribonuclease VII, large subunit [Ruminococcaceae bacterium D16] gi|332518161|gb|EGJ47764.1| exodeoxyribonuclease VII, large subunit [Ruminococcaceae bacterium D16] Length = 407 Score = 266 bits (679), Expect = 8e-69, Method: Composition-based stats. Identities = 122/363 (33%), Positives = 210/363 (57%), Gaps = 12/363 (3%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + + S++ ++K ++ + LS + VRGE+S Y+ SGH YF+LKD + ++ Sbjct: 4 EASILTPSQVGQYIKGFMDRDRLLSGLLVRGELSNYKMYP-SGHHYFTLKDREGALRCVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++G + F P+ G++ + G++T FP +YQ+ L P G+G L A E+ K++LL Sbjct: 63 FRGDAASLRFRPQNGMQVIAAGRVTVFPRDGQYQMYCVRLTPEGAGDLFVAFEQLKERLL 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 +GLF+ +HK P+P +P IA++TSP GA +RD+L+ + R+P+ +V I PV+VQG+ Sbjct: 123 RQGLFAQEHKKPLPRMPGRIALVTSPAGAAVRDMLRILGARWPMAQVRILPVRVQGEGAA 182 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EIA AI N + D++I RGGGS+EDLW FN+E++ +AI +S+IP+ISA+ Sbjct: 183 EEIAAAIRWANLHQVA------DLVITGRGGGSMEDLWAFNEEVVAQAIYDSNIPVISAV 236 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+AD+ ADLRA TP+ AAE+AVP + + ++L+ + R+ + + + L Sbjct: 237 GHEPDVTIADFVADLRAATPSNAAELAVPDQNEVYAALLGSKQRMEQAMRQRLLRGRQQL 296 Query: 308 NS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L + + R LD R ++ + ++ K + + + + Sbjct: 297 ERLGKSRMLTDPKAYVQDKRVLLDYQSRRMDQAMTNLLAVKRARTGQLAAALDAMSPLKV 356 Query: 366 IQK 368 + + Sbjct: 357 LGR 359 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 2/125 (1%) Query: 381 EQIVKQHLRYIFLEKKEKIAIL--HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 +Q ++Q +R L ++++ L + K + + R++ +++ + Sbjct: 278 KQRMEQAMRQRLLRGRQQLERLGKSRMLTDPKAYVQDKRVLLDYQSRRMDQAMTNLLAVK 337 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 L + + L RGY Q + I+ + A R + DG+ V Sbjct: 338 RARTGQLAAALDAMSPLKVLGRGYAIAQKQDGGIISHTGDAAPGERFRLRVSDGELTCRV 397 Query: 499 INKAP 503 Sbjct: 398 EETDA 402 >gi|154151433|ref|YP_001405051.1| exodeoxyribonuclease VII, large subunit [Candidatus Methanoregula boonei 6A8] gi|153999985|gb|ABS56408.1| exodeoxyribonuclease VII, large subunit [Methanoregula boonei 6A8] Length = 424 Score = 266 bits (679), Expect = 8e-69, Method: Composition-based stats. Identities = 120/372 (32%), Positives = 195/372 (52%), Gaps = 17/372 (4%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-- 61 + ++ +V E+S ++ +++ L + V GE++ Y+ HS GH YFSL + Sbjct: 16 PKTPAVTEAPLTVGEVSSLIEDLLDDRRLQDIRVLGEVTNYKH-HSRGHRYFSLSEKGGG 74 Query: 62 ---SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + I ++W+ +++ F+PE+G+E +V G + + S YQ+ ++ + G G Sbjct: 75 STAAIIRCVMWRTDADRLVFVPEDGMEVVVTGSVRVYAPSGAYQVQVKRMTRGGLGEKYL 134 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 +E+ KK+L EG F+ + K P+P P + V+TS TGAVI DI I+ RFP+ ++I P Sbjct: 135 LVEQWKKELAAEGCFAAERKRPLPAFPARVGVVTSETGAVIHDIRIVIARRFPVEIVISP 194 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG+E +IA AI ++ + D++I+ARGGGS EDL+ FN +VRAIA Sbjct: 195 TAVQGEEAHTDIALAITRVASH--------VDVVIVARGGGSFEDLFAFNHPDVVRAIAA 246 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 +P++SAIGHE D TLAD AAD+RAPTP+ AAE+ VP + L+ +L L +L ++ Sbjct: 247 CPVPVVSAIGHEVDVTLADLAADIRAPTPSAAAELVVPDRRDLRVALGELRCQLGGALLA 306 Query: 299 LIKYKINTLNSLLKALPNSD--QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + L L + + R L LE I R + Sbjct: 307 RVARAQKDVADLRDRLRPQRFCRKIGEKRQATADLSERLERAFVTRIERDRLVLAEMRTA 366 Query: 357 IKSDFLIHNIQK 368 ++ + + Sbjct: 367 LEGRSPRAVLAR 378 Score = 81.0 bits (198), Expect = 4e-13, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 1/110 (0%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 R +K + ++ +I L R+E +I+ ++ Sbjct: 307 RVARAQKDVADLRDRLRPQRFCRKIGEKRQATADLSERLERAFVTRIERDRLVLAEMRTA 366 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 L+ + + L RGY + + L + ++F+DG+ +V Sbjct: 367 LEGRSPRAVLARGYCVAE-KGGTVVRSAGALHKDDHLSLHFYDGRGGVVV 415 >gi|170016837|ref|YP_001727756.1| exodeoxyribonuclease VII, large subunit [Leuconostoc citreum KM20] gi|169803694|gb|ACA82312.1| Exodeoxyribonuclease VII, large subunit [Leuconostoc citreum KM20] Length = 428 Score = 265 bits (678), Expect = 9e-69, Method: Composition-based stats. Identities = 126/499 (25%), Positives = 215/499 (43%), Gaps = 82/499 (16%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRI 64 S + ++S L+ +LK +++ L V V GEIS G H YFS+KD + I Sbjct: 2 SENQKYLTISALTAYLKRKFDADPYLQKVYVTGEISNM-GRRRGRHLYFSIKDPSGRAVI 60 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 A ++ N+++F PEEG++ +G + + + Y II++ + P G G L A E+ K Sbjct: 61 SAAMF-SYANRLKFQPEEGMKINAVGHVQLYEPNGTYAIILDDMTPDGVGALFLAYEQLK 119 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 KKL EGLFS K +P +P+ IAV+TSPTGAVI DI++ + RFP +V+++P VQG Sbjct: 120 KKLSAEGLFSFPKKK-LPLLPRKIAVVTSPTGAVIEDIVRTVQRRFPSAQVVLYPAVVQG 178 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ K I I +++ + D +I+ RGGGSIEDLW FNDEM+ R +A SIP+ Sbjct: 179 EKAAKTIIKQIQRIDK------SNQYDTLIVGRGGGSIEDLWAFNDEMLARTVAELSIPV 232 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +S++G T + + ++ L + Sbjct: 233 VSSVG---------------HETDNTLIDFVADHRAATPTAAAELATPVT---------- 267 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L+ RL+ L L+ L+ I K + + N + Sbjct: 268 -----------------LTQLITRLNELQVRLQLTLQQQIDVKRQRVARVANHVIFQQPD 310 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 Q + + + +EQ+++QH I + + Sbjct: 311 CLYVGYNQRVDQLRHDLEQLMQQH-------------------------IVAARHRLTVV 345 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 R + ++ + + L S + L RG+ + + + + +A + Sbjct: 346 SQRQSQMSQQILQQPREKLQLLAAKLDSMSPLKILVRGF-VVMEKEQQVVKSIQEIAAED 404 Query: 484 RILINFFDGQANAIVINKA 502 ++ + DG A A +I + Sbjct: 405 QVNLRLSDGVAKAKIIETS 423 >gi|121611789|ref|YP_999596.1| exodeoxyribonuclease VII large subunit [Verminephrobacter eiseniae EF01-2] gi|121556429|gb|ABM60578.1| Exodeoxyribonuclease VII large subunit [Verminephrobacter eiseniae EF01-2] Length = 444 Score = 265 bits (678), Expect = 1e-68, Method: Composition-based stats. Identities = 113/384 (29%), Positives = 194/384 (50%), Gaps = 8/384 (2%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + V L + ++ + V VRGEI+G SSGH YFS+KD H ++ Sbjct: 5 PDPIAAARVWEVGALCRAIADALQVRFNPVAVRGEITGLT-RASSGHCYFSIKDMHGQLR 63 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ + ++F P +G + G++ + + Q I+E + +G G L + K Sbjct: 64 CAMFRRAASGLDFAPRDGQLVQLHGRLGVYEARGELQFIVEGMQQAGQGALFEQFLQLKA 123 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L +GLF + K P+P +P+ I ++TSP A + D++ + R P + V++ P +VQG Sbjct: 124 RLELQGLFDNARKRPLPALPRGIGLVTSPGAAALHDVVTALRRRVPHIPVLLVPAQVQGV 183 Query: 185 ECPKEIANAILQLNTL-----KEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 I A+ +L L G P D+I+L RGGGSIEDLW FNDE + R I S Sbjct: 184 AAAPTIIAALAKLYGLAQAAAAPGADTPAIDVILLVRGGGSIEDLWAFNDEQLARMIVQS 243 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P++S +GHETD+T+AD+ ADLRAPTPT AAE+ +E ++L L R+ + R Sbjct: 244 PVPLVSGVGHETDFTIADFCADLRAPTPTAAAELVAQPREFWLAALDLLVGRIRDGAQRQ 303 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L+ L ++ + +L RL + + H + + + + + + Sbjct: 304 LDARHQRLDQAAARLGRPSGLVAGQQLQLARLAQRMRHGVLLKMQQLGQT-QQALQTQLP 362 Query: 360 DFLIHNIQKNRQHILEKQQHIEQI 383 L + ++ + + H+E + Sbjct: 363 QQLRRRLGQHAERLERTALHLELL 386 Score = 90.6 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 49/133 (36%), Gaps = 3/133 (2%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLIT 425 ++ + + Q ++Q + R L +++ + + + + + + L T Sbjct: 300 AQRQLDARHQRLDQAAARLGRPSGLVAGQQLQLARLAQRMRHGVLLKMQQLGQTQQALQT 359 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ L ++ + T L+ + L+RGY + DT +T+ R + Sbjct: 360 QLPQQLRRRLGQHAERLERTALHLELLDPRLVLQRGYALLTDTGGQAVTRVRQARPGAAL 419 Query: 486 LINFFDGQANAIV 498 DG + V Sbjct: 420 RATLADGTVDVTV 432 >gi|299143830|ref|ZP_07036910.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518315|gb|EFI42054.1| exodeoxyribonuclease VII, large subunit [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 420 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 131/489 (26%), Positives = 221/489 (45%), Gaps = 84/489 (17%) Query: 17 VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 V EL+ ++K + + L+ V V GEIS ++ H++G+ YFSLKD++++I+AI++ Sbjct: 6 VRELNKYIKKYIAMDYLLADVTVEGEISNFK-KHTNGNLYFSLKDDYAKINAIMYFSEAC 64 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 I F P+ G +V G ++ F + + + G G L K+ L +EG+F Sbjct: 65 SINFSPKNGDSVIVKGSVSIFEKDGLINLYVRDMKIVGLGDLYERYLSLKESLYKEGIFD 124 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K IP+ P+ + VITSPTGA IRDI+ +S R P + ++++P VQGD ++ Sbjct: 125 ESKKKKIPYFPQRVGVITSPTGAAIRDIINVLSRRNPAVDILLYPSNVQGDFATSQLIEG 184 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + D+II+ RGGGS+E+L+ FNDE + R I + SIPIISA+GHE D+ Sbjct: 185 LNYF-------EKNPVDVIIIGRGGGSLEELFCFNDEELARKIYSMSIPIISAVGHEIDY 237 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ +DLRAPTP+ AAEM KE L++ L L+ RL+ I+ + Sbjct: 238 VISDFVSDLRAPTPSAAAEMVSMSKEDLENRLSLLKNRLDKILQQK-------------- 283 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + + R+D L L E K + LI+ ++ +Q++ Sbjct: 284 -------VEDNTSRIDLLGEILNIKFEKFYANKLESLKKLDLENSKWKLIYKVKYKKQNL 336 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ + Sbjct: 337 ELTFN-----------------------------------------------NLDMKFNK 349 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 KI + L+S + +R Y +++ ++ ++L+ +LI+F DG Sbjct: 350 KISINKNLLYNIGEKLRSSKFT---QRIY--LKNKFGAIVSSVKDLSVGDEVLISFADGT 404 Query: 494 ANAIVINKA 502 A A + Sbjct: 405 ATANISKTK 413 >gi|255306107|ref|ZP_05350279.1| exodeoxyribonuclease VII large subunit [Clostridium difficile ATCC 43255] Length = 401 Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%) Query: 17 VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +SE + ++K I+ + LS++ V+GEIS ++ HSSG+ Y SLKD S+++ +I+K N Sbjct: 8 ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + + G++ + G I+ + YQ+ I + G G L + K+KL +EGLF Sbjct: 67 R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++K PIP +P I VITSPTGAVIRDI+ I R+P + + ++PV VQGD+ +EI A Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVTVQGDKSAEEICEA 185 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N + D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+ Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ +D+RAPTP+ AAE+A P + + L N+++R++ + I+ L ++ Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N T+ +LD++ ++ +E + + I + + + + + Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFRIENNLKLEDEKLVKIGALLHNLSPLATMDR 356 Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + +++ + + + + I + + + + + L + + N + Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305 Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + K+ +I F + + +K + +L + + T+ RGY+ Q N Sbjct: 306 SYTIKDKVIQLDKIYDKIIFRIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 I + L K I I DG ++ Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIDKIE 397 >gi|301167915|emb|CBW27500.1| putative exodeoxyribonuclease VII large subunit [Bacteriovorax marinus SJ] Length = 429 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 121/485 (24%), Positives = 206/485 (42%), Gaps = 76/485 (15%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SVS L +K ++E V + GE++ + SSGH YF+L D S + A ++K + Sbjct: 8 SVSTLVGKVKGLLEGQFRSVSIEGEVTNL-SLSSSGHYYFTLSDKSSALSACLFKMDAMR 66 Query: 76 IE--FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLLTALEKRKKKLLEEGL 132 + G + IG I + +Q+I++ + + G LL E+ KKKL EGL Sbjct: 67 NPAIREIKNGDKVQCIGGIGVYAKRGSFQVIVKRITKTNVGGDLLAEFERLKKKLAGEGL 126 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191 F +KN IP +PK IAVIT+ GA ++D L R V++ P VQG+ I Sbjct: 127 FDLSNKNKIPTLPKKIAVITAQRGAALQDFLNITKRRTLWSNVMVVPALVQGEGAAASIR 186 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ D+I+L RGGGS+EDLW FNDE + I N IPIISA+GH+ Sbjct: 187 KALFNTIKYSLENKENAVDVIVLTRGGGSLEDLWAFNDEALAWDIFNCPIPIISAVGHQV 246 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D++++DY +DLR TP+ AA++ + + S L N++ L++ +I + + + Sbjct: 247 DFSISDYVSDLRCETPSAAAQILSEGQSQIISRLENIKKHLSSSGREIILARKDRV---- 302 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 E ++ + + R+ L + Sbjct: 303 -----------------------HSLRPEALMNKVMNLYQDYKFRLSRCSLEKREFELLG 339 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + E+ Q +++ +K+ + K++ Sbjct: 340 -LHEQWQRLDESLKRMNLALERTLKDR--------------------------------- 365 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN---LATKTRILIN 488 H++ + N L+RGY+ + D++ + + + L + + I Sbjct: 366 EHRVNKSFNMLGAL-------NPSNVLERGYSYMTDSSGHVVASSKEFSKLESGAELDIQ 418 Query: 489 FFDGQ 493 F DG+ Sbjct: 419 FSDGK 423 >gi|332526256|ref|ZP_08402385.1| exodeoxyribonuclease VII, large subunit [Rubrivivax benzoatilyticus JA2] gi|332110090|gb|EGJ10718.1| exodeoxyribonuclease VII, large subunit [Rubrivivax benzoatilyticus JA2] Length = 641 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 122/383 (31%), Positives = 202/383 (52%), Gaps = 12/383 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR---ID 65 + +SV+ L + + V VRGEISG+ +SGH YFSLKD+ + + Sbjct: 2 ASPRQVWSVAGLLLATADALSARFGAVAVRGEISGFT-RAASGHCYFSLKDHDGQPALLR 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ ++F P +G++ + G++ + + QI++ESL G+GTL + + Sbjct: 61 CAMFRRAAALLDFQPRDGLQVELRGRLGVYDARGELQIVVESLQRLGAGTLYEEFLRLRA 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 +L GLF K PIP P+++ V+TSP A +RD+L ++ R P + V+++P VQG Sbjct: 121 RLEAAGLFDAARKRPIPPHPRVLGVVTSPGAAALRDVLTALARRAPQVAVVVYPTPVQGG 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E P I A+ +E +++L RGGGS+EDLW FNDE +VRA+A S IP++ Sbjct: 181 EAPAAIVAALRTAADRRE------VQVLLLVRGGGSLEDLWAFNDERVVRAVAASPIPVV 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 +GHETD TLAD AADLRAPTPT AAE+A P + L +L + L + R + + Sbjct: 235 CGVGHETDVTLADLAADLRAPTPTAAAELAAPARVDLLVALASRSEALQRALRRQLDRQA 294 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L++ L ++ R RL L L+ L + ++ + + R+++ + Sbjct: 295 QRLDTAALRLGRPAAGVAQQRQRLAALELRLQQALAPQLSQRTQRAMALGLRLRAAT-VS 353 Query: 365 NIQKNRQHILEKQQHIEQIVKQH 387 + + R ++ +Q + + Sbjct: 354 RLDRLRSNLELGRQRLAALDPAR 376 Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 51/142 (35%), Gaps = 3/142 (2%) Query: 370 RQHILEKQQHIEQIVKQHLRYIF--LEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITR 426 R+ + + Q ++ + R ++++++A L + +Q ++ L R Sbjct: 287 RRQLDRQAQRLDTAALRLGRPAAGVAQQRQRLAALELRLQQALAPQLSQRTQRAMALGLR 346 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ +++ + + L + L+RGY ++ + + + L + Sbjct: 347 LRAATVSRLDRLRSNLELGRQRLAALDPARVLQRGYAWVETPSGRPVLRADGLRPGDELR 406 Query: 487 INFFDGQANAIVINKAPPKEQP 508 + DG A V Sbjct: 407 AVWADGAAAIRVFGVERKGSAS 428 >gi|255100218|ref|ZP_05329195.1| exodeoxyribonuclease VII large subunit [Clostridium difficile QCD-63q42] Length = 401 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%) Query: 17 VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +SE + ++K I+ + LS++ V+GEIS ++ HSSG+ Y SLKD S+++ +I+K N Sbjct: 8 ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + + G++ + G I+ + YQ+ I + G G L + K+KL +EGLF Sbjct: 67 R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++K PIP +P I VITSPTGAVIRDI+ I R+P + + ++PV VQGD+ +EI A Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVTVQGDKSAEEICEA 185 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N + D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+ Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ +D+RAPTP+ AAE+A P + + L N+++R++ + I+ L ++ Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N T+ +LD++ ++ +E + + I + + + + + Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDR 356 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + +++ + + + + I + + + + + L + + N + Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305 Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + K+ +I F + + +K + +L + + T+ RGY+ Q N Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 I + L K I I DG ++ Sbjct: 365 GKVINSIKGLKVKDSIDIVLKDGNLECMIDKIE 397 >gi|126698799|ref|YP_001087696.1| exodeoxyribonuclease VII large subunit [Clostridium difficile 630] gi|123363570|sp|Q18B66|EX7L_CLOD6 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|115250236|emb|CAJ68057.1| Exodeoxyribonuclease 7 large subunit [Clostridium difficile] Length = 401 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%) Query: 17 VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +SE + ++K I+ + LS++ V+GEIS ++ HSSG+ Y SLKD S+++ +I+K N Sbjct: 8 ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + + G++ + G I+ + YQ+ I + G G L + K+KL +EGLF Sbjct: 67 R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++K PIP +P I VITSPTGAVIRDI+ I R+P + + ++PV VQGD+ +EI A Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVTVQGDKSAEEICEA 185 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N + D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+ Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ +D+RAPTP+ AAE+A P + + L N+++R++ + I+ L ++ Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N T+ +LD++ ++ +E + + I + + + + + Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDR 356 Score = 81.7 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + +++ + + + + I + + + + + L + + N + Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305 Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + K+ +I F + + +K + +L + + T+ RGY+ Q N Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 I + L K I I DG ++ Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIDKIE 397 >gi|237752897|ref|ZP_04583377.1| exodeoxyribonuclease VII large subunit [Helicobacter winghamensis ATCC BAA-430] gi|229375164|gb|EEO25255.1| exodeoxyribonuclease VII large subunit [Helicobacter winghamensis ATCC BAA-430] Length = 414 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 121/367 (32%), Positives = 192/367 (52%), Gaps = 17/367 (4%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 S+++L+ +K ++E+ V V GE+S + H+SGH YF+LKD +S + ++++G Sbjct: 4 LSITDLNTQIKSLLEATFVQVRVSGEVSNFT-KHTSGHLYFTLKDKNSSLKCVMFRGNAA 62 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++F EG++ + G I+ + YQ+ IP G G LL A E+ K++ ++G F+ Sbjct: 63 KLKFQITEGMDLTLEGVISVYVPRGDYQLNCLDAIPKGIGALLLAYEQLKQEYEKKGYFT 122 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 Q IP PK +A++TS TGAV+ D+L R+ +R ++ VQGD + IA Sbjct: 123 KQKP--IPRFPKKVALLTSSTGAVLHDMLSIAKKRWNLVRFVLLDTLVQGDGAKESIAAN 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + +TL D IILARGGGS+EDLW FN+ M+ AI S+ PIISAIGHE D Sbjct: 181 LKIADTL-------GADCIILARGGGSLEDLWAFNEPMVAEAIYQSNTPIISAIGHEPDV 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D+ ADLRAPTP+ A E+ +P ++ L L+ L +++R ++ K N L + + Sbjct: 234 VLSDFVADLRAPTPSAAMELLLPDEKEWLMRLDALQIDLEKLLMRALQAKSNALKAFKEK 293 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + EI +K H + + K Q + Sbjct: 294 LNY------NPFFMKITQFQAQCQQQEIFFTQKMEHKLALSSFKLQVPQTQVHLKMEQKL 347 Query: 374 LEKQQHI 380 + Q + Sbjct: 348 AQLQAKL 354 >gi|254974738|ref|ZP_05271210.1| exodeoxyribonuclease VII large subunit [Clostridium difficile QCD-66c26] gi|255092127|ref|ZP_05321605.1| exodeoxyribonuclease VII large subunit [Clostridium difficile CIP 107932] gi|255313864|ref|ZP_05355447.1| exodeoxyribonuclease VII large subunit [Clostridium difficile QCD-76w55] gi|255516545|ref|ZP_05384221.1| exodeoxyribonuclease VII large subunit [Clostridium difficile QCD-97b34] gi|255649645|ref|ZP_05396547.1| exodeoxyribonuclease VII large subunit [Clostridium difficile QCD-37x79] gi|260682809|ref|YP_003214094.1| exodeoxyribonuclease VII large subunit [Clostridium difficile CD196] gi|260686407|ref|YP_003217540.1| exodeoxyribonuclease VII large subunit [Clostridium difficile R20291] gi|306519762|ref|ZP_07406109.1| exodeoxyribonuclease VII large subunit [Clostridium difficile QCD-32g58] gi|260208972|emb|CBA62022.1| exodeoxyribonuclease VII large subunit [Clostridium difficile CD196] gi|260212423|emb|CBE03288.1| exodeoxyribonuclease VII large subunit [Clostridium difficile R20291] Length = 401 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 127/357 (35%), Positives = 207/357 (57%), Gaps = 13/357 (3%) Query: 17 VSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 +SE + ++K I+ + LS++ V+GEIS ++ HSSG+ Y SLKD S+++ +I+K N Sbjct: 8 ISEANSYIKRILINDPILSNLKVKGEISNFKV-HSSGNVYLSLKDETSKLNCVIFKSNFN 66 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + + G++ + G I+ + YQ+ I + G G L + K+KL +EGLF Sbjct: 67 R-NLKLDNGVKIIANGYISVYERDGAYQLYINEIEIEGIGNLHIEFNRLKEKLNKEGLFD 125 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 ++K PIP +P I VITSPTGAVIRDI+ I R+P + + ++PV VQGD+ +EI A Sbjct: 126 PKYKIPIPKMPNSIGVITSPTGAVIRDIINVIKRRYPKVNIKLYPVMVQGDKSAEEICEA 185 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I N + D +I+ RGGGSIE+LW FNDEM+ R + NS IPIISA+GHETD+ Sbjct: 186 IRFFNHM------KNVDTLIVGRGGGSIEELWSFNDEMVAREVFNSQIPIISAVGHETDF 239 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ D+ +D+RAPTP+ AAE+A P + + L N+++R++ + I+ L ++ Sbjct: 240 TICDFVSDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNK 299 Query: 314 LPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N T+ +LD++ ++ +E + + I + + + + + Sbjct: 300 INNYLDSYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDR 356 Score = 81.7 bits (200), Expect = 2e-13, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 6/153 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + +++ + + + + I + + + + + L + + N + Sbjct: 246 SDMRAPTPSAAAEIATPSLDDINYKLGNIKSRMSKSLTNQIELDQYRLETVFNKINNYLD 305 Query: 415 YLHTH-----IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + K+ +I F + + +K + +L + + T+ RGY+ Q N Sbjct: 306 SYTIKDKVIQLDKIYDKIIFGIENNLKLEDEKLVKIGALLHNLSPLATMDRGYSITQ-KN 364 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 I + L K I I DG ++ Sbjct: 365 GKVINSIKGLKIKDSIDIVLKDGNLECMIDKIE 397 >gi|256827064|ref|YP_003151023.1| exodeoxyribonuclease VII, large subunit [Cryptobacterium curtum DSM 15641] gi|256583207|gb|ACU94341.1| exodeoxyribonuclease VII, large subunit [Cryptobacterium curtum DSM 15641] Length = 456 Score = 265 bits (676), Expect = 2e-68, Method: Composition-based stats. Identities = 109/502 (21%), Positives = 188/502 (37%), Gaps = 56/502 (11%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 ++ + SVS+ K+ +ES V + GE+S AYF++KD + + Sbjct: 2 SSATESTPLSVSQAMALAKNTLESC--TVTLVGEVSEVSVKPGYKAAYFTVKDTAASMPC 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++W G + G+ T + + + SL +G G L + ++ Sbjct: 60 MMWMNRFRSEGIDLRVGQLVQLTGRFTVYAPKGRMNFDVFSLSAAGEGDLRQRVADLARR 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L EGL K +P +P+ I ++TSP GA + D+L+ + R+PL +++ V V+G Sbjct: 120 LSAEGLMEASRKRALPGMPRTIGLVTSPHGAAVHDVLRTLRRRWPLSNILLAGVMVEGVN 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P EI + + +L RGGGS EDL FNDE + R IA +P+++ Sbjct: 180 APAEIVEGLRVVVEAGAEVV-------LLVRGGGSFEDLMPFNDERLARTIARCPVPVVT 232 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D ++AD AD RA TPT AAE VP + L +L Sbjct: 233 GIGHEPDTSIADMVADRRASTPTAAAEACVPDQRELALTLD------------------- 273 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S + + L+ RLD L + + Sbjct: 274 --ASADRLQAQATVRLADFTRRLDALASRPVLS----------------------DPLQA 309 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + RQ I + + + L L + ++ + Sbjct: 310 IARFRQPIDLVSGRLTRAIPGALAADSAALAAHHMRLRAIGSSL---TSMRVENLTSSQS 366 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + + L + + + RG+ ++D + ++ T++ Sbjct: 367 RLSTAGRSLQTRFDEAWQMRAARLGDLSPLSVIGRGFALVRDDTGALVHSIDTVSPGTKV 426 Query: 486 LINFFDGQANAIVINKAPPKEQ 507 I DG +A V ++ Sbjct: 427 SIAVADGTIDAQVTATTHDEKT 448 >gi|269119850|ref|YP_003308027.1| exodeoxyribonuclease VII large subunit [Sebaldella termitidis ATCC 33386] gi|268613728|gb|ACZ08096.1| exodeoxyribonuclease VII, large subunit [Sebaldella termitidis ATCC 33386] Length = 446 Score = 264 bits (675), Expect = 2e-68, Method: Composition-based stats. Identities = 127/493 (25%), Positives = 223/493 (45%), Gaps = 52/493 (10%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ ++VSEL+ +K +E ++ ++GEIS + SGH YF+LKDN S + Sbjct: 1 MEAGIFTVSELNRAVKEYLEGTRAFKNIYIQGEISNIT-YYKSGHLYFTLKDNKSSVKCA 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126 +++ + + +EG + ++G T + +Q+I E L G L EK KK Sbjct: 60 VFRYMIKGVPRDLKEGDQVKLLGSATLYEQGGSFQVIGEHLEKQNKLGELYEKFEKLKKY 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDE 185 E G F+++ K +P +P I V+T+ TGA IRDI+ RF + + ++P +VQG+ Sbjct: 120 YFELGYFNEEIKKKLPKVPLNIGVVTAETGAAIRDIINTAHKRFRNVNIYLYPSRVQGEG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E+A I N + R D II+ RGGGSIEDLW FN+E ++ A+ S +P+IS Sbjct: 180 AAYEVARGIEIFN-RENVRERLDLDFIIIGRGGGSIEDLWAFNEEPVIEAVYKSDLPVIS 238 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D L+D AD+RA TPT A E++VP+K Sbjct: 239 AVGHEIDNLLSDLTADIRAATPTQAIEISVPLKSD------------------------- 273 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + YR + L +L I + + ++ Sbjct: 274 --------------LIQELEYRKNLL----NKHLMNEIALMKNNLEKRKSNYIIRNFLNI 315 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + +++K+ + + +K + + +L ++ +++I + + Sbjct: 316 LIEKKMMMIDKENRLNKSLKYKIAASSEKLTMTKKLLSKIKL--EDKIKEKKEELTDMER 373 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + +++ KIK ++ + + LK+GYT + I +K +L I Sbjct: 374 ILTKLITEKIKEYKNNLEYKKAVAAKYNSGEILKQGYTLTKYK-GKLIVKKESLKKDDEI 432 Query: 486 LINFFDGQANAIV 498 F DG+ +IV Sbjct: 433 TTVFSDGEIKSIV 445 >gi|291087521|ref|ZP_06346683.2| exodeoxyribonuclease VII, large subunit [Clostridium sp. M62/1] gi|291074899|gb|EFE12263.1| exodeoxyribonuclease VII, large subunit [Clostridium sp. M62/1] Length = 392 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 118/383 (30%), Positives = 193/383 (50%), Gaps = 11/383 (2%) Query: 31 NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90 LS + ++GE+S + H+SGH YF+LKD + I A+++ ++F +G + +V G Sbjct: 7 ALSRISIKGEVSNCK-YHTSGHIYFTLKDGLAAIQAVMFASRRGGLDFELRDGQQVVVKG 65 Query: 91 KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150 + + +YQ+ + G+G L EK + +L E G+F+ ++K PIP + + V Sbjct: 66 SVEVYERDGRYQLYASQIALDGAGDLFRRFEKLRNELEEMGMFAPEYKRPIPKFARTVGV 125 Query: 151 ITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209 +T+ TGA IRDI+ S R P ++++++P +VQG+ + IA I L+ + Sbjct: 126 VTASTGAAIRDIINISSRRNPYVQLVLYPARVQGEGAAESIARGIEVLDRM-------GL 178 Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 D+II RGGGSIEDLW FN+E++ RAI S P+ISA+GHETD T+ADY ADLRAPTP+ Sbjct: 179 DVIIAGRGGGSIEDLWAFNEEIVARAIFRCSTPVISAVGHETDVTIADYVADLRAPTPSA 238 Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYR 327 AAE+AV ++ L + L + R I L + + ++ R R Sbjct: 239 AAELAVFDFGQFEAQLRGAKELLARGLKRKIDGVRYQTEQYRLKLRLHDPQRQINEKRQR 298 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L EL+ +E + + R+ + + + I +++ Sbjct: 299 LVSAEDELKRLMERRLSDCRHRLALMSGRLHGQSPLEKLSRGFGFITDEEGRRVDHAASV 358 Query: 388 LRYIFLEKKEKIAILHMLREQTK 410 L + + EQT+ Sbjct: 359 RPGDRLSIRLADGQIEARAEQTE 381 Score = 98.3 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 48/159 (30%), Gaps = 5/159 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL-----EKKEK 398 + +++ + + + + + R + + + Sbjct: 218 HETDVTIADYVADLRAPTPSAAAELAVFDFGQFEAQLRGAKELLARGLKRKIDGVRYQTE 277 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L + + +I + ++ ++ ++ C +++ + L + L Sbjct: 278 QYRLKLRLHDPQRQINEKRQRLVSAEDELKRLMERRLSDCRHRLALMSGRLHGQSPLEKL 337 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 RG+ I D + ++ R+ I DGQ A Sbjct: 338 SRGFGFITDEEGRRVDHAASVRPGDRLSIRLADGQIEAR 376 >gi|159901240|ref|YP_001547487.1| exodeoxyribonuclease VII large subunit [Herpetosiphon aurantiacus ATCC 23779] gi|159894279|gb|ABX07359.1| exodeoxyribonuclease VII, large subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 392 Score = 263 bits (673), Expect = 4e-68, Method: Composition-based stats. Identities = 120/393 (30%), Positives = 206/393 (52%), Gaps = 17/393 (4%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVSEL ++ ++ + +S V V GE+S + HSSGH Y +LK+ +RIDA+IW+ T Sbjct: 4 LSVSELCGYINAVLTSDPVVSDVWVYGEVSNCK-RHSSGHWYLTLKEADARIDAVIWRST 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ +LP++G+ L GK+ + + + QI ++ + P+G G L E+ K +L EGL Sbjct: 63 ALRLSYLPQDGMAILGHGKVELY--NGRLQIYLDFITPAGEGLLQAQYERLKAQLEAEGL 120 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 + K P+P P+ I ++TSPTGA ++D+L + RFPL VII P VQG++ I Sbjct: 121 --TERKRPLPLFPQRIGIVTSPTGAALQDMLNVLRRRFPLAEVIIAPALVQGEDAAPSIV 178 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ +L PD+II+ARGGGSIEDLW FN+E++ RA+ S +P+++ +GHET Sbjct: 179 EALYELFDF-------EPDVIIVARGGGSIEDLWAFNEEIVARAVFASPVPVVTGVGHET 231 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNS 309 D T+ D+ ADLRAPTP+ AAE+ P L+ LI+ L+ + ++ + Sbjct: 232 DTTIVDFVADLRAPTPSAAAELVTPDLVTLRDELISHVGLLHGLFQGRLQLLRSELGQQQ 291 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 N L + +++ ++L+ ++ ++ + + + + Sbjct: 292 QQLLRHNPQMRLHQAHEQVNAQQQQLQRTIQRMLEMARLKVQVAERSLVALNPERTLARG 351 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 +L + + + + + + Sbjct: 352 YAVVLHNDRSLTNTSHVAVGDTINIQLHQGQLQ 384 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 1/115 (0%) Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 R L + +LR + R+ H + +++ + ++ V + Sbjct: 276 FQGRLQLLRSELGQQQQQLLRHNPQMRLHQAHEQVNAQQQQLQRTIQRMLEMARLKVQVA 335 Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 R L + + TL RGY + N+ +T ++A I I GQ A + Sbjct: 336 ERSLVALNPERTLARGYAVVLH-NDRSLTNTSHVAVGDTINIQLHQGQLQATITE 389 >gi|222444758|ref|ZP_03607273.1| hypothetical protein METSMIALI_00371 [Methanobrevibacter smithii DSM 2375] gi|222434323|gb|EEE41488.1| hypothetical protein METSMIALI_00371 [Methanobrevibacter smithii DSM 2375] Length = 527 Score = 263 bits (672), Expect = 5e-68, Method: Composition-based stats. Identities = 134/515 (26%), Positives = 226/515 (43%), Gaps = 59/515 (11%) Query: 11 DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++ YS+S ++ + + + + +RGEI+ + G ++SGH YFSLKD +S I ++ Sbjct: 3 ENDIYSISAINNLIDKKISYCDDFKKIKIRGEITNFNGSYNSGHYYFSLKDKNSSISCVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +K + ++F P+ G++ + G+++ + Q + + +G G L A EK KKKL Sbjct: 63 FKLSTKSLDFEPKNGVDVVASGEVSFYKVRGNLQFRVRKMQEAGLGDLYIAFEKLKKKLD 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF D+ IP PK I VITS +G ++DI+ I R+P +I++ VQG + Sbjct: 123 KEGLFKDKKA--IPHYPKKIGVITSASGKAVKDIVNNIEKRWPAEIIVWNTTVQGANSTR 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I N D+II+ RGGGS +DLW FN E IVR+IANS P+I+AIG Sbjct: 181 SITKNIALANK-------TDVDVIIVGRGGGSTQDLWDFNKEEIVRSIANSKKPVITAIG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306 H TD TL+D A+D A TPT AAE+ VP K L L N+E RLN++I + Sbjct: 234 HSTDKTLSDMASDKAAATPTKAAELVVPNKVELNEKLKNIETRLNDLINSKLDNLTHKLN 293 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 ++ K L + + L L E +L +I ++ N + + + Sbjct: 294 ISKNNKTLKDPLSKYKNHQTNLVLLKTTAEKSLNQLIQSNELQLDNFNNSYILNNPDYIL 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL------------------------ 402 K I + ++ + L + L Sbjct: 354 NKKVGKITLFKNELDNNISNCLLEYENKLNLHFKNLKSMNFIESFELKKNSLNLIENNLN 413 Query: 403 -------------------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + + + + ++ ++ ++ + S + Sbjct: 414 NSINVTLNSHIHDLEIIKNNHVFSNPCQVLDDKFVKMAQIHKSLDAEITKTLDSNENKLR 473 Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 I L+ L++GY ++D + I + + Sbjct: 474 ILEEKLKILNPDELLEKGY-VVKDPDE--IRKSKA 505 >gi|304440278|ref|ZP_07400168.1| exodeoxyribonuclease VII large subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371327|gb|EFM24943.1| exodeoxyribonuclease VII large subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 503 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 144/518 (27%), Positives = 239/518 (46%), Gaps = 42/518 (8%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 VSEL+ ++ ++ + + + V GE+S Y HSSG+ +FSLKD++S+ID + Sbjct: 3 VLKVSELTNYISKYLKLDYFINDLSVEGEVSNYN-KHSSGNLFFSLKDDNSKIDCFMSVV 61 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + IE PEEG ++ G +T +SK +++S SG G+LL K+KL +EG Sbjct: 62 DTSDIELFPEEGDRLIITGAVTLSEKTSKIIFVVKSFELSGEGSLLRKFTLLKEKLDKEG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190 LF HK IP P I V+TSPTGA I DIL + R + +II+P VQG+ + I Sbjct: 122 LFDSIHKKQIPKFPNRIGVVTSPTGAAITDILNVMKRRNKNIDIIIYPSLVQGEGAAETI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + L+ + + D IILARGGGS EDL+ FNDE I R I S PIISA+GHE Sbjct: 182 IEGLQTLDKM-------KLDCIILARGGGSKEDLFVFNDENIARTIFKLSTPIISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D++++DY ADLRAPTP+ AAE+ + ++ +L+ R++ I + + L L Sbjct: 235 IDFSISDYVADLRAPTPSAAAELVSCKLSDMIENIFDLKKRMDVSISNKLMIRDTKLQRL 294 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFR--------------------KYR 348 L + ++ ++++L + + + I Sbjct: 295 RYGLNSHSPVLLINENKHKLSLYRDRITWSTKERITSNRLEVVKLKNFKDRLIAENINRH 354 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 N R S L +N+ + ++ + +++ L +K K + Sbjct: 355 KINLKNYRFISASLQNNLYYKKTRLIYNKNRLDK--HILLEISKAYQKNKALYNEISLRD 412 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 +I +L I + ++I+ + K+++ ++I L KN + Sbjct: 413 LYFKIKHLRIDINSIESKIKSNIDSKLQNNLLKLNILKSKLDMEHRKN-----FGI--YK 465 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 + I ++ + I DG N V + ++ Sbjct: 466 DGKLIKSVNDVEVGSTIKSLLEDGILNLEVTSIEKVRK 503 >gi|229825478|ref|ZP_04451547.1| hypothetical protein GCWU000182_00838 [Abiotrophia defectiva ATCC 49176] gi|229790041|gb|EEP26155.1| hypothetical protein GCWU000182_00838 [Abiotrophia defectiva ATCC 49176] Length = 426 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 122/499 (24%), Positives = 203/499 (40%), Gaps = 80/499 (16%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +SV E++ ++K +E + + +V + GE+S + GH YF++KD+ + + Sbjct: 2 AEKKIFSVLEITRYIKSRLEGDFALRNVRISGEVSDCKED-KKGHLYFTIKDDGAVMGCA 60 Query: 68 IW-KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +W ++ ++F E G +V G I + Y++ + + G G L LEK K+K Sbjct: 61 MWSAKRISGLDFKLETGQHIVVTGNIGVYEKWGDYKLYADKIEKEGVGKLFEELEKLKQK 120 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF + HK PIP PK I +ITS TGAVI DI + ++++++P VQG E Sbjct: 121 LKAEGLFDEAHKKPIPKYPKKIGIITSRTGAVIEDIKRTAREANAYVQLLLYPATVQGAE 180 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 + I + D II+ RGGGSIEDLW FNDE + RA+ N SIPIIS Sbjct: 181 AAATLIKGIKRF-------EKEGVDTIIIGRGGGSIEDLWCFNDERLARAVYNCSIPIIS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GH+TD TL D +DL TPT AA AVP Sbjct: 234 AVGHQTDRTLVDEVSDLSVATPTAAAMNAVP----------------------------- 264 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + LD + + ++ I R + I+ Sbjct: 265 --------------KLELAFGELDAYKDSIANKFQLKIDRMKAWLDKTDFSIRRQSPEMK 310 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ + + + + ++ + Sbjct: 311 LKEVGRQLDNYSANFNR-------------------------NIAAKLDNYDRLLLNNKQ 345 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +E ++ +S + T ++ + L GY+ +++ + + + T R+ Sbjct: 346 MLERLMRASYESVNKRFISLTAEIEGKSPMKRLLGGYSYVENEAGENVRSIKAVKTGERL 405 Query: 486 LINFFDGQANAIVINKAPP 504 + DG A V Sbjct: 406 NLVLSDGSLKARVEEINKK 424 >gi|152993545|ref|YP_001359266.1| exodeoxyribonuclease VII large subunit [Sulfurovum sp. NBC37-1] gi|151425406|dbj|BAF72909.1| exodeoxyribonuclease VII, large subunit [Sulfurovum sp. NBC37-1] Length = 422 Score = 263 bits (671), Expect = 6e-68, Method: Composition-based stats. Identities = 112/369 (30%), Positives = 190/369 (51%), Gaps = 12/369 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VS L+ +K ++E+ H+ V GE++ HSSGH YFS+KD+ S I ++W+ ++ + Sbjct: 6 TVSSLNTKIKSLLEATFMHILVEGEVASVT-YHSSGHLYFSIKDDKSAIKCVMWRSSVAR 64 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++F E+G+ +V G ++ + +YQ + P G G L A E+ K++L +G F Sbjct: 65 MKFRIEKGMHIVVEGSVSVYTPRGEYQFQTVRIEPYGKGALALAYEQLKERLKAKGYFDA 124 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 K PIP + IA++T+ A + D+L+ I R+P L V I VQG+ +IA+A+ Sbjct: 125 HRKKPIPKSIRKIALVTARESAALYDMLKIIEKRWPLLEVTIVDTLVQGESAAGQIAHAL 184 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 +TL D++++ RGGGS EDLW FN+E++ AI P++SA+GHE D Sbjct: 185 RYADTL-------EADVVVVGRGGGSTEDLWCFNEELVADAIFAMQTPVVSAVGHEVDVM 237 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D ADLRAPTP+ A EM +P + + +L E R I + L + + L Sbjct: 238 ISDLVADLRAPTPSAAMEMILPDLQEILYTLSEYEERFKQAITSRLTQSTRELKHVKEML 297 Query: 315 PN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + L S+ R+ E + + + R + + + +Q+ QH Sbjct: 298 HRSSPLRRLEESKMEFKRMEEEFKRMISYRMERFESVLPSMRDA-YVQTMQFTLQRKEQH 356 Query: 373 ILEKQQHIE 381 + + + Sbjct: 357 LDHLMKKLR 365 >gi|298245122|ref|ZP_06968928.1| exodeoxyribonuclease VII, large subunit [Ktedonobacter racemifer DSM 44963] gi|297552603|gb|EFH86468.1| exodeoxyribonuclease VII, large subunit [Ktedonobacter racemifer DSM 44963] Length = 411 Score = 263 bits (671), Expect = 7e-68, Method: Composition-based stats. Identities = 127/359 (35%), Positives = 204/359 (56%), Gaps = 13/359 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK-GT 72 SVS LS L+ +E+N L V V GE+S + SGH YF+LKD+ ++++ + +K Sbjct: 14 SVSALSVFLREWLETNDMLQDVRVYGEVSNCKTYP-SGHCYFTLKDSGAQLNCVFFKQSR 72 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 L +G+ + G+I+ + K Q+ +ES P G G L LE+ K +L EGL Sbjct: 73 LRSSAPTLRDGMGIALNGRISFYERDGKLQLYVESAEPLGVGALFERLERLKARLEAEGL 132 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F+++ K +P P++I ++TSP A +RD+L+ + R+PL RVI+ P +VQG + P IA Sbjct: 133 FAEERKRVLPERPEVIGIVTSPQAAALRDMLRVLRQRYPLARVILAPAQVQGSDAPASIA 192 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ LN E ++II RGGGSIE+LW FN+E++VRAIA SSIP+IS +GHET Sbjct: 193 AALDALNEHGEA------EVIIAGRGGGSIEELWAFNEEVVVRAIARSSIPVISGVGHET 246 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+TLAD+ ADLRA TPT AA AVP E + L++ + L +++ ++ + L Sbjct: 247 DFTLADFVADLRASTPTAAATAAVPNIEDWRIELLDRQQELGSLMEERLEELAAQVADLQ 306 Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + ++ R +LD ++ ++ ++ + + ++ + + I + Sbjct: 307 YQLEHRSPVGQINNYRQQLDEASERMQTHMRHLLSIRAERLSGQTLQLHALSPLLTIAR 365 Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 3/138 (2%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 NI+ R +L++QQ + ++++ R L + + +I + + Sbjct: 272 NIEDWRIELLDRQQELGSLMEE--RLEELAAQVADLQYQLEHRSPVGQINNYRQQLDEAS 329 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT-NNNFITQKRNLATKT 483 R++ + H + +S T L + + T+ RGY ++ + IT + + Sbjct: 330 ERMQTHMRHLLSIRAERLSGQTLQLHALSPLLTIARGYAVVRHEPDQRLITSVKQVQAGD 389 Query: 484 RILINFFDGQANAIVINK 501 + I DG V + Sbjct: 390 ALSIQVQDGSIPVTVREE 407 >gi|331000993|ref|ZP_08324629.1| exodeoxyribonuclease VII, large subunit [Parasutterella excrementihominis YIT 11859] gi|329569768|gb|EGG51532.1| exodeoxyribonuclease VII, large subunit [Parasutterella excrementihominis YIT 11859] Length = 577 Score = 263 bits (671), Expect = 7e-68, Method: Composition-based stats. Identities = 122/447 (27%), Positives = 194/447 (43%), Gaps = 18/447 (4%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + +SV++ + E V V GEIS SSGH YFS+KD + + ++ Sbjct: 1 MTDKAFSVTQFVDIVNLSFEQ-FESVAVEGEIST-STKASSGHWYFSIKDEEAVLSCAMF 58 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G L + + + G + V GK +PGS K I + +G G L + K +L Sbjct: 59 RGKLYSVRGVFKVGDKVRVTGKPNLYPGSGKLTFICSKIEAAGEGKLYELFLRLKNELTA 118 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F K IP +P+ I +ITS TGA ++D++ R+ R P +RV+++ VQG Sbjct: 119 LGWFDQSRKKAIPRVPRTIGIITSRTGAALQDVMNRLRARAPYVRVLLYHTAVQGKGAEA 178 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N + D+++L RGGGS+EDLW FN++++ AI NS IPIIS IG Sbjct: 179 EIAQRINKANQ------DNKADVLLLVRGGGSLEDLWCFNEKIVAEAIVNSHIPIISGIG 232 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+AAD RAPTPTGAAE A + L + + L+ + + Sbjct: 233 HETDTTIADFAADFRAPTPTGAAEAAAEKQSVLFWEIDSAWVLLHRSFENQFNRALQDVE 292 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFNHIINRIKSDFLIHN 365 + + N L R+RL + L + + S L Sbjct: 293 NESRPFENPQAFLETFRHRLSAVSHLQRPVLSYYRQNLNSLKSRLQLDMQNFLSSSLERE 352 Query: 366 IQKNR------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 R + I ++ ++ + I + + Sbjct: 353 KFAARYFISPSRFIEPYEKRLQAASPILRLDTAAMRSRIDLIFSSINTAQSACLRMNRAE 412 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITT 446 + ++ + KI+S ++ + Sbjct: 413 LGVAEENLQAEMDVKIRSAGDALRLAA 439 >gi|258544964|ref|ZP_05705198.1| exodeoxyribonuclease VII, large subunit [Cardiobacterium hominis ATCC 15826] gi|258519767|gb|EEV88626.1| exodeoxyribonuclease VII, large subunit [Cardiobacterium hominis ATCC 15826] Length = 400 Score = 262 bits (670), Expect = 9e-68, Method: Composition-based stats. Identities = 122/360 (33%), Positives = 190/360 (52%), Gaps = 13/360 (3%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 Y+VS+L+ ++ +ES+ + V GEIS +SGH YF+LKD+ +++ ++KG Sbjct: 4 YTVSQLNARIRAQLESDYRDIWVEGEISNL-SRPASGHLYFTLKDDAAQVACALFKGNSY 62 Query: 75 KIEF---LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++ G+ V G+ T + YQ++++ + +G G L L++R+ L EG Sbjct: 63 RLSLPARELANGLAVRVHGRATLYEPRGNYQLVLDQIEAAGIGALEAELKRRRDMLAAEG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEI 190 F K PIP P+ I +ITS +GA I D L + R PL VII+P VQG++ P ++ Sbjct: 123 CFDAARKRPIPPAPRQIGIITSASGAAIHDALTTLRRRNPLVGVIIYPSLVQGEQAPAQL 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I N E D ++L RGGGS+EDLW +ND ++RAIA S+IPIIS +GHE Sbjct: 183 IRQIETANRRGE------CDTLLLIRGGGSLEDLWAYNDPNLIRAIAASAIPIISGVGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TLAD AADLRAPTPT AA + P L L+ +L+ R ++ +L Sbjct: 237 TDVTLADLAADLRAPTPTAAAAHSCPDLGSSFQHLARLKEQLHGATRRRLQNAQQRQQTL 296 Query: 311 LKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L N + + ++ R D+L L R+ + ++ + ++ +Q+ Sbjct: 297 AHRLHQQNPQRQIRTAQQRADQLGERLHAAAHRRWQREQTRLSALMQHLHHLSPLNVLQR 356 Score = 109 bits (271), Expect = 2e-21, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 54/160 (33%), Gaps = 5/160 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL-----RYIFLEKKEK 398 + +++ + + QH+ ++ +Q R +++++ Sbjct: 235 HETDVTLADLAADLRAPTPTAAAAHSCPDLGSSFQHLARLKEQLHGATRRRLQNAQQRQQ 294 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + ++ + +I +L R+ + + T +S + L + N L Sbjct: 295 TLAHRLHQQNPQRQIRTAQQRADQLGERLHAAAHRRWQREQTRLSALMQHLHHLSPLNVL 354 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 +RGY + + + + +I + G+ + V Sbjct: 355 QRGYALAYNAEGKTLARSDAVQPGDKISVRLASGRLHCTV 394 >gi|303257723|ref|ZP_07343735.1| exodeoxyribonuclease VII, large subunit [Burkholderiales bacterium 1_1_47] gi|302859693|gb|EFL82772.1| exodeoxyribonuclease VII, large subunit [Burkholderiales bacterium 1_1_47] Length = 577 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 121/447 (27%), Positives = 193/447 (43%), Gaps = 18/447 (4%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 + +SV++ + E V V GEIS SSGH YFS+KD + + ++ Sbjct: 1 MTDKAFSVTQFVDIVNLSFEQ-FESVAVEGEIST-STKASSGHWYFSIKDEEAVLSCAMF 58 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +G L + + + G + V GK +PGS K I + +G G L + K +L Sbjct: 59 RGKLYSVRGVFKVGDKVRVTGKPNLYPGSGKLTFICSKIEAAGEGKLYELFLRLKNELTA 118 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F K IP +P+ I +ITS TGA ++D++ R+ R P +RV+++ VQG Sbjct: 119 LGWFDQSRKKAIPRVPRTIGIITSRTGAALQDVMNRLRARAPYVRVLLYHTAVQGKGAEA 178 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N + D+++L RGGGS+EDLW FN++++ AI NS IPIIS IG Sbjct: 179 EIAQRINKANQ------DNKADVLLLVRGGGSLEDLWCFNEKIVAEAIVNSHIPIISGIG 232 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+AD+AAD RAPTPTGAAE A + L + + L+ + + Sbjct: 233 HETDTTIADFAADFRAPTPTGAAEAAAEKQSVLFWEIDSAWVLLHRSFENQFNRALQDVE 292 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFNHIINRIKSDFLIHN 365 + + N L R+ L + L + + S L Sbjct: 293 NESRPFENPQAFLETFRHHLSAVSHLQRPVLGYYRQNLNSLKSRLQLDMQNFLSSSLERE 352 Query: 366 IQKNR------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 R + I ++ ++ + I + + Sbjct: 353 KFAARYFISPSRFIEPYEKRLQAASPILRLDTAAMRSRIDLIFSSINTAQSACLRMNRAE 412 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITT 446 + ++ + KI+S ++ + Sbjct: 413 LGVAEENLQAEMDVKIRSAGDALRLAA 439 >gi|118474545|ref|YP_891459.1| exodeoxyribonuclease VII large subunit [Campylobacter fetus subsp. fetus 82-40] gi|158512502|sp|A0RMM6|EX7L_CAMFF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|118413771|gb|ABK82191.1| exodeoxyribonuclease VII, large subunit [Campylobacter fetus subsp. fetus 82-40] Length = 387 Score = 261 bits (668), Expect = 2e-67, Method: Composition-based stats. Identities = 121/338 (35%), Positives = 184/338 (54%), Gaps = 11/338 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VSEL+ K ++E++ S V V GEIS HSSGH YFSLKD S I + ++K + + Sbjct: 2 TVSELNEQAKALLETHFSFVEVTGEISRL-IRHSSGHWYFSLKDEKSVISSAMYKFSNQQ 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++F ++G++ + GK+T +P S YQ++ ++P G G L A + K KL EGLF Sbjct: 61 VKFEVKDGMQVTIYGKLTIYPPSGSYQLLANKMLPVGIGELELAFNQLKSKLENEGLFDI 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAI 194 + K P+P PK IA++TS T A +D+L+ I+ R+ L I F VQG+ I + Sbjct: 121 KFKKPLPKFPKKIAIVTSLTSAAYQDMLKVINSRYKLCEFIAFNTLVQGEMAAANIIQML 180 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + + + D I+LARGGGS EDLW FNDE + R I PI+SA+GHE D+ Sbjct: 181 QKADKM-------GFDAIVLARGGGSKEDLWCFNDENLARVIFTLKTPIVSAVGHEIDYC 233 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D+ +D R+ TPT A +P + SL + + I + N LN + ++L Sbjct: 234 ISDFVSDHRSLTPTAAMVDLLPDANTILQSLDIAFDKFESFIDGKFQNSFNILNLINQSL 293 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 N Q +S + + + NLE +I K + H Sbjct: 294 KN--QAISQKIEKANLTLENKKANLENLITSKINNLAH 329 >gi|289423082|ref|ZP_06424897.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus anaerobius 653-L] gi|289156413|gb|EFD05063.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus anaerobius 653-L] Length = 399 Score = 261 bits (667), Expect = 2e-67, Method: Composition-based stats. Identities = 126/360 (35%), Positives = 198/360 (55%), Gaps = 13/360 (3%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 VSEL+ ++K ++ E L +V V+GE+S ++ IHSSG+ Y SLKD S+++ II + Sbjct: 5 PLEVSELNSYIKKLIADEPILGNVMVKGEVSNFK-IHSSGNVYLSLKDKDSKVNCIILRR 63 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + + ++G + + G + + YQ+ I S+ G G L + K++L +EG Sbjct: 64 NFAQ-DMVIKDGTKIIASGSVRVYERDGAYQLYINSVEVEGMGNLYYQYLQMKERLEKEG 122 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LFS HK IP PK+I VITSPTGAVIRDI+ +S R+P + + +FPV VQG+ + + Sbjct: 123 LFSPMHKKKIPRFPKVIGVITSPTGAVIRDIINVVSRRYPRVEIKLFPVLVQGERSEESL 182 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ N D II+ RGGGS+E+LW FN E + R I +S IPIISA+GHE Sbjct: 183 IRALDFFNRR------DDIDTIIIGRGGGSLEELWSFNSEALARKIFDSKIPIISAVGHE 236 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LN 308 TD+T+ D+ ADLRAPTP+ AAE+A P + L +S L R++ + I+ + + Sbjct: 237 TDYTICDFVADLRAPTPSSAAELATPDLKDLLASQDILVKRMSRAVSNKIEIERQKVSRS 296 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + S RLDR+ + +++ + + I + + + + Sbjct: 297 IEKTHTIVQKDMIDMSYVRLDRMQERMAASVDRRMVDYKNKLSLIGVSMGNLNPFSVMDR 356 Score = 74.4 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 51/133 (38%), Gaps = 3/133 (2%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIE 428 + +L Q + + + + + +++K++ K+ I + + ++ R+ Sbjct: 265 KDLLASQDILVKRMSRAVSNKIEIERQKVSRSIEKTHTIVQKDMIDMSYVRLDRMQERMA 324 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + ++ +S+ + + + + RGY+ ++ + + + ++ I I Sbjct: 325 ASVDRRMVDYKNKLSLIGVSMGNLNPFSVMDRGYSVVESSGG-LVQKTTDVELGEDIDIL 383 Query: 489 FFDGQANAIVINK 501 DG V K Sbjct: 384 LSDGSLRCQVKEK 396 >gi|302670344|ref|YP_003830304.1| exodeoxyribonuclease VII large subunit XseA [Butyrivibrio proteoclasticus B316] gi|302394817|gb|ADL33722.1| exodeoxyribonuclease VII large subunit XseA [Butyrivibrio proteoclasticus B316] Length = 391 Score = 261 bits (666), Expect = 3e-67, Method: Composition-based stats. Identities = 118/367 (32%), Positives = 194/367 (52%), Gaps = 13/367 (3%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK--IEFLPEEGIEFLVI 89 L + V+GE+S + HSSGH YF++KD I ++++G + + F +EG + V Sbjct: 8 LKAITVKGEVSNCK-YHSSGHIYFTIKDAGGAIACVMFRGDRERGGLRFNMQEGQQVKVT 66 Query: 90 GKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIA 149 G I + +YQ+ ++ G+G L E+ KK+L E GLF++++K PIP + Sbjct: 67 GSIDVYERDGRYQLYARQIMLDGAGVLYERYEELKKRLAETGLFAEEYKQPIPRYIHTLG 126 Query: 150 VITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208 V+T+PTGA +RDI+ + R P +++I++P VQGD+ + I I L + Sbjct: 127 VVTAPTGAAVRDIINVATRRNPHIQIILYPAIVQGDQAAESIVKGIEALAQRQ------- 179 Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268 D II+ RGGGSIEDLW FN+E++ +AI + IPIISA+GHETD T+ADY AD RAPTP+ Sbjct: 180 VDTIIVGRGGGSIEDLWAFNEEIVAQAIFDCPIPIISAVGHETDTTIADYVADRRAPTPS 239 Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRY 326 AAE+AV + + + L+ + R + + L + + Sbjct: 240 AAAELAVFEYARFEQDIQDYAYSLHKSMDRALSDLRQREKRYQETLRLLSPMGKVRDRLL 299 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 R+D+ EL+H ++ I + I ++K + ++ +I + + + + + Sbjct: 300 RIDQYQDELQHLMDQKITDARHRLDIDIEKLKGLSPLDRLKGGYSYISDDKGNNIRSISG 359 Query: 387 HLRYIFL 393 R L Sbjct: 360 VQRDDEL 366 Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 39/109 (35%) Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 L ++EK + ++ I + ++ ++ KI + I L+ Sbjct: 274 LRQREKRYQETLRLLSPMGKVRDRLLRIDQYQDELQHLMDQKITDARHRLDIDIEKLKGL 333 Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + + LK GY+ I D N I + + + DG VI+ Sbjct: 334 SPLDRLKGGYSYISDDKGNNIRSISGVQRDDELSLYVTDGVIRTRVIDT 382 >gi|124267668|ref|YP_001021672.1| exodeoxyribonuclease VII large subunit [Methylibium petroleiphilum PM1] gi|124260443|gb|ABM95437.1| Exodeoxyribonuclease VII large subunit [Methylibium petroleiphilum PM1] Length = 447 Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats. Identities = 121/377 (32%), Positives = 191/377 (50%), Gaps = 11/377 (2%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWKG 71 + V+ L + + + + + V VRGE+SGY +SGH YF+LKD + + +++ Sbjct: 27 VWEVAALVHAVADTLAARFASVAVRGEVSGYT-RAASGHCYFTLKDAEGTAALRCAMFRR 85 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++F PEEG + G++ + + Q ++ES+ +G+G L + K +L EG Sbjct: 86 AASLLDFAPEEGHLVELRGRLAVYEPRGELQFVVESMQRAGAGALYERFLRLKAQLEAEG 145 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF K I P I V+TS A + D+L + R P +RVI++P VQG E P + Sbjct: 146 LFDATRKRTIVRHPACIGVVTSLAAAALHDVLTALQRRAPQVRVIVYPSPVQGAEAPAAL 205 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI R D +I+ARGGGS+EDLW FN+ ++VRA+A S IP+I+ IGHE Sbjct: 206 AAAIET------AGRHGRADTLIVARGGGSLEDLWAFNEALVVRAVAASRIPVIAGIGHE 259 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD +L D+AADLRAPTPT AAE+A +E + L +L R + + + L+ Sbjct: 260 TDVSLVDFAADLRAPTPTAAAELAAMPREEALAVLHDLARRARRGVALRLDGQAQRLDRT 319 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L Q L+ R RL L + + + R+ + + +R + + Sbjct: 320 ALRLARPAQALAPHRERLALLSQRQRTAMHRHLERQQQRQAVLASRWMQAARQLRL-RAV 378 Query: 371 QHILEKQQHIEQIVKQH 387 Q + + + Q Sbjct: 379 QRLDVLVARLGALDPQR 395 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 45/161 (27%), Gaps = 22/161 (13%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R+ L + + ++ + + +++ + + + + L R Sbjct: 287 REEALAVLHDLARRARRGVALRLDGQAQRLDRTALRLARPAQALAPHRERLALLSQRQRT 346 Query: 430 ILSHKIKSCH----------------------TSVSITTRILQSFAYKNTLKRGYTSIQD 467 + ++ + + L + + L RGY + D Sbjct: 347 AMHRHLERQQQRQAVLASRWMQAARQLRLRAVQRLDVLVARLGALDPQRVLSRGYAWLGD 406 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 +T L + DG+ A VI P K + Sbjct: 407 AEGRALTSVNQLQPGQTVKARLADGRIEAQVIGIEPDKPRR 447 >gi|322392011|ref|ZP_08065474.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC 700780] gi|321145109|gb|EFX40507.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC 700780] Length = 317 Score = 260 bits (665), Expect = 4e-67, Method: Composition-based stats. Identities = 125/298 (41%), Positives = 178/298 (59%), Gaps = 11/298 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+ + I A IW Sbjct: 27 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDRAVIQATIW 84 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ V+G++ + S Y IIIE P G G L E+ KKKL E Sbjct: 85 SGIYQKLGFDLEEGMKVNVVGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLSE 144 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF D+ K IP K I V+TS +GAVI+DI+ + RFP + +I++P KVQGD + Sbjct: 145 EGLFQDRFKQAIPQFSKRIGVVTSRSGAVIQDIITTVGRRFPGVEIILYPTKVQGDGAAE 204 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N ++ D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 205 EIARNIARANERED------LDVLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 258 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 HETD TLAD+ AD RA TPT AAE+A PV + + + + + ++ K Sbjct: 259 HETDVTLADFVADKRAATPTAAAELATPVSKFDLLTYLKNQEKRMATAVQNTLSKKKK 316 >gi|254251599|ref|ZP_04944917.1| Exonuclease VII large subunit [Burkholderia dolosa AUO158] gi|124894208|gb|EAY68088.1| Exonuclease VII large subunit [Burkholderia dolosa AUO158] Length = 515 Score = 260 bits (665), Expect = 4e-67, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 151/260 (58%), Gaps = 10/260 (3%) Query: 2 NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 +PF+ + VS L+ + ++E + + + GE+S + +SGH YFS+KD Sbjct: 58 SPFAAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 116 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +++ ++++G EF+P EG V +T + + Q+ +E++ +G G L A Sbjct: 117 QQAQMRCVMFRGRAQYAEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 176 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 + K +L EGLF+ + K P+P P+ I ++TS A +RD++ ++ R P + VI++P Sbjct: 177 FLRLKAQLEGEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVVTTLARRAPHIPVIVYP 236 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +++ A+ N +E D++++ RGGGSIEDLW FNDE + RAIA Sbjct: 237 APVQGAGAAEKLVAAVQTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 290 Query: 239 SSIPIISAIGHETDWTLADY 258 S +P++S +GHETD+T+AD+ Sbjct: 291 SELPVVSGVGHETDFTIADF 310 >gi|171059233|ref|YP_001791582.1| exodeoxyribonuclease VII large subunit [Leptothrix cholodnii SP-6] gi|170776678|gb|ACB34817.1| exodeoxyribonuclease VII, large subunit [Leptothrix cholodnii SP-6] Length = 432 Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats. Identities = 113/428 (26%), Positives = 204/428 (47%), Gaps = 14/428 (3%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK--DNHSRIDAIIWKG 71 + V+ L + +++ V VRGE++G +SGH YF+L+ D + + +++ Sbjct: 12 VWDVAALVQAVGDALQARFGAVAVRGELAGVT-RAASGHCYFNLRSVDGSAGLRCAMFRR 70 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + ++F P +G + + G++ + + Q+I+E++ P+G+G L+ + K +L EG Sbjct: 71 AASMLDFTPRDGQQVELRGRLAVYEPRGELQLIVEAMRPAGAGALMEQFLRLKARLEGEG 130 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF K PI P I V+TS A +RD+ + R P +R++I+P VQG + P ++ Sbjct: 131 LFEPSRKRPIEPYPAAIGVVTSLAAAALRDVASALQRRAPQVRLVIYPASVQGADAPAQL 190 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI E +++ RGGGS+EDLW FNDE +VRAIA S +P+I +GHE Sbjct: 191 VEAIRLAGQRAE------VQTLLVCRGGGSLEDLWAFNDEQVVRAIAASPLPVICGVGHE 244 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD+TLAD+AADLRAPTPT AAE+A P + +L L+ + + L+ + Sbjct: 245 TDFTLADFAADLRAPTPTAAAELAAPARADCLQALAQQARWLSQRVHHRLDRDAQRLDRI 304 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + L L RL L + + + + + +R++ + + Sbjct: 305 AQRLARPADALRGHLQRLALLEQRHARAAPVWLQGQQHRLERLQSRLQDAGARALQSREQ 364 Query: 371 QH--ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT--HIKKLITR 426 + + ++ Y +L + + Q R+ + + ++ Sbjct: 365 TLAVLAARHAALDPGQVLRRGYAWLNDASGQPVTSVRALQPGQRLSAVLQDGRVDSVVEA 424 Query: 427 IEFILSHK 434 + ++ + Sbjct: 425 VLPAMARR 432 Score = 97.9 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 20/159 (12%), Positives = 60/159 (37%), Gaps = 5/159 (3%) Query: 355 NRIKSDFLIHNIQKNR--QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + +++ R + Q +++I ++ R + + + + + Sbjct: 274 DCLQALAQQARWLSQRVHHRLDRDAQRLDRIAQRLARPADALRGHLQRLALLEQRHARAA 333 Query: 413 ---IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + +++L +R++ + ++S ++++ + L+RGY + D + Sbjct: 334 PVWLQGQQHRLERLQSRLQDAGARALQSREQTLAVLAARHAALDPGQVLRRGYAWLNDAS 393 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 +T R L R+ DG+ +++V P + Sbjct: 394 GQPVTSVRALQPGQRLSAVLQDGRVDSVVEAVLPAMARR 432 >gi|225025923|ref|ZP_03715115.1| hypothetical protein EUBHAL_00159 [Eubacterium hallii DSM 3353] gi|224956709|gb|EEG37918.1| hypothetical protein EUBHAL_00159 [Eubacterium hallii DSM 3353] Length = 402 Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats. Identities = 101/360 (28%), Positives = 176/360 (48%), Gaps = 14/360 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +SV++++ ++ I ES+ L + ++GE+S + HSSGH YF+LKD S + +++ Sbjct: 4 IFSVTQINSYIHRIFESDYALKKIYLKGEVSNCK-YHSSGHIYFTLKDEKSALRCVMFSS 62 Query: 72 -TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + F E+G G I+ + + YQ+ + + SG+G L E+ K++L ++ Sbjct: 63 DRYKGLTFHLEDGQLIEACGNISVYEQTGTYQMYVRKIELSGAGELYIRYEQLKQELAQK 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G F + K P+P P+ I ++T+ TGA I DI R P +++ ++P KVQG+ + Sbjct: 123 GYFDFERKKPLPPYPEKIGIVTALTGAAIEDIKSIAKRRNPSVQLYLYPSKVQGEGAAAQ 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA I +T IEDLW FN+ + AI + PIIS GH Sbjct: 183 IARGIRYFDTAGVDIIIIGRGGGS-------IEDLWAFNEIEVADAIYYADTPIISGTGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+ADY AD+RA TP+ A E+A+P + + N + L ++ + + Sbjct: 236 EIDMTIADYCADVRAATPSAACELAIPDMTSFYTRMHNYQEVLGTLLQQKLMLMYGKTAL 295 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L D+ L + +RL L+ + + + F ++R+ + ++ Sbjct: 296 LERQLEAQRPDKKLMSHQLIYERLEGRLQQAMRDKYQSRQQQFTRYVDRLSALSPTSRLR 355 Score = 77.5 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 54/135 (40%), Gaps = 2/135 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + Q+ + +++Q + + + K + + ++ ++ ++L R++ + Sbjct: 270 RMHNYQEVLGTLLQQ--KLMLMYGKTALLERQLEAQRPDKKLMSHQLIYERLEGRLQQAM 327 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 K +S + L + + + L+ GY Q N +T + + I F D Sbjct: 328 RDKYQSRQQQFTRYVDRLSALSPTSRLRGGYVFAQTKEGNPLTSAGQIEKENPFFITFSD 387 Query: 492 GQANAIVINKAPPKE 506 GQA + ++ K+ Sbjct: 388 GQAEVMPVSVKKNKK 402 >gi|289523060|ref|ZP_06439914.1| exodeoxyribonuclease VII, large subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503603|gb|EFD24767.1| exodeoxyribonuclease VII, large subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 410 Score = 260 bits (664), Expect = 5e-67, Method: Composition-based stats. Identities = 123/371 (33%), Positives = 194/371 (52%), Gaps = 13/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 P SV EL+++LK ++E + L +V V+GEI + H+SGH YFS+ Sbjct: 2 PLLNNLPKTSNVISVDELTFYLKDLIEKDPILRNVAVKGEIIEIK-RHNSGHVYFSIGSK 60 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 SR+ +++K N I P+ G E +V G I +P YQ+ +++P G G A Sbjct: 61 QSRLSCVMFKSNANYIPLWPQAGDEVIVQGYIGLYPPQGAYQLYARNILPLGKGAQTRAK 120 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ KK+L +EGLF + K +P P + V+TS TGA ++D+++ RFP R+ +FP Sbjct: 121 EELKKRLEKEGLFDPRVKRKLPPYPNKVGVVTSQTGAAVKDVIKVAKKRFPQCRIYVFPT 180 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E P++I A+ DI++L RGGGS +DL F+DE +VR+I Sbjct: 181 LVQGIEAPQDIVRAMQLA-------ATKELDILLLVRGGGSRDDLTPFDDERVVRSIRAC 233 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P+++ +GHE DWTL+D AAD+RAPTP+ AAE P + L + +++ARL ++++ Sbjct: 234 PFPVVTGVGHEIDWTLSDLAADMRAPTPSAAAENVFPDRIELYKQIRHMKARLLSLVLHK 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCS--RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + N L L N + L + RL + L N+ II H + Sbjct: 294 CQQVSNLCERQLARLQNILKNLYLHPAGIEIARLTQNLSMNMNKIISSLKERLTHSAASL 353 Query: 358 KSDFLIHNIQK 368 + + + + Sbjct: 354 DALSPLKCLSR 364 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 58/170 (34%), Gaps = 9/170 (5%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ-------KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + + +++ + + + I + + +V + + + Sbjct: 243 HEIDWTLSDLAADMRAPTPSAAAENVFPDRIELYKQIRHMKARLLSLVLHKCQQVSNLCE 302 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 ++A L + + + I +L + ++ I S ++ + L + + Sbjct: 303 RQLARLQNILKNL--YLHPAGIEIARLTQNLSMNMNKIISSLKERLTHSAASLDALSPLK 360 Query: 457 TLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 L RG+ + + + +A + + DG+ANA + + +E Sbjct: 361 CLSRGWITCLSKDGETVVSLSQVAVGDEVSLCMIDGRANAEITSIHFKEE 410 >gi|261366963|ref|ZP_05979846.1| exodeoxyribonuclease VII, large subunit [Subdoligranulum variabile DSM 15176] gi|282571081|gb|EFB76616.1| exodeoxyribonuclease VII, large subunit [Subdoligranulum variabile DSM 15176] Length = 407 Score = 260 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 111/351 (31%), Positives = 180/351 (51%), Gaps = 11/351 (3%) Query: 17 VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 V+ L++ K+++ L+ + V GE+SG+ + SGH YF+LKD ++ + ++++ Sbjct: 7 VTTLNHLAKNVLAQCEPLNDLIVCGEVSGFTRHYKSGHLYFTLKDENASVKCVMFRNQAR 66 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + F P+ G+ L G T + +Q+ ++ + P G+G A + KKL EGLF+ Sbjct: 67 LLNFEPQNGMLVLAYGHATIYERDGAFQLYVDYMRPFGAGAAQMAFDALYKKLEAEGLFA 126 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K P+P +P I V+TS TGA +D+ I R+P +++++ PV VQG E + I Sbjct: 127 PERKRPLPPVPHCIGVVTSKTGAAWQDVQNVIGRRWPMVKLLLAPVNVQGLEAERSIVAG 186 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I L+ PRP++I++ RGGGS EDLW FN E I R A P++SA+GHE D Sbjct: 187 IRALDR------DPRPELILVTRGGGSKEDLWIFNSERIAREAAACHKPVVSAVGHEIDT 240 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS--LL 311 T+ DY DLRAPTP+ AAE+ VP + + + L+ + N I I+ N + Sbjct: 241 TILDYVVDLRAPTPSAAAELCVPDQAEVLQKISVLQRNIQNNIQNHIQICYNKYTMASVR 300 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 +A + Q + L R ++ I + +S Sbjct: 301 QAYQHQVQKTARFAQELKRASSLIQQAQRHQIALSDSALSAAAALAESLNP 351 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 46/118 (38%), Gaps = 4/118 (3%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q I Q++I+ ++ H++ K +A + + + +K+ + I+ Sbjct: 270 QKISVLQRNIQNNIQNHIQIC--YNKYTMASVRQAYQHQVQKTARFAQELKRASSLIQQA 327 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 H+I +++S + +S L RGYT + + +L +I + Sbjct: 328 QRHQIALSDSALSAAAALAESLNPYGILARGYTIV--KRGGEVRPVEDLLPGQQIQVQ 383 >gi|262276799|ref|ZP_06054592.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium HIMB114] gi|262223902|gb|EEY74361.1| exodeoxyribonuclease VII, large subunit [alpha proteobacterium HIMB114] Length = 400 Score = 259 bits (662), Expect = 7e-67, Method: Composition-based stats. Identities = 133/295 (45%), Positives = 176/295 (59%), Gaps = 11/295 (3%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + PE+SV+E S K+I+E N S + VRGEIS + GH YF++KD + ++++ W Sbjct: 3 NIPEFSVTEFSNLAKNILEENFSLIRVRGEISSVKNF--KGHLYFTIKDENFVLNSVCWA 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSK--YQIIIESLIPSGSGTLLTALEKRKKKLL 128 + ++ PE+GIE + GKI+T+ SS YQ+ + + G G LL +E+RKKKL Sbjct: 61 SKVPYLQIQPEDGIEVIAEGKISTYAKSSISIYQLQVNQIEIKGEGALLKLIEQRKKKLE 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EEGLF DQ+K IP PK I VITSPTGAVI DI+ RI RFP + ++PV VQG Sbjct: 121 EEGLFDDQNKKSIPVFPKNIGVITSPTGAVIMDIIDRIEARFPTNIKLYPVSVQGTNAVN 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E+ + + D +I+ARGGG IEDL FNDE +VR + PIISAIG Sbjct: 181 EVIAGLKFF-------ENNKVDTLIIARGGGGIEDLMPFNDENLVREVYKLKTPIISAIG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 HETD+TL D+ ADLRA TPT AAE AVP +++ LE L I I Sbjct: 234 HETDFTLLDFVADLRAATPTAAAEYAVPELKNILEKKSFLEKSLTQTISNFINNN 288 Score = 63.6 bits (153), Expect = 7e-08, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 2/131 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIE 428 ++ILEK+ +E+ + Q + + ++ + + I ++ ++ I Sbjct: 264 KNILEKKSFLEKSLTQTISNFINNNLRILKNMNSIFNSKVLRKIIHDNKKNLSLVMKSIN 323 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 F IK + + ++ + + LKRG+ I+D N I + L I I Sbjct: 324 FNSKSLIKMKYIELRRLGSLVSTLNIDDILKRGFVLIRDKNMRIIKNSKILKKNKNINIK 383 Query: 489 FFDGQANAIVI 499 FFD A + Sbjct: 384 FFDDDLFAEIK 394 >gi|304316763|ref|YP_003851908.1| exodeoxyribonuclease VII large subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778265|gb|ADL68824.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 403 Score = 259 bits (662), Expect = 8e-67, Method: Composition-based stats. Identities = 125/359 (34%), Positives = 206/359 (57%), Gaps = 13/359 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V +++ +LK IV S+ L H+ ++GEIS + YF+L D +S + ++++ Sbjct: 6 LTVKQVNDYLKSIVGSDIILKHIMIKGEISNLHFRGQA--LYFTLVDEYSSLKCVMFEEY 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +N + + G+ + G+I+ + S +++++ + G+G L + EK K+KL EGL Sbjct: 64 VNDLNIDVKNGMSVIATGRISVYEKSGAFELLVSKIDVEGAGALFLSFEKLKQKLRNEGL 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F K PIP P I VITSPTGA I DI+ + R P + +++ P+ VQG EI Sbjct: 124 FDSGKKKPIPKNPNKIGVITSPTGAAIHDIINILRRRKPSIDILVVPILVQGSSASLEIE 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI ++N D+IIL RGGGS ED + FN+E + RAI NS IPIISA+GHET Sbjct: 184 EAIKKVNRR------NDVDLIILGRGGGSFEDFYPFNEERVARAIYNSRIPIISAVGHET 237 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T+AD+ ADLRAPTP+ AAE+AV + N + L + + +I K + LNSL Sbjct: 238 DFTIADFVADLRAPTPSAAAELAVTDVNIYNEKIENYKRSLYHYAMSIIINKRHHLNSLK 297 Query: 312 KALPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 K++ + + + + RL+ L R +E ++ +I K + +I+++ + ++ +++ Sbjct: 298 KSIMSKNPIVKNQQLKIRLNSLNRIMEDSIYSVINNKKFKYISLIDKLNTLSPLNVLKR 356 Score = 83.7 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 6/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + + + IE + Y K L+ Sbjct: 235 HETDFTIADFVADLRAPTPSAAAELAVTDVNIYNEKIENYKRSLYHYAMSIIINKRHHLN 294 Query: 404 MLRE-----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L++ + L + L +E + I + L + + N L Sbjct: 295 SLKKSIMSKNPIVKNQQLKIRLNSLNRIMEDSIYSVINNKKFKYISLIDKLNTLSPLNVL 354 Query: 459 KRGYTSIQDTNN-NFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT D +N IT+ NL+ +I + F DG+A V Sbjct: 355 KRGYTLTMDKDNVRPITKVENLSANDKIYVLFEDGEAKCTVNEV 398 >gi|320537232|ref|ZP_08037194.1| exodeoxyribonuclease VII, large subunit [Treponema phagedenis F0421] gi|320145907|gb|EFW37561.1| exodeoxyribonuclease VII, large subunit [Treponema phagedenis F0421] Length = 393 Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats. Identities = 131/369 (35%), Positives = 204/369 (55%), Gaps = 10/369 (2%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 YSV E++ +K ++E +LS V+GEIS + S+GH YF+LKD+ + + A+++K Sbjct: 2 IKVYSVKEITAEIKALLEGSLSRCTVQGEISNCK-PSSTGHLYFALKDDKALLQAVMFKS 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L + F P++G+ + G I+ + YQII E + +G G +L LE+RK KLL EG Sbjct: 61 KLWALNFEPKDGMLVQITGNISVYEQRGSYQIIAEKMQLAGEGDILRLLEERKNKLLREG 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF + K +PF PK IAVITSPTGA +RDI+ I+ R + +++ P VQG E I Sbjct: 121 LFDAEKKKTLPFFPKTIAVITSPTGAAVRDIINVITRRNQKVNILVLPAAVQGAEAAASI 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + +N +II+ RGGGS+EDL F+DE +VRAIA S+IP+ISA+GHE Sbjct: 181 IAQLKIVN------VHKLASVIIVGRGGGSLEDLLPFSDEQVVRAIAESNIPVISAVGHE 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TDW L+DY ADLRAPTP+ AAE+A P+ + + + L +++ I++ ++ Sbjct: 235 TDWALSDYVADLRAPTPSAAAELAAPLLDDIINKFTEDREILISLMRARIEHIKLMISGF 294 Query: 311 L-KALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + + R D L N + + N + + I+ + + Sbjct: 295 DPETLEMKFRRIEQPFLLRFDDAKEALLRNFSSRLEKVRHKVNLLQHSIEGANPQTILNR 354 Query: 369 NRQHILEKQ 377 + ++Q Sbjct: 355 GYAIVRDEQ 363 Score = 76.7 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 30/80 (37%) Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 + S +++ V++ ++ + L RGY ++D I + Sbjct: 313 RFDDAKEALLRNFSSRLEKVRHKVNLLQHSIEGANPQTILNRGYAIVRDEQGKTIRDASS 372 Query: 479 LATKTRILINFFDGQANAIV 498 + +T+++I G A V Sbjct: 373 VPKRTKLIITPAKGSLEAEV 392 >gi|325680794|ref|ZP_08160332.1| exodeoxyribonuclease VII, large subunit [Ruminococcus albus 8] gi|324107574|gb|EGC01852.1| exodeoxyribonuclease VII, large subunit [Ruminococcus albus 8] Length = 396 Score = 259 bits (661), Expect = 1e-66, Method: Composition-based stats. Identities = 118/361 (32%), Positives = 197/361 (54%), Gaps = 13/361 (3%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +VS+L+ L + E V V+GEI+ + + +GHA+FS+KD S I +++ G Sbjct: 3 VLTVSQLNKLLAFKIKQELKFKGVAVKGEIANFNVHYKTGHAFFSIKDESSSIRCVMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEE 130 + K++ LP +G+ LV+G + QI + + G G + E K+KL ++ Sbjct: 63 RVKKLKALPADGMSVLVMGAADVYERDGICQINVTDIAVLGDEGIVHAQNELVKEKLKKQ 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI-IFPVKVQGDECPKE 189 G+F K PIP +PK +A++TS TGA ++DIL + R+PL V+ ++P VQGD P+ Sbjct: 123 GVFDRSRKKPIPLVPKKLAIVTSLTGAALQDILNVVGRRYPLCVVEVYPATVQGDTAPES 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + A+ + D IIL+RGGGS E L FNDE +V A+A P+ISA+GH Sbjct: 183 VCRALYAADLS-------GADTIILSRGGGSAESLEAFNDESVVLAVAACKTPVISAVGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E + TL+DYAAD+RAPTP+ AAE+A P + S+L + ARL++ + ++ ++ + Sbjct: 236 EINTTLSDYAADMRAPTPSAAAEIATPDISEMYSALSVMRARLDSSLGIYLRGRMIDVER 295 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + + ++ S RL L + L +E + +++++ + + Sbjct: 296 LDTRLRSVSPARRVNESEKRLSELEKHLRMLMENRLKICDMRLERGVSQLQMLSPFNVLN 355 Query: 368 K 368 + Sbjct: 356 R 356 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 55/134 (41%), Gaps = 3/134 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + + + ++ + +LR ++ + L + R+ + +L Sbjct: 264 ISEMYSALSVMRARLDSSLGIYLRGRMIDVERLDTRLRSV--SPARRVNESEKRLSELEK 321 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + ++ +++K C + LQ + N L RGYT ++ ++ +T L+ + Sbjct: 322 HLRMLMENRLKICDMRLERGVSQLQMLSPFNVLNRGYTLVER-DDRAVTAACELSDGDAV 380 Query: 486 LINFFDGQANAIVI 499 I F DG +A++ Sbjct: 381 KIRFADGSVDAVIK 394 >gi|257791480|ref|YP_003182086.1| exodeoxyribonuclease VII, large subunit [Eggerthella lenta DSM 2243] gi|257475377|gb|ACV55697.1| exodeoxyribonuclease VII, large subunit [Eggerthella lenta DSM 2243] Length = 480 Score = 258 bits (660), Expect = 1e-66, Method: Composition-based stats. Identities = 107/489 (21%), Positives = 178/489 (36%), Gaps = 60/489 (12%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVS K +E V + GE+S YF++KD + + ++W Sbjct: 34 LSVSGAMALAKGALEGV--TVRLVGEVSEVSNKPGYKAVYFTVKDQRAALPCMMWNNRFQ 91 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 G + G+ T + + + S+ +G G L + +KL EGL + Sbjct: 92 ASGVRLAVGQLVELTGRFTLYAPKGRMNFDVFSIALAGEGNLRMQVANLARKLEAEGLMA 151 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 K P+P P ++ ++TSP GA + D+L+ + RFPL RV++ V V+G P I Sbjct: 152 PARKRPVPAYPALVGLVTSPRGAAVHDVLRTLRRRFPLARVLVAGVAVEGSNAPAGIVEG 211 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + +++++ RGGGS EDL FNDE + R IA +P+++ IGHE D Sbjct: 212 MRAVVRA-------GAEVVLVVRGGGSFEDLMPFNDEGLARMIAKCPVPVVTGIGHEPDT 264 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++AD ADLRA TPT AAE P +E L + L + R + + Sbjct: 265 SIADMVADLRASTPTAAAEAVSPARESLGRLFEARSSSLRASMSRALDRAGAEVRRCATR 324 Query: 314 LPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 D L + LD L L + R R+ + L ++ ++R Sbjct: 325 PLFCDAQLLYATEAQMLDLASDRLFRALPANLARDEASVARQRERL-ACALPASLDRSRT 383 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + +++ + + + A Sbjct: 384 RLEHERERLASCGGALVPRFGQQAALAAAR------------------------------ 413 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 L + L RGY + + + T + + D Sbjct: 414 -----------------LHDLSPLAVLGRGYAIARTEDGAVVKSVEAAPPGTAVDVAVAD 456 Query: 492 GQANAIVIN 500 G V Sbjct: 457 GVLACRVEQ 465 >gi|146297125|ref|YP_001180896.1| exodeoxyribonuclease VII, large subunit [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410701|gb|ABP67705.1| Exodeoxyribonuclease VII large subunit [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 452 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 133/499 (26%), Positives = 202/499 (40%), Gaps = 66/499 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 N + E+SV EL+ +L+ VE + L ++ ++GE+ R S H YF LKD + Sbjct: 4 DNIVSKKEWSVYELTSYLRKKVEMDILLKNIYLKGEV--IRPTLSGEHLYFELKDLEYDA 61 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 ++ + + + G + LV G + + +I + + G G L L++ Sbjct: 62 KVKCVYFWFDK---KIEVRHGTKVLVKGSVIFYEKEGIIEIKVSEITDIGLGELFVKLKQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKV 181 ++KL +EGLF +HK IP PK I ++TS GA +RDIL I +F + V IF V Sbjct: 119 LEEKLKQEGLFDQKHKKEIPRYPKKIGIVTSKNGAAVRDILNTIYSKFENIEVYIFNCSV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG P EI I N + ++II+ RGGG+ EDL FNDEM+VR I S I Sbjct: 179 QGQNAPYEICEGIEYFNNILP------VEVIIVGRGGGAFEDLMAFNDEMVVRKIFESKI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D+ L D+ ADLRA TPT A E+ V + L ++ N+I + I+ Sbjct: 233 PVISAVGHERDYVLTDFVADLRAITPTNAGEIVVSFQNKALEKLDEYCRKIKNLISKKIE 292 Query: 302 YKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 L L L L+ D L +L L + + + R+ Sbjct: 293 SSREDLKLQLYRLYQNSPSNKLTKLAQDADLLSSKLTFLLNKKLHHISSNLKILEKRLSV 352 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 K + + + K + Sbjct: 353 SGPYVRFAKAKNDYEMLLKRLNIAFKNFCQ------------------------------ 382 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 I L + N LKRGY+ N+ +T R + Sbjct: 383 -----------------KKEFEFKIKVEKLIALNPLNILKRGYSVTIH-NSKVLTTVRVV 424 Query: 480 ATKTRILINFFDGQANAIV 498 + I+ DG + V Sbjct: 425 SIGDEIVTRITDGIIKSKV 443 >gi|323705300|ref|ZP_08116875.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacterium xylanolyticum LX-11] gi|323535202|gb|EGB24978.1| exodeoxyribonuclease VII, large subunit [Thermoanaerobacterium xylanolyticum LX-11] Length = 407 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 127/367 (34%), Positives = 214/367 (58%), Gaps = 13/367 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V +++ +LK+IV + L HV V+GEIS + YF+L D +S + ++++ Sbjct: 6 LTVKQVNDYLKNIVAGDIILKHVMVKGEISNLHFRGQA--LYFTLVDEYSSLKCVVFEDY 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++ I + G+ +V GK+ + SS +Q+ + ++ G G+L + E+ K+KL EGL Sbjct: 64 IDNINVEVKNGMSVIVTGKVYVYEKSSSFQLHVFNIEVEGLGSLFLSFERLKQKLKSEGL 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F K +P PK +AVITSP+GA + DI+ + R P + +++ P+ VQG++ EI Sbjct: 124 FDLDKKKNLPKNPKKVAVITSPSGAAVHDIINILRRRKPSIDIMMVPILVQGNKASSEIV 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 +AI+++N + D+IIL RGGGS EDL+ FNDE++ RAI NS IP+ISA+GHET Sbjct: 184 DAIIKVNKRSD------IDLIILGRGGGSFEDLYPFNDEIVARAIYNSRIPVISAVGHET 237 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D+T++D+ ADLRAPTP+ AAE+AV + N L ++ +I K + L++L Sbjct: 238 DFTISDFVADLRAPTPSAAAELAVTDVNFYNEKIKNYRRSLYRYMLSIIDKKRHRLDNLK 297 Query: 312 KAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 K L N + RLD L R +E ++ I+ K + ++I ++ + ++ +++ Sbjct: 298 KLLIGKNPIIKNRQMKERLDTLNRIMEDSIYKILRDKKLQYVNLIEKLNTLSPLNVLKRG 357 Query: 370 RQHILEK 376 ++K Sbjct: 358 YTMTMDK 364 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 3/133 (2%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEF 429 EK ++ + + +++ I +K+ ++ L L + + + + L +E Sbjct: 266 FYNEKIKNYRRSLYRYMLSIIDKKRHRLDNLKKLLIGKNPIIKNRQMKERLDTLNRIMED 325 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILIN 488 + ++ L + + N LKRGYT D + NN +T+ +++ +I + Sbjct: 326 SIYKILRDKKLQYVNLIEKLNTLSPLNVLKRGYTMTMDKDKNNLVTKANDISADDKIYLL 385 Query: 489 FFDGQANAIVINK 501 F DG+A V Sbjct: 386 FEDGEALCTVNEV 398 >gi|183221244|ref|YP_001839240.1| exodeoxyribonuclease VII large subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911335|ref|YP_001962890.1| exodeoxyribonuclease VII large subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776011|gb|ABZ94312.1| Exodeoxyribonuclease VII, large subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779666|gb|ABZ97964.1| Exodeoxyribonuclease VII large subunit (Exonuclease VII large subunit) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 431 Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 117/369 (31%), Positives = 178/369 (48%), Gaps = 11/369 (2%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVSE++ +K ++ + VRGEIS Y +SSGH YFSLKD S I + Sbjct: 8 LSVSEVNRRIKAKLQDAPEFKNFWVRGEISNYSQTNSSGHMYFSLKDTTSVIKCAFFSYQ 67 Query: 73 LNKIE-FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + G+E LV G ++ + Y I ++ + G G +L +EK KK L E+G Sbjct: 68 AKNYKGTPLRNGMEILVYGSVSVYEPGGYYSITVQKIEELGEGDILLRIEKLKKTLAEKG 127 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F HK P+P PK + ++TSP GA + DI++ + P +++++ P VQGD I Sbjct: 128 IFDASHKRPLPKFPKRLGIVTSPKGAAVEDIIRIATDLNPSIQILVSPCLVQGDGAENSI 187 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 AI ++N D+II RGGGS EDL FN E +V A S +PIISA+GHE Sbjct: 188 IEAIKEIN-----DPKWEVDVIIAGRGGGSFEDLMAFNQESVVMAYYQSRLPIISAVGHE 242 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL--N 308 D L D AAD PTPT AA++A+P L +E RL + + +I+ Sbjct: 243 IDRVLTDLAADATTPTPTAAAKLAIPNVSDTLIRLDEMEDRLRSALTGVIRIGKEKWFGV 302 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L N L + D + ++ + + +K F ++ Sbjct: 303 TNRAVLQNPKSILEPRQNHFDEIITKISLLGKNYLVKKQSEFQKFEVFHQNWKSYLERVH 362 Query: 369 NRQHILEKQ 377 N+ + E++ Sbjct: 363 NKFRLAEQR 371 Score = 87.9 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 65/207 (31%), Gaps = 23/207 (11%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N + + + + H ++ ++ + I N+ + E Sbjct: 220 NQESVVMAYYQSRLPIISAVGHEIDRVLTDLAADATTPTPTAAAKLAIPNVSDTLIRLDE 279 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-------- 427 + + + +R + + + K+ + H ++IT+I Sbjct: 280 MEDRLRSALTGVIRIGKEKWFGVTNRA--VLQNPKSILEPRQNHFDEIITKISLLGKNYL 337 Query: 428 -------------EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++ H + + L F+ TLKRGY+ +++TN I+ Sbjct: 338 VKKQSEFQKFEVFHQNWKSYLERVHNKFRLAEQRLDHFSPLGTLKRGYSVLRNTNKQVIS 397 Query: 475 QKRNLATKTRILINFFDGQANAIVINK 501 + + + + FDG+ V Sbjct: 398 SVKQIQKNETLEVFLFDGKLQVEVKET 424 >gi|330507795|ref|YP_004384223.1| exodeoxyribonuclease VII, large subunit [Methanosaeta concilii GP-6] gi|328928603|gb|AEB68405.1| exodeoxyribonuclease VII, large subunit [Methanosaeta concilii GP-6] Length = 401 Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats. Identities = 117/363 (32%), Positives = 198/363 (54%), Gaps = 17/363 (4%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 ++V+ L+ ++ +E++ L + +GE+S + H SGH YF+LKD S+I +++ Sbjct: 2 TQIFTVTNLNERIRERLENDPRLHDLWAQGEVSNFVH-HRSGHMYFTLKDRDSQISCVLF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKRKKKLL 128 KG + ++E G+ L+ G + + + Q++ ++ +G G E KKKL Sbjct: 61 KGNIGQVETELRNGMNVLLFGDVAVYRPQGRVQLVARAIKRDAGLGFRFLQFEALKKKLG 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 EEGLF + K P+P P+ I ++TS GA +RD+++ I +P R+II P +VQG++ + Sbjct: 121 EEGLFDQEQKRPLPLYPERIGIVTSLQGAALRDVVRTIG-PYPARIIISPARVQGEKAEE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I +A+L L R D+II+ RGGGS EDLW FN E++ RA+ P+ISA+G Sbjct: 180 SIVSALLAL--------QGRTDLIIVCRGGGSAEDLWCFNSEVVARAVFACDSPVISAVG 231 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD T+ D+AAD+RA TPT AA++AVP L+ L + R+ + ++ K L Sbjct: 232 HETDVTITDFAADMRAATPTAAAKIAVPDVADLKIRLEQSQVRIMRALWTSLERKEERLE 291 Query: 309 SLLKALPNSDQTLS---CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + ++L + + S R RLD L L+ ++ + + ++ + Sbjct: 292 YIQRSL-SPSRMYSITGDLRQRLDHLSDGLDLAQAEMLKARKTRLDAAKGKLAAVGPRAT 350 Query: 366 IQK 368 +Q+ Sbjct: 351 LQR 353 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 50/152 (32%), Gaps = 6/152 (3%) Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-- 411 +++ + + + + +EQ + +R ++ + K L ++ Sbjct: 242 AADMRAATPTAAAKIAVPDVADLKIRLEQSQVRIMRALWTSLERKEERLEYIQRSLSPSR 301 Query: 412 ---RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 L + L ++ + +K+ T + L + + TL+RGY ++ Sbjct: 302 MYSITGDLRQRLDHLSDGLDLAQAEMLKARKTRLDAAKGKLAAVGPRATLQRGYALVRSK 361 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVIN 500 + ++ + + G ++ Sbjct: 362 KGLVV-AWDDVLPGEEVELILGRGALRCRILE 392 >gi|167750988|ref|ZP_02423115.1| hypothetical protein EUBSIR_01973 [Eubacterium siraeum DSM 15702] gi|167656167|gb|EDS00297.1| hypothetical protein EUBSIR_01973 [Eubacterium siraeum DSM 15702] Length = 406 Score = 257 bits (656), Expect = 3e-66, Method: Composition-based stats. Identities = 116/359 (32%), Positives = 187/359 (52%), Gaps = 15/359 (4%) Query: 16 SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS+++ L IV + L+ + V GEIS + +SGH YF+LKD + I +++ G Sbjct: 8 TVSQVTRRLSMIVKGDKALNDLYVSGEISNFTLHKASGHMYFTLKDETASIKCVMFAGNA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F P G +V G + + QI + +I G G L A E+ K++L G F Sbjct: 68 RSLDFTPYSGQSVIVHGSVNVYERDGANQIYVTDMIERGQGELALAYEQAKRELEAGGYF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 K PIP PK + +IT+ GA ++D+L I+ R P+ V+ PV VQG P + Sbjct: 128 --NKKRPIPKQPKKVCLITAEKGAALQDMLNIIARRRPILEVVFIPVTVQGAYAPSTLIK 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ D+II+ RGGGS EDL FND +A+ NS IP ISA+GHETD Sbjct: 186 ALALA-------QSTGSDLIIIGRGGGSAEDLSCFNDVGYAKALYNSEIPTISAVGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL-EARLNNIIIRLIKYKINTLNSLL 311 +T++D+ AD RAPTP+ AAE+A V S I L RL++II ++S+ Sbjct: 239 FTISDFVADFRAPTPSAAAEIATAVTCDDLSEHIELVYDRLSDIIHSKTDSYEQLIDSIQ 298 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + Q + S L + ++ + +I + ++ ++I++ I+ +++ Sbjct: 299 RHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 1/107 (0%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 H+ RI + + +I I + + +++ + N LKR Sbjct: 298 QRHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 GY+++ NN+ + ++ + I F DG A A + ++ Sbjct: 358 GYSAVT-KNNSAVNSIGDIEQNDTVEILFADGTATAQIKEIHENNKE 403 >gi|325831438|ref|ZP_08164692.1| exodeoxyribonuclease VII, large subunit [Eggerthella sp. HGA1] gi|325486692|gb|EGC89140.1| exodeoxyribonuclease VII, large subunit [Eggerthella sp. HGA1] Length = 475 Score = 257 bits (656), Expect = 4e-66, Method: Composition-based stats. Identities = 107/489 (21%), Positives = 178/489 (36%), Gaps = 60/489 (12%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVS K +E V + GE+S YF++KD + + ++W Sbjct: 29 LSVSGAMALAKGALEGV--TVRLVGEVSEVSNKPGYKAVYFTVKDQRAALPCMMWNNRFQ 86 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 G + G+ T + + + S+ +G G L + +KL EGL + Sbjct: 87 ASGVRLAVGQLVELTGRFTLYAPKGRMNFDVFSIALAGEGNLRMQVANLARKLEAEGLMA 146 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 K P+P P ++ ++TSP GA + D+L+ + RFPL RV++ V V+G P I Sbjct: 147 PARKRPVPAYPALVGLVTSPRGAAVHDVLRTLRRRFPLARVLVAGVAVEGSNAPAGIVEG 206 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + +++++ RGGGS EDL FNDE + R IA +P+++ IGHE D Sbjct: 207 MRAVVRA-------GAEVVLVVRGGGSFEDLMPFNDEGLARMIAKCPVPVVTGIGHEPDT 259 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++AD ADLRA TPT AAE P +E L + L + R + + Sbjct: 260 SIADMVADLRASTPTAAAEAVSPARESLGRLFEARSSSLRASMSRALDRAGAEVRRCATR 319 Query: 314 LPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 D L + LD L L + R R+ + L ++ ++R Sbjct: 320 PLFCDAQLLYATEAQMLDLASDRLFRALPANLARDEASVARQRERL-ACALPASLDRSRT 378 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + +++ + + + A Sbjct: 379 RLEHERERLASCGGALVPRFGQQAALAAAR------------------------------ 408 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 L + L RGY + + + T + + D Sbjct: 409 -----------------LHDLSPLAVLGRGYAVARTEDGAVVKSVEAAPPGTAVDVAVAD 451 Query: 492 GQANAIVIN 500 G V Sbjct: 452 GVLACRVEQ 460 >gi|168335573|ref|ZP_02693636.1| exodeoxyribonuclease VII, large subunit [Epulopiscium sp. 'N.t. morphotype B'] Length = 405 Score = 257 bits (656), Expect = 4e-66, Method: Composition-based stats. Identities = 114/364 (31%), Positives = 181/364 (49%), Gaps = 14/364 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +D + EL++++ I+ + L+ + +R EIS H SGH YFSLKD ++ I A+ Sbjct: 1 MDRKIIGIGELNHYVAAILHEDYILNSIWLRAEISNLT-YHKSGHLYFSLKDENAGIQAV 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ +++ F +G++ LV +I + YQ + + G GTL + + K L Sbjct: 60 MFSQYASQLNFQLVDGMKVLVRCQIGLYEKVGNYQAYVYEIEQEGLGTLYSQFLELKSTL 119 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDEC 186 ++G F P+ P + +ITS TGA I DI++ R + + I+P VQG Sbjct: 120 EQKGYFD--KHQPLAKYPAAVGIITSKTGAAIXDIIRVGRRRNKTIPIYIYPASVQGQYA 177 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 EI AI + N D+IIL RGGGSIEDLW FN+ + AI NS IPI+ A Sbjct: 178 QNEIVWAIEKANA------DAIVDVIILGRGGGSIEDLWCFNELAVALAIYNSKIPIVCA 231 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHE T++D+ AD RA TP+ AAE+ P ++L L+NI+ ++ Sbjct: 232 VGHEIXXTISDFVADHRAATPSAAAEIVFPNLXDTVATLKYHIRTLDNIMKTKVRECEVN 291 Query: 307 LNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 LN L+ + + LD L +L ++ I+ +K N + +I+ I Sbjct: 292 LNDLINRPIFKDKTKMYLQKIQELDLLAEDLNERIQDILHQKKMELNLNLKQIEKLSPIA 351 Query: 365 NIQK 368 I + Sbjct: 352 TILR 355 Score = 80.6 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 51/138 (36%), Gaps = 2/138 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + ++ I+K +R + + I + + + L + + Sbjct: 270 LKYHIRTLDNIMKTKVRECEVNLNDLINR--PIFKDKTKMYLQKIQELDLLAEDLNERIQ 327 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + +++ + ++ + T+ RG+ + ++ + ++ +A + I +G Sbjct: 328 DILHQKKMELNLNLKQIEKLSPIATILRGFGMVTSSSGHVVSNVDKIAIGDDLDIRVANG 387 Query: 493 QANAIVINKAPPKEQPTK 510 + VI+K ++ K Sbjct: 388 NIISKVISKQKDIKEKVK 405 >gi|237741998|ref|ZP_04572479.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 4_1_13] gi|229429646|gb|EEO39858.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 4_1_13] Length = 404 Score = 257 bits (656), Expect = 4e-66, Method: Composition-based stats. Identities = 122/376 (32%), Positives = 190/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ S+I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 L +I +EG + G + + ++Q+++ + G+L LEK K+K Sbjct: 61 NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E G F ++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + L N T++ R + +L+ +E + K F + I+++ I+ Sbjct: 295 LLRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQIKNKRID 370 Score = 72.1 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ K+E + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKRELL 295 Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + I L I + +++ + ++ L NTL Sbjct: 296 LRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ +IV K Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397 >gi|34763130|ref|ZP_00144099.1| Exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887193|gb|EAA24295.1| Exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 404 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 122/376 (32%), Positives = 190/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ S+I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 L +I +EG + G + + ++Q+++ + G+L LEK K+K Sbjct: 61 NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E G F ++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKEGLLEDLKAREIYITKLLKSYVDNMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + L N T++ R + +L+ +E + K F + I+++ I+ Sbjct: 295 LLRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQIKNKRID 370 Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 53/163 (32%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ K+E + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKEGLLEDLKAREIYITKLLKSYVDNMKRELL 295 Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + I L I + +++ + ++ L NTL Sbjct: 296 LRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ +IV K Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397 >gi|291557467|emb|CBL34584.1| exodeoxyribonuclease VII, large subunit [Eubacterium siraeum V10Sc8a] Length = 406 Score = 256 bits (655), Expect = 4e-66, Method: Composition-based stats. Identities = 117/359 (32%), Positives = 187/359 (52%), Gaps = 15/359 (4%) Query: 16 SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS+++ L IV + L+ + V GEIS + +SGH YF+LKD + I +++ G Sbjct: 8 TVSQVTRRLSMIVKGDKALNDLYVSGEISNFTLHKASGHMYFTLKDETASIKCVMFAGNA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F P G +V G + + QI + +I G G L A E+ K++L G F Sbjct: 68 RSLDFTPFSGQSVIVHGSVNVYERDGANQIYVTDMIERGQGELALAYEQAKRELEAGGYF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 K PIP PK + +IT+ GA ++D+L I+ R P+ V+ PV VQG P + Sbjct: 128 --NKKRPIPKQPKKVCLITAEKGAALQDMLNIIARRRPILEVVFIPVTVQGAYAPSTLIK 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ D+II+ RGGGS EDL FND +A+ NS IP ISA+GHETD Sbjct: 186 ALALA-------QSTGSDLIIIGRGGGSAEDLSCFNDVGYAKALYNSEIPTISAVGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL-EARLNNIIIRLIKYKINTLNSLL 311 +T++D+ AD RAPTP+ AAE+A V S I L RL+NII ++S+ Sbjct: 239 FTISDFVADFRAPTPSAAAEIATAVTCDDLSEHIELVYDRLSNIIHSKTDSYEQLIDSIQ 298 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + Q + S L + ++ + +I + ++ ++I++ I+ +++ Sbjct: 299 RHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 1/107 (0%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 H+ RI + + +I I + + +++ + N LKR Sbjct: 298 QRHISAYSPGQRIERSERELVLISGKIRTATDAVITKNSVLLDNYSDKIEALSPINVLKR 357 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 GY+++ NNN + ++ + I F DG A A + ++ Sbjct: 358 GYSAVT-KNNNAVNSIGDIEQNDTVEIIFADGTATAQIKEIHENNKE 403 >gi|153951694|ref|YP_001398624.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. doylei 269.97] gi|166232349|sp|A7H544|EX7L_CAMJD RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|152939140|gb|ABS43881.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 387 Score = 256 bits (654), Expect = 7e-66, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 180/349 (51%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VSEL+ +K ++ES ++ + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TVSELNLKVKALLESYFENIILSGEISKIT-LHGSGHWYFDLKDEKSSISCAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ + S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPAVGDFLELCGSVSLYAESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 + K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ P + A Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LRKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ +D RAPTP+ A + K ++ SL +E +L + ++ N L +L K Sbjct: 234 VISDFVSDFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLIQLWNHKMQNYENLLLNLSKF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342 >gi|291531065|emb|CBK96650.1| exodeoxyribonuclease VII, large subunit [Eubacterium siraeum 70/3] Length = 406 Score = 256 bits (653), Expect = 7e-66, Method: Composition-based stats. Identities = 117/359 (32%), Positives = 187/359 (52%), Gaps = 15/359 (4%) Query: 16 SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +VS+++ L IV + L+ + V GEIS + +SGH YF+LKD + I +++ G Sbjct: 8 TVSQVTRRLSMIVKGDKALNDLYVSGEISNFTLHKASGHMYFTLKDETASIKCVMFAGNA 67 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++F P G +V G + + QI + +I G G L A EK K++L G F Sbjct: 68 RSLDFTPYSGQSVIVHGSVNVYERDGANQIYVTDMIERGQGELALAYEKAKRELEAGGYF 127 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 K PIP PK + +IT+ GA ++D+L I+ R P+ V+ PV VQG P + Sbjct: 128 --NKKRPIPKQPKKVCLITAEKGAALQDMLNIIARRRPILEVVFIPVTVQGAYAPSTLIK 185 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ D+II+ RGGGS EDL FND +A+ NS IP ISA+GHETD Sbjct: 186 ALALA-------QSTGSDLIIIGRGGGSAEDLSCFNDVGYAKALYNSEIPTISAVGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL-EARLNNIIIRLIKYKINTLNSLL 311 +T++D+ AD RAPTP+ AAE+A V S I L RL++II ++S+ Sbjct: 239 FTISDFVADFRAPTPSAAAEIATAVTCDDLSEHIELVYDRLSDIIHSKTDSYEQLIDSIQ 298 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + Q + S L + ++ + +I + ++ ++I++ I+ +++ Sbjct: 299 RHISAYSPGQRIERSERELVLISGKIRTATDAVITKSSVLLDNYSDKIEALSPINVLKR 357 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 1/108 (0%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 H+ RI + + +I I + + +++ + N LKR Sbjct: 298 QRHISAYSPGQRIERSERELVLISGKIRTATDAVITKSSVLLDNYSDKIEALSPINVLKR 357 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 GY+++ NN+ + ++ + I F DG A A + ++ Sbjct: 358 GYSAVT-KNNSAVNSIGDIEQNDTVEILFADGTATAQIKEIHENNKER 404 >gi|255263778|ref|ZP_05343120.1| exodeoxyribonuclease VII, large subunit [Thalassiobium sp. R2A62] gi|255106113|gb|EET48787.1| exodeoxyribonuclease VII, large subunit [Thalassiobium sp. R2A62] Length = 424 Score = 256 bits (653), Expect = 8e-66, Method: Composition-based stats. Identities = 142/431 (32%), Positives = 213/431 (49%), Gaps = 14/431 (3%) Query: 98 SSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGA 157 SK+ + + L +G G + LEKRKK L EGLF + K P+P++P II V+TS G Sbjct: 7 QSKFSLNAQRLSVAGEGAFMALLEKRKKMLAAEGLFDEGRKKPLPYLPDIIGVVTSTQGV 66 Query: 158 VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG 217 VIRDIL R+ RFP +V+++PV VQG ++A AI N L G PRPD+II+ARG Sbjct: 67 VIRDILHRLRDRFPRKVLVWPVAVQGQSSKDQVAAAIAGFNALTPGGALPRPDLIIVARG 126 Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPV 277 GGSIEDLW FN+E++ RA A S IP+ISA+GHETD TL D+ +D RAPTPT AAE+AVPV Sbjct: 127 GGSIEDLWSFNEEVVARAAAASDIPLISAVGHETDTTLIDFVSDKRAPTPTAAAELAVPV 186 Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 + L + + EARL + + + + L L +ALPN + L+ R R D + + Sbjct: 187 RLDLLAWVSEQEARLKRALSQGVAQREQRLRDLARALPNLESLLANPRQRYDITSQRMTD 246 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 L K + ++ L + Q R+ + + + + + + L Sbjct: 247 ALLRAAQLKRQKLTETSGALRPSVLTNRTQNERRRVNDLGRQLAPSLARTLTRPTDRLSN 306 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 A L ++ + +L R +++++ + R+ S YK T Sbjct: 307 LAARLTT--RNPSAQLDRQRADLDRLSQRFATRGQNQLETARQKLDALERVRNSVGYKQT 364 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 LKRGY ++ + +T + + + I F DG + Sbjct: 365 LKRGYAVVRG-DGAPVTTAKAAKAASSLEIEFQDGTV-----------SPSGASSKPAKK 412 Query: 518 KREKQGTQGEL 528 + + QG L Sbjct: 413 PKPEPPEQGSL 423 >gi|309806413|ref|ZP_07700422.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LactinV 03V1-b] gi|308167195|gb|EFO69365.1| exodeoxyribonuclease VII, large subunit [Lactobacillus iners LactinV 03V1-b] Length = 375 Score = 255 bits (652), Expect = 1e-65, Method: Composition-based stats. Identities = 121/356 (33%), Positives = 190/356 (53%), Gaps = 9/356 (2%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 + V ++GE+S +R +S YFSLKD S+I+A+++K K++F EG++ V G Sbjct: 1 MHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAVMYKSFFEKVKFKLVEGMKVYVSGY 59 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 I + YQ + ++ P+G G L L + ++KL +EGLF+D HK IP P IAV+ Sbjct: 60 IDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKLDKEGLFADSHKKKIPKFPDKIAVV 119 Query: 152 TSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 TS +GAVI DI+ + RFP + + +FP VQG + I ++ Q+ + + D Sbjct: 120 TSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDAAASIIASLQQIAA-----SQDKYD 174 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 ++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS++GHETD TL+D AD RA TPT A Sbjct: 175 VVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISSVGHETDTTLSDLVADKRAATPTAA 234 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRL 328 AE A P + +I L L I +I N L + L Sbjct: 235 AEYATPELSAITLQIIELRTHLYAAIRSIINSDKILFNRTKNSVFLREPQRFYDEKMQTL 294 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 D L ++LE + + + + S I+ + Q ++ K Q++ + + Sbjct: 295 DLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQIIKHHYQELIFKTQNLNKSM 350 >gi|19704401|ref|NP_603963.1| exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328246|ref|ZP_06870776.1| exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|22095661|sp|Q8REN3|EX7L_FUSNN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|19714657|gb|AAL95262.1| Exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154646|gb|EFG95433.1| exodeoxyribonuclease VII large subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 404 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 125/376 (33%), Positives = 190/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ S+I + + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCVAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 L +I +EG + G + + +Q++ + G+L LEK K+KL Sbjct: 61 NYKLKRIPEDLKEGDLVKLFGDVGFYEARGDFQVLARYIEKQNALGSLYAKLEKVKEKLT 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 G F+++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 GLGYFNEEHKKDLPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN +KE D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIKE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDSMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L N T++ R + +L+ +E I +K F + I++I I+ Sbjct: 295 LLRIENYYLKNFPNTVNSLRESIVEKEIQLKEAMESFIEQKRNIFENKIDKISVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQVKNKRID 370 Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 55/163 (33%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ K+E + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDSMKRELL 295 Query: 400 AIL-HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + N + L I + +++ + I+ + NTL Sbjct: 296 LRIENYYLKNFPNTVNSLRESIVEKEIQLKEAMESFIEQKRNIFENKIDKISVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ ++V K Sbjct: 356 KRGYTVSQVKNKR-IDVLDDIEINDEMMTILKDGKVISVVKEK 397 >gi|260494676|ref|ZP_05814806.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_33] gi|260197838|gb|EEW95355.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_33] Length = 404 Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats. Identities = 123/376 (32%), Positives = 192/376 (51%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ S+I + + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCVAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLL 128 L +I +EG + G + + ++Q+++ + G+L LEK K+KL Sbjct: 61 NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNTLGSLYAKLEKVKEKLS 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E G F ++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 ELGYFDEKHKRDLPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E+++P KE+L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSIPEKENLLEDLKAREIYITKLLKSYVDNMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L N T++ R + +L+ +E + +K F I++I I+ Sbjct: 295 LLRVENYHLKNFPSTINNLRESIVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQIKNKRID 370 Score = 67.5 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ K+E + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSIPEKENLLEDLKAREIYITKLLKSYVDNMKRELL 295 Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + I L I + +++ I+ + + NTL Sbjct: 296 LRVENYHLKNFPSTINNLRESIVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ +IV K Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397 >gi|317050954|ref|YP_004112070.1| exodeoxyribonuclease VII large subunit [Desulfurispirillum indicum S5] gi|316946038|gb|ADU65514.1| exodeoxyribonuclease VII, large subunit [Desulfurispirillum indicum S5] Length = 469 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 115/525 (21%), Positives = 200/525 (38%), Gaps = 62/525 (11%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M P + S YSV ++ ++ ++ VRGE+ G + GH Y +LK+ Sbjct: 1 MLPSVESTS----VYSVCAFLTRVRFGLKREFRNIRVRGEVFACNGSAA-GHLYITLKEG 55 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + ++ + + G G + + +S +Q++ + G G L A Sbjct: 56 NESLQVAYFRNHHHGLA-KISRGDLVECQGYVDIY--NSTFQMVASRVEVQGDGRLFEAF 112 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPV 179 K K +L ++G F HK IP P+ IA+ITS +GA ++DIL S + L + I V Sbjct: 113 AKLKAELEKKGYFDKIHKKAIPAFPQRIALITSESGAALQDILSTASDVLYCLDITIHHV 172 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +I AI D+++L RGGGS DL FN + I AI S Sbjct: 173 SVQGQVAVGQICEAIA-------AAQSADYDLLVLCRGGGSALDLQPFNSQEIAEAIFRS 225 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P+ISA+GHETD ++ D ADLR TPT + ++ RL R+ Sbjct: 226 RLPVISAVGHETDLSICDLVADLRVETPTAFGHLLATP-------FRQIQERLRRAQQRM 278 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + N L L +R R++ L + R + ++ Sbjct: 279 TWLQQNQLTRNTAIL--------------ERHERDITLALRRTLDRSTFGLESLSAKLDK 324 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L + +Q H+ ++ ++R+ +L Sbjct: 325 I-LERRVTHLQQKTEYLGNHLHRL------------------------SPQSRVEHLEHQ 359 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 L R+E + + + +L++ + + L+RGY+ + + R+L Sbjct: 360 CSLLRHRLENRMQASLDISQHRLGRCCDLLETLSPRKVLQRGYSVLLQADGTVAHNARDL 419 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524 + G + + + Q K +K+ Sbjct: 420 HPGEPLTGILHRGTLKLTITHILEDTDGSNSHDQNRPGKSQKRAG 464 >gi|256845338|ref|ZP_05550796.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_36A2] gi|256718897|gb|EEU32452.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_36A2] Length = 404 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 121/376 (32%), Positives = 189/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ S+I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 L +I +EG + G + + ++Q+++ + G+L LEK K+K Sbjct: 61 NYKLKRIPEDLKEGDLIKLFGDVGFYEIRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E G F ++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L N T++ R + +L+ ++E + K F + I+++ I+ Sbjct: 295 LLRVENYHFKNFPSTINNLRESIVEKEIQLKESMESFLEHKRNIFENKIDKLSVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQIKNKRID 370 Score = 70.6 bits (171), Expect = 7e-10, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ K+E + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKRELL 295 Query: 400 AILHMLR-EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + I L I + +++ + ++ L NTL Sbjct: 296 LRVENYHFKNFPSTINNLRESIVEKEIQLKESMESFLEHKRNIFENKIDKLSVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ +IV K Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397 >gi|226227275|ref|YP_002761381.1| exodeoxyribonuclease VII large subunit [Gemmatimonas aurantiaca T-27] gi|226090466|dbj|BAH38911.1| exodeoxyribonuclease VII large subunit [Gemmatimonas aurantiaca T-27] Length = 396 Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats. Identities = 109/325 (33%), Positives = 176/325 (54%), Gaps = 8/325 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 SV +L+ K ++E + VRGE++ ++ H +GH YFSL+D +++++ +IW + Sbjct: 14 SVHDLTSAAKDLIEGAFPPLWVRGEVTNFKA-HRNGHWYFSLRDANAQVNCVIWSSATRR 72 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 I P+EG++ L +G++T +P Q + L G G ALE+ + +L +GL + Sbjct: 73 IPAQPDEGMQVLALGQMTVWPVRGDLQFSVRQLEAEGDGLWRKALEQSRLRLERDGLLTA 132 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIANAI 194 + K +P P+ IAVITSP GA +RD++ R + +++ P KVQG+ + +A+ Sbjct: 133 ERKRRLPAFPRRIAVITSPDGAALRDVITVSRARSADVELVVVPAKVQGEGAADSLIDAL 192 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 ++ D++I+ RGGGS EDLW FNDE + RA+A +P ISA+GHE D + Sbjct: 193 ERV------GRWGGADLVIIGRGGGSREDLWAFNDERLARALAACPVPTISAVGHEVDIS 246 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D AD+RA TP+ AAE+AVP + L + + L RL + +R + +L + K L Sbjct: 247 LCDLVADVRAATPSAAAEIAVPSRRELAARVDALGNRLASAAVRRQDRAVASLVQVRKRL 306 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNL 339 + L R L Sbjct: 307 ALTATRLVDRRRGRIETLAGQLEAL 331 Score = 83.3 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 39/134 (29%) Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + + A+ + L R + ++ R+ + + Sbjct: 261 AAAEIAVPSRRELAARVDALGNRLASAAVRRQDRAVASLVQVRKRLALTATRLVDRRRGR 320 Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + L++ + TL RG+ + + ++++ A + DG A Sbjct: 321 IETLAGQLEALSPLATLARGFGVARGPDGATLSRRAQFAPGASFELWLQDGIVEATAGAS 380 Query: 502 APPKEQPTKKCQLH 515 ++ ++ Sbjct: 381 KALPDERMERTNRE 394 >gi|221066471|ref|ZP_03542576.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni KF-1] gi|220711494|gb|EED66862.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni KF-1] Length = 445 Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats. Identities = 114/391 (29%), Positives = 203/391 (51%), Gaps = 15/391 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + V L + + +++ + V VRGE+SG+ +SGH YF+LKD +I Sbjct: 5 SNPAATQHVWEVGALCHAIGDALQARFNPVSVRGELSGF-SRAASGHCYFNLKDASGQIR 63 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 +++ ++ F +G V G++ + Q+++ES+ +G G L + K Sbjct: 64 CAMFRRAAEQVGFSARDGELVEVRGRLGVYEQRGDLQLVVESMQRAGQGALFEQFLRLKA 123 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGD 184 +L EGLF K P+P +P+ I ++TS A + D++ + R + V++ P VQG Sbjct: 124 QLESEGLFDPARKRPLPPLPRGIGLVTSLGAAALHDVVTALRRRVPHIPVVVVPALVQGA 183 Query: 185 ECPKEIANAILQLNTLKEGRT------------CPRPDIIILARGGGSIEDLWHFNDEMI 232 + P+ + A+ +L L + P D I+L RGGGS+EDLW FNDE + Sbjct: 184 QAPQSLVQALSKLYRLAQEGQGPSSNLPADSARQPVIDTILLVRGGGSLEDLWAFNDEQL 243 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 R I S +P+IS +GHETD+T+AD+ ADLRAPTPT AAE+ +E +L ++ RL Sbjct: 244 ARTIVQSPVPLISGVGHETDFTIADFCADLRAPTPTAAAELVAQPREVWLGALGLMQDRL 303 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 +N + R++ + L+ + L + L+ ++ +L+R + L H + + + R ++ Sbjct: 304 DNAVQRVMDRQAQRLDIAAQRLGRPSEQLTRNQLQLNRQAQRLRHAMLLKLQRLAQNQQA 363 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 + S F N+++ +Q + ++ + Sbjct: 364 LQVNFSSIF-QRNLEQQKQTLDRIDLRLQLL 393 Score = 96.0 bits (237), Expect = 2e-17, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 4/148 (2%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 ++ + + + + Q + Q + + +Q R ++ LR + Sbjct: 298 LMQDRLDNAVQRVMDRQAQRLDIAAQRLGRPSEQLTRNQLQLNRQ----AQRLRHAMLLK 353 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + L + + L I ++ ++ LQ + L+RGY + D Sbjct: 354 LQRLAQNQQALQVNFSSIFQRNLEQQKQTLDRIDLRLQLLDPRLVLQRGYALLTDEQGRA 413 Query: 473 ITQKRNLATKTRILINFFDGQANAIVIN 500 +TQ R + DG + +V Sbjct: 414 VTQVRQAVPGAALKAQLSDGAVDVVVTQ 441 >gi|315638798|ref|ZP_07893970.1| exodeoxyribonuclease VII large subunit [Campylobacter upsaliensis JV21] gi|315481016|gb|EFU71648.1| exodeoxyribonuclease VII large subunit [Campylobacter upsaliensis JV21] Length = 387 Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats. Identities = 118/349 (33%), Positives = 187/349 (53%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VSEL+ K ++ES+ ++ V GE+S HSSGH YF LKD S I +++KG K Sbjct: 2 TVSELNLSAKALLESHFDNIFVSGELSKITM-HSSGHWYFELKDQCSSIACVMFKGNNFK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P+ G + G ++ + S +YQ I +S+ G G L K+ L +EGLF + Sbjct: 61 LGFEPKIGDFLELEGNLSLYAESGRYQFIAKSMKKEGFGDLEARFLALKESLQKEGLFDE 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 HK +P P I +ITS T A + D+L+ I+ + F ++ +F QG P + A Sbjct: 121 IHKKNLPKFPLKIGIITSFTSAALEDMLKIITQKAYFLAKIYVFNALTQGQNAPFSLIKA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE++ R I + PIISAIGHE D+ Sbjct: 181 LKKADAI-------GLDVLIMARGGGSREDLFCFNDEVLAREIFAAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ ADLRAPTP+ A + +P KE L+ L +E +L + + K N L++L K Sbjct: 234 VISDFVADLRAPTPSAAINILLPSKEDLEQKLDFIEDKLKTSFMIICKNLENKLSNLEKI 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L+ L ++L+ ++ I + F + N Sbjct: 294 FKANSLPLMIEQKIKHLESLKKQLDLLIKNKIQISFLEFEKLKNAYLQH 342 >gi|237744894|ref|ZP_04575375.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 7_1] gi|229432123|gb|EEO42335.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 7_1] Length = 404 Score = 253 bits (647), Expect = 4e-65, Method: Composition-based stats. Identities = 124/376 (32%), Positives = 190/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ S+I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLL 128 L +I +EG + G + + ++Q+++ + G+L LEK K+KL Sbjct: 61 NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNTLGSLYAKLEKVKEKLS 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECP 187 E G F ++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 ELGYFDEKHKRDLPKFPKNIGVVTALTGAALQDIIKTTRKRFDSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L N T++ R + +L+ +E + +K F I++I I+ Sbjct: 295 LLRVENYHLKNFPNTINNLRESVVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQVKNKRID 370 Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 54/163 (33%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ K+E + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKRELL 295 Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + N I L + + +++ I+ + + NTL Sbjct: 296 LRVENYHLKNFPNTINNLRESVVEKEIQLKEIMESFLAQKRNIFETKIDKISVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ +IV K Sbjct: 356 KRGYTVSQVKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397 >gi|222824344|ref|YP_002575918.1| exodeoxyribonuclease VII, large subunit [Campylobacter lari RM2100] gi|254783693|sp|B9KDM8|EX7L_CAMLR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|222539565|gb|ACM64666.1| exodeoxyribonuclease VII, large subunit [Campylobacter lari RM2100] Length = 387 Score = 253 bits (646), Expect = 5e-65, Method: Composition-based stats. Identities = 117/348 (33%), Positives = 179/348 (51%), Gaps = 12/348 (3%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 VSEL+ K ++E +L + + GEIS IH SGH YF LKD S I +++KG + Sbjct: 3 VSELNLKAKSLLEFHLDDIELSGEISKIT-IHGSGHWYFDLKDEKSSIACVMFKGFNQFV 61 Query: 77 EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136 + P+ G + G ++ + S +YQ I +S+ + G L K+KL +EGLF Sbjct: 62 QTQPKVGDMLDLRGYVSLYEASGRYQFIAKSMQKTSLGDLEAKFLALKEKLEKEGLFDIN 121 Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANAI 194 K I PK I +ITS T A ++D+L+ IS + ++ IF QG P + NA+ Sbjct: 122 AKKSIVKFPKKIGIITSFTSAALQDMLKLISQKEYNLCKITIFNALTQGQSAPNSLINAL 181 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + N D IILARGGGS EDL+ FNDE + R I + P++SAIGHE D+ Sbjct: 182 KKANE-------YDLDAIILARGGGSREDLFCFNDEELARCIFSLKTPVVSAIGHEIDYV 234 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK-- 312 ++D+ ADLRAPTP+ A +M P K L+ L L R + ++ +K+ N ++ L Sbjct: 235 ISDFVADLRAPTPSAAIDMIFPNKLSLEQGLDELTMRFKSQMLNHLKFYQNKIDHLQNLA 294 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + +LD L +L+ L + + N+ + Sbjct: 295 KAKSLENAFFLRKQKLDFLQSQLKSVLNLKLLNYENKLNNFEELLAQH 342 >gi|294785363|ref|ZP_06750651.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_27] gi|294487077|gb|EFG34439.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 3_1_27] Length = 404 Score = 253 bits (645), Expect = 6e-65, Method: Composition-based stats. Identities = 121/376 (32%), Positives = 189/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ +I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKLQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 L +I +EG + G + + ++Q+++ + G+L LEK K+K Sbjct: 61 NYKLKRIPEDLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNALGSLYAKLEKVKEKFS 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E G F ++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 ELGYFDEEHKKELPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDFIIAGRGGGSIEDLWAFNEEDVAMAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKKEL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + L N T++ R + +L+ +E + K F + I+++ I+ Sbjct: 295 LLRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQIKNKRID 370 Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ KKE + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLEDLKAREIYITKLLKSYVDNMKKELL 295 Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + I L I + +++ + ++ L NTL Sbjct: 296 LRAENYHLKNFPSTINNLRESIVEKEIQLKEAMESFLEHKRNIFENKIDKLSVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ +IV K Sbjct: 356 KRGYTVSQIKNKR-IDVLDDIEINDEMVTILKDGKVISIVKEK 397 >gi|257140030|ref|ZP_05588292.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis E264] Length = 393 Score = 253 bits (645), Expect = 7e-65, Method: Composition-based stats. Identities = 113/442 (25%), Positives = 198/442 (44%), Gaps = 57/442 (12%) Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + ++++G EF P EG + V +T + + Q+ +E++ +G G L A + Sbjct: 1 MRCVMFRGRAQHAEFTPREGDKIEVRALVTMYEPRGEVQLNVEAVRRTGQGRLYEAFLRL 60 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K +L EGLF+ + K +P P+ I V+TS A +RD+L ++ R P + VI++P VQ Sbjct: 61 KAQLEAEGLFAPERKRALPTHPRAIGVVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQ 120 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G +++A + + +E D++I+ RGGGSIEDLW FNDE + RAIA S +P Sbjct: 121 GAGAAEKLAAMVATASARRE------VDVLIVCRGGGSIEDLWSFNDEALARAIAASEVP 174 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++ +GHETD+T+AD+AAD+RAPTPTGAAE+ P + L L + L + R + Sbjct: 175 VVCGVGHETDFTIADFAADVRAPTPTGAAELVSPQRALLLRELGERQNALARGLRRGLDA 234 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L+ L + L + + L + +L L + F + R + Sbjct: 235 RAQQLDWLARRLISPAERLQRQSMHVGQLAARLAAAGARPVRDARARFALVQLRWQRARP 294 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 ++ RQ + Q ++ +++ Sbjct: 295 --DVAPARQVLATLAQRLDATLRRR----------------------------------- 317 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQKRNLAT 481 ++ V+ L+ + + TL+RGY I + L Sbjct: 318 ------------VERDTARVAACAARLEVLSPQRTLERGYAALIDTQTGRAVRAPAALKP 365 Query: 482 KTRILINFFDGQANAIVINKAP 503 + R+ ++ +G A+ + + P Sbjct: 366 QRRLTVHLAEGSADVSLADVQP 387 >gi|310778325|ref|YP_003966658.1| exodeoxyribonuclease VII, large subunit [Ilyobacter polytropus DSM 2926] gi|309747648|gb|ADO82310.1| exodeoxyribonuclease VII, large subunit [Ilyobacter polytropus DSM 2926] Length = 406 Score = 253 bits (645), Expect = 8e-65, Method: Composition-based stats. Identities = 125/365 (34%), Positives = 194/365 (53%), Gaps = 13/365 (3%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 ++ Y+VS+ + +K +E N L + ++GEISG + SGH YFSLKD + ++ Sbjct: 1 MEDRIYTVSQFNKMVKDYLEDNNNLKNFFLKGEISGVN-YYKSGHLYFSLKDKNCQVRCT 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126 + KI +EG + G T + +QI++ L G L LEK KK+ Sbjct: 60 AFGYRYKKIPEDLKEGDSVKIFGDATLYEARGDFQIMVRHLEKENKMGALYEELEKVKKE 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L E+G F K P+P +P+ I VITS TGA +RDI+ R+P + + ++P KVQG Sbjct: 120 LSEKGYFDRDKKRPMPSLPQTIGVITSGTGAAVRDIINTARLRYPNINIYVYPAKVQGLG 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 KE+ I LN ++E D+II RGGGSIEDLW FN++ + A NS PI+S Sbjct: 180 AAKEVIRGIEALNKIEE------IDLIIAGRGGGSIEDLWTFNEKDVALAYFNSKKPIVS 233 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D L D+ ADLR+ TPT A+EM VP K+ LQ S+ N E L + + + I K + Sbjct: 234 AVGHEIDVLLTDFTADLRSSTPTHASEMVVPEKKKLQESIENREKYLKSYLRKYIHKKKD 293 Query: 306 TLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 +++ + N + + + RE + E I +K + + ++K+ Sbjct: 294 EISNRRNSFVIKNFQRLVQEKNMEVLDKEREFIKSYERYILKKRQEMEMKVEKLKALNPD 353 Query: 364 HNIQK 368 + +++ Sbjct: 354 NILKR 358 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 49/162 (30%), Gaps = 6/162 (3%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE-- 407 ++S H + + Q+ IE K Y+ +K + R Sbjct: 243 LTDFTADLRSSTPTHASEMVVPEKKKLQESIENREKYLKSYLRKYIHKKKDEISNRRNSF 302 Query: 408 ---QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 + + + + I + + L++ N LKRGY+ Sbjct: 303 VIKNFQRLVQEKNMEVLDKEREFIKSYERYILKKRQEMEMKVEKLKALNPDNILKRGYSI 362 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 +N I ++ + F G++ ++V ++ Sbjct: 363 T-SSNGKVIKNAHDIEPGEILETIFHIGKSTSVVKEIDVDEK 403 >gi|219851193|ref|YP_002465625.1| exodeoxyribonuclease VII, large subunit [Methanosphaerula palustris E1-9c] gi|219545452|gb|ACL15902.1| exodeoxyribonuclease VII, large subunit [Methanosphaerula palustris E1-9c] Length = 419 Score = 252 bits (644), Expect = 9e-65, Method: Composition-based stats. Identities = 130/388 (33%), Positives = 203/388 (52%), Gaps = 16/388 (4%) Query: 15 YSVSELSYHLKHIV-ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH----SRIDAIIW 69 VSE+S ++ ++ + L + VRGEI+ Y HSSGH YFSL + S I +IW Sbjct: 22 LGVSEISGLIETLLGDQRLQEIWVRGEITNYTH-HSSGHRYFSLSEERFGKVSTIQCVIW 80 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + +I G+ + G I +P +YQ + +G G +E+ K++L Sbjct: 81 RSDAARIGIDLANGMNVQIFGSIGLYPPQGRYQFYAREVRRTGEGEKHLLVERWKRELDA 140 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189 EGLF+ + K P+P PK++ V+TS TGAV++DI IS RFPL +I+ P VQG+ E Sbjct: 141 EGLFAAERKRPLPRFPKVVGVVTSSTGAVLQDIRNVISRRFPLTLIVSPTVVQGETAHLE 200 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 IA AI +++T D+II+ARGGGS EDL+ FN +VRA+A P++SA+GH Sbjct: 201 IAAAIRRVDTR--------VDVIIVARGGGSFEDLFPFNHPDVVRAVAGCITPVVSAVGH 252 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D TL D AADLRAPTP+ AAE+ VP + L S L+ L + +IR ++ + + Sbjct: 253 EVDVTLCDLAADLRAPTPSAAAELVVPDRGELISELLTCRQHLIDHLIRRVQKGSTEVTT 312 Query: 310 LLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + L ++ ++ R L L L+ L + + R+ +++ + + Sbjct: 313 LRERLHPARLERLMNRRREDLATLSEWLDRALTVGMERRRLEVREQRAMVEAGDPLRLLN 372 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + Q I + L + Sbjct: 373 RGYCMVERENQPITSAHQISKGDQVLLR 400 Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 48/131 (36%), Gaps = 3/131 (2%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 +L +QH+ + + ++ E LH + + + + L ++ L Sbjct: 287 ELLTCRQHLIDHLIRRVQKGSTEVTTLRERLHP--ARLERLMNRRREDLATLSEWLDRAL 344 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 + ++ V ++++ L RGY ++ N IT ++ ++L+ D Sbjct: 345 TVGMERRRLEVREQRAMVEAGDPLRLLNRGYCMVEREN-QPITSAHQISKGDQVLLRLAD 403 Query: 492 GQANAIVINKA 502 G A + Sbjct: 404 GTGIAKIKEVT 414 >gi|294102023|ref|YP_003553881.1| exodeoxyribonuclease VII, large subunit [Aminobacterium colombiense DSM 12261] gi|293617003|gb|ADE57157.1| exodeoxyribonuclease VII, large subunit [Aminobacterium colombiense DSM 12261] Length = 418 Score = 252 bits (644), Expect = 9e-65, Method: Composition-based stats. Identities = 107/359 (29%), Positives = 188/359 (52%), Gaps = 11/359 (3%) Query: 9 SLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + P+ SV E++ ++ + + L ++ V GEI + H+SGH YF+L + R+ Sbjct: 3 GTNLPKLSVDEVTNRIQGLFFSDPVLQNLIVVGEIVEIK-KHTSGHVYFTLSGDEGRLSC 61 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +++K ++ P +G E G++ +P YQ+ + L P G G A E+ + + Sbjct: 62 VLFKNDAARVPEWPRKGDEVWAEGRVGVYPPRGSYQLYVRRLTPQGIGAAARAREELRLR 121 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L +EGLF + K +P P+ +AVITS TGA I+D+L+ RFP ++I P VQG + Sbjct: 122 LDKEGLFDPRLKRKLPAYPQKVAVITSSTGAAIKDVLKVSRNRFPQCSIVIVPCLVQGYD 181 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P+EI +A +Q+ R D ++L RGGGS +DL F+DE ++RAI + +P+I+ Sbjct: 182 APEEIFSAFVQI------RPLIDVDAVMLVRGGGSRDDLNPFDDERVIRAIRSCPVPVIT 235 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHETD TL+D AAD+ A TP+ AAE P L + + L+ + I+ K + Sbjct: 236 GVGHETDTTLSDLAADVAASTPSAAAERLFPDHIDLIRHVDFFSSSLSRTMQTDIRKKKD 295 Query: 306 TLNSLLK-ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + +S + + L R ++ ++ ++ + + + + + + + Sbjct: 296 NLAHFQQLMFTHSSRMVERGAKILQENKRHMDLLMKTLLEGRKQALSSVAGALNALSPL 354 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 62/168 (36%), Gaps = 4/168 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + + + ++ ++ +H++ R + + ++K L Sbjct: 239 HETDTTLSDLAADVAASTPSAAAERLFPDHIDLIRHVDFFSSSLSRTMQTDIRKKKDNLA 298 Query: 404 MLRE----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 ++ + + +++ ++ ++ ++ ++S L + + + L Sbjct: 299 HFQQLMFTHSSRMVERGAKILQENKRHMDLLMKTLLEGRKQALSSVAGALNALSPLSILG 358 Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 RG+ S +T L + +++++F DG++N V E+ Sbjct: 359 RGFISCTKEEGEVVTSVDQLEIREKLILSFIDGRSNVRVEKITKTGEK 406 >gi|116754609|ref|YP_843727.1| exodeoxyribonuclease VII, large subunit [Methanosaeta thermophila PT] gi|116666060|gb|ABK15087.1| Exodeoxyribonuclease VII large subunit [Methanosaeta thermophila PT] Length = 398 Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats. Identities = 122/359 (33%), Positives = 190/359 (52%), Gaps = 15/359 (4%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSVSEL ++ + + L V GE+S HSSGH YF+LKD+ ++I +++K Sbjct: 5 YSVSELCTRIQERITGDVRLHDVWACGELSNVVN-HSSGHRYFTLKDSEAQISCVMFKRH 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEG 131 +++F+ G+ V G + + G Q+ + S+ P G G LE +++L EG Sbjct: 64 AEELDFVLRNGMNVRVFGDVGFYKGRGNVQLQVRSISPDTGIGRSAMELESLRRRLTAEG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIA 191 LFS + K P+P P+ I ++TS GA +RD+++ + R+P R+I+ P VQGD + + Sbjct: 124 LFSPERKRPLPRYPERIGIVTSMDGAALRDVIRSLG-RYPARIILSPATVQGDAAAQSMI 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 +A+ L R D+IIL RGGGS EDL FND + RAIA S P+ISA+GHE Sbjct: 183 SALRAL--------RGRADVIILCRGGGSAEDLSPFNDVHLARAIAESDAPVISAVGHEV 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T+AD AD RA TPT AA++AVP ++ L N+E ++ I ++ + L+ L Sbjct: 235 DVTVADLVADARASTPTAAAKLAVPDVREIEQLLRNMEDQMTWAIDSHLERIRSRLDYLS 294 Query: 312 KALPNSDQ--TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + L + RL + R L I+ + R R+ S + + + Sbjct: 295 RGIEARKMYAILEMRKLRLRDISRRLLDAERSIVDSRARRLEIARARLDSASPLAVLSR 353 Score = 79.4 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 5/137 (3%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM--LREQTKNRIFYLHTHIKKLITRIE 428 + I + +++E + + + ++ L + + ++ + R+ Sbjct: 262 REIEQLLRNMEDQMTWAIDSHLERIRSRLDYLSRGIEARKMYAILEMRKLRLRDISRRLL 321 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + S + I L S + L RGYT + + + +LA I + Sbjct: 322 DAERSIVDSRARRLEIARARLDSASPLAVLSRGYTMVVGSAG-VVCHAVDLAVGEEIRLV 380 Query: 489 FFDGQANAIV--INKAP 503 F DG+A V I P Sbjct: 381 FSDGEACCNVNKIEIKP 397 >gi|221206583|ref|ZP_03579595.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD2] gi|221173238|gb|EEE05673.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD2] Length = 251 Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats. Identities = 85/254 (33%), Positives = 143/254 (56%), Gaps = 10/254 (3%) Query: 2 NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 +PF+ + VS L+ + ++E + + + GE+S + +SGH YFS+KD Sbjct: 5 SPFAAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +++ ++++G EF+P EG V +T + + Q+ +E++ +G G L A Sbjct: 64 QQAQMRCVMFRGRAQYAEFMPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 + K +L EGLF+ + K P+P P+ I ++TS A +RD+L ++ R P + VI++P Sbjct: 124 FLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYP 183 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG + + A+ N +E D++++ RGGGSIEDLW FNDE + RAIA Sbjct: 184 APVQGAGAAERLVAAVQTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAIAA 237 Query: 239 SSIPIISAIGHETD 252 S +P++ +GHETD Sbjct: 238 SELPVVCGVGHETD 251 >gi|57506041|ref|ZP_00371964.1| exodeoxyribonuclease VII, large subunit [Campylobacter upsaliensis RM3195] gi|57015649|gb|EAL52440.1| exodeoxyribonuclease VII, large subunit [Campylobacter upsaliensis RM3195] Length = 387 Score = 251 bits (642), Expect = 2e-64, Method: Composition-based stats. Identities = 117/349 (33%), Positives = 186/349 (53%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 +VSEL+ K ++ES+ ++ V GE+S HSSGH YF LKD S I +++KG K Sbjct: 2 TVSELNLSAKALLESHFDNIFVSGELSKITM-HSSGHWYFELKDQCSSIACVMFKGNNFK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P+ G + G ++ + S +YQ I +S+ G G L K+ L +EGLF + Sbjct: 61 LGFEPKIGDFLELEGNLSLYAESGRYQFIAKSMKKEGFGDLEARFLALKESLQKEGLFDE 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 HK +P P I +I S T A + D+L+ I+ + F ++ +F QG P + A Sbjct: 121 IHKKNLPKFPLKIGIIASFTSAALEDMLKIITQKAYFLAKIYVFNALTQGQNAPFSLIKA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE++ R I + PIISAIGHE D+ Sbjct: 181 LKKADAI-------GLDVLIMARGGGSREDLFCFNDEVLAREIFAAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ ADLRAPTP+ A + +P KE L+ L +E +L + + K N L++L K Sbjct: 234 VISDFVADLRAPTPSAAINILLPSKEDLEQKLDFIEDKLKTSFMIICKNLENKLSNLEKI 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L+ L ++L+ ++ I + F + N Sbjct: 294 FKANSLPLMIEQKIKYLESLKKQLDLLIKNKIQISFLEFEKLKNAYLQH 342 >gi|72384795|gb|AAZ67689.1| probable exodeoxyribonuclease VII large subunit [Haemophilus parasuis 29755] Length = 352 Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats. Identities = 126/356 (35%), Positives = 187/356 (52%), Gaps = 10/356 (2%) Query: 47 IHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106 HSSGH YF++KD S I A+++KG +K+ F P+EG E L+ +++ + YQI + Sbjct: 3 KHSSGHLYFNVKDKESVISAMMFKGNASKLGFEPKEGDEVLIEARVSVYERRGNYQIYVN 62 Query: 107 SLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166 + G G L LE KKKL +EG F +K IP PK IAV+T+ TGA IRDI I Sbjct: 63 KMQLDGIGNLYQKLELLKKKLKKEGYFDQSNKKLIPKYPKKIAVLTASTGAAIRDIHSTI 122 Query: 167 SCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 + R+P + I VQG + ++I I ++L D II+ RGGGSIEDLW Sbjct: 123 NNRYPLVEQIQISTLVQGTQARQDIIEKIQYADSL-------DVDTIIVGRGGGSIEDLW 175 Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285 +FN+E +V+ I N PIISA+GHETD+TL+D+ AD+RA TPT AA +A P + L + Sbjct: 176 NFNEEDVVKTIFNCQTPIISAVGHETDFTLSDFVADVRAATPTQAAVIATPDQYELLQQI 235 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 E L+ I + I+++ LN + + D L R+L H L + Sbjct: 236 KQYEYTLSRYIKQYIEHQKKQLNHISSYYKFKQPSLLYDQQIQKRDELERQLNHLLNTKV 295 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + H + L I + +Q I + + +I+ ++ + K K+ Sbjct: 296 EKSKHHLKLLQQSFNFKNLNQQITQEKQSIYQLHSRLSKIMSNNITNLKTVLKNKL 351 >gi|307243214|ref|ZP_07525385.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus stomatis DSM 17678] gi|306493342|gb|EFM65324.1| exodeoxyribonuclease VII, large subunit [Peptostreptococcus stomatis DSM 17678] Length = 401 Score = 251 bits (640), Expect = 2e-64, Method: Composition-based stats. Identities = 123/317 (38%), Positives = 179/317 (56%), Gaps = 11/317 (3%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + VSE++ ++K + + L+ V VRGEIS ++ IHSSGH Y +LKDN S+I + Sbjct: 1 MKIRVLEVSEVNEYIKKVFLDDPILNSVKVRGEISNFK-IHSSGHVYLTLKDNKSKIRCM 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 I++ NK + + G + + G I+ + YQ+ ++++ G G L K K+KL Sbjct: 60 IYRSDYNK-DLELDNGSKIVADGYISNYVSDGSYQLYMKNVSLEGVGNLYLDFLKLKEKL 118 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EGLFS+ +K PIP PK I V+TS TGAVIRDI+ IS R+P + + ++P VQG + Sbjct: 119 DKEGLFSNYYKKPIPRFPKSIGVVTSETGAVIRDIINVISRRYPKVAIKLYPALVQGKDS 178 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + I N D II+ RGGGS+E+LW FNDE + RAI SSIP+ISA Sbjct: 179 VSSLIAGINFFNLEYP------VDTIIIGRGGGSLEELWSFNDEDLARAIFASSIPVISA 232 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GHETD+T+ D+ +D RAPTP+ AAE+A P L + R+ N I I + + Sbjct: 233 VGHETDFTICDFVSDERAPTPSAAAEIATPNLADLLREQDLMAKRMTNSINNRIILEKHR 292 Query: 307 LNSLLKALPNSDQTLSC 323 L S + Sbjct: 293 LRSSMDRFSQYADRYML 309 Score = 80.2 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 56/137 (40%), Gaps = 3/137 (2%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR--IFYLHTHIKKLITRIEF 429 +L +Q + + + + + +K ++ Q +R + + + ++ +I+ Sbjct: 266 DLLREQDLMAKRMTNSINNRIILEKHRLRSSMDRFSQYADRYMLGDRYIALDMILDKIDS 325 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + I++ +++ + S + RGY+ + ++ R++ ++ IN Sbjct: 326 SFTKYIQNKREEMNLYGVKMSSLNPFSIFDRGYSIAE-KEGRIVSTIRDIDQGDKLKINL 384 Query: 490 FDGQANAIVINKAPPKE 506 DG+ + V++ + Sbjct: 385 KDGKLDCQVVDIEANDK 401 >gi|86148929|ref|ZP_01067161.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597304|ref|ZP_01100539.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|218561984|ref|YP_002343763.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|14194732|sp|Q9PIH4|EX7L_CAMJE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|85840287|gb|EAQ57544.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190365|gb|EAQ94339.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112359690|emb|CAL34476.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925597|gb|ADC27949.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni IA3902] Length = 387 Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ K ++E++ + + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKAKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 + K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ P + A Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K ++ SL +E +L + I+ N L +L K Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNYKIQNYENLLLNLSKF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342 >gi|253583760|ref|ZP_04860958.1| exodeoxyribonuclease VII large subunit [Fusobacterium varium ATCC 27725] gi|251834332|gb|EES62895.1| exodeoxyribonuclease VII large subunit [Fusobacterium varium ATCC 27725] Length = 406 Score = 249 bits (636), Expect = 8e-64, Method: Composition-based stats. Identities = 114/360 (31%), Positives = 186/360 (51%), Gaps = 13/360 (3%) Query: 15 YSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSVSE + +K+ +E S+L + GE+SG + SGH YF+LKD +++ +K Sbjct: 7 YSVSEFNRKVKNYLEENSDLREFFLEGEMSGVT-YYKSGHLYFNLKDKDAQVKCAAFKYK 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-GTLLTALEKRKKKLLEEG 131 +I ++G + G + + +QI++ + G L LEK KK++ ++G Sbjct: 66 FKRIPEDLKDGDSVKIFGDVGFYENRGDFQILVRHIEKKNELGELFAKLEKLKKEMADQG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 F HK P+P PK I V+T+ TGA I+DI++ I R + + ++P KVQG +EI Sbjct: 126 YFDHSHKKPLPKFPKNIGVVTAYTGAAIQDIIKTIKKRDVTINIYVYPAKVQGIGAKEEI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I LN +++ D+II RGGGSIEDLW FN++ + A NS PIISA+GHE Sbjct: 186 VKGIKTLNKIED------IDLIIAGRGGGSIEDLWSFNEKEVALAFYNSEKPIISAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+ L+D AD RA TPT A E++VP ++ S+ + L +++ I+ L Sbjct: 240 IDYLLSDLTADARAATPTQAIELSVPERKKTLESIEDRSRYLKSLMKNYIEILKRELEKR 299 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N + + + L+ E I + N+ +N+I + + +++ Sbjct: 300 ENNYYIKNFSRNIEEKNQEIIEKEHLLKKAFEHHIQNLQNNLNNRVNKIINLNPLETLKR 359 Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 60/141 (42%), Gaps = 3/141 (2%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +K + I ++ ++++ ++K ++ + E +++ ++ + I + I + Sbjct: 268 KKTLESIEDRSRYLKSLMKNYIEILKRELEKRENNYYI--KNFSRNIEEKNQEIIEKEHL 325 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ H I++ +++ + + TLKRGY+ I N I + +L+ I Sbjct: 326 LKKAFEHHIQNLQNNLNNRVNKIINLNPLETLKRGYSVI-SKNGTSIKKVSDLSINDEID 384 Query: 487 INFFDGQANAIVINKAPPKEQ 507 I DG IV K+ Sbjct: 385 IKMTDGLIKGIVKEIKNEKDT 405 >gi|57168464|ref|ZP_00367598.1| exodeoxyribonuclease VII, large subunit [Campylobacter coli RM2228] gi|305432883|ref|ZP_07402041.1| exodeoxyribonuclease VII large subunit [Campylobacter coli JV20] gi|57020272|gb|EAL56946.1| exodeoxyribonuclease VII, large subunit [Campylobacter coli RM2228] gi|304444037|gb|EFM36692.1| exodeoxyribonuclease VII large subunit [Campylobacter coli JV20] Length = 387 Score = 249 bits (636), Expect = 9e-64, Method: Composition-based stats. Identities = 112/348 (32%), Positives = 186/348 (53%), Gaps = 12/348 (3%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 VSEL+ K ++E++L+ + + GE+S H SGH YF LKD S I ++KG K+ Sbjct: 3 VSELNLKAKALLETHLNDIVLSGELSKITM-HGSGHWYFDLKDEKSSIACAMFKGANLKV 61 Query: 77 EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136 +F P+ G ++G ++ + S +YQ I S+ +G G L K++L +EGLF+ + Sbjct: 62 DFQPKVGDFLELVGSVSLYAESGRYQFIASSMKKAGMGDLEAQFLALKERLQKEGLFNSE 121 Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANAI 194 +K +P PK I +ITS T A ++D+L+ I+ + F ++ +F QG + A+ Sbjct: 122 YKKTLPQFPKKIGIITSKTSAALQDMLKLINQKEYFLAKIYVFNALTQGSGAAYSLIQAL 181 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + + + D+II+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 182 KKADEI-------GLDVIIIARGGGSREDLFCFNDEGLAREIFKAKTPIISAIGHEIDYV 234 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++D+ AD RAPTP+ A + + + L+ L LE +L + ++Y N L++L K Sbjct: 235 ISDFVADFRAPTPSAAIDTLLYSRLDLEQGLDLLEEKLTKLWESKLEYCENLLSNLHKFF 294 Query: 315 --PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + +L L ++ + +E I + + N Sbjct: 295 KAKSLETMIEAKEKQLAFLLKQAKIIIESKIQKAELELQKLQNAFFQH 342 >gi|254303092|ref|ZP_04970450.1| exodeoxyribonuclease VII [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323284|gb|EDK88534.1| exodeoxyribonuclease VII [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 404 Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats. Identities = 122/376 (32%), Positives = 187/376 (49%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD S+I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDGKSQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 L +I +EG + G + + ++Q+++ + G+L LEK K+KL Sbjct: 61 NYKLKRIPEDLKEGDLIKLFGDVGFYEVKGEFQVLVRYIEKQNALGSLYAKLEKVKEKLA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 G F ++HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 GLGYFDEEHKKDLPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN +++ D II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIED------IDFIIAGRGGGSIEDLWAFNEEEVAIAFFNSKKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L N T++ R + L+ +E I +K F + I++I I+ Sbjct: 295 LLRIENYHFKNFPNTINNLREIIVEKEICLKDAIERFIEQKRNIFENKIDKITVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYTVSQVKNKRID 370 Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ I+ + + + + I K Y+ K+E + Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLLDDLKAREIYITKLLKSYVDNMKRELL 295 Query: 400 AILHMLR-EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + N I L I + ++ + I+ + NTL Sbjct: 296 LRIENYHFKNFPNTINNLREIIVEKEICLKDAIERFIEQKRNIFENKIDKITVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGYT Q N I ++ ++ DG+ +IV K Sbjct: 356 KRGYTVSQVKNKR-IDVLDDIEINDEMITILKDGKVISIVKEK 397 >gi|148985102|ref|ZP_01818341.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP3-BS71] gi|147922547|gb|EDK73665.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP3-BS71] Length = 278 Score = 249 bits (635), Expect = 1e-63, Method: Composition-based stats. Identities = 123/285 (43%), Positives = 173/285 (60%), Gaps = 11/285 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+H+ I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDHAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SRIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLTE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K +P K I V+TS +GAVIRDI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQALPQFSKRIGVVTSRSGAVIRDIITTVSRRFPGVDILLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 EIA I + N D++I+ RGGGSIEDLW FN+E++VRAI S +P+IS++G Sbjct: 180 EIARNIARANQR------DDLDLLIIGRGGGSIEDLWAFNEEIVVRAIFESRLPVISSVG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 HETD TLAD+ AD RA TPT AAE+A PV + + + + Sbjct: 234 HETDVTLADFVADRRAATPTAAAELATPVTKLDVLAHLQNQENGW 278 >gi|295111307|emb|CBL28057.1| exodeoxyribonuclease VII, large subunit [Synergistetes bacterium SGP1] Length = 415 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 11/371 (2%) Query: 14 EYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E +V EL+ +++ + S+L + + GEI+ ++ H+SGH YF+L +RI +++ Sbjct: 10 ELTVDELNAYIQGLFNSDLLLKALVISGEIAEFK-RHTSGHCYFTLLGTDTRISCAMFRR 68 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + + P G + L+ G + +P YQ+ LIP G+G + A ++ K++L EG Sbjct: 69 DADLLPEWPRNGDQVLIEGSVGVYPQRGVYQLYARRLIPVGAGAIERARQELKRRLELEG 128 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEI 190 LF HK PI P +AVITS TGA +RD+L+ R+PL +++ P VQG + P++I Sbjct: 129 LFHPSHKRPISPYPSRVAVITSATGAALRDVLRISGRRYPLSDIVVVPTLVQGPDAPEDI 188 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A + D ++L RGGGS EDL F+DE +VRA+ N P++S IGHE Sbjct: 189 VRAFAR------AGAMSGVDCVLLVRGGGSREDLVPFDDERVVRAVRNCPFPVVSGIGHE 242 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TL+D AADL A TP+ AAE+ P + L + L + R+ R I + Sbjct: 243 VDSTLSDLAADLTASTPSAAAEVVFPDRAALLAWLAQVRQRVGGSARRRIGVERARCRLA 302 Query: 311 LKALPNSDQT-LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L+ + + + R RL R L ++ + + + + + + + Sbjct: 303 LEGMERALKLRTGTERSRLHEGLRALSRSMTLRLRDARSELSTRAASLSGLSPLAALARG 362 Query: 370 RQHILEKQQHI 380 + + + Sbjct: 363 YVIAEREGRRL 373 Score = 80.2 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 5/163 (3%) Query: 350 FNHIINRIKSDFLIHN---IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHML 405 + + + + + +R +L + Q V R ++ + + L + Sbjct: 247 LSDLAADLTASTPSAAAEVVFPDRAALLAWLAQVRQRVGGSARRRIGVERARCRLALEGM 306 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465 K R + + + + + ++ +++ + +S L + L RGY Sbjct: 307 ERALKLRTGTERSRLHEGLRALSRSMTLRLRDARSELSTRAASLSGLSPLAALARGYVIA 366 Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 + + R + + + F DG+A+ +V AP Sbjct: 367 ERE-GRRLFSVREALSGAALSLCFRDGRADCLVRAIAPFDPPN 408 >gi|227432106|ref|ZP_03914118.1| exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352133|gb|EEJ42347.1| exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 425 Score = 248 bits (634), Expect = 1e-63, Method: Composition-based stats. Identities = 130/350 (37%), Positives = 194/350 (55%), Gaps = 18/350 (5%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAI 67 + +VS L+ +LK +++ L+ V V GEIS G H YFS+KD+ ++ I+A Sbjct: 6 NQYLTVSALTAYLKRKFDADPYLAKVYVTGEISNM-GRRRGPHLYFSIKDSESNAVINAS 64 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G +I+F PEEG++ IG++ + Y II+ES+ P G G L A E+ K+KL Sbjct: 65 MF-GYERRIKFKPEEGMKINAIGRVEIYEPRGSYSIILESMTPDGVGELFLAYEQLKRKL 123 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF K +P PK IAV+TSPTGAVI DI + + RFP ++VI+FP VQG++ Sbjct: 124 QAEGLFDLPKKQ-VPLFPKKIAVVTSPTGAVIEDIARTVQRRFPSVQVILFPAVVQGEKA 182 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I + +++ D +I+ RGGGSIEDLW FNDE + R +A+ P+IS+ Sbjct: 183 APTIIRQLQRID-------HMDFDTLIVGRGGGSIEDLWAFNDEKLARTVASMKTPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ-SSLINLEARLNNIIIRLIKYKIN 305 +GHETD TL D+ +D RA TPT AAE+A PV + L L R + I ++I + Sbjct: 236 VGHETDNTLVDFVSDRRAATPTAAAELATPVTLQQLTTRLQELHLRQISRIKQMIDMRQQ 295 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 LN + D+ + R+D+L L+ + + + I Sbjct: 296 RLNRVATHVIFQQPDRLYTGYNQRIDQLSHALQQLTKQKVINEEHKLAAI 345 Score = 93.3 bits (230), Expect = 8e-17, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 7/158 (4%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHM 404 + R++ L I + +Q I +QQ + + I +Q R + + H Sbjct: 268 LQQLTTRLQELHL-RQISRIKQMIDMRQQRLNRVATHVIFQQPDRLYTGYNQRIDQLSHA 326 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 L++ TK ++ + ++ R + + ++ + + + L + L GY Sbjct: 327 LQQLTKQKVINEEHKLAAILQRQQQLQRSLLQPVQERLQLLSTKLDLVSPLKILSSGYAI 386 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 ++ +N + N+ I + F DG A A + Sbjct: 387 VEH-DNKVVRSITNITINDEIDMRFSDGHATAKITGVQ 423 >gi|157414622|ref|YP_001481878.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 81116] gi|172047041|sp|A8FKB4|EX7L_CAMJ8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157385586|gb|ABV51901.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 81116] gi|307747262|gb|ADN90532.1| Exodeoxyribonuclease 7 large subunit [Campylobacter jejuni subsp. jejuni M1] gi|315931597|gb|EFV10563.1| Exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni 327] Length = 387 Score = 248 bits (633), Expect = 2e-63, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 178/349 (51%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ K ++E++ + + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKAKALLETHFEDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ P + A Sbjct: 121 LFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K ++ SL +E +L + I+ N L +L K Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342 >gi|237736952|ref|ZP_04567433.1| exodeoxyribonuclease VII large subunit [Fusobacterium mortiferum ATCC 9817] gi|229420814|gb|EEO35861.1| exodeoxyribonuclease VII large subunit [Fusobacterium mortiferum ATCC 9817] Length = 400 Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats. Identities = 113/360 (31%), Positives = 179/360 (49%), Gaps = 13/360 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 Y+VSE + +K +E N L + GE+SG + SGH YF+LKD ++I + +K Sbjct: 7 YTVSEFNRMVKGYIEENPSLREFFLEGELSGVT-YYKSGHLYFNLKDKDAQIKCVAFKYK 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEG 131 +I ++G + G + + +QI++ + G + LE+ KK + +G Sbjct: 66 FKRIAEDLKDGDSVKLFGDVGFYENRGDFQILVRHIEKKNMLGDMFAKLEELKKTMERKG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190 FS +K P+P P+ I V+T+ TGA ++DI++ + R + + I+P KVQG EI Sbjct: 126 YFSSIYKKPLPRYPRTIGVVTAITGAAVQDIIKTVKKRDNTIDIYIYPAKVQGVGASDEI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I LN + P D+II RGGGSIEDLW FN+E A NS PIISA+GHE Sbjct: 186 VRGIEVLNKI------PEIDMIIAGRGGGSIEDLWSFNEEKTAMAFFNSKKPIISAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLN 308 D L D AD+RA TPT A E++VP + SL + E L ++ ++ K Sbjct: 240 IDNLLTDLVADVRAATPTQAVELSVPERRKSIESLEDRERYLKTLMKNILVSKRKELESR 299 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L N + + L L+ +E + K + ++R+ + + +++ Sbjct: 300 KENYYLKNFSKVIEEKNNLLIERENRLQRVIEYYMESKKNQLENRVHRLITLNPLKTLER 359 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 20/163 (12%), Positives = 54/163 (33%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQ----KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 ++ +++ ++ + R+ I + + + ++KE Sbjct: 238 HEIDNLLTDLVADVRAATPTQAVELSVPERRKSIESLEDRERYLKTLMKNILVSKRKELE 297 Query: 400 AIL-HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + I + + + R++ ++ + ++S + L + TL Sbjct: 298 SRKENYYLKNFSKVIEEKNNLLIERENRLQRVIEYYMESKKNQLENRVHRLITLNPLKTL 357 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 +RGY+ + N + L I I DG + V Sbjct: 358 ERGYSVVT-KNGVGVKSVSQLTAGDEINIKVNDGNIISEVKKI 399 >gi|116618698|ref|YP_819069.1| exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097545|gb|ABJ62696.1| Exodeoxyribonuclease VII large subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 425 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 130/350 (37%), Positives = 194/350 (55%), Gaps = 18/350 (5%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAI 67 + +VS L+ +LK +++ L+ V V GEIS G H YFS+KD+ ++ I+A Sbjct: 6 NQYLTVSALTAYLKRKFDADPYLAKVYVTGEISNM-GRRRGPHLYFSIKDSESNAVINAS 64 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++ G +I+F PEEG++ IG++ + Y II+ES+ P G G L A E+ K+KL Sbjct: 65 MF-GYERRIKFQPEEGMKINAIGRVEIYEPRGSYSIILESMTPDGVGELFLAYEQLKRKL 123 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EGLF K +P PK IAV+TSPTGAVI DI + + RFP +VI+FP VQG++ Sbjct: 124 QAEGLFDLPKKQ-VPLFPKKIAVVTSPTGAVIEDIARTVQRRFPSAQVILFPAVVQGEKA 182 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I + +++ + D +I+ RGGGSIEDLW FNDE + R +A+ P+IS+ Sbjct: 183 APTIIRQLQRIDNM-------DFDTLIVGRGGGSIEDLWAFNDEKLARTVASMKTPVISS 235 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ-SSLINLEARLNNIIIRLIKYKIN 305 +GHETD TL D+ +D RA TPT AAE+A PV + L L R + I ++I + Sbjct: 236 VGHETDNTLVDFVSDRRAATPTAAAELATPVTLQQLTTRLQELHLRQISRIKQMIDMRQQ 295 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 LN + D+ + R+D+L L+ + + + I Sbjct: 296 RLNRVATHVIFQQPDRLYTGYNQRIDQLSHALQQLTKQKVINEEHKLAAI 345 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 61/158 (38%), Gaps = 7/158 (4%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ-----IVKQHLRYIFLEKKEKIAILHM 404 + R++ L I + +Q I +QQ + + I +Q R + + H Sbjct: 268 LQQLTTRLQELHL-RQISRIKQMIDMRQQRLNRVATHVIFQQPDRLYTGYNQRIDQLSHA 326 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 L++ TK ++ + ++ R + + ++ + + + L + L GY Sbjct: 327 LQQLTKQKVINEEHKLAAILQRQQQLQRSLLQPVQERLQLLSTKLDLVSPLKILSSGYAI 386 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 ++ +N + N+ I ++F DG A A + Sbjct: 387 VEH-DNKVVRSITNITINDEIDMHFSDGHATAKITGVQ 423 >gi|283955197|ref|ZP_06372699.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793410|gb|EFC32177.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 414] Length = 387 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 107/349 (30%), Positives = 176/349 (50%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ +K ++E++ + + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKVKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K+ L +EGLF Sbjct: 61 VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKECLQKEGLFDA 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 K +P PK + +ITS T A ++D+L+ I + F ++ +F QG+ + A Sbjct: 121 HFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYLFDALTQGNNAAFSLVQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------NLDVLIIARGGGSKEDLFCFNDENLAREIFKARTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K L+ SL E +L + ++ N L +L + Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDLEQSLDLAEEKLTQLWNNKMQNYENLLLNLNRF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSHHIEKQLNHLLVNQMRYNELKLDKLQNVYSQH 342 >gi|121613063|ref|YP_001000035.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|148926420|ref|ZP_01810103.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|167004993|ref|ZP_02270751.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|205356025|ref|ZP_03222793.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|158513878|sp|A1VY44|EX7L_CAMJJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|87250083|gb|EAQ73041.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|145844583|gb|EDK21689.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|205346149|gb|EDZ32784.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni CG8421] Length = 387 Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ K ++E++ + + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKAKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPAVGNFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 + K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ P + A Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K ++ SL +E +L + I+ N L +L K Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNYKIQNYENLLLNLSKF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342 >gi|57237376|ref|YP_178389.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni RM1221] gi|81819567|sp|Q5HWE6|EX7L_CAMJR RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|57166180|gb|AAW34959.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni RM1221] gi|315057746|gb|ADT72075.1| Exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni S3] Length = 387 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 110/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ K ++E++ + + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKAKALLETHFDDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPAVGNFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 + K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ P + A Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIRA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K ++ SL +E +L + I+ N L +L K Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNYKIQNYENLLLNLSKF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342 >gi|86151353|ref|ZP_01069568.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86153887|ref|ZP_01072090.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|85841700|gb|EAQ58947.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85842848|gb|EAQ60060.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni HB93-13] Length = 387 Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats. Identities = 111/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ K ++E++ + + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKAKALLETHFEDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPVVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 + K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ P + A Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + DI+I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------DLDILIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K ++ SL +E +L + I+ N L +L K Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSHNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342 >gi|283955750|ref|ZP_06373241.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283792705|gb|EFC31483.1| exodeoxyribonuclease VII large subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 387 Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats. Identities = 109/349 (31%), Positives = 179/349 (51%), Gaps = 12/349 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ K ++E++ ++ + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKAKALLETHFDNIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPAVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDS 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 + K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ + A Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNASFSLIQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + D++I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------DLDVLIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K ++ SL +E +L + I+ N L +L K Sbjct: 234 VISDFVADFRAPTPSAAIDALFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293 Query: 314 LP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + ++L H L + + + N Sbjct: 294 FKFNSLPKIIDEKIKQSYNIEKQLNHLLANQMRYNELKLDKLQNAYLQH 342 >gi|257469333|ref|ZP_05633427.1| exodeoxyribonuclease VII large subunit [Fusobacterium ulcerans ATCC 49185] gi|317063580|ref|ZP_07928065.1| exodeoxyribonuclease VII large subunit [Fusobacterium ulcerans ATCC 49185] gi|313689256|gb|EFS26091.1| exodeoxyribonuclease VII large subunit [Fusobacterium ulcerans ATCC 49185] Length = 406 Score = 246 bits (629), Expect = 5e-63, Method: Composition-based stats. Identities = 113/360 (31%), Positives = 184/360 (51%), Gaps = 13/360 (3%) Query: 15 YSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSVSE + +K+ +E S+L + GE+SG + SGH YF+LKD +++ +K Sbjct: 7 YSVSEFNKKVKNYLEENSDLREFFLEGEMSGVT-YYKSGHLYFNLKDKEAQVKCAAFKYK 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-GTLLTALEKRKKKLLEEG 131 +I ++G + G + + +QI++ + G L LEK KK++ ++G Sbjct: 66 FKRIAEDLKDGDSVKIFGDVGFYENRGDFQILVRHIEKKNELGELFAKLEKLKKEMADQG 125 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190 F HK +P PK I V+T+ TGA I+DI++ I R + + ++P KVQG +EI Sbjct: 126 YFDPAHKKLLPKYPKNIGVVTAYTGAAIQDIIKTIKKRDDTINIYVYPAKVQGIGAKEEI 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 I LN + D+II RGGGSIEDLW FN++ + A NS PIISA+GHE Sbjct: 186 VKGIKTLNKI------EGIDLIIAGRGGGSIEDLWSFNEKEVALAFYNSEKPIISAVGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D+ L+D AD RA TPT A E++VP ++ S+ + L +++ ++ L Sbjct: 240 IDYLLSDLTADARAATPTQAVELSVPERKKTLESIEDRNRYLKSLMKSYMEILKRELEKR 299 Query: 311 LK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + N + + + L+ + E I + N+ IN+I + + +++ Sbjct: 300 ENNYYIKNFKRNIEEKNQEVIEKEILLKKSFERHIQNLQNNLNNRINKIVNLNPLETLKR 359 Score = 67.9 bits (164), Expect = 5e-09, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 58/141 (41%), Gaps = 3/141 (2%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +K + I ++ ++++ ++K ++ + E +++ ++ + K I + + + Sbjct: 268 KKTLESIEDRNRYLKSLMKSYMEILKRELEKRENNYYI--KNFKRNIEEKNQEVIEKEIL 325 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ I++ +++ + + TLKRGY+ + I + +L I Sbjct: 326 LKKSFERHIQNLQNNLNNRINKIVNLNPLETLKRGYSVVT-KKGTSIKKVSDLLIDDEID 384 Query: 487 INFFDGQANAIVINKAPPKEQ 507 I DG IV K+ Sbjct: 385 IKMTDGLIKGIVKEIKNEKDT 405 >gi|282856377|ref|ZP_06265656.1| exodeoxyribonuclease VII, large subunit [Pyramidobacter piscolens W5455] gi|282585748|gb|EFB91037.1| exodeoxyribonuclease VII, large subunit [Pyramidobacter piscolens W5455] Length = 419 Score = 246 bits (627), Expect = 9e-63, Method: Composition-based stats. Identities = 103/421 (24%), Positives = 184/421 (43%), Gaps = 11/421 (2%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 + +V E++ +K++++ L+H+ V GE++ ++ H SGH YF LK ++ Sbjct: 6 PARVKNAAAPLTVDEVALRVKNLLDYDETLAHLVVEGELTDFK-RHVSGHVYFVLKGQNA 64 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + ++++G + P G +V G + + QI + + P G G A E+ Sbjct: 65 SLPCVMFRGDAAGMLLWPAVGDRVVVSGNVRLYEARGAVQIYAQKMYPLGLGAAARAKEE 124 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 + +L +EGLF+ K P+P P+ +A +TS TGA +RD++++ RFP +I+ P V Sbjct: 125 LRLRLEKEGLFAPARKRPLPRYPRRVACVTSDTGAAVRDVIRQFRTRFPAAELIVVPCLV 184 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG + A L+ P D +L RGGG+ EDL F+DE +VR +A ++ Sbjct: 185 QG------VRAAESAALALRRASALPGVDAALLVRGGGAKEDLNPFDDEELVREVARCAV 238 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR-LI 300 P++ +GHE DW+L D AAD R PTPT AA P + L L+ R L Sbjct: 239 PVVCGVGHEVDWSLCDLAADRREPTPTAAAASVFPDRAEELDGLAECARLLHMHAARALR 298 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 K N ++L + RLD L + + + + +++ Sbjct: 299 DEKRELANREENMRRFWGRSLENAAQRLDDLDEKTTYRACAELRLMNGRLDEFERSLENL 358 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ ++ + + + + + + + HI Sbjct: 359 SPAALARRGYSLVMSGGRPLLSSAQARCGDALSVQMLDGTVAGHVESVEPRGLNVRDAHI 418 Query: 421 K 421 + Sbjct: 419 Q 419 Score = 74.0 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 15/135 (11%), Positives = 42/135 (31%), Gaps = 1/135 (0%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + + + + R + EK+E +R + + L + Sbjct: 275 RAEELDGLAECARLLHMHAARALRDEKRELANREENMRRFWGRSLENAAQRLDDLDEKTT 334 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + +++ + + R L++ + +RGY+ + + + + + Sbjct: 335 YRACAELRLMNGRLDEFERSLENLSPAALARRGYSLVM-SGGRPLLSSAQARCGDALSVQ 393 Query: 489 FFDGQANAIVINKAP 503 DG V + P Sbjct: 394 MLDGTVAGHVESVEP 408 >gi|261350690|ref|ZP_05976107.1| exodeoxyribonuclease VII, large subunit [Methanobrevibacter smithii DSM 2374] gi|288861473|gb|EFC93771.1| exodeoxyribonuclease VII, large subunit [Methanobrevibacter smithii DSM 2374] Length = 404 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 127/397 (31%), Positives = 198/397 (49%), Gaps = 13/397 (3%) Query: 11 DHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++ YS+S ++ + + + + +RGEI+ + G ++SGH YFSLKD +S I ++ Sbjct: 3 ENDIYSISAINNLIDKKISYCDDFKKIKIRGEITNFNGSYNSGHYYFSLKDKNSSISCVM 62 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 +K + ++F P+ G++ + G+++ + Q + + +G G L A EK KKKL Sbjct: 63 FKLSTKSLDFEPKNGVDVVASGEVSFYKVRGNLQFRVRKMQEAGLGDLYIAFEKLKKKLD 122 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPK 188 +EGLF D+ IP PK I VITS +G I+DI+ I R+P +I++ VQG + Sbjct: 123 KEGLFKDKKA--IPQYPKKIGVITSASGKAIKDIVNNIEKRWPAEIIVWNTTVQGANSTR 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I I N D+II+ RGGGS +DLW FN E IVR+IANS P+I+AIG Sbjct: 181 SITKNIALANK-------TDVDVIIVGRGGGSTQDLWDFNKEEIVRSIANSKKPVITAIG 233 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINT 306 H TD TL+D A+D A TPT AAE+ VP K L L N+E RLN++I + Sbjct: 234 HSTDKTLSDMASDKVAATPTKAAELVVPNKVELNEKLKNIETRLNDLINSKLDNLTHKLN 293 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 ++ K L + + L L E +L +I ++ N + + + Sbjct: 294 ISKNNKTLKDHLSKYKNHQTNLVLLKTTAEKSLNQLIQSNELQLDNFNNSYILNNPDYIL 353 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 K I + ++ + L + L Sbjct: 354 NKKVGKITLFKNELDNNISNCLLEYENKLNLHFKNLK 390 >gi|315123893|ref|YP_004065897.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017615|gb|ADT65708.1| exodeoxyribonuclease VII, large subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 303 Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats. Identities = 107/302 (35%), Positives = 165/302 (54%), Gaps = 10/302 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 + +EL+ K ++E++ + + GEIS +H SGH YF LKD S I ++KG K Sbjct: 2 TPTELNLKAKALLETHFEDIVLSGEISKIT-LHGSGHWYFDLKDERSSIACAMFKGANLK 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + F P G + G ++ +P S +YQ I S+ +G G L K++L +EGLF Sbjct: 61 VGFKPVVGDFLELCGSVSLYPESGRYQFIATSMKKAGFGDLEAQFLALKERLQKEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR--FPLRVIIFPVKVQGDECPKEIANA 193 + K +P PK + +ITS T A ++D+L+ I + F ++ IF QG+ P + A Sbjct: 121 RFKKSLPKFPKKVGIITSKTSAALQDMLKLIHQKEYFLAKIYIFDALTQGNNAPFSLIQA 180 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + + + DI+I+ARGGGS EDL+ FNDE + R I + PIISAIGHE D+ Sbjct: 181 LKKADDM-------DLDILIIARGGGSREDLFCFNDENLAREIFKAKTPIISAIGHEIDY 233 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++D+ AD RAPTP+ A + K ++ SL +E +L + I+ N L +L K Sbjct: 234 VISDFVADFRAPTPSAAIDTLFYSKLDIEQSLDLMEEKLMQLWNHKIQNYENLLLNLSKF 293 Query: 314 LP 315 Sbjct: 294 FK 295 >gi|46201317|ref|ZP_00208057.1| COG1570: Exonuclease VII, large subunit [Magnetospirillum magnetotacticum MS-1] Length = 221 Score = 244 bits (622), Expect = 3e-62, Method: Composition-based stats. Identities = 112/218 (51%), Positives = 151/218 (69%), Gaps = 2/218 (0%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN S + PEYSVSELS L+ VE S V VRGEISG++ HSSGH YF+LKD Sbjct: 1 MNEERPAPS-NVPEYSVSELSGSLRKTVEDAFSFVRVRGEISGFK-RHSSGHLYFALKDA 58 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + +DA+ W+G+ K+ PE+G+E + G++TT+PG SKYQ+++E + +G G LL L Sbjct: 59 DAVLDAVCWRGSAGKLSIGPEDGMEVVATGRLTTYPGRSKYQMVVERMELAGQGALLKML 118 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E RKK+L+ EGLF K PIPF+P++I V+TSPTGAVIRDIL R++ RFP RV+++PV Sbjct: 119 EDRKKRLMAEGLFDTAKKRPIPFLPEVIGVVTSPTGAVIRDILHRLAERFPRRVLLWPVA 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218 VQGD ++A AI N L+ G PRPD++I+AR Sbjct: 179 VQGDGAAAQVAAAIRGFNALEPGGAVPRPDVLIVARAA 216 >gi|167947992|ref|ZP_02535066.1| Exodeoxyribonuclease VII [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 298 Score = 242 bits (618), Expect = 9e-62, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 146/244 (59%), Gaps = 8/244 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + YS+S L + ++E + + V GEIS +SGH YF+LKD ++ Sbjct: 1 MNSQLKPNRDIYSISRLVRESRAVIEGSFPLLWVEGEISNL-ARPASGHIYFTLKDQVAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +++ ++ F P+ G + LV +++ + ++Q+ IE + P+G G L A ++ Sbjct: 60 VRCAMFRIKRQRLRFQPQNGQQVLVRARVSLYEARGEFQLNIEHMEPAGEGALRQAFDRL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K KL EGLF +HK P+P +P+ I +ITSP+GA +RD+L ++ RFP + ++I PV+VQ Sbjct: 120 KAKLAAEGLFDSEHKQPLPRLPRQIGLITSPSGAALRDLLTVLARRFPAIPLLIHPVQVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 GD ++I + N + R D++ILARGGGS+EDL FNDE + RAI +S IP Sbjct: 180 GDTAAQQIVQMLQLANRQQ------RCDLLILARGGGSLEDLQPFNDERVARAIFDSQIP 233 Query: 243 IISA 246 +I+ Sbjct: 234 LITG 237 >gi|269792647|ref|YP_003317551.1| exodeoxyribonuclease VII, large subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100282|gb|ACZ19269.1| exodeoxyribonuclease VII, large subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 397 Score = 241 bits (614), Expect = 3e-61, Method: Composition-based stats. Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 10/366 (2%) Query: 17 VSELSYHLKHIV-ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 V L+ ++ + ++ VRG++ G + H+SGH YF+L +RI +++ + Sbjct: 9 VDSLTDRIRSALTSPPFRNIWVRGQLEGLK-RHTSGHVYFTLLGASARISCAMFRSSAAS 67 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + P +G E +V G + +P YQ+I L G G E ++KL EEGLF Sbjct: 68 VLHWPGDGQEVVVNGSLDLYPPRGTYQVIASKLYHLGVGDRARQKELVRRKLEEEGLFDP 127 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+P IP + V+TSP+GA ++D+++ RFP +++ P +VQG P IA A+ Sbjct: 128 RLKRPVPPIPSRVLVVTSPSGAALQDVIRVSGERFPQCEILVIPAQVQGFGAPGSIAEAM 187 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 + + + P ++L RGGGS +DL F+ E + RAI P++ +GH+ D T Sbjct: 188 RRASKI------PAGSCVMLVRGGGSRDDLDPFDQEEVARAIRACPYPVVVGVGHQVDTT 241 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD AADL APTP+GAAE P + L + + ++ + R I L+SL L Sbjct: 242 IADLAADLSAPTPSGAAERVFPDRRELARRVGGMLKLGSSHLKRRITASGARLDSLGSRL 301 Query: 315 PNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + S +RL L L + + R Y + +++ + +++ I Sbjct: 302 KRPLEGAFSREDFRLRSLRSSAASALRLSLERGYGQLRDLSGALEALSPLGVLKRGYAEI 361 Query: 374 LEKQQH 379 + Sbjct: 362 QDMNGR 367 Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 52/161 (32%), Gaps = 4/161 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKI 399 + + + + ++ E + ++ R I Sbjct: 236 HQVDTTIADLAADLSAPTPSGAAERVFPDRRELARRVGGMLKLGSSHLKRRITASGARLD 295 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 ++ L+ + ++ L + L ++ + + + L++ + LK Sbjct: 296 SLGSRLKRPLEGAFSREDFRLRSLRSSAASALRLSLERGYGQLRDLSGALEALSPLGVLK 355 Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 RGY IQD N I +L R+ I F DG A ++ Sbjct: 356 RGYAEIQDMNGRKIPCAADLVPGQRVTILFQDGSRPARILG 396 >gi|38233538|ref|NP_939305.1| exodeoxyribonuclease VII large subunit [Corynebacterium diphtheriae NCTC 13129] gi|81829937|sp|Q6NI37|EX7L_CORDI RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|38199798|emb|CAE49461.1| Exodeoxyribonuclease VII large subunit [Corynebacterium diphtheriae] Length = 413 Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats. Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + + V EL+ +K +E L H+ V G+I+ S +Y +L+D + Sbjct: 1 MAAQPNAPESAWPVRELNSKVKSWIER-LGHLWVEGQITQLNMKPSWKFSYITLRDPEAE 59 Query: 64 IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 L+ + ++G +V GK + G + + + + P G G LL +E Sbjct: 60 ASVQLTCATSLLHSLPSRLQDGDRVVVYGKPAFYEGRGSFSLWVTDIRPVGVGELLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + +++L EGLF K P+PF+P I +IT A RD+L R+P ++ + Sbjct: 120 RLRQQLASEGLFDPALKKPLPFLPHTIGLITGRGSAAERDVLAVAHSRWPEVKFNVINTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG EI A+ +L+ P D+II+ARGGGS+EDL F++E + RA+ + Sbjct: 180 VQGARAVPEIIEALQRLDA------DPSVDVIIIARGGGSVEDLLPFSEEALQRAVVAAH 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP + + L +R + + Sbjct: 234 TPVVSAIGHEPDNPVLDNVADLRAATPTDAAKKVVPDVAAERQLIAELRSRSAAALRGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L ++ L + + ++ R + R + ++ ++ + + ++ Sbjct: 294 HKERQQLAAVRSRPALADPVRAITLHREEIARSISSIRRDMRYMLSTERATVASLRQQVA 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPSATLAR 363 Score = 77.1 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 10/161 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410 +++ +K + ++Q I ++ + + ++ L +R + Sbjct: 253 ADLRAATPTDAAKKVVPDVAAERQLIAELRSRSAAALRGWVHKERQQLAAVRSRPALADP 312 Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 I I + I+ I + + + + +V+ + + + TL RGY +Q Sbjct: 313 VRAITLHREEIARSISSIRRDMRYMLSTERATVASLRQQVAALGPSATLARGYAVVQVVP 372 Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + +T +++ I DG A + P Sbjct: 373 RDGSAPEVVTTIGMSPPGSQLRIRVADGSITAAAMQTTPAD 413 >gi|297192336|ref|ZP_06909734.1| exodeoxyribonuclease 7 large subunit [Streptomyces pristinaespiralis ATCC 25486] gi|297151301|gb|EFH31073.1| exodeoxyribonuclease 7 large subunit [Streptomyces pristinaespiralis ATCC 25486] Length = 402 Score = 240 bits (612), Expect = 5e-61, Method: Composition-based stats. Identities = 103/366 (28%), Positives = 167/366 (45%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 NTSAESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVG 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V K + + + + P G G LL LE+ K+ Sbjct: 63 VTCFRQVFDAVADVVTEGARVVVHAKPEWYAPRGQLSLRAVEIRPVGIGELLARLEQLKR 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K +PF+P + ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLGAEGLFAADRKKSLPFLPHRVGLVCGRASAAERDVLENARRRWPHVRFEVRNVAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L E D+II+ARGGGS+EDL F+DE +VRA+A S P++ Sbjct: 183 NAVAQVVQAVKELDALDE------VDVIIVARGGGSVEDLLPFSDEQLVRAVAACSTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R + L+ + Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELVRVRQLRDRALRTVQGLLDREE 296 Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L L + + + + +D L L ++ R H R+ S Sbjct: 297 HGLAHALARPCMEHPRRMVDERAAEVDALVARSRRVLGHLLDRADSELAHTRARVVSLSP 356 Query: 363 IHNIQK 368 +++ Sbjct: 357 AATLER 362 Score = 92.5 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 2/129 (1%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + + + V+ L +A E + + + L+ R +L Sbjct: 276 RVRQLRDRALRTVQGLLDREEHGLAHALAR--PCMEHPRRMVDERAAEVDALVARSRRVL 333 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 H + + ++ T + S + TL+RGY +Q + + + + + Sbjct: 334 GHLLDRADSELAHTRARVVSLSPAATLERGYAVLQRADGAVVRSPDEVTAGDPLRARVAE 393 Query: 492 GQANAIVIN 500 G+ V Sbjct: 394 GEFPVRVGE 402 >gi|305682178|ref|ZP_07404982.1| exodeoxyribonuclease VII, large subunit [Corynebacterium matruchotii ATCC 14266] gi|305658651|gb|EFM48154.1| exodeoxyribonuclease VII, large subunit [Corynebacterium matruchotii ATCC 14266] Length = 412 Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats. Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 12/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SR 63 ++ + V EL+ +K +E L +V V G+I+ Y+ + +Y +L+D + Sbjct: 2 ANHTTPETAWPVRELNSKVKGWIER-LGYVWVEGQITQYKANNRWKFSYLTLRDPEIEAS 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I L + +G +V GK + + G + + + + P G G +L +E+ Sbjct: 61 IQITCNTTLLTSADNPIAQGDRVVVYGKPSFYEGRGSFSLWVTEIRPVGIGAMLARIEQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 +++L EGLF D K+P+PF+P I +IT A RD+L R+P ++ I VQ Sbjct: 121 RRRLATEGLFDDSRKHPLPFLPNNIGLITGRGSAAERDVLSVSQGRWPDVQFTIINTTVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G EI A L E P D+II+ARGGGS+EDL F++E + A+A P Sbjct: 181 GARAVPEIIAA------LTELDANPDVDVIIIARGGGSVEDLLPFSEEALQYAVAECRTP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D + D ADLRA TPT AA+ VP + L R + + Sbjct: 235 VVSAIGHEPDNPILDNVADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSR 294 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L ++ L + L + + ++ ++ + + ++ + Sbjct: 295 EQQQLTAIRSRPVLNDPLTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATL 354 Query: 361 FLIHNIQK 368 + + Sbjct: 355 GPAATLAR 362 Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 50/161 (31%), Gaps = 10/161 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ +L + Q + ++ + + + L +R + Sbjct: 252 ADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSREQQQLTAIRSRPVLNDP 311 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 + + + IT + H + + V+ + + TL RGY +Q Sbjct: 312 LTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATLGPAATLARGYAVVQVVP 371 Query: 468 TNNN---FITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + +++ I DG A + P Sbjct: 372 RDGRPAEVVMSIDQSPPGSQLRIRVGDGSITAAAMQTTPAD 412 >gi|297202127|ref|ZP_06919524.1| exodeoxyribonuclease VII, large subunit [Streptomyces sviceus ATCC 29083] gi|197713563|gb|EDY57597.1| exodeoxyribonuclease VII, large subunit [Streptomyces sviceus ATCC 29083] Length = 402 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 104/394 (26%), Positives = 177/394 (44%), Gaps = 12/394 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 NS V E+S + ++ L V V G+I+ +G + +L+D + Sbjct: 4 NSTPEAPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 63 VTCFRQVFDDVADVVSEGARVVVLAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P+++ ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLAAEGLFAPERKKPLPFLPQLVGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L D+II+ARGGGS+EDL F+DE +VRA+A+ P++ Sbjct: 183 HAVPQVVQAVKELDAL------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVASCRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L DY ADLRA TPT AA+ VP + L R + ++ + Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVRALRDRARRCVESFLQREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + + L L ++ R H R+ + Sbjct: 297 RCLAQALARPSIEDPHRMIDERADHVAALADRARRTLGHLLDRADSELTHTHARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 +Q+ + H+ + + L + Sbjct: 357 AATLQRGYAVLQRADGHVVRSPDEVTAEETLRAR 390 Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 2/132 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + V+ L+ + +A + E I H+ L R Sbjct: 272 EEYERVRALRDRARRCVESFLQREERCLAQALARPSI--EDPHRMIDERADHVAALADRA 329 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L H + + ++ T + + + TL+RGY +Q + + + + + + Sbjct: 330 RRTLGHLLDRADSELTHTHARVVALSPAATLQRGYAVLQRADGHVVRSPDEVTAEETLRA 389 Query: 488 NFFDGQANAIVI 499 +G+ V Sbjct: 390 RVAEGEFTVRVD 401 >gi|225022960|ref|ZP_03712152.1| hypothetical protein CORMATOL_03006 [Corynebacterium matruchotii ATCC 33806] gi|224944183|gb|EEG25392.1| hypothetical protein CORMATOL_03006 [Corynebacterium matruchotii ATCC 33806] Length = 412 Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats. Identities = 98/368 (26%), Positives = 167/368 (45%), Gaps = 12/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SR 63 ++ + V EL+ +K +E L +V V G+I+ Y+ + +Y +L+D + Sbjct: 2 ANHTTPETAWPVRELNSKVKGWIER-LGYVWVEGQITQYKANNRWKFSYLTLRDPEIEAS 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 I L + +G +V GK + + G + + + + P G G +L +E+ Sbjct: 61 IQITCNTTLLTSADNPIAQGDRVVVYGKPSFYEGRGSFSLWVTEIRPVGIGAMLARIEQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 +++L EGLF D K+P+PF+P I +IT A RD+L R+P ++ I VQ Sbjct: 121 RRRLATEGLFDDSRKHPLPFLPNNIGLITGRGSAAERDVLSVSQGRWPDVQFTIINTAVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G EI A L E P D+II+ARGGGS+EDL F++E + A+A P Sbjct: 181 GARAVPEIIAA------LAELDANPDVDVIIIARGGGSVEDLLPFSEEALQYAVAECRTP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D + D ADLRA TPT AA+ VP + L R + + Sbjct: 235 VVSAIGHEPDNPILDNVADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSR 294 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L ++ L + L + + ++ ++ + + ++ + Sbjct: 295 EQQQLTAIRSRPVLNDPLTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATL 354 Query: 361 FLIHNIQK 368 + + Sbjct: 355 GPAATLAR 362 Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 50/161 (31%), Gaps = 10/161 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ +L + Q + ++ + + + L +R + Sbjct: 252 ADLRAATPTDAAKRVVPDVLAELQQVRELRGRAAAALRGWVSREQQQLTAIRSRPVLNDP 311 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 + + + IT + H + + V+ + + TL RGY +Q Sbjct: 312 LTGLRQRWIDVHQHITAARREIQHLLTTETNQVTALRTQVATLGPAATLARGYAVVQVVP 371 Query: 468 TNNN---FITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + +++ I DG A + P Sbjct: 372 RDGRPAEVVMSIDQSPPGSQLRIRVGDGSITAAAMQTTPAD 412 >gi|239943960|ref|ZP_04695897.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus NRRL 15998] gi|239990416|ref|ZP_04711080.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus NRRL 11379] gi|291447424|ref|ZP_06586814.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus NRRL 15998] gi|291350371|gb|EFE77275.1| exodeoxyribonuclease VII large subunit [Streptomyces roseosporus NRRL 15998] Length = 407 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 100/366 (27%), Positives = 170/366 (46%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 N+ V E+S + ++ L + V G+I+ +G + +L+D + Sbjct: 4 NTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ ++I + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 63 VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATDIRPVGIGELLVRLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P++I ++ A RD+L+ R+P +R + VQG Sbjct: 123 SLAAEGLFALDRKQPLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ + E D+I++ARGGGS+EDL F+DE ++RA+A P++ Sbjct: 183 NAVAQVVQAVEELDAMDE------VDVIVVARGGGSVEDLLPFSDEQLIRAVAACRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R + L+ + Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREE 296 Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L A+ + + +D L L ++ R +H + R+ S Sbjct: 297 RGLAHALGRPAMERPQRLVDEREAEVDALLGRSRRVLGHLLDRADSELSHTLARVVSLSP 356 Query: 363 IHNIQK 368 +++ Sbjct: 357 AATLER 362 Score = 87.5 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 6/153 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407 ++ +++ +K + E+ + ++Q+ + LR + + L E Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREERGLAHALGRPAME 309 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + + + L+ R +L H + + +S T + S + TL+RGY +Q Sbjct: 310 RPQRLVDEREAEVDALLGRSRRVLGHLLDRADSELSHTLARVVSLSPAATLERGYAVLQR 369 Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVI 499 + + + A + +G+ V Sbjct: 370 PDGHVVRSPDEAGAPGEPLRARVSEGEFTVRVD 402 >gi|256397374|ref|YP_003118938.1| exodeoxyribonuclease VII large subunit [Catenulispora acidiphila DSM 44928] gi|256363600|gb|ACU77097.1| exodeoxyribonuclease VII, large subunit [Catenulispora acidiphila DSM 44928] Length = 422 Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats. Identities = 106/387 (27%), Positives = 177/387 (45%), Gaps = 13/387 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + ++S + P V +S + + S L + V G+++ S Y L+D + Sbjct: 1 MAMQSSAEEPI-PVRAVSEAVAGWI-SRLGAIWVEGQLAQINKRPGSQMVYLVLRDPSAD 58 Query: 64 IDAII--WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + I ++ + EG +V GK + S + I E + G G LL LE Sbjct: 59 VSVQITTFRRVFEAVVPPLTEGARVIVYGKPDFYVPRSSFSIRGEEIRQVGLGELLARLE 118 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL EGLF + K P+PF+P + +IT A RD+L+ R+P ++ + Sbjct: 119 MLKAKLKAEGLFDPRRKKPLPFLPHCVGLITGRASAAERDVLENAKRRWPGVQFRVVNTD 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + +I A+ QL+ P D+II+ARGGGS+EDL F+DE ++RA+ Sbjct: 179 VQGPKAVPQILPALAQLDA------DPEVDVIIIARGGGSVEDLLPFSDEALIRAVGECE 232 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D AD RA TPT AA+ VP + L + R++ Sbjct: 233 TPVVSAIGHEPDSPILDLVADFRASTPTDAAKRVVPDVAEEMDRVAELRRNAWRSVARIL 292 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L S + L + + R L+ L R ++ + R H + R++ Sbjct: 293 EREAMGLASFRQRPVLASPYSMIDGRRNDLEELTRRARSSVGHRLDRASDDLGHTLARVR 352 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVK 385 + + +++ +L H + + Sbjct: 353 ALSPMATLERGYSIVLAPSGHAVRSAE 379 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 62/173 (35%), Gaps = 5/173 (2%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ ++ ++ + E+ + ++ + R + + + L R++ Sbjct: 250 LVADFRASTPTDAAKRVVPDVAEEMDRVAELRRNAWRSVARILEREAMGLASFRQRPVLA 309 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I +++L R + H++ + T +++ + TL+RGY+ + Sbjct: 310 SPYSMIDGRRNDLEELTRRARSSVGHRLDRASDDLGHTLARVRALSPMATLERGYSIVLA 369 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520 + + + ++ + I F G+ +A V + + E Sbjct: 370 PSGHAVRSAEEVSEGDVLDIRFASGRVDAAVSEVFRADDASPDIASTEESPSE 422 >gi|317056627|ref|YP_004105094.1| exodeoxyribonuclease VII large subunit [Ruminococcus albus 7] gi|315448896|gb|ADU22460.1| exodeoxyribonuclease VII, large subunit [Ruminococcus albus 7] Length = 406 Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats. Identities = 125/361 (34%), Positives = 191/361 (52%), Gaps = 13/361 (3%) Query: 14 EYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 +VS+L+ L + E V+GEIS + +GHA+F++KD S I I++ G Sbjct: 3 VLTVSQLNRMLAFKIKQELKFKGAAVKGEISDFNIHFKTGHAFFTIKDESSSIKCIMFAG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEE 130 + K++ LPE G+ LV+G + + QII + G +G + E K+KL + Sbjct: 63 RVKKLKALPENGMSVLVMGDVEVYEREGSCQIIATEIAMLGNTGIVYAQTELLKEKLKKL 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189 G+F + K IP +PK +AV+TS GA ++DIL + R+PL V I+P VQGD P Sbjct: 123 GIFDQEKKKQIPLVPKKLAVVTSSGGAALQDILNIVGRRYPLCTVEIYPATVQGDTAPAS 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A A+ + D IIL+RGGGS EDL FN E +V A+A + P+ISA+GH Sbjct: 183 VAAALRAAD-------ISGADTIILSRGGGSSEDLNAFNSECVVMAVAECATPVISAVGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD TL DYAAD+RAPTP+ AAE+A P L SS+ ++ARL+ ++ K+ + Sbjct: 236 ETDTTLTDYAADMRAPTPSAAAELATPDITDLYSSVNVMKARLDTAFGLYLREKMIDVEK 295 Query: 310 LLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L + + L S RL +L E + + ++++ + + Sbjct: 296 LDTRLKASSPKRRLIESEKRLKEAETKLRMLFENKLRLSELRLDRAASQLQVLSPFNVLG 355 Query: 368 K 368 + Sbjct: 356 R 356 Score = 97.9 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 3/131 (2%) Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + ++ +LR ++ ++ L K R+ +K+ T++ + +K+ Sbjct: 274 MKARLDTAFGLYLREKMIDVEKLDTRLKA--SSPKRRLIESEKRLKEAETKLRMLFENKL 331 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + + LQ + N L RGY +++ ++ +T L +L+ F DG AN Sbjct: 332 RLSELRLDRAASQLQVLSPFNVLGRGYALVEN-DDTAVTSVSELKEGMDVLVRFSDGSAN 390 Query: 496 AIVINKAPPKE 506 A++ K Sbjct: 391 AVITKINDRKA 401 >gi|213161520|ref|ZP_03347230.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 346 Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats. Identities = 113/397 (28%), Positives = 171/397 (43%), Gaps = 56/397 (14%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 P+G G L E+ K KL EGLF QHK P+P + VITS TGA + DIL + R Sbjct: 1 PAGEGLLQQKYEQLKAKLHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRR 60 Query: 170 FP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 P L VII+P VQGD+ P +I AI NT E D++I+ RGGGS+EDLW FN Sbjct: 61 DPSLPVIIYPTAVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFN 114 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 DE + RAI S IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + Sbjct: 115 DERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSA 174 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRK 346 + RL + + + + L L +R + +RL + + LE I + Sbjct: 175 QQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQA 234 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + R+ I + + I + + Sbjct: 235 TQRQQRVSQRLSQQNPQPRIHRVQSRIQQLEYR--------------------------- 267 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 + + ++ L++ + TL RGYT Sbjct: 268 --------------------LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVST 307 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 T+ + + + + + DG + V + P Sbjct: 308 TTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 344 >gi|290957814|ref|YP_003488996.1| exonuclease VII large subunit XseA [Streptomyces scabiei 87.22] gi|260647340|emb|CBG70445.1| putative exonuclease VII large subunit XseA [Streptomyces scabiei 87.22] Length = 408 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 12/381 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 NTSAESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 63 VTCYRQVFDTVADVVGEGARVVVLAKPEWYAPRGQLSLRATEIKPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K +PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLAAEGLFAPERKKTLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNVAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L D+I++ARGGGS+EDL F+DE +VRA+A+ P++ Sbjct: 183 HAVPQVVRAVKELDAL------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVASCRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L DY ADLRA TPT AA+ VP + L R + ++ + Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVRWLRDRARRCVEAFVEREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + + L L + R H R+ + Sbjct: 297 RGLAHALARPSMEDPHRMIDERADHVASLLDRGRRCLGHHLDRAVSELTHTHARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQI 383 +Q+ + H+ + Sbjct: 357 AATLQRGYAVLQRADGHVVRA 377 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 2/139 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + V+ + +A M E I H+ L+ R Sbjct: 272 EEYERVRWLRDRARRCVEAFVEREERGLAHALARPSM--EDPHRMIDERADHVASLLDRG 329 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L H + + ++ T + + + TL+RGY +Q + + + + Sbjct: 330 RRCLGHHLDRAVSELTHTHARVVALSPAATLQRGYAVLQRADGHVVRAPDEAGPDEPLRA 389 Query: 488 NFFDGQANAIVINKAPPKE 506 G+ V + Sbjct: 390 RVAGGEFVVRVEGTGTVAD 408 >gi|257452343|ref|ZP_05617642.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 3_1_5R] gi|317058886|ref|ZP_07923371.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 3_1_5R] gi|313684562|gb|EFS21397.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 3_1_5R] Length = 404 Score = 236 bits (603), Expect = 5e-60, Method: Composition-based stats. Identities = 113/389 (29%), Positives = 194/389 (49%), Gaps = 13/389 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y VS+ + +K +E N ++ + GE+SG + SGH YF LKD +S++ + Sbjct: 4 IYKVSDFNLKIKRYLEGNYEFKNMIIEGELSGVT-YYKSGHLYFQLKDENSQVKCAAFSY 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEE 130 I +EG + V + + +Q+++ + G + LEK KK++ E Sbjct: 63 QRRGIPGDLQEGEKVRVFADVGFYENRGDFQLLVRGIEKQNTLGKMYADLEKLKKRMAAE 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G FS +HK +P PK+I V+T+ TGA ++DI++ I R P + V I+ KVQG +E Sbjct: 123 GYFSLEHKKTLPSYPKVIGVVTALTGAAVQDIIKTIRKRDPRIDVYIYSAKVQGTGAEQE 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I LN + P D +I RGGGS+EDLW FN E + A +S PIISA+GH Sbjct: 183 IIAGIEALNRI------PEIDFLIAGRGGGSVEDLWAFNKEEVALAFYHSQKPIISAVGH 236 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D L+D+ AD+RA TPT A E++VP E + +L + + + K L Sbjct: 237 EVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGKQSLLRKKQDLQK 296 Query: 310 LLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + L + ++ + L +L +E I+ +K + + + ++ ++ +Q Sbjct: 297 RSQNYSLQHFPKSFESYKRDLMYREEQLRRGMEWILEQKKQEHHLALQKMIHLNPMYTLQ 356 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 K + + ++++ + + +L+ + Sbjct: 357 KGYAVLRKGKKNLRSLSEVNLQDEIEIRM 385 Score = 76.7 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 15/174 (8%), Positives = 46/174 (26%), Gaps = 6/174 (3%) Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 + + + + +++ ++ + + + Q I+ + Sbjct: 225 HSQKPIISAVGHEVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGK 284 Query: 393 LEKKEKIAILHML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 K L + + ++ + ++ + + Sbjct: 285 QSLLRKKQDLQKRSQNYSLQHFPKSFESYKRDLMYREEQLRRGMEWILEQKKQEHHLALQ 344 Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + TL++GY ++ + + + I I DG A V K Sbjct: 345 KMIHLNPMYTLQKGYAVLR-KGKKNLRSLSEVNLQDEIEIRMIDGIIKAEVKEK 397 >gi|194592434|gb|ACF76561.1| exonuclease [Streptomyces aureofaciens] Length = 401 Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats. Identities = 96/368 (26%), Positives = 170/368 (46%), Gaps = 12/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 S V ++S + ++ L V V G+I+ +G + +L+D + + Sbjct: 2 ANTSSPEAPLPVGKVSALIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPQADVS 60 Query: 66 --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ++ +++ + +EG +V K + + + + P G G LL L++ Sbjct: 61 LTVTCFRSVFDQVADVVQEGSRVVVHAKPEWYAARGQLSMRASEIRPVGLGELLARLQQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K++L EGLF+ + K +PF+P+ + ++T A RD+L+ R+P +R + V VQ Sbjct: 121 KRRLAGEGLFAAERKRRLPFLPQCVGLVTGRGSAAERDVLEYAWRRWPAVRFEVRNVPVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G I+ ++E P D+II+ARGGGS+EDL F+DE +VR +A + P Sbjct: 181 G------ISAMERVGAAVRELDEHPEVDVIIVARGGGSVEDLLPFSDEGMVRLVAAARTP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D L D+ ADLRA TPT AA+ VP + + L R + ++ Sbjct: 235 VVSAIGHEPDQPLLDFVADLRASTPTDAAKRVVPDVGEELAKVRQLRDRARRHVQSRVER 294 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L+ L L + L ++ L L + H + R+ + Sbjct: 295 EQHGLDGLRSRPALAAPHRMLDGRGQEVEGLLERARRTLRHRLDHAQSDLGHTLARVVAL 354 Query: 361 FLIHNIQK 368 +++ Sbjct: 355 SPAATLER 362 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 44/128 (34%), Gaps = 5/128 (3%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + ++ + Q + ++ + + A + ++ L+ R Sbjct: 278 RQLRDRARRHVQSRVEREQHGLDGLRSRPA-----LAAPHRMLDGRGQEVEGLLERARRT 332 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L H++ + + T + + + TL+RGY +Q + +T + + Sbjct: 333 LRHRLDHAQSDLGHTLARVVALSPAATLERGYAVLQRADGTVVTDPAQVTAGEGLHARVA 392 Query: 491 DGQANAIV 498 G + V Sbjct: 393 GGGFDVAV 400 >gi|307332232|ref|ZP_07611313.1| exodeoxyribonuclease VII, large subunit [Streptomyces violaceusniger Tu 4113] gi|306882132|gb|EFN13237.1| exodeoxyribonuclease VII, large subunit [Streptomyces violaceusniger Tu 4113] Length = 414 Score = 236 bits (603), Expect = 6e-60, Method: Composition-based stats. Identities = 101/373 (27%), Positives = 166/373 (44%), Gaps = 12/373 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 12 NTSAEAPIPVGEVSRLIGSWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISLT 70 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ ++I EG +V K + + + + P G G LL LE+ KK Sbjct: 71 VTCFRAVFDRIADTVTEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 130 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 131 ALAAEGLFAADRKKPLPFLPQLIGLVCGRASAAERDVLENARLRWPAVRFEVRNVAVQGV 190 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L P D+I++ARGGGS+EDL F+DE +VRA+A P++ Sbjct: 191 HAVPQVIEAVKELDAL------PEVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 244 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R + L+ + Sbjct: 245 SAIGHEPDSPLLDLVADLRASTPTDAAKKIVPDVGEELMRVQQLRERALRSVHGLLDREE 304 Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + + + R+ + L ++ R H R+ + Sbjct: 305 RGLAAALARPCMREPHRMVDERAERITAVLERARRCLGHLLDRADSELAHTQARVVALSP 364 Query: 363 IHNIQKNRQHILE 375 +++ + Sbjct: 365 AATLRRGYAVLQH 377 Score = 93.7 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 49/129 (37%), Gaps = 1/129 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM-LREQTKNRIFYLHTHIKKLITRIEF 429 + ++ QQ E+ ++ + E++ A L + + I ++ R Sbjct: 280 EELMRVQQLRERALRSVHGLLDREERGLAAALARPCMREPHRMVDERAERITAVLERARR 339 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 L H + + ++ T + + + TL+RGY +Q + + + + + Sbjct: 340 CLGHLLDRADSELAHTQARVVALSPAATLRRGYAVLQHPDGSVVRAADEVTEGEELRARV 399 Query: 490 FDGQANAIV 498 +G+ A V Sbjct: 400 AEGEFRARV 408 >gi|302542811|ref|ZP_07295153.1| exodeoxyribonuclease VII, large subunit [Streptomyces hygroscopicus ATCC 53653] gi|302460429|gb|EFL23522.1| exodeoxyribonuclease VII, large subunit [Streptomyces himastatinicus ATCC 53653] Length = 424 Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats. Identities = 100/374 (26%), Positives = 166/374 (44%), Gaps = 12/374 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 NTSAEAPIPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISLT 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ +KI EG +V K + + + + P G G LL LE+ KK Sbjct: 63 VTCFRAVFDKIADTVSEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 ALAAEGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARLRWPAVRFEVRNVAVQGT 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L D+I++ARGGGS+EDL F+DE +VR +A P++ Sbjct: 183 HAVPQVIEAVKELDALSA------VDVIVVARGGGSVEDLLPFSDEQLVRTVAACRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + +L R + L+ + Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKTVPDVGEELVRIQHLRERALRSVNGLLDREE 296 Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L + + ++ + L ++ R H R+ + Sbjct: 297 RGLESALARPCLRQPHRMVEEREEQIASVLDRARRCLGHLLDRADSELAHTQARVVALSP 356 Query: 363 IHNIQKNRQHILEK 376 +++ + Sbjct: 357 AATLRRGYAVLQHA 370 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 58/158 (36%), Gaps = 5/158 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI-----FLEKKEKIAILHMLRE 407 ++ +++ +K + E+ I+ + ++ LR + E+ + A+ Sbjct: 250 LVADLRASTPTDAAKKTVPDVGEELVRIQHLRERALRSVNGLLDREERGLESALARPCLR 309 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 Q + I ++ R L H + + ++ T + + + TL+RGY +Q Sbjct: 310 QPHRMVEEREEQIASVLDRARRCLGHLLDRADSELAHTQARVVALSPAATLRRGYAVLQH 369 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + + +A + +G+ + + Sbjct: 370 ADGSVVRAADEVAADEELRARVAEGEFAVRAVGGSAGA 407 >gi|312899120|ref|ZP_07758498.1| exodeoxyribonuclease VII, large subunit [Megasphaera micronuciformis F0359] gi|310619787|gb|EFQ03369.1| exodeoxyribonuclease VII, large subunit [Megasphaera micronuciformis F0359] Length = 409 Score = 236 bits (602), Expect = 7e-60, Method: Composition-based stats. Identities = 115/368 (31%), Positives = 188/368 (51%), Gaps = 12/368 (3%) Query: 16 SVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVS + +K +E + +V + G I G + S+GH Y ++ D+ + I A++++ Sbjct: 6 SVSTVVGRIKEDLEHDFRLKNVAMEGNIIGLK-RASTGHWYMNIHDDKASIRAVLFRNRA 64 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + +EG +V G++ + + IIE L G G L EK K +L +G F Sbjct: 65 GTMMSTVKEGDRVVVTGEVNVYEKGGTFSFIIERLFSQGVGNLQQQYEKNKAELYAQGYF 124 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 +K +P P + V+TS TGAV+ DI + + R + V+++PV VQGD ++ Sbjct: 125 DKDNKKELPRFPWKVGVLTSATGAVLHDIQKIRAERNEYIEVVLYPVPVQGDGAAPKLVK 184 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ E D++ILARGGGS+EDLW FND +VRA+ N+ +PII+A+GHETD Sbjct: 185 ALE------EAGKNRDLDVLILARGGGSMEDLWCFNDPAVVRAVYNTQVPIITAVGHETD 238 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TL DYAAD+RA TPT AAE+A P +Q + L ++ I+ + + Sbjct: 239 TTLVDYAADVRAATPTHAAELAFPSFTDIQLQIAALTETAGRLMDDCIERRFSQWERTAT 298 Query: 313 --ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L ++ +S + L+RL E ++ +K + I +R + ++K Sbjct: 299 RIRLHQYNEFVSVKKDNLNRLVESARQKTEYLLLQKQHALDKIKSRAEGMNPTAFLRKGY 358 Query: 371 QHILEKQQ 378 +L+ + Sbjct: 359 GQLLQNGE 366 Score = 63.6 bits (153), Expect = 8e-08, Method: Composition-based stats. Identities = 17/175 (9%), Positives = 48/175 (27%), Gaps = 6/175 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-- 401 +++ H + + Q I + + R + + + + Sbjct: 235 HETDTTLVDYAADVRAATPTHAAELAFPSFTDIQLQIAALTETAGRLMDDCIERRFSQWE 294 Query: 402 ---LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + Q + ++ +L+ + + ++ + L Sbjct: 295 RTATRIRLHQYNEFVSVKKDNLNRLVESARQKTEYLLLQKQHALDKIKSRAEGMNPTAFL 354 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 ++GY + N I + K + + DG A V E+ + + Sbjct: 355 RKGYGQLL-QNGEVIVGITAVNRKKPLEVQLVDGIIVAEVKEVIGRGEKNGQIKK 408 >gi|257463629|ref|ZP_05628020.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D12] gi|317061181|ref|ZP_07925666.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D12] gi|313686857|gb|EFS23692.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D12] Length = 404 Score = 236 bits (602), Expect = 7e-60, Method: Composition-based stats. Identities = 115/389 (29%), Positives = 189/389 (48%), Gaps = 13/389 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y VS+L+ +K +E N ++ V GE+SG + SGH YF LKD +S++ + Sbjct: 4 IYKVSDLTVKVKRYLEGNYEFKNMIVEGELSGVT-YYKSGHLYFQLKDENSQVKCAAFSY 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEE 130 I +EG + + + + ++Q++++ + GTL LE KK++ EE Sbjct: 63 QRRGIPNDLQEGEKVRIFADVGFYENRGEFQLLVKGIEKQNSLGTLYAELEALKKRMAEE 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G FS +HK + PK I V+T+ TGA I DI++ + R P + + I KVQG +E Sbjct: 123 GYFSLEHKRALQKYPKAIGVVTAITGAAIHDIVKTVRKRDPRISIYICSAKVQGIGAEQE 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I LN + P D II RGGGSIEDLW FN E + A +S PIISA+GH Sbjct: 183 IVAGIETLNQI------PEIDFIIAGRGGGSIEDLWAFNKEEVAMAFYHSQKPIISAVGH 236 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TL 307 E D L+D+ AD+RA TPT A E++VP + + + + RL + + + + Sbjct: 237 EVDILLSDFTADVRAATPTQAVELSVPELSYYEKEIQSRYDRLQFMGKQYLLKRKQDLQK 296 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + + + + L L+ ++E + RK + ++ + + + +Q Sbjct: 297 RRQEYVLQHFPKKIENYKRELLHREERLQKSMEAFLERKRQKYHLSLETVIHLNPMKILQ 356 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 K + + Q + + + L + Sbjct: 357 KGYAVLRKGGQRLRSLEEVSLHEEIEIQM 385 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 43/129 (33%), Gaps = 2/129 (1%) Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILH-MLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E Q +++ +Y+ K++ + + +I + R++ + Sbjct: 271 EIQSRYDRLQFMGKQYLLKRKQDLQKRRQEYVLQHFPKKIENYKRELLHREERLQKSMEA 330 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 ++ ++ + L++GY ++ + ++ I I DG+ Sbjct: 331 FLERKRQKYHLSLETVIHLNPMKILQKGYAVLR-KGGQRLRSLEEVSLHEEIEIQMMDGK 389 Query: 494 ANAIVINKA 502 A V K Sbjct: 390 ITAEVKEKK 398 >gi|317407683|gb|EFV87618.1| exodeoxyribonuclease 7 large subunit [Achromobacter xylosoxidans C54] Length = 255 Score = 236 bits (601), Expect = 9e-60, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 127/224 (56%), Gaps = 8/224 (3%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 +V++L+ + ++E ++ + VRGEIS + +SGH YF+LKD+ + + A++++G Sbjct: 39 ILTVAQLNQAVGQLLERSIPALWVRGEISNFT-QAASGHWYFTLKDSRAAVRAVMFRGRA 97 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + + F+P G + + +++ + YQ+ ++++ +G G L A + K++L EGLF Sbjct: 98 SAVGFVPRAGDQVEIRVRVSLYEPRGDYQLQVDAMRRAGIGNLYEAFLRLKEQLNAEGLF 157 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 K +P+ I V+TS A +RD+L ++ R P + VII+P VQG + +A Sbjct: 158 DPARKREPVPLPRAIGVVTSLHAAALRDVLSALARRAPQVPVIIYPAPVQGADAAGRLAA 217 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 I N E D ++L RGGGSIEDLW FNDE + R I Sbjct: 218 QIRLANARCE------VDTLLLVRGGGSIEDLWSFNDEALAREI 255 >gi|326776896|ref|ZP_08236161.1| Exodeoxyribonuclease 7 large subunit [Streptomyces cf. griseus XylebKG-1] gi|326657229|gb|EGE42075.1| Exodeoxyribonuclease 7 large subunit [Streptomyces cf. griseus XylebKG-1] Length = 411 Score = 236 bits (601), Expect = 9e-60, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 N+ V E+S + ++ L + V G+I+ +G + +L+D + Sbjct: 12 NTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 70 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ ++I + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 71 VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATDIRPVGIGELLVRLEQLKK 130 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P+++ ++ A RD+L+ R+P +R + VQG Sbjct: 131 SLAAEGLFALDRKKPLPFLPQLVGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 190 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L+E D+I++ARGGGS+EDL F+DE ++R +A P++ Sbjct: 191 NAVAQVVQAVEELDALQE------VDVIVVARGGGSVEDLLPFSDEQLIRTVAACRTPVV 244 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R + L+ + Sbjct: 245 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREE 304 Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L A+ + + +D L L ++ R +H + R+ S Sbjct: 305 RGLAHALGRPAMERPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSP 364 Query: 363 IHNIQK 368 +++ Sbjct: 365 AATLER 370 Score = 87.5 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 6/154 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407 ++ +++ +K + E+ + ++Q+ + LR + + L E Sbjct: 258 LVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREERGLAHALGRPAME 317 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + + L+ R +L H + + +S T + S + TL+RGY +Q Sbjct: 318 RPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSPAATLERGYAVLQR 377 Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVIN 500 + + + A + +G+ V Sbjct: 378 PDGHVVRSPGEAGAPGEPLRARVSEGEFTVRVDG 411 >gi|300934061|ref|ZP_07149317.1| exodeoxyribonuclease VII large subunit [Corynebacterium resistens DSM 45100] Length = 434 Score = 236 bits (601), Expect = 9e-60, Method: Composition-based stats. Identities = 96/373 (25%), Positives = 171/373 (45%), Gaps = 12/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59 M SQ+ + ++V +L+ +K +E L H+ V G+++ + +Y +L+D Sbjct: 1 MVSMSQQPNSADSPWAVHQLNVQVKQWIER-LGHIWVEGQVTQVNMKPTWKFSYITLRDV 59 Query: 60 -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + I TL + G ++ GK + G + + + + P G G LL Sbjct: 60 EQEMSVSVTINTSTLQNLPSPLRNGDRVVMYGKPAFYAGRGSFSLWVTQVKPVGIGELLA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ K+ L EGLF + K +PF+P+ + ++T A RD+L R+P ++ + Sbjct: 120 RIEQLKRALAAEGLFDSRLKASLPFLPRKVGLVTGRGSAAERDVLAVAHDRWPAVQFEVI 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG E+ A+ +L P D+II+ARGGGS+EDL F++E + R +A Sbjct: 180 NTAVQGANAVPEVIAALQKL------EANPDVDVIIVARGGGSVEDLLPFSEEALARQVA 233 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P++SAIGHE D + D+ ADLRA TPT AA+ VP + L +R ++ + Sbjct: 234 RMRTPVVSAIGHEPDNPVLDHVADLRAATPTDAAKRVVPDVAAELQYVAELRSRASSALR 293 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L + ++ L + R +D + L +I + Sbjct: 294 SWVSQERRRLKDIRTRPVMANPLLPVTAQRDLIDEAVHRKDRALHNVIRHLRSEIHSYKA 353 Query: 356 RIKSDFLIHNIQK 368 ++ + + + Sbjct: 354 QVNALGPSQTLAR 366 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 21/158 (13%), Positives = 53/158 (33%), Gaps = 7/158 (4%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q++ E + ++ + ++ K + + I + + R + Sbjct: 279 QYVAELRSRASSALRSWVSQER--RRLKDIRTRPVMANPLLPVTAQRDLIDEAVHRKDRA 336 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKTRI 485 L + I+ + + + + TL RGY+ + +D + +T ++A +++ Sbjct: 337 LHNVIRHLRSEIHSYKAQVNALGPSQTLARGYSIVQVVPRDGSGPQVVTSVEDVAPGSQL 396 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG 523 + DG A + P Q +G Sbjct: 397 RVRVPDGSITAATMGVNPAPGSEATPQQRQGLPPNNKG 434 >gi|182436267|ref|YP_001823986.1| exodeoxyribonuclease VII large subunit [Streptomyces griseus subsp. griseus NBRC 13350] gi|226697611|sp|B1W2D9|EX7L_STRGG RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|178464783|dbj|BAG19303.1| putative exoribonuclease large subunit [Streptomyces griseus subsp. griseus NBRC 13350] Length = 403 Score = 236 bits (601), Expect = 1e-59, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 170/366 (46%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 N+ V E+S + ++ L + V G+I+ +G + +L+D + Sbjct: 4 NTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ ++I + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 63 VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATDIRPVGIGELLVRLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P+++ ++ A RD+L+ R+P +R + VQG Sbjct: 123 SLAAEGLFALDRKKPLPFLPQLVGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L+E D+I++ARGGGS+EDL F+DE ++R +A P++ Sbjct: 183 NAVAQVVQAVEELDALQE------VDVIVVARGGGSVEDLLPFSDEQLIRTVAACRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R + L+ + Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREE 296 Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L A+ + + +D L L ++ R +H + R+ S Sbjct: 297 RGLAHALGRPAMERPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSP 356 Query: 363 IHNIQK 368 +++ Sbjct: 357 AATLER 362 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 6/154 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407 ++ +++ +K + E+ + ++Q+ + LR + + L E Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELERVQQLRDRALRTVRGLLDREERGLAHALGRPAME 309 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + + L+ R +L H + + +S T + S + TL+RGY +Q Sbjct: 310 RPHRLVDEREAEVDALLGRARRVLGHLLDRADSELSHTLARVVSLSPAATLERGYAVLQR 369 Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVIN 500 + + + A + +G+ V Sbjct: 370 PDGHVVRSPEEAGAPGEPLRARVSEGEFTVRVDG 403 >gi|319779518|ref|YP_004130431.1| Exodeoxyribonuclease VII large subunit [Taylorella equigenitalis MCE9] gi|317109542|gb|ADU92288.1| Exodeoxyribonuclease VII large subunit [Taylorella equigenitalis MCE9] Length = 438 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 113/356 (31%), Positives = 189/356 (53%), Gaps = 11/356 (3%) Query: 7 KNSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-RI 64 N+ P YSVSEL LK +++ + + V GEISG++ S GHAYF+LKD + + Sbjct: 17 SNTEPLPKVYSVSELLMDLKSTLKNFFTDIKVVGEISGFKIS-SVGHAYFNLKDENGEVV 75 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 + T + +G+ + G ++ + + Q+II + G GTL LE K Sbjct: 76 KCSRFNYTRIPQKTNLRDGLLVEITGSLSVYTKNGDVQLIISKIEEQGKGTLHEQLEALK 135 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQG 183 +KL EEG+F+ ++ P K + +++S A ++D+L ++ R P V+I+P VQG Sbjct: 136 RKLSEEGIFNKKNDLNPPKFVKSVGIVSSLGAAALKDVLTTLNRRTPFIDVVIYPSLVQG 195 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ P ++ A+ + ++++ D I+L RGGGSIEDLW FNDE + R I+ I Sbjct: 196 EQAPGQMITALEKADSMEH-------DAILLVRGGGSIEDLWAFNDESLARKISELKTYI 248 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I +GHE D++LAD A++ RAPTPT AAE+ K+ L L++ L +I I Sbjct: 249 ICGVGHEIDFSLADLASNHRAPTPTAAAEILSKSKDELNKDLVSKSDLLIKLIENYINNL 308 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 TL+ ++ L + + ++D L L+ + + + N+I + ++S Sbjct: 309 GQTLDYKMEMLISPQNLIKIQLSQVDGYKTSLNFALDKKLTKAQNYLNNIHSELRS 364 Score = 80.2 bits (196), Expect = 9e-13, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 53/150 (35%), Gaps = 2/150 (1%) Query: 351 NHIINRIKSDF--LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + + S LI I+ ++ + + +++ I ++ + L Sbjct: 284 DELNKDLVSKSDLLIKLIENYINNLGQTLDYKMEMLISPQNLIKIQLSQVDGYKTSLNFA 343 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 ++ ++ + + + + + + L+++ K L+RG+ + D+ Sbjct: 344 LDKKLTKAQNYLNNIHSELRSLFKFRFMEFRSIAKNLITSLKAYNPKGVLERGFALVYDS 403 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIV 498 + R++ + I F D A V Sbjct: 404 KGKLVKTARDVGDGELLKIEFADSAIRAQV 433 >gi|282865349|ref|ZP_06274401.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. ACTE] gi|282559822|gb|EFB65372.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. ACTE] Length = 413 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 164/366 (44%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 + V ++S + ++ L V V G+I+ +G + +L+D + Sbjct: 14 TTSPEAPLPVGDVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 72 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ ++I + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 73 VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATEIRPVGIGELLVRLEQLKK 132 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P++I ++ A RD+L+ R+P +R + VQG Sbjct: 133 SLAAEGLFALDRKRPLPFLPQLIGLVCGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 192 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ E P D+I++ARGGGS+EDL F+DE ++RA+A P++ Sbjct: 193 HAVNQVVQAVR------ELDGLPEVDVIVVARGGGSVEDLLPFSDEQLIRAVAACRTPVV 246 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R + LI + Sbjct: 247 SAIGHEPDSPLLDLVADLRASTPTDAAKKIVPDVGEELDRVQQLRDRALRTVRGLIDREE 306 Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L ++ + + +D L L ++ R H R+ + Sbjct: 307 RGLAHALGRSSMERPQRMVDEREAEVDALVGRSRRVLGHLLDRADSELAHTRARVVALSP 366 Query: 363 IHNIQK 368 +++ Sbjct: 367 AATLER 372 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 57/154 (37%), Gaps = 6/154 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407 ++ +++ +K + E+ ++Q+ + LR + + L E Sbjct: 260 LVADLRASTPTDAAKKIVPDVGEELDRVQQLRDRALRTVRGLIDREERGLAHALGRSSME 319 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + + + L+ R +L H + + ++ T + + + TL+RGY +Q Sbjct: 320 RPQRMVDEREAEVDALVGRSRRVLGHLLDRADSELAHTRARVVALSPAATLERGYAVLQR 379 Query: 468 TNNNFITQKRNL-ATKTRILINFFDGQANAIVIN 500 + + + + A + +G+ V Sbjct: 380 PDGHVVRSPADAGAPGGELRARVSEGEFTVRVEG 413 >gi|320008798|gb|ADW03648.1| exodeoxyribonuclease VII, large subunit [Streptomyces flavogriseus ATCC 33331] Length = 403 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 97/366 (26%), Positives = 165/366 (45%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 + V ++S + ++ L V V G+I+ +G + +L+D + Sbjct: 4 TTSPEAPLPVGDVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ ++I + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 63 VTCFRQVFDRIADVVTEGARVVVLAKPEWYAPRGQLSLRATEIRPVGIGELLVRLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P++I +++ A RD+L+ R+P +R + VQG Sbjct: 123 SLAAEGLFALDRKKPLPFLPQLIGLVSGRASAAERDVLENARRRWPAVRFEVRNTAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ E P D+I++ARGGGS+EDL F+DE ++RA+A P++ Sbjct: 183 HAVNQVVQAV------HELDGLPEVDVIVVARGGGSVEDLLPFSDEALIRAVAACRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D AD+RA TPT AA+ VP + L R + LI + Sbjct: 237 SAIGHEPDSPLLDLVADVRASTPTDAAKKVVPDVGEELDRVQQLRDRALRTVRGLIDREE 296 Query: 305 NTLNSL--LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L ++ + + +D L L ++ R H R+ + Sbjct: 297 RGLAHALGRSSMERPQRMVDEREAEVDALVGRSRRVLGHLLDRADSELAHTRARVVALSP 356 Query: 363 IHNIQK 368 +++ Sbjct: 357 AATLER 362 Score = 90.2 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 3/130 (2%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + + + V+ + + M E+ + + + L+ R +L Sbjct: 276 RVQQLRDRALRTVRGLIDREERGLAHALGRSSM--ERPQRMVDEREAEVDALVGRSRRVL 333 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL-ATKTRILINFF 490 H + + ++ T + + + TL+RGY +Q + + + + A + Sbjct: 334 GHLLDRADSELAHTRARVVALSPAATLERGYAVLQRPDGHVVRSPADAGAPGAELRARVS 393 Query: 491 DGQANAIVIN 500 +G+ V Sbjct: 394 EGEFTVRVAE 403 >gi|25027634|ref|NP_737688.1| exodeoxyribonuclease VII large subunit [Corynebacterium efficiens YS-314] gi|23492916|dbj|BAC17888.1| putative exodeoxyribonuclease, large subunit [Corynebacterium efficiens YS-314] Length = 447 Score = 235 bits (598), Expect = 2e-59, Method: Composition-based stats. Identities = 96/372 (25%), Positives = 168/372 (45%), Gaps = 12/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P S + V +++ +K+ +E L H+ V G+++ + +Y +L+D Sbjct: 33 TPVPSAKSTPDTPWPVRDVNNQVKNWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVE 91 Query: 62 SRIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + ++G +V GK + G + + + + P G G LL Sbjct: 92 QEVSVQLTCPTEIIRNRPTPLKDGDRVIVYGKPAFYAGRGSFSLWVTDIRPVGIGQLLAR 151 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ +++L EGLF K +PF+PK + +IT A RD+L R+P ++ + Sbjct: 152 IEELRRQLAAEGLFDPARKKRLPFLPKCVGLITGRGSAAERDVLSVARDRWPEVQFKVIN 211 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG EI A L E P D+II+ARGGGS+EDL F++E + RA+A Sbjct: 212 TAVQGASAVPEIIAA------LGELDQDPGVDVIIIARGGGSVEDLLPFSEEALQRAVAA 265 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SAIGHE D + D ADLRA TPT AA+ VP + + L R + Sbjct: 266 AQTPVVSAIGHEPDTPILDNVADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRG 325 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + L S+ L + + R ++R L ++ ++ + + + Sbjct: 326 WVAREQQALASIRTRPVLADPMTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQ 385 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 386 VSALGPSATLAR 397 Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 10/161 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E++ I Q+ + + + L +R + Sbjct: 287 ADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADP 346 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 I +++ ++ + ++H +++ + V+ + + TL RGY+ +Q Sbjct: 347 MTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLARGYSVVQVVP 406 Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + +T +++ I DG A +N Sbjct: 407 RDGTPPQVVTTIEQTPPGSQLRIRVADGAITAAAMNTQKSD 447 >gi|284043235|ref|YP_003393575.1| exodeoxyribonuclease VII large subunit [Conexibacter woesei DSM 14684] gi|283947456|gb|ADB50200.1| exodeoxyribonuclease VII, large subunit [Conexibacter woesei DSM 14684] Length = 457 Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats. Identities = 102/501 (20%), Positives = 188/501 (37%), Gaps = 62/501 (12%) Query: 8 NSLDHP-EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 P ++V + L+ + + V + GE+ +R ++ YF L+D + Sbjct: 12 PGSSLPGPFAVGVYADRLRAQL-RGFARVQIFGELWNFRTSRTT--VYFELRDPRGALPC 68 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS----KYQIIIESLIPSGSGTLLTALEK 122 +W+ + + P +G + +V G +PGS+ + L +G G LL +E+ Sbjct: 69 AMWRSDFDALGLEPSDGAQVVVAGGCDYYPGSATSSPSFSFRATDLRVAGEGDLLAQVER 128 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP-VKV 181 +K L EGL Q P P +P+ I V+T +G D+L + R +I+ V Sbjct: 129 LRKLLAAEGLLEPQKHLPRPLLPRTIGVVTGESGKARDDVLAGLRRRGWSGRLIWGFAPV 188 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 Q IA A+ L ++E D++I+ARGGGS+ DL+ F DE + R +A + Sbjct: 189 QDRHAAPAIAQALRDLAAIEE------VDVVIVARGGGSLADLFAFCDETLCRTVALLRV 242 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+I+++GH TD TL D A + TPT AA+ AV + + + E R + R Sbjct: 243 PVIASVGHHTDRTLIDDVAAVCCSTPTHAAQEAVQLDVAAARATLIRETRRLGLHGRRAV 302 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L + ++ R R Sbjct: 303 LDRARTLAGLA--RAPAEHVARHRRR---------------------------------- 326 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + ++ + + ++ ++ +L ++ Sbjct: 327 -----------LHQQLRELRASARRRGAREREVTATRLLVLRRRSTVVAAERTRADALLR 375 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 R+ + + L + TL+RGY ++ ++ +T Sbjct: 376 ADGERLRHTADAATARRARDLERLSLALAAHDPARTLERGYALVERSDGELVTSAEQARA 435 Query: 482 KTRILINFFDGQANAIVINKA 502 R+ + F DG A V ++ Sbjct: 436 AGRLDLRFHDGAVRATVEDEG 456 >gi|294782264|ref|ZP_06747590.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 1_1_41FAA] gi|294480905|gb|EFG28680.1| exodeoxyribonuclease VII, large subunit [Fusobacterium sp. 1_1_41FAA] Length = 404 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVC--VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + GEIS + SGH YFS+KD+ S+I + Sbjct: 2 EKVYSVSEFNRMVKSYIDDIDDFQDFYIEGEISNIT-YYKSGHLYFSVKDSKSQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 + +I +EG + G + + ++Q+++ + G L LEK K+K+ Sbjct: 61 NYKMKRIPEDLKEGDAIKLFGDVGFYEVKGEFQVLVRHIEKQNALGALFAKLEKVKEKMA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E+G F + HK +P PK I V+T+ TGA ++DI++ RF + + ++P KVQG Sbjct: 121 EKGYFDESHKKELPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYVYPAKVQGAGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D+II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDLIIAGRGGGSIEDLWAFNEEEVAMAFFNSEKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E++VP KE L SL + + L ++ ++ Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSVPEKESLIKSLDDKKIYLAKLLKSYLEDMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L N T++ R + L +++ + +K F I+++ I+ Sbjct: 295 SIRMDNYHLKNFPSTINNYRELIVEKEEILTKSIKDFLEQKRHLFEIKIDKVSVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYSVSQVKNKRID 370 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 48/163 (29%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + ++ I+ + + ++ + + ++ L Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSVPEKESLIKSLDDKKIYLAKLLKSYLEDMKRELS 295 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + I I + + + ++ I + NTL Sbjct: 296 IRMDNYHLKNFPSTINNYRELIVEKEEILTKSIKDFLEQKRHLFEIKIDKVSVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGY+ Q N I ++ + +G+ +IV K Sbjct: 356 KRGYSVSQVKNKR-IDVLEDVEVNDEMTTILKNGRLISIVKEK 397 >gi|237740655|ref|ZP_04571136.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 2_1_31] gi|229422672|gb|EEO37719.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. 2_1_31] Length = 404 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 119/376 (31%), Positives = 191/376 (50%), Gaps = 13/376 (3%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVC--VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + GEIS + SGH YFS+KD+ S+I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQDFYIEGEISNIT-YYKSGHLYFSVKDSKSQIKCAAF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLL 128 + +I +EG + G + + ++Q+++ + G L LEK K+K+ Sbjct: 61 NYKMKRIPEDLKEGDAIKLFGDVGFYEVKGEFQVLVRHIEKQNALGALFAKLEKVKEKMA 120 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 E+G F + HK +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG Sbjct: 121 EKGYFDESHKKELPRFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGLGAE 180 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 +EI I LN ++E D+II RGGGSIEDLW FN+E + A NS PIISA+ Sbjct: 181 QEIIKGIETLNKIEE------IDLIIAGRGGGSIEDLWAFNEEEVAMAFFNSEKPIISAV 234 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT- 306 GHE D+ L+D AD RA TPT A E+++P KE L SL + + L ++ ++ Sbjct: 235 GHEIDFLLSDLTADKRAATPTQAIELSIPEKESLIKSLDDKKIYLTKLLKSYLEDMKREL 294 Query: 307 -LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L N T++ R + L +++ + +K F I+++ I+ Sbjct: 295 SIRMDNYHLKNFPSTINNYRELMVEKEEILTKSIKDFLEQKRHLFEVKIDKVSVLNPINT 354 Query: 366 IQKNRQHILEKQQHIE 381 +++ K + I+ Sbjct: 355 LKRGYSVSQVKNKRID 370 Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats. Identities = 17/163 (10%), Positives = 48/163 (29%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + ++ I+ + + ++ + + ++ L Sbjct: 236 HEIDFLLSDLTADKRAATPTQAIELSIPEKESLIKSLDDKKIYLTKLLKSYLEDMKRELS 295 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + I + + + + ++ + + NTL Sbjct: 296 IRMDNYHLKNFPSTINNYRELMVEKEEILTKSIKDFLEQKRHLFEVKIDKVSVLNPINTL 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGY+ Q N I ++ + +G+ +IV K Sbjct: 356 KRGYSVSQVKNKR-IDVLEDVEVNDEMTTILKNGRLISIVKEK 397 >gi|302536635|ref|ZP_07288977.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. C] gi|302445530|gb|EFL17346.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. C] Length = 439 Score = 234 bits (597), Expect = 3e-59, Method: Composition-based stats. Identities = 101/394 (25%), Positives = 178/394 (45%), Gaps = 12/394 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 N+ V ++S + ++ L V V G+I+ +G + +L+D + Sbjct: 4 NTSADAPLPVGQVSRLIGGWIDR-LGQVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ +++ + EG +V+ K + + + + + P G G LL LE+ K+ Sbjct: 63 VTCFRQVWDEVADVVSEGARVVVLAKPEWYAPRGQLSLRVTEIRPVGIGELLARLERLKR 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLAAEGLFALDRKKPLPFLPQLIGLVVGRASAAERDVLENARRRWPAVRFEVRNVAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ P D+II+ARGGGS+EDL F+DE +VR +A + P++ Sbjct: 183 HAVPQVVQAVKELDAR------PDVDVIIVARGGGSVEDLLPFSDEEVVRTVAAARTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L+ R + L+ + Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELQRVRQLQERGLRALRGLLDREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + L+ L L ++ R H + R+ + Sbjct: 297 RGLAHALARPVFVHPRRMVEVREDELEALLARSRRTLGHLLDRADSELEHTLARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 +++ + H+ + + L + Sbjct: 357 AATLERGYAVLQRADGHVVRAASEVAEGEALRAR 390 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 5/179 (2%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ +K + E+ Q + Q+ ++ LR + + L + Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELQRVRQLQERGLRALRGLLDREERGLAHALARPVFV 309 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + ++ L+ R L H + + + T + + + TL+RGY +Q Sbjct: 310 HPRRMVEVREDELEALLARSRRTLGHLLDRADSELEHTLARVVALSPAATLERGYAVLQR 369 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQG 526 + + + +A + G V A P Q+ E T G Sbjct: 370 ADGHVVRAASEVAEGEALRARVAAGGFTVTVAGTAVPAGPSAAPPQVPEAALEGGSTAG 428 >gi|295395779|ref|ZP_06805967.1| exodeoxyribonuclease VII large subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294971314|gb|EFG47201.1| exodeoxyribonuclease VII large subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 437 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 177/371 (47%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + VS LS ++K +E +S V V G+I + + +Y +++D + Sbjct: 21 PATALETTPENPWPVSLLSKNIKRYIER-MSVVWVEGQIIEFNSRGRA--SYLTIRDLND 77 Query: 63 RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 +I ++ L+++E + G +V K + + + + P G G LL L Sbjct: 78 QISLPVQVFSDVLDRLETPVKAGDHVVVQLKANFWMKIGRLSMQARDIRPVGLGELLARL 137 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K+ L EGLF K PIPF+P I +IT +D+++ + R+P + + Sbjct: 138 ERLKRLLAAEGLFDPALKKPIPFLPTKIGLITGRNSDAEKDVIRNATLRWPSVEFDVINT 197 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +I A+ QL+ P D+II+ARGGGS+EDL F++E ++RA+A + Sbjct: 198 AVQGTGAVTQIIAALDQLDAR------PDVDVIIIARGGGSLEDLLPFSNESLIRAVAAA 251 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SAIGHE D + D ADLRA TPT AA+ VP ++ A + I+ R Sbjct: 252 KTPIVSAIGHEADRPILDEVADLRASTPTDAAKRVVPDFYQEVMDIMQARAVMTGILERF 311 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 I + L+S+ L N ++ + + I+ H+ +I Sbjct: 312 ITNEQKGLDSVRSRPVLANPHTIIATRAEEIADWRARAASLTKRILQHGNSTVEHLRTQI 371 Query: 358 KSDFLIHNIQK 368 ++ ++ + + Sbjct: 372 RALSPLNTLAR 382 Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 49/146 (33%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 ++ + Q +K + I I R Sbjct: 292 QEVMDIMQARAVMTGILERFITNEQKGLDSVRSRPVLANPHTIIATRAEEIADWRARAAS 351 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + ++ +++V +++ + NTL RGY +QDT+ + ++L+T ++ + Sbjct: 352 LTKRILQHGNSTVEHLRTQIRALSPLNTLARGYAIVQDTSGTAVRNTQDLSTGDKLTVTV 411 Query: 490 FDGQANAIVINKAPPKEQPTKKCQLH 515 G +A V P ++ + Sbjct: 412 EQGTFDATVTKIHPHRQTTPRSKDTP 437 >gi|257465865|ref|ZP_05630176.1| exodeoxyribonuclease VII large subunit [Fusobacterium gonidiaformans ATCC 25563] gi|315917022|ref|ZP_07913262.1| exodeoxyribonuclease VII large subunit [Fusobacterium gonidiaformans ATCC 25563] gi|313690897|gb|EFS27732.1| exodeoxyribonuclease VII large subunit [Fusobacterium gonidiaformans ATCC 25563] Length = 404 Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats. Identities = 114/389 (29%), Positives = 195/389 (50%), Gaps = 13/389 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y VS+ + +K +E N ++ + GE+SG + SGH YF LKD +S++ + Sbjct: 4 IYKVSDFNLKIKRYLEGNYEFKNMIIEGELSGVT-YYKSGHLYFQLKDENSQVKCAAFSY 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEE 130 I +EG + V + + +Q+++ + G + LEK KK++ E Sbjct: 63 QRRGISDDLQEGEKVRVFADVGFYENRGDFQLLVRGIEKQNTLGKMYADLEKLKKRMAAE 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G FS +HK +P PK+I V+T+ TGA ++DI++ I R P + V I+ KVQG +E Sbjct: 123 GYFSLEHKKTLPSYPKVIGVVTALTGAAVQDIIKTIRKRDPRIDVYIYSAKVQGTGAEQE 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I I LN + P D +I RGGGS+EDLW FN E + A +S PIISA+GH Sbjct: 183 IIAGIETLNRI------PEIDFLIAGRGGGSVEDLWAFNKEDVALAFYHSQKPIISAVGH 236 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN--TL 307 E D L+D+ AD+RA TPT A E++VP E + +L + + + K Sbjct: 237 EVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGKQSLLRKKQDLQK 296 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 S L + ++ + L +L+ N++ I+ RK + + ++ ++ ++ +Q Sbjct: 297 RSQNYYLQHFPKSFENYKRELMYREEQLQRNVKWILERKKQEHHLVLQKMIQLNPMNTLQ 356 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 K + +++ + + + +L+ + Sbjct: 357 KGYVILQREKKMLRSVEEINLKDEIEIRM 385 Score = 79.8 bits (195), Expect = 1e-12, Method: Composition-based stats. Identities = 18/174 (10%), Positives = 49/174 (28%), Gaps = 6/174 (3%) Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 + + + + +++ ++ + + + Q I+ + Sbjct: 225 HSQKPIISAVGHEVDILLSDFTADVRAATPTQAVELSVPELEQYYQEIQARYTKLQLLGK 284 Query: 393 LEKKEKIAILHML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 K L + + +++ + ++ + + Sbjct: 285 QSLLRKKQDLQKRSQNYYLQHFPKSFENYKRELMYREEQLQRNVKWILERKKQEHHLVLQ 344 Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + NTL++GY +Q + + K I I DG+ A V K Sbjct: 345 KMIQLNPMNTLQKGYVILQREK-KMLRSVEEINLKDEIEIRMIDGRIKAEVKEK 397 >gi|227548174|ref|ZP_03978223.1| exodeoxyribonuclease VII large subunit [Corynebacterium lipophiloflavum DSM 44291] gi|227079735|gb|EEI17698.1| exodeoxyribonuclease VII large subunit [Corynebacterium lipophiloflavum DSM 44291] Length = 416 Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 180/373 (48%), Gaps = 12/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M +Q S + V+ L+ +K +E L + V G+++ + +Y +L+D Sbjct: 1 MTQSTQSKSSPENPWPVARLNSTVKKWIER-LGWLWVEGQLTQINVKPTWKMSYLTLRDT 59 Query: 61 HSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 ++ + L + ++G +V+GK + + G + I I + G G LL Sbjct: 60 QEQVSVQLTAETSLLRSLATPLKDGDRVVVLGKPSFYAGRGSFSIYITDIRHVGEGELLA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +EK +++L EGLF K P+P++P + +IT A RD++ R+P ++ + Sbjct: 120 RIEKLRQQLAAEGLFDASRKQPLPYLPATVGLITGKGSAAERDVMSVAQSRWPAVKFRVI 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG E+ A+ QL+ D+II+ARGGGS+EDL F++E + RA+A Sbjct: 180 NTAVQGANATPEVIAALRQLDA------DDTVDVIIIARGGGSVEDLLPFSEEALQRAVA 233 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + P++SAIGHE D + D ADLRA TPT AA+ VP + AR+N + Sbjct: 234 AARTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDAAQEFLFVDEARARMNAALR 293 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 ++ + +T+ +L L N +L+ R + R + ++ ++ + + + + Sbjct: 294 GWVERERSTITALRSRPVLANPMTSLNQRRDEVQRAVALIRRDVRYLLREESAKVSALRS 353 Query: 356 RIKSDFLIHNIQK 368 ++ + + + Sbjct: 354 QVSALGPSATLAR 366 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 37/112 (33%), Gaps = 5/112 (4%) Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + +++ + I + + ++ VS + + TL Sbjct: 305 ALRSRPVLANPMTSLNQRRDEVQRAVALIRRDVRYLLREESAKVSALRSQVSALGPSATL 364 Query: 459 KRGYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 RGY + +D + +T +++ I DG A ++ +P Sbjct: 365 ARGYAVVQVLPRDGSGPEVVTTIEQSPPGSQLRIRVADGSITAAAMSSSPAD 416 >gi|289769365|ref|ZP_06528743.1| exodeoxyribonuclease VII, large subunit [Streptomyces lividans TK24] gi|289699564|gb|EFD66993.1| exodeoxyribonuclease VII, large subunit [Streptomyces lividans TK24] Length = 402 Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 12/382 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSR 63 NS V E+S + ++ L V V G+I+ +G + +L+D Sbjct: 2 AANSTPESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDIS 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + ++ + + + EG +V K + + + + P G G LL LE+ Sbjct: 61 VSVTCYRQVFDAVADVVGEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARLEQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 KK L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQ Sbjct: 121 KKALAREGLFAAERKQPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G ++ A+ +L+ D+I++ARGGGS+EDL F+DE +VRA+A P Sbjct: 181 GVHAVPQVVQAVKELDAR------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D L D ADLRA TPT AA+ VP + L R + + Sbjct: 235 VVSAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAAFVDR 294 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L L + + + + ++ L +L + R H R+ + Sbjct: 295 EERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHLDRADSELTHTHARVVAL 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQ 382 +++ + H + Sbjct: 355 SPAATLKRGYAVLQRADGHAVR 376 Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 3/124 (2%) Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + + + F++++E+ A+ + I + L+ R L H + Sbjct: 278 RLLRDRARRCVAAFVDREERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHL 337 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + ++ T + + + TLKRGY +Q + + + + + +G + Sbjct: 338 DRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRDPGEVEPGETLRARVSEGDFS 397 Query: 496 AIVI 499 V Sbjct: 398 VRVD 401 >gi|325519975|gb|EGC99217.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. TJI49] Length = 236 Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats. Identities = 76/238 (31%), Positives = 131/238 (55%), Gaps = 10/238 (4%) Query: 2 NPFSQKNSLD--HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 +PF+ + VS L+ + ++E + + + GE+S + +SGH YFS+KD Sbjct: 5 SPFAAPGATRGGDEVIPVSALNRAISTMLERSFPLLWISGEVSNFT-RAASGHWYFSIKD 63 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +++ ++++G EF P EG V +T + + Q+ +E++ +G G L A Sbjct: 64 QQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRLYEA 123 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 + K +L EGLF+ + + P+P P+ I ++TS A +RD+L ++ R P + VI++P Sbjct: 124 FLRLKAQLEAEGLFAPERRRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVIVYP 183 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 VQG +++ A+ N +E D++++ RGGGSIEDLW FNDE + RAI Sbjct: 184 APVQGAGAAEKLVAAVQTANARRE------VDVLLVCRGGGSIEDLWSFNDEALARAI 235 >gi|282850209|ref|ZP_06259588.1| exodeoxyribonuclease VII, large subunit [Veillonella parvula ATCC 17745] gi|282579702|gb|EFB85106.1| exodeoxyribonuclease VII, large subunit [Veillonella parvula ATCC 17745] Length = 407 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 116/362 (32%), Positives = 172/362 (47%), Gaps = 14/362 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++++L+ +K ++ L +V V G I + HSSGH YFSLKD S ID +W Sbjct: 3 VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61 Query: 72 TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ V + + + +I + L + K++L Sbjct: 62 TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGAKSPLQLEFDALKRELTA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F D HK +P++ I ++TS +GAV+ DIL R P ++ +F V VQG Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I P D+II+ RGGGS+EDLW FND +V AI N+ PIISA+G Sbjct: 182 IIAKGIAT------ADADPDIDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL DY AD R TP+ AAEMAV LQ L EA L+ I ++ K L Sbjct: 236 HETDYTLCDYVADARGATPSHAAEMAVLPITTLQDQLKEKEAYLHEYISYTLQQKRTDLT 295 Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L + L L + L + + + + +++S + + Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMM 355 Query: 367 QK 368 K Sbjct: 356 IK 357 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415 H + I Q +++ YI ++K L +L + + Sbjct: 253 TPSHAAEMAVLPITTLQDQLKEKEAYLHEYISYTLQQKRTDLTLLFNRKLGIPALQFLHK 312 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 +H+++L + + + S+++ + L+S + +G+ ++ +N IT Sbjct: 313 QKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMMIKGFAKVEH-DNKPITS 371 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 L I + DG A V K Sbjct: 372 VAQLQPNDDIQVTLADGYITATVKEAHKDGRITKK 406 >gi|213585643|ref|ZP_03367469.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 344 Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats. Identities = 112/395 (28%), Positives = 169/395 (42%), Gaps = 56/395 (14%) Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP 171 G G L E+ K KL EGLF QHK P+P + VITS TGA + DIL + R P Sbjct: 1 GEGLLQQKYEQLKAKLHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDP 60 Query: 172 -LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 L VII+P VQGD+ P +I AI NT E D++I+ RGGGS+EDLW FNDE Sbjct: 61 SLPVIIYPTAVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFNDE 114 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 + RAI S IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + Sbjct: 115 RVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQ 174 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYR 348 RL + + + + L L +R + +RL + + LE I + + Sbjct: 175 RLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQ 234 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + R+ I + + I + + Sbjct: 235 RQQRVSQRLSQQNPQPRIHRVQSRIQQLEYR----------------------------- 265 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + + ++ L++ + TL RGYT T Sbjct: 266 ------------------LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTT 307 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + + + + DG + V + P Sbjct: 308 DGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 342 >gi|50365147|ref|YP_053572.1| exodeoxyribonuclease VII large subunit [Mesoplasma florum L1] gi|81827304|sp|Q6F1D5|EX7L_MESFL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|50363703|gb|AAT75688.1| exodeoxyribonuclease VII large subunit [Mesoplasma florum L1] Length = 404 Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats. Identities = 122/380 (32%), Positives = 189/380 (49%), Gaps = 11/380 (2%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +++ +SV+E+S K +E + ++ VRGE+ SGH YFSLKDN S I A+ Sbjct: 1 MENKIFSVAEISQIFKEAIEGSNYFKNIYVRGEVGNLTFN-KSGHVYFSLKDNQSTIAAM 59 Query: 68 IWKGTLNKI-EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 IWK +K+ +EG+E G++T + S + + G G L E+R K+ Sbjct: 60 IWKSNAHKLTNLNVKEGMEITCYGRLTYYVPSGRVSFEAVDVSVEGKGDLQEIFEERLKE 119 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 + G + K PI K I +IT+ +GA I+D++ + R P + + +FP VQG+ Sbjct: 120 ITALGWTDESRKKPINRFAKNIGLITTDSGAAIKDLITTLKRRMPSVNIYLFPTMVQGET 179 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +IAN I Q N + P+ DI+I+ RGGGS EDLW FN+ +++AI +SSIP+IS Sbjct: 180 AKFDIANKIQQANLFE-----PKLDILIVGRGGGSYEDLWTFNEMKVLKAIVDSSIPVIS 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 A+GHE D TL+DY ADLRA TPT AAE+A E L L + + + Sbjct: 235 AVGHEPDITLSDYVADLRAATPTAAAELASISTEELLKELAYNYENQIRLFKNVYNNQQL 294 Query: 306 T-LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + + + L+ + + +N+ II R +I ++ Sbjct: 295 KIEEFKKQNILKINNKYDLQSLDLNYIEKSFINNINNIISRNEMFIENIESKTALLDPKK 354 Query: 365 NIQKNRQHILEKQQHIEQIV 384 + K I+ K + I V Sbjct: 355 PLDKGFGLIMSKDKQIINSV 374 Score = 64.4 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 14/167 (8%), Positives = 44/167 (26%), Gaps = 4/167 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + +++ + E + + + +R + + Sbjct: 238 HEPDITLSDYVADLRAATPTAAAELASISTEELLKELAYNYENQIRLFKNVYNNQQLKIE 297 Query: 404 MLREQTKNRIFYLHT----HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 ++Q +I + + + +++ I + K L Sbjct: 298 EFKKQNILKINNKYDLQSLDLNYIEKSFINNINNIISRNEMFIENIESKTALLDPKKPLD 357 Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 +G+ I + I + I + DG+ I+ + Sbjct: 358 KGFGLIMSKDKQIINSVDKVDINQEIKLVLKDGEIETIIKGVKKHGK 404 >gi|294631175|ref|ZP_06709735.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. e14] gi|292834508|gb|EFF92857.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. e14] Length = 402 Score = 233 bits (594), Expect = 6e-59, Method: Composition-based stats. Identities = 101/380 (26%), Positives = 168/380 (44%), Gaps = 12/380 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 ++ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 STSPEAPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYNISVG 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG LV K + + + + P G G LL LE+ KK Sbjct: 63 VTCYREVFDAVADVVGEGARVLVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 NLAAEGLFAPERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ E D+I++ARGGGS+EDL F+DE +VRA+A P++ Sbjct: 183 HAVTQVVQAVK------ELDEIEDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L DY ADLRA TPT AA+ VP + L R ++ + Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEYERVRQLRDRARRCAQAHVEREE 296 Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + + L L ++ R H R+ + Sbjct: 297 RGLAHALARPCMEDPHRMIDERADHVAALLDRGRRTLRHLLDRADSELAHTHARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQ 382 +++ + H+ + Sbjct: 357 AATLRRGYAVLQRADGHVVR 376 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 45/132 (34%), Gaps = 2/132 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + + + H+ +A E I H+ L+ R Sbjct: 272 EEYERVRQLRDRARRCAQAHVEREERGLAHALAR--PCMEDPHRMIDERADHVAALLDRG 329 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L H + + ++ T + + + TL+RGY +Q + + + + + Sbjct: 330 RRTLRHLLDRADSELAHTHARVVALSPAATLRRGYAVLQRADGHVVRDPAEVTADEALRA 389 Query: 488 NFFDGQANAIVI 499 +G+ V Sbjct: 390 RVAEGEFTVRVD 401 >gi|294793722|ref|ZP_06758859.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 3_1_44] gi|294455292|gb|EFG23664.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 3_1_44] Length = 407 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 115/362 (31%), Positives = 172/362 (47%), Gaps = 14/362 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++++L+ +K ++ L +V V G I + HSSGH YFSLKD S ID +W Sbjct: 3 VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61 Query: 72 TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ V + + + +I + L + K++L Sbjct: 62 TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGAKSPLQLEFDALKRELTA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F D HK +P++ I ++TS +GAV+ DIL R P ++ +F V VQG Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I P D+II+ RGGGS+EDLW FND +V AI N+ PIISA+G Sbjct: 182 IIAKGIAT------ADADPDIDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL DY AD+R TP+ AAEMAV LQ L E L+ I ++ K L Sbjct: 236 HETDYTLCDYVADVRGATPSHAAEMAVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLT 295 Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L + L L + L + + + + +++S + + Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMM 355 Query: 367 QK 368 K Sbjct: 356 IK 357 Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415 H + I Q + + + YI ++K L +L + + Sbjct: 253 TPSHAAEMAVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRKLGIPALQFLHK 312 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 +H+++L + + + S+++ + L+S + +G+ ++ +N IT Sbjct: 313 QKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMMIKGFAKVEH-DNKPITS 371 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 L I + DG A V K Sbjct: 372 VAQLQPNDDIRVTLADGYITATVKEAHKDGRITKK 406 >gi|269797980|ref|YP_003311880.1| exodeoxyribonuclease VII large subunit [Veillonella parvula DSM 2008] gi|269094609|gb|ACZ24600.1| exodeoxyribonuclease VII, large subunit [Veillonella parvula DSM 2008] Length = 407 Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats. Identities = 114/362 (31%), Positives = 170/362 (46%), Gaps = 14/362 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++++L+ +K ++ L +V V G I + HSSGH YFSLKD S ID +W Sbjct: 3 VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61 Query: 72 TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ V + + + +I + L + K++L Sbjct: 62 TVMQKGLANAIQNGLLVTVKASVNFYNKIGRLNLIASDMQIGAKSPLQLEFDALKRELTA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F D HK +P++ I ++TS +GAV+ DIL R P ++ +F V VQG Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I P D+II+ RGGGS+EDLW FND +V AI N+ PIISA+G Sbjct: 182 IIAKGIAT------ADADPDIDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL DY AD R TP+ A EMAV LQ L E L+ I ++ K L Sbjct: 236 HETDYTLCDYVADARGATPSHATEMAVLPITTLQDQLTEKEEYLHEYIRYTLQQKRTDLT 295 Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L + L L + L + + + + +++S + + Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAEGHSLALLAQQLESLNPLQMM 355 Query: 367 QK 368 K Sbjct: 356 IK 357 Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415 H + I Q + + + YI ++K L +L + + Sbjct: 253 TPSHATEMAVLPITTLQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRKLGIPALQFLHK 312 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 +H+++L + + + S+++ + L+S + +G+ ++ +N IT Sbjct: 313 QKSHLQELSQTLTNATKERCNAEGHSLALLAQQLESLNPLQMMIKGFAKVEY-DNKPITS 371 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 L I + DG A V K Sbjct: 372 VAQLQPNDDIRVTLADGYITATVKEAHKDGRITKK 406 >gi|297157568|gb|ADI07280.1| exodeoxyribonuclease VII large subunit [Streptomyces bingchenggensis BCW-1] Length = 414 Score = 232 bits (592), Expect = 9e-59, Method: Composition-based stats. Identities = 102/366 (27%), Positives = 165/366 (45%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 12 NTSAETPIPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISLT 70 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ +K+ EG +V K + + + + P G G LL LE KK Sbjct: 71 VTCFRAVFDKVADTVTEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLELLKK 130 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 131 SLAAEGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARLRWPAVRFEVRNVAVQGV 190 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L P D+II+ARGGGS+EDL F+DE +VRA+A + P++ Sbjct: 191 HAVPQVVEAVQELDAL------PEVDLIIVARGGGSVEDLLPFSDEQLVRAVAACATPVV 244 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R L+ + Sbjct: 245 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELLRIQQLRERALRSARGLLDREE 304 Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + + + ++ L L ++ R H R+ + Sbjct: 305 RGLAAALARPCMRQPHRMVDERAEQIAGLLDRGRRCLGHLLDRADSELTHTHARVVALSP 364 Query: 363 IHNIQK 368 +++ Sbjct: 365 AATLRR 370 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 53/150 (35%), Gaps = 5/150 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK-----IAILHMLRE 407 ++ +++ +K + E+ I+Q+ ++ LR + A+ Sbjct: 258 LVADLRASTPTDAAKKVVPDVGEELLRIQQLRERALRSARGLLDREERGLAAALARPCMR 317 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 Q + I L+ R L H + + ++ T + + + TL+RGY +Q Sbjct: 318 QPHRMVDERAEQIAGLLDRGRRCLGHLLDRADSELTHTHARVVALSPAATLRRGYAVLQR 377 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAI 497 + + ++ + +G+ Sbjct: 378 ADGAVVRAAAEVSEDEELRARVAEGEFTVR 407 >gi|75906487|ref|YP_320783.1| exodeoxyribonuclease VII large subunit [Anabaena variabilis ATCC 29413] gi|75700212|gb|ABA19888.1| Exodeoxyribonuclease VII large subunit [Anabaena variabilis ATCC 29413] Length = 427 Score = 232 bits (592), Expect = 9e-59, Method: Composition-based stats. Identities = 118/361 (32%), Positives = 188/361 (52%), Gaps = 15/361 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70 SVS L+ +L+ ++E + L V V GE+S H SG +F+L+D + I ++W Sbjct: 30 LSVSGLTDYLRLLLEDDEQLRQVWVVGEVSSANH-HRSG-LFFTLQDPDGTAAIKCVVWN 87 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + K+ LP G + +V+G I +P +YQ+ + IP+G G ++ K +LL E Sbjct: 88 SQVPKLAQLPIAGEQLIVLGSIRLYPQRGEYQLSVWQAIPAGVGLQALRYQQLKNRLLAE 147 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF Q K +P P+ IAV+TSPT A DI + + R+P L V+ P VQG++ P+ Sbjct: 148 GLFDPQRKRSLPIHPQTIAVVTSPTAAAWGDIQKTLKHRYPGLHVLFSPATVQGEQAPES 207 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++ R +++IL+RGGG++E+L FNDE +VRA+A SIP+++ IGH Sbjct: 208 IVKAIARV------EKDGRAEVLILSRGGGAVEELACFNDERVVRAVAECSIPVVTGIGH 261 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D +L D AAD+ TPT AAE VP L + L+ +++ N L + Sbjct: 262 QRDESLVDLAADVCVHTPTAAAEKVVPSLAELYNQHCQRVIALHQVLLHTQTSAENQLQT 321 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L N D+ L +L+ + L + +H + ++ S +Q Sbjct: 322 LRNRLQNLRLDRHLQQEAQKLNWQRQRLWQLTMGRSQQAKQHLELLRQKLSSLDPKAVLQ 381 Query: 368 K 368 + Sbjct: 382 R 382 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 49/164 (29%), Gaps = 5/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ + + +K + E Q V + + + L Sbjct: 261 HQRDESLVDLAADVCVHTPTAAAEKVVPSLAELYNQHCQRVIALHQVLLHTQTSAENQLQ 320 Query: 404 MLREQTKN-----RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 LR + +N + + R+ + + + + + + L S K L Sbjct: 321 TLRNRLQNLRLDRHLQQEAQKLNWQRQRLWQLTMGRSQQAKQHLELLRQKLSSLDPKAVL 380 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 +RGY ++ N LA + I G+ A VI Sbjct: 381 QRGYAVVKQENGAIARSADELAVGNELFIQLAQGEVKAKVIEVK 424 >gi|302330438|gb|ADL20632.1| exodeoxyribonuclease VII large subunit [Corynebacterium pseudotuberculosis 1002] Length = 413 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + S + V EL+ +K +E L H+ V G+I+ S +Y +L+D + Sbjct: 1 MASSPSAPEHAWPVRELNAKVKGWIEK-LGHLWVEGQITQLNVKPSWKFSYITLRDPEAE 59 Query: 64 IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + +G +V GK + G + + + + P G G LL +E Sbjct: 60 ASVQLTCPTQLIRSLTTPLADGDRVVVYGKPAFYTGRGSFSLWVTDIRPVGIGELLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + +++L +EGLF K P+PF+P+ I +IT A RD+L R+P + + Sbjct: 120 RLRQQLAQEGLFDAHLKRPLPFLPRNIGLITGRGSAAERDVLAVAQSRWPEVTFTVRNTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG I +A+ QL+ P D+II+ARGGGS+EDL F++E + RA+A ++ Sbjct: 180 VQGARAVTGIISALEQLDA------DPTVDVIIIARGGGSVEDLLPFSEESLQRAVAAAT 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP + + L +R + + Sbjct: 234 TPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVIAERELIAELRSRSAAALRSWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + + + +L L + + L+R+ + + + + + ++ Sbjct: 294 QREHHMIQALRSRPVLADPLSMVQSHTEDLNRMLASIRKEITYQLNNERSVIGALRGQVS 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPAATLAR 363 Score = 77.9 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 48/142 (33%), Gaps = 7/142 (4%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ I E + ++ ++ + + + + + +++ I Sbjct: 274 ERELIAELRSRSAAALRSWVQREHHMIQ--ALRSRPVLADPLSMVQSHTEDLNRMLASIR 331 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLATKT 483 +++++ + + + + + TL RGY +Q + +T + Sbjct: 332 KEITYQLNNERSVIGALRGQVSALGPAATLARGYAVVQVLPRDGTPPEVVTTIDQSPPGS 391 Query: 484 RILINFFDGQANAIVINKAPPK 505 ++ I DG A + +P Sbjct: 392 QLRIRVSDGSITAASMQTSPAD 413 >gi|21223429|ref|NP_629208.1| exodeoxyribonuclease VII large subunit [Streptomyces coelicolor A3(2)] gi|14194722|sp|Q9FBM3|EX7L_STRCO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|9967683|emb|CAC05901.1| putative exoribonuclease large subunit [Streptomyces coelicolor A3(2)] gi|195729447|gb|ACG50791.1| ExA [Streptomyces coelicolor A3(2)] gi|195729471|gb|ACG50792.1| ExA [Streptomyces coelicolor A3(2)] Length = 402 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 169/382 (44%), Gaps = 12/382 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSR 63 NS V E+S + ++ L V V G+I+ +G + +L+D Sbjct: 2 AANSTPEGPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDIS 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + ++ + + + EG +V K + + + + P G G LL LE+ Sbjct: 61 VSVTCYRQVFDAVADVVGEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARLEQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 KK L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQ Sbjct: 121 KKALAREGLFAAERKQPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G ++ A+ +L+ D+I++ARGGGS+EDL F+DE +VRA+A P Sbjct: 181 GVHAVPQVVQAVKELDAR------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D L D ADLRA TPT AA+ VP + L R + + Sbjct: 235 VVSAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAAFVDR 294 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L L + + + + ++ L +L + R H R+ + Sbjct: 295 EERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHLDRADSELTHTHARVVAL 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQ 382 +++ + H + Sbjct: 355 SPAATLKRGYAVLQRADGHAVR 376 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 3/124 (2%) Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + + + F++++E+ A+ + I + L+ R L H + Sbjct: 278 RLLRDRARRCVAAFVDREERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHL 337 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + ++ T + + + TLKRGY +Q + + + + + +G + Sbjct: 338 DRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRDPGEVEPGETLRARVSEGDFS 397 Query: 496 AIVI 499 V Sbjct: 398 VRVD 401 >gi|167737457|ref|ZP_02410231.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 14] Length = 233 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 8/220 (3%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P P+ I ++TS A +RD+L ++ R P + VI++P VQG +++A + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTLARRAPHVPVIVYPAPVQGAGAAEKLAAMV 199 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 N +E D++I+ RGGGSIEDLW FNDE + R Sbjct: 200 ATANARRE------VDVLIVCRGGGSIEDLWSFNDEALAR 233 >gi|160947154|ref|ZP_02094321.1| hypothetical protein PEPMIC_01086 [Parvimonas micra ATCC 33270] gi|158446288|gb|EDP23283.1| hypothetical protein PEPMIC_01086 [Parvimonas micra ATCC 33270] Length = 399 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 117/371 (31%), Positives = 188/371 (50%), Gaps = 13/371 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 + V E+S ++ +++ + LS++ V GE+S ++ S GH+YFS+KD+ + + +++K Sbjct: 4 FKVKEVSKYISNVLRRDSFLSNISVEGEVSNFKK--SGGHSYFSIKDDEAMLKCVVFKTI 61 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +G + +V G + T+ S YQI+ +++ G G L K+KL +EGL Sbjct: 62 PIAQSLNLTDGQKVVVTGTVMTYEKGSYYQILCKNVEEVGRGNLYEQFLALKEKLSKEGL 121 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F+ + K PIP PK I V+T+ GA IRDIL + R+ + + +P KVQG EIA Sbjct: 122 FNSELKKPIPKFPKNIGVVTAKNGAAIRDILNTLRRRYRIANIYFYPAKVQGIGASDEIA 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + L++L D II+ RGGGS EDL FNDE ++R I N P+ISA+GHE Sbjct: 182 LGVKYLDSL------DFIDTIIVGRGGGSFEDLNAFNDENLIRTIFNCKKPVISAVGHEI 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D L DY AD RA TPT AE++ + ++ L E +LN I+ I + L Sbjct: 236 DTMLTDYVADKRAATPTAGAELSSVSMDEIKEFLNQAEKKLNKNILEEISAEKVQLEHFK 295 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 K L N ++ + L+ L + L+ + I + + ++ + + Sbjct: 296 KELEYYNPANRITTLKENLENLKKSLDEKIVSIFKYNKQLLDFKRQSLEIINPNSILDRG 355 Query: 370 RQHILEKQQHI 380 I + I Sbjct: 356 YSIIYNDKNEI 366 Score = 88.7 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 16/136 (11%), Positives = 52/136 (38%), Gaps = 2/136 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + ++ + + ++ + + + + + ++ + L NRI L +++ L Sbjct: 262 MDEIKEFLNQAEKKLNKNILEEISAEKVQLEHFKKELEY--YNPANRITTLKENLENLKK 319 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 ++ + K + + L+ + L RGY+ I + N + + + + Sbjct: 320 SLDEKIVSIFKYNKQLLDFKRQSLEIINPNSILDRGYSIIYNDKNEIVKDIKTVNVGDSL 379 Query: 486 LINFFDGQANAIVINK 501 + +G+ + V Sbjct: 380 KLKVSNGEIISDVKEI 395 >gi|300858159|ref|YP_003783142.1| exodeoxyribonuclease large subunit [Corynebacterium pseudotuberculosis FRC41] gi|300685613|gb|ADK28535.1| exodeoxyribonuclease large subunit [Corynebacterium pseudotuberculosis FRC41] gi|302205881|gb|ADL10223.1| exodeoxyribonuclease VII large subunit [Corynebacterium pseudotuberculosis C231] gi|308276116|gb|ADO26015.1| exodeoxyribonuclease VII large subunit [Corynebacterium pseudotuberculosis I19] Length = 413 Score = 232 bits (592), Expect = 1e-58, Method: Composition-based stats. Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + S + V EL+ +K +E L H+ V G+I+ S +Y +L+D + Sbjct: 1 MASSPSAPEHAWPVRELNAKVKGWIEK-LGHLWVEGQITQLNVKPSWKFSYITLRDPEAE 59 Query: 64 IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + +G +V GK + G + + + + P G G LL +E Sbjct: 60 ASVQLTCPTQLIRSLTTPLADGDRVVVYGKPAFYTGRGSFSLWVTDIRPVGIGELLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + +++L +EGLF K P+PF+P+ I +IT A RD+L R+P + + Sbjct: 120 RLRQQLAQEGLFDAHLKRPLPFLPRNIGLITGRGSAAERDVLAVAQSRWPEVTFTVRNTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG EI +A+ QL+ P D+II+ARGGGS+EDL F++E + RA+A ++ Sbjct: 180 VQGARAVTEIISALEQLDA------DPTVDVIIIARGGGSVEDLLPFSEESLQRAVAAAT 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP + + L +R + + Sbjct: 234 TPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVIAERELIAELRSRSAAALRSWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + + + +L L + + L+R+ + + + + + ++ Sbjct: 294 QREHHMIQALRSRPVLADPLSMVQSHTEDLNRMLASIRKEITYQLNNERSVIGALRGQVS 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPAATLAR 363 Score = 77.5 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 48/142 (33%), Gaps = 7/142 (4%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ I E + ++ ++ + + + + + +++ I Sbjct: 274 ERELIAELRSRSAAALRSWVQREHHMIQ--ALRSRPVLADPLSMVQSHTEDLNRMLASIR 331 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLATKT 483 +++++ + + + + + TL RGY +Q + +T + Sbjct: 332 KEITYQLNNERSVIGALRGQVSALGPAATLARGYAVVQVLPRDGTPPEVVTTIDQSPPGS 391 Query: 484 RILINFFDGQANAIVINKAPPK 505 ++ I DG A + +P Sbjct: 392 QLRIRVSDGSITAASMQTSPAD 413 >gi|210631281|ref|ZP_03296843.1| hypothetical protein COLSTE_00728 [Collinsella stercoris DSM 13279] gi|210160106|gb|EEA91077.1| hypothetical protein COLSTE_00728 [Collinsella stercoris DSM 13279] Length = 407 Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats. Identities = 109/449 (24%), Positives = 179/449 (39%), Gaps = 55/449 (12%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGI-HSSGHAYFSLKDNH 61 P + + SVS+ + + + V GE++G+RG SGH YF +KD Sbjct: 12 PAPPSAAGEDDALSVSQAAELAAGALHGV-PKITVLGEVTGFRGPNARSGHCYFQIKDES 70 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + +D I+WKGT +K F +G++ L G + + K S +G G L + Sbjct: 71 AALDCIVWKGTYDKRAFDLRDGLQVLFTGTFDLYKPTGKMSFKASSFTLAGEGLLRQQVA 130 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++L EGL + K IP +AV+TS +GAV+ D+ + + R P + VI K Sbjct: 131 QLAERLRREGLMEPERKRRIPVFCTRVAVVTSLSGAVVNDVKRTLRRRNPLVEVICVGAK 190 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ P E+ + + + P PD I+L RGGGS EDL FNDE + RA+A Sbjct: 191 VQGEGAPAELIEGLRRAAAI-----TPAPDCILLVRGGGSFEDLMTFNDEELARAVAACP 245 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 +P+++ IGHE D ++ D +D R TPT AAE P L + L E RL + + Sbjct: 246 VPVVTGIGHEPDNSICDMVSDRRCSTPTAAAESVAPEFAELVNVLDMREQRLQRSLSAIT 305 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 L+ L ++ R +R Sbjct: 306 SSAAADLDGRAARLGR---------------------ATSALLGRFSLAIEGYASRPCLA 344 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 H + + R + + Q + + Sbjct: 345 DPAHVVDRRRAELAQTSDRFAQACD-------------------------RSLERHAASL 379 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449 +++ R+ + + ++ + T L Sbjct: 380 ERMAPRLVGSTTG-LARKRHALDLATSQL 407 >gi|228470079|ref|ZP_04054988.1| exodeoxyribonuclease VII, large subunit [Porphyromonas uenonis 60-3] gi|228308217|gb|EEK17072.1| exodeoxyribonuclease VII, large subunit [Porphyromonas uenonis 60-3] Length = 494 Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats. Identities = 100/511 (19%), Positives = 192/511 (37%), Gaps = 62/511 (12%) Query: 15 YSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLKDN------------- 60 Y+++EL L+ ++ + + V GE+SGYRG GH YF+L D Sbjct: 11 YTLTELLGSLQRCIDHYYNRLYYVTGEVSGYRGRSQRGHCYFNLIDKVSDPLHPEAGGGE 70 Query: 61 -HSRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 ++I A+IW N+I +GI+ L + ++ + Q+ I+ + PS Sbjct: 71 LSAQISAVIWASRYNQIAQHFQQVTGQPLTDGIKILALVELK-YDPRYGLQLDIQDIDPS 129 Query: 112 -GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170 G + + + L GL ++P+P + IA+I+SPT A +D + + Sbjct: 130 YTLGEVARQRRETLQLLERMGLMERNKQHPMPRPLRRIAIISSPTAAGYQDFTRHLEESA 189 Query: 171 PLRVI---IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227 I +F +QG P+ I A+ ++ + D++++ RGGG+ DL F Sbjct: 190 VAPFIEKALFRATMQGKSAPQSIVAALERVRQHET-----LFDLVVIIRGGGATADLGTF 244 Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 +D + RA+A S+P+ S IGH+ D ++ D + TPT A + + L Sbjct: 245 DDFGVARAVAEFSLPVWSGIGHDRDESVVDLVSHRAFKTPTAVATAVIDAWCAEYTLLEE 304 Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 RL + + L Q L + L + Sbjct: 305 AHQRLERSWLEARQTAQ-------TGLERLAQLLRQTTLEQLHREERQMLLLREQLSVSP 357 Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF-LEKKEKIAILHMLR 406 R H + + ++ R+ + +++ + + + L + + L Sbjct: 358 RTLLHNQHTL--------LESQRERLAGAARYLPKSYRHEWDTLLSLFRHRYASYLTAQL 409 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 + + R L + T + +I+++ + L+RGY + Sbjct: 410 NEWQARQQSLQEK------------RKITTTQRTQIEHLAQIIRAMDPQTVLQRGYAIVH 457 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAI 497 + + L I + +G +A Sbjct: 458 HK-GDLVKSPSQLREGDDIELRLAEGTLSAT 487 >gi|32129527|sp|Q8FQP1|EX7L_COREF RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 413 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 167/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S + V +++ +K+ +E L H+ V G+++ + +Y +L+D Sbjct: 1 MPSAKSTPDTPWPVRDVNNQVKNWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVEQE 59 Query: 64 IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + ++G +V GK + G + + + + P G G LL +E Sbjct: 60 VSVQLTCPTEIIRNRPTPLKDGDRVIVYGKPAFYAGRGSFSLWVTDIRPVGIGQLLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + +++L EGLF K +PF+PK + +IT A RD+L R+P ++ + Sbjct: 120 ELRRQLAAEGLFDPARKKRLPFLPKCVGLITGRGSAAERDVLSVARDRWPEVQFKVINTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG EI A L E P D+II+ARGGGS+EDL F++E + RA+A + Sbjct: 180 VQGASAVPEIIAA------LGELDQDPGVDVIIIARGGGSVEDLLPFSEEALQRAVAAAQ 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP + + L R + + Sbjct: 234 TPVVSAIGHEPDTPILDNVADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L S+ L + + R ++R L ++ ++ + + ++ Sbjct: 294 AREQQALASIRTRPVLADPMTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVS 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPSATLAR 363 Score = 79.4 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 10/161 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E++ I Q+ + + + L +R + Sbjct: 253 ADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADP 312 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 I +++ ++ + ++H +++ + V+ + + TL RGY+ +Q Sbjct: 313 MTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLARGYSVVQVVP 372 Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + +T +++ I DG A +N Sbjct: 373 RDGTPPQVVTTIEQTPPGSQLRIRVADGAITAAAMNTQKSD 413 >gi|294791861|ref|ZP_06757009.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 6_1_27] gi|294457091|gb|EFG25453.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. 6_1_27] Length = 407 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 113/362 (31%), Positives = 170/362 (46%), Gaps = 14/362 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++++L+ +K ++ L +V V G I + HSSGH YFSLKD S ID +W Sbjct: 3 VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61 Query: 72 TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ V + + + +I ++ L + K++L Sbjct: 62 TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMLIGAKSPLQLEFDALKRELTA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F D HK +P++ I ++TS +GAV+ DIL R P ++ +F V VQG Sbjct: 122 LGYFDDSHKVGLPYMASCIGIVTSQSGAVLHDILHVSKQRNPLVQFKLFSVPVQGSTAGP 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I P D+II+ RGGGS+EDLW FND +V AI N+ PIISA+G Sbjct: 182 IIAKGIAT------ADADPDVDVIIVGRGGGSMEDLWCFNDRAVVEAIYNAHTPIISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL DY AD R TP+ A EM V LQ L E L+ I ++ K L Sbjct: 236 HETDYTLCDYVADARGATPSHATEMTVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLT 295 Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L + L L + L + + + + +++S + + Sbjct: 296 LLFNRKLGIPALQFLHKQKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMM 355 Query: 367 QK 368 K Sbjct: 356 IK 357 Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415 H + I Q + + + YI ++K L +L + + Sbjct: 253 TPSHATEMTVLPITILQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRKLGIPALQFLHK 312 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 +H+++L + + + S+++ + L+S + +G+ ++ +N IT Sbjct: 313 QKSHLQELSQTLTNATKERCNAERHSLALLAQQLESLNPLQMMIKGFAKVEH-DNKPITS 371 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 L I + DG A V K Sbjct: 372 VAQLQPNDDIRVTLADGYITATVKEAHKDGRITKK 406 >gi|291166550|gb|EFE28596.1| exodeoxyribonuclease VII, large subunit [Filifactor alocis ATCC 35896] Length = 408 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 106/359 (29%), Positives = 184/359 (51%), Gaps = 13/359 (3%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 ++V EL+ ++ + + + ++ + GEIS + IH +G+ YF++KD+ +++AI+++ Sbjct: 6 WTVGELNRYINQLFKTDPLVQNLYLEGEISSVK-IHGTGNIYFTIKDDIGKVNAIMFRSN 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + IE +EG + + + + Y +I++++ G G L + K+ L EGL Sbjct: 65 VTDIEL-FQEGNQIVCQASVNLYEKEGNYNLIVKNISLKGKGILYLKFLELKETLKSEGL 123 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F ++K +P P+ + VITS TGAVI DI+ RF +I+FP KVQGD +E+ Sbjct: 124 FDSKYKKELPLFPRRVGVITSETGAVIHDIINVSRNRFGKAEIILFPAKVQGDLAVQELM 183 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 + I N D IIL RGGG+ E+L FNDE + R I +S IPIISA+GHET Sbjct: 184 DGIDYFNQ------KNDVDAIILGRGGGAYEELAPFNDEKLARKIFDSQIPIISAVGHET 237 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D T++D+ AD RA TP+ AAE+ P + + +L L + L Sbjct: 238 DVTISDFVADKRASTPSMAAEILFPNIDTIYENLEQKCFELQHQYRTQFHGLDVLLRDYK 297 Query: 312 KALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L L R + ++ +E+ + + + Y ++ + ++ +++ Sbjct: 298 EQLTRYTPGWKLQKERAKNNQYLQEMNYIFSEKMIKMYADLEKNKQQLLALNPLNVLER 356 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 1/126 (0%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 Q+ E + ++ L+ + + R ++ + + + +I S K+ Sbjct: 273 QKCFELQHQYRTQFHGLDVLLRDYKEQLTRYTPGWKLQKERAKNNQYLQEMNYIFSEKMI 332 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 + + + L + N L+RGY ++ N I+ + + ++ I I DG A Sbjct: 333 KMYADLEKNKQQLLALNPLNVLERGYGLVKSKN-RIISSTKEIKSQDMIEIQLKDGMIVA 391 Query: 497 IVINKA 502 V Sbjct: 392 EVSEVH 397 >gi|291302985|ref|YP_003514263.1| exodeoxyribonuclease VII large subunit [Stackebrandtia nassauensis DSM 44728] gi|290572205|gb|ADD45170.1| exodeoxyribonuclease VII, large subunit [Stackebrandtia nassauensis DSM 44728] Length = 414 Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 160/366 (43%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID-- 65 S + V +S+ + + S L V G+I+ +G + +L+D + + Sbjct: 16 PSTPESPWPVRVVSHKIGEWI-SRLGAVWAEGQITQISRRPGAGFVFLTLRDPAAEVSLT 74 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + + ++ + +G +V GK +PG + + G G LL LEK KK Sbjct: 75 VVTTRNVVDACDPPLRDGARVIVHGKPDWYPGRGTLSLRATEIRQVGLGELLARLEKLKK 134 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P+ I +IT A RD+L+ R P + V VQG Sbjct: 135 LLAAEGLFAPERKRPLPFLPRRIGLITGRASAAERDVLENAKTRLPSADFEVREVPVQGP 194 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + ++ A L E P ++IILARGGGS+EDL F+DE + RA+ + PI+ Sbjct: 195 QAVPKVLEA------LAELDADPAVEVIILARGGGSVEDLLPFSDETLCRAVFAAKTPIV 248 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ AD+R TPT A + VP + + RL + I + Sbjct: 249 SAIGHEPDNPLVDFVADVRCSTPTDAGKRVVPDFAEERRGIDQARHRLRQALGGKIDRES 308 Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L ++ L + + + + + + + + +++ Sbjct: 309 QALAAMRSRPCLAQPSRIIDDRQDEITHARDRIRRAFTARLDKAAHDVTSLRGHLRALSP 368 Query: 363 IHNIQK 368 + + Sbjct: 369 QGTLDR 374 Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 2/135 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + R+ I + + + Q + + + Q I I Sbjct: 282 FAEERRGIDQARHRLRQALGGKIDRESQALAAMRSR--PCLAQPSRIIDDRQDEITHARD 339 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 RI + ++ V+ L++ + + TL RGY ++ + + + + Sbjct: 340 RIRRAFTARLDKAAHDVTSLRGHLRALSPQGTLDRGYAIVRRADGAVVRADTEVTASEDL 399 Query: 486 LINFFDGQANAIVIN 500 + G+ IV Sbjct: 400 RVRLARGELTVIVKE 414 >gi|17229266|ref|NP_485814.1| exodeoxyribonuclease VII large subunit [Nostoc sp. PCC 7120] gi|22095667|sp|Q8YW42|EX7L_ANASP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|17130864|dbj|BAB73473.1| exodeoxyribonuclease VII large subunit [Nostoc sp. PCC 7120] Length = 412 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 116/361 (32%), Positives = 187/361 (51%), Gaps = 15/361 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70 SVS L+ +L+ ++E + L V V GE+S H SG +F+L+D + I ++W Sbjct: 15 LSVSGLTDYLRLLLEHDEQLRQVWVVGEVSS-TNHHRSG-LFFTLQDPDGSAAIKCVVWS 72 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + K+ LP G + +V+G I +P +YQ+ + +P+G G ++ K +LL E Sbjct: 73 SQVPKLAQLPVAGEQLIVLGSIRLYPQRGEYQLSVWQAVPAGVGLQALRYQQLKNRLLAE 132 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF Q K +P P+ IAV+TSPT A DI + + R+P L V+ P VQG++ P+ Sbjct: 133 GLFDPQRKRSLPIHPQTIAVVTSPTAAAWGDIQKTLKHRYPGLHVLFSPATVQGEQAPES 192 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++ R +++IL+RGGG++E+L FNDE +VRA+A SIP+++ IGH Sbjct: 193 IVKAIARV------EKDGRAEVLILSRGGGAVEELACFNDERVVRAVAECSIPVVTGIGH 246 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D +L D AD+ TPT AAE VP L + L+ +++ N L + Sbjct: 247 QRDESLVDLVADVCVHTPTAAAEKVVPSLAELSNQHRQRIIALHQVLLHTQTSAENQLQT 306 Query: 310 LLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L N D+ L +L+ + L + +H + ++ S +Q Sbjct: 307 LRNRLQNLRLDRHLQQEAQKLNWQRQRLLQLTMGRSQQAKQHLELLRQKLISLDPKSVLQ 366 Query: 368 K 368 + Sbjct: 367 R 367 Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 5/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ ++ + +K + E Q + + + + L Sbjct: 246 HQRDESLVDLVADVCVHTPTAAAEKVVPSLAELSNQHRQRIIALHQVLLHTQTSAENQLQ 305 Query: 404 MLREQTKN-----RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 LR + +N + + R+ + + + + + + L S K+ L Sbjct: 306 TLRNRLQNLRLDRHLQQEAQKLNWQRQRLLQLTMGRSQQAKQHLELLRQKLISLDPKSVL 365 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 +RGY ++ N LA + I G+ A VI Sbjct: 366 QRGYAVVRQENGAIARSADELAVGNELFIQLAQGEVKAKVIEVE 409 >gi|291437496|ref|ZP_06576886.1| exodeoxyribonuclease VII large subunit [Streptomyces ghanaensis ATCC 14672] gi|291340391|gb|EFE67347.1| exodeoxyribonuclease VII large subunit [Streptomyces ghanaensis ATCC 14672] Length = 402 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 103/381 (27%), Positives = 171/381 (44%), Gaps = 12/381 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 NTSAEAPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V K + + + + P G G LL LE+ KK Sbjct: 63 VTCYRQVFDAVADVVSEGARVVVHCKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLAREGLFAPERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L D+II+ARGGGS+EDL F+DE +VRA+A P++ Sbjct: 183 HAVPQVVQAVKELDAL------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ ADLRA TPT AA+ VP + L R + L+ + Sbjct: 237 SAIGHEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEHERVRMLRDRARRCVRALVDREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L L + + + + L +L + R +H R+ + Sbjct: 297 RGLAQALARPSLQDPHRMVDARAEEVTALLERGRRSLRHQLDRADSELSHTHARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQI 383 +++ + + Sbjct: 357 AATLKRGYAVLQRADGQAVRA 377 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 2/132 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + V+ + + +A + + + L+ R Sbjct: 272 EEHERVRMLRDRARRCVRALVDREERGLAQALAR--PSLQDPHRMVDARAEEVTALLERG 329 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L H++ + +S T + + + TLKRGY +Q + + + + Sbjct: 330 RRSLRHQLDRADSELSHTHARVVALSPAATLKRGYAVLQRADGQAVRAPGEVEAGEALRA 389 Query: 488 NFFDGQANAIVI 499 +G+ V Sbjct: 390 RVSEGEFTVRVD 401 >gi|326381853|ref|ZP_08203546.1| exodeoxyribonuclease VII large subunit [Gordonia neofelifaecis NRRL B-59395] gi|326199279|gb|EGD56460.1| exodeoxyribonuclease VII large subunit [Gordonia neofelifaecis NRRL B-59395] Length = 415 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 96/370 (25%), Positives = 167/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62 + + + V LS+ + + L V V G+++ + A+ +L+D + Sbjct: 3 APDQANSAESPWPVRTLSFKIADWIHR-LGQVWVEGQLTQINARRGTRTAFLTLRDPAAD 61 Query: 63 -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + G L + EG +V G+ + + G + I + P G G LL +E Sbjct: 62 ISMSVTCDPGLLQRSPVPLTEGTRVVVYGRPSFYAGRGTLSLRITDIRPVGIGELLARIE 121 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVK 180 + K L EGLF + K P+PF+P I +I+ A RD+L + R+ ++ + Sbjct: 122 RVKGLLAAEGLFDARRKRPLPFLPHTIGLISGRASAAQRDVLAVAAARWDAVKFDVRDSP 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG I + L+ P +II+ARGGGS+EDL F+DE ++RA+A Sbjct: 182 VQGPTAVPSIIEQLAALDA------DPHVQVIIIARGGGSVEDLLPFSDETLLRAVAACR 235 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D ADLRA TPT AA+ VP + L R + + + Sbjct: 236 TPVVSAIGHEPDSPLLDLVADLRAATPTDAAKQVVPDVAAELDGIAELRRRSAHALRNWV 295 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L+ L L N + + R+D R++ ++ ++ + + +++ Sbjct: 296 HREQHVLDGLRARPVLANPLRMVDDRLDRVDGAVRDIRRSVRHLVTVEEHRTQRLASQLS 355 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 356 TLGPAQTLAR 365 Score = 91.0 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 39/131 (29%), Gaps = 8/131 (6%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + H + +++ + + + + + + I + Sbjct: 282 ELRRRSAHALRNWVHREQHVLDGLRAR-----PVLANPLRMVDDRLDRVDGAVRDIRRSV 336 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN---NFITQKRNLATKTRILIN 488 H + L + TL RGY +Q T+ + + +L + I Sbjct: 337 RHLVTVEEHRTQRLASQLSTLGPAQTLARGYAVVQRTDGDDRHAVRSVDDLPVGAAVRIR 396 Query: 489 FFDGQANAIVI 499 DG A A + Sbjct: 397 VADGSATAAIT 407 >gi|227501577|ref|ZP_03931626.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens ATCC 49725] gi|227077602|gb|EEI15565.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens ATCC 49725] Length = 413 Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 178/370 (48%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +Q + + V +++ +K +E L ++ V G+++ + +Y +L+D Sbjct: 1 MNQPANTPETPWPVGQVNDQVKGWIER-LGYLWVEGQLTQINYKPTWKLSYLTLRDVQQE 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + L+ + ++G +V GK + G + + + G G LL +E Sbjct: 60 KSVQLTCSSSMLHNLPTPLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K + +L EGLF K P+P++P+ I +IT A RD++ R+P ++ + Sbjct: 120 KLRAQLAAEGLFDPARKRPLPYLPQKIGLITGRGSAAERDVMAVARDRWPAVQFRVINTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E+ +A L+E + D+II+ARGGGS+EDL F++E + RA+ +S Sbjct: 180 VQGANTVPEVISA------LQELDADAQIDVIIIARGGGSVEDLLPFSEEALQRAVVAAS 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP ++ + +R+ + + Sbjct: 234 TPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAVIAEARSRMAAALRGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L+++ L + + R ++R+ + L +++ R+ RH + R+ Sbjct: 294 ERERRGLDNIRSRPVLADPMTPIRAHREEVERMRTSMRRELRVLLDRETRHVESLRARVS 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPSATLAR 363 Score = 77.1 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 43/137 (31%), Gaps = 7/137 (5%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + R I E + + ++ + + + I ++++ T Sbjct: 271 VAEERAVIAEARSRMAAALRGWVERERRGLDNIRSR--PVLADPMTPIRAHREEVERMRT 328 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-----DTNNNFITQKRNLA 480 + L + V + + TL RGY+ +Q ++ ++ Sbjct: 329 SMRRELRVLLDRETRHVESLRARVSALGPSATLARGYSIVQVLPKNGSDPEVVSSYEQSP 388 Query: 481 TKTRILINFFDGQANAI 497 ++ I DG A+ Sbjct: 389 PGAQLRIRVGDGSITAV 405 >gi|145295166|ref|YP_001137987.1| exodeoxyribonuclease VII large subunit [Corynebacterium glutamicum R] gi|158513589|sp|A4QCY8|EX7L_CORGB RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|140845086|dbj|BAF54085.1| hypothetical protein [Corynebacterium glutamicum R] Length = 417 Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 171/372 (45%), Gaps = 12/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + + S + V E++ +K +E L H+ V G+++ + +Y +L+D Sbjct: 3 SEKASSKSTPEAPWPVREVNTQVKQWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVE 61 Query: 62 SRIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + ++G +V GK + G + + + + P G G LL Sbjct: 62 QEVSVQLTCPTDIIRNRPTPLKDGDRVIVYGKPAFYAGRGTFSLWVTDIRPVGIGELLAR 121 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ +K+L EGLF K +PF+P + +IT A RD+L R+P ++ + Sbjct: 122 IEELRKRLAAEGLFDPARKKRLPFLPNRVGLITGRGSAAERDVLSVAKDRWPEVQFEVIN 181 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG EI A+ L+ PR D+II+ARGGGS+EDL F++E + RA+A Sbjct: 182 TAVQGASAVPEIIEALRALDQ------DPRVDVIIIARGGGSVEDLLPFSEEALQRAVAA 235 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SAIGHE D + D ADLRA TPT AA+ VP + + L +R + Sbjct: 236 AQTPVVSAIGHEPDTPVLDNVADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRG 295 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + L ++ L + ++ R + + + ++ ++ + + + Sbjct: 296 WVQREQQALAAIRTRPVLADPMTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQ 355 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 356 VSALGPSATLAR 367 Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 53/152 (34%), Gaps = 10/152 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E++ I Q+ + + + + L +R + Sbjct: 257 ADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRGWVQREQQALAAIRTRPVLADP 316 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 I I + + I ++H +++ V+ + + TL RGY+ +Q Sbjct: 317 MTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQVSALGPSATLARGYSVVQVIP 376 Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANA 496 + +T +++ I DG A Sbjct: 377 RDGSAPEVVTTIEQSPPGSQLRIRVADGSITA 408 >gi|332300437|ref|YP_004442358.1| exodeoxyribonuclease VII, large subunit [Porphyromonas asaccharolytica DSM 20707] gi|332177500|gb|AEE13190.1| exodeoxyribonuclease VII, large subunit [Porphyromonas asaccharolytica DSM 20707] Length = 499 Score = 231 bits (588), Expect = 3e-58, Method: Composition-based stats. Identities = 101/526 (19%), Positives = 192/526 (36%), Gaps = 63/526 (11%) Query: 1 MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLK 58 M+ + S L Y+++EL L+ ++ + + V GE+SGYRG GH YF+L Sbjct: 1 MSSLEMQASDLVAKRYTLTELLGSLQRCIDHYYNRLYYVTGEVSGYRGRSQRGHCYFNLI 60 Query: 59 DN--------------HSRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFP 96 D ++I A+IW N+I +GI+ L + ++ + Sbjct: 61 DKASDPLHPELGGGELSAQISAVIWASRYNQIAQHFQQVTGQPLTDGIKILALVELK-YD 119 Query: 97 GSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155 Q+ I+ + PS G + + + L GL + P+P + IA+I+SPT Sbjct: 120 PRYGLQLDIQDIDPSYTLGEVARQRRETLQLLERMGLMERNKQYPMPRPLRRIAIISSPT 179 Query: 156 GAVIRDILQRISCRFPLRVI---IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDII 212 A +D + + I +F +QG P+ I A+ ++ + D++ Sbjct: 180 AAGYQDFTRHLEESAVAPFIEKALFRATMQGKSAPQSIVAALERVRQHET-----LFDLV 234 Query: 213 ILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272 ++ RGGG+ DL F+D + RA+A S+P+ S IGH+ D ++ D + TPT A Sbjct: 235 VIIRGGGATADLGTFDDFAVARAVAEFSLPVWSGIGHDRDESVVDLVSHRAFKTPTAVAT 294 Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 + + L RL + + L Q L + Sbjct: 295 AVIDAWCAEYTLLEEAHQ-------RLERAWQEARQTAQTGLERLAQLLRQTTLEQLHRE 347 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 L + + + ++ R+ + +++ + + Sbjct: 348 ERQMLLLREQLSVSPHTLLRDQHAL--------LESQRERLAGAARYLPMRYQLQWDTLL 399 Query: 393 LEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + + L Q + R L + T + +I+++ Sbjct: 400 TQFRHRYASYLTAQLNQWQARQQSLQEQ------------RKITTTQRTQIEHLAQIIRA 447 Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 + L+RGY + + L I + G +A Sbjct: 448 MDPQTILQRGYAIVHHK-GELVKSPSQLREGDDIELRLAKGTLSAT 492 >gi|302553895|ref|ZP_07306237.1| exodeoxyribonuclease VII, large subunit [Streptomyces viridochromogenes DSM 40736] gi|302471513|gb|EFL34606.1| exodeoxyribonuclease VII, large subunit [Streptomyces viridochromogenes DSM 40736] Length = 402 Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats. Identities = 98/380 (25%), Positives = 169/380 (44%), Gaps = 12/380 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 N+ V E+S + ++ L V V G+I+ +G + +L+D + Sbjct: 4 NTSAESPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V+ K + + + + P G G LL LE+ KK Sbjct: 63 VTCYRQVFDAVADVVSEGARVVVLAKPEWYAPRGQLSLRATEIRPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P+++ ++ A RD+L+ R+P +R + V VQG Sbjct: 123 ALAREGLFAPERKKPLPFLPQLVGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ E D+II+ARGGGS+EDL F+DE ++R +A P++ Sbjct: 183 HAVPQVVQAVK------ELDAIEDVDVIIVARGGGSVEDLLPFSDEQLIRTVAQCRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ ADLRA TPT AA+ VP + L R + L++ + Sbjct: 237 SAIGHEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAALVEREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + + L L + R H R+ + Sbjct: 297 RGLAHALARPSIEDPHRMIDERADHVADLLDRGRRCLRHQLDRADSELTHTHARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQ 382 +++ + + H + Sbjct: 357 AATLKRGYAVLQKADGHAVR 376 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 47/124 (37%), Gaps = 3/124 (2%) Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + + + +E++E+ A+ E I H+ L+ R L H++ Sbjct: 278 RLLRDRARRCVAALVEREERGLAHALARPSIEDPHRMIDERADHVADLLDRGRRCLRHQL 337 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + ++ T + + + TLKRGY +Q + + + + + +G+ + Sbjct: 338 DRADSELTHTHARVVALSPAATLKRGYAVLQKADGHAVRDPGEVEAGEALRARVSEGEFS 397 Query: 496 AIVI 499 V Sbjct: 398 VRVD 401 >gi|29829753|ref|NP_824387.1| exodeoxyribonuclease VII large subunit [Streptomyces avermitilis MA-4680] gi|81838375|sp|Q82IE7|EX7L_STRAW RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|29606862|dbj|BAC70922.1| putative exoribonuclease large subunit [Streptomyces avermitilis MA-4680] Length = 402 Score = 230 bits (587), Expect = 4e-58, Method: Composition-based stats. Identities = 103/396 (26%), Positives = 174/396 (43%), Gaps = 12/396 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 2 AANTSAETPLPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFMTLRDPSYDIS 60 Query: 66 A--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ++ + + + EG +V K + + + + P G G LL LE+ Sbjct: 61 VGVTCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAEIRPIGVGELLARLEQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 KK L EGLF + K +PF+P++I ++ A RD+L+ R+P +R + V VQ Sbjct: 121 KKSLAGEGLFVTERKKALPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G ++ A+ +L+ D+II+ARGGGS+EDL F+DE +VRA+A P Sbjct: 181 GVHAVPQVVQAVKELDAR------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D L DY ADLRA TPT AA+ VP + L R + +I+ Sbjct: 235 VVSAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEEVERVRALRDRARRCVRSVIER 294 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L L + + + + ++ L L ++ R +H R+ + Sbjct: 295 EERGLAHTLARPSIEDPHRMVDERADQVASLLDRGRRTLGHLLDRADSELSHTHARVVAL 354 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 +++ + H + + L + Sbjct: 355 SPAATLKRGYAVLQRADGHAVRAPDEVTADEVLRAR 390 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 2/129 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + V+ + +A + E + + L+ R Sbjct: 275 ERVRALRDRARRCVRSVIEREERGLAHTLARPSI--EDPHRMVDERADQVASLLDRGRRT 332 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L H + + +S T + + + TLKRGY +Q + + + + + Sbjct: 333 LGHLLDRADSELSHTHARVVALSPAATLKRGYAVLQRADGHAVRAPDEVTADEVLRARVA 392 Query: 491 DGQANAIVI 499 +G+ V Sbjct: 393 EGEFTVRVD 401 >gi|313887193|ref|ZP_07820889.1| exodeoxyribonuclease VII, large subunit [Porphyromonas asaccharolytica PR426713P-I] gi|312923422|gb|EFR34235.1| exodeoxyribonuclease VII, large subunit [Porphyromonas asaccharolytica PR426713P-I] Length = 499 Score = 230 bits (587), Expect = 4e-58, Method: Composition-based stats. Identities = 101/526 (19%), Positives = 192/526 (36%), Gaps = 63/526 (11%) Query: 1 MNPFSQKNS-LDHPEYSVSELSYHLKHIVESNLSHVC-VRGEISGYRGIHSSGHAYFSLK 58 M+ + S L Y+++EL L+ ++ + + V GE+SGYRG GH YF+L Sbjct: 1 MSSLEMQASDLVAKRYTLTELLGSLQRCIDHYYNRLYYVTGEVSGYRGRSQRGHCYFNLI 60 Query: 59 DN--------------HSRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFP 96 D ++I A+IW N+I +GI+ L + ++ + Sbjct: 61 DKASDPLHPELGGGELSAQISAVIWASRYNQIAQHFQQVTGQPLTDGIKILALVELK-YD 119 Query: 97 GSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155 Q+ I+ + PS G + + + L GL + P+P + IA+I+SPT Sbjct: 120 PRYGLQLDIQDIDPSYTLGEVARQRRETLQLLERMGLMERNKQYPMPRPLRRIAIISSPT 179 Query: 156 GAVIRDILQRISCRFPLRVI---IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDII 212 A +D + + I +F +QG P+ I A+ ++ + D++ Sbjct: 180 AAGYQDFTRHLEESAVAPFIEKALFRATMQGKSAPQSIVAALERVRQHET-----LFDLV 234 Query: 213 ILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272 ++ RGGG+ DL F+D + RA+A S+P+ S IGH+ D ++ D + TPT A Sbjct: 235 VIIRGGGATADLGTFDDFAVARAVAEFSLPVWSGIGHDRDESVVDLVSHRAFKTPTAVAT 294 Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 + + L RL + + L Q L + Sbjct: 295 AVIDAWCAEYTLLEEAHQRLERAWLEARQTAQ-------TGLERLAQLLRQTTLEQLHRE 347 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 L + + + ++ R+ + +++ + + Sbjct: 348 ERQMLLLREQLSVSPHTLLRDQHAL--------LESQRERLAGAARYLPMRYQLQWDTLL 399 Query: 393 LEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + + L Q + R L + T + +I+++ Sbjct: 400 TQFRHRYASYLTAQLNQWQARQQSLQEQ------------RKITTTQRTQIEHLAQIIRA 447 Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 + L+RGY + + L I + G +A Sbjct: 448 MDPQTILQRGYAIVHHK-GELVKSPSQLREGDDIELRLAKGTLSAT 492 >gi|306835737|ref|ZP_07468741.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens ATCC 49726] gi|304568368|gb|EFM43929.1| exodeoxyribonuclease VII large subunit [Corynebacterium accolens ATCC 49726] Length = 413 Score = 230 bits (586), Expect = 5e-58, Method: Composition-based stats. Identities = 94/372 (25%), Positives = 178/372 (47%), Gaps = 16/372 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD---- 59 +Q + + V +++ +K +E L ++ V G+++ + +Y +L+D Sbjct: 1 MNQPANTPETPWPVGQVNDQVKGWIER-LGYLWVEGQLTQINYKPTWKLSYLTLRDVQQE 59 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 ++ L+ + ++G +V GK + G + + + G G LL Sbjct: 60 KSVQLTCA--SSMLHNLPTQLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLAR 117 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +EK + +L EGLF K P+P++P+ I +IT A RD++ R+P ++ + Sbjct: 118 IEKLRAQLAAEGLFDPARKRPLPYLPQKIGLITGRGSAAERDVMAVARDRWPAVQFRVIN 177 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG E+ +A L+E D+II+ARGGGS+EDL F++E + RA+ Sbjct: 178 TAVQGANTVPEVISA------LQELDADAEIDVIIIARGGGSVEDLLPFSEEALQRAVVA 231 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 +S P++SAIGHE D + D ADLRA TPT AA+ VP ++ + +R+ + Sbjct: 232 ASTPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAVIAEARSRMAAALRG 291 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + L+++ L + + R ++R+ + L +++ R+ RH + R Sbjct: 292 WVERERRGLDNIRSRPVLADPMTPIRARREEVERMRTSMRRELRVLLDRETRHVESLRAR 351 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 352 VSALGPSATLAR 363 Score = 77.5 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 42/137 (30%), Gaps = 7/137 (5%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + R I E + + ++ + + + I ++++ T Sbjct: 271 VAEERAVIAEARSRMAAALRGWVERERRGLDNIRSR--PVLADPMTPIRARREEVERMRT 328 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLA 480 + L + V + + TL RGY+ +Q + ++ Sbjct: 329 SMRRELRVLLDRETRHVESLRARVSALGPSATLARGYSIVQVLPKDGSDPEVVSSYEQSP 388 Query: 481 TKTRILINFFDGQANAI 497 ++ I DG A+ Sbjct: 389 PGAQLRIRVGDGSITAV 405 >gi|19552246|ref|NP_600248.1| exodeoxyribonuclease VII large subunit [Corynebacterium glutamicum ATCC 13032] gi|62389911|ref|YP_225313.1| exodeoxyribonuclease VII large subunit [Corynebacterium glutamicum ATCC 13032] gi|23814087|sp|Q8NRM3|EX7L_CORGL RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|21323792|dbj|BAB98418.1| Exonuclease VII, large subunit [Corynebacterium glutamicum ATCC 13032] gi|41325247|emb|CAF19727.1| EXODEOXYRIBONUCLEASE VII LARGE SUBUNIT [Corynebacterium glutamicum ATCC 13032] Length = 417 Score = 230 bits (586), Expect = 5e-58, Method: Composition-based stats. Identities = 93/372 (25%), Positives = 171/372 (45%), Gaps = 12/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + + S + V E++ +K +E L H+ V G+++ + +Y +L+D Sbjct: 3 SEKASSKSTPEAPWPVREVNTQVKQWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVE 61 Query: 62 SRIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + ++G +V GK + G + + + + P G G LL Sbjct: 62 QEMSVQLTCPTDIIRNRPTPLKDGDRVIVYGKPAFYAGRGTFSLWVTDIRPVGIGELLAR 121 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ +K+L EGLF K +PF+P + +IT A RD+L R+P ++ + Sbjct: 122 IEELRKRLAAEGLFDPARKKRLPFLPNRVGLITGRGSAAERDVLSVAKDRWPEVQFEVIN 181 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG EI A+ L+ PR D+II+ARGGGS+EDL F++E + RA+A Sbjct: 182 TAVQGASAVPEIIEALRVLDQ------DPRVDVIIIARGGGSVEDLLPFSEEALQRAVAA 235 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SAIGHE D + D ADLRA TPT AA+ VP + + L +R + Sbjct: 236 AQTPVVSAIGHEPDTPVLDNVADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRG 295 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + L ++ L + ++ R + + + ++ ++ + + + Sbjct: 296 WVQREQQALAAIRTRPVLADPMTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQ 355 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 356 VSALGPSATLAR 367 Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 53/152 (34%), Gaps = 10/152 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E++ I Q+ + + + + L +R + Sbjct: 257 ADLRAATPTDAAKRVVPDVAEERMLINQLRSRSAAALRGWVQREQQALAAIRTRPVLADP 316 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 I I + + I ++H +++ V+ + + TL RGY+ +Q Sbjct: 317 MTPINRRRDEIAQAVGLIRRDVTHLVRTEQALVASLRAQVSALGPSATLARGYSVVQVIP 376 Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANA 496 + +T +++ I DG A Sbjct: 377 RDGSAPEVVTTIEQSPPGSQLRIRVADGSITA 408 >gi|189423308|ref|YP_001950485.1| exodeoxyribonuclease VII [Geobacter lovleyi SZ] gi|189419567|gb|ACD93965.1| Exodeoxyribonuclease VII [Geobacter lovleyi SZ] Length = 526 Score = 230 bits (586), Expect = 5e-58, Method: Composition-based stats. Identities = 102/527 (19%), Positives = 203/527 (38%), Gaps = 49/527 (9%) Query: 15 YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH------SRIDAI 67 + +S ++ + ++E +S V+ EIS G G Y L + ++I Sbjct: 6 FPLSAITKRINELLEPAISKQFWVKAEIS--TGRERGGAFYCDLVETDDGGKIVAKIACT 63 Query: 68 IWKGTLNKIE--FLPEEGIEFLVIGKI-----TT-FPGSSKYQIIIESLIPS-GSGTLLT 118 IW+ L+ I+ F L G + + F + + PS G + Sbjct: 64 IWQRELSTIKELFKARNMDLVLTNGTVVGFLCSLQFSPQYGLSLRVIDADPSIALGEMEL 123 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS-CRFPLRVIIF 177 + ++L +EGLF + +P +P + +ITS A D +Q ++ + ++ + Sbjct: 124 KKREIIERLQKEGLFETNKERFVPILPIRLGLITSSGSAAYNDFIQTLTASGYGFKIYLA 183 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQGD+ K + A+ L L D++++ RGGGS DL+ ++E I R IA Sbjct: 184 DAMVQGDQTEKSVLRALDALTGL-------DVDLVLILRGGGSKTDLYFLDNEAISRKIA 236 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P+ + IGHE D ++ DY A+ TPT AAE V ++ L L + Sbjct: 237 GYPKPVWTGIGHEIDTSILDYIANRSFKTPTAAAEELVARFVQMRRQLDEATNTLKTVWA 296 Query: 298 RLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 +K + L + + + L + L +EL ++ + + + Sbjct: 297 YRLKIDQDYLARAVTGIQQGPRKLLDVTASCLREQAQELRARVQRRLSTEQIGIGRRREK 356 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQH------------LRYIFLEKKEKIAILHM 404 ++S + + + + + K+Q + V R+ ++A+ Sbjct: 357 LRS-LPLTLTKNHMERLAAKRQELSSGVTHCLTRTGETLSGLKQRFEKERFLRRLAVERE 415 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH--TSVSIT-------TRILQSFAYK 455 E+ + ++ + K+ + + ++K +++ L++ + Sbjct: 416 RNEKNRQQLKARFFSVFKMKYMLLTNIKGRLKQERVLQRIALARTSLNDKMATLKAIDPQ 475 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 LKRG+ + + ++A K I DG + V K Sbjct: 476 TVLKRGFALVYSQQGTLVRSIADVAEKQLIQTRLADGSLISEVTAKE 522 >gi|329935245|ref|ZP_08285211.1| exonuclease VII large subunit XseA [Streptomyces griseoaurantiacus M045] gi|329305068|gb|EGG48927.1| exonuclease VII large subunit XseA [Streptomyces griseoaurantiacus M045] Length = 448 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 99/381 (25%), Positives = 169/381 (44%), Gaps = 12/381 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 N+ V ++S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 NTSADTPLPVGQVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V K + + + + P G G LL LE+ KK Sbjct: 63 VTCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLAAEGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ E D+I++ARGGGS+EDL F+DE +VR +A P++ Sbjct: 183 HAVPQVVQAVK------ELDAHEEVDVIVVARGGGSVEDLLPFSDEQLVRTVAECRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L DY ADLRA TPT AA+ VP + L R ++ + Sbjct: 237 SAIGHEPDTPLLDYVADLRASTPTDAAKKVVPDVGEELEKVRGLRDRARRCAHAFVEREE 296 Query: 305 NTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + + L L ++ R +H R+ + Sbjct: 297 RGLAHALARPCMEDPHRMVDERADHVASLTDRSRRTLGHLLDRADSELSHTHARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQI 383 +++ + + H+ + Sbjct: 357 AATLRRGYAVLQKDDGHVVRA 377 Score = 87.9 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 47/171 (27%), Gaps = 16/171 (9%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + +A E + H+ L R Sbjct: 275 EKVRGLRDRARRCAHAFVEREERGLAHALAR--PCMEDPHRMVDERADHVASLTDRSRRT 332 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L H + + +S T + + + TL+RGY +Q + + + +A + Sbjct: 333 LGHLLDRADSELSHTHARVVALSPAATLRRGYAVLQKDDGHVVRAPEEVAEGEPLRARVA 392 Query: 491 DGQANAIVINKAPPKEQPTKK--------------CQLHNNKREKQGTQGE 527 +G+ V + + + G QG Sbjct: 393 EGEFAVRVATAGERAVEQAGQQDRQGQRKRRGRQGTPGTPETQGAPGAQGT 443 >gi|319440950|ref|ZP_07990106.1| exodeoxyribonuclease VII large subunit [Corynebacterium variabile DSM 44702] Length = 440 Score = 230 bits (585), Expect = 6e-58, Method: Composition-based stats. Identities = 101/373 (27%), Positives = 172/373 (46%), Gaps = 13/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59 M+ + D P + V ++ +K +E L H+ V G+I+ S +Y +L+D Sbjct: 1 MSESPGPTTADSP-WHVHTVNEKVKGWIER-LGHLWVEGQITQLNMKPSWKLSYITLRDV 58 Query: 60 -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 I TL + + G +V GK + ++ + + + P G G +L Sbjct: 59 SQEQSIKLTCSTQTLRNLPVPVKNGDRVVVYGKPAFYAVRGEFSLWVSQIRPVGVGEMLA 118 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ K+ L EGLF + K P+PF+P I +IT A D+L R+P +R Sbjct: 119 RIEELKRALAAEGLFDPRLKRPLPFLPNRIGLITGRESAAEHDVLSVSRDRWPVVRFETI 178 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG + I +A+ L PR D+II+ARGGGS+EDL F++E + RA++ Sbjct: 179 NTPVQGSQAVPAILDALRTL------EADPRVDVIIVARGGGSVEDLLPFSEEALARAVS 232 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + + P++SAIGHE D + D ADLRA TPT AA+ VP S + L R + Sbjct: 233 SMTTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVAAELSLIAELRGRAAGALR 292 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L S+ L + ++ +R ++ + L +++ + Sbjct: 293 SWVANEQRGLASVRSRPVLADPMLPITRAREVVEDARSRNDRALGVLVRTARHQVESLRA 352 Query: 356 RIKSDFLIHNIQK 368 R+ + +++ Sbjct: 353 RVNALGPSQTLRR 365 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 5/110 (4%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + I ++ +R + L +++ V + + TL+R Sbjct: 306 RSRPVLADPMLPITRAREVVEDARSRNDRALGVLVRTARHQVESLRARVNALGPSQTLRR 365 Query: 461 GYTSIQ-----DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 GY +Q T IT ++ +++ I DG A + Sbjct: 366 GYAVVQVVPRDHTPPQVITTVDDVEPGSQLRIRVLDGSVTAAAMGVQKSP 415 >gi|172040297|ref|YP_001800011.1| exodeoxyribonuclease VII large subunit [Corynebacterium urealyticum DSM 7109] gi|171851601|emb|CAQ04577.1| exodeoxyribonuclease large subunit [Corynebacterium urealyticum DSM 7109] Length = 449 Score = 230 bits (585), Expect = 7e-58, Method: Composition-based stats. Identities = 98/369 (26%), Positives = 170/369 (46%), Gaps = 14/369 (3%) Query: 7 KNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 + + + P + VS ++ +K +E L + V G+I+ + +Y +L+D Sbjct: 19 RMNANSPEQPWPVSMVNQKIKGWIER-LGFLWVEGQITQVNMKPTWKLSYITLRDVEKDL 77 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 I + TL + +G +V GK + G + + + + G G LL +E+ Sbjct: 78 SIPLTMNTRTLQNLPTPLRDGDRVVVYGKPAFYAGRGSFSLWVTQVRQVGVGELLARIEQ 137 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K+ L EGLF + K+ PF+PK I ++T A RD+L R+P +R + V Sbjct: 138 LKRALSAEGLFDPRLKSAPPFLPKKIGLVTGRGSAAERDVLSVAQQRWPAVRFEVINTAV 197 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG E+ A+ +L D+II+ARGGGS+EDL F++E +VRA+A Sbjct: 198 QGPNTVPEVVAALQRL------EADEDVDVIIVARGGGSVEDLLPFSEEALVRAVARMRT 251 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHE D + D AD+RA TPT AA+ VP Q ++ L R + ++ Sbjct: 252 PVVSAIGHEPDNPVLDLVADVRAATPTDAAKKVVPDVLGEQQAIAELRQRAVGALRSWVR 311 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + +D L R R ++ + L +++ + + ++ + Sbjct: 312 SERRQLEGVRSRPVLADPLLPLRRQREVIEEAVGRKDRALGLLVRDMRSRISSLRAQVNA 371 Query: 360 DFLIHNIQK 368 + + Sbjct: 372 LGPSQTLAR 380 Score = 85.2 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 21/161 (13%), Positives = 54/161 (33%), Gaps = 7/161 (4%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 +Q I E +Q ++ +R ++ + + + I++ + R + Sbjct: 291 EQQAIAELRQRAVGALRSWVRSER--RQLEGVRSRPVLADPLLPLRRQREVIEEAVGRKD 348 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKT 483 L ++ + +S + + TL RGY+ + +D + +T +++ + Sbjct: 349 RALGLLVRDMRSRISSLRAQVNALGPSQTLARGYSIMQVIPRDGSGPAVVTTVADVSPGS 408 Query: 484 RILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524 ++ I DG A + N + Sbjct: 409 QLRIRVADGSVTAAAMAVERAPGAEASDTARDNAATKTDEE 449 >gi|169628348|ref|YP_001701997.1| exodeoxyribonuclease VII large subunit XseA [Mycobacterium abscessus ATCC 19977] gi|169240315|emb|CAM61343.1| Probable exodeoxyribonuclease VII large subunit XseA [Mycobacterium abscessus] Length = 410 Score = 229 bits (584), Expect = 8e-58, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 170/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + V ++ + ++ L V V G+++ S + L+D + Sbjct: 1 MADPGTSPENPWPVRAVATRVAKWIDR-LGQVWVEGQLTQIDVRPGSRTVFMVLRDPAAD 59 Query: 64 ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + EG + +V GK T + G + + + + G G LL +E Sbjct: 60 MSLTVTCPPDMVRNAPVKLTEGTQVVVCGKPTFYTGRGSFSLRLSEIRAVGIGELLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF + K P+PF+P I +IT A D+ + R+P ++ I Sbjct: 120 RLRQLLAAEGLFDARLKRPVPFLPARIGLITGRASAAEHDVTSVATTRWPAVQFAIRNTP 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG EI A+ L+ P D+I+LARGGGS+EDL F+DE + RAI+ Sbjct: 180 VQGPHAVAEIVAALQALDA------DPSVDVIVLARGGGSVEDLLPFSDETLCRAISACR 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SA+GHE D L+D ADLRA TPT AA+ VP Q+ +++L R + + Sbjct: 234 TPVVSAVGHEPDNPLSDLVADLRAATPTDAAKKLVPDAAAEQALILDLRRRSAQALRNWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L+ + L + + +S + +D L ++ ++ + + H+ R+ Sbjct: 294 QREQRGLDQVRSRPVLADPLRMVSVRQDEIDGARNALRRDVRRLVDIESQRVEHLTARLT 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 TLGPAATLAR 363 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 49/167 (29%), Gaps = 9/167 (5%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + ++ +++ +K +Q I + ++ + + + + L Sbjct: 242 HEPDNPLSDLVADLRAATPTDAAKKLVPDAAAEQALILDLRRRSAQALRNWVQREQRGLD 301 Query: 404 MLREQT-----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 +R + + I + + + V T L + TL Sbjct: 302 QVRSRPVLADPLRMVSVRQDEIDGARNALRRDVRRLVDIESQRVEHLTARLTTLGPAATL 361 Query: 459 KRGYTSIQ--DTNN--NFITQKRNLATKTRILINFFDGQANAIVINK 501 RGY+ +Q + + + + + DG A V + Sbjct: 362 ARGYSVVQRVRDDGTVEVLRTVADAPVGAPLRVRVSDGAVTATVTGE 408 >gi|254381903|ref|ZP_04997266.1| exodeoxyribonuclease 7 large subunit [Streptomyces sp. Mg1] gi|194340811|gb|EDX21777.1| exodeoxyribonuclease 7 large subunit [Streptomyces sp. Mg1] Length = 406 Score = 229 bits (583), Expect = 9e-58, Method: Composition-based stats. Identities = 101/394 (25%), Positives = 178/394 (45%), Gaps = 12/394 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 N+ V ++S + ++ L V V G+I+ +G + +L+D + Sbjct: 4 NTSADAPLPVGQVSRLIGGWIDK-LGQVWVEGQITQLSRRPGAGVVFLTLRDPSHDISLS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ +++ EG +V+ K + + + + P G G LL LE+ K+ Sbjct: 63 VTCFRQVYDEVADAVTEGARVVVLAKPEWYAPRGQLSLRATEIRPVGIGELLARLERLKR 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLATEGLFALDRKKPLPFLPQLIGLVVGRASAAERDVLENARRRWPAVRFEVRNVAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ L P D+II+ARGGGS+EDL F+DE +VR +A + P++ Sbjct: 183 HAAAQVIRAVQELDAL------PEVDVIIVARGGGSVEDLLPFSDEEVVRTVAAARTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L+ R + L+ + Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVNEELERVRQLQGRGLRAVRGLLDREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + ++ L L ++ R H + R+ + Sbjct: 297 RGLAHALARPVFVHPQRMVETREEEVEALLARSRRTLGHLLDRADSELTHTLARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 +++ + H+ + ++ L + Sbjct: 357 AATLERGYAVLQRADGHVVRSPEEVAEGDELRAR 390 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 57/153 (37%), Gaps = 5/153 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ +K + E+ + + Q+ + LR + + L + Sbjct: 250 LVADLRASTPTDAAKKVVPDVNEELERVRQLQGRGLRAVRGLLDREERGLAHALARPVFV 309 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + ++ L+ R L H + + ++ T + + + TL+RGY +Q Sbjct: 310 HPQRMVETREEEVEALLARSRRTLGHLLDRADSELTHTLARVVALSPAATLERGYAVLQR 369 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 + + + +A + +G+ + V Sbjct: 370 ADGHVVRSPEEVAEGDELRARVAEGEFHVRVDG 402 >gi|288574983|ref|ZP_06393340.1| exodeoxyribonuclease VII, large subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570724|gb|EFC92281.1| exodeoxyribonuclease VII, large subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 408 Score = 229 bits (583), Expect = 1e-57, Method: Composition-based stats. Identities = 110/359 (30%), Positives = 181/359 (50%), Gaps = 11/359 (3%) Query: 10 LDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV +LS+ +K +E + + V GEI + HSSGH YF+L SRI + Sbjct: 6 SNKGILSVDDLSFRIKEAIESYPGMGKIAVHGEIVDLK-RHSSGHCYFTLSGRESRIAGV 64 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + P G E +V G+++++P YQ+ L P G G + A E+ + KL Sbjct: 65 LFRSDAAGVVKWPRPGDEVVVGGRVSSYPQRGIYQLYARRLFPLGKGAISRAKEELRAKL 124 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 +EG+F+ + K PIP P+ + ITS TGA RD+++ + R P + +++ P VQG + Sbjct: 125 SKEGIFAPERKRPIPPYPERVLCITSATGAAFRDVVKVMGTRNPSVELVLIPATVQGVDG 184 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 P EIA A ++ + D ++L RGGGS DL F+DE +VR+I++ +P++ Sbjct: 185 PDEIAEAFAKVPSFLPA------DAVLLVRGGGSRGDLNPFDDETVVRSISSCPVPVVVG 238 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +GH+ D+TL+D AAD+R TP+ AAE VP + +L S L N + RL + R I Sbjct: 239 VGHQVDFTLSDMAADMRCATPSEAAEAVVPDRTYLYSLLSNGKNRLKKAMEREIDRLATR 298 Query: 307 LNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + L + + +D L R E + + + + + Sbjct: 299 VVDRETLLTRLVAGDIDRLKKDVDGLSRRAVSATEKTVVSEIGRLAGLSAALDGASPLR 357 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 51/128 (39%), Gaps = 3/128 (2%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + +++ +++ + + ++ +L L I L + L R Sbjct: 277 LSNGKNRLKKAMEREIDRLATRVVDRETLLTRL---VAGDIDRLKKDVDGLSRRAVSATE 333 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + S ++ + L + L +GY S +D ++ +++A +I ++F DG Sbjct: 334 KTVVSEIGRLAGLSAALDGASPLRILGKGYVSCRDETGTPVSSVKSMAPGKKISLDFLDG 393 Query: 493 QANAIVIN 500 +A V + Sbjct: 394 RAYCRVES 401 >gi|220908495|ref|YP_002483806.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. PCC 7425] gi|254783698|sp|B8HMX6|EX7L_CYAP4 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|219865106|gb|ACL45445.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 7425] Length = 424 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 119/387 (30%), Positives = 195/387 (50%), Gaps = 16/387 (4%) Query: 4 FSQKNSLDHP-EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD- 59 F+Q N L P SV L+ +++ ++E + L V V GE+S H SG +F+L+D Sbjct: 3 FTQPNLLFPPTVLSVGGLTQYIQTLLEQDEELMQVWVTGEVSS-ASQHRSG-LFFTLQDP 60 Query: 60 -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + I+W L K+ LP G + +++G+I +P +YQ+++ +P+G G + Sbjct: 61 DERVALRCIVWASQLEKLSILPVPGEQVILLGRIRVYPQRGEYQLMVWQALPAGEGLMAL 120 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 + + +L EGLF K P+P P+ IAV+TSP A DI + +S R+P LRV++ Sbjct: 121 RYRQLRDRLETEGLFDPARKRPLPPHPQTIAVVTSPQAAAWGDIQRTLSHRYPGLRVLLS 180 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P VQGD+ P I AI ++ R +++IL+RGGG+ ED+ FN E +VRAIA Sbjct: 181 PALVQGDQAPDSIVAAIERV------EKDGRAEVLILSRGGGATEDMACFNHERVVRAIA 234 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 SIP+I+ IGH+ D +LAD AD+ TPT AA++AVP L + L Sbjct: 235 ECSIPVIAGIGHQRDESLADLVADVHVHTPTAAAQLAVPDLAELYTEHCQRLDHLITAGQ 294 Query: 298 RLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + N L + L ++ L + L ++L + + ++ H + Sbjct: 295 TRLALAQNQLQHQNRRLKRLPLERQLVQEGRAIAHLKQQLIQTVSQQLQQRLTHQQLLAQ 354 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQ 382 +++S +Q+ + I + Sbjct: 355 KLQSLDPRAILQRGYAIARRQNGQILR 381 Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 53/167 (31%), Gaps = 5/167 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ----QHIEQIVKQ-HLRYIFLEKKEK 398 ++ ++ + Q + E Q ++ ++ R + + + Sbjct: 246 HQRDESLADLVADVHVHTPTAAAQLAVPDLAELYTEHCQRLDHLITAGQTRLALAQNQLQ 305 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + R + ++ I L ++ +S +++ T + + LQS + L Sbjct: 306 HQNRRLKRLPLERQLVQEGRAIAHLKQQLIQTVSQQLQQRLTHQQLLAQKLQSLDPRAIL 365 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 +RGY + N + L + + DGQ V Sbjct: 366 QRGYAIARRQNGQILRTIAALQEGDDLTLQLSDGQVKVQVRKIMAAG 412 >gi|255324402|ref|ZP_05365519.1| exodeoxyribonuclease VII, large subunit [Corynebacterium tuberculostearicum SK141] gi|255298308|gb|EET77608.1| exodeoxyribonuclease VII, large subunit [Corynebacterium tuberculostearicum SK141] Length = 413 Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 178/370 (48%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +Q + + V +++ +K +E L ++ V G+++ + +Y +L+D Sbjct: 1 MNQPANTPDTPWPVGKVNDQVKGWIER-LGYLWVEGQLTQINFKPTWKLSYLTLRDVQQE 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + L + ++G +V GK + G + + + G G LL +E Sbjct: 60 KSVQLTCPSSMLQSLSAPLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K +++L EGLF K P+P++P I +IT A RD++ R+P ++ + Sbjct: 120 KLRQQLAAEGLFDPARKRPLPYLPHKIGLITGRGSAAERDVMAVAHDRWPAVQFRVLNTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E+ +A+ QL+ P D+II+ARGGGS+EDL F++E + RA+A + Sbjct: 180 VQGANTVPEVIDALQQLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAAAG 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP ++ + +R+ + + Sbjct: 234 TPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAIVAEARSRMAAALRGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L+++ + + + R ++R + +E+++ R+ RH + RI Sbjct: 294 ERERRGLDNIRSRPVMADPMTPIRARREEVERTRATMRREIEVMVERETRHVESLRARIS 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPSATLAR 363 Score = 77.1 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 42/137 (30%), Gaps = 7/137 (5%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + R + E + + ++ + + + I +++ Sbjct: 271 VAEERAIVAEARSRMAAALRGWVERERRGLDNIRSR--PVMADPMTPIRARREEVERTRA 328 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLA 480 + + ++ V + + TL RGY+ +Q + +T + Sbjct: 329 TMRREIEVMVERETRHVESLRARISALGPSATLARGYSIVQVVPKDGSGPEVVTSYKQSP 388 Query: 481 TKTRILINFFDGQANAI 497 ++ I DG A+ Sbjct: 389 PGAQLRIRVGDGSITAV 405 >gi|158336480|ref|YP_001517654.1| exodeoxyribonuclease VII large subunit [Acaryochloris marina MBIC11017] gi|189037857|sp|B0BZ38|EX7L_ACAM1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158306721|gb|ABW28338.1| exodeoxyribonuclease VII, large subunit [Acaryochloris marina MBIC11017] Length = 418 Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats. Identities = 122/422 (28%), Positives = 200/422 (47%), Gaps = 20/422 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK 58 M + + SV L+ +++ ++E + L V V GE+S H SG +F+L+ Sbjct: 1 MTSYQPNLLVPPEVLSVKGLTDYIQTLLEDDSYLVQVWVEGEVSS-AARHRSG-FFFTLQ 58 Query: 59 D--NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 D + I +IW +++ PE G + L +G+I +P +YQ++ L P+G G Sbjct: 59 DQQEAASIHCVIWNSYCDQLVIEPEVGEQILALGRIRVYPQRGQYQLMAWQLFPAGEGLR 118 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 ++ +++L EGLF K +P P+ + V+TS A DI + + + P L+V+ Sbjct: 119 SLRYQQLRERLTREGLFDPLQKQALPTYPQTVGVVTSHQAAAWGDIKRTLKAQHPGLKVL 178 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 P KVQG + P+ I AI ++ R +++I+ARGGG+ EDL FNDE +VRA Sbjct: 179 FSPTKVQGKQAPEAIVLAIERV------IKDGRAEVLIVARGGGATEDLACFNDERVVRA 232 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA IP+IS IGH+ D TLAD AD+ A TPT AAE +P Q+ N ARL I Sbjct: 233 IAECPIPVISGIGHQRDETLADLVADVCAHTPTAAAE-CIPRLTDWQTDYRNCIARLYII 291 Query: 296 IIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + R + L L D+ + RL L H ++ + + +H + Sbjct: 292 LTRQLDVAHEHLLYQKTRLRRLQIDRQFEREQVLRSRLQNHLLHAIKHRLGQAQQHQQLL 351 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK----EKIAILHMLREQT 409 ++ S +++ + Q I + +Q L+ + A + L+ Sbjct: 352 QQQLTSLDPTQVLKRGYALVQTTDQQIVRSTQQLQVDQELKVELAEGHFTARVTALQSSP 411 Query: 410 KN 411 + Sbjct: 412 QE 413 Score = 77.9 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 1/136 (0%) Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE-QTKNRIFYLHTHIKKLITRIEFILS 432 + + I ++ R + + + + LR Q + +L + + Sbjct: 279 TDYRNCIARLYIILTRQLDVAHEHLLYQKTRLRRLQIDRQFEREQVLRSRLQNHLLHAIK 338 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 H++ + + L S LKRGY +Q T+ + + L + + +G Sbjct: 339 HRLGQAQQHQQLLQQQLTSLDPTQVLKRGYALVQTTDQQIVRSTQQLQVDQELKVELAEG 398 Query: 493 QANAIVINKAPPKEQP 508 A V ++ Sbjct: 399 HFTARVTALQSSPQEA 414 >gi|302558649|ref|ZP_07310991.1| exodeoxyribonuclease VII, large subunit [Streptomyces griseoflavus Tu4000] gi|302476267|gb|EFL39360.1| exodeoxyribonuclease VII, large subunit [Streptomyces griseoflavus Tu4000] Length = 402 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 104/394 (26%), Positives = 173/394 (43%), Gaps = 12/394 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 N+ V E+S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 NTSAEAPIPVGEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVG 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V K + + + + P G G LL LE+ KK Sbjct: 63 VTCYRQVFDAVADVVSEGARVVVHCKPEWYAPRGQLSLRATEIKPVGVGELLARLEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 SLAREGLFAAERKKPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ +L+ E D+II+ARGGGS+EDL F+DE +VRA+A P++ Sbjct: 183 HAVPQVVQAMKELDAADE------VDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ ADLRA TPT AA+ VP + L R + L+ + Sbjct: 237 SAIGHEPDNPLLDHVADLRASTPTDAAKKVVPDVGEEAERVRMLRDRARRCVRALLDREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + + L L + R H R+ + Sbjct: 297 RGLAQALARPSIQDPHRMIDARAEEVTALLERARRTLRHQLDRADSELTHTHARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 +++ + H + + L + Sbjct: 357 AATLKRGYAVLQRADGHAVRAPGEVEAGQALRAR 390 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 2/132 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + V+ L + +A + + I + L+ R Sbjct: 272 EEAERVRMLRDRARRCVRALLDREERGLAQALARPSI--QDPHRMIDARAEEVTALLERA 329 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L H++ + ++ T + + + TLKRGY +Q + + + + + Sbjct: 330 RRTLRHQLDRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRAPGEVEAGQALRA 389 Query: 488 NFFDGQANAIVI 499 +G+ N V Sbjct: 390 RVSEGEFNVRVD 401 >gi|183984328|ref|YP_001852619.1| exodeoxyribonuclease VII (large subunit) XseA [Mycobacterium marinum M] gi|183177654|gb|ACC42764.1| exodeoxyribonuclease vii (large subunit) XseA [Mycobacterium marinum M] Length = 415 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 13/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+P + NS ++P + V ++ + ++ L V V G+++ +S + L+D Sbjct: 1 MSPAAASNSAENP-FPVRAVAIRVAGWIDR-LGTVWVEGQLAQITIRPNSKTVFMVLRDP 58 Query: 61 HSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + + + + EG + +V GK + + G + + + + G G LL Sbjct: 59 AADMSLTVTCPRDLVLSAPVKLTEGTQVVVCGKPSFYTGRGTFSLRLNEIRAVGVGELLA 118 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ ++ L EGLF + K PIPF+P + +IT A RD+ + R+P +R + Sbjct: 119 RIERLRRLLDAEGLFDPRLKRPIPFLPNTVGLITGRASAAERDVTTVAATRWPAVRFAVR 178 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG +I A L+E + D+I++ARGGGS+EDL F+DE + RAIA Sbjct: 179 NTAVQGPNAVAQIVEA------LRELDSDLEVDVIVVARGGGSVEDLLPFSDETLCRAIA 232 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P+ISA+GHE D L D ADLRA TPT AA+ AVP Q + +L R + Sbjct: 233 ACRTPVISAVGHEPDNPLCDLVADLRAATPTDAAKKAVPDTAAEQRLVADLRRRSAQALR 292 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L L L + + L + R L ++ +I + + H+ Sbjct: 293 NWVSREQRALTQLRSRPVLADPLKALITRSDEIQRARSALRRDVSRLISTETENIGHLGA 352 Query: 356 RIKSDFLIHNIQK 368 R+ + + + Sbjct: 353 RLATLGPAATLAR 365 Score = 77.9 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 52/155 (33%), Gaps = 10/155 (6%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ +K +Q+ + + ++ + + + L LR + Sbjct: 253 LVADLRAATPTDAAKKAVPDTAAEQRLVADLRRRSAQALRNWVSREQRALTQLRSRPVLA 312 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I++ + + +S I + ++ L + TL RGY +Q Sbjct: 313 DPLKALITRSDEIQRARSALRRDVSRLISTETENIGHLGARLATLGPAATLARGYAVVQT 372 Query: 468 TN--NN---FITQKRNLATKTRILINFFDGQANAI 497 + + TR+ + DG A+ Sbjct: 373 VSTAGQPMEVLRSVDGAPAGTRLRVRVGDGAVTAV 407 >gi|226365339|ref|YP_002783122.1| exodeoxyribonuclease VII large subunit [Rhodococcus opacus B4] gi|226243829|dbj|BAH54177.1| exodeoxyribonuclease VII large subunit [Rhodococcus opacus B4] Length = 418 Score = 228 bits (581), Expect = 2e-57, Method: Composition-based stats. Identities = 103/370 (27%), Positives = 167/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--H 61 S S + V +S + ++ L V V G+I+ + A+ L+D Sbjct: 9 ASTAPSTAEQPWPVRTVSAKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVD 67 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + L EG ++ GK++ + G + + + G G LL +E Sbjct: 68 MSLSVTCSPQLLQNSPVPLTEGSRVVMFGKLSFYTGRGSVSLRVTEIRAIGIGELLARIE 127 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + + L EGLF + K P+PF+P I +IT A D+L R+P +R + Sbjct: 128 RLRALLAAEGLFDPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAQRRWPAVRFEVRNTP 187 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I +A LKE P D+IILARGGGS+EDL F+DE + RAI + Sbjct: 188 VQGATAVPQILDA------LKELDADPHVDVIILARGGGSVEDLLPFSDETLCRAIVACT 241 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L+D+ ADLRA TPT AA+ VP Q+ + L +R + + Sbjct: 242 TPVVSAIGHEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWV 301 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + + ++ L L + + L ++RL ++ I + H+ R+ Sbjct: 302 QRESHLISQLRSRPVLADPVRALDHRSDEVERLREAGRRDISRAIAVEGTTIEHLRARLT 361 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 362 TLGPAATLAR 371 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 58/161 (36%), Gaps = 9/161 (5%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + +++ ++ + +Q + ++ + + + + ++ LR + Sbjct: 256 LSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWVQRESHLISQLRSRP 315 Query: 410 K-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 + + +++L +S I T++ L + TL RGY+ Sbjct: 316 VLADPVRALDHRSDEVERLREAGRRDISRAIAVEGTTIEHLRARLTTLGPAATLARGYSV 375 Query: 465 IQ----DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 +Q D + + + T+I + DG A V+ K Sbjct: 376 VQRIVPDGDPEVLRSIDDAPPGTQIRVRVADGAIRAAVMGK 416 >gi|118616063|ref|YP_904395.1| exodeoxyribonuclease VII large subunit [Mycobacterium ulcerans Agy99] gi|118568173|gb|ABL02924.1| exodeoxyribonuclease VII (large subunit) XseA [Mycobacterium ulcerans Agy99] Length = 415 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 103/373 (27%), Positives = 174/373 (46%), Gaps = 13/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+P + NS ++P + V ++ + ++ L V V G+++ +S + L+D Sbjct: 1 MSPAAASNSAENP-FPVRAVAIRVAGWIDR-LGTVWVEGQLAQITIRPNSKTVFMVLRDP 58 Query: 61 HSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + + + + EG + +V GK + + G + + + + G G LL Sbjct: 59 AADMSLTVTCPRDLVLSAPVKLTEGTQVVVCGKPSFYTGRGTFSLRLNEIRAVGVGELLA 118 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ ++ L EGLF + K PIPF+P + +IT A RD+ + R+P +R + Sbjct: 119 RIERLRRLLDAEGLFDPRLKRPIPFLPNTVGLITGRASAAERDVTTAAATRWPAVRFAVR 178 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG +I A L+E + D+I++ARGGGS+EDL F+DE + RAIA Sbjct: 179 NTAVQGPNAVAQIVEA------LRELDSDLEVDVIVVARGGGSVEDLLLFSDETLCRAIA 232 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P+ISA+GHE D L D ADLRA TPT AA+ AVP Q + +L R + Sbjct: 233 ACRTPVISAVGHEPDNPLCDLVADLRAATPTDAAKKAVPDTAAEQRLVADLRRRSAQALR 292 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L L L + + L + R L ++ +I + + H+ Sbjct: 293 NWVSREQRALTQLRSHPVLADPLKALITRSDEIQRARSALRRDVSRLISTETENIGHLGA 352 Query: 356 RIKSDFLIHNIQK 368 R+ + + + Sbjct: 353 RLATLGPAATLAR 365 Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 8/136 (5%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R +++ + + R + + H + + I++ + Sbjct: 275 AEQRLVADLRRRSAQALRNWVSREQRALTQLR---SHPVLADPLKALITRSDEIQRARSA 331 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN--NN---FITQKRNLAT 481 + +S I + ++ L + TL RGY +Q + + Sbjct: 332 LRRDVSRLISTETENIGHLGARLATLGPAATLARGYAVVQTVSTAGQPMEVLRSVDGAPA 391 Query: 482 KTRILINFFDGQANAI 497 TR+ + DG A+ Sbjct: 392 GTRLRVRVGDGAVTAV 407 >gi|326798869|ref|YP_004316688.1| exonuclease VII, large subunit [Sphingobacterium sp. 21] gi|326549633|gb|ADZ78018.1| Exonuclease VII, large subunit [Sphingobacterium sp. 21] Length = 510 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 97/509 (19%), Positives = 200/509 (39%), Gaps = 30/509 (5%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNH-----SR 63 D +S++E++ ++ + + ++ E++ SGH Y L + + Sbjct: 6 ADKTIFSLAEVARSIQKTIADRYKSLYWIKAEMNKLNHYSHSGHCYPELLEKQEGKVIAE 65 Query: 64 IDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSG 114 I A +WK +I + GI L+ I+ + + I + PS G Sbjct: 66 IRATLWKSDYERINQRFVEIIKEPLKNGINILLQASIS-YDPVHGLSLHIVDIDPSYSLG 124 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFP 171 L + L EEGLF P P +PK IA+++ T + D L+ I + Sbjct: 125 ELEREKQASIALLKEEGLFEANKLLPFPLLPKRIAIVSVETSKGLADFLKIIDHNSFGYR 184 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 +FP +QG++ I + + ++ + R D++ + RGGG L +N+ + Sbjct: 185 FEYELFPALLQGEKSVISIIDQLAKIRLQLQ-----RFDVVAIIRGGGGEVGLSSYNNVL 239 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + +AIA IP+I+ IGH T+ T+++ A A TP+ A+ + + + E Sbjct: 240 LAKAIATFPIPVITGIGHATNETVSELVAYKNAITPSALADYLLQHFHNFARPVTYAEQV 299 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 L +L + LN+ ++ + L ++++L L + + ++ F Sbjct: 300 LRLKTRQLFDNQQQLLNNNIRYFRMASLNMLHENKHQLANLRNRTLQQSKYQLIQEKGSF 359 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + +++ + + + +Q I Q +++ + ++ I L Q+ Sbjct: 360 QRLKSQLSTQS-KRTLMEEKQAITFLGQRLKRENLHLSKRSRQVIRQ---IRDQLIRQSH 415 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 H + L + + + S+ R L ++ LKRGY+ Sbjct: 416 QIAKKHHAALTTLHKNLAPGIKRLLVEATKSLDNQERHLSILDPQHVLKRGYSI-MLFQG 474 Query: 471 NFITQKRNLATKTRILINFFDGQANAIVI 499 +T + L ++ G+ ++ V Sbjct: 475 KAVTDAQVLKVGDKVKTILAFGETDSQVT 503 >gi|206890630|ref|YP_002249463.1| exodeoxyribonuclease VII, large subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742568|gb|ACI21625.1| exodeoxyribonuclease VII, large subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 488 Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats. Identities = 106/510 (20%), Positives = 207/510 (40%), Gaps = 49/510 (9%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL---KDNH--SRIDAIIWK 70 ++S+ +K +++ + + EI+ +GH + L KDN ++ A+IW+ Sbjct: 10 TLSQYLTEIKELIQEVSDYQWIIAEIAKI-DCDKNGHYWIELVEKKDNEIIAQCGAVIWR 68 Query: 71 GTLNKIE-------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEK 122 G + I ++GI+ L IGK T +++ I + PS G + ++ Sbjct: 69 GNVETISNFYLKTGIEIQKGIKILFIGKATFHEKYG-FKLNILQIDPSFTIGEMALKKKE 127 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPV 179 ++L +EGL IP I + IA+++S + A D L+ + F +F Sbjct: 128 TIERLTKEGLIDKNKFIKIPLIIQKIAIVSSKSAAGYEDFLKILKENKYGFKFYTKLFDA 187 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ + NA + + D IIL RGGGS+ DL FND + + +A Sbjct: 188 FVQGETAVNSLINAFQRCSL-----EFKDFDAIILIRGGGSVADLAIFNDYELAKTMALM 242 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP+ + IGH D T+AD A + TP+ A+ + S + NL+ Sbjct: 243 PIPVFTGIGHTRDETVADCVASMSFKTPSEVAKFILDRALDFDSKIDNLKQ--------- 293 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + L+ + L + ++ + + N I++ I + Sbjct: 294 ------------RILHKVEAFLNTEISKNQSLQERFKLAVKNSGEKLSQKMNLIVSEIHN 341 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 L + ++ + +Q++ + L+ + E + + ++ + + I + Sbjct: 342 GILK-KVHSEKEFLFSLKQNLHKKTNYILKTKEV---EITNLSNRVKMKMRENITRGNFT 397 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNL 479 IK ++ L + + + + L + +N LKRGY+ N + + Sbjct: 398 IKSYKEKLFTKLKNTLALKNIEIERLREKLHLLSPENILKRGYSITYL-NGKVLKNSQEA 456 Query: 480 ATKTRILINFFDGQANAIVINKAPPKEQPT 509 + ++ I + G+ VINK +P Sbjct: 457 SIGVKVQIQLYKGKIYGQVINKEEDYGEPK 486 >gi|282850890|ref|ZP_06260264.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri 224-1] gi|282557842|gb|EFB63430.1| exodeoxyribonuclease VII, large subunit [Lactobacillus gasseri 224-1] Length = 379 Score = 228 bits (580), Expect = 3e-57, Method: Composition-based stats. Identities = 121/431 (28%), Positives = 188/431 (43%), Gaps = 55/431 (12%) Query: 84 IEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPF 143 ++ V G + + YQ +++ P+G G L L + ++KL +EGLF+ HK +P Sbjct: 1 MKVYVSGYVDVYGPQGSYQFYAQTMEPAGLGALYEQLRQLQEKLAKEGLFNKDHKKRLPL 60 Query: 144 IPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKE 202 P IAV+TS +GAVI DI+ + RFP + ++P KVQGDE I ++ Q+ Sbjct: 61 FPDRIAVVTSASGAVIHDIMVTANRRFPHAEIDLYPAKVQGDEAADTIVASLKQI----- 115 Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 + D++I+ RGGGS+EDLW FN+E +VR I +P+IS++GHETD TLAD AD Sbjct: 116 QAQGDKYDVVIIGRGGGSLEDLWPFNEEKVVRQIYAMQMPVISSVGHETDTTLADLVADA 175 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQT 320 RA TPT AAE A P + + ++ L ARL + I+ K L+ L K L + Sbjct: 176 RAATPTAAAEYATPNLADVLTKIVQLRARLYAAMQANIRAKRQILDRLRKAPVLQEPTRI 235 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++D L L + + + R+K+ + Sbjct: 236 YDQQIQQVDMLSHRLNQAISNQLQHDRSSVRLLQERLKALNPGR--------------RL 281 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 EQ+ ++ + A L K Sbjct: 282 EQLERERTFIVANLFSTMTAYL---------------------------------KDQRN 308 Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 ++ T + L + T+ RGY D N +T L ++ ++F DGQ V N Sbjct: 309 KLNRTMQQLDDISPLKTIGRGYVYTTDQEGNTVTSVDKLEIDEKLKLHFKDGQVQVNVEN 368 Query: 501 KAPPKEQPTKK 511 K+ +K Sbjct: 369 IRREKDGNQEK 379 >gi|311740744|ref|ZP_07714571.1| exodeoxyribonuclease VII large subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|311304264|gb|EFQ80340.1| exodeoxyribonuclease VII large subunit [Corynebacterium pseudogenitalium ATCC 33035] Length = 413 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 178/370 (48%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +Q + + V +++ +K +E L ++ V G+++ + +Y +L+D Sbjct: 1 MNQPANTPDTPWPVGKVNDQVKGWIER-LGYLWVEGQLTQINFKPTWKLSYLTLRDVQQE 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + L + ++G +V GK + G + + + G G LL +E Sbjct: 60 KSVQLTCPSSMLQSLSAPLKDGDRVIVHGKPAFYAGRGSFSLWTTEIRHVGIGDLLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K +++L EGLF K P+P++P I +IT A RD++ R+P ++ + Sbjct: 120 KLRQQLSAEGLFDPARKRPLPYLPHKIGLITGRGSAAERDVMAVAHDRWPAVQFRVLNTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E+ +A+ QL+ P D+II+ARGGGS+EDL F++E + RA+A + Sbjct: 180 VQGANTVPEVIDALQQLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAAAG 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP ++ + +R+ + + Sbjct: 234 TPVVSAIGHEPDSPVLDNVADLRAATPTDAAKRVVPSVAEERAIVAEARSRMAAALRGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L+++ + + + R ++R + +E+++ R+ RH + R+ Sbjct: 294 ERERRGLDNIRSRPVMADPMTPIRARREEVERTRATVRREIEVMVERETRHVESLRARVS 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPSATLAR 363 Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 41/137 (29%), Gaps = 7/137 (5%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + R + E + + ++ + + + I +++ Sbjct: 271 VAEERAIVAEARSRMAAALRGWVERERRGLDNIRSR--PVMADPMTPIRARREEVERTRA 328 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--DTNN---NFITQKRNLA 480 + + ++ V + + TL RGY+ +Q + +T Sbjct: 329 TVRREIEVMVERETRHVESLRARVSALGPSATLARGYSIVQVVPKDGSGPEVVTSYEQSP 388 Query: 481 TKTRILINFFDGQANAI 497 ++ I DG A+ Sbjct: 389 PGAQLRIRVGDGSITAV 405 >gi|240171093|ref|ZP_04749752.1| exodeoxyribonuclease VII large subunit [Mycobacterium kansasii ATCC 12478] Length = 415 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 106/408 (25%), Positives = 183/408 (44%), Gaps = 16/408 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M S NS ++P + V ++ + ++ L V V G+++ +S + L+D Sbjct: 1 MTRASDANSAENP-FPVRAVAIRVASWIDR-LGTVWVEGQLAQITMRPNSKTVFMVLRDP 58 Query: 61 HS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + ++ + + EG + +V GK + + G + + + + G G LL Sbjct: 59 AADMSLNVTCPRDLILGAPVKLTEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLA 118 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ ++ L EGLF + K PIPF+P +I +IT A RD+ + R+P +R + Sbjct: 119 RIERLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVTTVAATRWPAVRFAVR 178 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG +I A+ L+ E D+I+LARGGGS+EDL F+DE + RAI+ Sbjct: 179 NTAVQGPNAVVQIVEALRDLDRHFE------VDVIVLARGGGSVEDLLPFSDETLCRAIS 232 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P+ISA+GHE D L D ADLRA TPT AA+ VP Q +++L R + Sbjct: 233 ACRTPVISAVGHEPDNPLCDLVADLRAATPTDAAKRVVPDTAAEQRLIVDLRRRSAQALR 292 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L L L + + L+ + R + ++ +I + H+ Sbjct: 293 NWVSREERALAHLRNRPVLADPLKALTARHDEIQRARSAVRRDINRLIAAETERVGHLSA 352 Query: 356 RIKSDFLIHNIQKNR---QHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 R+ + + + Q + Q + H + ++A Sbjct: 353 RLTTLGPAATLARGYAVVQRLSAAGQPTGVLRSVHDAPAGTRLRVRVA 400 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 52/154 (33%), Gaps = 10/154 (6%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ ++ +Q+ I + ++ + + + L LR + Sbjct: 253 LVADLRAATPTDAAKRVVPDTAAEQRLIVDLRRRSAQALRNWVSREERALAHLRNRPVLA 312 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466 + H I++ + + ++ I + V + L + TL RGY +Q Sbjct: 313 DPLKALTARHDEIQRARSAVRRDINRLIAAETERVGHLSARLTTLGPAATLARGYAVVQR 372 Query: 467 -DTNNN---FITQKRNLATKTRILINFFDGQANA 496 + + TR+ + DG A Sbjct: 373 LSAAGQPTGVLRSVHDAPAGTRLRVRVADGAIAA 406 >gi|111022831|ref|YP_705803.1| exodeoxyribonuclease VII large subunit [Rhodococcus jostii RHA1] gi|110822361|gb|ABG97645.1| probable exodeoxyribonuclease VII large subunit [Rhodococcus jostii RHA1] Length = 418 Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats. Identities = 103/369 (27%), Positives = 166/369 (44%), Gaps = 12/369 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HS 62 S S + V +S + ++ L V V G+I+ + A+ L+D Sbjct: 10 STGPSTAEQPWPVRTVSAKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVDM 68 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + L EG ++ GK++ + G + + + G G LL +E+ Sbjct: 69 SLSVTCSPQLLQNSPVPLTEGSRVVMFGKLSFYTGRGSVSLRVTEIRAIGIGELLARIER 128 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 + L EGLF + K P+PF+P I +IT A D+L R+P +R + V Sbjct: 129 LRALLAAEGLFDPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAQRRWPAVRFEVRNTPV 188 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +I +A LKE P D+IILARGGGS+EDL F+DE + RAI Sbjct: 189 QGATAVPQILDA------LKELDADPHVDVIILARGGGSVEDLLPFSDETLCRAIVACRT 242 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHE D L+D+ ADLRA TPT AA+ VP Q+ + L +R + ++ Sbjct: 243 PVVSAIGHEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWVQ 302 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + ++ L L + + L ++RL ++ I + H+ R+ + Sbjct: 303 RESDLISQLRSRPVLADPLRALDHRSDEVERLWEAGRRDISRAIAAESTTIEHLRARLTT 362 Query: 360 DFLIHNIQK 368 + + Sbjct: 363 LGPAATLAR 371 Score = 84.8 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 9/161 (5%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + +++ ++ + +Q + ++ + + + + ++ LR + Sbjct: 256 LSDHVADLRAATPTDAAKRVVPDAVAEQALVGELRSRSAAALRNWVQRESDLISQLRSRP 315 Query: 410 -----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 + + +++L +S I + T++ L + TL RGY+ Sbjct: 316 VLADPLRALDHRSDEVERLWEAGRRDISRAIAAESTTIEHLRARLTTLGPAATLARGYSV 375 Query: 465 IQ----DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 +Q D + + + T+I + DG A V+ K Sbjct: 376 VQRIVPDGDPEVLRSVDDAPPGTQIRVRVADGAIRAAVMGK 416 >gi|331694829|ref|YP_004331068.1| Exodeoxyribonuclease 7 large subunit [Pseudonocardia dioxanivorans CB1190] gi|326949518|gb|AEA23215.1| Exodeoxyribonuclease 7 large subunit [Pseudonocardia dioxanivorans CB1190] Length = 423 Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62 S + + V ++ + V+ L V V G+++ +G A+ +L+D + Sbjct: 1 MSDAPTSPESPWPVRTVARKIAEWVDR-LGAVWVEGQLAQVTARPGTGTAFLTLRDPAAD 59 Query: 63 -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + G + + EG +V GK + F G + ++ + G G LL +E Sbjct: 60 VSLQLTCPVGLVREGGPAVTEGNRVVVHGKPSFFLGRGTLSLRVDRIQAVGLGELLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF K P+PF+P I +IT A D++ + R+P +R I Sbjct: 120 RLRRLLAAEGLFDVARKRPLPFLPGRIGLITGRASAAEHDVVSNATARWPSVRFRIEHTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 QG +I A+ L+ P D+I+LARGGGS+EDL F+DE + RA+A++ Sbjct: 180 TQGALAVPQIVEALGVLDR------DPDVDVIVLARGGGSVEDLLPFSDETLCRAVADAR 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D+ ADLR TPT A VP + + L R + + Sbjct: 234 TPVVSAIGHEPDTPLVDHVADLRCSTPTEAGRRLVPDLAEESARISGLRDRARRALHGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L +L L + L L+RL L+ + + H+ R+ Sbjct: 294 DREQRLLVALRARPVLADPLGGLQVRHEELERLRERTHAALDRGLAARATEIEHLRARLT 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 TLGPAATLAR 363 Score = 94.1 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 15/170 (8%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 ++ ++ + E+ I + + R + + +L LR + Sbjct: 253 ADLRCSTPTEAGRRLVPDLAEESARISGLRDRARRALHGWVDREQRLLVALRARPVLADP 312 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-T 468 + H +++L R L + + T + L + TL RGY +Q Sbjct: 313 LGGLQVRHEELERLRERTHAALDRGLAARATEIEHLRARLTTLGPAATLARGYAVVQRVP 372 Query: 469 NNN---------FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509 + + + R+ I DG A V + Sbjct: 373 DGEAADRGVAWPVLRSAGEVGEGDRLRIRVADGAVAARVEPATAAGQDGA 422 >gi|291461166|ref|ZP_06027321.2| exodeoxyribonuclease VII, large subunit [Fusobacterium periodonticum ATCC 33693] gi|291378434|gb|EFE85952.1| exodeoxyribonuclease VII, large subunit [Fusobacterium periodonticum ATCC 33693] Length = 392 Score = 227 bits (578), Expect = 5e-57, Method: Composition-based stats. Identities = 114/349 (32%), Positives = 182/349 (52%), Gaps = 11/349 (3%) Query: 37 VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFP 96 + GEIS + SGH YFS+KD+ S+I + + +I +EG + G + + Sbjct: 17 IEGEISNIT-YYKSGHLYFSVKDSKSQIKCAAFNYKMKRIPEDLKEGDAIKLFGDVGFYE 75 Query: 97 GSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155 ++Q+++ + G L LEK K+K+ E+G F + HK +P PK I V+T+ T Sbjct: 76 VKGEFQVLVRHIEKQNALGALFAKLEKVKEKMAEKGYFDESHKKELPRFPKNIGVVTALT 135 Query: 156 GAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL 214 GA ++DI++ RF + + I+P KVQG +EI I LN ++E D+II Sbjct: 136 GAALQDIIKTTRKRFNSINIYIYPAKVQGAGAEQEIIKGIETLNKIEE------IDLIIA 189 Query: 215 ARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMA 274 RGGGSIEDLW FN+E + A NS PIISA+GHE D+ L+D AD RA TPT A E++ Sbjct: 190 GRGGGSIEDLWAFNEEEVAMAFFNSEKPIISAVGHEIDFLLSDLTADKRAATPTQAIELS 249 Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINT--LNSLLKALPNSDQTLSCSRYRLDRLP 332 VP +E L SL + + L ++ ++ + L N T++ R + Sbjct: 250 VPERESLVKSLEDKKIYLAKLLKSYLEDMKKELLIRIENYHLKNFPSTINNYRELIVEKE 309 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 +L ++ ++ +K F I+++ I+ +++ K + IE Sbjct: 310 EDLTKAIKNLLEQKRHIFEVKIDKVSVLNPINTLKRGYSVSQIKNKRIE 358 Score = 67.5 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 49/163 (30%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + ++ I+ + + +E + + ++ L Sbjct: 224 HEIDFLLSDLTADKRAATPTQAIELSVPERESLVKSLEDKKIYLAKLLKSYLEDMKKELL 283 Query: 404 ML-----REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + I I + + + + ++ + + NTL Sbjct: 284 IRIENYHLKNFPSTINNYRELIVEKEEDLTKAIKNLLEQKRHIFEVKIDKVSVLNPINTL 343 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGY+ Q N I ++ + +G+ +IV K Sbjct: 344 KRGYSVSQIKNKR-IEVLDDIEVNDEMTTILKNGKLISIVKEK 385 >gi|238019307|ref|ZP_04599733.1| hypothetical protein VEIDISOL_01171 [Veillonella dispar ATCC 17748] gi|237864006|gb|EEP65296.1| hypothetical protein VEIDISOL_01171 [Veillonella dispar ATCC 17748] Length = 407 Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats. Identities = 116/383 (30%), Positives = 180/383 (46%), Gaps = 14/383 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++++L+ +K ++ L +V V G I + HSSGH YFSLKD S ID +W Sbjct: 3 VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61 Query: 72 TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ V + + + +I + L + K++L Sbjct: 62 TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGSKSPLQLEFDALKRELTA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F D HK +P++ I ++TS +GAV+ DIL R P ++ +F V VQG+ Sbjct: 122 LGYFDDSHKQSLPYMASCIGIVTSQSGAVLHDILHVSERRNPLVQFKLFSVPVQGNTVGP 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I + + II+ RGGGS+EDLW FND +V AI N++ PIISA+G Sbjct: 182 VIARGIAAADADPDVDV------IIVGRGGGSMEDLWCFNDRSVVEAIYNANTPIISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL DY AD R TP+ AAEMAV LQ L E L+ I ++ K L Sbjct: 236 HETDYTLCDYVADARGATPSHAAEMAVLPITTLQDQLSEKEEYLHEFIRYTLQQKRTDLT 295 Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L + L L + L + + + + +++S + + Sbjct: 296 LLFNRRLGIPALQFLHKQKTHLQELSQSLTNATKERCNTEKHSLALLAQQLESLNPLQMM 355 Query: 367 QKNRQHILEKQQHIEQIVKQHLR 389 K + K + I + + H + Sbjct: 356 VKGFAKVEHKDKPITSVTQLHPK 378 Score = 93.3 bits (230), Expect = 8e-17, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 6/155 (3%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415 H + I Q + + + +I ++K L +L + + Sbjct: 253 TPSHAAEMAVLPITTLQDQLSEKEEYLHEFIRYTLQQKRTDLTLLFNRRLGIPALQFLHK 312 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 TH+++L + + + S+++ + L+S + +G+ ++ + IT Sbjct: 313 QKTHLQELSQSLTNATKERCNTEKHSLALLAQQLESLNPLQMMVKGFAKVEHKD-KPITS 371 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 L K I + DG A V K Sbjct: 372 VTQLHPKDDIRVTLADGYVTATVKEAHKDGRITKK 406 >gi|269955739|ref|YP_003325528.1| exodeoxyribonuclease VII large subunit [Xylanimonas cellulosilytica DSM 15894] gi|269304420|gb|ACZ29970.1| exodeoxyribonuclease VII, large subunit [Xylanimonas cellulosilytica DSM 15894] Length = 412 Score = 226 bits (577), Expect = 6e-57, Method: Composition-based stats. Identities = 92/371 (24%), Positives = 169/371 (45%), Gaps = 12/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P S + +SV+ +S ++ + + L V V G++ + S Y +L+D Sbjct: 9 PASAPLTTPDAPWSVAVVSEKIRGWI-ARLGDVWVEGQVVQFTERPGSWMQYLTLRDVEA 67 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + I L E+G LV K + G+ + ++ + + P G G LL + Sbjct: 68 EASLSVKIPSRALATSTARIEKGARVLVHAKPDFWTGNGSFALLADEVRPVGVGELLARI 127 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E ++ L EGLF + K +PF+P ++ ++T D+++ R+P +R + V Sbjct: 128 EHLRRILAAEGLFDESRKTRLPFLPHVVGLVTGRNSDAKHDVMKNALLRWPQVRFEVREV 187 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +E+ AI +L+ P +++++ARGGG++EDL F+DE +VRA A Sbjct: 188 AVQGPSAVREVKAAIAELDAR------PEVEVVVVARGGGALEDLLPFSDESLVRAAAAC 241 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D L D ADLRA TPT AA+ VP + + + + + Sbjct: 242 RTPLVSAIGHEQDCPLLDLVADLRASTPTDAAKRVVPDVAEERRRVEQARRTMRHALRAR 301 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + L+ + L + + + H L + R + ++ Sbjct: 302 LDREQHGLDGVRSRPVLARPESMIEHREREIAYRVTHARHVLNAALLRASGEIGRLEAQV 361 Query: 358 KSDFLIHNIQK 368 ++ +++ Sbjct: 362 RALSPASTLER 372 Score = 96.0 bits (237), Expect = 1e-17, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 58/162 (35%), Gaps = 5/162 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA--- 400 + ++ +++ ++ + E+++ +EQ + + + Sbjct: 251 HEQDCPLLDLVADLRASTPTDAAKRVVPDVAEERRRVEQARRTMRHALRARLDREQHGLD 310 Query: 401 --ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + ++ I + I +T +L+ + + +++ + +TL Sbjct: 311 GVRSRPVLARPESMIEHREREIAYRVTHARHVLNAALLRASGEIGRLEAQVRALSPASTL 370 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 +RGY +Q + + + + A T + + G+ A V Sbjct: 371 ERGYAVVQRPDGHVVRSPDDAAPGTGVRLRLAAGELAATVDG 412 >gi|300869340|ref|ZP_07113930.1| Exodeoxyribonuclease 7 large subunit [Oscillatoria sp. PCC 6506] gi|300332639|emb|CBN59128.1| Exodeoxyribonuclease 7 large subunit [Oscillatoria sp. PCC 6506] Length = 391 Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats. Identities = 116/340 (34%), Positives = 176/340 (51%), Gaps = 16/340 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSL- 57 M + SV+ ++ +++ ++E + L V V GE+S SG +F+L Sbjct: 1 MTSLIPDRLIPDTALSVAGVTSYIQALLEDDSYLRLVWVTGEVSSVSEY-RSG-LFFTLC 58 Query: 58 -KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +DN I + W K+ LP +G + +V+G I + +YQ+ + +P+G G Sbjct: 59 DRDNPVVIRCVTWNSQREKLVQLPVKGEQLIVLGSIRVYKARGEYQLNVWQALPAGEGLQ 118 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 ++ + +L EGLF K +P P+ +AV+TSPT A DI + ++ R+P LRV+ Sbjct: 119 ALRYQQLRSRLDAEGLFDPTRKRSLPIHPQTVAVVTSPTAAAWGDIQRTLTQRYPGLRVL 178 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 + P VQG+ P IA AI ++ R D+IILARGGG++EDL FNDE +VRA Sbjct: 179 LSPALVQGELAPASIATAIERV------ELDGRADVIILARGGGAVEDLACFNDERVVRA 232 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IAN SIP I+ IGHE D +LAD AD A TPT AAE VP +L L Sbjct: 233 IANCSIPTIAGIGHERDESLADLVADKTAHTPTAAAEKVVPDIANLYIQHRQRVRTLIEA 292 Query: 296 IIRL---IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 + + + + L LK LP++ ++L + + L Sbjct: 293 VEQRLYKSEAQCQGLKHRLKRLPSTSRSLQQATVQCQMLR 332 Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 15/111 (13%), Positives = 37/111 (33%), Gaps = 2/111 (1%) Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSFAY 454 + + L E + R++ + L R++ S ++ + L + Sbjct: 281 QHRQRVRTLIEAVEQRLYKSEAQCQGLKHRLKRLPSTSRSLQQATVQCQMLREKLAALDP 340 Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + L+RGY ++ + + LA + I G ++ + Sbjct: 341 QAVLQRGYAIVKQNDGSLTRSTEGLAPGEELTIKLNRGMLKVKIVEISKST 391 >gi|332706276|ref|ZP_08426344.1| exodeoxyribonuclease VII large subunit [Lyngbya majuscula 3L] gi|332354981|gb|EGJ34453.1| exodeoxyribonuclease VII large subunit [Lyngbya majuscula 3L] Length = 411 Score = 226 bits (576), Expect = 8e-57, Method: Composition-based stats. Identities = 113/375 (30%), Positives = 187/375 (49%), Gaps = 15/375 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M + + SV+ L+ +++ ++E L V V GE+S +F+L+ Sbjct: 1 MASSTINSLFSEAIVSVAGLTDYIQELLEEDDQLHRVWVIGEVSSSNHHPKG--MFFTLQ 58 Query: 59 DNHSR--IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 D ++ I + W+ L+K+ LP G + +++G + +P +YQ+ + +P+G G Sbjct: 59 DGDAKATIRCVAWRSQLSKLVQLPVIGEQLIILGSLRVYPQRGQYQLNVWQALPAGEGLQ 118 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVI 175 + +++ EGLF Q K P+P P+ IAV+TSP A DI + + R+P LRV+ Sbjct: 119 ALRSRQLRQRFEAEGLFDPQRKRPLPIHPETIAVVTSPQAAAWGDIKRTLQQRYPGLRVL 178 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 P +VQG+ I NAI ++ R ++ILARGGG+ EDL FNDE +VRA Sbjct: 179 FSPAQVQGELAIASIVNAIDRVER------DGRAKLLILARGGGASEDLACFNDERVVRA 232 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA SIP+I+ IGH+ D +LAD AD A TPT AAE AVP L + + L Sbjct: 233 IAQCSIPVITGIGHQRDESLADLVADYSAHTPTAAAEQAVPELITLYAEHQQRQTSLYQA 292 Query: 296 IIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + + L+ L L + DQ L + + + L + + +H + Sbjct: 293 VTQITQASRHQLHHLRTRLRHLALDQQLHQEQNAMAFQHQRLLQVTSKRLSQGIQHCQLL 352 Query: 354 INRIKSDFLIHNIQK 368 ++ + +Q+ Sbjct: 353 KEKLNTLDPQKVLQR 367 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 18/163 (11%), Positives = 53/163 (32%), Gaps = 5/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ ++ + ++ ++ +Q + + + LH Sbjct: 246 HQRDESLADLVADYSAHTPTAAAEQAVPELITLYAEHQQRQTSLYQAVTQITQASRHQLH 305 Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 LR + + ++ + R+ + S ++ + L + + L Sbjct: 306 HLRTRLRHLALDQQLHQEQNAMAFQHQRLLQVTSKRLSQGIQHCQLLKEKLNTLDPQKVL 365 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 +RGY ++ ++ + +LA + I +GQ +I Sbjct: 366 QRGYALVRTSDGTIASSTGHLAPGEELQIQLGEGQVKVKIIEI 408 >gi|328884767|emb|CCA58006.1| Exodeoxyribonuclease VII large subunit [Streptomyces venezuelae ATCC 10712] Length = 405 Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 163/366 (44%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRID 65 + V E+S + ++ L + V G+I+ +G + +L+D I Sbjct: 4 TTSAEAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGAGVVFLTLRDPSYDISIG 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V K + + + + P G G LL LE+ K+ Sbjct: 63 VTCYRQVFDAVADVVSEGARVVVRAKPEWYAPRGQLSLRAVEIKPVGIGELLARLEQLKR 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K P+PF+P I ++ A RD+L+ R+P + + V VQG Sbjct: 123 SLASEGLFALDRKKPLPFLPHRIGLVCGRASAAERDVLENARRRWPAVAFEVRNVAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + ++ A+ E D+II+ARGGGS+EDL F+DE +VRA+A+ P++ Sbjct: 183 KAVPQVVQAVK------ELDAHEEVDVIIVARGGGSVEDLLPFSDEQLVRAVADCRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R + L+ + Sbjct: 237 SAIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELDRVRGLRDRALRTVRGLLDREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + L L L ++ R +H R+++ Sbjct: 297 RGLAHALARPVMEHPQRMVEVREDELVALLARSRRVLGHLLDRADSELSHTRARVRALSP 356 Query: 363 IHNIQK 368 +++ Sbjct: 357 AATMER 362 Score = 87.1 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 42/119 (35%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + E+ A+ + E + + + L+ R +L H + Sbjct: 281 RDRALRTVRGLLDREERGLAHALARPVMEHPQRMVEVREDELVALLARSRRVLGHLLDRA 340 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 + +S T +++ + T++RGY +Q + + + +A + +G+ Sbjct: 341 DSELSHTRARVRALSPAATMERGYAVLQRADGSVVRSPGEVAEGEDLRARVAEGEFAVR 399 >gi|41408784|ref|NP_961620.1| exodeoxyribonuclease VII large subunit [Mycobacterium avium subsp. paratuberculosis K-10] gi|81831691|sp|Q73WH4|EX7L_MYCPA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|41397142|gb|AAS05003.1| XseA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 415 Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + + V ++ + ++ L V V G+++ S + L+D + Sbjct: 5 ATSEPNSAENPFPVRAVAIRVAGWIDR-LGTVWVEGQLAQVSLRPDSKTVFMVLRDPAAD 63 Query: 64 ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + + EG + +V GK + + G + + + + G G LL +E Sbjct: 64 MSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF + K PIPF+P +I +IT A RD+ + R+P +R + Sbjct: 124 RLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVKTVAAGRWPAVRFAVRNTA 183 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I A L+E P D+I+LARGGGS+EDL F+DE + RAIA Sbjct: 184 VQGPNAVAQIVEA------LRELDRDPEVDVIVLARGGGSVEDLLPFSDETLCRAIAACR 237 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P+ISA+GHE D L D AD+RA TPT AA+ VP Q + +L R + + Sbjct: 238 TPVISAVGHEPDNPLCDLVADVRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWV 297 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L + L + L+ + R + H++ + + H+ R+ Sbjct: 298 SREQRALAQIRSRPVLAEPLRALTARAEEVHRARSAIRHDVTRLTAAETERIGHLRARLA 357 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 358 TLGPAATLAR 367 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 6/133 (4%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R +++ + + R + + + + + + + + Sbjct: 277 AEQRLIDDLRRRSAQALRNWVSREQRALAQIR---SRPVLAEPLRALTARAEEVHRARSA 333 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNN-NFITQKRNLATKT 483 I ++ + + L + TL RGY +Q + + + T Sbjct: 334 IRHDVTRLTAAETERIGHLRARLATLGPAATLARGYAVVQTVGAGGPHVLRSVGDAPAGT 393 Query: 484 RILINFFDGQANA 496 R+ + DG A Sbjct: 394 RLRVRVADGAVAA 406 >gi|254390230|ref|ZP_05005449.1| exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus ATCC 27064] gi|294814787|ref|ZP_06773430.1| Exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus ATCC 27064] gi|326443166|ref|ZP_08217900.1| exodeoxyribonuclease VII large subunit [Streptomyces clavuligerus ATCC 27064] gi|197703936|gb|EDY49748.1| exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus ATCC 27064] gi|294327386|gb|EFG09029.1| Exodeoxyribonuclease 7 large subunit [Streptomyces clavuligerus ATCC 27064] Length = 402 Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats. Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 12/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDA 66 + V E+S + ++ L + V G+I+ G + +L+D + Sbjct: 5 TSPDAPLPVGEVSRLIGGWIDR-LGAIWVEGQITQLSRRPGQGVVFLTLRDPSHDISVSV 63 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ + + + EG +V K + + + L P G G LL LE+ K+ Sbjct: 64 TCYRQVFDAVADVVSEGARVVVHAKPEWYAPRGQLSLRAAELRPVGVGELLARLEQLKRS 123 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF + K +PF+P + ++ A RD+L+ R+P +R + V VQG Sbjct: 124 LAAEGLFGPERKKRLPFLPHRVGLVCGRASAAERDVLENARRRWPAVRFEVRNVAVQGVH 183 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 ++ A+ +L+ L P D+II+ARGGGS+EDL F+DE +VRA+A P++S Sbjct: 184 AVPQVVGAVQELDAL------PEVDVIIVARGGGSVEDLLPFSDEQLVRAVAGCRTPVVS 237 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHE D L D ADLRA TPT AA+ VP + L R + L+ + Sbjct: 238 AIGHEPDSPLLDLVADLRASTPTDAAKKVVPDVGEELERVRQLRGRALRTVRSLLDREER 297 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L + + ++ L L ++ R H R+ + Sbjct: 298 GLAHALARPVLERPHRMVEEREAEVEALAARGRRVLGHLLDRAESELAHTRARVVALSPA 357 Query: 364 HNIQK 368 +++ Sbjct: 358 ATLER 362 Score = 84.8 bits (208), Expect = 4e-14, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 55/153 (35%), Gaps = 5/153 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK-----IAILHMLRE 407 ++ +++ +K + E+ + + Q+ + LR + + A+ + E Sbjct: 250 LVADLRASTPTDAAKKVVPDVGEELERVRQLRGRALRTVRSLLDREERGLAHALARPVLE 309 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + ++ L R +L H + + ++ T + + + TL+RGY +Q Sbjct: 310 RPHRMVEEREAEVEALAARGRRVLGHLLDRAESELAHTRARVVALSPAATLERGYAVLQR 369 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 + + +A + G V Sbjct: 370 PDGAVVRDPDEVAAGEELRARVARGTFPVRVAE 402 >gi|68536536|ref|YP_251241.1| exodeoxyribonuclease VII large subunit [Corynebacterium jeikeium K411] gi|123775684|sp|Q4JU84|EX7L_CORJK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|68264135|emb|CAI37623.1| exodeoxyribonuclease large subunit [Corynebacterium jeikeium K411] Length = 436 Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 19/358 (5%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65 + ++V +L+ +K+ ++ L + V G+++ + +Y +L+D + + + Sbjct: 4 PNSPEAPWAVGQLNDQVKNWIQR-LGFIWVEGQVTQVNMKSTWRFSYITLRDVNLEASVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + L + ++G +V GK + + + + + + G G LL +E+ KK Sbjct: 63 LTVETSALKNLATPVKDGDRIVVHGKPSFYSKRGSFSLWVTEIRQVGIGQLLAQIEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 + EGLF + K P+PF+P + +IT A RD+++ R+P +R + VQG Sbjct: 123 AMFAEGLFDPRLKTPLPFLPTTVGLITGRGSAAERDVMEVAKRRWPAVRFRVINTAVQGP 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + ++ +A L+E D+II+ARGGGS+EDL F++E +VR ++ P++ Sbjct: 183 KTVPQVVDA------LQELERDSAVDVIIVARGGGSVEDLLPFSEETLVREVSRLRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L DY AD+RA TPT AA+ VP + R + + ++ Sbjct: 237 SAIGHEPDNPLLDYVADVRAATPTDAAKTVVPDVVQELRIISEARQRGAGALRNWVAHER 296 Query: 305 NT---------LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + + ++ + R DR +L I N + Sbjct: 297 KGLAQIRTRPVMADPSLPVARQQDIIAEALQRKDRALGVHVRSLRSSIESLKAQVNAL 354 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 7/147 (4%) Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 Q LR +++ +A + + I + + R + L ++S Sbjct: 281 RQRGAGALRNWVAHERKGLAQIRTRPVMADPSLPVARQQDIIAEALQRKDRALGVHVRSL 340 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQ 493 +S+ + + TL RGY+ + +D + +T + +++ I DG Sbjct: 341 RSSIESLKAQVNALGPSQTLARGYSIVQVIPRDKSGAQVVTTVDQVTPGSQLRIRVPDGS 400 Query: 494 ANAIVINKAPPKEQPTKKCQLHNNKRE 520 A + K + + Sbjct: 401 ITAAAMGVQAAPGGVMNKNSNTTDSTD 427 >gi|260577673|ref|ZP_05845609.1| exodeoxyribonuclease, large subunit [Corynebacterium jeikeium ATCC 43734] gi|258604219|gb|EEW17460.1| exodeoxyribonuclease, large subunit [Corynebacterium jeikeium ATCC 43734] Length = 439 Score = 226 bits (575), Expect = 9e-57, Method: Composition-based stats. Identities = 87/366 (23%), Positives = 169/366 (46%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65 + ++V +L+ +K+ ++ L + V G+++ + +Y +L+D + + + Sbjct: 4 PNSPEAPWAVGQLNDQVKNWIQR-LGFIWVEGQVTQVNMKSTWRFSYITLRDVNLEASVS 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + L + ++G +V GK + + + + + + G G LL +E+ KK Sbjct: 63 LTVETSALKNLATPVKDGDRIVVHGKPSFYSKRGSFSLWVTEIRQVGIGQLLAQIEQLKK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGD 184 + EGLF + K +PF+P + +IT A RD+++ R+ +R + VQG Sbjct: 123 AMFAEGLFDPRLKATLPFLPTTVGLITGRGSAAERDVMEVAKRRWLAVRFRVINTAVQGP 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 + ++ +A L E P D+II+ARGGGS+EDL F++E +VR ++ P++ Sbjct: 183 KTVPQVVDA------LHELEQDPAVDVIIVARGGGSVEDLLPFSEEALVREVSRLRTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L DY AD+RA TPT AA+ VP + R + + ++ Sbjct: 237 SAIGHEPDNPLLDYVADVRAATPTDAAKTVVPDVVQELRIISEARQRGAGALRNWVSHER 296 Query: 305 NTLNSLLKALPNSDQTLSCSRYR--LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L + +D +L +R + + + + L + + + ++ + Sbjct: 297 KGLAQIRTRPVMADPSLPVTRQKDIIAEALQRKDRALGVHVRSLRSSIESLKAQVNALGP 356 Query: 363 IHNIQK 368 + + Sbjct: 357 SQTLAR 362 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 47/146 (32%), Gaps = 7/146 (4%) Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 Q LR +++ +A + + I + + R + L ++S Sbjct: 281 RQRGAGALRNWVSHERKGLAQIRTRPVMADPSLPVTRQKDIIAEALQRKDRALGVHVRSL 340 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQ 493 +S+ + + TL RGY+ + +D + +T + +++ I DG Sbjct: 341 RSSIESLKAQVNALGPSQTLARGYSIVQVIPRDKSGAQVVTTVDQVDPGSQLRIRVPDGS 400 Query: 494 ANAIVINKAPPKEQPTKKCQLHNNKR 519 A + + + Sbjct: 401 ITAAAMGVQAAPGGVMNRNSNTTDST 426 >gi|298376911|ref|ZP_06986865.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_19] gi|301311103|ref|ZP_07217032.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 20_3] gi|298265895|gb|EFI07554.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_19] gi|300831166|gb|EFK61807.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 20_3] Length = 444 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 97/519 (18%), Positives = 191/519 (36%), Gaps = 96/519 (18%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59 M P S + S+ EL+ ++ + VR E+S R SSGH Y + Sbjct: 1 MRPNLNNLSGEKEALSLLELNTRIRGALSRAFPETCWVRAEMSDVRVNTSSGHCYLEFVE 60 Query: 60 NH-------SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104 + +++ IW T ++ F E G + LV + + Sbjct: 61 KNVQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119 Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163 + + P+ G ++ + ++L EEG+F+ + P P +P+ IA+ITSPT A D + Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELPFPLLPRRIAIITSPTAAGYEDFM 179 Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220 +++ +P +FP +QG+ + A+ ++ ++ D++++ RGGG+ Sbjct: 180 NQLTRNKGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234 Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280 DL F+ ++ A +PII+ IGHE D T+ D A R TPT AE + Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERDDTVVDLVAHTRMKTPTAVAEFLI----- 289 Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340 + + + L R + L ++ + Sbjct: 290 -------------------------------SRMDSVGEELESLRQDVSLLAMDILSRQK 318 Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + ++ + I++NR + + + + Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASRLPAM---------------AS 355 Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 L R+ ++ R+ ++ K+ + +T + ++ + LKR Sbjct: 356 GLLSRRQSV----------LENTELRLRNGITSKLSESGRFIQLTEQFIKMASPDYILKR 405 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 GY+ + I +L + F DG+ +I+ Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443 >gi|308178026|ref|YP_003917432.1| exodeoxyribonuclease VII large subunit [Arthrobacter arilaitensis Re117] gi|307745489|emb|CBT76461.1| exodeoxyribonuclease VII large subunit [Arthrobacter arilaitensis Re117] Length = 420 Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 184/371 (49%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + + LS LK +E++ V V G++ +GHAY +L+D + Sbjct: 10 PATAGQTTADNPWPLRLLSEKLKIHIENS-PVVWVEGQL--LEANVRNGHAYLTLRDVDA 66 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 IW T+ K++ P+ G + K + + + + + L P G G LL L Sbjct: 67 DFSFSVTIWASTMRKLDSTPQVGSRVVAQVKPSFYAKTGRLSLNASDLRPVGLGELLVRL 126 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L EGLFS +HK P+P +P I +IT +D+L+ + R+P ++ + Sbjct: 127 ERLRQALGAEGLFSPEHKRPLPVLPHRIGLITGRDSDAEKDVLRNATLRWPSVQFKVINT 186 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + ++ A+ +L+ P D+I++ARGGG++EDL F++E +VRA+ + Sbjct: 187 AVQGMDAANQVIAALQKLDA------DPEIDVIVIARGGGALEDLLPFSNEDLVRAVFAA 240 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 S P++SAIGHE D + D ADLRA TPT AA+ VP + L RL+ I L Sbjct: 241 STPVVSAIGHEADRPILDDVADLRASTPTDAAKRIVPDLNEEFAGLEMARNRLDRSINNL 300 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ + L S+ + L N ++ L+R + L + R +H+ N++ Sbjct: 301 LQREAQLLASVRERPVLSNPQVMVTSRAEDLERWKQRSTDLLRHRVMRASDEISHLKNQM 360 Query: 358 KSDFLIHNIQK 368 ++ + + Sbjct: 361 RALSPQQTLDR 371 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 61/157 (38%), Gaps = 5/157 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E+ +E + R I + + +L +RE+ Sbjct: 261 ADLRASTPTDAAKRIVPDLNEEFAGLEMARNRLDRSINNLLQREAQLLASVRERPVLSNP 320 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + + +++ R +L H++ +S +++ + + TL RGY+ Q + Sbjct: 321 QVMVTSRAEDLERWKQRSTDLLRHRVMRASDEISHLKNQMRALSPQQTLDRGYSVTQLED 380 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 + + + K+++ I GQ A + P + Sbjct: 381 GSIVREAAQAPAKSKLFIRVASGQLVAQTLESIPAGQ 417 >gi|254774112|ref|ZP_05215628.1| exodeoxyribonuclease VII large subunit [Mycobacterium avium subsp. avium ATCC 25291] Length = 415 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 96/370 (25%), Positives = 165/370 (44%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + + V ++ + ++ L V V G+++ S + L+D + Sbjct: 5 ATSEPNSAENPFPVRAVAIRVASWIDR-LGTVWVEGQLAQVSLRPDSKTVFMVLRDPAAD 63 Query: 64 ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + + EG + +V GK + + G + + + + G G LL +E Sbjct: 64 MSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIE 123 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF + K PIPF+P +I +IT A RD+ + R+P +R + Sbjct: 124 RLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVKTVAAGRWPAVRFAVRNTA 183 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I A L+E P D+I+LARGGGS+EDL F+DE + RAIA Sbjct: 184 VQGPNAVAQIVEA------LRELDRDPEVDVIVLARGGGSVEDLLPFSDETLCRAIAACR 237 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P+ISA+GHE D L D AD+RA TPT AA+ VP Q + +L R + + Sbjct: 238 TPVISAVGHEPDNPLCDLVADVRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWV 297 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L + L + L+ + R + ++ + + H+ R+ Sbjct: 298 SREQRALAQIRSRPVLAEPLRALTARAEEVHRARSAIRRDVTRLTAAETERIGHLRARLA 357 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 358 TLGPAATLAR 367 Score = 77.1 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 6/133 (4%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R +++ + + R + + + + + + + + Sbjct: 277 AEQRLIDDLRRRSAQALRNWVSREQRALAQIR---SRPVLAEPLRALTARAEEVHRARSA 333 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNN-NFITQKRNLATKT 483 I ++ + + L + TL RGY +Q + + + T Sbjct: 334 IRRDVTRLTAAETERIGHLRARLATLGPAATLARGYAVVQTVGAGGPHVLRTVGDAPAGT 393 Query: 484 RILINFFDGQANA 496 R+ + DG A Sbjct: 394 RLRVRVADGAVAA 406 >gi|139437242|ref|ZP_01771402.1| Hypothetical protein COLAER_00381 [Collinsella aerofaciens ATCC 25986] gi|133776889|gb|EBA40709.1| Hypothetical protein COLAER_00381 [Collinsella aerofaciens ATCC 25986] Length = 389 Score = 225 bits (573), Expect = 2e-56, Method: Composition-based stats. Identities = 89/420 (21%), Positives = 155/420 (36%), Gaps = 32/420 (7%) Query: 84 IEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPF 143 ++ G + + + + S +G G L + + +KL EGL + K IP Sbjct: 1 MQVSFKGSFNLYKATGRMSFVARSFSLAGEGLLRQQVAQLAEKLRREGLMDEARKRRIPV 60 Query: 144 IPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKE 202 +AV+TS +GAVI D+ + + R P + ++ KVQG+ P E+ + + + Sbjct: 61 FCSRVAVVTSLSGAVIDDVKRTLRRRNPLVELVCVGAKVQGEGAPAELIEGLHRAAAIT- 119 Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 P PD I+L RGGGS EDL FNDE + RA+A +P+++ IGHE D ++ D +D Sbjct: 120 ----PAPDCILLVRGGGSFEDLMTFNDEELARAVAACPVPVVTGIGHEPDTSICDMVSDR 175 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 RA TPT AAE P L L RL + + + Sbjct: 176 RASTPTAAAESVAPAMTELADVLETRHQRLGAAMASM---------------------IG 214 Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 + L+ L + + R + R + +++ + + Sbjct: 215 SDQVDLEMLDQRGRRAWDTYTARLGDALDAAACRPCLNDPTFMVERRESELALTADRLSG 274 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + + L + + + + +R+E + + + Sbjct: 275 AIT----RSVGAFRSNFERLPERLVASTSGLDGKRHALTLASSRLEHQGRTMLSKPASDL 330 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 L + + L RGY+ + T + I + DG A V Sbjct: 331 GRAAASLDALSPLKVLARGYSIAYSDDG-VATSAKTFKPGDAIRVRMADGNVAATVDTVE 389 >gi|303228812|ref|ZP_07315626.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica ACS-134-V-Col7a] gi|302516524|gb|EFL58452.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica ACS-134-V-Col7a] Length = 407 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 120/380 (31%), Positives = 177/380 (46%), Gaps = 14/380 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 S+++L+ +K ++ L +V V G I+ + HSSGH YFSLKD S ID +W Sbjct: 3 VLSITQLNNLIKRTIDREYLLKNVYVSGTITNAK-RHSSGHVYFSLKDEESSIDVTMWSS 61 Query: 72 TLNK--IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ + + + + +I + L + +++L Sbjct: 62 TVQSKGLANAFQNGLLVTIKASVNFYNKMGRLNLIASDMQVGSKSPLQLEFDALQRELSA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 G F D HK PIP + I ++TS TGAV+ DIL R PL + +F V VQG Sbjct: 122 LGYFDDAHKQPIPVLSSCIGIVTSSTGAVLHDILHISEHRNPLMQFKLFSVPVQGTTAGP 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I P D+II+ RGGGS+EDLW FND +++ AI N+S PIISA+G Sbjct: 182 IIAKGIEA------ADKDPDVDVIIVGRGGGSMEDLWCFNDRVVIEAIYNASTPIISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-L 307 HETD+TLADYAAD+R TP+ AAE+AV LQ L L ++ + ++ K Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQHLQQKLDYLQYVMDQTLQQKRIELS 295 Query: 308 NSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L L +L+ + + I + IH + Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355 Query: 367 QKNRQHILEKQQHIEQIVKQ 386 K I ++ I I Sbjct: 356 VKGYSKIEKEGHTISSIQNM 375 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 59/167 (35%), Gaps = 6/167 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ H + + QQH++Q + + ++K L Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQHLQQKLDYLQYVMDQTLQQKRIELS 295 Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + ++ ++ +++ + S + + +S+ T+ L + + Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 +GY+ I+ + I+ +N+A I DG A+V P Sbjct: 356 VKGYSKIE-KEGHTISSIQNMAKGDVFKITLRDGSIKAVVEEVLPDG 401 >gi|300781584|ref|ZP_07091438.1| exodeoxyribonuclease VII large subunit [Corynebacterium genitalium ATCC 33030] gi|300533291|gb|EFK54352.1| exodeoxyribonuclease VII large subunit [Corynebacterium genitalium ATCC 33030] Length = 418 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 97/373 (26%), Positives = 178/373 (47%), Gaps = 12/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M S +SVS+++ +K +E L + + G+++ S +Y +L+D Sbjct: 3 MAGAQPPKSTPERPWSVSQVNDSVKQWIER-LGWLWIEGQLTQINVKPSWRFSYLTLRDT 61 Query: 61 HSRIDAIIWKGT--LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + + T + ++ +G +V+GK + G + + + + G G LL Sbjct: 62 QKEMSIQLTADTKMVRSLDAPLNDGDRVIVLGKPAFYAGRGSFSLWVTEIRHVGEGELLA 121 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ +K L EGLF K P+PF+P+ I +IT A RD+L R+P + + Sbjct: 122 KIEQLRKTLAAEGLFDPARKKPLPFLPRRIGLITGRGSAAERDVLSVAKDRWPAVDFRVI 181 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG ++ A+ L D+II+ARGGGS+EDL F++E + RA+A Sbjct: 182 NTPVQGAGTVPQVVEALRTL------DDDETVDVIIIARGGGSVEDLLPFSEEALQRAVA 235 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 +S P++SAIGHE D + D ADLRA TPT AA+ VP + L + +RL++ + Sbjct: 236 EASTPVVSAIGHEPDNPVLDNVADLRAATPTDAAKRVVPDVVAERQMLDDARSRLSSALR 295 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 ++ + + L+ + + N ++ R LDR + ++ ++ ++ + Sbjct: 296 SWVRRERHGLSQVRSRPAMANPLTQVTLRREELDRATAAIRRDITRLLKQETAEVKALRA 355 Query: 356 RIKSDFLIHNIQK 368 ++ + + + Sbjct: 356 QVSALGPAATLAR 368 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 7/142 (4%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ + + + + ++ +R + + M ++ + + I Sbjct: 279 ERQMLDDARSRLSSALRSWVRRERHGLSQVRSRPAM--ANPLTQVTLRREELDRATAAIR 336 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT--NN---NFITQKRNLATKT 483 ++ +K V + + TL RGY +Q + +T + Sbjct: 337 RDITRLLKQETAEVKALRAQVSALGPAATLARGYAVVQVQPRDGSEPEVVTSIAQAPPGS 396 Query: 484 RILINFFDGQANAIVINKAPPK 505 ++ I DG A + P + Sbjct: 397 QLRIRVGDGSITAASMAATPAE 418 >gi|218437275|ref|YP_002375604.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. PCC 7424] gi|218170003|gb|ACK68736.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 7424] Length = 384 Score = 225 bits (572), Expect = 2e-56, Method: Composition-based stats. Identities = 105/393 (26%), Positives = 179/393 (45%), Gaps = 32/393 (8%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRI 64 + SVS L+ +++ ++E + L V V GE+S +F+L D + + Sbjct: 4 TFSETALSVSGLTTYIQDLLEGDEQLQQVWVTGEVSSLNDHPRG--LFFTLSDPQVEAAV 61 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 + ++W ++ P+ G + LV+G I + Y++ + ++ G G ++ + Sbjct: 62 NCVVWNSQRLRLVEEPKVGAQILVLGSIRLYAKRGDYRLTVFQVLAVGEGLQALRYQQLR 121 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 +L EGLF + K +P P+ IAV+TSPT A DI + +S R+P L ++ P VQG Sbjct: 122 SRLQAEGLFDHERKRLLPLHPQTIAVVTSPTAAAWGDIQRTLSQRYPGLHLLFSPATVQG 181 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +E P I A+ ++N R +++ILARGGGS+EDL FNDE +VRAIA S IP+ Sbjct: 182 EEAPPSIVRAMERVNR------DGRAEVMILARGGGSVEDLSCFNDERVVRAIALSQIPV 235 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I+ IGH+ D +LAD AD+ TPT AAE VP L + R+I Sbjct: 236 ITGIGHQRDESLADLVADVSVHTPTAAAERVVPD-------YNQLVIDHQQRVNRIIDSV 288 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L+ + + + ++ + Sbjct: 289 RERLQQESNYLDQLHSRLTQL------------PTTSRYLAQMTAKCQLLKQKLIALDPQ 336 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 +++ + ++ + I + + + L + Sbjct: 337 EVLKRGYAVVRKRDEKIIRTTDELVPEQELTIQ 369 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 15/106 (14%), Positives = 38/106 (35%), Gaps = 2/106 (1%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYK 455 ++ + + + R+ ++ +L +R+ + S + + + L + + Sbjct: 277 HQQRVNRIIDSVRERLQQESNYLDQLHSRLTQLPTTSRYLAQMTAKCQLLKQKLIALDPQ 336 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 LKRGY ++ + I L + + I G V + Sbjct: 337 EVLKRGYAVVRKRDEKIIRTTDELVPEQELTIQLGQGFFKVKVTDI 382 >gi|307152784|ref|YP_003888168.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. PCC 7822] gi|306983012|gb|ADN14893.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 7822] Length = 384 Score = 224 bits (571), Expect = 3e-56, Method: Composition-based stats. Identities = 109/333 (32%), Positives = 174/333 (52%), Gaps = 16/333 (4%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRI 64 + SVS L+ +++ ++E + L V V GE+S +F+L D + I Sbjct: 4 TFSETALSVSGLTTYIQDLLEGDEQLQQVWVTGEVSSLHDHPKG--LFFTLSDPQVDAAI 61 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 ++W ++ P+ G + LV+G I + +Y++ + ++ G G ++ + Sbjct: 62 SCVVWNSQRLRLVTEPKAGEQLLVLGSIRIYAKRGEYRLTVFQVLAVGEGLQALRYQQLR 121 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 +L EGLF Q K P+P P+ IAV+TSPT A DI + +S R+P L +++ P VQG Sbjct: 122 SRLQAEGLFDAQRKRPLPLHPQTIAVVTSPTAAAWGDIQRTLSQRYPGLHLLLSPATVQG 181 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +E P I A+ ++N R +IILARGGGS+EDL FNDE +VRAIA S IP+ Sbjct: 182 EEAPMSIVAAMERVNR------DGRAQVIILARGGGSVEDLSCFNDERVVRAIALSQIPV 235 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I+ IGH+ D +LAD AD+ TPT AAE VP L R+ + ++ + Sbjct: 236 ITGIGHQRDESLADLVADVSVHTPTAAAERVVPDYHQLVLEHRERVNRVVEAVKERLQGE 295 Query: 304 I---NTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + L + L LP++ ++L+ + L + Sbjct: 296 LTYVEQLRTRLTLLPSTSRSLAQVTAKCQLLQQ 328 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 49/123 (39%), Gaps = 6/123 (4%) Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSC 438 E++V + + + ++ ++ + E K R+ T++++L TR+ S + Sbjct: 264 ERVVPDYHQLVLEHRER----VNRVVEAVKERLQGELTYVEQLRTRLTLLPSTSRSLAQV 319 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 + + L + + LKRGY ++ T+ + L + + I G V Sbjct: 320 TAKCQLLQQKLIALDPQAVLKRGYAVVRKTDAQIVRSTDELHPEQELTIQLGQGFFKVKV 379 Query: 499 INK 501 + Sbjct: 380 TDI 382 >gi|254410940|ref|ZP_05024718.1| exodeoxyribonuclease VII, large subunit [Microcoleus chthonoplastes PCC 7420] gi|196182295|gb|EDX77281.1| exodeoxyribonuclease VII, large subunit [Microcoleus chthonoplastes PCC 7420] Length = 420 Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats. Identities = 120/387 (31%), Positives = 203/387 (52%), Gaps = 16/387 (4%) Query: 4 FSQKNSL-DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD- 59 + NSL SV+ L+ +++ ++E + L V V GE+S H SG +F+L+D Sbjct: 13 MTNTNSLLPEATLSVAGLTDYIQELLEQDTQLQKVWVIGEVSSAN-RHRSG-MFFTLRDL 70 Query: 60 -NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + I ++W L+K+ LP+ G + + +G I +P +YQ+++ +P G G Sbjct: 71 EGKASIQCVVWNSVLSKLVQLPQSGEQLIALGSIRIYPQRGQYQLMVWQALPGGEGLQAL 130 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 + +++L EGLF Q+K P+P P+ IAV+TSP A DI + + R+P L V+ Sbjct: 131 RYNQLRQRLAAEGLFDAQNKRPLPTHPQTIAVVTSPQAAAWGDIRRTLRQRYPGLSVLFS 190 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P +VQGD P+ I AI ++ R +++IL+RGGG+ EDL F+DE +VRAIA Sbjct: 191 PAQVQGDLAPESIVTAIERVER------DGRAELVILSRGGGASEDLVGFDDERVVRAIA 244 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 N SIP+++ IGH+ D +LAD AD A TPT AAE AVP L + + L+ + Sbjct: 245 NCSIPVLTGIGHQRDESLADLVADFCAHTPTAAAERAVPELATLITEHQQRQEALHEAVT 304 Query: 298 RLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + N L+ L L ++ L + + + + L H+ I + +H + Sbjct: 305 QHLDTSRNQLHQLKNRLQRLPLNRQLQQEHHAIAQQRQRLIHSTSWRISQATQHCQFLGQ 364 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQ 382 ++ + + +++ + +Q I + Sbjct: 365 KLATLDPTNVLKRGYAVVRTEQGKIAR 391 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 5/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHIL----EKQQHIEQIVKQHLRYIFLEKKEKI 399 ++ ++ + ++ + E QQ E + + +++ + + Sbjct: 256 HQRDESLADLVADFCAHTPTAAAERAVPELATLITEHQQRQEALHEAVTQHLDTSRNQLH 315 Query: 400 AILHMLREQTKNR-IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + L+ NR + H I + R+ S +I + L + N L Sbjct: 316 QLKNRLQRLPLNRQLQQEHHAIAQQRQRLIHSTSWRISQATQHCQFLGQKLATLDPTNVL 375 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 KRGY ++ +L + I +GQ N V Sbjct: 376 KRGYAVVRTEQGKIARNATSLVPGEELQIQLAEGQINVQVTEI 418 >gi|189461896|ref|ZP_03010681.1| hypothetical protein BACCOP_02562 [Bacteroides coprocola DSM 17136] gi|189431290|gb|EDV00275.1| hypothetical protein BACCOP_02562 [Bacteroides coprocola DSM 17136] Length = 432 Score = 224 bits (570), Expect = 4e-56, Method: Composition-based stats. Identities = 106/510 (20%), Positives = 201/510 (39%), Gaps = 98/510 (19%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61 ++H S+ EL+ ++ + + L V+ E+S R + SGH Y F KD Sbjct: 1 MEHSSLSLQELNSLVRKSIRTCLPDTYWVQAELSDVRANY-SGHCYLEFVQKDAKSNALI 59 Query: 62 SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ IIW +++ F E G + LV + Y + + + P+ Sbjct: 60 AKARGIIWSNVYYQLKAYFERETGQAFVSGIKVLVKVSVDFHELYG-YSLTVTDIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G + ++ K+L EEG+ + + +P + + IAVI+S T A D ++ Sbjct: 119 LGDMALRRKEILKRLDEEGVLTLNKELELPELTQRIAVISSATAAGYGDFCNQLENNAFG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QG+ I +A+ ++N C R D++++ RGGG+ DL F+ Sbjct: 179 FAFHSRLFPAVMQGEAVESSIISALERINA-----ECDRWDVVVIIRGGGATSDLSGFDT 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + A +P+I+ IGHE D T+ D + R TPT AAE + Sbjct: 234 YELATHCAQFPLPVITGIGHERDDTVLDMVSHTRVKTPTAAAEFLI-------------- 279 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 L + RL+R + + L ++ RK Sbjct: 280 -----------------------------NHLRQTAERLERYTQFIYQELPVLFTRKKEQ 310 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 F H ++RI +Q QH +Q+ + + ++ + FL+++ ++ Sbjct: 311 FEHWVSRIPV-----RVQMRLQHEHFRQERLTKQIQMGWQTRFLKEEHRLQ--------- 356 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + RI L ++ +++ + +++ + + LK+GY+ N Sbjct: 357 -------------IDRRIATALEVILQREKHRLALIEQQVKASSPELLLKKGYSITL-KN 402 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499 +T L ++ G+ + VI Sbjct: 403 GRAVTDATQLLPGDEVVTKVAKGEFKSKVI 432 >gi|213965463|ref|ZP_03393658.1| exodeoxyribonuclease VII, large subunit [Corynebacterium amycolatum SK46] gi|213951847|gb|EEB63234.1| exodeoxyribonuclease VII, large subunit [Corynebacterium amycolatum SK46] Length = 411 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 14/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62 S+ + V L+ +K +E L + V GEI+ S +Y +L+D + Sbjct: 1 MSKLETSAEKPVQVRRLNQLVKDYIER-LGQIWVEGEIAQVNSKPSWKLSYITLRDTSAE 59 Query: 63 -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + T G +V+GK + G ++ + P G G LL LE Sbjct: 60 FSVSVTC--STAALRNNPLRNGDRVVVLGKPAFYAGRGQFSLWATEWRPVGLGQLLARLE 117 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF + K P+P++P I +IT A RD+L R+P + + Sbjct: 118 QLRQALAAEGLFDPRLKRPLPYLPNKIGLITGRGSAAERDVLSVAGARWPEVDFRVINTI 177 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + EI A+ QL+ P D+II+ARGGGS+EDL F+DE ++RA++ ++ Sbjct: 178 VQGAKAVPEIIEALAQLDA------DPEVDVIIVARGGGSVEDLLPFSDEALIRAVSKAT 231 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L DY ADLRA TPT AA+ VP + + L R + + R + Sbjct: 232 TPMVSAIGHEPDTPLLDYVADLRAATPTDAAKKTVPDAAEERRLIAQLRERSSASLRRWV 291 Query: 301 KYK--INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L + + + L + + R+ + + ++ Sbjct: 292 DREVATLRDLTSRPVLRDPLTPIRVREEFVTAQVDRLRFLIHRSLEREEAVVSGLRGKVS 351 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 352 ALGPSATLAR 361 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 55/162 (33%), Gaps = 10/162 (6%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----RE 407 + +++ +K E+++ I Q+ ++ + ++A L L Sbjct: 249 YVADLRAATPTDAAKKTVPDAAEERRLIAQLRERSSASLRRWVDREVATLRDLTSRPVLR 308 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 I + + R+ F++ ++ VS + + TL RGY +Q Sbjct: 309 DPLTPIRVREEFVTAQVDRLRFLIHRSLEREEAVVSGLRGKVSALGPSATLARGYAIVQA 368 Query: 468 T-----NNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 +T + +++ I DG +A + P Sbjct: 369 QSATQPEPQIVTSIADAPMGSQLRIRVSDGSISAATLATKPA 410 >gi|303232060|ref|ZP_07318763.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica ACS-049-V-Sch6] gi|302513166|gb|EFL55205.1| exodeoxyribonuclease VII, large subunit [Veillonella atypica ACS-049-V-Sch6] Length = 407 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 120/380 (31%), Positives = 177/380 (46%), Gaps = 14/380 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 S+++L+ +K ++ L +V V G I+ + HSSGH YFSLKD S ID +W Sbjct: 3 VLSITQLNNLIKRTIDREYLLKNVYVSGTITNAK-RHSSGHVYFSLKDEESSIDVTMWSS 61 Query: 72 TLNK--IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ + + + + +I + L + +++L Sbjct: 62 TVQSKGLANAFQNGLLVTIKASVNFYNKMGRLNLIASDMQVGSKSPLQLEFDALQRELSA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPK 188 G F D HK PIP + I ++TS TGAV+ DIL R PL + +F V VQG Sbjct: 122 LGYFDDAHKQPIPVLSSCIGIVTSSTGAVLHDILHISEHRNPLMQFKLFSVPVQGTTAGP 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I P D+II+ RGGGS+EDLW FND +++ AI N+S PIISA+G Sbjct: 182 IIAKGIEA------ADKDPDVDVIIVGRGGGSMEDLWCFNDRVVIEAIYNASTPIISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-L 307 HETD+TLADYAAD+R TP+ AAE+AV LQ L L ++ + ++ K Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQDLQQKLDYLQYVMDQTLQQKRIELS 295 Query: 308 NSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L L +L+ + + I + IH + Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355 Query: 367 QKNRQHILEKQQHIEQIVKQ 386 K I ++ I I Sbjct: 356 VKGYSKIEKEGHTISSIQNM 375 Score = 77.1 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 57/163 (34%), Gaps = 6/163 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ H + + QQ ++Q + + ++K L Sbjct: 236 HETDYTLADYAADMRGATPSHAAEIAVLPLTTLQQDLQQKLDYLQYVMDQTLQQKRIELS 295 Query: 404 MLREQ-----TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + ++ ++ +++ + S + + +S+ T+ L + + Sbjct: 296 TIFNRRLGFPALQLLHKQNSLLQSYKEKLQTLASQRWQHEKHKLSLITQELSLQNPIHLM 355 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 +GY+ I+ + I+ +N+A I DG A+V Sbjct: 356 VKGYSKIE-KEGHTISSIQNMAKGDVFKITLRDGSIKAVVEEV 397 >gi|186683190|ref|YP_001866386.1| exodeoxyribonuclease VII large subunit [Nostoc punctiforme PCC 73102] gi|186465642|gb|ACC81443.1| exodeoxyribonuclease VII, large subunit [Nostoc punctiforme PCC 73102] Length = 426 Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats. Identities = 114/362 (31%), Positives = 190/362 (52%), Gaps = 17/362 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70 SVS L+ +++ ++E + L V V GE+S H SG +F+L+D + I ++W Sbjct: 29 LSVSGLTDYIRLLLEQDEQLRQVWVTGEVSSANH-HRSG-LFFTLQDTDRTAGIKCVVWN 86 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 L K+ +P G + +++G I +P +YQ+ + +P+G G ++ K +LL E Sbjct: 87 SQLPKLAQMPVAGEQIIILGSIRLYPQRGEYQLSVWQTLPAGVGLQALRYQQLKNRLLAE 146 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF Q K +P P+ IAV+TSPT A DI + + R+P L V+ P VQG++ P+ Sbjct: 147 GLFDAQRKRSLPIHPQTIAVVTSPTAAAWGDIQKTLKQRYPGLHVLFSPATVQGEQAPES 206 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++ R +++IL+RGGG++E+L FNDE +VR++A+ SIP+I+ IGH Sbjct: 207 IVKAIERVER------DGRAEVLILSRGGGAVEELACFNDERVVRSLASCSIPVITGIGH 260 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D +LAD AD+ TPT AAEM VP L + L+ + + N L Sbjct: 261 QRDESLADLVADVCVHTPTAAAEMVVPSLSELYTEHRQRVVALHEAVHDSGENAENKLQV 320 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY---RHFNHIINRIKSDFLIHNI 366 L L +++L + +H ++I + R +H + ++ + + Sbjct: 321 LRNRLRRLRLDRQVQ-QEVEKLAWKRQHLVQITMGRSQQAAQHLELLRQKLATLDPKAVL 379 Query: 367 QK 368 Q+ Sbjct: 380 QR 381 Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 55/172 (31%), Gaps = 6/172 (3%) Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + + + +L ++ H + L ++RQ ++ + H Sbjct: 258 IGHQRDESLADLVADVCVHTPTAAAEMVVPSLSELYTEHRQRVVALHE------AVHDSG 311 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 E K ++ + R + ++ + + I + + + + + L Sbjct: 312 ENAENKLQVLRNRLRRLRLDRQVQQEVEKLAWKRQHLVQITMGRSQQAAQHLELLRQKLA 371 Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + K L+RGY ++ + LA +LI G+ VI Sbjct: 372 TLDPKAVLQRGYAVVRREDGAIARSAAELAVGEDLLIQLGQGRVKVKVIEVN 423 >gi|313894511|ref|ZP_07828075.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313440907|gb|EFR59335.1| exodeoxyribonuclease VII, large subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 407 Score = 223 bits (569), Expect = 5e-56, Method: Composition-based stats. Identities = 111/362 (30%), Positives = 172/362 (47%), Gaps = 14/362 (3%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++++L+ +K ++ L +V V G I + HSSGH YFSLKD S ID +W Sbjct: 3 VLTITQLNNLIKRTLDREYLLKNVYVSGTIINAK-RHSSGHMYFSLKDEESAIDVTMWSS 61 Query: 72 TL--NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 T+ + + G+ V + + + +I + L + K++L Sbjct: 62 TVMQKGLANAIQNGLLVTVKASVNFYNKMGRLNLIASDMQIGSKSPLQLEFDALKRELTA 121 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 G F D HK +P++ I ++TS +GAV+ DIL R P ++ +F V VQG+ Sbjct: 122 LGYFDDGHKQSLPYMASCIGIVTSQSGAVLHDILHVSERRNPLVQFKLFSVPVQGNTAGL 181 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IA I + + +II+ RGGGS+EDLW FND +V AI ++ P+ISA+G Sbjct: 182 IIAKGIAAADADPDVD------LIIVGRGGGSMEDLWCFNDRAVVEAIYTANTPVISAVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HETD+TL DY AD R TP+ AAEMAV LQ L E L+ I ++ K L Sbjct: 236 HETDYTLCDYVADARGATPSHAAEMAVLPLTTLQDQLTEKEEYLHEYIRYTLQQKRTDLT 295 Query: 309 -SLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + L Q L + L L + L + + + + +++S + + Sbjct: 296 LLFNRRLGIPALQFLHKQKSHLQELTQTLTNITKERCNTEKHSLALLAQQLESLNPLQMM 355 Query: 367 QK 368 K Sbjct: 356 VK 357 Score = 90.6 bits (223), Expect = 5e-16, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 6/155 (3%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFY 415 H + + Q + + + YI ++K L +L + + Sbjct: 253 TPSHAAEMAVLPLTTLQDQLTEKEEYLHEYIRYTLQQKRTDLTLLFNRRLGIPALQFLHK 312 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 +H+++L + I + + S+++ + L+S + +G+ ++ NN IT Sbjct: 313 QKSHLQELTQTLTNITKERCNTEKHSLALLAQQLESLNPLQMMVKGFAKVEH-NNEPITS 371 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 L I + DG A V K Sbjct: 372 VSQLQANDDIRVTLADGYVTATVKEAHKDGRITKK 406 >gi|315443128|ref|YP_004076007.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. Spyr1] gi|315261431|gb|ADT98172.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. Spyr1] Length = 415 Score = 223 bits (568), Expect = 6e-56, Method: Composition-based stats. Identities = 97/378 (25%), Positives = 172/378 (45%), Gaps = 19/378 (5%) Query: 1 MNP-----FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYF 55 M P +++ + + V ++ + ++ L V V G+I+ +S A+ Sbjct: 1 MTPEGADGAPGQSADN--PFPVRGVAIRVAGWIDR-LGAVWVEGQIAQLTLRPNSNTAFI 57 Query: 56 SLKDNHS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 +L+D + + +G + +G + +V GK + + G + + + + G Sbjct: 58 TLRDPAADMSLSLTCPRGLVVNAPVKMSDGTQVIVYGKPSFYTGRGTFSLRVSEIRAVGI 117 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-L 172 G LL +E+ ++ L EGLF + K PIPF+P I +IT A DI+ S R+P + Sbjct: 118 GELLARIERLRRLLDAEGLFDPRLKRPIPFLPDTIGLITGRASAAEHDIMAVASGRWPAV 177 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 R + VQG +I +A+ L+ D+I+LARGGGS+EDL F+DE + Sbjct: 178 RFAVRHTVVQGPNAVPQIVDALRALDA------DRDVDVIVLARGGGSVEDLLPFSDETL 231 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 R IA + P++SAIGHE D L D ADLRA TPT AA+ VP Q+ + L R Sbjct: 232 CREIARCTTPVVSAIGHEPDNPLCDLVADLRAATPTDAAKRIVPDTAAEQALITELRRRS 291 Query: 293 NNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 + + + + ++ L + + + R + ++ ++ + Sbjct: 292 ARALRNWVNREAHVVSQLRSRPVMSRPLAAIDARTDEIGRARTAVRRDIARLLRVESDRV 351 Query: 351 NHIINRIKSDFLIHNIQK 368 H+ R+ + + + Sbjct: 352 GHLSARLTTLGPAATLAR 369 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 52/159 (32%), Gaps = 9/159 (5%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ ++ +Q I ++ ++ R + + ++ LR + Sbjct: 257 LVADLRAATPTDAAKRIVPDTAAEQALITELRRRSARALRNWVNREAHVVSQLRSRPVMS 316 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 I I + T + ++ ++ V + L + TL RGY +Q Sbjct: 317 RPLAAIDARTDEIGRARTAVRRDIARLLRVESDRVGHLSARLTTLGPAATLARGYAVVQT 376 Query: 468 ----TNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + + + TR+ + DG A Sbjct: 377 VPDAGDPRILGSVADAPAGTRLRVRVADGAITATSEGGQ 415 >gi|229006510|ref|ZP_04164155.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock1-4] gi|228754744|gb|EEM04144.1| Exodeoxyribonuclease 7 large subunit [Bacillus mycoides Rock1-4] Length = 353 Score = 223 bits (568), Expect = 6e-56, Method: Composition-based stats. Identities = 119/398 (29%), Positives = 180/398 (45%), Gaps = 56/398 (14%) Query: 108 LIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167 + P G G L A E+ K +L EEGLFS +K PIP K I VITSPTGA IRDI+ I Sbjct: 1 MQPDGIGNLHLAYEQLKVRLEEEGLFSQVYKQPIPAYAKTIGVITSPTGAAIRDIIATIK 60 Query: 168 CRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226 R+P+ VI+FPV VQG+ I AI N +K+ D +I+ RGGGSIE+LW Sbjct: 61 RRYPIGNVIVFPVLVQGESAAPSIVQAIQTANEMKD------IDALIVGRGGGSIEELWA 114 Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 FN+EM+ RAI S IPIISA+GHETD+T+AD+ ADLRAPTPT AAE+A P LQ ++ Sbjct: 115 FNEEMVARAIFASEIPIISAVGHETDFTIADFVADLRAPTPTAAAELAAPNIIELQEKVL 174 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 RL + ++ K L +L K+ Q +LDR +L E + Sbjct: 175 QRTLRLQRTMREMLHKKQEQLQTLQKSYAFRYPKQVYEQKEEQLDRTLEQLILVKERYVE 234 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 +K + ++ I + + + Q+ +++ ++ Sbjct: 235 KKVNQLKQLSFYLEKHHPSQKIVQTKTRVETLQKQLQREMQ------------------- 275 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 +++ + + L++ + + RGY Sbjct: 276 ----------------------------TLLQTKEFAFMRAAQKLEALSPLKVMMRGYGL 307 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + + +++ + + DG + V Sbjct: 308 VYSEKKQVLKSVKDVDLGDVVSVQLQDGVLDCNVSGIE 345 >gi|288920876|ref|ZP_06415172.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EUN1f] gi|288347708|gb|EFC81989.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EUN1f] Length = 452 Score = 223 bits (568), Expect = 6e-56, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65 S V +S + + S L V V G+++ G + +L+D+ + + Sbjct: 4 TSTPDEPLPVRTISRAMGDWI-SRLGRVWVEGQVTEISRRPGMGTVFMTLRDSAADVSLR 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + + +G +V GK + G + + + P G+G LL LE+ K Sbjct: 63 VTCPRAVCEAVGPGLVDGARVVVWGKPSFHAGRGTLALAVTEIRPLGAGALLARLERLKA 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K PF+P ++ +IT A RD+++ R+P +R+ + V VQG Sbjct: 123 TLAAEGLFAASRKKRPPFLPGVVGLITGRASAAERDVVENARRRWPAVRIELREVAVQGP 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +I +A L E ++I++ARGGGS+EDL F+DE ++RA+ + P++ Sbjct: 183 LAVGQIIDA------LAELDADGAVEVIVIARGGGSLEDLLPFSDEALLRAVVAARTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ AD+RA TPT AA+ VP + + L R ++ + + Sbjct: 237 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVAEQSAGVEALRGRARRVLTHRLDLEA 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L L + + ++ L + + R H R+++ Sbjct: 297 RRLADLRGRPVLAAPLREIEHREQAVETLRSRSRRCVLHAVEVAGRDLAHAAARMRALSP 356 Query: 363 IHNIQK 368 + + Sbjct: 357 AATLDR 362 Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats. Identities = 13/116 (11%), Positives = 36/116 (31%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 R ++ + I + ++ L +R + H ++ Sbjct: 281 RGRARRVLTHRLDLEARRLADLRGRPVLAAPLREIEHREQAVETLRSRSRRCVLHAVEVA 340 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 ++ +++ + TL RGY +Q + + + R+++ G Sbjct: 341 GRDLAHAAARMRALSPAATLDRGYALVQRADGLVVRSPAEVTRGERLVVRVAGGTF 396 >gi|117929082|ref|YP_873633.1| exodeoxyribonuclease VII large subunit [Acidothermus cellulolyticus 11B] gi|158512369|sp|A0LW37|EX7L_ACIC1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|117649545|gb|ABK53647.1| Exodeoxyribonuclease VII large subunit [Acidothermus cellulolyticus 11B] Length = 416 Score = 223 bits (568), Expect = 6e-56, Method: Composition-based stats. Identities = 110/384 (28%), Positives = 183/384 (47%), Gaps = 13/384 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + +S + P V E++ + V L + V G+++ + + +F+L+D + Sbjct: 1 MALTSSAESPV-PVREVARQIGLWV-GRLGRIWVDGQLTQIKIRPGTNTVFFNLRDPSAN 58 Query: 64 ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + A + IE P EG+ V+GK + Q+++ + P G G LL LE Sbjct: 59 VTLLATCPRQVFECIEPKPTEGLRVAVLGKPEFYVPRGSLQLVVHDIRPIGIGDLLARLE 118 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + KK L EGLF+ + K P+PF+P+++ +I A RD+++ R+P +R I V Sbjct: 119 RLKKILAAEGLFAPERKRPLPFLPRVVGLICGRGSAAERDVVENARRRWPAVRFDIAAVA 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG EI A+ +L+ ARGGGS+EDL F+DE ++RA+A Sbjct: 179 VQGPYAVPEIVAALRRLDDDPVVDVIVI------ARGGGSVEDLLPFSDETLLRAVAACR 232 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHETD L D+ AD+ A TPT AA VP + L L RL N + I Sbjct: 233 TPVVSAIGHETDTPLLDFVADVAASTPTDAARRIVPDVAEQYAQLAQLGDRLRNALRHRI 292 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L++L L + Q ++ + RL R L+ I H++ R++ Sbjct: 293 DREQQVLDTLRSRPVLAHPVQDINRRGEEILRLVRAGRTALDTAIRAADADARHLVARLR 352 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQ 382 + +++ +L+ + + Sbjct: 353 ALAPAATLERGYAIVLDPAGRVIR 376 Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 44/140 (31%), Gaps = 2/140 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + + + + R ++ + I I +L+ Sbjct: 270 VAEQYAQLAQLGDRLRNAL--RHRIDREQQVLDTLRSRPVLAHPVQDINRRGEEILRLVR 327 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 L I++ L++ A TL+RGY + D I + T + Sbjct: 328 AGRTALDTAIRAADADARHLVARLRALAPAATLERGYAIVLDPAGRVIRGADEVQTGDEL 387 Query: 486 LINFFDGQANAIVINKAPPK 505 ++ G+ V + AP + Sbjct: 388 VVRLGRGRLRVTVTDVAPAE 407 >gi|91215731|ref|ZP_01252701.1| exodeoxyribonuclease VII large subunit [Psychroflexus torquis ATCC 700755] gi|91186197|gb|EAS72570.1| exodeoxyribonuclease VII large subunit [Psychroflexus torquis ATCC 700755] Length = 466 Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats. Identities = 102/514 (19%), Positives = 195/514 (37%), Gaps = 72/514 (14%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH---- 61 NS +++ ++ L+ ++ ++ ++ EI+ SGH Y L + Sbjct: 2 SNSTATSVFTLLDIGKSLQRMISTHYHKPYWIKTEIAKLNAYTKSGHCYPDLVEKQNGQV 61 Query: 62 -SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 +++ AIIW T I E+ G+ +++ K+T + + + + I + S Sbjct: 62 LAQMRAIIWSDTFKTISKQFEDVTRKPLSEGMTVMILAKVT-YHPNYGFSLNIVDIDASF 120 Query: 113 -SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + + K+L EGLF P +PK IA+I+ T +D L IS Sbjct: 121 TLGEMAKEKLESLKRLKTEGLFDLNKTLTFPKVPKRIAIISVETSKGYQDFLNIISHNKY 180 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 F + +FP +QGD+ I+ A+ + T D++ + RGGG L ++ Sbjct: 181 GFKFELELFPALLQGDKAITSISEALELIKTRTSE-----FDVVTIIRGGGGDVGLSCYD 235 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 ++ +A +P+IS IGH T+ TL + TPT A + L L Sbjct: 236 SFILASKVARFPLPVISGIGHSTNETLVEMVTYTNKITPTDVAYFFIDRFMDCFEELNML 295 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + N ++ L ++ L L + + ++ ++ R Sbjct: 296 HSDFNRLVKYK---------------------LKEEQFELKALHLKFKSQVDTLLQRHDF 334 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 RIKS + ++ + + ++ + KQ + + + Sbjct: 335 MLKQQRQRIKSTLPSY-VRSRFDGLTQLSFQLKFMTKQGFQTENQQLRR----------- 382 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 L ++ S + + H +++ + L+ + + LKRGYT Sbjct: 383 --------------LSNTLKRETSDVLVNNHNTLNYLSSNLKLLSPEQILKRGYTLNL-V 427 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 N+ I +L T ++ F DG A + VI Sbjct: 428 NDKIIKSASDLKTGDQLKTMFADGYAESKVIKTK 461 >gi|134097535|ref|YP_001103196.1| putative exodeoxyribonuclease VII large subunit [Saccharopolyspora erythraea NRRL 2338] gi|291009729|ref|ZP_06567702.1| exodeoxyribonuclease VII, large subunit [Saccharopolyspora erythraea NRRL 2338] gi|133910158|emb|CAM00271.1| putative exodeoxyribonuclease VII large subunit [Saccharopolyspora erythraea NRRL 2338] Length = 391 Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats. Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 12/352 (3%) Query: 22 YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI--IWKGTLNKIEFL 79 + + + L + V G+I+ + A+ +L+D + + L +E Sbjct: 3 RKIADWI-NRLGSIWVEGQITQISARPGAATAFLTLRDPSADVSLTLTCSSALLRNMEPP 61 Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139 +G +V GK T F G + ++ + G G LL +E+ ++ L EGLF K Sbjct: 62 LTDGSRVVVHGKPTFFVGRGTLSLRVDEIRAVGIGELLARIERLRQLLKAEGLFDPARKR 121 Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLN 198 P+PF+P + +IT A D+L R+P +R I V VQG +I A Sbjct: 122 PLPFLPNKVGLITGRASAAEHDVLTNARLRWPAVRFEIRNVAVQGSTAVPQILEA----- 176 Query: 199 TLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADY 258 L E P D+I+LARGGGS+EDL F+DE + RA++ P++SAIGHE D L D+ Sbjct: 177 -LGELDRVPEVDVIVLARGGGSVEDLLPFSDEALCRAVSACRTPVVSAIGHEPDSPLLDH 235 Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPN 316 AD+R TPTGA + VP + L R + + + L++L L + Sbjct: 236 VADVRCSTPTGAGKRVVPDVAEETQRIHQLRDRARRALHGWVDRERRLLDALRSRPVLAD 295 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L ++ L + ++ + + +R+ + + + Sbjct: 296 PIGPLDRRSEQVSGLRDRARRAMTSVLTTEQHRVEGVRSRLTTLGPAATLAR 347 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 9/155 (5%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-- 412 ++ ++ + E+ Q I Q+ + R + + +L LR + Sbjct: 237 ADVRCSTPTGAGKRVVPDVAEETQRIHQLRDRARRALHGWVDRERRLLDALRSRPVLADP 296 Query: 413 ---IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 + + L R ++ + + V L + TL RGY +Q D Sbjct: 297 IGPLDRRSEQVSGLRDRARRAMTSVLTTEQHRVEGVRSRLTTLGPAATLARGYAIVQLVD 356 Query: 468 TNN--NFITQKRNLATKTRILINFFDGQANAIVIN 500 + + TR+ + DG A+V Sbjct: 357 PDGVDGVLRSVDEAGPGTRLRVRVVDGAVYAVVDE 391 >gi|120405585|ref|YP_955414.1| exodeoxyribonuclease VII large subunit [Mycobacterium vanbaalenii PYR-1] gi|119958403|gb|ABM15408.1| Exodeoxyribonuclease VII large subunit [Mycobacterium vanbaalenii PYR-1] Length = 410 Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats. Identities = 97/373 (26%), Positives = 169/373 (45%), Gaps = 14/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M + + + V ++ + ++ L V V G+I+ +S A+ +L+D Sbjct: 1 MTSAQGHSPEN--PFPVRGVAIRVAGWIDK-LGAVWVEGQIAQLTLRPNSSTAFITLRDP 57 Query: 61 HS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + + + + +G + +V GK + G + + + + G G LL Sbjct: 58 AADMSLSLTCPRDLVVNAPVKMTDGTQVIVYGKPNFYTGRGTFSLRVSEIRAVGIGELLA 117 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ ++ L EGLF + K PIPF+P I +IT A DI+ + R+P +R + Sbjct: 118 RIERLRRLLDTEGLFDPRLKRPIPFLPGTIGLITGRASAAEHDIVAVATGRWPAVRFAVR 177 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG +I +A L++ P D+I+LARGGGS+EDL F+DE + R IA Sbjct: 178 NTVVQGPNAVPQIVDA------LRDLDADPDVDVIVLARGGGSVEDLLPFSDETLCREIA 231 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + P++SAIGHE D L D ADLRA TPT AA+ VP Q+ + +L R + Sbjct: 232 ACTTPVVSAIGHEPDNPLCDLVADLRAATPTDAAKRIVPDTAAEQALVTDLRRRSARALR 291 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + +T+ L L + + R +++ ++ + H+ Sbjct: 292 NWVNREAHTVAQLRSRPVLARPLAAIDARAEEIHRARAAARRDVKRLLATEADRVGHLTA 351 Query: 356 RIKSDFLIHNIQK 368 R+ + + + Sbjct: 352 RLTTLGPAATLAR 364 Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 4/101 (3%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + I I + + + + V T L + TL R Sbjct: 305 RSRPVLARPLAAIDARAEEIHRARAAARRDVKRLLATEADRVGHLTARLTTLGPAATLAR 364 Query: 461 GYTSIQD--TNN--NFITQKRNLATKTRILINFFDGQANAI 497 GY +Q T+ + + + R+ I DG AI Sbjct: 365 GYAVVQTIATSGEPHVLHSVSDAPAGARLRIRVTDGAVTAI 405 >gi|226307723|ref|YP_002767683.1| exodeoxyribonuclease VII large subunit [Rhodococcus erythropolis PR4] gi|229493931|ref|ZP_04387703.1| exodeoxyribonuclease VII, large subunit [Rhodococcus erythropolis SK121] gi|226186840|dbj|BAH34944.1| putative exodeoxyribonuclease VII large subunit [Rhodococcus erythropolis PR4] gi|229319208|gb|EEN85057.1| exodeoxyribonuclease VII, large subunit [Rhodococcus erythropolis SK121] Length = 421 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 12/362 (3%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDAIIW 69 + V +S + ++ L + V G+I+ + A+ L+D + + Sbjct: 20 EQPWPVRTVSAKVAGWIDR-LGSIWVEGQITQINARPGTRTAFLVLRDPSADMSLSITCS 78 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 L+ EG ++ GK++ + G + + + G G LL +E+ + L Sbjct: 79 PQLLHNSPVPLTEGSRVVMFGKLSFYTGRGTVSLRVTEIRAVGIGELLARIERLRALLAA 138 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF + K P+PF+P I +IT A +D++ R+P + + + VQG Sbjct: 139 EGLFDPRLKRPLPFLPGTIGLITGRASAAEKDVVSVAHRRWPAVAIAVRNTAVQGPTAVP 198 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 +I A LKE P D+IILARGGGS+EDL F+DE + RAI + PI+SAIG Sbjct: 199 QIIEA------LKELDANPVVDVIILARGGGSVEDLLPFSDEALCRAIVACTTPIVSAIG 252 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D L+D+ ADLRA TPT AA+ VP + + +L R + +K + + + Sbjct: 253 HEPDSPLSDHVADLRAATPTDAAKRVVPDAVAEAALVADLRDRSAAALRSWVKRESHLIE 312 Query: 309 SLLKALPNSDQTLSCSRY--RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 L + L+ R ++RL ++ +I + R H+ R+ + + Sbjct: 313 QLRTRPVMASPLLAVDRRAEEVERLQAAGRRDVTRLIDSESRTIEHLRARLTTLGPAATL 372 Query: 367 QK 368 + Sbjct: 373 AR 374 Score = 82.5 bits (202), Expect = 1e-13, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + R L ++ + + + +++L ++ I S Sbjct: 295 RSAAALRSWVKRESHLIEQLRT---RPVMASPLLAVDRRAEEVERLQAAGRRDVTRLIDS 351 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQ----DTNNNFITQKRNLATKTRILINFFDGQ 493 ++ L + TL RGY +Q D + + + T+I + DG Sbjct: 352 ESRTIEHLRARLTTLGPAATLARGYAVVQRVVADGDPEVLRSVEDAPPGTQIRVRLADGA 411 Query: 494 ANAIVIN 500 A V+ Sbjct: 412 VRAAVMG 418 >gi|312880057|ref|ZP_07739857.1| Exodeoxyribonuclease VII large subunit [Aminomonas paucivorans DSM 12260] gi|310783348|gb|EFQ23746.1| Exodeoxyribonuclease VII large subunit [Aminomonas paucivorans DSM 12260] Length = 407 Score = 222 bits (566), Expect = 1e-55, Method: Composition-based stats. Identities = 104/356 (29%), Positives = 168/356 (47%), Gaps = 11/356 (3%) Query: 17 VSELSYHLKHIVE-SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 V EL+ ++ + + V+GEI G + SGH YF+L ++R+ +++ + Sbjct: 11 VDELTERIREQLSTPEFGQLFVKGEIQGLKHHP-SGHVYFTLLGKNARVACALFRSQAER 69 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + P+EG E V G++ +P YQ++ + P G G A E ++KL +EGLF Sbjct: 70 VLLWPKEGDETAVQGRLDVYPPRGSYQLLASRIWPLGVGEQARAKELLREKLNQEGLFDP 129 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEIANAI 194 + K P P P + VITS +GA D+ + + RF P R++ P +VQG E + A Sbjct: 130 RLKRPFPQYPLRVGVITSRSGAAFHDVRRVAALRFPPARLLWIPSQVQGVEAADSLVRAF 189 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 +L + D ++L RGGGS +DL F+DE +VRAI P+ +GHE D T Sbjct: 190 RRL------QGEEELDCVLLVRGGGSRDDLNPFDDEGVVRAIRQCPFPVAVGVGHEVDRT 243 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L+D AADL APTP+GAAE +P +E + + L + R ++ L AL Sbjct: 244 LSDLAADLSAPTPSGAAERVLPDREECLRRIRREQESLRGPVARKVRSLGERLRLCSFAL 303 Query: 315 PNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L L R L + + + + + + +++ Sbjct: 304 ERPLRRRFLDPRVGDLSRNLSRLREAARACLRVQQDRLRSEMAALDALSPLAPLRR 359 Score = 83.3 bits (204), Expect = 8e-14, Method: Composition-based stats. Identities = 20/170 (11%), Positives = 62/170 (36%), Gaps = 5/170 (2%) Query: 344 FRKYRHFNHIINRIKSDFL---IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 R + + + + + +R+ L + + ++ ++ + E++ Sbjct: 238 HEVDRTLSDLAADLSAPTPSGAAERVLPDREECLRRIRREQESLRGPVARKVRSLGERLR 297 Query: 401 ILHMLREQTKNR--IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + E+ R + + + ++R+ ++ + L + + L Sbjct: 298 LCSFALERPLRRRFLDPRVGDLSRNLSRLREAARACLRVQQDRLRSEMAALDALSPLAPL 357 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 +RGY + + I++ + +T + + + DG+A V+ +E P Sbjct: 358 RRGYALVSSPSGRRISRIASWEGETELRVRWLDGEARVRVLQVEREEEGP 407 >gi|294787515|ref|ZP_06752768.1| exodeoxyribonuclease VII, large subunit [Parascardovia denticolens F0305] gi|315226905|ref|ZP_07868693.1| exodeoxyribonuclease VII large subunit [Parascardovia denticolens DSM 10105] gi|294484871|gb|EFG32506.1| exodeoxyribonuclease VII, large subunit [Parascardovia denticolens F0305] gi|315121037|gb|EFT84169.1| exodeoxyribonuclease VII large subunit [Parascardovia denticolens DSM 10105] Length = 430 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 105/424 (24%), Positives = 185/424 (43%), Gaps = 16/424 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P +++ +SV+ LS VE N V G+I + G Y +L+DN Sbjct: 15 EPALSRDTTPDNPWSVAHLSQKWHQAVE-NWPATWVEGQIQEINTRRA-GSVYMTLRDNT 72 Query: 62 SRIDAII--WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + W+ + + G + +V G+ + + +I + + G G L Sbjct: 73 EEVTVQVSGWRNFAYQAAQFVQ-GDKVVVHGRPEIWMKRTSLSLIGDDIRRVGKGDLRQQ 131 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ +KKL EGLF + +K P+P P+ I +I +P D++ R+P + I Sbjct: 132 IEELRKKLKGEGLFDEANKVPLPEFPRRIGLICAPQARAEGDVVTNAKLRWPTIEFTIEH 191 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG+ CP+E+ AI +L+ P D+II+ARGGG+ EDL F+DE +VRA A Sbjct: 192 VHVQGEHCPEEVIAAIRKLDA------DPTIDVIIVARGGGAFEDLIGFSDEGVVRAAAA 245 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 P++SAIGHE DWTL D AAD+RA TPT AA+ VP + + + R+ + Sbjct: 246 CVTPLVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVMEQLALVAEAQRRIRERLTY 305 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + +++ L + + +D R L+ + + + Sbjct: 306 RLASEQQRIDAYKNRPSLTRPGSIVERPQLLVDDAVRRLDVAVRRLTDDASFRIEKLHAS 365 Query: 357 IKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + + + Q H+ + + + + L A + + + Sbjct: 366 LTALSPQATLNRGYAVVQDDQGHVVSDAALLTVGQKLILTLHRGKASTTVDQTRPAPTEA 425 Query: 415 YLHT 418 Sbjct: 426 KKRQ 429 Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 52/146 (35%), Gaps = 2/146 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + E Q+ I + + R +++ + + + + + Sbjct: 285 VMEQLALVAEAQRRIRERLT--YRLASEQQRIDAYKNRPSLTRPGSIVERPQLLVDDAVR 342 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R++ + + L + + + TL RGY +QD + ++ L ++ Sbjct: 343 RLDVAVRRLTDDASFRIEKLHASLTALSPQATLNRGYAVVQDDQGHVVSDAALLTVGQKL 402 Query: 486 LINFFDGQANAIVINKAPPKEQPTKK 511 ++ G+A+ V P + K+ Sbjct: 403 ILTLHRGKASTTVDQTRPAPTEAKKR 428 >gi|254819704|ref|ZP_05224705.1| exodeoxyribonuclease VII large subunit [Mycobacterium intracellulare ATCC 13950] Length = 415 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 163/369 (44%), Gaps = 12/369 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62 + + + + V ++ + ++ L V V G+++ S + L+D + Sbjct: 6 TSEPNSAENPFPVRAVAIRVAGWIDK-LGTVWVEGQLAQVSMRPDSKTVFMVLRDPAADM 64 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + + + EG + +V GK + + G + + + + G G LL +++ Sbjct: 65 SLSVTCPRDLVLNAPVKLAEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIDR 124 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 ++ L EGLF + K PIPF+P +I +IT A RD+ + R+P +R + V Sbjct: 125 LRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRASAAERDVRTVAAARWPAVRFAVRNTAV 184 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +I +A L+E D+I+LARGGGS+EDL F+DE + RAIA Sbjct: 185 QGPSAVAQIVDA------LRELDRDADVDVIVLARGGGSVEDLLPFSDETLCRAIAACRT 238 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+ISA+GHE D L D ADLRA TPT AA+ VP Q + +L R + + Sbjct: 239 PVISAVGHEPDNPLCDLVADLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVS 298 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + L L + R + ++ + + H+ R+ + Sbjct: 299 REQRDLAQIRSRPVLAEPLTALKARAEEIHRARSAIRRDITRLAATETERIGHLSARLAT 358 Query: 360 DFLIHNIQK 368 + + Sbjct: 359 LGPAATLAR 367 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 53/161 (32%), Gaps = 8/161 (4%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ +K +Q+ I+ + ++ + + + L +R + Sbjct: 255 LVADLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSREQRDLAQIRSRPVLA 314 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I + + I ++ + + + L + TL RGY +Q Sbjct: 315 EPLTALKARAEEIHRARSAIRRDITRLAATETERIGHLSARLATLGPAATLARGYAVVQS 374 Query: 468 ---TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + + TR+ + DG A+ A Sbjct: 375 VGPAESRVLRSVDDAPAGTRLRVRVADGAVAAVSEGPADGP 415 >gi|306820222|ref|ZP_07453864.1| exodeoxyribonuclease VII large subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551719|gb|EFM39668.1| exodeoxyribonuclease VII large subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 413 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 125/496 (25%), Positives = 212/496 (42%), Gaps = 87/496 (17%) Query: 10 LDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +VS+++ L + S V V GE+ + + G+ + SLKD+ S+I A+ Sbjct: 1 MKLKVLTVSQVNDSLSSYIYANPIFSSVRVVGEVFNLK-KTAYGYTFLSLKDDMSKISAM 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 + +F + G V GKI + Y ++I S SG G + +KL Sbjct: 60 TY-----LEDFDVKVGDTITVQGKINLYKKGGTYSLLINSYEKSGRGQEYENFKILYEKL 114 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 + G F + K IP P+ I VITS +GA ++DI+ I R+P+ ++ I+ K+QG+ Sbjct: 115 EKAGYFKSKIKKAIPKFPQSIGVITSASGAAVQDIMAVIKRRYPVVKLYIYDSKMQGEYV 174 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 + + N I +L + D II++RGGG +DL FN E I +A+ SIPIISA Sbjct: 175 EQSVINGIRRLEEV-------NVDTIIISRGGGDFDDLSSFNSENIAKAVYECSIPIISA 227 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHE D+ + D+ AD+RA TPT A E++VP L++ + LE++L Sbjct: 228 IGHEIDFVICDFVADMRASTPTMAGELSVPDISELRTKIRLLESKLI------------- 274 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + I R + I++IKS+ I Sbjct: 275 ------------------------------SSYKNEIIRYKNTLTNCISKIKSNAPYKKI 304 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM-LREQTKNRIFYLHTHIKKLIT 425 + HI +E +K LE K I L + L+ + + +I + L Sbjct: 305 SDKKNHI----SKLEANLKVEYEKKILELKSYIEKLDLDLKNKYEKKIQQSKNKVDFL-- 358 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 +++ Y + +G+ ++ + + ++L K I Sbjct: 359 --------------------ISVIEENNYVKIMSKGFAIVE-KQSKVVKSSKDLKDKDII 397 Query: 486 LINFFDGQANAIVINK 501 + DG +A+V + Sbjct: 398 RVKMIDGTISAVVKGE 413 >gi|188995089|ref|YP_001929341.1| exodeoxyribonuclease VII large subunit [Porphyromonas gingivalis ATCC 33277] gi|188594769|dbj|BAG33744.1| probable exodeoxyribonuclease VII large subunit [Porphyromonas gingivalis ATCC 33277] Length = 460 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 97/514 (18%), Positives = 194/514 (37%), Gaps = 75/514 (14%) Query: 13 PEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRI 64 P Y++++L+ +++ +ES V E SG R SGH Y L D +R+ Sbjct: 2 PSYTLTQLASAVRNCLESGFPGRYWVSAETSGVRV-GISGHCYLELLDKDTSGSQVTARM 60 Query: 65 DAIIWKGTLNKI--EFLPE------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115 A+IW + F E G+ LV+ ++ + + I + PS G Sbjct: 61 KAMIWASDYATLSGRFQRETGETFDSGLHVLVLVSVS-YHEQYGLSLRILDIDPSYTMGA 119 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPL 172 + ++ ++L +GL+ +P + IA+++S A D + +S F Sbjct: 120 MARKRKEIIEELRRQGLYDLNRSLSLPRPTQRIAIVSSGAAAGYEDFIAHLSHSAEHFCF 179 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 ++F +QG + + A+ ++ D++++ RGGG++ +L F+ I Sbjct: 180 YPVLFQAVMQGAQTEASVLGALERI-----AYHRDSFDVVVIIRGGGAVSELAAFDSLAI 234 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 +A A +PI++ IGH+ D T+ D A TPT A+ V + + +L +R Sbjct: 235 GQACARFPLPILTGIGHDRDETVVDLVAYRSLKTPTAVADFLVNCQREEWKLIDDLRSRA 294 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 + ++ Y L +L L+ + ++ Sbjct: 295 AEGLRMMMMYCHERLI---------------------QLSLRTPAILKSSVREEHHRIKS 333 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + +RI+ I Q + + + ++K L+ + A L +L Sbjct: 334 VEDRIRLAA-KQRIAFGLQQLQIASRSLPAMMKSELKQNTGRLDQVAARLPLL------- 385 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 ++ +K+ + + + ++ TL+RG+ + + Sbjct: 386 ------------------VTANLKNYNRRLETNEQAIRLLHPNATLRRGFAIVL-KDGKA 426 Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 I L R++ F DG +A+V K Sbjct: 427 IRSHSELHKGDRLVAQFADGSVSAVVDQPQKGKR 460 >gi|119512646|ref|ZP_01631721.1| Exonuclease VII, large subunit [Nodularia spumigena CCY9414] gi|119462717|gb|EAW43679.1| Exonuclease VII, large subunit [Nodularia spumigena CCY9414] Length = 407 Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats. Identities = 110/362 (30%), Positives = 182/362 (50%), Gaps = 17/362 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWK 70 SV+ L+ +++ ++E + L V V GE+S +F+L+D + I ++WK Sbjct: 12 LSVAGLTDYIRLLLEQDNQLRQVWVIGEVSSANNHRRG--LFFTLQDPEATAGIKCVVWK 69 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + K+ +P G + +++G I +P +YQ+ + IP+G+G ++ K +LL E Sbjct: 70 SQIPKLAQMPIAGEQLIILGSIRVYPQRGEYQLSVWQAIPAGAGLQALGYQQLKNRLLAE 129 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF + K P+P P+ IAV+TSPT A DI + + R+P L+V+ P VQG++ P Sbjct: 130 GLFDTERKRPLPLHPQTIAVVTSPTAAAWGDIQKTLKQRYPGLQVLFSPATVQGEQAPDS 189 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++N R ++IL+RGGG++E+L FNDE +VRA+A SIP+I+ IGH Sbjct: 190 IVKAINRVNR------DGRAQVLILSRGGGAVEELACFNDERVVRAVATCSIPVITGIGH 243 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D +L D AD TPT AAE VP L L + N L Sbjct: 244 QRDESLVDLVADACVHTPTAAAETVVPSLADLYFQHRQRIVALREAVGEFTVNSENKLQG 303 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY---RHFNHIINRIKSDFLIHNI 366 L L + L +L + + +++ + R + + + ++ S + Sbjct: 304 LRDRLRRLGLD-KQVQQELQQLNWKRQQLIQVTLGRSHQAQQRLELLREKLASLDPKAVL 362 Query: 367 QK 368 Q+ Sbjct: 363 QR 364 Score = 87.5 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 22/170 (12%), Positives = 51/170 (30%), Gaps = 6/170 (3%) Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + + + +L ++ H L ++RQ I+ ++ Sbjct: 241 IGHQRDESLVDLVADACVHTPTAAAETVVPSLADLYFQHRQRIVALRE------AVGEFT 294 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + E K + + R ++ + ++ + + + + L Sbjct: 295 VNSENKLQGLRDRLRRLGLDKQVQQELQQLNWKRQQLIQVTLGRSHQAQQRLELLREKLA 354 Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 S K L+RGY ++ N L +LI G+ V+ Sbjct: 355 SLDPKAVLQRGYAVVRRENGEIARSASELTVGEDLLIQLGLGEVKVKVME 404 >gi|239979637|ref|ZP_04702161.1| exodeoxyribonuclease VII large subunit [Streptomyces albus J1074] gi|291451502|ref|ZP_06590892.1| exodeoxyribonuclease VII large subunit [Streptomyces albus J1074] gi|291354451|gb|EFE81353.1| exodeoxyribonuclease VII large subunit [Streptomyces albus J1074] Length = 414 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 176/404 (43%), Gaps = 12/404 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 ++ V +S + ++ L V V G+I+ +G + +L+D I Sbjct: 4 DTSADAPLPVGAVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPAHDISVG 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 ++ + + + EG +V K + + + + P G G LL LE+R+K Sbjct: 63 VTCYRKVFDAVADVVTEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLVRLEQRRK 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG Sbjct: 123 ALAAEGLFALERKRPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVAVQGV 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ A+ E P D+I++ARGGGS+EDL F+DE ++R ++ + P++ Sbjct: 183 HAVAQVTEAVR------ELDAHPEVDVIVVARGGGSVEDLLPFSDEELIRTVSAARTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D ADLRA TPT AA+ VP + L R L+ + Sbjct: 237 SAIGHEPDTPLLDLVADLRASTPTDAAKKVVPDVGEEHERVRQLRDRARRAAHGLVDREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + + R+ L L ++ R +H R+ + Sbjct: 297 RGLAHALARPSIQHPHRMVEEREERVSALLDRSRRTLGHLLDRADSELSHTRARVVALSP 356 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 +Q+ + + + + + L + L + R Sbjct: 357 AATLQRGYAVLQTAEGAVVRAPEDVAYGAELRARVAEGELVVRR 400 Score = 87.1 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 42/130 (32%), Gaps = 2/130 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + + + +A + + + + L+ R Sbjct: 272 EEHERVRQLRDRARRAAHGLVDREERGLAHALARPSI--QHPHRMVEEREERVSALLDRS 329 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L H + + +S T + + + TL+RGY +Q + ++A + Sbjct: 330 RRTLGHLLDRADSELSHTRARVVALSPAATLQRGYAVLQTAEGAVVRAPEDVAYGAELRA 389 Query: 488 NFFDGQANAI 497 +G+ Sbjct: 390 RVAEGELVVR 399 >gi|256785467|ref|ZP_05523898.1| exodeoxyribonuclease VII large subunit [Streptomyces lividans TK24] Length = 390 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 12/370 (3%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTLNK 75 E+S + ++ L V V G+I+ +G + +L+D + ++ + Sbjct: 2 GEVSRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSYDISVSVTCYRQVFDA 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + + EG +V K + + + + P G G LL LE+ KK L EGLF+ Sbjct: 61 VADVVGEGARVVVHAKPEWYAPRGQLSLRAAEIKPVGVGELLARLEQLKKALAREGLFAA 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K P+PF+P++I ++ A RD+L+ R+P +R + V VQG ++ A+ Sbjct: 121 ERKQPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGVHAVPQVVQAV 180 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 +L+ D+I++ARGGGS+EDL F+DE +VRA+A P++SAIGHE D Sbjct: 181 KELDAR------DDVDVIVVARGGGSVEDLLPFSDEQLVRAVAACRTPVVSAIGHEPDSP 234 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313 L D ADLRA TPT AA+ VP + L R + + + L L Sbjct: 235 LLDLVADLRASTPTDAAKKVVPDVGEEYERVRLLRDRARRCVAAFVDREERGLAHALARP 294 Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + + + + ++ L +L + R H R+ + +++ Sbjct: 295 SIQDPHRMIEERAEQVTALLDRGRRSLRHHLDRADSELTHTHARVVALSPAATLKRGYAV 354 Query: 373 ILEKQQHIEQ 382 + H + Sbjct: 355 LQRADGHAVR 364 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 3/124 (2%) Query: 379 HIEQIVKQHLRYIFLEKKEK---IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + + + F++++E+ A+ + I + L+ R L H + Sbjct: 266 RLLRDRARRCVAAFVDREERGLAHALARPSIQDPHRMIEERAEQVTALLDRGRRSLRHHL 325 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + ++ T + + + TLKRGY +Q + + + + + +G + Sbjct: 326 DRADSELTHTHARVVALSPAATLKRGYAVLQRADGHAVRDPGEVEPGETLRARVSEGDFS 385 Query: 496 AIVI 499 V Sbjct: 386 VRVD 389 >gi|255015908|ref|ZP_05288034.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 2_1_7] Length = 444 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 100/519 (19%), Positives = 187/519 (36%), Gaps = 96/519 (18%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59 M P S + S+ EL+ ++ + VR E+S R SSGH Y + Sbjct: 1 MRPNLNNLSGEKEALSLLELNTRIRGALSRAFPETCWVRAEMSDVRVNTSSGHCYLEFVE 60 Query: 60 NH-------SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104 + +++ IW T ++ F E G + LV + + Sbjct: 61 KNVQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119 Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163 + + P+ G ++ + ++L EEG+F+ + P P +P+ IA+ITSPT A D + Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELPFPLLPRRIAIITSPTAAGYEDFM 179 Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220 +++ +P +FP +QG+ + A+ ++ ++ D++++ RGGG+ Sbjct: 180 NQLTRNKGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234 Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280 DL F+ ++ A +PII+ IGHE D T+ D A R TPT AE + Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERDDTVVDLVAHTRMKTPTAVAEFLI----- 289 Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340 + + + L R + L ++ + Sbjct: 290 -------------------------------SRMDSVGEELESLRQDVSLLAMDILSRQK 318 Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + ++ + I++NR + + +V ++ Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASRLPAMVSG-----------LLS 359 Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + E T+ R+ T R + IK + LKR Sbjct: 360 RRQSVLENTELRLRNGITSKLSESGRFIQLTEQFIKMA--------------SPDYILKR 405 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 GY+ + I +L + F DG+ +I+ Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443 >gi|325280015|ref|YP_004252557.1| Exodeoxyribonuclease 7 large subunit [Odoribacter splanchnicus DSM 20712] gi|324311824|gb|ADY32377.1| Exodeoxyribonuclease 7 large subunit [Odoribacter splanchnicus DSM 20712] Length = 460 Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats. Identities = 92/509 (18%), Positives = 187/509 (36%), Gaps = 75/509 (14%) Query: 16 SVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDAI 67 S+ EL+ +K ++++ V + EI+ ++ SGH Y L D + Sbjct: 6 SLYELNNRIKQTLKASFADSVWITAEITEV-QLNRSGHCYLQLADKREQEDSIVATARGT 64 Query: 68 IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118 IW T + E+G++ L+ ++ F Y + I + P+ G L Sbjct: 65 IWAFTFRTLRPYFETTTGRQLEKGMKVLLNVEV-VFHELYGYSLNIRDIDPTYTIGDLER 123 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRVI 175 + +L +G+ + P +PK IAVI+SPT A + D + ++ + +V Sbjct: 124 KKREILAQLEADGVIDMNRELEFPVLPKTIAVISSPTAAGLGDFMNQLQTNPYGYRFQVK 183 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 +FP +QGD+ + A+ ++ D++++ RGGGS DL F+ + Sbjct: 184 LFPAIMQGDKTTDSVIAALERIYE-----YESVFDVVVIIRGGGSQTDLGCFDSYEMAAN 238 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA +P+I+ IGHE D T+ D A +R TPT AA + L + Sbjct: 239 IAQFPLPVIAGIGHERDETIVDRVAHMRVKTPTAAAAFLIGTFREQDGQLETWKNDFIVG 298 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + L+ + N + ++++++ + + Sbjct: 299 VQELLHNEQNRQVVRISDFKR---------------------SVQVVLTGNRTNLKLLSQ 337 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R+ H + ++ ++ + + + ++ ++ +Q RI Sbjct: 338 RLD-----HASENYIRNRQVYFDRLKMKITGRIDVLADRQRNRLENFGKALQQQTGRI-- 390 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 H + + ++ KN L+RGY+ + N + + Sbjct: 391 -------------------FADQHRRLELAATTIKYVDPKNVLERGYSITRL-NGKAVRK 430 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPP 504 L + G+ ++N + Sbjct: 431 AAVLQAGEIVETELAHGKIQCQILNNSAT 459 >gi|319950220|ref|ZP_08024147.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4] gi|319436124|gb|EFV91317.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4] Length = 454 Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats. Identities = 101/374 (27%), Positives = 168/374 (44%), Gaps = 13/374 (3%) Query: 1 MN-PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+ S + V +S + + L V V G+I+ + A+ +L+D Sbjct: 1 MSASSPGTQSSPESPWPVRVVSDQIAAWIHR-LGAVWVEGQITQLSLRPGTRTAFLTLRD 59 Query: 60 N--HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 + + +++ EG +V G + G + + + + P G G LL Sbjct: 60 PSVDNSLTLTCPPRLISESPVPVTEGSRVVVRGTPRFYTGRGSFSLQVSEIRPVGVGELL 119 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +E+ K+ L EGLF + K P+PF+P + +IT A RD+++ R+P +R + Sbjct: 120 ARIERLKQALAAEGLFDPRLKRPLPFLPTCVGLITGRASAAERDVVEVARGRWPDVRFAV 179 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 VQG +I +A L E P D+IILARGGGS+EDL F+DE ++RAI Sbjct: 180 RNTAVQGVSAVPQILDA------LAELDADPVVDVIILARGGGSVEDLLPFSDEALIRAI 233 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P++SAIGHE D L+D ADLRA TPT AA+ VP + + AR + Sbjct: 234 SRCRTPVVSAIGHEPDSPLSDLVADLRAATPTDAAKRVVPDVVEERRRIAEARARTARAL 293 Query: 297 IRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ + N L ++ + N + + R ++ II + H+ Sbjct: 294 RGWVERERNQLAAVRSRPCMANPHGIVDSRAEVVAEALRAARRDITRIIDSESTSLGHLS 353 Query: 355 NRIKSDFLIHNIQK 368 R+ + + + Sbjct: 354 ARLTTLGPAATLAR 367 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 41/137 (29%), Gaps = 4/137 (2%) Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + + + ++ I S TS+ + L + Sbjct: 299 RERNQLAAVRSRPCMANPHGIVDSRAEVVAEALRAARRDITRIIDSESTSLGHLSARLTT 358 Query: 452 FAYKNTLKRGYTSIQDT----NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 TL RGY +Q + ++ + +++ I DG +A V+ P + Sbjct: 359 LGPAATLARGYAVVQSVAGVHDGRVVSSIADAPPGSQLRIRVSDGALSAAVLGSTPAAGR 418 Query: 508 PTKKCQLHNNKREKQGT 524 T + + Sbjct: 419 TTAPAPTTTGSPTPESS 435 >gi|262384189|ref|ZP_06077325.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_33B] gi|262295087|gb|EEY83019.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_33B] Length = 444 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 95/519 (18%), Positives = 187/519 (36%), Gaps = 96/519 (18%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59 M P S + S+ EL+ ++ + VR E+S R SSGH Y + Sbjct: 1 MRPNLNNLSGEKEALSLLELNIRIRGALSRAFPETCWVRAEMSDVRVNASSGHCYLEFVE 60 Query: 60 NHSR-------IDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104 +++ + IW T ++ F E G + LV + + Sbjct: 61 KNAQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119 Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163 + + P+ G ++ + ++L EEG+F+ + P +P+ IA+ITSPT A D + Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELLFPLLPRRIAIITSPTAAGYEDFM 179 Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220 +++ +P +FP +QG+ + A+ ++ ++ D++++ RGGG+ Sbjct: 180 NQLTRNEGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234 Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280 DL F+ ++ A +PII+ IGHE D T+ D A R TPT AE + Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERDDTVVDLVAHTRMKTPTAVAEFLI----- 289 Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340 + + + L R + L ++ + Sbjct: 290 -------------------------------SRMDSVGEELESLRQDVSLLAMDILSRQK 318 Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + ++ + I++NR + + + + Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASRLPSM---------------AS 355 Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 L R+ + ++ K+ + +T + ++ + LKR Sbjct: 356 GLLSRRQSVLENTELR----------LRNGITSKLSEDVRFIQLTEQFIKMASPDYILKR 405 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 GY+ + I +L + F DG+ +I+ Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443 >gi|145222665|ref|YP_001133343.1| exodeoxyribonuclease VII large subunit [Mycobacterium gilvum PYR-GCK] gi|145215151|gb|ABP44555.1| Exodeoxyribonuclease VII large subunit [Mycobacterium gilvum PYR-GCK] Length = 415 Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 170/369 (46%), Gaps = 14/369 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62 +++ + + V ++ + ++ L V V G+I+ +S A+ +L+D + Sbjct: 10 PGQSADN--PFPVRGVAIRVAGWIDK-LGAVWVEGQIAQLTLRPNSNTAFITLRDPAADM 66 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + + + +G + +V GK + + G + + + + G G LL +E+ Sbjct: 67 SLSLTCPRDLVVNAPVKMSDGTQVIVYGKPSFYTGRGTFSLRVSEIRAVGIGELLARIER 126 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 ++ L EGLF + K PIPF+P I +IT A DI+ S R+P +R + V Sbjct: 127 LRRLLDAEGLFDPRLKRPIPFLPDTIGLITGRASAAEHDIVAVASGRWPAVRFAVRHTVV 186 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +I +A+ L+ P D+I+LARGGGS+EDL F+DE + R IA + Sbjct: 187 QGPNAVPQIVDALRALDA------DPDVDVIVLARGGGSVEDLLPFSDETLCREIARCTT 240 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHE D L D ADLRA TPT AA+ VP Q+ + +L R + + Sbjct: 241 PVVSAIGHEPDNPLCDLVADLRAATPTDAAKRIVPDTAAEQALITDLRRRSARALRNWVN 300 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + + L + + + R + ++ ++ + H+ R+ + Sbjct: 301 RETHVVTQLRSRPVMSRPLAAIDARSDEIHRARAAVRRDITRLVGIESDRIGHLSARLTT 360 Query: 360 DFLIHNIQK 368 + + Sbjct: 361 LGPAATLAR 369 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 30/106 (28%), Gaps = 4/106 (3%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + I I + + ++ + + + L + TL R Sbjct: 310 RSRPVMSRPLAAIDARSDEIHRARAAVRRDITRLVGIESDRIGHLSARLTTLGPAATLAR 369 Query: 461 GYTSIQD--TNN--NFITQKRNLATKTRILINFFDGQANAIVINKA 502 GY +Q + + + TR+ + DG A Sbjct: 370 GYAVVQTIPESGEPRILGSVDDAPAGTRLRVRVADGAITATSEGGQ 415 >gi|256374876|ref|YP_003098536.1| exodeoxyribonuclease VII, large subunit [Actinosynnema mirum DSM 43827] gi|255919179|gb|ACU34690.1| exodeoxyribonuclease VII, large subunit [Actinosynnema mirum DSM 43827] Length = 420 Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats. Identities = 95/373 (25%), Positives = 155/373 (41%), Gaps = 12/373 (3%) Query: 1 MNPFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M + P + V ++Y + + L V V G+++ + A+ +L+ Sbjct: 1 MTEQKAQPPRSSPEEPWPVRTVAYKIADWI-GRLGDVWVEGQVTQLSARPGTKVAFLTLR 59 Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 D + + + E EG +V GK + + ++ + G G LL Sbjct: 60 DPSADLSMSLTAPVGLVREGQLTEGSRVVVHGKPNYYAARGTISLRVDEIRAVGIGELLA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ +K L EGLF + K PF+P I ++T A RD+L R+P R + Sbjct: 120 RIERLRKLLAAEGLFDARRKRRPPFLPNKIGLVTGRASAAERDVLTNAQARWPAARFRVI 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 V VQG E+ A L E P D+I+LARGGGS+EDL F+DE + RA++ Sbjct: 180 NVAVQGPSAVPEVVRA------LGELDADPEVDVIVLARGGGSVEDLLPFSDEALCRAVS 233 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + P++SAIGHE D L D+ AD+R TPT A + VP L R + Sbjct: 234 DCRTPLLSAIGHEPDTPLVDHVADVRCSTPTDAGKRVVPDVAEETERLRQARDRARRALR 293 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L++L L + L + RL + + + Sbjct: 294 GWVDRERKLLDALRTRPALADPHGPLERRSEEVQRLRDRALRAVRNRVDAENAGLAATSA 353 Query: 356 RIKSDFLIHNIQK 368 R+ + + + Sbjct: 354 RLTTLGPAATLAR 366 Score = 84.8 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 38/105 (36%), Gaps = 4/105 (3%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + +++L R + +++ + + ++ T+ L + T Sbjct: 304 DALRTRPALADPHGPLERRSEEVQRLRDRALRAVRNRVDAENAGLAATSARLTTLGPAAT 363 Query: 458 LKRGYTSIQ--DTNNN--FITQKRNLATKTRILINFFDGQANAIV 498 L RGY +Q + + + TR+ + DG +A+V Sbjct: 364 LARGYAVVQLVSSEGTEGVLRSAADAPAGTRLRVRVADGAVHAVV 408 >gi|254423650|ref|ZP_05037368.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. PCC 7335] gi|196191139|gb|EDX86103.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. PCC 7335] Length = 406 Score = 220 bits (561), Expect = 4e-55, Method: Composition-based stats. Identities = 109/359 (30%), Positives = 185/359 (51%), Gaps = 15/359 (4%) Query: 17 VSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLK--DNHSRIDAIIWKGT 72 V+ L+ +LK ++E + L V V GE+S +F+L+ D + I ++WK Sbjct: 15 VAGLTDYLKLLLEEDAHLHKVWVVGEVSSANHHRQG--CFFTLQEPDGSAAISCVVWKSQ 72 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 L ++ P+ G + V+G+I +P YQ+ + ++P+G G + + +L EGL Sbjct: 73 LPRLTTAPKVGEQVTVLGQIRLYPKRGTYQLTVWQVLPAGEGLQALRYRRLRARLAAEGL 132 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F + K P+P P+++AV+TS A DI + + R P LRV++ P VQG + P IA Sbjct: 133 FDEDRKRPLPAYPRMLAVVTSIQAAAWGDIQRTLVQRSPGLRVLLSPAVVQGPQAPASIA 192 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI +++ R D+++LARGGG++EDL F+DE +V AIA S IP+++ IGH+ Sbjct: 193 KAIARVDR------DGRADVLMLARGGGAVEDLACFDDERVVMAIAASPIPVVTGIGHQR 246 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +LAD AD A TPT AAEM P + L +N R ++ R +++ + SL Sbjct: 247 DESLADLVADACAHTPTAAAEMITPSLDELYQEQVNYLQRAGQVVARRLQHAQAQVQSLR 306 Query: 312 KALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L D+ L+ + L ++L + + + + + + +++ Sbjct: 307 TRLQRQRVDRQLTQHQKSLVWQKQQLISAINQRLQHQQHQHQLLQEILVTLDPQAVLKR 365 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 6/161 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKI 399 ++ ++ + + + E Q +++ + R + + + Sbjct: 244 HQRDESLADLVADACAHTPTAAAEMITPSLDELYQEQVNYLQRAGQVVARRLQHAQAQVQ 303 Query: 400 AILHML-REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 ++ L R++ ++ + ++ ++ +++ + IL + + L Sbjct: 304 SLRTRLQRQRVDRQLTQHQKSLVWQKQQLISAINQRLQHQQHQHQLLQEILVTLDPQAVL 363 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 KRGY ++ T L T + I G+ A V Sbjct: 364 KRGYAIVKTA-GEIATDANQLPPGTELEIQLGKGKVKATVS 403 >gi|269795926|ref|YP_003315381.1| exodeoxyribonuclease VII large subunit [Sanguibacter keddieii DSM 10542] gi|269098111|gb|ACZ22547.1| Exodeoxyribonuclease VII large subunit [Sanguibacter keddieii DSM 10542] Length = 427 Score = 220 bits (561), Expect = 4e-55, Method: Composition-based stats. Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62 ++ + V LS + ++ ++ + V G++ +G A+ +L+D + Sbjct: 26 AKASDTTAENPWPVRLLSAKISDYIDR-MAPLWVEGQVVQLNRRPGAGMAFLTLRDTDAD 84 Query: 63 -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + ++ L+ + +EG +V K T + +Q+ + L P G G LL +E Sbjct: 85 MSLPVSVYAKVLDGVSAPIDEGAHVVVRAKPTFWTKRGSFQMQADQLKPVGVGELLARIE 144 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K+ L EGLF K P+PF+P+++ ++ D++ R+P +R I V Sbjct: 145 HLKRVLAAEGLFDAGRKKPLPFLPRVVGLVCGRESKAEHDVVVNARARWPQVRFEIREVA 204 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +++ AI E P ++I++ARGGG++EDL F++E +VRA + Sbjct: 205 VQGVSAVPQVSAAIA------ELDAHPDVEVIVVARGGGAVEDLLPFSNEALVRAASACR 258 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHETD L D AD RA TPT AA+ VP ++ L R+ + + + Sbjct: 259 TPLVSAIGHETDAPLLDLVADYRASTPTDAAKRIVPDVSEERARLTQALGRMRSAVTHRV 318 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L++ L + ++ R L+ ++ + + +++ Sbjct: 319 RQEQAGLDATRSRPVLAAPHTMIETRERDVEAAVRAGRSGLDRLLSSASSTVDRLAAQVR 378 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 379 ALSPAATLDR 388 Score = 97.9 bits (242), Expect = 4e-18, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 55/150 (36%), Gaps = 5/150 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ ++ ++ + E++ + Q + + + +++ A L R + Sbjct: 276 LVADYRASTPTDAAKRIVPDVSEERARLTQALGRMRSAVTHRVRQEQAGLDATRSRPVLA 335 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 I ++ + L + S ++V +++ + TL RGY +Q Sbjct: 336 APHTMIETRERDVEAAVRAGRSGLDRLLSSASSTVDRLAAQVRALSPAATLDRGYAVVQG 395 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAI 497 + + + ++AT + I G+ A Sbjct: 396 PDGSVVRSPDDVATGDALRIRLASGEITAT 425 >gi|296271023|ref|YP_003653655.1| exodeoxyribonuclease VII large subunit [Thermobispora bispora DSM 43833] gi|296093810|gb|ADG89762.1| exodeoxyribonuclease VII, large subunit [Thermobispora bispora DSM 43833] Length = 402 Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats. Identities = 104/370 (28%), Positives = 169/370 (45%), Gaps = 15/370 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + K S + P + + + + L V V G+I+ G + +L+D + Sbjct: 1 MTAKTSPESP-LPIRSVLQMVAQWI-GRLGTVWVEGQITELTAR--GGTVFLTLRDPVAN 56 Query: 64 IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + A + + P +G ++ K + + + P G G LL LE Sbjct: 57 VSARVLCSRSVYEATVPRPVDGARVVMHVKADFYVNKGSFAFTALEIRPVGIGELLARLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF+ + K +PF+P+ I +I A RD+L+ R+P +R + PV Sbjct: 117 RLRQTLAAEGLFNVERKRRLPFLPRNIGLICGRGSAAERDVLENARRRWPAVRFTVEPVA 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG EI A+ +L+ P D+II+ARGGGS+EDL F+DE +VRA+A Sbjct: 177 VQGPYAVAEIIEALRKLDA------DPGIDVIIIARGGGSLEDLLPFSDEALVRAVAACR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D ADLRA TPT AA+ VP + + L R +I I Sbjct: 231 TPVVSAIGHEQDTPLLDLVADLRASTPTDAAKKVVPDVGEELALIHQLRERGRRVIGGWI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L ++ L + + + ++D L L ++ R H+ R+ Sbjct: 291 ARESAWLEAVRSRPSLADPLREIDRRAEQIDSLRDRSRRCLAGMLDRAADSLEHLRARLV 350 Query: 359 SDFLIHNIQK 368 + +Q+ Sbjct: 351 ALSPAATLQR 360 Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 54/162 (33%), Gaps = 5/162 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + ++ +++ +K + E+ I Q+ ++ R I + A L Sbjct: 239 HEQDTPLLDLVADLRASTPTDAAKKVVPDVGEELALIHQLRERGRRVIGGWIARESAWLE 298 Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 +R + I I L R L+ + S+ L + + TL Sbjct: 299 AVRSRPSLADPLREIDRRAEQIDSLRDRSRRCLAGMLDRAADSLEHLRARLVALSPAATL 358 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 +RGY +Q + + + + + F D + I + Sbjct: 359 QRGYAIVQRPSGEVVRLAGEVRPGDELSVRFSDDRVTVIASD 400 >gi|309812409|ref|ZP_07706164.1| exodeoxyribonuclease VII, large subunit [Dermacoccus sp. Ellin185] gi|308433714|gb|EFP57591.1| exodeoxyribonuclease VII, large subunit [Dermacoccus sp. Ellin185] Length = 479 Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats. Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P ++ + V LS + V+ +S + V G+I + AY +L+D Sbjct: 15 PALAGDTTAEQPWPVRVLSMKIAQYVDR-MSPLWVEGQIVQLNVRART--AYLTLRDADV 71 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + TLN + EG +V K T + + ++ P G G LL L Sbjct: 72 DMSLSLTVPTNTLNAMGPAVREGARVVVHAKPTFWTKRGSLMMEGRTMRPVGEGELLLRL 131 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K+ L EGLF+ K P+PF+P++I +IT GA D+++ R+P I V Sbjct: 132 EQLKRTLDAEGLFAPDRKRPLPFLPRVIGLITGREGAAENDVVENARRRWPAAHFEIRHV 191 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +C ++ A L+E D+I++ARGGGS EDL F++E +VRA++ + Sbjct: 192 PVQGPDCVTAVSGA------LRELDGLDHVDVIVIARGGGSFEDLLGFSNETLVRAVSAA 245 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGH+ D L D+ AD RA TPT AA++ VP Q++L ARL+ + Sbjct: 246 RTPVVSAIGHDVDTPLLDHVADRRASTPTDAAKLVVPDLAAEQTALAQHRARLSQGLRGR 305 Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + LN L ++ R +DRL + + + R H ++ Sbjct: 306 FAAERRHLNSLVGRPVLREPGTLVTQQRDEVDRLTNRSAYAMRQRLTRARDQIAHGRAQV 365 Query: 358 KSDFLIHNIQK 368 + + + Sbjct: 366 VALSPQKTLDR 376 Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 16/163 (9%), Positives = 54/163 (33%), Gaps = 4/163 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + + + + Q + R+ + + + + + + +L Sbjct: 284 LAAEQTALAQHRARLSQGL--RGRFAAERRHLNSLVGRPVLREPGTLVTQQRDEVDRLTN 341 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R + + ++ ++ + + + + TL RGY +Q + + + + +++ + Sbjct: 342 RSAYAMRQRLTRARDQIAHGRAQVVALSPQKTLDRGYAVVQHADGSLVMARDDVSVDDIL 401 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQLHNN--KREKQGTQG 526 + G + P + K+ TQG Sbjct: 402 KVTVSQGNFAVTPYSGKPRTRRAGTPTTTKARTAASSKKATQG 444 >gi|34540858|ref|NP_905337.1| exodeoxyribonuclease VII large subunit [Porphyromonas gingivalis W83] gi|34397172|gb|AAQ66236.1| exodeoxyribonuclease VII, large subunit [Porphyromonas gingivalis W83] Length = 460 Score = 220 bits (560), Expect = 5e-55, Method: Composition-based stats. Identities = 96/513 (18%), Positives = 195/513 (38%), Gaps = 75/513 (14%) Query: 13 PEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRI 64 P Y++++L+ +++ +ES V E SG R SGH Y L D +R+ Sbjct: 2 PSYTLTQLASAVRNCLESGFPGRYWVSAETSGVRV-GISGHCYLELLDKDTSGSQVTARM 60 Query: 65 DAIIWKGTLNKI--EFLPE------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115 A+IW + F E G+ LV+ ++ + + I + PS G Sbjct: 61 KAMIWASDYATLSGRFQRETGETFDSGLHVLVLVSVS-YHEQYGLSLRILDIDPSYTMGA 119 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPL 172 + ++ ++L +GL+ +P + IA+++S A D + +S F Sbjct: 120 MARKRKEIIEELRRQGLYDLNRSLSLPRPTQRIAIVSSGAAAGFEDFIAHLSHSAEHFCF 179 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 ++F +QG + + A+ ++ D++++ RGGG++ +L F+ I Sbjct: 180 YPVLFQAVMQGAQTEASVLGALERI-----AYHRDSFDVVVIIRGGGAVSELAAFDSLAI 234 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 +A A +PI++ IGH+ D T+ D A TPT A+ V + + +L +R Sbjct: 235 GQACARFPLPILTGIGHDRDETVVDLVAYRSLKTPTAVADFLVNCQREEWKLIDDLRSRA 294 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 + ++ Y L +L L+ + ++ Sbjct: 295 AEGLRMMMMYCHERLI---------------------QLSLRTPAILKSSVREEHHRIKS 333 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + +RI+ +Q I Q ++ + + E K+ L + Sbjct: 334 VEDRIRL--------AAKQRIAFGLQQLQIASRSLPALMKSELKQNTGQLDQV------- 378 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 R+ +++ +K+ + + + ++ TL+RG+ + ++ Sbjct: 379 -----------AARLPLLVTANLKNYNRRLETNEQAIRLLHPNATLRRGFAIVL-KDDKA 426 Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I L ++ F DG +A+V K Sbjct: 427 IRSHSELHKGDHLVAQFADGSVSAVVDQPQKGK 459 >gi|262182739|ref|ZP_06042160.1| exodeoxyribonuclease VII large subunit [Corynebacterium aurimucosum ATCC 700975] Length = 413 Score = 220 bits (560), Expect = 6e-55, Method: Composition-based stats. Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +Q + + V +++ +K +E L + V G+I+ + +Y +L+D Sbjct: 1 MNQPANSAETPWPVGKVNDQVKGWIER-LGFLWVEGQITQLNMKPTWKLSYITLRDVEQE 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + ++G +V GK + G + + + + G G LL +E Sbjct: 60 KSVQLTCNTSLIRNAPSPLKDGDRVVVYGKPAFYAGRGSFSLWVTEIRHVGIGDLLARVE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 ++KL +EGL K P+P++PK I +IT RD+L R+P ++ + Sbjct: 120 MLRQKLRQEGLCDPSRKLPLPYLPKKIGLITGRGSHAERDVLSVAQDRWPAVQFNVINTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG ++ +A+ L+ P D+II+ARGGGS+EDL F++E + RA+A + Sbjct: 180 VQGATAVTQVIDALRTLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAEAR 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP + + +R+ + + Sbjct: 234 TPVVSAIGHEPDHPVLDDVADLRAATPTDAAKRVVPSASKEYALISEARSRMAAALRGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L ++ L + ++ R L+R + + + R+ + R+ Sbjct: 294 DRERRGLENIRSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVS 353 Query: 359 SDFLIHNIQK 368 + +++ Sbjct: 354 ALGPSATLER 363 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + I +++ + I ++SH++ V+ + + TL+R Sbjct: 304 RSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVSALGPSATLER 363 Query: 461 GYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQAN 495 GY + +D + +T +++ I DG Sbjct: 364 GYAIVQVLPRDGSGPEVVTSYTQSPPGSQLRIRVGDGSIT 403 >gi|86606620|ref|YP_475383.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. JA-3-3Ab] gi|86555162|gb|ABD00120.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. JA-3-3Ab] Length = 411 Score = 220 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 117/399 (29%), Positives = 206/399 (51%), Gaps = 16/399 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 FS+ + P SV +S +LK ++ + L+ + V GE+S +GH + +L D Sbjct: 3 FSKFRTRGLPLLSVGGVSGYLKSLLAGDPYLARLWVVGEVSSC-QRSRNGHLFLTLVDPE 61 Query: 62 S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 S + ++W+ ++ F PE G L +G++ + G S Y+++I L+P+G G L Sbjct: 62 SGDLLKGVVWQSQTARLSFWPEVGQRVLALGQLGIYSGGSYYRLVIWQLLPAGEGLLAWR 121 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 ++ K +L EGLF +Q +P P+ IAV++SP A DI + ++ R+P LRV+ P Sbjct: 122 FQQLKARLAAEGLFDNQRP--LPTHPQCIAVVSSPDAAGWGDIRRTLNQRYPGLRVLFAP 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 +VQG+ P+ I AI ++ R +++I+ARGGGS EDL FNDE +VRAIA Sbjct: 180 AQVQGEAAPESIVRAIRRVER------DGRAEVLIVARGGGSGEDLACFNDERVVRAIAE 233 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 SIP+++ IGH+ D TLADYAAD A TPT AAE VP LQ L +L + Sbjct: 234 CSIPVVTGIGHQRDETLADYAADYAAHTPTAAAERVVPDLRELQRQAFQLRQQLVERTLH 293 Query: 299 LIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + + L + ++ L ++ RL + + L + + ++ + + Sbjct: 294 ALEKAEQRWHHAQRRLAQVHPERLLQQAQERLAQQQQRLVQAVRHRLQQQQQRHQALQQH 353 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 +++ +++ + +++ + + + + + Sbjct: 354 LQALDPAAVLRRGYALVRDERGSLVRSHRLPPQTRLRIQ 392 Score = 83.7 bits (205), Expect = 7e-14, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 56/169 (33%), Gaps = 6/169 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF-----LEKKEK 398 ++ + ++ + E Q+ Q+ +Q + E++ Sbjct: 244 HQRDETLADYAADYAAHTPTAAAERVVPDLRELQRQAFQLRQQLVERTLHALEKAEQRWH 303 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 A + + + + + + R+ + H+++ + LQ+ L Sbjct: 304 HAQRRLAQVHPERLLQQAQERLAQQQQRLVQAVRHRLQQQQQRHQALQQHLQALDPAAVL 363 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 +RGY ++D + + L +TR+ I G A V P + Sbjct: 364 RRGYALVRDERGSLVRS-HRLPPQTRLRIQLASGSLWARVEESHEPPQT 411 >gi|88856100|ref|ZP_01130761.1| exodeoxyribonuclease VII large subunit [marine actinobacterium PHSC20C1] gi|88814668|gb|EAR24529.1| exodeoxyribonuclease VII large subunit [marine actinobacterium PHSC20C1] Length = 406 Score = 220 bits (559), Expect = 6e-55, Method: Composition-based stats. Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 16/370 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 F++ + VS LS ++ +E L + V GEI+ + S G+ Y LKD Sbjct: 3 FTEGPPTVDTPWPVSVLSQKIRGWIER-LGNAWVEGEITQWGS--SGGNIYGKLKDLEVD 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + I IW K+ ++G + + K + + + + G G LL LE Sbjct: 60 ATISFTIWSSVRTKLPNDLKQGDRVVALVKPNYWVKGGTLTMQVLEMRHVGLGDLLEKLE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 ++KL EGLF + +PF+P I ++T +D+L+ R+P ++ Sbjct: 120 LLRQKLRAEGLFEHKKP--LPFLPNCIGLVTGKDSDAEKDVLRNAQLRWPAVKFRTEHAA 177 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG+ E+ AI L+ P D+II+ARGGG ++L F+DE +VRA A Sbjct: 178 VQGERAVSEVTKAIRLLDA------DPEVDVIIVARGGGDFQNLLVFSDESLVRAAAECV 231 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D ADLRA TPT AA+ VP S + A + I + + Sbjct: 232 TPLVSAIGHENDRPLLDEVADLRASTPTDAAKRVVPDVAEELSRVQQARAGMRLRITQRL 291 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L SL L N + L R +E I + + + +++ Sbjct: 292 GNEGDRLESLRTRPVLANPVSLIDSHADELSRYVSRSIELVERAIEKAHAGATELTGQLR 351 Query: 359 SDFLIHNIQK 368 + +Q+ Sbjct: 352 ALSPQRTLQR 361 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 47/130 (36%) Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q ++ R + + + + I + + ++R ++ I Sbjct: 277 QQARAGMRLRITQRLGNEGDRLESLRTRPVLANPVSLIDSHADELSRYVSRSIELVERAI 336 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + H + T L++ + + TL+RGY Q + + + T +++ DG+ + Sbjct: 337 EKAHAGATELTGQLRALSPQRTLQRGYAIAQLPDGTAVRSTSDAPDGTELMLTVADGKIS 396 Query: 496 AIVINKAPPK 505 V + Sbjct: 397 TTVTGQPADT 406 >gi|304382684|ref|ZP_07365178.1| exodeoxyribonuclease VII large subunit [Prevotella marshii DSM 16973] gi|304336309|gb|EFM02551.1| exodeoxyribonuclease VII large subunit [Prevotella marshii DSM 16973] Length = 431 Score = 220 bits (559), Expect = 7e-55, Method: Composition-based stats. Identities = 92/507 (18%), Positives = 173/507 (34%), Gaps = 98/507 (19%) Query: 12 HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63 S+ EL+ +K ++E ++ V E+S R GH Y L KD ++ Sbjct: 2 QKALSLYELNSLVKEVLEISMPEEYWVEAELSEVRENR--GHCYMELIEKDEQSHTAVAK 59 Query: 64 IDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114 A W+ + + G++ L+ + I+ + P+ G Sbjct: 60 ASAKCWRNVWSTLSTHFMRVTGQSLHAGMKLLLRVYPQFHEAYG-FSWIVSDIDPTFTMG 118 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFP 171 + ++ ++L EEG+F + IP K IAVI+S T A D L ++ F Sbjct: 119 DMARKRQEIIRRLKEEGVFDLNKELSIPMFVKHIAVISSSTAAGYGDFLNQLKDNAYGFA 178 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 +F +QG+ I +A+ +N R D++++ RGGG+ DL F+ + Sbjct: 179 FEPQLFDAVMQGEGVEASIISALNAINA-----EADRFDVVVIIRGGGATSDLSGFDTLL 233 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + IAN +P+I+ IGH+ D ++ D + TPT AA + Sbjct: 234 LAENIANFPLPVITGIGHDRDESILDMVSHTSVKTPTAAAAFLI---------------- 277 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 L ++D R + + + + Sbjct: 278 ---------------------------DRLQRVDEQIDECKRVVVRAVTRKMEAERLRLG 310 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 I + I + +V+ + ++IA L Sbjct: 311 RISSNIPM--------------------LFSLVRTREEALLDSLHQRIATLAH------A 344 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 H++ L R+ + H++ + + + + L+RGY+ N Sbjct: 345 YFSANSQHLQTLWLRLLPLAEHRLMHENHRIELLAEKAIALDPSMLLQRGYSMTLH-NGK 403 Query: 472 FITQKRNLATKTRILINFFDGQANAIV 498 + L +I G ++V Sbjct: 404 VVKDAAQLHCGDKIKTRLAKGVIESVV 430 >gi|296118160|ref|ZP_06836741.1| exodeoxyribonuclease VII, large subunit [Corynebacterium ammoniagenes DSM 20306] gi|295968718|gb|EFG81962.1| exodeoxyribonuclease VII, large subunit [Corynebacterium ammoniagenes DSM 20306] Length = 413 Score = 220 bits (559), Expect = 7e-55, Method: Composition-based stats. Identities = 90/370 (24%), Positives = 173/370 (46%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +Q + + V +++ +K +E L + V G+++ + +Y +L+D Sbjct: 1 MAQTVNSPAAPWPVGKVNDQVKGWIEK-LGFLWVEGQLTQINIKSTWKLSYLTLRDIEQQ 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + + ++G +V GK + G + + + G G LL +E Sbjct: 60 KSVQLTCPTDLVRNLPTPLKDGDRVVVYGKPAFYAGRGSFSLWTTDIRHVGIGELLARIE 119 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +K+L EGL K P+PF+PK + +IT A RD+L R+P ++ + Sbjct: 120 ALRKQLTAEGLTDPARKKPLPFLPKKVGLITGRGSAAERDVLAVSQDRWPAVQFRVINTA 179 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG ++ +A+ L+ P D+II+ARGGGS+EDL F++E + RA+A + Sbjct: 180 VQGTGTVAQVVDALQLLDA------DPEIDVIIIARGGGSVEDLLPFSEEALQRAVAAAH 233 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D AD+RA TPT AA+ VP + R+ + + Sbjct: 234 TPVVSAIGHEPDNPVLDNVADVRAATPTDAAKRVVPDVALEYDRIAESRQRMAAALRGWV 293 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L L + + ++ R + RL + + ++++ + R+ + + +++ Sbjct: 294 ERERRGLEQLRSRPVLADPMRAITLQREEVARLQQLMRRDIQVHLERETSRVSALRSQVS 353 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 354 ALGPAATLAR 363 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 48/138 (34%), Gaps = 7/138 (5%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 I E +Q + ++ + ++ + + I + +L + + Sbjct: 277 RIAESRQRMAAALRGWVERERRGLEQLRSR--PVLADPMRAITLQREEVARLQQLMRRDI 334 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ-----DTNNNFITQKRNLATKTRIL 486 ++ + VS + + TL RGY+ +Q ++ +T + ++I Sbjct: 335 QVHLERETSRVSALRSQVSALGPAATLARGYSVVQVLPRDGSDAEVVTSYQQAPPGSQIR 394 Query: 487 INFFDGQANAIVINKAPP 504 + DG + V+ P Sbjct: 395 VRVGDGSLSGAVLGSEPA 412 >gi|238062739|ref|ZP_04607448.1| exodeoxyribonuclease VII large subunit [Micromonospora sp. ATCC 39149] gi|237884550|gb|EEP73378.1| exodeoxyribonuclease VII large subunit [Micromonospora sp. ATCC 39149] Length = 406 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 98/373 (26%), Positives = 159/373 (42%), Gaps = 12/373 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 M+ S + V +S + + + L V V G+++ + + +L+D Sbjct: 1 MSADESGRSSSDEPWPVRVVSQKVGAWI-ARLGWVWVDGQVAQISRRPGASTVFLTLRDP 59 Query: 61 HSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + + + L+ EG ++ K + + + + G G LL Sbjct: 60 SADLSLTVTTNRDVLDAGAPELREGARVVLHAKPEFYAARGTLSLRADEIRQVGLGELLA 119 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 LEK KK L EGLF K +PF+P + +IT A RD+L R+P + Sbjct: 120 RLEKLKKLLAAEGLFDRARKRRLPFLPGRVGLITGRASAAERDVLTNARRRWPAVEFRTV 179 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 V VQG +I +A+ L+ P D+I++ARGGG IEDL F+DE + RA+ Sbjct: 180 NVAVQGPGAVPQIVDALKVLDA------DPTVDVIVIARGGGGIEDLLPFSDEALCRAVF 233 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P++SAIGHETD L DY ADLRA TPT AA+ VP + R+ + Sbjct: 234 ACRTPVVSAIGHETDAPLVDYVADLRASTPTDAAKRIVPDLTEELRLIQQARHRVERAVR 293 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 L+ + N L+ L L + + L + L+ + H + Sbjct: 294 HLVDREANRLDGLRSRPVLARPQVMVEQRVADVTALRQRAGRTLQHRLGAAEDELRHTLA 353 Query: 356 RIKSDFLIHNIQK 368 R+++ +++ Sbjct: 354 RLRALSPAATLER 366 Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 5/156 (3%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--- 406 + +++ ++ + E+ + I+Q + R + + L LR Sbjct: 251 LVDYVADLRASTPTDAAKRIVPDLTEELRLIQQARHRVERAVRHLVDREANRLDGLRSRP 310 Query: 407 --EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 + + + + L R L H++ + + T L++ + TL+RGY Sbjct: 311 VLARPQVMVEQRVADVTALRQRAGRTLQHRLGAAEDELRHTLARLRALSPAATLERGYAI 370 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 +Q + + + + + + +G+ V Sbjct: 371 VQRADGHVVRAAGEVGGGDPLRVRLAEGELAVTVDG 406 >gi|86742559|ref|YP_482959.1| exodeoxyribonuclease VII large subunit [Frankia sp. CcI3] gi|86569421|gb|ABD13230.1| Exodeoxyribonuclease VII large subunit [Frankia sp. CcI3] Length = 416 Score = 219 bits (558), Expect = 7e-55, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 165/366 (45%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65 S V +S L + + L V V G+++G G + +L+D + + Sbjct: 16 TSSPEQPLPVRSVSRALGDWI-NRLGRVWVEGQVTGIVRRPGMGTVFLTLRDPVADVSLR 74 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + + + +G +V GK + PG + + + P G+G LL LE+ K Sbjct: 75 VTCPRAVCDAVGPALVDGARVVVWGKPSFHPGRGTLALAVVEIRPLGAGALLARLEQLKA 134 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K PF+P + +IT A RD+++ R+P +R+++ V VQG Sbjct: 135 TLAAEGLFAASRKRRPPFLPAAVGLITGRASAAERDVVENARRRWPAVRIVLREVAVQGP 194 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ +A+ +L+ E ++I++ARGGGS+EDL F+DE ++RA+ + P++ Sbjct: 195 LAVAQVIDALRELDARAE------VEVIVIARGGGSLEDLLPFSDEALLRAVVAACTPVV 248 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ AD+RA TPT AA+ VP ++ L AR ++ + + Sbjct: 249 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVGEQAIAVAQLRARARRVVEHRLDREE 308 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + + + L + +I R+++ Sbjct: 309 RWLADTRGRPVLATPTRDVDRRADDVSALLARSRRCVRHVIDVTGNDLAATRARMRALSP 368 Query: 363 IHNIQK 368 + + Sbjct: 369 AATLDR 374 Score = 87.9 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 1/132 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q I Q R E+ + + + L+ R Sbjct: 285 QAIAVAQLRARARRVVEHRLDREERWLADTRGRPVLATPTRDVDRRADDVSALLARSRRC 344 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI-QDTNNNFITQKRNLATKTRILINF 489 + H I ++ T +++ + TL RGY + + + + +A + I Sbjct: 345 VRHVIDVTGNDLAATRARMRALSPAATLDRGYAVVQRTVDGAVVRGPAEVAAGDGLAIRV 404 Query: 490 FDGQANAIVINK 501 G A V++ Sbjct: 405 AGGTLRATVVDG 416 >gi|257057118|ref|YP_003134950.1| Exodeoxyribonuclease VII large subunit [Saccharomonospora viridis DSM 43017] gi|256586990|gb|ACU98123.1| Exodeoxyribonuclease VII large subunit [Saccharomonospora viridis DSM 43017] Length = 419 Score = 219 bits (558), Expect = 9e-55, Method: Composition-based stats. Identities = 94/341 (27%), Positives = 155/341 (45%), Gaps = 11/341 (3%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65 S + V ++ + + L V V G+I+ + ++ +L+D + + Sbjct: 13 APSTADNPWPVRTVARKIADWIHR-LGSVWVEGQITQISARPGTQTSFLTLRDPSADVSM 71 Query: 66 -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 L E +G +V + + F G + + + P G G LL +E+ + Sbjct: 72 TVTCSARLLRTCEPPLRDGASVVVHARPSFFLGRGTLSLRADEIRPVGIGELLARIERLR 131 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 K L EGLF+ + K PIPF+PK + +IT A RD+L R+P +R + VQG Sbjct: 132 KLLAAEGLFAPERKRPIPFLPKGVGLITGRASAAERDVLVNARARWPAVRFRVINTAVQG 191 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +I A+ L+ P D+I++ARGGGS+EDL F+DE + RA+A + P+ Sbjct: 192 ASAVPQILQALATLDA------DPDIDVIVIARGGGSVEDLLPFSDETLCRAVAAAGTPV 245 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +SAIGHE D L D AD R TPT A + VP + + L R + + + Sbjct: 246 VSAIGHEPDSPLLDLVADRRCSTPTDAGKTVVPDVAEETARIHQLRDRARRALHGWVDTQ 305 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 L +++ P+ L +R + ++E I+ Sbjct: 306 R-RLLEQIRSRPSLADPLGPIEHRAAEIEAQVERGRRAILT 345 Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 9/157 (5%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 ++ + + + E+ I Q+ + R + + +L +R + Sbjct: 260 LVADRRCSTPTDAGKTVVPDVAEETARIHQLRDRARRALHGWVDTQRRLLEQIRSRPSLA 319 Query: 413 -----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466 I + I+ + R + + ++++ L + TL+RGY +Q Sbjct: 320 DPLGPIEHRAAEIEAQVERGRRAILTTVSHEQSALAAARARLAALGPSATLERGYAVVQY 379 Query: 467 -DTNN--NFITQKRNLATKTRILINFFDGQANAIVIN 500 D + +A T + + DG AI Sbjct: 380 LDAEGEFRVLRSVSEVAEGTPLRVRLADGAVRAIAGE 416 >gi|297242792|ref|ZP_06926730.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis AMD] gi|296889003|gb|EFH27737.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis AMD] Length = 492 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 101/371 (27%), Positives = 168/371 (45%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYR-GIHSSGHAYFSLKDNH 61 P ++ + V+ LS VE + G+I SSG Y +L+D++ Sbjct: 51 PLKAADTTAENPWPVAILSQKFHSAVER-WPAAWIEGQIVEINMRRASSG--YITLRDSN 107 Query: 62 SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + +++ + +G +V GK + +++ + + + G+G L + Sbjct: 108 EEVSISVMGFSNFVQQARELRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 167 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 ++ +KKL EGLF ++K P+P PK I ++ +P D++ ++ R+P+ R + Sbjct: 168 DELRKKLKGEGLFDAENKVPLPEFPKCIGLVCAPQARAEGDVITNVNLRWPVTRFKVVHA 227 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +CP +I AI QL+ P D+II+ARGGGS EDL F+DE +VRA A Sbjct: 228 HVQGVQCPADIIAAIKQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAAC 281 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SAIGHE DWTL D AAD+RA TPT AA+ VP + N + I Sbjct: 282 VTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQTMRMRISAR 341 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + +I + L L +++ + H L ++ + Sbjct: 342 VDNEIRLVEGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASL 401 Query: 358 KSDFLIHNIQK 368 + + + Sbjct: 402 TALSPQSTLNR 412 Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 52/183 (28%), Gaps = 7/183 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ ++ + E+ Q I+ ++ +R + + L Sbjct: 291 HEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQT-MRMRISARVDNEIRLV 349 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + +++ + R+ L + +V L + + ++T Sbjct: 350 EGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQST 409 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 L RGY +Q + + + + G V + Sbjct: 410 LNRGYAVVQLSGGRVLDDAALAKVGDDMTVTLKSGVVLGKVTGTKSTGTKVAAGKSAGVQ 469 Query: 518 KRE 520 K E Sbjct: 470 KSE 472 >gi|283782921|ref|YP_003373675.1| exodeoxyribonuclease VII, large subunit [Gardnerella vaginalis 409-05] gi|283441706|gb|ADB14172.1| exodeoxyribonuclease VII, large subunit [Gardnerella vaginalis 409-05] Length = 491 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 100/371 (26%), Positives = 168/371 (45%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYR-GIHSSGHAYFSLKDNH 61 P ++ + V+ LS VE + G+I SSG Y +L+D++ Sbjct: 71 PLKAADTTAENPWPVAVLSQKFHSAVER-WPAAWIEGQIVEINMRRASSG--YITLRDSN 127 Query: 62 SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + +++ + +G +V GK + +++ + + + G+G L + Sbjct: 128 EEVSISVMGFSNFVQQARELRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 187 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 ++ +KKL EGLF ++K P+P PK + ++ +P D++ ++ R+P+ R + Sbjct: 188 DELRKKLKGEGLFDAENKVPLPEFPKCVGLVCAPQARAEGDVITNVNLRWPVTRFKVIHA 247 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +CP +I AI QL+ P D+II+ARGGGS EDL F+DE +VRA A Sbjct: 248 HVQGVQCPADIIAAIKQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAAC 301 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SAIGHE DWTL D AAD+RA TPT AA+ VP + N + I Sbjct: 302 VTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQTMRMRISAR 361 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + +I + L L +++ + H L ++ + Sbjct: 362 VDNEIRLVEGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASL 421 Query: 358 KSDFLIHNIQK 368 + + + Sbjct: 422 TALSPQSTLNR 432 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 17/182 (9%), Positives = 52/182 (28%), Gaps = 7/182 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ ++ + E+ Q I+ ++ +R + + L Sbjct: 311 HEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQT-MRMRISARVDNEIRLV 369 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + +++ + R+ L + +V L + + ++T Sbjct: 370 EGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQST 429 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 L RGY +Q + + + + G V + + Sbjct: 430 LNRGYAVVQLSGGRVLDDAALAKVGDDMTVTLKSGVVLGKVTGTKSAVTKSAFIKPSKKS 489 Query: 518 KR 519 + Sbjct: 490 SK 491 >gi|227504070|ref|ZP_03934119.1| exodeoxyribonuclease VII large subunit [Corynebacterium striatum ATCC 6940] gi|227199336|gb|EEI79384.1| exodeoxyribonuclease VII large subunit [Corynebacterium striatum ATCC 6940] Length = 419 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 89/370 (24%), Positives = 175/370 (47%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +Q + + V +++ +K +E L + V G+++ S +Y +L+D Sbjct: 7 VNQPANSPETPWPVGKVNDQVKGWIER-LGFLWVEGQLTQVNVKRSWKLSYLTLRDVEQE 65 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + K+ ++G +V GK + G + + + G G LL +E Sbjct: 66 KSVQLTCPTDMVLKMPTPLKDGDRVVVYGKPAFYAGRGSFSLWTTEIRHVGVGDLLARIE 125 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +++L +EGLF K P+P++P + +IT A RD+L R+P ++ + Sbjct: 126 MLRQQLAKEGLFDPSRKLPLPYLPHKVGLITGRGSAAERDVLAVAKDRWPAVQFRVINTA 185 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG ++ +A+ L+ P D+II+ARGGGS+EDL F++E + RA+A++ Sbjct: 186 VQGANTVPQVIDALQTLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVASAQ 239 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP + + +R+ + + Sbjct: 240 TPVVSAIGHEPDNPVLDNIADLRAATPTDAAKRVVPSVAEEYALIDEARSRMAAALRGWV 299 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L ++ L + ++ R L+R + ++ ++ ++ + ++ Sbjct: 300 ERERRGLENIRSRPVLADPMTPINARREELERSRALINRDIRYLLDKETNRIAALRAQVS 359 Query: 359 SDFLIHNIQK 368 + +++ Sbjct: 360 ALGPSATLER 369 Score = 77.1 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 16/151 (10%), Positives = 50/151 (33%), Gaps = 10/151 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E+ I++ + + + + L +R + Sbjct: 259 ADLRAATPTDAAKRVVPSVAEEYALIDEARSRMAAALRGWVERERRGLENIRSRPVLADP 318 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI---- 465 I +++ I + + + ++ + + TL+RGY+ + Sbjct: 319 MTPINARREELERSRALINRDIRYLLDKETNRIAALRAQVSALGPSATLERGYSIVQVVP 378 Query: 466 QDTNN-NFITQKRNLATKTRILINFFDGQAN 495 +D + +T +++ I DG Sbjct: 379 RDGSGPEVVTSYEQSPPGSQLRIRVGDGSIT 409 >gi|310658651|ref|YP_003936372.1| exodeoxyribonuclease 7 large subunit [Clostridium sticklandii DSM 519] gi|308825429|emb|CBH21467.1| Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) [Clostridium sticklandii] Length = 403 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 110/364 (30%), Positives = 192/364 (52%), Gaps = 16/364 (4%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + SV+EL+ ++ I+ SN L + V GE+ + G+ +FSLKD +S+I+ I Sbjct: 1 MKIKTLSVTELNNYISKIINSNPLLHNFSVSGEVFNLKQTQY-GYIFFSLKDENSKINCI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 + + +G + +V GK+ + + Y II++ G G EK KK L Sbjct: 60 YFSEN----KVTISDGDKLVVEGKLNIYEKNGTYSIIVKKFNSIGLGDSYLEFEKIKKAL 115 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDEC 186 EEG F +K P+P P+ I ++TS +GA I+DI++ R+P + ++I+ K+QG E Sbjct: 116 EEEGYFDKSNKKPLPKHPQKIGIVTSISGAAIKDIIKLAQKRYPIIEIVIYNAKMQGQEA 175 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 I I LN ++IIL RGGGS ++L FN+EMI ++I S PIISA Sbjct: 176 VINIVEGINMLN------NIEDIELIILTRGGGSYDELSIFNNEMIAKSIFESKKPIISA 229 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHE D+ ++D+ AD RA TP+ A E +P H+++ ++ L+ +++ + R +++ Sbjct: 230 IGHEIDFVISDFVADARASTPSSAIENFLPDINHIETYIMQLKEKIDYSLNRKLEFHKIN 289 Query: 307 LNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L +++ L N L+ +R + + L++++ + ++ +++ S I Sbjct: 290 LGNIVSILEKSNFSYKLANNRKDIFNMKIRLDYSIYKSVNKEKNSIEKFGDKLSSLNPIE 349 Query: 365 NIQK 368 I K Sbjct: 350 IINK 353 Score = 77.1 bits (188), Expect = 7e-12, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 3/142 (2%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEF 429 HI +++ + L K + + + E ++ I + R+++ Sbjct: 263 HIETYIMQLKEKIDYSLNRKLEFHKINLGNIVSILEKSNFSYKLANNRKDIFNMKIRLDY 322 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + + S+ L S + +GY I D + IT ++ + I Sbjct: 323 SIYKSVNKEKNSIEKFGDKLSSLNPIEIINKGYAII-DKDKAIITTINQISVDDIVNIKL 381 Query: 490 FDGQANAIVINKAPPKEQPTKK 511 DG A A +I+ + KK Sbjct: 382 SDGIATAKIISVRNEDRKNEKK 403 >gi|317495195|ref|ZP_07953565.1| exodeoxyribonuclease VII [Gemella moribillum M424] gi|316914617|gb|EFV36093.1| exodeoxyribonuclease VII [Gemella moribillum M424] Length = 419 Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats. Identities = 117/373 (31%), Positives = 204/373 (54%), Gaps = 20/373 (5%) Query: 15 YSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ ++ K +++ LS + ++GEIS + +H++ + YFS+KD ++RI+A+ + Sbjct: 7 LTVTALNKYIEKKFLLDPYLSEIYIKGEISNLK-LHNNNNMYFSIKDENTRINAVWFG-- 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 +EF ++G L+ K+ + +Y +++ + G L + K+KL +EGL Sbjct: 64 AKNLEF--KDGDTVLIKSKVNFYYPRGEYNLLVMDIRKDRIGELYQKFLELKEKLEKEGL 121 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F+ Q+K IP + I VIT+ TGA I+DI + I RFP+ + ++ VQG+ ++I Sbjct: 122 FAPQYKKSIPKFSQNIGVITAQTGAAIQDITRTIQRRFPIANINVYSTLVQGEASVQDIV 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + D+IIL RGGG+IEDLW FN E ++RAI N PI++ IGHET Sbjct: 182 KNIKLADE-------DNNDVIILGRGGGTIEDLWSFNTEEVIRAIFNCKTPIVTGIGHET 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ +D RA TPT AAE+ P E +++ L + +L N I +I+ N + + + Sbjct: 235 DTTLADFVSDKRASTPTAAAELVTPNIEDIKNRLNFNKDKLYNRINFIIQGYKNRVQNSI 294 Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + N D R ++ R+L +E + K + ++ +IK+ + + K+ Sbjct: 295 ENPYFKNYDNIYVEYRKKILLFERDLSRVIESNLRDKKLNLSYTCEKIKNIDV---LVKH 351 Query: 370 RQHILEKQQHIEQ 382 ++ K + +E Sbjct: 352 KEKFSRKVERLEA 364 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 4/126 (3%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITRIEFILSHKI 435 Q IE ++ I++E ++KI + + ++ + ++ +I+ I + Sbjct: 291 QNSIENPYFKNYDNIYVEYRKKILLFERDLSRVIESNLRDKKLNLSYTCEKIKNI--DVL 348 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 S L++ + N LK+GY+ N + + K + I DG Sbjct: 349 VKHKEKFSRKVERLEANSPLNILKKGYSITFSDNKKIV-SIHEVNRKDNLSIRLIDGIVE 407 Query: 496 AIVINK 501 V + Sbjct: 408 CEVTDI 413 >gi|170782741|ref|YP_001711075.1| exodeoxyribonuclease VII large subunit [Clavibacter michiganensis subsp. sepedonicus] gi|189037851|sp|B0RH22|EX7L_CLAMS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|169157311|emb|CAQ02498.1| putative exoribonuclease large subunit [Clavibacter michiganensis subsp. sepedonicus] Length = 438 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 106/423 (25%), Positives = 175/423 (41%), Gaps = 15/423 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + ++D P + VS LS +K ++ L V GEI+ + G S G+ Y LKD Sbjct: 10 PAADAPTVDAP-WPVSVLSGKIKGWIDR-LGTAWVEGEITQWGG--SGGNVYGKLKDLDV 65 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + I +W KI +G + + K + + + + G G LL L Sbjct: 66 DATISFTVWSSVRAKIPADLGQGARVVALVKPNYWVKGGTLTMQVLEMRHVGLGDLLERL 125 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L EGLF K +PF+P I +IT +D+L+ +P +R + Sbjct: 126 ERLRQTLRAEGLFDADRKRRLPFLPGCIGLITGKDSDAEKDVLRNAQLHWPSVRFRVVHT 185 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQGD E+ AI L P D+I++ARGGG ++L F+DE +VR A Sbjct: 186 AVQGDRAAGEVTRAIGVL------DEDPEVDVIVIARGGGDFQNLLVFSDEKLVRTAAAC 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D L D ADLRA TPT AA+ VP S + AR+ + Sbjct: 240 RTPLVSAIGHEADRPLLDDVADLRASTPTDAAKRVVPDVSEELSRVQQARARIGMRLTSQ 299 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ +I+ + L L ++ + L R ++ R + + + ++ Sbjct: 300 VRGEIDRIEQLRSRPVLASTSWIVDSRAEELGRYIARSAELAGRVVERGMQQTSELSRQL 359 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 ++ H + + + + L + L + I Sbjct: 360 RTLSPQHVLDRGYAIVQTADGSALRAPADAPDGTGLVLRLAAGALGATSTGPTDDIPSSA 419 Query: 418 THI 420 + Sbjct: 420 ARL 422 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 45/149 (30%) Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q ++ + + + + T + + + I R + + Sbjct: 286 QQARARIGMRLTSQVRGEIDRIEQLRSRPVLASTSWIVDSRAEELGRYIARSAELAGRVV 345 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + S +R L++ + ++ L RGY +Q + + + + T +++ G Sbjct: 346 ERGMQQTSELSRQLRTLSPQHVLDRGYAIVQTADGSALRAPADAPDGTGLVLRLAAGALG 405 Query: 496 AIVINKAPPKEQPTKKCQLHNNKREKQGT 524 A + + + Sbjct: 406 ATSTGPTDDIPSSAARLPASPAPDARPAS 434 >gi|311898161|dbj|BAJ30569.1| putative exodeoxyribonuclease 7 large subunit [Kitasatospora setae KM-6054] Length = 408 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 90/301 (29%), Positives = 148/301 (49%), Gaps = 10/301 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSR 63 S V ++S + V+ L V V G+I+ +G + +L+D Sbjct: 2 ANTSSPEAPLPVGKVSALIGGWVDR-LGEVWVEGQIAQLNRRPGAGMVFLTLRDPERDVS 60 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + ++ ++ +EG +V K + + L G G LL LE+ Sbjct: 61 LTVTCFRQVFEQVADAVQEGARVIVRAKPEWYTARGTLSLRAAELRLVGLGELLARLEQL 120 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K++L EGLF D K P+PF+P + ++T A RD+L+ R+P +R + V VQ Sbjct: 121 KRRLFAEGLFEDARKKPLPFLPGCVGLVTGRGSAAERDVLENARRRWPAVRFEVRNVLVQ 180 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + ++ A+ +L+ L P ++I++ARGGGS+EDL F+DE +VR +A + P Sbjct: 181 GPQSVGQVCAAVRELDAL------PEVEVIVVARGGGSVEDLLPFSDEELVRTVAAARTP 234 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D L D+ AD RA TPT AA+ VP + + L R ++ ++ Sbjct: 235 VVSAIGHEPDQPLLDFVADFRASTPTDAAKRVVPDVGEELARVRQLRDRARRHVLNRVER 294 Query: 303 K 303 + Sbjct: 295 E 295 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 51/153 (33%), Gaps = 5/153 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 ++ ++ + E+ + Q+ + R++ + + A L +R + Sbjct: 252 ADFRASTPTDAAKRVVPDVGEELARVRQLRDRARRHVLNRVERESAGLASVRSRPVLAAP 311 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + + L+ R +L ++ + + + + + TL+RGY +Q + Sbjct: 312 AEALAARGAEVDALLDRARRVLGLRLDHAQSDLGHALARVVALSPLATLERGYAVLQKAD 371 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 +T A + G V A Sbjct: 372 GTVLTDPARAADGEALRARVAGGSFGVRVDGGA 404 >gi|118580288|ref|YP_901538.1| exodeoxyribonuclease VII [Pelobacter propionicus DSM 2379] gi|118502998|gb|ABK99480.1| Exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM 2379] Length = 530 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 102/530 (19%), Positives = 202/530 (38%), Gaps = 49/530 (9%) Query: 15 YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAI 67 + +S ++ + +++ + V+ E+ G G Y L + + +I Sbjct: 11 FPLSSITTRISELLQPAITKRFWVKAEV--MSGRERGGAFYCDLIETGANGKIAAKISCT 68 Query: 68 IWKGTLNKIE--FLPEEGIEFLVIGKI-----TT-FPGSSKYQIIIESLIPSG-SGTLLT 118 IW L I F + L G + + + + + PS G + Sbjct: 69 IWSQELTSIRNLFKSKGMDLVLTDGTVVGFQCSLQYSPQYGISLRVIDADPSFALGEMEL 128 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIF 177 + ++L EGLF + +P +P+ I +I+S A D +Q ++ F ++ + Sbjct: 129 KKREIIERLQREGLFQPNKECFVPLLPQNIGLISSFGSAAYNDFIQTLTTSMFGFKIHMA 188 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 +QG++ K + A+ L L ++I++ARGGGS DL+ ++E + R IA Sbjct: 189 DAMMQGEQTEKSVLRAMDALCKL-------GVELIVIARGGGSKTDLYFLDNEAVARKIA 241 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 +IP+ + IGHE D ++ DY A+ TPT AE V +Q L L + Sbjct: 242 ACTIPVWTGIGHEIDTSVLDYVANKSFKTPTAVAEELVARFIQMQRQLEEASNTLQTVWA 301 Query: 298 RLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 K L+ + + + L + L ++L H + + ++ ++ Sbjct: 302 YRFKIDREYLDRAIIGIHQGPRKLLEVTVSNLREQAQDLRHLVSERLSTEHIQLESKRSQ 361 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF-- 414 +KS + IQK + + K+Q+I VK L R + ++ Sbjct: 362 LKS-LPLAVIQKQIERLSSKKQNIGTQVKFALSGWTGTMSRLKGRFDKNRYIKRLQVESD 420 Query: 415 YLHTHIKKLITRIEFILS-------------------HKIKSCHTSVSITTRILQSFAYK 455 ++L++R + +I S++ +++ + Sbjct: 421 AHDKSSQQLLSRFTAAVKLLTMQQWNRKERFRVEKVKQRIMVERKSLNDKMATIRATDPQ 480 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 N L+RG+ + + I ++ I + DG + V+ K Sbjct: 481 NALQRGFALVYRQDGQLIRSIHDINKSDTIRTHVVDGTVISEVVAKEAKA 530 >gi|302530084|ref|ZP_07282426.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. AA4] gi|302438979|gb|EFL10795.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. AA4] Length = 421 Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats. Identities = 91/372 (24%), Positives = 165/372 (44%), Gaps = 16/372 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + + + V ++ + + L V V G+++ + A+ +L+D + Sbjct: 2 SNDPATSAENPWPVRTVARKIGDWIHR-LGDVWVEGQVTQMNARPGTQTAFLTLRDPSAD 60 Query: 64 ID----AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +W + ++ EG ++ K + F G + + + G G LL Sbjct: 61 VSMSVTCPMW--LVRELPTPLREGDRVVIHAKPSFFFGRGTLSLRADQIRAVGIGELLAR 118 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ +K L EG+F+ + K PIPF+PK I +IT A RD+L R+P + + Sbjct: 119 IERLRKLLAAEGMFARERKRPIPFLPKGIGLITGRASAAERDVLANAQARWPHVLFKVLN 178 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG + +I A+ L+ P D+I++ARGGGS+EDL F+DE + RA+A Sbjct: 179 TAVQGSQAVPQILRALSILDK------DPDVDVIVIARGGGSVEDLLPFSDEALCRAVAA 232 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + PI+SAIGHE D L D+ ADLR TPT A++ VP + + + R + Sbjct: 233 AGTPIVSAIGHEPDTPLLDHVADLRCSTPTDASKRIVPDVREETARVRQMRDRGRRALHG 292 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + L L L + + ++R + ++ + + R Sbjct: 293 WVDRETRLLTQLRSRPSLADPLGPIERRLSDVERHRERGRRAMLSLLAKDQAEVANARGR 352 Query: 357 IKSDFLIHNIQK 368 + + +++ Sbjct: 353 LAALGPAATMER 364 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 55/168 (32%), Gaps = 9/168 (5%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-- 412 ++ ++ + E+ + Q+ + R + + +L LR + Sbjct: 254 ADLRCSTPTDASKRIVPDVREETARVRQMRDRGRRALHGWVDRETRLLTQLRSRPSLADP 313 Query: 413 ---IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 I + +++ R + + V+ L + T++RGY +Q D Sbjct: 314 LGPIERRLSDVERHRERGRRAMLSLLAKDQAEVANARGRLAALGPAATMERGYAVVQFTD 373 Query: 468 TNN--NFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 + + + + ++ + DG +A+ + P P Sbjct: 374 SAGNLHVLRSVSQIEDGAQLRVRVADGAVHAVAESVEPTTPVPEGDRP 421 >gi|227832770|ref|YP_002834477.1| exodeoxyribonuclease large subunit [Corynebacterium aurimucosum ATCC 700975] gi|227453786|gb|ACP32539.1| exodeoxyribonuclease large subunit [Corynebacterium aurimucosum ATCC 700975] Length = 441 Score = 218 bits (556), Expect = 2e-54, Method: Composition-based stats. Identities = 91/370 (24%), Positives = 169/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +Q + + V +++ +K +E L + V G+I+ + +Y +L+D Sbjct: 29 VNQPANSAETPWPVGKVNDQVKGWIER-LGFLWVEGQITQLNMKPTWKLSYITLRDVEQE 87 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + ++G +V GK + G + + + + G G LL +E Sbjct: 88 KSVQLTCNTSLIRNAPSPLKDGDRVVVYGKPAFYAGRGSFSLWVTEIRHVGIGDLLARVE 147 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 ++KL +EGL K P+P++PK I +IT RD+L R+P ++ + Sbjct: 148 MLRQKLRQEGLCDPSRKLPLPYLPKKIGLITGRGSHAERDVLSVAQDRWPAVQFNVINTA 207 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG ++ +A+ L+ P D+II+ARGGGS+EDL F++E + RA+A + Sbjct: 208 VQGATAVTQVIDALRTLDA------DPEVDVIIIARGGGSVEDLLPFSEEALQRAVAEAR 261 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D ADLRA TPT AA+ VP + + +R+ + + Sbjct: 262 TPVVSAIGHEPDHPVLDDVADLRAATPTDAAKRVVPSASKEYALISEARSRMAAALRGWV 321 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L ++ L + ++ R L+R + + + R+ + R+ Sbjct: 322 DRERRGLENIRSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVS 381 Query: 359 SDFLIHNIQK 368 + +++ Sbjct: 382 ALGPSATLER 391 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 35/100 (35%), Gaps = 5/100 (5%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + I +++ + I ++SH++ V+ + + TL+R Sbjct: 332 RSRPVLADPMVPINARREELERNLALIRRVMSHQLDRETNQVASLRARVSALGPSATLER 391 Query: 461 GYTSI----QDTNN-NFITQKRNLATKTRILINFFDGQAN 495 GY + +D + +T +++ I DG Sbjct: 392 GYAIVQVLPRDGSGPEVVTSYTQSPPGSQLRIRVGDGSIT 431 >gi|289640708|ref|ZP_06472880.1| exodeoxyribonuclease VII, large subunit [Frankia symbiont of Datisca glomerata] gi|289509597|gb|EFD30524.1| exodeoxyribonuclease VII, large subunit [Frankia symbiont of Datisca glomerata] Length = 416 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 94/366 (25%), Positives = 164/366 (44%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65 S V ++ + + + L V V G+++ + +L+D + + Sbjct: 4 TSTPEQPLPVRTVARAIGDWI-NRLGRVWVEGQLTEIVRRPGLATVFLTLRDPVADVSLR 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + + + +G +V GK + P + + + P G+G LL LE+ + Sbjct: 63 LTCPRAVCDAVGSALTDGARVVVQGKPSFHPARGTLALAVTEIRPIGTGILLARLEQLRG 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K PF+P+ + +IT A RD++ R+P +R++ V VQG Sbjct: 123 MLAAEGLFAASRKRRPPFLPRAVGLITGRASAAERDVVMNARRRWPAVRIVSREVAVQGP 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +I +A L+E P D+I++ARGGGS+EDL F+DE +VRA+A ++ P++ Sbjct: 183 LAVGQIIDA------LRELDGVPEVDVIVIARGGGSLEDLLPFSDEALVRAVAAATTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ AD+RA TPT AA+ VP + + L R + + + + Sbjct: 237 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVAEQLALVTTLRGRARRSVEQRLDREE 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L L + L + L + + R + H + ++ + Sbjct: 297 RWLADLRGRPALAAPGRELDRHDEYVRALRSRGRRCVLHQLERADQELAHALAQLHALSP 356 Query: 363 IHNIQK 368 + + Sbjct: 357 AATLDR 362 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 44/145 (30%), Gaps = 3/145 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + + + V+Q L + + +++ L + Sbjct: 270 VAEQLALVTTLRGRARRSVEQRLDREERWLADLRGR--PALAAPGRELDRHDEYVRALRS 327 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTR 484 R + H+++ ++ L + + TL RGY ++ + + + Sbjct: 328 RGRRCVLHQLERADQELAHALAQLHALSPAATLDRGYALVRRVADGSIVRDPAQATPGDA 387 Query: 485 ILINFFDGQANAIVINKAPPKEQPT 509 + + G A V + T Sbjct: 388 LTVRVAGGSFPATVDSPPAGARTQT 412 >gi|330465789|ref|YP_004403532.1| exodeoxyribonuclease vii, large subunit [Verrucosispora maris AB-18-032] gi|328808760|gb|AEB42932.1| exodeoxyribonuclease vii, large subunit [Verrucosispora maris AB-18-032] Length = 407 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 12/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--A 66 S + V +S + V + L V V G+++ + + +L+D + + Sbjct: 9 SSSEEPWPVRVVSQKIAAWV-ARLGWVWVDGQVAQISRRPGASTVFLTLRDPSAELSLTV 67 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + L+ EG +V K + + + + G G LL LEK KK Sbjct: 68 TTDRDVLDSGAPELREGARIVVHAKPEFYAARGTLSLRADEIRQVGLGELLARLEKLKKL 127 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF K PF+P+ + +IT A RD+L R+P + V VQG Sbjct: 128 LAAEGLFDRARKRRPPFLPQRVGLITGRASAAERDVLTNARRRWPAVEFRTVNVAVQGPG 187 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +I +A+ L + P D+IILARGGG IEDL F+DE + RA+ P++S Sbjct: 188 AVPQIIDALKVL------DSDPSVDVIILARGGGGIEDLLPFSDEALCRAVFACRTPVVS 241 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHETD L DY AD+RA TPT AA+ VP + RL+ + L+ + + Sbjct: 242 AIGHETDAPLVDYVADIRASTPTDAAKRVVPDLAEEIRLINQARHRLHRAVHNLVDRETH 301 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 +++L L + L L + E NL + H + R+++ Sbjct: 302 RIDALRSRPVLARPQVMVEQRAADLAALRQRAERNLRHRLAAADDDLRHTLARLRALSPA 361 Query: 364 HNIQK 368 + + Sbjct: 362 ATLDR 366 Score = 110 bits (276), Expect = 4e-22, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 2/135 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + I + + + + V + + + + + + + L Sbjct: 274 LAEEIRLINQARHRLHRAVHNLVDR--ETHRIDALRSRPVLARPQVMVEQRAADLAALRQ 331 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R E L H++ + + T L++ + TL RGY +Q + + + +A + Sbjct: 332 RAERNLRHRLAAADDDLRHTLARLRALSPAATLDRGYAIVQRADGHVVRAADEVAKGDAL 391 Query: 486 LINFFDGQANAIVIN 500 + DG V Sbjct: 392 RVRLADGDLAVTVTG 406 >gi|148273413|ref|YP_001222974.1| exodeoxyribonuclease VII large subunit [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166232351|sp|A5CT74|EX7L_CLAM3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|147831343|emb|CAN02299.1| xseA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 438 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 15/371 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + ++D P + VS LS +K ++ L V GEI+ + G S G+ Y LKD Sbjct: 10 PAADAPTVDAP-WPVSVLSGKIKGWIDR-LGTAWVEGEITQWGG--SGGNVYGKLKDLDV 65 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + I +W KI +G + + K + + + + G G LL L Sbjct: 66 DATISFTVWSSVRAKIPADLGQGARVVALVKPNYWVKGGTLTMQVLEMRHVGLGDLLERL 125 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L EGLF K +PF+P I +IT +D+L+ R+P +R + Sbjct: 126 ERLRQTLRAEGLFDADRKRRLPFLPGCIGLITGKDSDAEKDVLRNAQLRWPSVRFRVVHT 185 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQGD E+ AI L P D+I++ARGGG ++L F+DE +VR A Sbjct: 186 AVQGDRAAGEVTRAIGVL------DEDPEVDVIVIARGGGDFQNLLVFSDEKLVRTAAAC 239 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D L D ADLRA TPT AA+ VP S + AR+ + Sbjct: 240 RTPLVSAIGHEADRPLLDDVADLRASTPTDAAKRVVPDVSEELSRVQQARARIGMRLTSQ 299 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ +I+ + L L ++ + L R ++ R + + + ++ Sbjct: 300 VRGEIDRIEQLRSRPVLSSTAWIVDSRAEELGRYIARSAELAGRVVERGMQQTSELSRQL 359 Query: 358 KSDFLIHNIQK 368 ++ H + + Sbjct: 360 RTLSPQHVLDR 370 Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 12/107 (11%), Positives = 36/107 (33%) Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q ++ + + + + T + + + I R + + Sbjct: 286 QQARARIGMRLTSQVRGEIDRIEQLRSRPVLSSTAWIVDSRAEELGRYIARSAELAGRVV 345 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + S +R L++ + ++ L RGY +Q + + + + Sbjct: 346 ERGMQQTSELSRQLRTLSPQHVLDRGYAIVQTADGSALRAPADAPDG 392 >gi|303237763|ref|ZP_07324322.1| exodeoxyribonuclease VII, large subunit [Prevotella disiens FB035-09AN] gi|302482049|gb|EFL45085.1| exodeoxyribonuclease VII, large subunit [Prevotella disiens FB035-09AN] Length = 445 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 93/504 (18%), Positives = 182/504 (36%), Gaps = 96/504 (19%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDA 66 ++ EL+ + +++ + V+ E+S S GH + L + +R A Sbjct: 19 LTLYELNSMVAELIDRAMPQSYWVQAEVSE--ARESGGHLFLELIEKQERTNTPIARASA 76 Query: 67 IIWKGTLNKI--EFLPEEGIEFLVIGKITT-----FPGSSKYQIIIESLIPSG-SGTLLT 118 W+ I F + G++ ++ F + I++ + P G + Sbjct: 77 KCWRSQWALIGANFERKTGVKVRAGLQLMVQVHAQFHPQYGFSWIVDDINPEFTMGDMAR 136 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175 ++ +L EG+F Q + IP K IAV++S + A D ++ F V Sbjct: 137 KRQEIINQLKAEGVFDLQKELNIPLFAKRIAVVSSASAAGYGDFCNQLEHNEYGFCFEVE 196 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 +F +QG+ K I A+ +N + D +++ RGGG+ DL F+ + Sbjct: 197 LFAAAMQGELVEKSIIEALNLINEREVD-----FDCVVIIRGGGATADLSGFDTLALAEN 251 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +AN +PII+ IGHE D ++ D A+ R TPT AA + Sbjct: 252 VANFPLPIITGIGHERDESILDMVANTRVKTPTAAAAFLIEH------------------ 293 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 L+ + YR+++ ++ +E + + H + Sbjct: 294 -------------------------LANTLYRIEQAQMKIHRAVERKLQEEKLHLQRLST 328 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 I F + NR++ LH + ++ + Sbjct: 329 HIPVLF---AMVHNREN-----------------------ARLDDYLHAIIQRIGLHLQR 362 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 +I L +++ + KI + + ++ + S + L+ GY+ N + + Sbjct: 363 NRMNIATLSEKLQPNVERKITHERHRLQLLSQRIDSVNPERLLRLGYSLTY-KNGHIVRN 421 Query: 476 KRNLATKTRILINFFDGQANAIVI 499 L+ I+ G +IV Sbjct: 422 ANELSKGDEIVTRMEMGSVKSIVK 445 >gi|284989584|ref|YP_003408138.1| exodeoxyribonuclease VII large subunit [Geodermatophilus obscurus DSM 43160] gi|284062829|gb|ADB73767.1| exodeoxyribonuclease VII, large subunit [Geodermatophilus obscurus DSM 43160] Length = 406 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 13/367 (3%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RI 64 S + V ++ + + L V V G+++ + +L+D + + Sbjct: 3 SPSTPEAPWPVRTVARKVAEWI-GRLGEVWVEGQVAQL-SRRGGATVFLTLRDPAADLSV 60 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 + + EG +V + + + + + G G LL +E+ + Sbjct: 61 PVTCSRDVAGRPGLELTEGARVIVRARPDYYIARGSFSLRATEIRAVGLGELLARIERIR 120 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 + L EGLF K P+PF P ++ V+T A RD+L R+P +R + VQG Sbjct: 121 RLLAAEGLFDAARKRPLPFAPAVVGVVTGRDSAAERDVLVTARRRWPAVRFAVHHSLVQG 180 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + + +L+ P ++I++ARGGGS+EDL F+DE +VRAIA P+ Sbjct: 181 PSAASSVIEGLQRLDR------DPEVEVIVVARGGGSVEDLLPFSDEGLVRAIAACRTPV 234 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ++A+GHETD TL D+AAD+RA TPT AA VP + + L AR +++ ++ + Sbjct: 235 VTAVGHETDTTLVDHAADVRAATPTDAAHRVVPEIGEQRRLVDGLRARARHLVGARLEQQ 294 Query: 304 INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L S+ L + + L +++L +L + R H R+ + Sbjct: 295 ERWLESVRSRPVLADPQRLLHGRADDVEQLRTRARRSLTHRLEGAERDLEHARARVAALS 354 Query: 362 LIHNIQK 368 +++ Sbjct: 355 PAATLER 361 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 50/133 (37%), Gaps = 2/133 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + R+ + + +V L + + + + + +++L T Sbjct: 269 IGEQRRLVDGLRARARHLVGARLEQQERWLESVRSR--PVLADPQRLLHGRADDVEQLRT 326 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R L+H+++ + + + + TL+RGY +Q + + + + +A R+ Sbjct: 327 RARRSLTHRLEGAERDLEHARARVAALSPAATLERGYAVVQRADGSLVREPGEVADDERL 386 Query: 486 LINFFDGQANAIV 498 + G+ V Sbjct: 387 SVRVAGGRLPVRV 399 >gi|144897277|emb|CAM74141.1| exodeoxyribonuclease VII, large subunit [Magnetospirillum gryphiswaldense MSR-1] Length = 260 Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats. Identities = 100/207 (48%), Positives = 138/207 (66%), Gaps = 3/207 (1%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 MN + + + PE+SV+ELS LK VE +HV VRGEISG++ HSSGH YF+LKD Sbjct: 5 MNE--PRPASNVPEFSVAELSGALKRTVEETFAHVRVRGEISGFK-RHSSGHLYFALKDA 61 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + +DA+ W+G K+ PE+G+E + G++TT+PG SKYQ+++E + +G G LL L Sbjct: 62 EAVLDAVCWRGQAAKLGINPEDGMEVIATGRLTTYPGRSKYQMVVERMELAGQGALLKLL 121 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVK 180 E R++KL EGLF K PIPF+P+II ++TSPTGAVIRDIL R++ RFP RV+++PV Sbjct: 122 EDRRRKLAAEGLFDQGRKRPIPFLPEIIGIVTSPTGAVIRDILHRLADRFPRRVLLWPVA 181 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCP 207 VQG+ A +L L R P Sbjct: 182 VQGERRRPTGGFAPRRLQHLAGQRRAP 208 >gi|148241467|ref|YP_001226624.1| exonuclease VII large subunit [Synechococcus sp. RCC307] gi|147849777|emb|CAK27271.1| Exonuclease VII large subunit [Synechococcus sp. RCC307] Length = 384 Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 176/404 (43%), Gaps = 28/404 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 ++ P YSVSEL+ + ++E V G + + + GH +FSL D + I A+ Sbjct: 1 MELPAYSVSELNEAIGVLLERGFAPRFLVDGAV--VKPVLKKGHLWFSLSDGDASIQAVA 58 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 W T+ ++ F P +G V+GK+ + + + + PS T+L E+ K++L Sbjct: 59 WASTVARLSFRPNDGDGVRVVGKLNFWGARASLSVQALDIRPS-LSTVLRRFEQVKQQLE 117 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 EGL + +P P IA++TS + + D+L+ R+P + + P+ VQGD Sbjct: 118 SEGLLDPALRRQLPQRPSCIAILTSVPSSALADLLRTAKQRWPACNLRVVPIPVQGDVEK 177 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + A + L+ + ++LARGGGS EDL F+ E + RA+ +P++S I Sbjct: 178 RICAV----FDQLETQWQRLGIEAVVLARGGGSREDLSVFDGEDLARALLRCPVPVVSGI 233 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHE D T+AD AAD RA TPT A +P ++ Q L + I ++ + Sbjct: 234 GHEDDVTIADLAADYRAATPTAAMVALLPDRQQEQQLLEQRGRHWRSSIQNRLEQE---- 289 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L D L + R L+ + R+ + + + +Q Sbjct: 290 ------LRQWDPELRQDQRRA---------LLQRNLERRQWQLHSQRQLLAALSPQRLLQ 334 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + + + + + +E + +L + + + Sbjct: 335 RGYCLLRSSEGQLLRNGSTLSAGDAVEAQLHQGVLSLTVQTWQP 378 Score = 80.2 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 37/103 (35%), Gaps = 2/103 (1%) Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 ++ + + + +++ R +L ++ + ++L + + + L+RGY Sbjct: 282 IQNRLEQELRQWDPELRQDQRR--ALLQRNLERRQWQLHSQRQLLAALSPQRLLQRGYCL 339 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 ++ + + L+ + G + V P + Sbjct: 340 LRSSEGQLLRNGSTLSAGDAVEAQLHQGVLSLTVQTWQPETSE 382 >gi|118471910|ref|YP_889472.1| exodeoxyribonuclease VII large subunit [Mycobacterium smegmatis str. MC2 155] gi|118173197|gb|ABK74093.1| exodeoxyribonuclease VII, large subunit [Mycobacterium smegmatis str. MC2 155] Length = 404 Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats. Identities = 94/356 (26%), Positives = 162/356 (45%), Gaps = 12/356 (3%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI--IWKGTLNK 75 ++ + ++ L V V G+++ + S + L+D + + + + Sbjct: 2 RAVATRVAKWIDR-LGVVWVEGQLTELKIRPDSKTVFMVLRDPAADMSLTLTCPRDLVRN 60 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EG + ++ GK + G + + + + G G LL +E+ ++ L EGLF Sbjct: 61 APVRLTEGTQVIICGKPNFYTGRGTFSLRVSEIRAVGIGELLARIERLRRLLDAEGLFDP 120 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 + K IPF+P I +IT A RD+ S R+P +R I VQG +I +A+ Sbjct: 121 RLKRSIPFLPNTIGLITGRASAAERDVTTVASSRWPAVRFAIRNTIVQGPNAVPQIVDAL 180 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 L+ P D+I+LARGGGS+EDL F+DE + RAI+ P++SAIGHE D Sbjct: 181 AALDA------DPEVDVIVLARGGGSVEDLLPFSDETLCRAISACRTPVVSAIGHEPDNP 234 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313 + D ADLRA TPT AA+ VP Q+ + +L R + + + + L+ L Sbjct: 235 VCDLVADLRAATPTDAAKRIVPDAAAEQALISDLHRRSARALRNWVHREQHHLDQLRSRP 294 Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L ++ + R + ++ +I + H+ R+ + + + Sbjct: 295 VLAQPLAAITARGDEIHRARATAQRDITRLIAGETDTIGHLSARLTALGPAATLAR 350 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 9/167 (5%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407 ++ +++ ++ +Q I + ++ R + + L LR Sbjct: 238 LVADLRAATPTDAAKRIVPDAAAEQALISDLHRRSARALRNWVHREQHHLDQLRSRPVLA 297 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 Q I I + + ++ I ++ + L + TL RGY +Q Sbjct: 298 QPLAAITARGDEIHRARATAQRDITRLIAGETDTIGHLSARLTALGPAATLARGYAVVQA 357 Query: 468 --TNN--NFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 + + TR+ + DG A + + Sbjct: 358 VPDTGPPTVLRSTDDAPAGTRLRVRVSDGVVTARSEGTEDDETGSST 404 >gi|239929159|ref|ZP_04686112.1| exodeoxyribonuclease VII large subunit [Streptomyces ghanaensis ATCC 14672] Length = 387 Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats. Identities = 100/368 (27%), Positives = 166/368 (45%), Gaps = 12/368 (3%) Query: 21 SYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA--IIWKGTLNKIEF 78 S + ++ L V V G+I+ +G + +L+D I ++ + + Sbjct: 2 SRLIGGWIDR-LGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDISVGVTCYRQVFDAVAD 60 Query: 79 LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138 + EG +V K + + + + P G G LL LE+ KK L EGLF+ + K Sbjct: 61 VVSEGARVVVHCKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQLKKSLAREGLFAPERK 120 Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQL 197 P+PF+P++I ++ A RD+L+ R+P +R + V VQG ++ A+ +L Sbjct: 121 KPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQGVHAVPQVVQAVKEL 180 Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257 + L D+II+ARGGGS+EDL F+DE +VRA+A P++SAIGHE D L D Sbjct: 181 DAL------DDVDVIIVARGGGSVEDLLPFSDEQLVRAVAACRTPVVSAIGHEPDNPLLD 234 Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LP 315 + ADLRA TPT AA+ VP + L R + L+ + L L L Sbjct: 235 HVADLRASTPTDAAKKVVPDVGEEHERVRMLRDRARRCVRALVDREERGLAQALARPSLQ 294 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + + + + L +L + R +H R+ + +++ + Sbjct: 295 DPHRMVDARAEEVTALLERGRRSLRHQLDRADSELSHTHARVVALSPAATLKRGYAVLQR 354 Query: 376 KQQHIEQI 383 + Sbjct: 355 ADGQAVRA 362 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 2/132 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + + + + V+ + + +A + + + L+ R Sbjct: 257 EEHERVRMLRDRARRCVRALVDREERGLAQALAR--PSLQDPHRMVDARAEEVTALLERG 314 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L H++ + +S T + + + TLKRGY +Q + + + + Sbjct: 315 RRSLRHQLDRADSELSHTHARVVALSPAATLKRGYAVLQRADGQAVRAPGEVEAGEALRA 374 Query: 488 NFFDGQANAIVI 499 +G+ V Sbjct: 375 RVSEGEFTVRVD 386 >gi|261337704|ref|ZP_05965588.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium gallicum DSM 20093] gi|270277148|gb|EFA23002.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium gallicum DSM 20093] Length = 446 Score = 218 bits (554), Expect = 3e-54, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 167/371 (45%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN-- 60 P +++ + VS LS VE V V G+I +S Y +L+D+ Sbjct: 38 PALARDTTAENPWPVSLLSQKYHTAVER-WPAVWVEGQIIEINTRRAS-SVYITLRDSTQ 95 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + G ++ ++G ++ GK + ++ + + + G+G L + Sbjct: 96 DVSLSVNGF-GMFAQMARNFKQGDRVVIHGKADLWVKQTRLSLRGDDIRRIGAGDLKERI 154 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++KL EGLF K +P P+ I +I +P D++ ++ R+P + I Sbjct: 155 EELRRKLKGEGLFDQDRKVALPEFPRTIGLICAPQARAEGDVITNVNLRWPTVNFHIVHT 214 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +CP E+ +AI QL+ P D+II+ARGGGS EDL F+DE +VRA A Sbjct: 215 HVQGAQCPPEVIDAIRQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAEC 268 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SAIGHE DWTL D AADLRA TPT AA+ VP + + A++ + Sbjct: 269 VTPIVSAIGHEDDWTLIDLAADLRASTPTDAAKRVVPDVREQTQLVSSAMAQMTMRLTAR 328 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + + L L LD R + L + + + Sbjct: 329 LDNETRLVEGYVNRPSLTRPQTILEPHERFLDEATRRMRIALTRLADEEQLVVERNEATL 388 Query: 358 KSDFLIHNIQK 368 ++ + + Sbjct: 389 RALSPQSTLDR 399 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 15/169 (8%), Positives = 46/169 (27%), Gaps = 7/169 (4%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ ++ + E Q + + + + L Sbjct: 278 HEDDWTLIDLAADLRASTPTDAAKRVVPDVRE-QTQLVSSAMAQMTMRLTARLDNETRLV 336 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + + + + R+ L+ V L++ + ++T Sbjct: 337 EGYVNRPSLTRPQTILEPHERFLDEATRRMRIALTRLADEEQLVVERNEATLRALSPQST 396 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 L RGY + + + + ++ + I G A + Sbjct: 397 LDRGYAVVMTADGHVVDSASHVTQGDELTITLKRGAVVAQAQTVVTEER 445 >gi|332886347|gb|EGK06591.1| exodeoxyribonuclease VII, large subunit [Dysgonomonas mossii DSM 22836] Length = 455 Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats. Identities = 97/510 (19%), Positives = 192/510 (37%), Gaps = 75/510 (14%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNH------- 61 ++ P S+ EL+ +K +++ L V +R E S R +GH Y + Sbjct: 1 MNRPAISLYELNNLIKGVLKETLPEVFWIRAETSDVRVN-QNGHCYLEFIEKDINGRALI 59 Query: 62 SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ +IW T ++ E G++ LV + + + + + P+ Sbjct: 60 AKARGMIWANTFYILKAYFENTTKQTFSSGLKVLVQVSVEFHELYG-FTLTVHDIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G K+L E+G+ S + +P IA+I+SPT A D L +++ Sbjct: 119 LGDQALNRAAIIKQLEEDGVLSLNKELELPIPTNKIAIISSPTAAGYEDFLDQLANNPYG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QG+ I +A+ ++ ++ D +++ RGGG+ DL F+ Sbjct: 179 FIFYTKLFPALMQGERTESSIISALERIYEYQDC-----FDAVVIIRGGGATSDLSSFDS 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 ++ + A +P+I+ IGHE D T+ D A R TPT AE + L + Sbjct: 234 YLLAASCAQFPLPVITGIGHERDDTVLDIVAHTRMKTPTAVAEFLIGNIAETAMELDEMA 293 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + +++ + L RL + L+ + + Sbjct: 294 HDIVSVVTQR---------------------LQDEAVRLSVFETKNTFLLKAWLKEQDTI 332 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + N + L + ++N + Q +L ++ Sbjct: 333 LSSAKNVLIRG-LQSSHKENHSKLSSFQ-------------------------DILIRES 366 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + ++ ++ + K K +T + + + L + +N LK+GYT + Sbjct: 367 QQLNKESINNLTVFENTLKRVALQKFKDENTQLDMFEKHLLLASPENILKKGYTLTM-KD 425 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499 I Q + ++ F DG+ ++IV Sbjct: 426 GKVIKQSSAVKKGDKLTTVFADGKLDSIVK 455 >gi|271969673|ref|YP_003343869.1| exodeoxyribonuclease VII [Streptosporangium roseum DSM 43021] gi|270512848|gb|ACZ91126.1| Exodeoxyribonuclease VII [Streptosporangium roseum DSM 43021] Length = 402 Score = 217 bits (553), Expect = 4e-54, Method: Composition-based stats. Identities = 96/368 (26%), Positives = 161/368 (43%), Gaps = 14/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + V + + + L V V G+I+ G + +L+D + + Sbjct: 2 SSKTTPEQPLPVRTVLQMVGGWI-GKLGTVWVEGQITELTAR--GGTVFLTLRDPVANVS 58 Query: 66 A--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 A +G P +G ++ K + + + P G G LL LE+ Sbjct: 59 ARVTCPRGVYEATVPRPVDGARVVMHLKPDFWVNKGSFAFTALEMRPVGVGELLARLERL 118 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 ++ L EGLF K +PF+P I +I A RD+L+ R+P +R + PV VQ Sbjct: 119 RQVLAAEGLFGVDRKRRLPFLPGTIGLICGRDSAAERDVLENSRRRWPAVRFKVEPVAVQ 178 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G E+ A+ + + E D+I++ARGGGS+EDL F+DE +VRA+A P Sbjct: 179 GPYAVTEVGEALRKFDADGE------VDVIVIARGGGSMEDLLPFSDEALVRAVAACRTP 232 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 ++SAIGHE D L D AD+RA TPT AA+ VP + + L R + ++ Sbjct: 233 VVSAIGHEQDNPLLDLVADVRASTPTDAAKKVVPDVGEQLTLIRQLRDRGRRVAGGWLER 292 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L ++ L + + + + ++L +L + R H+ R+ S Sbjct: 293 ETTWLAAVRSRPSLADPVREIERRAEQAEQLRDRARRSLTGSLDRAQDSLEHLRARLVSL 352 Query: 361 FLIHNIQK 368 +++ Sbjct: 353 SPAATLER 360 Score = 100 bits (250), Expect = 5e-19, Method: Composition-based stats. Identities = 24/159 (15%), Positives = 54/159 (33%), Gaps = 5/159 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + ++ +++ +K + E+ I Q+ + R + + L Sbjct: 239 HEQDNPLLDLVADVRASTPTDAAKKVVPDVGEQLTLIRQLRDRGRRVAGGWLERETTWLA 298 Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 +R + I ++L R L+ + S+ L S + TL Sbjct: 299 AVRSRPSLADPVREIERRAEQAEQLRDRARRSLTGSLDRAQDSLEHLRARLVSLSPAATL 358 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 +RGY +Q + + + ++A + I F D + Sbjct: 359 ERGYAIVQRPTGDVVRRAGDVAPGDELTIRFPDDRVTVR 397 >gi|315501921|ref|YP_004080808.1| exodeoxyribonuclease vii, large subunit [Micromonospora sp. L5] gi|315408540|gb|ADU06657.1| exodeoxyribonuclease VII, large subunit [Micromonospora sp. L5] Length = 424 Score = 217 bits (552), Expect = 4e-54, Method: Composition-based stats. Identities = 97/372 (26%), Positives = 158/372 (42%), Gaps = 12/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 S S + V +S + + + L V V G+++ + + +L+D Sbjct: 20 QSRSDGRSTAEEPWPVRVVSQKVGAWI-ARLGWVWVDGQVAQISRRPGASTVFLTLRDPS 78 Query: 62 SRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + + L+ EG ++ K + + + + G G LL Sbjct: 79 ADLSLTVTTNRDVLDAGAPELREGARVVLHAKPEFYAARGTLSLRADEIRQVGLGELLAR 138 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 LEK KK L EGLF K +PF+P + +IT A RD+L R+P + Sbjct: 139 LEKLKKLLAAEGLFDRSRKRRLPFLPGRVGLITGRASAAERDVLTNARRRWPAVDFRTIN 198 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG +I A+ L+ P D+I++ARGGG IEDL F+DE + RA+ Sbjct: 199 VAVQGPSAVPDIVGALKVLDA------DPAVDVIVIARGGGGIEDLLPFSDEALCRAVFA 252 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 P++SAIGHETD L DY AD+RA TPT AA+ VP + +RL + Sbjct: 253 CRTPVVSAIGHETDAPLLDYVADVRASTPTDAAKRIVPDLTEETRLIGQARSRLERAVRH 312 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 L+ + + ++ L L + + L +LE + H + R Sbjct: 313 LVDREQHRIDLLRSRPVLARPQVMVEQRAVDVSALRDRAGRSLEHRLRGATDDLRHTLAR 372 Query: 357 IKSDFLIHNIQK 368 +++ +++ Sbjct: 373 LRALSPAATLER 384 Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 53/135 (39%), Gaps = 2/135 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + I + + +E+ V+ + + + + + + + + + L Sbjct: 292 LTEETRLIGQARSRLERAVRHLVDR--EQHRIDLLRSRPVLARPQVMVEQRAVDVSALRD 349 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R L H+++ + T L++ + TL+RGY +Q + + + +A + Sbjct: 350 RAGRSLEHRLRGATDDLRHTLARLRALSPAATLERGYAIVQRADGHVVRAASEVAKGDPL 409 Query: 486 LINFFDGQANAIVIN 500 + +G+ A V Sbjct: 410 RVRLAEGELTATVDG 424 >gi|183602102|ref|ZP_02963470.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis subsp. lactis HN019] gi|219683014|ref|YP_002469397.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis subsp. lactis AD011] gi|241191334|ref|YP_002968728.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196740|ref|YP_002970295.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183218595|gb|EDT89238.1| exodeoxyribonuclease VII large subunit [Bifidobacterium animalis subsp. lactis HN019] gi|219620664|gb|ACL28821.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium animalis subsp. lactis AD011] gi|240249726|gb|ACS46666.1| Exonuclease VII large subunit [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251294|gb|ACS48233.1| Exonuclease VII large subunit [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177459|gb|ADC84705.1| Exodeoxyribonuclease VII large subunit [Bifidobacterium animalis subsp. lactis BB-12] gi|295794327|gb|ADG33862.1| Exonuclease VII large subunit [Bifidobacterium animalis subsp. lactis V9] Length = 432 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 105/378 (27%), Positives = 170/378 (44%), Gaps = 12/378 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS +S VE V + G+I SG AY +L+DN Sbjct: 27 PRMAAQTTAENPWPVSMVSQKFHSAVER-WPAVWMEGQIIEINTR-RSGSAYLTLRDNDQ 84 Query: 63 RID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + +++ G ++ ++G +V GK + S++ + + + G+G L + Sbjct: 85 DVSMSVLGFGAFAQMARDYKQGDRVVVHGKADLYVKSTRLSLRADMIKRVGAGNLQEQIN 144 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + + +L EGLF + K +P PK I +I +P D++ ++ R+P +R I Sbjct: 145 QLRMRLKGEGLFDESRKVALPEFPKNIGLICAPQARAEGDVVMNVNLRWPGVRFTIVHAH 204 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG++CP +I +AI QL+ P D+II+ARGGGS EDL F+DE +VRA A + Sbjct: 205 VQGEQCPPDIVSAIQQLDA------DPNVDVIIVARGGGSFEDLMGFSDERVVRATAACA 258 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 PIISAIGHE DWTL D AAD+RA TPT AA+ VP Q + R+ I Sbjct: 259 TPIISAIGHEDDWTLIDLAADVRASTPTDAAKRVVPDVREQQQLITEGINRMRTFIANRA 318 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L L + + + L I+ + + ++ Sbjct: 319 GNEERLVEGYANRPSLTQPLTMLIPHERDIADAVSAMRNGLRRIVDEEQMQVERLAATLR 378 Query: 359 SDFLIHNIQKNRQHILEK 376 + + + + Sbjct: 379 ALSPQSTLDRGYAVLQNA 396 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 46/160 (28%), Gaps = 7/160 (4%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ ++ + E QQ + +R + L Sbjct: 267 HEDDWTLIDLAADVRASTPTDAAKRVVPDVRE-QQQLITEGINRMRTFIANRAGNEERLV 325 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 Q + I ++ + L + V L++ + ++T Sbjct: 326 EGYANRPSLTQPLTMLIPHERDIADAVSAMRNGLRRIVDEEQMQVERLAATLRALSPQST 385 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 L RGY +Q+ + I + + + G+ + Sbjct: 386 LDRGYAVLQNADGAIIDDASQVQVGDELTLTLRRGKVVSQ 425 >gi|329946085|ref|ZP_08293721.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328527867|gb|EGF54855.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 450 Score = 217 bits (552), Expect = 5e-54, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 156/369 (42%), Gaps = 16/369 (4%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDA 66 + + + LS + V + +S V V G+I +G A+ +L+D + + Sbjct: 39 TTAENPWPLRLLSSKIDQYV-ARMSQVWVEGQIIQLNRRPGAGMAFLTLRDTDADVSMSV 97 Query: 67 IIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 I+ L + EG +V K T + Q+ + + P G G LL +E+ Sbjct: 98 AIYARVLDAVLARTGAELSEGARVVVRAKPTFWTKRGSLQLQADDIRPVGVGDLLARIEQ 157 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 ++ L EGLF + K P+PF+P + ++ D+L R+P L + V V Sbjct: 158 LRRILAAEGLFDAERKRPLPFLPHKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAV 217 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG E+ AI E + D+I++ARGGG++EDL F+DE +VRA A Sbjct: 218 QGARAVGEVTRAIQ------ELDADAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRT 271 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHETD L D AD RA TPT AA VP L + RL ++ + Sbjct: 272 PLVSAIGHETDCPLLDLVADYRASTPTDAARRIVPDLAQETVGLDSARERLRTVLASRLD 331 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+ L + + + L + + + + R+ + Sbjct: 332 AEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVGHRLSLAAADLRADHARLTA 391 Query: 360 DFLIHNIQK 368 + + Sbjct: 392 LSPQGVLDR 400 Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 16/136 (11%), Positives = 43/136 (31%), Gaps = 2/136 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++ + ++ R + + + + + + R+ + Sbjct: 315 LDSARERLRTVLAS--RLDAEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVG 372 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 H++ + L + + + L RGYT ++ IT ++ I G Sbjct: 373 HRLSLAAADLRADHARLTALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLAHG 432 Query: 493 QANAIVINKAPPKEQP 508 + A V+ P+ Sbjct: 433 RLVAQVVGATRPRPAN 448 >gi|229496822|ref|ZP_04390531.1| exodeoxyribonuclease VII, large subunit [Porphyromonas endodontalis ATCC 35406] gi|229316233|gb|EEN82157.1| exodeoxyribonuclease VII, large subunit [Porphyromonas endodontalis ATCC 35406] Length = 478 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 100/528 (18%), Positives = 194/528 (36%), Gaps = 74/528 (14%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH------ 61 + +S+ EL+ ++ E N V E SG + GH YF L + Sbjct: 4 PIPMKVFSLHELNSSIRRAFEQNFGGRFWVTAETSGIKSPPQGGHFYFELLEKGEREGQI 63 Query: 62 -SRIDAIIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPSG 112 +R A++W+ ++ + E G++ ++ + Y + + L P+ Sbjct: 64 LARSRAVMWRASVGSLLTKFESATGQTFTNGLQVQLLVGVHFHEQFGLY-LDVYDLDPTF 122 Query: 113 -SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---C 168 G + + ++L EGL Q + + IAVI+S + A D I Sbjct: 123 TLGDMARKRRETLERLRREGLLDCQKALTLGRPLRHIAVISSASAAGWGDFYSHIQAARE 182 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 ++P + ++P +QG+ I +A+ ++ ++ D ++L RGGG+ DL F+ Sbjct: 183 QWPFHLQLYPALMQGEGTTTSILSALREI-----AQSGIAYDCVVLIRGGGAEIDLMAFD 237 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 + AIA +PII IGHE D ++AD A TPT AE + +E + L L Sbjct: 238 SYELCAAIARYPLPIIVGIGHERDTSVADRVAHHSLKTPTAVAEFLLNSREREWTLLRKL 297 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 RL ++ + Y L RL L ++ +++ Sbjct: 298 SERLQRSVVLMQDY---------------------HLVLLQRLVHHLPIAIKESTQQEFF 336 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 ++ L + + RQ I ++ + + + + L+ Sbjct: 337 KLQRQEATLQRTAL-MLLAQERQRIEHCSYLLKATMP---KLLLSYQSVLEQEQQHLQRV 392 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + ++ L R++Q + + TLKRGY+ ++ Sbjct: 393 LPLILEKKKESLEHL----------------------ARLVQLLSPRQTLKRGYSIVRKA 430 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516 + + + + L + I ++G+ A V + P + Sbjct: 431 DKSIL-SSQQLTRGDTLEIFLYEGRVGAQVSSVELPPSDSNDPENSTS 477 >gi|15828045|ref|NP_302308.1| exodeoxyribonuclease VII large subunit [Mycobacterium leprae TN] gi|221230522|ref|YP_002503938.1| exodeoxyribonuclease VII large subunit [Mycobacterium leprae Br4923] gi|14194740|sp|Q9X783|EX7L_MYCLE RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|4539096|emb|CAB39814.1| putative exodeoxyribonuclease large subunit [Mycobacterium leprae] gi|13093598|emb|CAC30895.1| exonuclease VII large subunit [Mycobacterium leprae] gi|219933629|emb|CAR72037.1| exonuclease VII large subunit [Mycobacterium leprae Br4923] Length = 428 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 169/370 (45%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S + + + V ++ + ++ L V V G+++ ++ + L+D + Sbjct: 14 ASSQVNSAENPFPVRAVALRIAGWIDK-LGTVWVEGQLAQITMRPNAKTVFMVLRDPAAD 72 Query: 64 ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 I + + + EGI+ +V GK + + G + + + + G G LL ++ Sbjct: 73 ISLIVTCSRDFVLRAPVKLAEGIQVVVCGKPSFYIGRGTFSLRLSDIRAVGIGELLVRID 132 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF + K PIPF+P +I +IT A RD+ S R+P R I Sbjct: 133 RLRRLLDSEGLFDPRLKRPIPFLPNMIGIITGRASAAERDVTTVASARWPAARFAIRNTA 192 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG +I A L+E ++I++ARGGGS+EDL F+DE + RAIA Sbjct: 193 VQGPNAVSQIVEA------LRELDRNVDVEVIVVARGGGSVEDLLTFSDETLCRAIAACR 246 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P+ISA+GHE D L D ADLRA TPT AA+ VP Q + +L+ R + + Sbjct: 247 TPVISAVGHEPDNPLCDLVADLRAATPTDAAKKVVPDAAVEQRLIEDLQRRSAQALRNWV 306 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + TL L L +TL+ + R + + ++ + H+ ++ Sbjct: 307 SREQRTLVQLRSRPVLAEPLRTLTTRSEEIHRAQSAIRREIIRLVTTETERVGHLATQLA 366 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 367 TLGPAATLAR 376 Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 13/166 (7%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ +K +Q+ IE + ++ + + + L LR + Sbjct: 264 LVADLRAATPTDAAKKVVPDAAVEQRLIEDLQRRSAQALRNWVSREQRTLVQLRSRPVLA 323 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I + + I + + + V L + TL RGY +Q Sbjct: 324 EPLRTLTTRSEEIHRAQSAIRREIIRLVTTETERVGHLATQLATLGPAATLARGYAIVQA 383 Query: 468 -TNNN------FITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 + + + T TR+ + DG A V Sbjct: 384 LEDGTQTVTAAVLRSVDDAPTGTRLRVRVSDGAIVA-VSEGRADGP 428 >gi|229819597|ref|YP_002881123.1| exodeoxyribonuclease VII, large subunit [Beutenbergia cavernae DSM 12333] gi|229565510|gb|ACQ79361.1| exodeoxyribonuclease VII, large subunit [Beutenbergia cavernae DSM 12333] Length = 432 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 94/373 (25%), Positives = 165/373 (44%), Gaps = 16/373 (4%) Query: 3 PFSQKNSLDHP--EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 P + + P + V L+ + V+ +S V + G++ SG ++F+L+D Sbjct: 30 PLAARALDTSPEHPWPVRVLASKISEYVDR-MSPVWIEGQVVELNRR--SGMSFFTLRDT 86 Query: 61 HS--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 + + + I E G +V K + +P + + G G LL Sbjct: 87 DADMSLSVTAMPRLMAAIATPLETGAHVVVHAKPSFWPKRGTLTMQARDIRAVGIGDLLA 146 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ ++ L EGLF K P+PF+P I ++ D++ R+P + I Sbjct: 147 RIEQLRRVLAAEGLFDADRKRPLPFLPHRIGLVCGREAKAKHDVVVNARDRYPDVEFEIR 206 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 V VQG E++ AI L+ PR D+I++ RGGG++EDL F++E +VRA+A Sbjct: 207 EVAVQGVSAVAEVSRAIADLDA------DPRVDVIVVTRGGGAVEDLLPFSNEALVRAVA 260 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P++SAIGHETD L D AD RA TPT AA+ VP +++L + +R+ + Sbjct: 261 ACRTPLVSAIGHETDTPLLDLVADYRASTPTDAAKRIVPDVAGERANLTQVRSRMRRAVE 320 Query: 298 RLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 ++ + + L++L L ++ RL R + + Sbjct: 321 HRVRTEQDRLDALRTRPVLAQPLVLVTSREERLHRDLATARRVFGHRLEHARADVAGLAQ 380 Query: 356 RIKSDFLIHNIQK 368 +++ + + Sbjct: 381 AVRTLSPQSTLDR 393 Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 13/130 (10%), Positives = 46/130 (35%), Gaps = 2/130 (1%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R ++ + + + + V+ +R + + Q + + + + Sbjct: 304 ERANLTQVRSRMRRAVEHRVRTEQD--RLDALRTRPVLAQPLVLVTSREERLHRDLATAR 361 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + H+++ V+ + +++ + ++TL RGY ++ + ++ + Sbjct: 362 RVFGHRLEHARADVAGLAQAVRTLSPQSTLDRGYAVLRSDEGTVVRDPADVTAAQELEAL 421 Query: 489 FFDGQANAIV 498 G +V Sbjct: 422 VAGGTFGVVV 431 >gi|54026771|ref|YP_121013.1| exodeoxyribonuclease VII large subunit [Nocardia farcinica IFM 10152] gi|81822865|sp|Q5YQ92|EX7L_NOCFA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|54018279|dbj|BAD59649.1| putative exodeoxyribonuclease VII large subunit [Nocardia farcinica IFM 10152] Length = 425 Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats. Identities = 104/369 (28%), Positives = 170/369 (46%), Gaps = 12/369 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62 S + + V +S + ++ L + V G+I+ + A+ L+D + Sbjct: 6 SAPANSAEHPWPVRSVSVKVMQWIDR-LGSIWVEGQITQINLRPGARTAFLVLRDPSADM 64 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + + + +EG +V GK+ FP + + + P G G LL +E+ Sbjct: 65 SLQVTCDPELIRRSPVPLQEGSRVVVYGKLVFFPARGSISLRVLEIRPVGVGELLARIER 124 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K L EGLF ++ K PIPF+PK++ +IT GA D+L R+P +R + V Sbjct: 125 LKALLAAEGLFDERLKRPIPFLPKVVGLITGRGGAAEHDVLTVARNRWPAVRFEVRNTAV 184 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +I A L E P ++I+LARGGGS+EDL F+DE + RAI ++ Sbjct: 185 QGPTAVPQILTA------LAELDRHPEVEVIVLARGGGSVEDLLPFSDEALCRAIVAATT 238 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 PI+SAIGHE D L+DY ADLRA TPT AA+ VP + + L AR + + Sbjct: 239 PIVSAIGHEPDNPLSDYVADLRAATPTDAAKRVVPDAAAELALVRELRARSAAALRGWVD 298 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L L L + + + ++RL + + +I + H+ ++ + Sbjct: 299 REARALAQLRSRPVLADPLREIDRRATEIERLRADARRCVRHLIRTESTATAHLREKLTA 358 Query: 360 DFLIHNIQK 368 + + Sbjct: 359 VGPAATLAR 367 Score = 77.5 bits (189), Expect = 6e-12, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 8/127 (6%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + + + I T I++L Sbjct: 283 RELRARSAAALRGWVDREARALAQLRSR-----PVLADPLREIDRRATEIERLRADARRC 337 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN---NFITQKRNLATKTRILI 487 + H I++ T+ + L + TL RGY +Q + + + +++ I Sbjct: 338 VRHLIRTESTATAHLREKLTAVGPAATLARGYAVVQRVTGPERHVVRSIADSPAGSQLRI 397 Query: 488 NFFDGQA 494 DG Sbjct: 398 RVADGAV 404 >gi|330874760|gb|EGH08909.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 225 Score = 216 bits (551), Expect = 6e-54, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 127/219 (57%), Gaps = 10/219 (4%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS + +SGH YF+LKD+ Sbjct: 16 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNF-SRPASGHVYFTLKDSG 73 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 74 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 134 ALKAKLSDEGLFSAERKIALPVHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 VQG E +I A+ ++ D +ILARGGG Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGG 225 >gi|294791492|ref|ZP_06756649.1| exodeoxyribonuclease VII, large subunit [Scardovia inopinata F0304] gi|294457963|gb|EFG26317.1| exodeoxyribonuclease VII, large subunit [Scardovia inopinata F0304] Length = 431 Score = 216 bits (550), Expect = 7e-54, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + VS+LS VE + G+I + G AY +L+D Sbjct: 25 PERASETTPDNPWPVSKLSLAYHTAVER-WPATWIEGQIQEINTRRA-GSAYITLRDNVE 82 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + W+ + + G + +V G + + I + + G G L + Sbjct: 83 DISLQVSGWRTFAAQASQFVQ-GDKVVVHGHPDVWMKRTSLSFIGDDIRRVGKGDLRQQI 141 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ +KKL EGLF D +K +P P+ I +I +P DI+ R+P ++ I V Sbjct: 142 EELRKKLKGEGLFDDSNKIALPEFPQRIGIICAPQARAEGDIVTNAKLRWPTIQFTIEHV 201 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +CP E+ AI +L+ P D+II+ARGGGS EDL F+DE +VRA A+ Sbjct: 202 HVQGVQCPPEVIAAIEKLDA------DPAVDLIIVARGGGSFEDLIGFSDEGVVRATADC 255 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SAIGHE DWTL D AAD+RA TPT AA+ VP + + RL+ ++R Sbjct: 256 QTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVMEQITIIQEARHRLHERLLRT 315 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ + +++ L L + R L+ ++ ++ + + Sbjct: 316 VESEQQRIDAYKNRPSLTQPQTILEKPHLFITESARRLDVSMRRLLDEAGFSVEKLQASL 375 Query: 358 KSDFLIHNIQK 368 + + + Sbjct: 376 TALSPQSTLNR 386 Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 5/167 (2%) Query: 344 FRKYRHFNHIINRIKSDFLI----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + +++ + + I Q+ ++ ++ LR + E++ Sbjct: 265 HEDDWTLIDLAADMRASTPTDAAKRVVPDVMEQITIIQEARHRLHERLLRTVESEQQRID 324 Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 A + Q + + H I + R++ + + SV L + + ++TL Sbjct: 325 AYKNRPSLTQPQTILEKPHLFITESARRLDVSMRRLLDEAGFSVEKLQASLTALSPQSTL 384 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 RGY +Q ++ + I+ +L+ ++ + G+A V + P K Sbjct: 385 NRGYAVVQSSDGHVISDSSSLSLHQKLTVTLKQGKAITSVESIEPKK 431 >gi|297572046|ref|YP_003697820.1| exodeoxyribonuclease VII large subunit [Arcanobacterium haemolyticum DSM 20595] gi|296932393|gb|ADH93201.1| exodeoxyribonuclease VII, large subunit [Arcanobacterium haemolyticum DSM 20595] Length = 421 Score = 216 bits (550), Expect = 8e-54, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 173/371 (46%), Gaps = 15/371 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + + L+ + + S +S + V GEI + +F+L D Sbjct: 14 PPVARETSPDHPWPLRLLNAKIAEYI-SKMSRLWVEGEIITLTRRKGAKVQFFTLSDLEE 72 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + I I+ + E G +V K + G+ + ++ + G G +L + Sbjct: 73 KASITCKIFAHA---LPDGIESGSRVIVCAKPDFWSGNGTLALHVDEIRAVGLGDILARI 129 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPV 179 E K KL EGLF+ Q K P+PF+P+ I +I + D+ R+ + V Sbjct: 130 EALKNKLAYEGLFAPQRKKPLPFLPRTIGLIVGRNTKALHDVQVNARARWASAEFAVREV 189 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +E+ A+ +L+ L P D+I++ARGGGS+EDL F+DE ++RA+A + Sbjct: 190 VVQGPTAVQEMIPALEELDAL------PNVDVIVIARGGGSVEDLLPFSDERLIRAVAAA 243 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHETD L D ADLRA TPT AA VP Q+ L + R + L Sbjct: 244 HTPVVSAIGHETDNPLLDLVADLRASTPTDAARKIVPDVTEEQTGLRDAVRRGRLAMDAL 303 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L+ L + + L L +L + L +NL+ I R + + R+ Sbjct: 304 LTRTQHDLDIQRSRPALAHPESMLDARAQDLTQLTQWLHNNLDRHITRHASLIDSSLARL 363 Query: 358 KSDFLIHNIQK 368 ++ + +Q+ Sbjct: 364 RALSPLATLQR 374 Score = 97.1 bits (240), Expect = 7e-18, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 6/169 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ +++ +K + E+Q + V++ + L Sbjct: 253 HETDNPLLDLVADLRASTPTDAARKIVPDVTEEQTGLRDAVRRGRLAMDALLTRTQHDLD 312 Query: 404 MLREQT-----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + R + ++ + + +L + L I + + + L++ + TL Sbjct: 313 IQRSRPALAHPESMLDARAQDLTQLTQWLHNNLDRHITRHASLIDSSLARLRALSPLATL 372 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 +RGY ++ +T N I+ DG A V K P E Sbjct: 373 QRGYAVLRTQTG-VVTSVHNATPGETIIAQLADGTFTATVNAKGPAHET 420 >gi|302865377|ref|YP_003834014.1| exodeoxyribonuclease VII large subunit [Micromonospora aurantiaca ATCC 27029] gi|302568236|gb|ADL44438.1| exodeoxyribonuclease VII, large subunit [Micromonospora aurantiaca ATCC 27029] Length = 430 Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats. Identities = 97/372 (26%), Positives = 157/372 (42%), Gaps = 12/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 S S + V +S + + + L V V G+++ + + +L+D Sbjct: 26 QSRSDGRSTAEEPWPVRVVSQKVGAWI-ARLGWVWVDGQVAQISRRPGASTVFLTLRDPS 84 Query: 62 SRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + + L+ EG ++ K + + + + G G LL Sbjct: 85 ADLSLTVTTNRDVLDAGAPELREGARVVLHAKPEFYAARGTLSLRADEIRQVGLGELLAR 144 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 LEK KK L EGLF K +PF+P + +IT A RD+L R+P + Sbjct: 145 LEKLKKLLAAEGLFDRSRKRRLPFLPGRVGLITGRASAAERDVLTNARRRWPAVDFRTIN 204 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG +I A+ L P D+I++ARGGG IEDL F+DE + RA+ Sbjct: 205 VAVQGPSAVPDIVGALKVL------DVDPAVDVIVIARGGGGIEDLLPFSDEALCRAVFA 258 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 P++SAIGHETD L DY AD+RA TPT AA+ VP + +RL + Sbjct: 259 CRTPVVSAIGHETDAPLLDYVADVRASTPTDAAKRVVPDLTEETRLIGQARSRLERAVRH 318 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 L+ + + ++ L L + + L +LE + H + R Sbjct: 319 LVDREQHRIDLLRSRPVLARPQVMVEQRAVDVSALRDRAGRSLEHRLRGATDDLRHTLAR 378 Query: 357 IKSDFLIHNIQK 368 +++ +++ Sbjct: 379 LRALSPAATLER 390 Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 53/135 (39%), Gaps = 2/135 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + I + + +E+ V+ + + + + + + + + + L Sbjct: 298 LTEETRLIGQARSRLERAVRHLVDR--EQHRIDLLRSRPVLARPQVMVEQRAVDVSALRD 355 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R L H+++ + T L++ + TL+RGY +Q + + + +A + Sbjct: 356 RAGRSLEHRLRGATDDLRHTLARLRALSPAATLERGYAIVQRVDGHVVRAASEVAKGDPL 415 Query: 486 LINFFDGQANAIVIN 500 + +G+ A V Sbjct: 416 RVRLAEGELTATVDG 430 >gi|308235619|ref|ZP_07666356.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC 14018] Length = 471 Score = 216 bits (549), Expect = 9e-54, Method: Composition-based stats. Identities = 104/371 (28%), Positives = 166/371 (44%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHS-SGHAYFSLKDNH 61 P ++ + VS +S VE V G+I S SG Y +L+D++ Sbjct: 66 PLKAADTTAENPWPVSVISQKFHGAVEK-WPAAWVEGQIVEINMRRSTSG--YITLRDSN 122 Query: 62 SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I +I+ + +G +V GK + +++ + + + G+G L + Sbjct: 123 EDISISIMGFSKFVQQSKDLRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 182 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 ++ +KKL EGLF ++K P+P PK I ++ +P D++ ++ R+P+ R + Sbjct: 183 DELRKKLKGEGLFDVENKVPLPEFPKCIGLVCAPQARAEGDVITNVNLRWPVTRFKVVHA 242 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +CP ++ AI QL+ P D+II+ARGGGS EDL F+DE +VRA A Sbjct: 243 HVQGVQCPADVIAAIKQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAAC 296 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SAIGHE DWTL D AAD+RA TPT AA+ VP + N I Sbjct: 297 VTPIVSAIGHEDDWTLIDLAADMRASTPTDAAKRVVPDVNEQWQLIDNALQHARMRISAR 356 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + +I + L L + + + H L ++ I Sbjct: 357 VSNEIQLIEGYANRPSLTRPSTMLEPHELFVQQAVERMRHGLVRLLDDASLTVEKAHASI 416 Query: 358 KSDFLIHNIQK 368 + + + Sbjct: 417 TALSPQSTLNR 427 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 53/166 (31%), Gaps = 5/166 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ ++ + E+ Q I+ ++ I +I ++ Sbjct: 306 HEDDWTLIDLAADMRASTPTDAAKRVVPDVNEQWQLIDNALQHARMRISARVSNEIQLIE 365 Query: 403 ----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + +++ + R+ L + +V + + + ++TL Sbjct: 366 GYANRPSLTRPSTMLEPHELFVQQAVERMRHGLVRLLDDASLTVEKAHASITALSPQSTL 425 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 RGY +Q + + + T I + G A V + Sbjct: 426 NRGYAVVQISGGKVLDDSSRVKTGDDITVTLKSGLITASVTSVEKS 471 >gi|300789870|ref|YP_003770161.1| exodeoxyribonuclease VII large subunit [Amycolatopsis mediterranei U32] gi|299799384|gb|ADJ49759.1| exodeoxyribonuclease VII large subunit [Amycolatopsis mediterranei U32] Length = 415 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 12/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 S + V ++ + + L V V G+++ ++ A+ +L+D Sbjct: 4 ESAPAPTSTAESPWPVRTVARKIGDWIHR-LGAVWVEGQVTQVSSRPNTQTAFLTLRDPS 62 Query: 62 S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + + ++E EG +V K + F G + + + G G LL Sbjct: 63 ADVSMSVTCPNWLIREMEPPLREGASVVVHAKPSYFFGRGTISLRADQIRAVGIGELLAR 122 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ KK L EGLFS Q K PIPF+PK + +IT A RD+L R+P +R+ + Sbjct: 123 IERLKKLLTAEGLFSAQRKRPIPFLPKGVGLITGRASAAERDVLANAQGRWPHVRIKVLN 182 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG + ++ A+ + P D+I++ARGGGS+EDL F+DE + RA++ Sbjct: 183 TAVQGSQAVPQVMRALRIFDA------DPDIDVIVIARGGGSVEDLLPFSDEALCRAVSA 236 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SAIGHE D L DY ADLR TPT A + VP + + R + Sbjct: 237 TGTPVVSAIGHEPDTPLLDYVADLRCSTPTDAGKRIVPDLREETERVRQMRDRGRRALHG 296 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + LN + L + + + +D + ++ + + R Sbjct: 297 WVDTQARLLNQIRSRPALADPLGPVQRRQDDVDVHRERARRAMLSLLAKDQAEVANARAR 356 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 357 LTALGPAATLAR 368 Score = 93.7 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 18/159 (11%), Positives = 49/159 (30%), Gaps = 9/159 (5%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + ++ ++ + E+ + + Q+ + R + + +L+ +R + Sbjct: 256 YVADLRCSTPTDAGKRIVPDLREETERVRQMRDRGRRALHGWVDTQARLLNQIRSRPALA 315 Query: 413 -----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466 + + R + + V+ L + TL RGY +Q Sbjct: 316 DPLGPVQRRQDDVDVHRERARRAMLSLLAKDQAEVANARARLTALGPAATLARGYAVVQF 375 Query: 467 -DTNN--NFITQKRNLATKTRILINFFDGQANAIVINKA 502 D + + ++ + DG A+ + Sbjct: 376 VDAEGNLQVLRSVSEVEAGAQLRVRVGDGAIKAVAEGEQ 414 >gi|118578622|ref|YP_899872.1| exodeoxyribonuclease VII [Pelobacter propionicus DSM 2379] gi|118501332|gb|ABK97814.1| Exodeoxyribonuclease VII large subunit [Pelobacter propionicus DSM 2379] Length = 526 Score = 216 bits (549), Expect = 1e-53, Method: Composition-based stats. Identities = 106/527 (20%), Positives = 204/527 (38%), Gaps = 49/527 (9%) Query: 15 YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAI 67 + +S ++ + ++E +S V+ EIS G G Y L + ++ +I Sbjct: 6 FPLSAITKRINELLEPAISKQFWVKAEIS--TGRERGGAFYCDLVETNAGGKIVAKIACT 63 Query: 68 IWKGTLNKIE--FLPEEGIEFLVIGKI-----TT-FPGSSKYQIIIESLIPS-GSGTLLT 118 IW+ L I F + L G + + F + + PS G + Sbjct: 64 IWQSELATIRRAFKAKNMDLVLSNGTVVGFLCSLQFSPQYGLSLRVIDADPSIALGEMEL 123 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS-CRFPLRVIIF 177 ++L +EG+F + +P +P + +ITS A D +Q ++ + +V + Sbjct: 124 KKRDIIERLQKEGMFETNKELSVPLLPLRLGLITSAGSAAYNDFIQTLTASGYGFKVFVA 183 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 +QGD+ K + A+ L L D++ + RGGGS DL+ ++E I R IA Sbjct: 184 DAMMQGDQTEKSVMRALDALARL-------EVDLVSIVRGGGSKTDLYFLDNEAIARRIA 236 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P+ + IGHE D ++ DY A+ TPT AAE V ++ L L + Sbjct: 237 GFGKPVWTGIGHEIDTSVLDYVANRSFKTPTAAAEELVARFIQMRRQLDEATNTLQTVWT 296 Query: 298 RLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 +K + L + + S + L + L +EL ++ + + R Sbjct: 297 YRLKLDRDYLTRAMTGIRQGSRKLLDVTASFLREQAKELRLKVQERLSTEQVVIGRRTER 356 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL--------------------RYIFLEKK 396 ++S + IQ + + K+Q + + R + +E+ Sbjct: 357 LRS-LPMAMIQNLAERLAAKRQELRSRTYSRISRSGDTLSVLKQRFVKERFLRRLLVERD 415 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRILQSFAYK 455 + + L+ + + + L R++ + + + S++ IL++ + Sbjct: 416 SIMKVRQQLKTRFLSTFRIKSMTLANLKGRLKEERILLRFGTARNSLNDKMAILKAIDPQ 475 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 L+RG+ + N I ++ K + DG + VI K Sbjct: 476 TVLQRGFALVYGRNGALIRSINDVTEKEIMTTRLTDGSLISEVIAKE 522 >gi|257487186|ref|ZP_05641227.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 225 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 76/219 (34%), Positives = 126/219 (57%), Gaps = 10/219 (4%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 16 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 74 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 134 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 193 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 VQG E +I A+ ++ D +ILARGGG Sbjct: 194 VQGREAINQIVRALKLADSR-------GFDALILARGGG 225 >gi|254364015|ref|ZP_04980061.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium tuberculosis str. Haarlem] gi|134149529|gb|EBA41574.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium tuberculosis str. Haarlem] Length = 415 Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats. Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 13/367 (3%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65 +NS ++P + V ++ + ++ L V V G+++ + + L+D + + Sbjct: 3 QNSAENP-FPVRAVAIRVAGWIDK-LGAVWVEGQLAQITMRPDAKTVFMVLRDPAADMSL 60 Query: 66 -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 + + EG++ +V GK + + G + + + + G G LL +++ + Sbjct: 61 TVTCSRDLVLSAPVKLAEGVQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLARIDRLR 120 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 + L EGLF + K PIP++P +I +IT A RD+ S R+P R + V VQG Sbjct: 121 RLLDAEGLFDPRLKRPIPYLPNMIGLITGRASAAERDVTTVASARWPAARFAVRNVAVQG 180 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +I A L+E P D+I+LARGGGS+EDL F+DE + RAIA P+ Sbjct: 181 PNAVGQIVEA------LRELDRDPDVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV 234 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +SA+GHE D L D DLRA TPT AA+ VP Q + +L R + + + Sbjct: 235 VSAVGHEPDNPLCDLVVDLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSRE 294 Query: 304 INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L L + +S + R L NL +++ + H+ R+ + Sbjct: 295 QRAVAQLRSRPVLADPMTMVSVRAEEVHRARSTLRRNLTLMVAAETERIGHLAARLATLG 354 Query: 362 LIHNIQK 368 + + Sbjct: 355 PAATLAR 361 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 40/140 (28%), Gaps = 12/140 (8%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R +++ + + R + + + + + + + Sbjct: 271 AEQRLIDDLRRRSAQALRNWVSREQRAVAQLR---SRPVLADPMTMVSVRAEEVHRARST 327 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-----TNN----NFITQKR 477 + L+ + + + L + TL RGY +Q + Sbjct: 328 LRRNLTLMVAAETERIGHLAARLATLGPAATLARGYAIVQTVAQTGPEGGSEPQVLRSVH 387 Query: 478 NLATKTRILINFFDGQANAI 497 + T++ + DG A+ Sbjct: 388 DAPEGTKLRVRVGDGALAAV 407 >gi|332828152|gb|EGK00864.1| exodeoxyribonuclease VII, large subunit [Dysgonomonas gadei ATCC BAA-286] Length = 455 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 100/510 (19%), Positives = 183/510 (35%), Gaps = 75/510 (14%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH------- 61 +++ S+ EL+ +K ++ L V +R E+S R +GH Y + Sbjct: 1 MNNQAISLYELNNLIKGVLNDTLPEMVWIRAEMSDVRVN-QNGHCYLEFIEKDRAGKTLV 59 Query: 62 SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ +IW T + + E G++ LV I + + + + PS Sbjct: 60 AKARGMIWANTFHLLRAYFENSTKQTFSSGLKVLVQVSIEFHELYG-FSLTVHDIDPSYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G K+L E+G+ + +P IA+I+SPT A D L ++ Sbjct: 119 LGDQALNRAAILKQLEEDGVLYLNKELELPVPLNRIAIISSPTAAGYEDFLDQLHKNAFG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QGD I +A+ + ++ D +++ RGGG+ DL F+ Sbjct: 179 FVFYTKLFPAIMQGDRSEDSIISALEHIYEYQDC-----FDAVVIIRGGGATSDLSSFDS 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 ++ + A +PII+ IGHE D T+ D A RA TPT AE V + L + Sbjct: 234 YLLAASCAQFPLPIITGIGHERDETVLDIVAHTRAKTPTAVAEFLVDNLTETATELTEIS 293 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + +++ + L RL + L+ + Sbjct: 294 QDIVSLVSQR---------------------LQDETVRLSVFETKNSFALKGWYKEQLTV 332 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + N + + I++ + ++ K K L + Sbjct: 333 LSSARNVLAKGMI----------------RIQRENQNKFAFLEDNLKRKSLQLLKDNQS- 375 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 L ++ + + K + + L + +N LK+GYT + Sbjct: 376 ---------KFSLLEDSLKRSIQQQYKEETNRLETLDKQLHLSSPENILKKGYTLTI-KD 425 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499 + Q L I F DG+ +I+ Sbjct: 426 GKVVKQSGMLRKGDEITTFFPDGKVESIIK 455 >gi|108801071|ref|YP_641268.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. MCS] gi|119870213|ref|YP_940165.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. KMS] gi|123368840|sp|Q1B4H2|EX7L_MYCSS RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158513068|sp|A1UKL7|EX7L_MYCSK RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|108771490|gb|ABG10212.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. MCS] gi|119696302|gb|ABL93375.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. KMS] Length = 411 Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats. Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 14/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P + + V ++ + ++ L V + G+++ + ++ A+ L+D Sbjct: 3 TPADDQGKSPENPWPVRAVATRVAKYIDR-LGMVWIEGQLTELKIRQTT--AWMVLRDPA 59 Query: 62 S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + + + EG + +V+GK + + + + I + G G LL Sbjct: 60 ADMSLSVSCPRDLVANAPVPLSEGTQVIVLGKPQFYTRNGSFSLRISEIRAVGIGELLAR 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +++ ++ L EGLF + K PIPF+P I +IT RD++ + R+P +R + Sbjct: 120 IDRLRRLLDAEGLFDPRLKRPIPFLPGTIGLITGRASHAERDVMTVAANRWPAVRFAVRN 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +I A L+E P D+I+LARGGGS+EDL F+DE + R IA+ Sbjct: 180 TIVQGPNAVPQIVGA------LRELDRDPGVDVIVLARGGGSVEDLLPFSDETLCREIAS 233 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SA+GHE D L D ADLRA TPT AA+ VP Q+ + +L R + + Sbjct: 234 CTTPVVSAVGHEPDNPLCDLVADLRAATPTDAAKRVVPDAAAEQAFVTDLRRRSARALRQ 293 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + + L+ L L Q + + R ++ ++ + H+ R Sbjct: 294 WVHREQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSAR 353 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 354 LTTLGPAATLAR 365 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 31/107 (28%), Gaps = 1/107 (0%) Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + I + + + + + V + L + Sbjct: 297 REQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSARLTT 356 Query: 452 FAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAI 497 TL RGY +Q + N + + T + I DG A+ Sbjct: 357 LGPAATLARGYAVVQTMPDTNVLRTTADAPAGTHLRIRVADGAITAV 403 >gi|15608248|ref|NP_215624.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis H37Rv] gi|15840545|ref|NP_335582.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis CDC1551] gi|31792301|ref|NP_854794.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis AF2122/97] gi|121637039|ref|YP_977262.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660894|ref|YP_001282417.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis H37Ra] gi|148822321|ref|YP_001287075.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis F11] gi|167969243|ref|ZP_02551520.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis H37Ra] gi|215402939|ref|ZP_03415120.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis 02_1987] gi|215410729|ref|ZP_03419537.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis 94_M4241A] gi|215426403|ref|ZP_03424322.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis T92] gi|215429983|ref|ZP_03427902.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis EAS054] gi|215445275|ref|ZP_03432027.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis T85] gi|219556994|ref|ZP_03536070.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis T17] gi|224989512|ref|YP_002644199.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis BCG str. Tokyo 172] gi|253799852|ref|YP_003032853.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis KZN 1435] gi|254231386|ref|ZP_04924713.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium tuberculosis C] gi|254550106|ref|ZP_05140553.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186037|ref|ZP_05763511.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis CPHL_A] gi|260200149|ref|ZP_05767640.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis T46] gi|260204352|ref|ZP_05771843.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis K85] gi|289442538|ref|ZP_06432282.1| exodeoxyribonuclease VII, large subunit [Mycobacterium tuberculosis T46] gi|289446698|ref|ZP_06436442.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis CPHL_A] gi|289555105|ref|ZP_06444315.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis KZN 605] gi|289569101|ref|ZP_06449328.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis T17] gi|289573761|ref|ZP_06453988.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis K85] gi|289744851|ref|ZP_06504229.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis 02_1987] gi|289749644|ref|ZP_06509022.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis T92] gi|289753174|ref|ZP_06512552.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis EAS054] gi|289757197|ref|ZP_06516575.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis T85] gi|294993290|ref|ZP_06798981.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis 210] gi|297633648|ref|ZP_06951428.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis KZN 4207] gi|297730635|ref|ZP_06959753.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis KZN R506] gi|298524605|ref|ZP_07012014.1| exodeoxyribonuclease 7 large subunit [Mycobacterium tuberculosis 94_M4241A] gi|306775264|ref|ZP_07413601.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu001] gi|306781822|ref|ZP_07420159.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu002] gi|306783820|ref|ZP_07422142.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu003] gi|306788182|ref|ZP_07426504.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu004] gi|306792511|ref|ZP_07430813.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu005] gi|306796916|ref|ZP_07435218.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu006] gi|306802794|ref|ZP_07439462.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu008] gi|306967178|ref|ZP_07479839.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu009] gi|306971365|ref|ZP_07484026.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu010] gi|307083658|ref|ZP_07492771.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu012] gi|313657965|ref|ZP_07814845.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis KZN V2475] gi|54037075|sp|P67448|EX7L_MYCBO RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|54041041|sp|P67447|EX7L_MYCTU RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158512944|sp|A1KHP8|EX7L_MYCBP RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158513363|sp|A5U1F5|EX7L_MYCTA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|254783703|sp|C1AMA2|EX7L_MYCBT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|2896745|emb|CAA17224.1| PROBABLE EXODEOXYRIBONUCLEASE VII (LARGE SUBUNIT) XSEA (EXONUCLEASE VII LARGE SUBUNIT) [Mycobacterium tuberculosis H37Rv] gi|13880722|gb|AAK45396.1| exodeoxyribonuclease, large subunit [Mycobacterium tuberculosis CDC1551] gi|31617889|emb|CAD93999.1| PROBABLE EXODEOXYRIBONUCLEASE VII (LARGE SUBUNIT) XSEA (EXONUCLEASE VII LARGE SUBUNIT) [Mycobacterium bovis AF2122/97] gi|121492686|emb|CAL71155.1| Probable exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600445|gb|EAY59455.1| exodeoxyribonuclease VII (large subunit) xseA [Mycobacterium tuberculosis C] gi|148505046|gb|ABQ72855.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis H37Ra] gi|148720848|gb|ABR05473.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis F11] gi|224772625|dbj|BAH25431.1| exodeoxyribonuclease VII large subunit [Mycobacterium bovis BCG str. Tokyo 172] gi|253321355|gb|ACT25958.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis KZN 1435] gi|289415457|gb|EFD12697.1| exodeoxyribonuclease VII, large subunit [Mycobacterium tuberculosis T46] gi|289419656|gb|EFD16857.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis CPHL_A] gi|289439737|gb|EFD22230.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis KZN 605] gi|289538192|gb|EFD42770.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis K85] gi|289542855|gb|EFD46503.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis T17] gi|289685379|gb|EFD52867.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis 02_1987] gi|289690231|gb|EFD57660.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis T92] gi|289693761|gb|EFD61190.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis EAS054] gi|289712761|gb|EFD76773.1| exodeoxyribonuclease VII large subunit [Mycobacterium tuberculosis T85] gi|298494399|gb|EFI29693.1| exodeoxyribonuclease 7 large subunit [Mycobacterium tuberculosis 94_M4241A] gi|308216198|gb|EFO75597.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu001] gi|308325461|gb|EFP14312.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu002] gi|308331384|gb|EFP20235.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu003] gi|308335196|gb|EFP24047.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu004] gi|308339002|gb|EFP27853.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu005] gi|308342672|gb|EFP31523.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu006] gi|308350478|gb|EFP39329.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu008] gi|308355129|gb|EFP43980.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu009] gi|308359082|gb|EFP47933.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu010] gi|308366652|gb|EFP55503.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu012] gi|323720389|gb|EGB29483.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis CDC1551A] gi|326904665|gb|EGE51598.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis W-148] gi|328459597|gb|AEB05020.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis KZN 4207] Length = 415 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 13/367 (3%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65 +NS ++P + V ++ + ++ L V V G+++ + + L+D + + Sbjct: 3 QNSAENP-FPVRAVAIRVAGWIDK-LGAVWVEGQLAQITMRPDAKTVFMVLRDPAADMSL 60 Query: 66 -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 + + EG++ +V GK + + G + + + + G G LL +++ + Sbjct: 61 TVTCSRDLVLSAPVKLAEGVQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLARIDRLR 120 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 + L EGLF + K PIP++P +I +IT A RD+ S R+P R + V VQG Sbjct: 121 RLLDAEGLFDPRLKRPIPYLPNMIGLITGRASAAERDVTTVASARWPAARFAVRNVAVQG 180 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +I A L+E P D+I+LARGGGS+EDL F+DE + RAIA P+ Sbjct: 181 PNAVGQIVEA------LRELDRDPDVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV 234 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +SA+GHE D L D DLRA TPT AA+ VP Q + +L R + + + Sbjct: 235 VSAVGHEPDNPLCDLVVDLRAATPTDAAKKVVPDTAAEQRLIDDLRRRSAQALRNWVSRE 294 Query: 304 INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L L + +S + R L NL +++ + H+ R+ + Sbjct: 295 QRAVAQLRSRPVLADPMTMVSVRAEEVHRARSTLRRNLTLMVAAETERIGHLAARLATLG 354 Query: 362 LIHNIQK 368 + + Sbjct: 355 PAATLAR 361 Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 40/140 (28%), Gaps = 12/140 (8%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R +++ + + R + + + + + + + Sbjct: 271 AEQRLIDDLRRRSAQALRNWVSREQRAVAQLR---SRPVLADPMTMVSVRAEEVHRARST 327 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-----TNN----NFITQKR 477 + L+ + + + L + TL RGY +Q + Sbjct: 328 LRRNLTLMVAAETERIGHLAARLATLGPAATLARGYAIVQTVAQTGPEGGSEPQVLRSVH 387 Query: 478 NLATKTRILINFFDGQANAI 497 + T++ + DG A+ Sbjct: 388 DAPEGTKLRVRVADGALAAV 407 >gi|116071440|ref|ZP_01468709.1| Exonuclease VII, large subunit [Synechococcus sp. BL107] gi|116066845|gb|EAU72602.1| Exonuclease VII, large subunit [Synechococcus sp. BL107] Length = 387 Score = 215 bits (547), Expect = 2e-53, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 9/320 (2%) Query: 12 HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P YSV EL+ + ++E + +S R GH + +L D + I ++W Sbjct: 6 IPTYSVGELNTAIGSLLERGFAPRFLLEATVS--RPQVKKGHLWLTLTDGTASISGVVWA 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 L ++ + P +G V+GK+ + + + + PS T+L E+ +++L EE Sbjct: 64 SKLAQLSYRPTDGDGVTVVGKLNFWAARASITVQALDIRPS-LSTVLRQFEQVRQRLEEE 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189 G+ + + +P P +A++TS + + D+L+ R+P+ R+++ PV VQG + Sbjct: 123 GVINPGRRRSLPPQPATLALLTSVPSSALADMLRTGRERWPMTRLLVIPVPVQGAVAGQI 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I LN L E D ++LARGGGS EDL F+DE + R +A P+++ IGH Sbjct: 183 I----KALNRLAERCDALAVDGLVLARGGGSREDLAVFDDEALCRCLAKFPRPVVTGIGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD AD RA TPT A +P ++ + SL + R+ ++I I LN Sbjct: 239 EDDLTIADLVADHRAATPTAAMVACLPDRDSAKRSLQDRRQRMKDLIGWRITRDRQRLND 298 Query: 310 LLKALPNSDQTLSCSRYRLD 329 L + + D Sbjct: 299 RRARLHQQSPLRRLHQLQDD 318 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 47/139 (33%), Gaps = 5/139 (3%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYLHTHIKKLITRI-EFIL 431 H + ++ L R++ K+ RI + R+ + Sbjct: 249 ADHRAATPTAAMVACLPDRDSAKRSLQDRRQRMKDLIGWRITRDRQRLNDRRARLHQQSP 308 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 ++ ++ +L++ + + L+RG + + +T ++ RI++ D Sbjct: 309 LRRLHQLQDDLNRKRDLLRALSPSHWLERGLALLTNNAGEALTAVTSIKVGDRIVVQMND 368 Query: 492 GQANAIVINKAPPKEQPTK 510 G+ + V P + Sbjct: 369 GELDTDVKVVRPSSLKSKT 387 >gi|220913295|ref|YP_002488604.1| exodeoxyribonuclease VII large subunit [Arthrobacter chlorophenolicus A6] gi|219860173|gb|ACL40515.1| exodeoxyribonuclease VII, large subunit [Arthrobacter chlorophenolicus A6] Length = 448 Score = 215 bits (546), Expect = 2e-53, Method: Composition-based stats. Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + + LS LK ++ V G++ G+AY +L+D + Sbjct: 16 PATAAETTPDNPWPLQLLSQKLKVHIDRT-PSAWVEGQVIEMNRR--GGNAYLTLRDVDA 72 Query: 63 RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + A +W L + E G + + K + + + + + + P G G LL + Sbjct: 73 EVSLPASVWTKVLERKNLPLERGSRVVALLKPEFWLKTGRLNMQVRDIRPVGLGDLLARI 132 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L EGLF+D K P+P +P I +IT +D+++ + R+P + I V Sbjct: 133 ERLRQALAAEGLFADSRKRPLPLLPHRIGLITGRDSDAKKDVVRNAALRWPAVEFEIREV 192 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ ++ A L+E P D+I++ARGGG++EDL FN E +VRA+A + Sbjct: 193 AVQGNSAVSQVVRA------LRELDGLPEVDVIVIARGGGALEDLLPFNSEELVRAVAAA 246 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 + P++SAIGHE D L D ADLRA TPT AA+ VP + + +L I RL Sbjct: 247 TTPVVSAIGHEADRPLLDDVADLRASTPTDAAKRIVPEVSEELAGVRQAREQLRRCIERL 306 Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + L L + + ++ ++RL R + + R H+ ++ Sbjct: 307 VDRESDRLAALHSRPVLASPEGLVTVRSEEIERLLRRSSTAVNSTVVRAGDRLEHLRTQV 366 Query: 358 KSDFLIHNIQK 368 ++ + + Sbjct: 367 RALSPQKTLDR 377 Score = 87.1 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 58/174 (33%), Gaps = 10/174 (5%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHMLREQTKN 411 + +D + + + + +Q EQ+ + R + E A+ + + Sbjct: 269 LRASTPTDAAKRIVPEVSEELAGVRQAREQLRRCIERLVDRESDRLAALHSRPVLASPEG 328 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ----- 466 + I++L+ R ++ + + +++ + + TL RGY ++ Sbjct: 329 LVTVRSEEIERLLRRSSTAVNSTVVRAGDRLEHLRTQVRALSPQKTLDRGYAVVELAGPH 388 Query: 467 ---DTNNN-FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516 + + + + + I +G+ A P E T Q H Sbjct: 389 AASSASGHAVVRHPADAPAGQPLAIRVAEGRFGATSTGTGSPGENSTTPEQHHP 442 >gi|290968309|ref|ZP_06559851.1| exodeoxyribonuclease VII, large subunit [Megasphaera genomosp. type_1 str. 28L] gi|290781668|gb|EFD94254.1| exodeoxyribonuclease VII, large subunit [Megasphaera genomosp. type_1 str. 28L] Length = 401 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 122/368 (33%), Positives = 186/368 (50%), Gaps = 12/368 (3%) Query: 16 SVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SV+++ LK VE + L H+ + G I G + S+GH Y +L D +S I A+ ++G Sbjct: 5 SVTDVVKRLKQKVEGDNQLQHIVMEGNIIGLK-RASTGHYYMNLHDAYSSIHAVFFRGRA 63 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 + EG + +V+G + + +IE L G G+L L ++KK+L G F Sbjct: 64 GQAMAHVREGDKVIVVGSLNVYEKGGSVSFLIERLYSQGMGSLQVQLAEQKKRLAAAGYF 123 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 HK P+P P I V+TS TGAV+ DI + S R P + V ++P+ VQG+ EIA Sbjct: 124 DAAHKQPLPRFPWHIGVLTSHTGAVLHDIRKIASERNPYITVHLYPIPVQGESAVPEIAA 183 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ + D++ILARGGGS+EDLW FN +VRAI +++P+I+AIGHETD Sbjct: 184 ALRK------AGANRTLDVLILARGGGSMEDLWCFNHSEVVRAIYETAVPVITAIGHETD 237 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 TLADYAAD+RA TPT AAE+A P LQ L L + + ++L + Sbjct: 238 TTLADYAADVRAATPTHAAELAFPSFADLQLLLTQLTETAIQRMQERQERYRHSLRQAIA 297 Query: 313 ALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 A+ + L+ R + + + RK + R+ + ++ Sbjct: 298 AIRPDRYREYLTLRRQQAISRIALAQRQWHVCQMRKRGDLQTLAARLAGLNPENLGRRGY 357 Query: 371 QHILEKQQ 378 + + Q Sbjct: 358 GQVFKDGQ 365 Score = 74.0 bits (180), Expect = 6e-11, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 46/137 (33%), Gaps = 14/137 (10%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q + E+Q+ ++Q + I ++ L + R+Q +RI R Sbjct: 279 QRMQERQERYRHSLRQAIAAIRPDRYR--EYLTLRRQQAISRIALAQRQWHVCQMR---- 332 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + L +N +RGY + + + +++ T + I Sbjct: 333 -------KRGDLQTLAARLAGLNPENLGRRGYGQVF-KDGQPVASIQSVQTGETLQIQVL 384 Query: 491 DGQANAIVINKAPPKEQ 507 DG +V P ++ Sbjct: 385 DGIVETVVKGVKPYGKR 401 >gi|158312702|ref|YP_001505210.1| exodeoxyribonuclease VII large subunit [Frankia sp. EAN1pec] gi|226736761|sp|A8L188|EX7L_FRASN RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|158108107|gb|ABW10304.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EAN1pec] Length = 401 Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 163/366 (44%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65 S V +S L + S L V V G+++ + +L+D + + Sbjct: 4 TSTPDEPLPVRTISRALGDWI-SRLGRVWVEGQVTEISRRPGMNTVFLTLRDPVADVSLR 62 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + + + +G +V GK + PG + + + P G+G LL LE+ K Sbjct: 63 VTCPRAVCDAVGPGLVDGARVVVWGKPSFHPGRGTLALAVVEIRPLGAGALLARLERLKA 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K +PF+P + +IT A RD+++ R+P +R+ + V VQG Sbjct: 123 TLAAEGLFAASRKRRLPFLPTAVGLITGRASAAERDVIENARRRWPAVRIELREVAVQGP 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +I +A L + ++I++ARGGGS+EDL F+DE ++RA+ + P++ Sbjct: 183 LAVSQILDA------LSDLDADRAVEVIVIARGGGSLEDLLPFSDEALLRAVVAARTPVV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ AD+RA TPT AA+ VP + + L +R ++ + + Sbjct: 237 SAIGHEQDTPLLDFVADVRASTPTDAAKRVVPDVSEQSALVEALRSRARRVLAHRLDLER 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L L + + + L L + R H R+++ Sbjct: 297 RRLADLRARPVLAAPLREIDRREQTVGALRSRSLRCLTHAVDVAERDLVHAAARMRALSP 356 Query: 363 IHNIQK 368 +++ Sbjct: 357 AATLER 362 Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 37/127 (29%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q L + R ++ + I + L +R Sbjct: 273 QSALVEALRSRARRVLAHRLDLERRRLADLRARPVLAAPLREIDRREQTVGALRSRSLRC 332 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L+H + + +++ + TL+RGY IQ+ + I + + + Sbjct: 333 LTHAVDVAERDLVHAAARMRALSPAATLERGYALIQNADGAVIRSPAEIEAGDPLTVRVA 392 Query: 491 DGQANAI 497 G A Sbjct: 393 GGTFAAR 399 >gi|86607590|ref|YP_476352.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556132|gb|ABD01089.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 409 Score = 214 bits (545), Expect = 3e-53, Method: Composition-based stats. Identities = 115/394 (29%), Positives = 207/394 (52%), Gaps = 16/394 (4%) Query: 9 SLDHPEYSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RI 64 + + P SV +S +LK ++ + L+ + V GE+S + +GH + +L D + + Sbjct: 6 TDEAPLLSVGGVSRYLKSLLAGDPYLARLWVSGEVSSC-QRNRNGHLFLTLTDPETGDVL 64 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 ++W+ +++ F PE G + L +G++ + G S Y+++I L+P+G G L ++ K Sbjct: 65 KGVVWQSQTSRLSFWPEVGQQVLALGQLGIYSGGSHYRLVIWQLLPAGEGLLALRFQQLK 124 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 +L EGLF +Q P+ P+ IAV++SP A DI + ++ R+P LRV+ P +VQG Sbjct: 125 ARLSAEGLFDNQRPLPV--HPQCIAVVSSPHAAGWGDIRRTLNQRYPGLRVLFSPAQVQG 182 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 + P+ I AI ++ R ++++LARGGG+ EDL FNDE +VRAIA IP+ Sbjct: 183 EAAPESIVRAIRRV------EQDGRAEVLLLARGGGASEDLACFNDERVVRAIAECRIPV 236 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 ++ IGH+ D TLADYAAD A TPT AAE VP LQ L +L + ++ Sbjct: 237 VTGIGHQRDETLADYAADYAAHTPTAAAERIVPDLGELQRQGSQLRQKLIERTRQALERA 296 Query: 304 INTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L L + ++ L ++ RL + L + ++ +H + +R+++ Sbjct: 297 QQRLQQAQHHLAYVHPERLLQQAQDRLTQHQHRLLQAVRHRFQQRQQHQQALQDRLQALD 356 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 +++ + +++ + + + + + + Sbjct: 357 PEAILKRGYALVRDEEGSLIRTHRLPPQTRLMIQ 390 Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 52/169 (30%), Gaps = 6/169 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ + ++ + E Q+ Q+ ++ + + L Sbjct: 242 HQRDETLADYAADYAAHTPTAAAERIVPDLGELQRQGSQLRQKLIERTRQALERAQQRLQ 301 Query: 404 MLRE-----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + + + R+ + H+ + LQ+ + L Sbjct: 302 QAQHHLAYVHPERLLQQAQDRLTQHQHRLLQAVRHRFQQRQQHQQALQDRLQALDPEAIL 361 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 KRGY ++D + I L +TR++I G V P + Sbjct: 362 KRGYALVRDEEGSLIR-THRLPPQTRLMIQLASGSLWVRVEESHEPPQT 409 >gi|329767038|ref|ZP_08258566.1| exodeoxyribonuclease VII [Gemella haemolysans M341] gi|328837763|gb|EGF87388.1| exodeoxyribonuclease VII [Gemella haemolysans M341] Length = 419 Score = 214 bits (545), Expect = 3e-53, Method: Composition-based stats. Identities = 113/389 (29%), Positives = 203/389 (52%), Gaps = 17/389 (4%) Query: 15 YSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ ++ K +++ L + ++GEIS ++ IH++ + YFS+KD ++RI+A+ + Sbjct: 7 LTVTALNKYIERKFLLDPYLGEIYIKGEISNFK-IHNNNNIYFSIKDENTRINAVWFGAK 65 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++G L+ KI + ++ +++ + G L + K+KL +EGL Sbjct: 66 TK----DFKDGDTVLIKSKINYYFPRGEHNLLVTDMKKDRIGELYQKFLELKEKLEKEGL 121 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F Q+K IP + IA++T+ TGA ++DI + I RFP+ ++ I+ VQG+ ++I Sbjct: 122 FLPQYKKQIPSFSQNIAIVTAKTGAAVQDITRTIQRRFPIAKINIYSTLVQGENSVQDIV 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + D+IIL RGGGSIEDLW FN E ++RAI N PI++ IGHET Sbjct: 182 KNIKLADD-------GSNDVIILGRGGGSIEDLWSFNTEEVIRAIFNCRTPIVTGIGHET 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ +D RA TPT AAE+ P E +++ + +L N I +++ N +++ Sbjct: 235 DTTLADFVSDRRASTPTAAAELVTPNIEDIKNRISFNYDKLTNTINYILQNYKNRISNSE 294 Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 N + + R ++ L +EL +L+I++ K ++ L+ ++N Sbjct: 295 NNPYYKNYSKIFTEYRRAVELLEKELSKSLQILVKDKKNDLLISKDKFIEFNLLARFKEN 354 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + + + + Y +K Sbjct: 355 FTNEVNRLEANSPLNIMKKGYSVAFLNDK 383 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 10/171 (5%) Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 N+E I R +++ + N I + + + ++ +I ++ R + L +K Sbjct: 259 PNIEDIKNRISFNYDKLTNTINYILQNYKNRISNSENNPYYKNYSKIFTEYRRAVELLEK 318 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 E L +L + KN + + + + + + L++ + N Sbjct: 319 ELSKSLQILVKDKKNDLLISKDKFIEF---------NLLARFKENFTNEVNRLEANSPLN 369 Query: 457 TLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 +K+GY+ + IT +N+ I + DG V N + + Sbjct: 370 IMKKGYSVAFLNDKK-ITSVKNVQIGDDISVKLADGSLECKVNNISDKGVK 419 >gi|326773805|ref|ZP_08233087.1| exodeoxyribonuclease VII, large subunit [Actinomyces viscosus C505] gi|326635944|gb|EGE36848.1| exodeoxyribonuclease VII, large subunit [Actinomyces viscosus C505] Length = 462 Score = 214 bits (545), Expect = 3e-53, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 160/369 (43%), Gaps = 16/369 (4%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDA 66 + + + LS + V + +S V V G++ +G A+ +L+D + + Sbjct: 51 TTAENPWPLRLLSSKIDQYV-ARMSQVWVEGQVIQLNRRPGAGMAFLTLRDTDADISMSV 109 Query: 67 IIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 I+ L + EG +V K T + Q+ + + P G G LL +E+ Sbjct: 110 SIYARVLDAVLARTGAELGEGARVVVRAKPTFWAKRGSLQLQADDIRPVGVGDLLARIEQ 169 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 ++ L EGLF + K P+PF+P+ + ++ D+L R+P L + V V Sbjct: 170 LRRILAAEGLFDAECKRPLPFLPRKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAV 229 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG E+ AI E T + D+I++ARGGG++EDL F+DE +VRA A Sbjct: 230 QGARAVGEVTRAIQ------ELDTDAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRT 283 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHETD L D AD RA TPT AA VP L + RL +++ + Sbjct: 284 PLVSAIGHETDCPLLDLVADYRASTPTDAARRIVPDLAQETVGLDSARERLRSVLASRLD 343 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+ L + + + L + + +E + R+ + Sbjct: 344 AEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVEHRLSLAAADLRADHARLTA 403 Query: 360 DFLIHNIQK 368 + + Sbjct: 404 LSPQGVLDR 412 Score = 96.7 bits (239), Expect = 7e-18, Method: Composition-based stats. Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 2/135 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++ + ++ R + + + + + + R+ + Sbjct: 327 LDSARERLRSVLAS--RLDAEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVE 384 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 H++ + L + + + L RGYT ++ IT ++ I G Sbjct: 385 HRLSLAAADLRADHARLTALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLASG 444 Query: 493 QANAIVINKAPPKEQ 507 + A V+ P+ Sbjct: 445 RLVAQVVGATKPRPA 459 >gi|126436909|ref|YP_001072600.1| exodeoxyribonuclease VII large subunit [Mycobacterium sp. JLS] gi|158513459|sp|A3Q4N2|EX7L_MYCSJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|126236709|gb|ABO00110.1| Exodeoxyribonuclease VII large subunit [Mycobacterium sp. JLS] Length = 411 Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats. Identities = 94/372 (25%), Positives = 170/372 (45%), Gaps = 14/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P + + V ++ + ++ L V + G+++ + ++ A+ L+D Sbjct: 3 TPADDQGKSPENPWPVRAVATRVAKYIDR-LGMVWIEGQLTELKIRQTT--AWMVLRDPA 59 Query: 62 S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + + + EG + +V+GK + + + + I + G G LL Sbjct: 60 ADMSLSVSCPRDLVANAPVPLSEGTQVIVLGKPQFYTRNGSFSLRISEIRAVGIGELLAR 119 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +++ ++ L EGLF + K PIPF+P I +IT RD++ + R+P +R + Sbjct: 120 IDRLRRLLDAEGLFDPRLKRPIPFLPGTIGLITGRASHAERDVMTVAANRWPAVRFAVRN 179 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +I A L+E P D+I+LARGGGS+EDL F+DE + R IA+ Sbjct: 180 PIVQGPNAVPQIVGA------LRELDRDPGVDVIVLARGGGSVEDLLPFSDETLCREIAS 233 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SA+GHE D L D ADLRA TPT AA+ VP Q+ + +L R + + Sbjct: 234 CTTPVVSAVGHEPDNPLCDLVADLRAATPTDAAKRVVPDAAAEQAFVTDLRRRSARALRQ 293 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + + L+ L L Q + + R ++ ++ + H+ R Sbjct: 294 WVHREQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSAR 353 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 354 LTALGPAATLAR 365 Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 1/107 (0%) Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + I + + + + + V + L + Sbjct: 297 REQHHLDQLRSRPVLARPLQAIDARADEVHRAVAAARRDVRRMVTVESERVGHLSARLTA 356 Query: 452 FAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAI 497 TL RGY +Q + N + + TR+ I DG A+ Sbjct: 357 LGPAATLARGYAVVQTMPDTNVLRTTADAPAGTRLRIRVADGAITAV 403 >gi|260654154|ref|ZP_05859644.1| exodeoxyribonuclease VII, large subunit [Jonquetella anthropi E3_33 E1] gi|260631139|gb|EEX49333.1| exodeoxyribonuclease VII, large subunit [Jonquetella anthropi E3_33 E1] Length = 417 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 184/372 (49%), Gaps = 18/372 (4%) Query: 9 SLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKD---NHS- 62 +VSEL +K ++ N V V GE++ ++ +SGHAYFSL + + + Sbjct: 7 QAPSQVMTVSELVSLIKQAIDENPQFRRVVVEGELTEFKMHQASGHAYFSLAEKTFDRAG 66 Query: 63 ----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 RI ++++ + F+P+ G + +IG++ + + Q+ L P G+G Sbjct: 67 GRLVRIPCVMFQSWTQYMTFVPQVGDQVRLIGQVGFYADRGQVQLYATRLFPVGAGAAQR 126 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 A +++LL +G+FS + K P+P +P ++AV+TSPTGA + D+ + RFP + + Sbjct: 127 ARRALEERLLRDGVFSPERKRPMPELPLLVAVVTSPTGAAVHDVENVMKKRFPQASLTVV 186 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P VQG + P I A+ + L P +++ RGGGS +DL F+DE +VR +A Sbjct: 187 PCLVQGVDAPDSIIRALHRAYLL------PGVQAVMIVRGGGSRDDLNPFDDERLVREVA 240 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S IP++S +GH+ D T D AAD APTP+ AAE P L++ L + L +++ Sbjct: 241 RSPIPVMSGVGHDVDSTFCDRAADQFAPTPSAAAERLFPDARELENQLNAAGSHLESLVR 300 Query: 298 RLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + + L+ L K ++ L S LD L L + I + Sbjct: 301 ARLGKQGDRLSELAKRCADAASVRLRNSALWLDDLSDRLSSAALGRVRHAALKLQGISST 360 Query: 357 IKSDFLIHNIQK 368 I++ + + Sbjct: 361 IEALSPRLVLSR 372 Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 47/138 (34%), Gaps = 2/138 (1%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN-RIFYLH 417 + + + + + ++ +R ++ ++++ L + R+ Sbjct: 270 PSAAAERLFPDARELENQLNAAGSHLESLVRARLGKQGDRLSELAKRCADAASVRLRNSA 329 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + L R+ +++ + + +++ + + L RGY+ + Sbjct: 330 LWLDDLSDRLSSAALGRVRHAALKLQGISSTIEALSPRLVLSRGYSVCL-KGGVPVRSVG 388 Query: 478 NLATKTRILINFFDGQAN 495 +L + + DGQA Sbjct: 389 DLTPGDGVTLQLSDGQAQ 406 >gi|76800041|ref|ZP_00781962.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 18RS21] gi|76584641|gb|EAO61442.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 18RS21] Length = 215 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 91/219 (41%), Positives = 128/219 (58%), Gaps = 11/219 (5%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SVS L+ +LK + + L V + G++S +R + H YFSLKD+ S I A +W G Sbjct: 5 LSVSTLTKYLKLKFDKDPYLERVYLTGQVSNFRRRPN--HQYFSLKDDKSVIQATMWSGH 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 K+ F EEG++ V+G++ + S Y II+E P G G L E+ KKKL + G Sbjct: 63 FKKLGFELEEGMKVNVVGRVQLYEPSGSYSIIVEKAEPDGIGALAIQFEQLKKKLSQAGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F D+HK IP + I V+TSP+GAVIRDI+ +S RFP + +++FP KVQG+ +EIA Sbjct: 123 FDDRHKQLIPQFVRKIGVVTSPSGAVIRDIITTVSRRFPGVEILLFPTKVQGEGAAQEIA 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 I N D++I+ RGG SIEDLW F +E Sbjct: 183 QTIALAN------EKKDLDLLIVGRGGXSIEDLWAFYEE 215 >gi|78183946|ref|YP_376381.1| exonuclease VII, large subunit [Synechococcus sp. CC9902] gi|123757132|sp|Q3AZZ0|EX7L_SYNS9 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|78168240|gb|ABB25337.1| Exodeoxyribonuclease VII large subunit [Synechococcus sp. CC9902] Length = 387 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 94/352 (26%), Positives = 168/352 (47%), Gaps = 10/352 (2%) Query: 13 PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 P YSV EL+ + ++E + +S R GH + +L D + I ++W Sbjct: 7 PTYSVGELNTAIGSLLERGFAPRFLLEATVS--RPQVKKGHLWLTLTDGTASISGVVWAS 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L ++ + P +G V+GK+ + + + + PS T+L E+ +++L +EG Sbjct: 65 RLAQLSYRPTDGDGVTVVGKLNFWAARASITVQALDIRPS-LSTVLRQFEQVRQRLEDEG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 + + + +P P +A++TS + + D+L+ R+P+ R+++ P+ VQG + I Sbjct: 124 VINPGRQRSLPSQPATLALLTSVPSSALADMLRTGRERWPMTRLLVIPIPVQGAVADQII 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 LN L E D ++LARGGGS EDL F+DE + R +A P+++ IGHE Sbjct: 184 ----KVLNRLAERCEALAVDGLVLARGGGSREDLAVFDDEALCRCLAQFPRPVVTGIGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T+AD AD RA TPT A +P ++ + +L + R+ +++ I+ LN Sbjct: 240 DDLTIADLVADHRAATPTAAMVACLPDRDSAKRNLQDRRQRMKDVVGWRIERDRQRLNDR 299 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L L + D L R+ + + R + +++ + L Sbjct: 300 RAFLRQQSP-LRRLQQLQDDLNRKRDLLRALSPSRWLQRGLALLSNDAGETL 350 Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 5/134 (3%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYLHTHIKKLITRI-EFIL 431 H + ++ L R++ K+ RI + + + Sbjct: 249 ADHRAATPTAAMVACLPDRDSAKRNLQDRRQRMKDVVGWRIERDRQRLNDRRAFLRQQSP 308 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 +++ ++ +L++ + L+RG + + ++ ++ R++I D Sbjct: 309 LRRLQQLQDDLNRKRDLLRALSPSRWLQRGLALLSNDAGETLSGVTSIKVGDRVVIQMND 368 Query: 492 GQANAIVINKAPPK 505 G+ + V P Sbjct: 369 GELDTDVKVVRPSS 382 >gi|325676553|ref|ZP_08156231.1| exodeoxyribonuclease VII large subunit [Rhodococcus equi ATCC 33707] gi|325552731|gb|EGD22415.1| exodeoxyribonuclease VII large subunit [Rhodococcus equi ATCC 33707] Length = 397 Score = 213 bits (543), Expect = 4e-53, Method: Composition-based stats. Identities = 98/358 (27%), Positives = 158/358 (44%), Gaps = 15/358 (4%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTL 73 +VS + ++ L V V G+I+ + A+ L+D + L Sbjct: 3 TVS---TKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVDMSLSVTCSPQLL 58 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 EG ++ GK++ + G + + + G G LL +E+ + L EGLF Sbjct: 59 RDAPVPLTEGSRVVMFGKLSFWTGRGSVSLRVTEIRAVGIGELLARIERLRALLAAEGLF 118 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K P+PF+P I +IT A D+L R+P +R + VQG +I Sbjct: 119 DPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAHRRWPAVRFEVRNTAVQGPTAVPQIIE 178 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ E P D+IILARGGGS+EDL F+DE + RAI + P++SAIGHE D Sbjct: 179 ALE------ELDRDPGVDVIILARGGGSVEDLLPFSDETLCRAIVACTTPVVSAIGHEPD 232 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 L+D+ ADLRA TPT AA+ VP Q+ + L R + + + + + L Sbjct: 233 SPLSDHVADLRAATPTDAAKRVVPDAVAEQALVSELRGRAGAALRNWVARESHLVAQLRS 292 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + ++RL ++ I + H+ R+ + + + Sbjct: 293 RPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 4/104 (3%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + I +++L ++ I + T+V L + TL R Sbjct: 291 RSRPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350 Query: 461 GYTSIQDTNN----NFITQKRNLATKTRILINFFDGQANAIVIN 500 GY +Q + + T+I + DG A V+ Sbjct: 351 GYAVVQRVYGDTEPEVLRSVDDAPPGTQIRVRLADGAVRAAVMG 394 >gi|229818103|ref|ZP_04448385.1| hypothetical protein BIFANG_03394 [Bifidobacterium angulatum DSM 20098] gi|229784707|gb|EEP20821.1| hypothetical protein BIFANG_03394 [Bifidobacterium angulatum DSM 20098] Length = 423 Score = 213 bits (543), Expect = 5e-53, Method: Composition-based stats. Identities = 100/371 (26%), Positives = 165/371 (44%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + VS LS VE + G+I+ + G AY +++D Sbjct: 20 PRLARETTAENPWPVSVLSQKFHTAVEK-WPAAWICGQITEINTRRA-GSAYLTVRDDFE 77 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I W+ +G ++ G+ + ++ I + + G+G L + Sbjct: 78 DIAISVSGWRAFAAAAS-QFRQGDRVVIHGRADIWVKQTRLSFIGDDIRKIGAGGLKEQI 136 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 ++ +KKL EGLF K P+P P+ I +I +P D++ ++ R+P +R + Sbjct: 137 DELRKKLKGEGLFDADRKKPLPEFPRCIGLICAPQARAEGDVITNVNLRWPAVRFTVLHA 196 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +CP +I AI QL+ P D+II+ARGGG+ EDL F+DE +VRA A Sbjct: 197 HVQGAQCPPDIIAAIRQLDA------DPDVDVIIVARGGGAFEDLVGFSDEGVVRAAAAC 250 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 + P++SAIGHE DWTL D AADLRA TPT AA+ VP + N +++ I Sbjct: 251 NTPLVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDIREQCQLIDNAIRQMHMRISGR 310 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + ++ + L L + +D ++ + II + Sbjct: 311 VDAELKLIEGYANRPSLTQPLTMLEPHQRLIDDARSRMDIGMRRIIDDASLTIEKAHASL 370 Query: 358 KSDFLIHNIQK 368 + + + Sbjct: 371 TALSPQSTLNR 381 Score = 93.7 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 53/162 (32%), Gaps = 5/162 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQK----NRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + +++ +K R+ I Q+ + + E K Sbjct: 260 HEDDWTLIDLAADLRASTPTDAAKKVVPDIREQCQLIDNAIRQMHMRISGRVDAELKLIE 319 Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + Q + I +R++ + I ++ L + + ++TL Sbjct: 320 GYANRPSLTQPLTMLEPHQRLIDDARSRMDIGMRRIIDDASLTIEKAHASLTALSPQSTL 379 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 RGY +QD + + + + + +R+ + G A V + Sbjct: 380 NRGYAVVQDADGHVLDDAQRTSPGSRLTLTLKKGIVTATVDS 421 >gi|119961682|ref|YP_948520.1| exodeoxyribonuclease VII, large subunit [Arthrobacter aurescens TC1] gi|119948541|gb|ABM07452.1| exodeoxyribonuclease VII, large subunit [Arthrobacter aurescens TC1] Length = 425 Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats. Identities = 94/371 (25%), Positives = 178/371 (47%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + + LS LK +E + G++ G+A+ +L+D + Sbjct: 12 PGTAAETSPDNPWPLQLLSRKLKAHIERA-PAAWIEGQVIELNRR--GGNAFLTLRDVDA 68 Query: 63 RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I A +W L++ + E G + + K + + + + ++ + P G G LL + Sbjct: 69 EISLPASVWSTVLDRQKVPLERGSRVVALVKADFWVKTGRLNMSVKDIRPVGLGDLLARI 128 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L EGLF+D K +P +P I +IT +D+++ + R+P + + V Sbjct: 129 ERLRQALAAEGLFADSRKRKLPLLPHRIGLITGRESDAKKDVMRNAALRWPAVEFDVREV 188 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ +I A+ +L+ P D+I+LARGGG++EDL F++E ++RA++ + Sbjct: 189 AVQGNTAVSQIIAALKRLDA------DPHVDVIVLARGGGALEDLLPFSNEDLIRAVSAA 242 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 + P++SAIGHE D + D ADLRA TPT AA+ VP + + L I R+ Sbjct: 243 TTPVVSAIGHEADRPILDDVADLRASTPTDAAKRIVPDVAEELAMVRQARDHLRRSISRM 302 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + L++L L + + + RL R + + R +H+ ++ Sbjct: 303 VDRETDRLHALRSRPVLASPASMVDARSEDIHRLQRRTHSAVSTAVVRALDQVHHLRAQV 362 Query: 358 KSDFLIHNIQK 368 ++ + + Sbjct: 363 RALSPQKTLDR 373 Score = 79.8 bits (195), Expect = 9e-13, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 52/153 (33%), Gaps = 10/153 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E+ + Q R I + LH LR + Sbjct: 263 ADLRASTPTDAAKRIVPDVAEELAMVRQARDHLRRSISRMVDRETDRLHALRSRPVLASP 322 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--- 466 + + I +L R +S + V +++ + + TL RGY +Q Sbjct: 323 ASMVDARSEDIHRLQRRTHSAVSTAVVRALDQVHHLRAQVRALSPQKTLDRGYAVVQLVG 382 Query: 467 -DTNN-NFITQKRNLATKTRILINFFDGQANAI 497 D + ++ T + I +G+ A+ Sbjct: 383 EDQAGHHVVSSPDEAPDGTPLSIRVAEGRFRAV 415 >gi|312138754|ref|YP_004006090.1| exodeoxyribonuclease vii large subunit xsea [Rhodococcus equi 103S] gi|311888093|emb|CBH47405.1| exodeoxyribonuclease VII large subunit XseA [Rhodococcus equi 103S] Length = 397 Score = 213 bits (542), Expect = 7e-53, Method: Composition-based stats. Identities = 99/358 (27%), Positives = 158/358 (44%), Gaps = 15/358 (4%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDAIIWKGTL 73 +VS + ++ L V V G+I+ + A+ L+D + L Sbjct: 3 TVS---TKVAQWIDR-LGSVWVEGQITQINARPGTRTAFLVLRDPSVDMSLSVTCSPQLL 58 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 EG ++ GK++ + G + + + G G LL +E+ + L EGLF Sbjct: 59 RDAPVPLTEGSRVVMFGKLSFWTGRGSVSLRVTEIRAVGIGELLARIERLRALLAAEGLF 118 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIAN 192 + K P+PF+P I +IT A D+L R+P +R + VQG +I Sbjct: 119 DPRLKRPLPFLPGTIGLITGRASAAEHDVLSVAQRRWPAVRFEVRNTAVQGPTAVPQIIE 178 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 A+ E P D+IILARGGGS+EDL F+DE + RAI + P++SAIGHE D Sbjct: 179 ALE------ELDRDPGVDVIILARGGGSVEDLLPFSDETLCRAIVACTTPVVSAIGHEPD 232 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 L+D+ ADLRA TPT AA+ VP QS + L R + + + + + L Sbjct: 233 SPLSDHVADLRAATPTDAAKRVVPDAVAEQSLVSELRGRAGAALRNWVARESHLVAQLRS 292 Query: 313 A--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + + ++RL ++ I + H+ R+ + + + Sbjct: 293 RPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 4/104 (3%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + I +++L ++ I + T+V L + TL R Sbjct: 291 RSRPVLADPLSGIDRRAEEVERLRDTARRDVTRTIDAEATAVEHLRARLATLGPAATLAR 350 Query: 461 GYTSIQDTNN----NFITQKRNLATKTRILINFFDGQANAIVIN 500 GY +Q + + T+I + DG A V+ Sbjct: 351 GYAVVQRVYGDTEPEVLRSVDDAPPGTQIRVRLADGAVRAAVMG 394 >gi|262201633|ref|YP_003272841.1| exodeoxyribonuclease VII large subunit [Gordonia bronchialis DSM 43247] gi|262084980|gb|ACY20948.1| exodeoxyribonuclease VII, large subunit [Gordonia bronchialis DSM 43247] Length = 409 Score = 213 bits (541), Expect = 8e-53, Method: Composition-based stats. Identities = 99/370 (26%), Positives = 175/370 (47%), Gaps = 13/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62 S N+ D+P + V ++ + + L + V G+++ + A+ +L+D + Sbjct: 1 MSSPNTADNP-WPVRTVNTKIADWIHR-LGQIWVEGQVTQISRRPGTRTAFLTLRDPAAD 58 Query: 63 -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 I L + E +G +V+G+ + + G + I + P G G LL +E Sbjct: 59 ISISVTCSPDLLARTEVPLTDGSHVVVLGRPSYYTGRGTLSLRISDIRPVGIGQLLLRIE 118 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF + K P+PF+PK I +I+ A RD++ + R+ +R + Sbjct: 119 RLRQLLAAEGLFDPRLKRPLPFLPKSIGLISGRASAAARDVVAVATGRWSAVRFEVRDAP 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG I + L P ++II+ARGGGS+EDL F+DE ++RA+A + Sbjct: 179 VQGPTAVPAIL------SHLAALDAHPDVEVIIIARGGGSVEDLLPFSDEALLRAVATCT 232 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P+ISAIGHE D L D AD+RA TPT AA+ VP E +++ L R + + + Sbjct: 233 TPVISAIGHEPDAPLLDLVADVRAATPTDAAKRVVPDVEAELAAIAALRRRSAHALRNWV 292 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + + ++ L L + R+ L R L ++ + + R H+ ++ Sbjct: 293 RREAHIVDGLRARPVLARPHTLVDAEAARVGDLRRALRRDIRRRVDVEDRRIEHLSAQLG 352 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 353 TLGPAQTLAR 362 Score = 71.7 bits (174), Expect = 3e-10, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 35/103 (33%), Gaps = 2/103 (1%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + + + L + + ++ + + L + TL R Sbjct: 303 RARPVLARPHTLVDAEAARVGDLRRALRRDIRRRVDVEDRRIEHLSAQLGTLGPAQTLAR 362 Query: 461 GYTSIQ--DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 GY +Q D++ + ++ R+ I DG A+A V Sbjct: 363 GYAVVQRADSDQQIVGAVADMYPGARLRIRVSDGAAHATVTEG 405 >gi|296140799|ref|YP_003648042.1| exodeoxyribonuclease VII large subunit [Tsukamurella paurometabola DSM 20162] gi|296028933|gb|ADG79703.1| exodeoxyribonuclease VII, large subunit [Tsukamurella paurometabola DSM 20162] Length = 425 Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 177/372 (47%), Gaps = 14/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +P ++ + P + V +S + ++ L V V G+I+ G A+ L+D Sbjct: 6 SPSGGASTAESP-WPVRVVSMKVAQWIDR-LGEVWVEGQITQLNRR-GGGTAFLVLRDPS 62 Query: 62 S--RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + L++ E EG + +V GK T + G + I + G G LL Sbjct: 63 ANVSLQVTCLPAVLDRSEVPLTEGTQVIVRGKFTYWTGRGTLSLRITEIRAVGVGELLAR 122 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ ++ L EGLF + K P+PF+P+ + ++T+ A RD+ R+P +++ Sbjct: 123 IERLRQLLHAEGLFDPRLKRPLPFLPRTVGLVTARASAAERDVRSIAEDRWPDVKIRAEY 182 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG ++ A+ L+ P D+IILARGGGS+EDL F+DE + RA+ Sbjct: 183 STVQGPTAVPQLVTALRTLDA------DPDVDVIILARGGGSVEDLLPFSDEALCRAVHA 236 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + PI+SAIGHE D L D+AAD+RA TPT AA+ VP + + L R + Sbjct: 237 ARTPIVSAIGHEPDNPLCDFAADVRAATPTDAAKRVVPDVLAERDRVAELRDRAAAALRG 296 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + ++ L SL + + + +DRL R+ ++ ++ R+ H+ R Sbjct: 297 WVSREVRALESLRSRPVFAHPYRLIDDRADDIDRLRRDGRRDVRRLLDREADGVRHLAAR 356 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 357 LTALGPAATMAR 368 Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 4/65 (6%) Query: 442 VSITTRILQSFAYKNTLKRGYTSIQ----DTNNNFITQKRNLATKTRILINFFDGQANAI 497 V L + T+ RGY +Q D N + +A T++ + DG A A Sbjct: 350 VRHLAARLTALGPAATMARGYAVVQKVTPDGENPVVRGIDEIAPGTQLRVRLPDGAARAA 409 Query: 498 VINKA 502 V+ Sbjct: 410 VMGVE 414 >gi|241889623|ref|ZP_04776921.1| exodeoxyribonuclease VII, large subunit [Gemella haemolysans ATCC 10379] gi|241863245|gb|EER67629.1| exodeoxyribonuclease VII, large subunit [Gemella haemolysans ATCC 10379] Length = 418 Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats. Identities = 111/367 (30%), Positives = 186/367 (50%), Gaps = 18/367 (4%) Query: 15 YSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +V+ L+ ++ K ++ L V ++GEIS ++ + YFS+KD +S I A + Sbjct: 7 LTVTALNKYIERKFKLDPYLGEVYIKGEISNFK--PHGNNIYFSIKDENSVIRANWFGAR 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++G L+ K+ + + +++ + G L + K+KL +EGL Sbjct: 65 SKNF----KDGDTVLIKTKVDFYLKRGEVNLVVLDMKKDRIGELYQKFLELKEKLEKEGL 120 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIA 191 F Q+K IP + IAV+T+ TGA ++DI + I RFP+ ++ I+ VQG+ ++I Sbjct: 121 FLPQYKKRIPSFSQNIAVVTAKTGAAVQDITRTIQRRFPIAKINIYSTLVQGENSVQDIV 180 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 I + D+IIL RGGGSIEDLW FN E ++RAI N + PI++ IGHET Sbjct: 181 KNIKLADD-------GTNDVIILGRGGGSIEDLWSFNTEEVIRAIFNCTTPIVTGIGHET 233 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TLAD+ +D RA TPT AAE+ P E +++ + +L N I +I+ + + Sbjct: 234 DTTLADFVSDRRASTPTAAAELVTPNIEDIKNRISFNYDKLTNTINYIIQTYKTRVLNSE 293 Query: 312 K--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 N + R++ L +EL +L+I + K + + L+ ++N Sbjct: 294 NNPYYKNYSKVFIDYNNRVELLEKELNKSLQIFVKDKQHELKASTEKFLNIDLLGKFKEN 353 Query: 370 RQHILEK 376 + + K Sbjct: 354 FTNEINK 360 Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 21/112 (18%) Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRI--------------------LQSFAYK 455 + ++ L + L +K + +T L++ + Sbjct: 308 YNNRVELLEKELNKSLQIFVKDKQHELKASTEKFLNIDLLGKFKENFTNEINKLEANSPL 367 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 N +K+GY+ + IT + + I + DG V N + + Sbjct: 368 NIMKKGYSVAFLGDKK-ITTVKEIYAGDEISVQLVDGSLECKVNNISDKGVK 418 >gi|324997963|ref|ZP_08119075.1| putative exodeoxyribonuclease VII large subunit [Pseudonocardia sp. P1] Length = 425 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 14/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65 + + + V ++ + V+ L V V G+++ +G A+ +L+D + + Sbjct: 2 TTSEEDPWPVRTVARKIAEWVDR-LGAVWVEGQLAQVNAR--TGTAFLTLRDPAADVSLQ 58 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + EG +V GK + + G + ++ + G G LL +E+ ++ Sbjct: 59 LTAPSSLVRDSGGAVTEGSRVIVHGKPSFYLGRGTLSLRVDRIRAVGLGELLARIERLRR 118 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF K P +P I ++T A D++ + R+P +R I V VQG Sbjct: 119 LLDAEGLFDPALKRRPPLLPHTIGLVTGRDSAAEHDVVSGATARWPAVRFRIENVAVQGG 178 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +++ A+ L+ P +I+LARGGGS+EDL F+DE + RA+A P++ Sbjct: 179 LAVEQVVGALRTLDR------DPDVQVIVLARGGGSVEDLLPFSDETLCRAVAACRTPVV 232 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ AD+R TPT A VP + + L R + + + + Sbjct: 233 SAIGHEPDTPLVDHVADVRCSTPTAAGRSLVPDLGEETARIAGLRDRARHALHGWVDREQ 292 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L+ L + L + + + + + R H+ R+ + Sbjct: 293 RRLDDLRRRPALAEPLRLVGSREREIADARAAAHRAVLRRLDRSSAELEHLTARLTALGP 352 Query: 363 IHNIQK 368 + + Sbjct: 353 TATLAR 358 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 16/121 (13%), Positives = 32/121 (26%), Gaps = 5/121 (4%) Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465 + + I + ++ + T L + TL RGY + Sbjct: 304 LAEPLRLVGSREREIADARAAAHRAVLRRLDRSSAELEHLTARLTALGPTATLARGYAIV 363 Query: 466 Q-DTNNN----FITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKRE 520 Q + + + + T + I DG A V + + +E Sbjct: 364 QLTGSGDDVPPLLRSAADAPAGTGLRIRVADGAVAATVTGPDDDSRRASGTTTTSGTAKE 423 Query: 521 K 521 Sbjct: 424 T 424 >gi|259506965|ref|ZP_05749865.1| exodeoxyribonuclease, large subunit [Corynebacterium efficiens YS-314] gi|259165417|gb|EEW49971.1| exodeoxyribonuclease, large subunit [Corynebacterium efficiens YS-314] Length = 393 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 12/349 (3%) Query: 25 KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA--IIWKGTLNKIEFLPEE 82 K+ +E L H+ V G+++ + +Y +L+D + + ++ Sbjct: 2 KNWIER-LGHLWVEGQLAQINVKPNWKLSYLTLRDVEQEVSVQLTCPTEIIRNRPTPLKD 60 Query: 83 GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIP 142 G +V GK + G + + + + P G G LL +E+ +++L EGLF K +P Sbjct: 61 GDRVIVYGKPAFYAGRGSFSLWVTDIRPVGIGQLLARIEELRRQLAAEGLFDPARKKRLP 120 Query: 143 FIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLK 201 F+PK + +IT A RD+L R+P ++ + VQG EI A L Sbjct: 121 FLPKCVGLITGRGSAAERDVLSVARDRWPEVQFKVINTAVQGASAVPEIIAA------LG 174 Query: 202 EGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAAD 261 E P D+II+ARGGGS+EDL F++E + RA+A + P++SAIGHE D + D AD Sbjct: 175 ELDQDPGVDVIIIARGGGSVEDLLPFSEEALQRAVAAAQTPVVSAIGHEPDTPILDNVAD 234 Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQ 319 LRA TPT AA+ VP + + L R + + + L S+ L + Sbjct: 235 LRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADPMT 294 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + R ++R L ++ ++ + + ++ + + + Sbjct: 295 PIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLAR 343 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 57/161 (35%), Gaps = 10/161 (6%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E++ I Q+ + + + L +R + Sbjct: 233 ADLRAATPTDAAKRVVPDVNEERLLIRQLRDRGAAALRGWVAREQQALASIRTRPVLADP 292 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--D 467 I +++ ++ + ++H +++ + V+ + + TL RGY+ +Q Sbjct: 293 MTPIVRRREEVERAVSLLRRDVNHMLRTEQSLVASLRAQVSALGPSATLARGYSVVQVVP 352 Query: 468 TNN---NFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + +T +++ I DG A +N Sbjct: 353 RDGTPPQVVTTIEQTPPGSQLRIRVADGAITAAAMNTQKSD 393 >gi|310286998|ref|YP_003938256.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium bifidum S17] gi|309250934|gb|ADO52682.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium bifidum S17] Length = 471 Score = 212 bits (540), Expect = 1e-52, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 15/372 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + VS LS VE + G+I+ + G AY +++D Sbjct: 70 PRLAAETTADNPWPVSVLSQKFHTAVER-WPAAWIAGQITEINTRRA-GSAYLTVRDDVE 127 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT-LLTA 119 I W+ +K ++G +V GK + ++ I + + GSG L Sbjct: 128 DIAISVSGWRAFASKAA-SFKQGDRVVVHGKADIWVKQTRLSFIGDDIRKIGSGGGLKEQ 186 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +++ + KL EGLF K P+P P I +I +P D++ + R+P +R I Sbjct: 187 IDQLRMKLKGEGLFDADRKLPLPEFPSCIGLICAPHARAEGDVITNVRLRWPTVRFNIVH 246 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +CP+ I AI +L+ P D+II+ARGGGS EDL F+DE +VRA A Sbjct: 247 AFVQGPQCPQSIVEAIHRLDA------DPDVDVIIVARGGGSFEDLIGFSDEAVVRATAG 300 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 PI+SAIGHE DWTL D AADLRA TPT AA+ VP + N R+ I Sbjct: 301 CETPIVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAIDRMRMRIDA 360 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + +I + L L + +D R ++ L I+ + Sbjct: 361 RVGNEIRLVEGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHAS 420 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 421 LTALSPQSTLDR 432 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 7/160 (4%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ +K + E+ Q I + +R + L Sbjct: 311 HEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAI-DRMRMRIDARVGNEIRLV 369 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 Q + + R++ L+ + +V L + + ++T Sbjct: 370 EGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHASLTALSPQST 429 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 L RGY +Q+ + + I + + + G A Sbjct: 430 LDRGYAVVQNADGHVIDDAGKVGAGDHLTLTLRKGVITAT 469 >gi|311063873|ref|YP_003970598.1| exodeoxyribonuclease VII large subunit [Bifidobacterium bifidum PRL2010] gi|310866192|gb|ADP35561.1| XseA Exodeoxyribonuclease VII large subunit [Bifidobacterium bifidum PRL2010] Length = 471 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 15/372 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + VS LS VE + G+I+ + G AY +++D Sbjct: 70 PRLAAETTADNPWPVSVLSQKFHTAVER-WPAAWIAGQITEINTRRA-GSAYLTVRDDVE 127 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT-LLTA 119 I W+ +K ++G +V GK + ++ I + + GSG L Sbjct: 128 DIAISVSGWRAFASKAA-SFKQGDRVVVHGKADIWVKQTRLSFIGDDIRKIGSGGGLKEQ 186 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +++ + KL EGLF K P+P P I +I +P D++ + R+P +R I Sbjct: 187 IDQLRMKLKGEGLFDADRKLPLPEFPSCIGLICAPHARAEGDVITNVRLRWPTVRFNIVH 246 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +CP+ I AI +L+ P D+II+ARGGGS EDL F+DE +VRA A Sbjct: 247 AFVQGPQCPQSIVEAIHRLDA------DPDVDVIIVARGGGSFEDLIGFSDEAVVRATAG 300 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 PI+SAIGHE DWTL D AADLRA TPT AA+ VP + N R+ I Sbjct: 301 CETPIVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAIDRMRMRIDA 360 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + +I + L L + +D R ++ L I+ + Sbjct: 361 RVGNEIRLVEGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHAS 420 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 421 LTALSPQSTLDR 432 Score = 93.3 bits (230), Expect = 8e-17, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 49/160 (30%), Gaps = 7/160 (4%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ +K + E+ Q I + +R + L Sbjct: 311 HEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAI-DRMRMRIDARVGNEIRLV 369 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 Q + + R++ L+ + +V L + + ++T Sbjct: 370 EGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHASLTALSPQST 429 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 L RGY +Q+ + + I ++ + + G A Sbjct: 430 LDRGYAVVQNADGHVIDDAGKVSAGDHLTLTLRKGVITAT 469 >gi|260905864|ref|ZP_05914186.1| exodeoxyribonuclease VII large subunit [Brevibacterium linens BL2] Length = 435 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 99/371 (26%), Positives = 171/371 (46%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH- 61 P + + + +S LS +K ++ +S V + G++ + +Y +L+D Sbjct: 22 PATAGETTAENPWPLSLLSSKMKSYIDR-MSSVWIEGQVVELNHRGKA--SYLTLRDTDV 78 Query: 62 -SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + IWK L + EG + K + + + + + G G LL L Sbjct: 79 ETSLPVQIWKNVLERTGAPLSEGSHVVANLKADFWTKTGRLTMRANDIRAVGLGELLARL 138 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ KK+L EGLF K +PF+P I +IT +D++Q + R+P I Sbjct: 139 ERLKKQLGAEGLFDPNRKKRLPFLPNRIGLITGRDSDAQKDVVQNVHLRWPAAEFEIRNC 198 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + + L E P+ DII++ARGGGS+EDL F++E +VRA++ + Sbjct: 199 AVQGPDAVPGVMK------NLAELDADPQIDIIVIARGGGSMEDLLPFSNEALVRAVSEA 252 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D + D ADLRA TPT AA+ VP +L+ A L+ + R+ Sbjct: 253 KTPVVSAIGHEADRPILDEVADLRASTPTDAAKRIVPDVAEEAMNLLRARAELDAAVNRI 312 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 I + L ++ L ++ +L + R + + NH+ ++ Sbjct: 313 IDREQEMLTAVRSRPVLAEPQTMVTAHEEQLRLVRRRSLQATTTRVMQGQTEINHLRSQA 372 Query: 358 KSDFLIHNIQK 368 +S + +++ Sbjct: 373 RSLSPLRTLER 383 Score = 97.9 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 53/159 (33%), Gaps = 5/159 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + E+ ++ + + + + +L +R + Sbjct: 273 ADLRASTPTDAAKRIVPDVAEEAMNLLRARAELDAAVNRIIDREQEMLTAVRSRPVLAEP 332 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + + ++ + R + ++ T ++ +S + TL+RGY +Q + Sbjct: 333 QTMVTAHEEQLRLVRRRSLQATTTRVMQGQTEINHLRSQARSLSPLRTLERGYAVVQSDD 392 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 I + + + G+ +A V + Sbjct: 393 GQAIRDSNEVKAGDGVHVRVAHGRFDAAVTAVQESTDSS 431 >gi|119715314|ref|YP_922279.1| exodeoxyribonuclease VII large subunit [Nocardioides sp. JS614] gi|158513099|sp|A1SFK7|EX7L_NOCSJ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|119535975|gb|ABL80592.1| Exodeoxyribonuclease VII large subunit [Nocardioides sp. JS614] Length = 411 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 99/378 (26%), Positives = 174/378 (46%), Gaps = 13/378 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + ++SL+ P V +++ + V+ L V V G+++ + +L+D + Sbjct: 1 MALESSLESPA-PVRQIANAIAGWVDR-LGAVWVEGQVAQVSRRPGLNTVFLTLRDAVAD 58 Query: 64 IDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 I + + + EG ++ K + + + + G G LL LE Sbjct: 59 ISVPVTCSRTLFDGLNPPLVEGASVVLHAKPSYYANRGTLSLYAREIRMVGLGELLARLE 118 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +R++ L EGLF+ + K P+PF+P + ++T+P A RD+L+ R+P + I Sbjct: 119 RRRQLLAAEGLFAAELKRPLPFLPGTVGLVTAPNSAAERDVLENARRRWPAVAFEIAYAA 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 +QG E+ A+ +L+ P ++I++ARGGGS+EDL F+DE ++RA+ Sbjct: 179 MQGPRSASEVIEAVERLDR------DPAVEVIVVARGGGSVEDLLPFSDEALIRAVHRIR 232 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D AD+RA TPT AA++ VP Q ++ R + R I Sbjct: 233 TPLVSAIGHEPDSPLLDLVADVRASTPTDAAKLVVPDVAEEQRNVRRARERARGALARWI 292 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ L L + L R +D+L L + R H R + Sbjct: 293 AREQAGLDGLRSRPALADPRMLLDARRDEVDQLRDRARRCLGHALDRAADDIGHHRARAR 352 Query: 359 SDFLIHNIQKNRQHILEK 376 + + +Q+ + + Sbjct: 353 ALSPLATLQRGYAVLQDA 370 Score = 97.5 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 38/102 (37%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + + +L R L H + + ++ + TL+R Sbjct: 303 RSRPALADPRMLLDARRDEVDQLRDRARRCLGHALDRAADDIGHHRARARALSPLATLQR 362 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 GY +QD + + +T +A K ++ + DG+ +A + Sbjct: 363 GYAVLQDADGHVVTSVGAVAPKQQVSVRVADGRIHATTTSTE 404 >gi|296169974|ref|ZP_06851581.1| exodeoxyribonuclease VII large subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895378|gb|EFG75084.1| exodeoxyribonuclease VII large subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 399 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 92/351 (26%), Positives = 155/351 (44%), Gaps = 12/351 (3%) Query: 23 HLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDAIIWKGTLNKIEFLP 80 + ++ L V V G+++ S + L+D + + + + Sbjct: 7 RVAGWIDR-LGTVWVEGQLAQISARPDSKTVFMVLRDPAADMSLSVTCSRDLVANAPVKL 65 Query: 81 EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNP 140 EG + +V GK + + G + + + + G G LL +++ ++ L EGLF + K P Sbjct: 66 AEGTQVVVCGKPSFYTGRGTFSLRLSEIRAVGVGELLARIDRLRRLLEAEGLFDPRLKRP 125 Query: 141 IPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNT 199 IPF+P ++ +IT A RD+ + R+P +R + VQG +I A Sbjct: 126 IPFLPNMVGLITGRASAAERDVTTVATGRWPGVRFAVRNTAVQGPNAVAQIVEA------ 179 Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYA 259 L E D+I++ARGGGS+EDL F+DE + RAIA P+ISA+GHE D L D Sbjct: 180 LYELDRHAEVDVIVVARGGGSVEDLLPFSDETLCRAIAACRTPVISAVGHEPDNPLCDLV 239 Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNS 317 ADLRA TPT AA+ VP Q + +L R + + + L + L Sbjct: 240 ADLRAATPTDAAKKVVPDTAAEQRLVEDLRRRSAQALRNWVSREQRALAQVRSRPVLAEP 299 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L+ + R + ++ + + H+ R+ + + + Sbjct: 300 LTALTARADEIHRARSAIRRDITRLAAAETDRVGHLGARLATLGPAATLAR 350 Score = 77.5 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 50/154 (32%), Gaps = 9/154 (5%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ +K +Q+ +E + ++ + + + L +R + Sbjct: 238 LVADLRAATPTDAAKKVVPDTAAEQRLVEDLRRRSAQALRNWVSREQRALAQVRSRPVLA 297 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ- 466 + I + + I ++ + V L + TL RGY +Q Sbjct: 298 EPLTALTARADEIHRARSAIRRDITRLAAAETDRVGHLGARLATLGPAATLARGYAVVQA 357 Query: 467 ---DTNNNFITQKRNLATKTRILINFFDGQANAI 497 + + TR+ + DG A+ Sbjct: 358 VPDSAAPAVLRSVADAPAGTRLRVRVADGAIAAV 391 >gi|113953310|ref|YP_731724.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CC9311] gi|123031574|sp|Q0I748|EX7L_SYNS3 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|113880661|gb|ABI45619.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. CC9311] Length = 390 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 94/314 (29%), Positives = 155/314 (49%), Gaps = 9/314 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 ++ P YSV EL+ + ++E ++ +S R GH + +L D + I A Sbjct: 2 SAESLPSYSVRELNNAIGVLLERGFAPRFVIQATVS--RPQVKKGHLWLTLSDGEASITA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + W L +++F+P +G VIGK+ + + + + + PS T+L E K + Sbjct: 60 VAWASKLKQLDFVPADGDGVTVIGKLNFWSARASLAVQVLDMRPS-LTTVLRRFETVKAQ 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 LLEEG+ +P P +AV+TS + + D+L+ R+PL +++ P+ VQG+ Sbjct: 119 LLEEGVIDPSRHRKLPAYPNRLAVLTSVPSSALADMLRTAQDRWPLSELLVVPIPVQGEV 178 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P I +L N L E D I++ARGGGS EDL F+D + R +A +P+++ Sbjct: 179 AP--IICGVL--NRLAETHHQLGLDAIVIARGGGSREDLMVFDDAEVCRKLATFPLPVVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+AD AD RA TPT A +P +E Q ++ +RL+ ++ + Sbjct: 235 GLGHEDDLTVADLVADHRAATPTAAMVTLMPSRESAQQTITQRRSRLSEYKRWRLEQANS 294 Query: 306 TLNSLLKALPNSDQ 319 L L Sbjct: 295 RLRDRHLLLDALRP 308 Score = 69.8 bits (169), Expect = 1e-09, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 16/128 (12%) Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--------------- 446 L RE + I + + + + +++ H + Sbjct: 263 LMPSRESAQQTITQRRSRLSEYKRWRLEQANSRLRDRHLLLDALRPEVTLQRRRDQWQQR 322 Query: 447 -RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 ++L++ + + L RG+ + TN I +++ ++ I DG A+ + Sbjct: 323 QQLLRALSPQRWLNRGFAMLNTTNGQPIQSINDISLNEQLQILLKDGVIQAVAKTIQANE 382 Query: 506 EQPTKKCQ 513 +K Sbjct: 383 TSNSKTSP 390 >gi|320532783|ref|ZP_08033563.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon 171 str. F0337] gi|320135003|gb|EFW27171.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon 171 str. F0337] Length = 434 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 95/369 (25%), Positives = 160/369 (43%), Gaps = 16/369 (4%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDA 66 + + + LS + V + +S V V G++ +G A+ +L+D + + Sbjct: 23 TTAENPWPLRLLSSKIDQYV-ARMSQVWVEGQVIQLSRRPGAGMAFLTLRDTDADVSMSV 81 Query: 67 IIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 I+ L + EG ++ K T + Q+ + + P G G LL +E+ Sbjct: 82 SIYARVLDAVLARTGAELSEGARVVIRAKPTFWTKRGSLQLQADDIRPVGVGDLLARIEQ 141 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 ++ L EGLF + K P+PF+P+ + ++ D+L R+P L + V V Sbjct: 142 LRRILAAEGLFDAERKRPLPFLPRKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAV 201 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG E+ AI E T + D+I++ARGGG++EDL F+DE +VRA A Sbjct: 202 QGARAVGEVTRAIQ------ELDTDAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRT 255 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHETD L D AD RA TPT AA VP L + RL +++ + Sbjct: 256 PLVSAIGHETDCPLLDLVADYRASTPTDAARRIVPDLAQETVGLDSARERLRSVLASRLD 315 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+ L + + + L + + +E + R+ + Sbjct: 316 AEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVEHRLSLAAADLRADHARLTA 375 Query: 360 DFLIHNIQK 368 + + Sbjct: 376 LSPQGVLDR 384 Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 2/135 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++ + ++ R + + + + + + R+ + Sbjct: 299 LDSARERLRSVLAS--RLDAEQAALDQLRARPVMADPTSIVRDRVIELGQARDRMRRAVE 356 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 H++ + L + + + L RGYT ++ IT ++ I G Sbjct: 357 HRLSLAAADLRADHARLTALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLAQG 416 Query: 493 QANAIVINKAPPKEQ 507 + A V+ P+ Sbjct: 417 RLVAQVVGATRPRPA 431 >gi|260592125|ref|ZP_05857583.1| exodeoxyribonuclease VII, large subunit [Prevotella veroralis F0319] gi|260536003|gb|EEX18620.1| exodeoxyribonuclease VII, large subunit [Prevotella veroralis F0319] Length = 433 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 97/510 (19%), Positives = 181/510 (35%), Gaps = 98/510 (19%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + ++ EL+ + ++ S LSH V E+S S GH Y L KD Sbjct: 1 MTTKALTLYELNALVSDVISSTLSHSYWVEAELSE--ARESRGHCYMELIEKDARGNVPI 58 Query: 62 SRIDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG- 112 +R A W +I+ G++ +++ F + I++ + P Sbjct: 59 ARAQAKCWHNVWAEIQPSFIKITGQTIHAGMKVMLLVHAQ-FHPQYGFSWIVDDINPEFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G ++ ++ ++L EG++ Q + + + IAVI+S T A D ++ Sbjct: 118 MGDMMRKRQEIIRQLKAEGVYDLQRELCLSMFAQRIAVISSETAAGYGDFCNQLLHNEFG 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 V +FP +QGD+ + I NA+ +N +E D +++ RGGG+ DL F+ Sbjct: 178 LAFHVELFPAVMQGDQVEQSIINALNLINEREED-----FDCVVIIRGGGATADLSGFDT 232 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + +AN +PII+ IGHE D ++ D + +R TPT AA + Sbjct: 233 LNLAENVANFPLPIITGIGHERDESVLDMVSFMRVKTPTAAAAYLI-------------- 278 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 L+ + R++ + ++ + R+ H Sbjct: 279 -----------------------------NQLAATLARVENAQASIVEAVQRRLEREKMH 309 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 HI I F + + + Q + + Sbjct: 310 IQHIATHIPMLFSVVR-TQQEARLDSLSQRLV-------------------------NRM 343 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 K R+ + ++ L ++ + + + + Q K L RGY+ N Sbjct: 344 KERLSKARYDLDSMMRYAIPTLVGRLSNEQRRIDMLAQRAQLMDPKLLLSRGYSITLH-N 402 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499 + L I F G+ ++V Sbjct: 403 GKAVRNASQLKAGDVITTRFEQGEVESVVK 432 >gi|145593436|ref|YP_001157733.1| exodeoxyribonuclease VII, large subunit [Salinispora tropica CNB-440] gi|145302773|gb|ABP53355.1| Exodeoxyribonuclease VII large subunit [Salinispora tropica CNB-440] Length = 417 Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 155/365 (42%), Gaps = 12/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--A 66 S + V +S + + + L V V G+++ + + +L+D + + Sbjct: 10 STPEEPWPVRVVSQKIGAWI-ARLGWVWVDGQVAQVSRRPGASTVFLTLRDPSADLSLTV 68 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + L+ EG ++ K + + + + G G LL LEK KK Sbjct: 69 TTNRDVLDAGAPQLREGARVVLHAKPHFYAARGTLSLRADEIRQVGLGELLARLEKLKKL 128 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF + K PF+P I +IT A RD+ R+P + V VQG Sbjct: 129 LAAEGLFDPRRKRRPPFLPHRIGLITGRASAAERDVRTNARRRWPAVAFRTVNVAVQGPS 188 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +I +A+ L+ P ++I++ARGGGSIEDL F+DE + RA+ P++S Sbjct: 189 AVPQIVDALRVLDA------DPTIEVIVIARGGGSIEDLLPFSDEALCRAVFGCRTPVVS 242 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHETD L DY AD+RA TPT AA+ VP + +RL + L+ + + Sbjct: 243 AIGHETDAPLLDYVADIRASTPTDAAKRVVPDLAEEVRLIGQARSRLERAVRNLVDREAH 302 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L L + + + L + L + H R+++ Sbjct: 303 RLELLRSRPVLARPEVMIEQRATDVSGLRHRADRCLAHRLTAAEDDLRHTRARLRALSPA 362 Query: 364 HNIQK 368 + + Sbjct: 363 ATLDR 367 Score = 110 bits (275), Expect = 5e-22, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 55/145 (37%), Gaps = 2/145 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + I + + +E+ V+ + + ++ + + + I T + L Sbjct: 275 LAEEVRLIGQARSRLERAVRNLVDREAH--RLELLRSRPVLARPEVMIEQRATDVSGLRH 332 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R + L+H++ + + T L++ + TL RGY ++ + + + + Sbjct: 333 RADRCLAHRLTAAEDDLRHTRARLRALSPAATLDRGYAIVRRADGKVVRAVSEVTAGDPV 392 Query: 486 LINFFDGQANAIVINKAPPKEQPTK 510 + DG+ +A V + Sbjct: 393 RVRLADGELSATVDAGEHRPATQRR 417 >gi|150009300|ref|YP_001304043.1| exodeoxyribonuclease VII large subunit [Parabacteroides distasonis ATCC 8503] gi|256841868|ref|ZP_05547374.1| exodeoxyribonuclease VII, large subunit [Parabacteroides sp. D13] gi|149937724|gb|ABR44421.1| putative exodeoxyribonuclease VII large subunit [Parabacteroides distasonis ATCC 8503] gi|256736762|gb|EEU50090.1| exodeoxyribonuclease VII, large subunit [Parabacteroides sp. D13] Length = 444 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 91/519 (17%), Positives = 184/519 (35%), Gaps = 96/519 (18%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59 M P S + S+ EL+ ++ + VR E+S R SSGH Y + Sbjct: 1 MRPNLNNLSGEKEALSLLELNTRIRGALSRAFPETCWVRAEMSDVRVNTSSGHCYLEFVE 60 Query: 60 NHSR-------IDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQII 104 +++ + IW T ++ F E G + LV + + Sbjct: 61 KNAQTGQLVAKVRGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-LSLT 119 Query: 105 IESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163 + + P+ G ++ + ++L EEG+F+ + P P +P+ IA+ITSPT A D + Sbjct: 120 VLDIDPAYTLGDMVRKRMEIIRQLQEEGVFTLNKELPFPLLPRRIAIITSPTAAGYEDFM 179 Query: 164 QRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGS 220 +++ +P +FP +QG+ + A+ ++ ++ D++++ RGGG+ Sbjct: 180 NQLTRNKGGYPFYTKLFPALMQGERTEASVIAALDRIYQHQD-----LFDVVVIIRGGGA 234 Query: 221 IEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280 DL F+ ++ A +PII+ IGHE D D DL A T Sbjct: 235 TSDLNSFDSYLLAANCAQFPLPIITGIGHERD----DTVVDLVAHTRMKTPTAVAE---- 286 Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340 L+ + + + L + L ++ + Sbjct: 287 ----------------------------FLISRMDSVGEELENLCQDVSLLAMDILSRQK 318 Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + ++ + I++NR + + + Sbjct: 319 NYL--------QLVATRFPSIVTSRIERNRSGLQTIASGLPAMASGL------------- 357 Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + ++ R+ ++ K+ + +T + ++ + LKR Sbjct: 358 ------------LSRRQSVLENTELRLRNGITSKLSEDVRFIQLTEQFIKMASPDYILKR 405 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 GY+ + I +L + F DG+ +I+ Sbjct: 406 GYSLAL-KDGKIIKHASDLRAGEELTTRFIDGEIKSIIK 443 >gi|317125807|ref|YP_004099919.1| exodeoxyribonuclease VII large subunit [Intrasporangium calvum DSM 43043] gi|315589895|gb|ADU49192.1| Exodeoxyribonuclease VII large subunit [Intrasporangium calvum DSM 43043] Length = 470 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 95/389 (24%), Positives = 171/389 (43%), Gaps = 20/389 (5%) Query: 1 MNPFSQKN--SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLK 58 M P ++ + + V LS + V+ +S + V G++ + G A+ +L+ Sbjct: 1 MGPLPERAAETTAEQPWPVRVLSLKIADYVDK-MSQLWVEGQVIQFS--PRGGTAFLTLR 57 Query: 59 DNHS----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 D + + +N + +G ++ K T + Q+ + P G G Sbjct: 58 DPDVDMSLSVSVSM--NAVNAMPIPLTQGARVVLQAKPTFWTKRGTLQLEARQIRPVGIG 115 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LR 173 LL +E K+ L EG+F K PIPF+P+ + +IT + A +D+++ R+P +R Sbjct: 116 DLLARVEILKRTLAAEGVFDADRKKPIPFLPQRVGLITGRSSAAEKDVVENARRRWPAVR 175 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 I V VQG E+ A L + P D+I++ARGGG++E+L F++E ++ Sbjct: 176 FEIREVAVQGSTAVTEVCAA------LVDLDAHPEVDVIVIARGGGALEELLPFSNEAMI 229 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 RA+A + P+ISAIGH+ D L D AD RA TPT A + VP + + RL Sbjct: 230 RAVAAARTPVISAIGHDVDQPLLDLVADWRASTPTDAGKKVVPDAARETALVTAGRDRLR 289 Query: 294 NIIIRLIKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 + R ++ + L + + R ++ L +E + R Sbjct: 290 LALGRRVEVERRGLRSLLSRPVLADPVAQVRVRRTEIEALRGRAAVRMEGRLTRAGDQVE 349 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHI 380 H++ ++ + + + + + I Sbjct: 350 HLLRQVAALSPQSTLDRGYAVVQHRDGRI 378 Score = 90.2 bits (222), Expect = 8e-16, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 3/157 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 R+ L + R + + + + ++ T I+ L R Sbjct: 273 DAARETALVTAGRDRLRLALGRRVEVERRGLRSLLSRPVLADPVAQVRVRRTEIEALRGR 332 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + ++ V R + + + ++TL RGY +Q + + + ++ + Sbjct: 333 AAVRMEGRLTRAGDQVEHLLRQVAALSPQSTLDRGYAVVQHRDGRIVMDQDDVGIGELLR 392 Query: 487 INFFDGQANAI-VINK--APPKEQPTKKCQLHNNKRE 520 + G V + PP+ + + R Sbjct: 393 VRVARGDFGVRPVTDGVDTPPERDAPARGRFPAGSRT 429 >gi|87301423|ref|ZP_01084264.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 5701] gi|87284391|gb|EAQ76344.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 5701] Length = 400 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 85/361 (23%), Positives = 161/361 (44%), Gaps = 12/361 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDN 60 + + P YSVS+L+ + ++E + +S R GH + +L D Sbjct: 11 ELAADASGQPLPRYSVSDLNRSIGSLLERGFAPRFLLEATVS--RPQLKKGHLWMTLLDE 68 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + I A++W L ++ F P +G +V+GK+ + + + + PS ++L Sbjct: 69 TASISAVVWASALPRLSFTPADGDGVIVVGKLNFWGARASLCVQALDVRPS-LSSVLRQF 127 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ +++L GLF K P+P P +IA++TS + + D+L+ + R+P ++++ P+ Sbjct: 128 ERVRERLEGSGLFDPSSKRPLPEFPTVIALLTSSPSSALADMLRTAAERWPATKILVVPI 187 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG I A+ + + + ++LARGGGS EDL F+ E + + Sbjct: 188 PVQG-AVQTSICTALELV---GQAAGRLGIEAVVLARGGGSREDLAVFDSEEVALTLGAL 243 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 ++P+++ +GHE D T+AD AD RA TPT A +P + L+ L + L + Sbjct: 244 NLPVVTGLGHEDDTTIADLVADYRAATPTAAIVALLPDRRTLRQELRQRQELLRQTLRWR 303 Query: 300 IKYK--INTLNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + + + L R R + ++ R + + Sbjct: 304 VDREQQQLVVQRQRLLQHHPQALLQRYRTQLQQRRQLLEALSPRQLLKRGFCLVRGEAGQ 363 Query: 357 I 357 + Sbjct: 364 L 364 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 44/116 (37%), Gaps = 12/116 (10%) Query: 405 LREQTKNRIFYLHTHIKKLITR------------IEFILSHKIKSCHTSVSITTRILQSF 452 LR++ + R L ++ + R ++ ++ T + ++L++ Sbjct: 285 LRQELRQRQELLRQTLRWRVDREQQQLVVQRQRLLQHHPQALLQRYRTQLQQRRQLLEAL 344 Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 + + LKRG+ ++ + + + + + DG A+ V+ + P Sbjct: 345 SPRQLLKRGFCLVRGEAGQLLRSIEQVEVGQGLRVQWLDGTADVRVLERRHENPDP 400 >gi|317490630|ref|ZP_07949100.1| exonuclease VII [Eggerthella sp. 1_3_56FAA] gi|316910254|gb|EFV31893.1| exonuclease VII [Eggerthella sp. 1_3_56FAA] Length = 388 Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats. Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 13/364 (3%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 SVS K +E V + GE+S YF++KD + + ++W Sbjct: 34 LSVSGAMALAKGALEGV--TVRLVGEVSEVSNKPGYKAVYFTVKDQRAALPCMMWNNRFQ 91 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 G + G+ T + + + S+ +G G L + +KL EGL + Sbjct: 92 ASGVRLAVGQLVELTGRFTLYAPKGRMNFDVFSIALAGEGNLRMQVANLARKLEAEGLMA 151 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANA 193 K P+P P ++ ++TSP GA + D+L+ + RFPL RV++ V V+G P I Sbjct: 152 PARKRPVPAYPALVGLVTSPRGAAVHDVLRTLRRRFPLARVLVAGVAVEGSNAPAGIVEG 211 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 + + +++++ RGGGS EDL FNDE + R IA +P+++ IGHE D Sbjct: 212 MRAVVRA-------GAEVVLVVRGGGSFEDLMPFNDEGLARMIAKCPVPVVTGIGHEPDT 264 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 ++AD ADLRA TPT AAE P +E L + L + R + + Sbjct: 265 SIADMVADLRASTPTAAAEAVSPARESLGRLFEARSSSLRASMSRALDRAGAEVRRCATR 324 Query: 314 LPNSDQTL--SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 D L + LD L L + R R+ + L ++ ++R Sbjct: 325 PLFCDAQLLYATEAQMLDLASDRLFRALPANLARDEASVARQRERL-ACALPASLDRSRT 383 Query: 372 HILE 375 + Sbjct: 384 RLEH 387 >gi|329770466|ref|ZP_08261845.1| exodeoxyribonuclease VII [Gemella sanguinis M325] gi|328836321|gb|EGF85987.1| exodeoxyribonuclease VII [Gemella sanguinis M325] Length = 419 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 105/346 (30%), Positives = 185/346 (53%), Gaps = 17/346 (4%) Query: 11 DHPEYSVSELSYHL--KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 + +V+ L+ ++ K I++ L + ++GEIS ++ +H++ + YFS+KD ++RI+A+ Sbjct: 3 ERAYLTVTALNKYIEKKFILDPYLGEIYIKGEISNFK-LHNNNNIYFSIKDENTRINAVW 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 + ++G L+ KI + ++ +++ + G L + K+KL Sbjct: 62 FGAKNR----EFKDGDTVLIKSKINFYFPRGEHNLLVIDMKKDRIGELYQKFLELKEKLE 117 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECP 187 +EGLFS + K IP + IA+IT+ TGA I+D+ + I RFP+ ++ ++ VQG+ Sbjct: 118 KEGLFSSEFKKDIPKFSQKIALITAKTGAAIQDMTRTIQRRFPIAKINVYSTLVQGENSV 177 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 ++I I+ ++ D+IIL RGGGSIEDLW FN E +VRAI N PI++ I Sbjct: 178 EDIVKNIILADS-------EDNDVIILGRGGGSIEDLWSFNTEEVVRAIFNCKTPIVTGI 230 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GHETD TL+D+ +D+RA TPT AAE+ P +++ L +LN + +++ + Sbjct: 231 GHETDTTLSDFVSDVRASTPTAAAELVTPNIIDIKNRLSFNSDKLNRRMSYILEEYRTRI 290 Query: 308 NSLLK--ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 + N + + ++ L +EL L ++ K Sbjct: 291 ANSNSNPYFRNYTNIYNIYKEKVCLLEKELSKGLNNLLKDKKSELT 336 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 59/183 (32%), Gaps = 26/183 (14%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + ++ +++ + +I++ + + + R + +E + Sbjct: 232 HETDTTLSDFVSDVRASTPTAAAELVTPNIIDIKNRLSFNSDKLNRRMSYILEEYRTRIA 291 Query: 404 MLREQT-----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI---------- 448 N + L + L++ +K + ++I+ I Sbjct: 292 NSNSNPYFRNYTNIYNIYKEKVCLLEKELSKGLNNLLKDKKSELTISKEIFQKIDVIGPY 351 Query: 449 ----------LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 L++ + N LK+GY+ +N IT +++ I + DG V Sbjct: 352 KEYFIKKVDSLEANSPINILKKGYSITYLNDNK-ITSVKSVNKNDNIFVRLSDGLLECNV 410 Query: 499 INK 501 I+ Sbjct: 411 IDT 413 >gi|326331015|ref|ZP_08197314.1| exodeoxyribonuclease VII, large subunit [Nocardioidaceae bacterium Broad-1] gi|325951226|gb|EGD43267.1| exodeoxyribonuclease VII, large subunit [Nocardioidaceae bacterium Broad-1] Length = 410 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 95/366 (25%), Positives = 170/366 (46%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA- 66 ++ V +++ + ++ L V V G+++ + +L+D+ + I Sbjct: 4 DTSPESPAPVRQIANAIGGWIDK-LGAVWVEGQVAQLSRRPGMQTVFLTLRDSVADISVP 62 Query: 67 -IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + L+ + EG ++ K + + + + P G G LL LE+R++ Sbjct: 63 VTCTRFLLDSLNPPLVEGASVIIHAKPSYYANRGTLSLQARDIRPVGLGELLARLEQRRQ 122 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ + K P+PF+P + ++T+ A RD+L+ R+P +R + +QG Sbjct: 123 LLAAEGLFAAELKRPLPFLPTKVGLVTAANSAAERDVLENARRRWPQVRFEVAYAAMQGS 182 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ + +L+ P D+I++ARGGGS+EDL F+DE ++RA+ + PI+ Sbjct: 183 RSAADVVEKLQRLDR------DPEVDVIVVARGGGSVEDLLPFSDEHLIRAVHAARTPIV 236 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D AAD+RA TPT AA++ VP Q + RL I LI + Sbjct: 237 SAIGHEPDSPLLDLAADVRASTPTDAAKLVVPDVVEEQRIVATGRDRLRGGIAALIHREQ 296 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L++L L + + R + L + + R H R ++ Sbjct: 297 TLLDALRSRPVLADPRSLIDARRDEVTSLRDRARRTVGHALDRAADDIGHHRARARALSP 356 Query: 363 IHNIQK 368 + +++ Sbjct: 357 LETLRR 362 Score = 98.3 bits (243), Expect = 3e-18, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 6/136 (4%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ------TKNRIFYLHTHIKKLITRIEFI 430 +Q I + LR + L ++ I + L R Sbjct: 273 EQRIVATGRDRLRGGIAALIHREQTLLDALRSRPVLADPRSLIDARRDEVTSLRDRARRT 332 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + H + + ++ + TL+RGY QD + + +T + + I Sbjct: 333 VGHALDRAADDIGHHRARARALSPLETLRRGYAVAQDADGHVLTSVTDATEGAAVSIRLA 392 Query: 491 DGQANAIVINKAPPKE 506 DG+ A + + Sbjct: 393 DGRLAATITSTEKDPA 408 >gi|224282537|ref|ZP_03645859.1| exodeoxyribonuclease VII large subunit [Bifidobacterium bifidum NCIMB 41171] gi|313139691|ref|ZP_07801884.1| exonuclease VII [Bifidobacterium bifidum NCIMB 41171] gi|313132201|gb|EFR49818.1| exonuclease VII [Bifidobacterium bifidum NCIMB 41171] Length = 431 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 164/372 (44%), Gaps = 15/372 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + VS LS VE + G+I+ + G AY +++D Sbjct: 30 PRLAAETTADNPWPVSVLSQKFHTAVER-WPAAWIAGQITEINTRRA-GSAYLTVRDDVE 87 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT-LLTA 119 I W+ +K ++G +V GK + ++ I + + GSG L Sbjct: 88 DIAISVSGWRAFASKAA-SFKQGDRVVVHGKADIWVKQTRLSFIGDDIRKIGSGGGLKEQ 146 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +++ + KL EGLF K P+P P I +I +P D++ + R+P +R I Sbjct: 147 IDQLRMKLKGEGLFDADRKLPLPEFPSCIGLICAPHARAEGDVITNVRLRWPTVRFNIVH 206 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQG +CP+ I AI +L+ P D+II+ARGGGS EDL F+DE +VRA A Sbjct: 207 AFVQGPQCPQSIVEAIHRLDA------DPDVDVIIVARGGGSFEDLIGFSDEAVVRATAG 260 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 PI+SAIGHE DWTL D AADLRA TPT AA+ VP + N R+ I Sbjct: 261 CETPIVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAIDRMRMRIDA 320 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + +I + L L + +D R ++ L I+ + Sbjct: 321 RVGNEIRLVEGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHAS 380 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 381 LTALSPQSTLDR 392 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 48/160 (30%), Gaps = 7/160 (4%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ +K + E+ Q I + +R + L Sbjct: 271 HEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAI-DRMRMRIDARVGNEIRLV 329 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 Q + + R++ L+ + +V L + + ++T Sbjct: 330 EGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHASLTALSPQST 389 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 L RGY +Q+ + + I + + + G A Sbjct: 390 LDRGYAVVQNADGHVIDDAGKVGAGDHLTLTLRKGVITAT 429 >gi|254431781|ref|ZP_05045484.1| exodeoxyribonuclease VII, large subunit [Cyanobium sp. PCC 7001] gi|197626234|gb|EDY38793.1| exodeoxyribonuclease VII, large subunit [Cyanobium sp. PCC 7001] Length = 407 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 11/335 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDN 60 +P S + P YSVS L+ L ++E + +S R GH + +L D Sbjct: 14 SPASPSGAHSLPRYSVSSLNAALGSLMERGFAPRFLLDATVS--RPQLKKGHLWMTLVDE 71 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + I A++W K+ P EG +V+GK+ + + + + L PS +++ Sbjct: 72 QASISAVVWASQRQKLSMEPAEGDGVVVVGKLNFWAARASLCVQVLDLRPS-LSSVMRRF 130 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ +L EGLF K +P P+ IA++TS + + D+L+ + R+P RV++ P+ Sbjct: 131 EQVYGQLAAEGLFEPSRKRALPHAPQRIALLTSAPSSALADMLRTAAERWPSTRVLVVPI 190 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + A L L + ++LARGGGS EDL F+ + R +A + Sbjct: 191 PVQGAVEAQICAT----LQRLYGRCHAEGIEALVLARGGGSREDLAVFDGATLGRVLAQA 246 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P++S IGHE D T+AD AD RA TPT A +P ++ ++ L L L ++ Sbjct: 247 PVPVVSGIGHEDDTTIADLVADYRAATPTAALVALLPERQAVRHGLQQLRRHLVQLVALR 306 Query: 300 IKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLP 332 + + L + L L R L++ Sbjct: 307 LHGERQQLGRFQERLQQLRPRDLLQQRRQSLEQAR 341 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 51/132 (38%), Gaps = 6/132 (4%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + + + ++ + ++ + + ++ +++L R ++ Sbjct: 281 LLPERQAVRHGLQQLRRHLVQLVALRLHGERQQLGRFQERLQQLRPR------DLLQQRR 334 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 S+ +L++ + + L+RG+ I+ + + L + + + DGQA+A+V Sbjct: 335 QSLEQARALLRALSPEQVLQRGFALIRSPDGQVVRSVAALKPEEPVQLVLADGQADALVR 394 Query: 500 NKAPPKEQPTKK 511 P P + Sbjct: 395 EIHPGAPLPAAE 406 >gi|78213832|ref|YP_382611.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CC9605] gi|78198291|gb|ABB36056.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. CC9605] Length = 399 Score = 210 bits (535), Expect = 4e-52, Method: Composition-based stats. Identities = 95/337 (28%), Positives = 164/337 (48%), Gaps = 9/337 (2%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKD 59 + P + ++ P YSV+EL+ + ++E + +S R GH + +L D Sbjct: 7 VTPTAVLSADRLPSYSVAELNTAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLTD 64 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + I ++W L ++ + P++G V+GK+ + + + + PS T+L Sbjct: 65 GSASISGVVWASKLAQLSYQPKDGDGVTVVGKLNFWAARASLTVQALDIRPS-LSTVLRD 123 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178 E+ ++ L +EG+ P+P P IAV+TS + + D+L+ + R+PL ++I+ P Sbjct: 124 FERVRQVLEQEGVIDPSRLRPLPSQPASIAVLTSVPSSALADMLRTAAERWPLTQLIVVP 183 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 + VQG P I L + E ++LARGGGS EDL F++E + R +AN Sbjct: 184 IPVQGSVAPTII----NTLEAIAERTAELGLQALVLARGGGSREDLAVFDNEALCRLLAN 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 IP+++ +GHE D T+AD AD RA TPT A +P +E + L ++RL + ++ Sbjct: 240 YPIPVVTGLGHEDDLTVADLVADHRAATPTAAIVALLPDREAERQGLTQRQSRLKDTLLG 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 I + L AL R R + + + Sbjct: 300 RILRERQRLQDRAVALQQQSPREKIMRKRQELIQKHQ 336 Score = 90.2 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 1/120 (0%) Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRIL 449 E++ L++ RI ++ ++ KI + ++L Sbjct: 279 REAERQGLTQRQSRLKDTLLGRILRERQRLQDRAVALQQQSPREKIMRKRQELIQKHQLL 338 Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509 ++ + + LKRG I + + I ++ ++ I DG A V P T Sbjct: 339 KALSPERWLKRGLALISNKAGDPIPGLESVKIGDQLNIRMSDGSLEARVDQIQPSAPNTT 398 >gi|81299179|ref|YP_399387.1| exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC 7942] gi|81168060|gb|ABB56400.1| Exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC 7942] Length = 450 Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats. Identities = 116/374 (31%), Positives = 196/374 (52%), Gaps = 15/374 (4%) Query: 16 SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWKG 71 SV+ +S +L+ ++ + L + + GE+S + H+ G +FSLKD+ + +D ++WK Sbjct: 49 SVAGVSDYLESLIGEDVRLRQLWIFGEVSSCK-PHAVG-LFFSLKDSQTTDLLDCVVWKN 106 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L +++ PE G + L++G + + S YQ+ + +P G G +K +++L EG Sbjct: 107 GLAQLQHRPEIGQQVLLLGTVRLYRKRSGYQLQVVQCLPFGDGLKALQRQKLEQRLQAEG 166 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF K P+P P+ IAV+TSP A DI + + R P L+V++ P VQGD+ P I Sbjct: 167 LFDRDRKRPLPLYPQTIAVVTSPQAAAWGDIQRSLRQRSPGLKVLLSPTLVQGDQAPAAI 226 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI ++ R +++ILARGGG+ EDL F+DE +VRAIA IP+++ +GHE Sbjct: 227 ATAIARVVA------DGRAELLILARGGGAREDLECFDDEQVVRAIATCPIPVVTGLGHE 280 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD AD A TPT AA +VP L+ + L RL + + + L Sbjct: 281 QDETLADRVADWAAHTPTAAAIRSVPAWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHC 340 Query: 311 LKALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + L ++++ L + L+ + + ++ +H +H+ + +Q+ Sbjct: 341 QTRLGWPLLQRRLQQAQHQQQSLRQRLQQASRLQLAQERQHLDHLQELLAILNPESVLQR 400 Query: 369 NRQHILEKQQHIEQ 382 + + I+Q Sbjct: 401 GYALVRRDRTLIQQ 414 Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 3/147 (2%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + RQ + +Q + +Q + + + L Q + + + Sbjct: 307 AWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHCQTRLGWPLLQRRLQQAQHQQQSLRQR 366 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + ++ + +L ++ L+RGY ++ + I Q ++L R Sbjct: 367 L--QQASRLQLAQERQHLDHLQELLAILNPESVLQRGYALVRR-DRTLIQQVQDLQVGDR 423 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKK 511 + + + DG A V E + + Sbjct: 424 LSLQWADGTAGVCVETVTAAVENQSDR 450 >gi|84494717|ref|ZP_00993836.1| exodeoxyribonuclease VII large subunit [Janibacter sp. HTCC2649] gi|84384210|gb|EAQ00090.1| exodeoxyribonuclease VII large subunit [Janibacter sp. HTCC2649] Length = 414 Score = 209 bits (533), Expect = 6e-52, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 161/371 (43%), Gaps = 12/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P ++ + V LS + V+ +S + V G++ + AY +L+D Sbjct: 11 PERAGDTTAEQPWPVRLLSMKIAEYVDK-MSTLWVEGQVVQLNRRPGARTAYLTLRDPDV 69 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + I L+ + EG +V K T + + + P G G LL + Sbjct: 70 DMSLSVAIQVNALDAMGTPLTEGSRVVVQAKPTFWTQRGSLMLDGRQIRPVGVGELLARI 129 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E K+ L EGLF K P+PF+P+ I +I A +D+++ R+P + I V Sbjct: 130 EYLKRNLASEGLFDADRKRPLPFLPRRIGLICGRASAAEKDVVENSRRRWPTAQFEIRQV 189 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG E+ A L E P D+I++ARGGG++EDL F++E ++RA+A + Sbjct: 190 AVQGANAVTEVTAA------LSELDGIPDVDVIVIARGGGNVEDLLPFSNEALIRAVAAA 243 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGH+ D L D AD RA TPT AA+ VP + + R + Sbjct: 244 RTPVVSAIGHDVDSPLLDLVADHRASTPTDAAKAIVPDADREHQVIEAARTRGRRALEGR 303 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + ++ L L L + + R + L H + + R H+ ++ Sbjct: 304 LHHERRRLVELRSRPVLADPAAFVRVQREVVLALRARARHRTQAQLHRHQDGVAHLRAQV 363 Query: 358 KSDFLIHNIQK 368 ++ + + Sbjct: 364 RTLSPQSTLDR 374 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 38/131 (29%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R+H + + R ++ + + + L R Sbjct: 284 REHQVIEAARTRGRRALEGRLHHERRRLVELRSRPVLADPAAFVRVQREVVLALRARARH 343 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 ++ V+ +++ + ++TL RGY +Q + + LA K + + Sbjct: 344 RTQAQLHRHQDGVAHLRAQVRTLSPQSTLDRGYAIVQRVDGAIVHDPDELAIKELLHVTV 403 Query: 490 FDGQANAIVIN 500 G Sbjct: 404 ARGDFGVRTEG 414 >gi|322387926|ref|ZP_08061533.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC 700779] gi|321141199|gb|EFX36697.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC 700779] Length = 216 Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats. Identities = 91/217 (41%), Positives = 130/217 (59%), Gaps = 11/217 (5%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+ + I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDRAVIQATIW 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G K+ F EEG++ VIG++ + S Y IIIE P G G L E+ KKKL E Sbjct: 60 SGIYQKLGFDLEEGMKINVIGRVQVYEPSGSYSIIIEKAEPDGVGALAIQFEQLKKKLSE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF ++ K IP K I V+TSP+GAVI+DI+ +S RFP + ++++P KVQG+ + Sbjct: 120 EGLFQERFKQAIPQFAKRIGVVTSPSGAVIQDIITTVSRRFPGVEIVLYPTKVQGEGAAE 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 EIA I + N ++ D++I+ RGGGSIEDLW Sbjct: 180 EIARNIARANERED------LDVLIIGRGGGSIEDLW 210 >gi|67925867|ref|ZP_00519156.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501] gi|67852289|gb|EAM47759.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501] Length = 384 Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats. Identities = 117/314 (37%), Positives = 179/314 (57%), Gaps = 13/314 (4%) Query: 8 NSLDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR-- 63 N + SV L+ +++ ++E + L V V GE+S + H+ G +F+L D+ + Sbjct: 2 NRIPETTLSVRGLTEYIQLLLEDDPQLIQVWVSGEVSSLKV-HTVG-LFFTLSDSEGKTT 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +IW ++++ LP+ G E LV G I +P +YQ+ + ++ +G G ++ Sbjct: 60 LKCVIWNSQKSRLQELPKLGAEILVKGNIRLYPKKGEYQLTVFEVLATGDGLQALRYQQL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K +L +EGLF K +P P+IIAVIT+ T A DI + +S R P ++V+ P VQ Sbjct: 120 KTRLAKEGLFDQSIKRSLPSFPQIIAVITATTAAAWGDIQKTLSRRNPGVKVLFSPATVQ 179 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + P I A+ ++N R ++IILARGGG++EDL+ FNDE +VRAIA S IP Sbjct: 180 GKDAPSSIVKAMERVN------NDGRAELIILARGGGAVEDLFCFNDERVVRAIAESPIP 233 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +I+ IGH+ D TLAD AD+ A TPT AAEMAVP E L+ + RL I + +K Sbjct: 234 VITGIGHQRDETLADLVADVNAHTPTAAAEMAVPSYEVLKIEHQQRKQRLIASIQQRLKQ 293 Query: 303 KINTLNSLLKALPN 316 + L+ L L + Sbjct: 294 DLEQLDGLKNRLKS 307 Score = 87.9 bits (216), Expect = 3e-15, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 2/107 (1%) Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--RILQSFAY 454 E L + R+ + L R++ I + + + + L++ Sbjct: 275 EHQQRKQRLIASIQQRLKQDLEQLDGLKNRLKSIPLNAVSIREAKIKTLMLKQKLKALDP 334 Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 L+RG++ ++ + + L + ++I G V Sbjct: 335 HAVLERGFSVVRQIDEEIVRDVEQLNEEQELIIQLAQGSIKVKVTEI 381 >gi|88807160|ref|ZP_01122672.1| Exonuclease VII, large subunit [Synechococcus sp. WH 7805] gi|88788374|gb|EAR19529.1| Exonuclease VII, large subunit [Synechococcus sp. WH 7805] Length = 382 Score = 209 bits (533), Expect = 7e-52, Method: Composition-based stats. Identities = 94/315 (29%), Positives = 147/315 (46%), Gaps = 9/315 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 N+ P YSV EL+ + ++E V G S R GH + +L D ++ I Sbjct: 2 NADSIPSYSVQELNASVGALLERGFAPRFLVHG--SALRPQIKKGHLWLTLSDGNASITV 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + W L ++ F+P EG V+GK+ + + I L PS T+ E K Sbjct: 60 VCWASRLQQLNFVPAEGEGVTVVGKLNFWATRASLAIQAIDLRPS-RSTIERRFEAVKAV 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L +EGL + + +P P+ IA++TS + + D+L+ R+PL +++ P+ VQG+ Sbjct: 119 LSKEGLINPSRRRALPPAPERIALLTSVPSSALADMLRTARERWPLTELLVIPIPVQGEV 178 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 P+ A L + + I+LARGGGS EDL F+DE + R +A +P+++ Sbjct: 179 GPRICAVLE----RLADQIEALHVNAIVLARGGGSREDLMVFDDEALCRTLAQYPVPVVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+AD AD RA TPT A +P + L +L + + Sbjct: 235 GLGHEDDLTVADLVADFRAATPTAAIVTLLPNRNAALQYLNQCRTQLVQYQTWRLNREQE 294 Query: 306 TLNSLLKALPNSDQT 320 L AL D Sbjct: 295 RLAQRRMALTRFDPI 309 Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 10/111 (9%), Positives = 35/111 (31%), Gaps = 23/111 (20%) Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRIL-----------------------QSFAY 454 ++ + T++ + ++ ++ L Q+ + Sbjct: 272 QYLNQCRTQLVQYQTWRLNREQERLAQRRMALTRFDPIAVVADRRNRLDQRRRLLQALSP 331 Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + L RG+ ++ D+ + + ++I+ DG+ + + Sbjct: 332 ERWLARGFATVTDSEGRLLQSVAEASPSQPLVIHLSDGEIDVSTVEVRSRP 382 >gi|56751154|ref|YP_171855.1| exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC 6301] gi|56686113|dbj|BAD79335.1| exodeoxyribonuclease VII large subunit [Synechococcus elongatus PCC 6301] Length = 444 Score = 209 bits (532), Expect = 8e-52, Method: Composition-based stats. Identities = 114/360 (31%), Positives = 191/360 (53%), Gaps = 15/360 (4%) Query: 16 SVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWKG 71 SV+ +S +L+ ++ + L + + GE+S + H+ G +FSLKD+ + +D ++WK Sbjct: 49 SVAGVSDYLESLIGEDVRLRQLWIFGEVSSCK-PHAVG-LFFSLKDSQTTDLLDCVVWKN 106 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L +++ PE G + L++G + + S YQ+ + +P G G +K +++L EG Sbjct: 107 GLAQLQHRPEIGQQVLLLGTVRLYRKRSGYQLQVVQCLPFGDGLKALQRQKLEQRLQAEG 166 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 LF K P+P P+ IAV+TSP A DI + + R P L+V++ P VQGD+ P I Sbjct: 167 LFDRDRKRPLPLYPQTIAVVTSPQAAAWGDIQRSLRQRSPGLKVLLSPTLVQGDQAPAAI 226 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A AI ++ R +++ILARGGG+ EDL F+DE +VRAIA IP+++ +GHE Sbjct: 227 ATAIARVVA------DGRAELLILARGGGAREDLECFDDEQVVRAIATCPIPVVTGLGHE 280 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TLAD AD A TPT AA +VP L+ + L RL + + + L Sbjct: 281 QDETLADRVADWAAHTPTAAAIRSVPAWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHC 340 Query: 311 LKALPNS--DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + L ++++ L + L+ + + ++ +H +H+ + +Q+ Sbjct: 341 QTRLGWPLLQRRLQQAQHQQQSLRQRLQQASRLQLAQERQHLDHLQELLAILNPESVLQR 400 Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 10/97 (10%), Positives = 29/97 (29%), Gaps = 2/97 (2%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + RQ + +Q + +Q + + + L Q + + + Sbjct: 307 AWTELRQAWQQLRQRLIHAQRQQWQDYRRQLQHCQTRLGWPLLQRRLQQAQHQQQSLRQR 366 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 + ++ + +L ++ L+RG Sbjct: 367 L--QQASRLQLAQERQHLDHLQELLAILNPESVLQRG 401 >gi|297559109|ref|YP_003678083.1| exodeoxyribonuclease VII large subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843557|gb|ADH65577.1| exodeoxyribonuclease VII, large subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 410 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 167/366 (45%), Gaps = 14/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65 +S V + + + L + V G+I+ AY +L+D + + Sbjct: 4 DSSAEAPQPVRVVLNAVGQWI-GRLGRIWVEGQIAELNRRGR--MAYITLRDPVANVSVR 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + L+ PE G +V K + + + + G G LL LE+ ++ Sbjct: 61 VVCQTSVLDAQSPPPEPGARVVVHAKPDFYEVRGTFSLRALEIRHVGLGELLARLEQLRR 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF K P+PF+P + +I A RD+L+ R+P +R + PV VQGD Sbjct: 121 TLTAEGLFDAARKRPLPFLPNTVGLICGRDSAAERDVLENGRRRWPAVRFEVRPVAVQGD 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 +E+ A LK+ + P D+I++ARGGGS+EDL F+DE +VRA+A++ P++ Sbjct: 181 RAVREVTEA------LKDLDSHPDVDVIVIARGGGSLEDLLPFSDEALVRAVASAGTPVV 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L D+ AD+RA TPT AA+ +P + L R ++ ++ ++ Sbjct: 235 SAIGHEQDAPLLDHVADVRASTPTDAAKKTIPDVGEQLEIIRQLRDRGRRVLRGGVEREL 294 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L + L + + + ++ L +L + + R H R+ + Sbjct: 295 AWLEGVRSRPALASPVREVDRLAEQVADLRDRARRSLTVSLDRSADGLGHTRARLHALSP 354 Query: 363 IHNIQK 368 + + Sbjct: 355 ATTLAR 360 Score = 93.3 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 5/156 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410 +++ +K + E+ + I Q+ + R + + ++A L +R + Sbjct: 250 ADVRASTPTDAAKKTIPDVGEQLEIIRQLRDRGRRVLRGGVERELAWLEGVRSRPALASP 309 Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + L + L R L+ + + T L + + TL RGY +Q + Sbjct: 310 VREVDRLAEQVADLRDRARRSLTVSLDRSADGLGHTRARLHALSPATTLARGYAIVQRED 369 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + R + + F + A V + Sbjct: 370 GSVVRSAREPDAGESLRVRFAEDSLTATVESVHTED 405 >gi|124007172|sp|Q6ADU9|EX7L_LEIXX RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 435 Score = 209 bits (531), Expect = 1e-51, Method: Composition-based stats. Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 14/385 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + + V+ L+ ++ +E L V GEI+ + S G+ Y LKD Sbjct: 15 MAPGPPTLDDPWPVALLASKIRGWIER-LGTAWVEGEITQWGV--SGGNVYGKLKDLNED 71 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + IW +I ++G + K + + + + G G LL LE Sbjct: 72 ATVGFTIWSSVKARIPADLKQGDRVIAAVKPNYWLKGGTLTMQVSDMRHVGLGDLLERLE 131 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + + +L EGLF + K +PF+P I ++T +D+L+ R+P +R Sbjct: 132 RLRAQLRAEGLFRPERKKRLPFLPHTIGLVTGKDSDAEKDVLRNAQLRWPQVRFRTVYAA 191 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD E+ A L+E P ++II+ARGGG ++L F+DE ++RA A S Sbjct: 192 VQGDRTVPEVTAA------LRELDADPEVEVIIVARGGGDFQNLLGFSDESLLRAAAGLS 245 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D ADLRA TPT AA+ VP + AR+ + +I Sbjct: 246 TPLVSAIGHEADRPLLDEVADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHII 305 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 +++I+ + L L + + L R +E + R+ + +++ Sbjct: 306 RHEIDRIGHLRTRPALASGSWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLR 365 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQI 383 + +++ + + Sbjct: 366 ALSPQATLERGYAIVQNAAGRVVAA 390 Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 5/169 (2%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410 +++ ++ + E+ + Q + + + +I + LR + Sbjct: 265 ADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHIIRHEIDRIGHLRTRPALASG 324 Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + + + + R ++ + V+ L++ + + TL+RGY +Q+ Sbjct: 325 SWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLRALSPQATLERGYAIVQNAA 384 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518 + T + I G A P Q L + Sbjct: 385 GRVVAAPGEAPAGTELRITVSGGSLAATAGKALPSPAQGATNGSLAAPR 433 >gi|126661055|ref|ZP_01732139.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. CCY0110] gi|126617666|gb|EAZ88451.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. CCY0110] Length = 384 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 119/317 (37%), Positives = 177/317 (55%), Gaps = 13/317 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70 SV+ L+ ++K ++E + L V V GE+S H G +F+L D+ + I ++W Sbjct: 9 LSVTGLTEYIKLLLEEDPQLIQVWVTGEVSSL-HEHRVG-LFFTLSDSQGQATIKCVVWN 66 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ LP+ G E LV+G + + +YQ+ + ++ +G G ++ K +L E Sbjct: 67 SQKERLLELPKLGSEILVMGNVRLYAKKGEYQLTVSQVLATGEGLQALRYQQLKNRLASE 126 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF K +P PKIIAV+T+ T A DI + +S R P ++V+ P VQG E P Sbjct: 127 GLFEKHLKRSLPSFPKIIAVVTATTAAAWGDIQKTLSHRNPGVKVLFSPATVQGKEAPSS 186 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++N R ++IILARGGG++EDL+ FNDE +VRAI+ SSIPII+ IGH Sbjct: 187 IVKAIERVN------IDGRAELIILARGGGAVEDLFCFNDERVVRAISVSSIPIITGIGH 240 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D TLAD AD+ A TPT AAEMAVP E + + RL + + ++Y+ + L S Sbjct: 241 QRDETLADLVADVNAHTPTAAAEMAVPSYEVMLIEHQQRKERLVASLKQRLRYESDQLAS 300 Query: 310 LLKALPNSDQTLSCSRY 326 L L N + R Sbjct: 301 LKNRLKNLSVNAASIRE 317 Score = 90.6 bits (223), Expect = 7e-16, Method: Composition-based stats. Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 2/122 (1%) Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + + + E L K R+ Y + L R++ + + Sbjct: 260 AAAEMAVPSYEVMLIEHQQRKERLVASLKQRLRYESDQLASLKNRLKNLSVNAASIREAR 319 Query: 442 VSITT--RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 V L++ LKRG++ ++ T+ I L + I G V Sbjct: 320 VKTLMLKEKLEALDPHAVLKRGFSVVRQTDGEIIRDSNQLIEGQELTIQLPQGTIKIKVT 379 Query: 500 NK 501 Sbjct: 380 EI 381 >gi|50955264|ref|YP_062552.1| exodeoxyribonuclease VII large subunit [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951746|gb|AAT89447.1| exodeoxyribonuclease VII large subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 459 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 97/385 (25%), Positives = 167/385 (43%), Gaps = 14/385 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + + V+ L+ ++ +E L V GEI+ + S G+ Y LKD Sbjct: 39 MAPGPPTLDDPWPVALLASKIRGWIER-LGTAWVEGEITQWGV--SGGNVYGKLKDLNED 95 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + IW +I ++G + K + + + + G G LL LE Sbjct: 96 ATVGFTIWSSVKARIPADLKQGDRVIAAVKPNYWLKGGTLTMQVSDMRHVGLGDLLERLE 155 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + + +L EGLF + K +PF+P I ++T +D+L+ R+P +R Sbjct: 156 RLRAQLRAEGLFRPERKKRLPFLPHTIGLVTGKDSDAEKDVLRNAQLRWPQVRFRTVYAA 215 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD E+ A L+E P ++II+ARGGG ++L F+DE ++RA A S Sbjct: 216 VQGDRTVPEVTAA------LRELDADPEVEVIIVARGGGDFQNLLGFSDESLLRAAAGLS 269 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D ADLRA TPT AA+ VP + AR+ + +I Sbjct: 270 TPLVSAIGHEADRPLLDEVADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHII 329 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 +++I+ + L L + + L R +E + R+ + +++ Sbjct: 330 RHEIDRIGHLRTRPALASGSWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLR 389 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQI 383 + +++ + + Sbjct: 390 ALSPQATLERGYAIVQNAAGRVVAA 414 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 5/169 (2%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK---- 410 +++ ++ + E+ + Q + + + +I + LR + Sbjct: 289 ADLRASTPTDAAKRVVPDVAEELVRVHQARARIGTRLTHIIRHEIDRIGHLRTRPALASG 348 Query: 411 -NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + + + + R ++ + V+ L++ + + TL+RGY +Q+ Sbjct: 349 SWIVDSRAQDLTRFVARGAELVERCVDREAARVAELRGQLRALSPQATLERGYAIVQNAA 408 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518 + T + I G A P Q L + Sbjct: 409 GRVVAAPGEAPAGTELRITVSGGSLAATAGKALPSPAQGATNGSLAAPR 457 >gi|295838738|ref|ZP_06825671.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB74] gi|295827164|gb|EFG65282.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB74] Length = 413 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 12/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDA 66 + V E+S + V + L V V G+++ + + + +D+ I Sbjct: 5 TTPEAALPVREVSRLIGDWV-ARLGEVWVEGQLTQISRRPGARVVFLTFRDSSHDVSISL 63 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ + + + EG +V K + G + + P G G LL LE+ K++ Sbjct: 64 TCFRPVFDAVADVVTEGSRIVVRAKPEWYHGRGSLSLRAAEIRPVGIGELLVKLERLKRE 123 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K P+PF+P+ I ++T A RD+++ R+P +R V VQG Sbjct: 124 LTAEGLFAADRKRPLPFLPRRIGLVTGRASAAERDVIKNAEARWPAVRFETREVAVQGVH 183 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 ++ A+ E P D+I++ARGGGS+EDL F+D ++R +A P++S Sbjct: 184 AVAQVVGAVR------ELDAHPDVDVIVVARGGGSVEDLLPFSDAELIRTVAACRTPVVS 237 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHE D L D ADLRA TPT AA+ VP + R + L+ + Sbjct: 238 AIGHEPDTPLLDLVADLRASTPTDAAKRVVPDVGEELERVRQARDRARQAVRALVVRESQ 297 Query: 306 --TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 AL + + ++ + + ++ R H + R+ + Sbjct: 298 GLEQALAHSALRDPYRLVAGRDEEIGAEIGRARRTVGHLLDRADSDLAHTLARVVALSPA 357 Query: 364 HNIQK 368 + + Sbjct: 358 ATLGR 362 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 42/126 (33%), Gaps = 2/126 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + Q V+ + ++ A+ H + I I R Sbjct: 275 ERVRQARDRARQAVRALVVRESQGLEQ--ALAHSALRDPYRLVAGRDEEIGAEIGRARRT 332 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + H + + ++ T + + + TL RGY +Q + + +A + Sbjct: 333 VGHLLDRADSDLAHTLARVVALSPAATLGRGYAVLQRADGAAVRAPEEVAAGEELRARVA 392 Query: 491 DGQANA 496 +G+ Sbjct: 393 EGEFTV 398 >gi|302519266|ref|ZP_07271608.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB78] gi|318061126|ref|ZP_07979847.1| exodeoxyribonuclease VII large subunit [Streptomyces sp. SA3_actG] gi|318077027|ref|ZP_07984359.1| exodeoxyribonuclease VII large subunit [Streptomyces sp. SA3_actF] gi|333026905|ref|ZP_08454969.1| putative exodeoxyribonuclease VII large subunit [Streptomyces sp. Tu6071] gi|302428161|gb|EFK99976.1| exodeoxyribonuclease VII, large subunit [Streptomyces sp. SPB78] gi|332746757|gb|EGJ77198.1| putative exodeoxyribonuclease VII large subunit [Streptomyces sp. Tu6071] Length = 409 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 94/409 (22%), Positives = 171/409 (41%), Gaps = 12/409 (2%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN--HSRIDA 66 + V E+S + V + L V V G+++ + + + +D+ I Sbjct: 5 TTPEAALPVREVSRLIGDWV-ARLGEVWVEGQLTQISRRPGARVVFLTFRDSSHDVSISL 63 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++ + + + EG +V K + G + + P G G LL LE+ K++ Sbjct: 64 TCFRPVFDAVADVVTEGSRIVVRAKPEWYQGRGSLSLRASEIRPVGIGELLVKLERLKRE 123 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+ K P+PF+P+ I ++T A RD+++ R+P +R V VQG Sbjct: 124 LTAEGLFAADRKRPLPFLPRRIGLVTGRASAAERDVIKNAEARWPAVRFETREVAVQGVH 183 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 ++ A+ E P D+I++ARGGGS+EDL F+D ++R +A P++S Sbjct: 184 AVSQVVGAVK------ELDAHPDVDVIVVARGGGSVEDLLPFSDAELIRTVAACRTPVVS 237 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHE D L D ADLRA TPT AA+ VP + R + I L+ + + Sbjct: 238 AIGHEPDTPLLDLVADLRASTPTDAAKRVVPDVGEELERVRQTRDRARHAIRALVDREAH 297 Query: 306 --TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L + + ++ + + ++ R H + R+ + Sbjct: 298 GLEQALAHSVLRDPYRLVAGRDEEIGAEIDRARRTVGHLLDRADSDLAHTLARVVALSPA 357 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 +++ + + + ++ L + + R + + Sbjct: 358 ATLRRGYAVLQRADGAVVRAPEEIAADEELRARVAEGEFTVRRTERRKD 406 Score = 82.1 bits (201), Expect = 2e-13, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 52/159 (32%), Gaps = 5/159 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI-----AILHMLRE 407 ++ +++ ++ + E+ + + Q + I + A+ H + Sbjct: 250 LVADLRASTPTDAAKRVVPDVGEELERVRQTRDRARHAIRALVDREAHGLEQALAHSVLR 309 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I I R + H + + ++ T + + + TL+RGY +Q Sbjct: 310 DPYRLVAGRDEEIGAEIDRARRTVGHLLDRADSDLAHTLARVVALSPAATLRRGYAVLQR 369 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 + + +A + +G+ + E Sbjct: 370 ADGAVVRAPEEIAADEELRARVAEGEFTVRRTERRKDDE 408 >gi|269219217|ref|ZP_06163071.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269211364|gb|EEZ77704.1| exodeoxyribonuclease VII, large subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 447 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 93/432 (21%), Positives = 177/432 (40%), Gaps = 11/432 (2%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + LS ++ V + +S + V GE+ + + +F+L+D + Sbjct: 12 PQLAAQTTPDRPWPLRVLSMKIREYV-AAMSRLWVEGEVITLQRRPGAKVQFFTLRDLEA 70 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + + K + E G +V K + + + + + P G G +L +E+ Sbjct: 71 NVSITV-KIMAYLLPATIEPGSRAVVCAKPDFYEVNGSLSLWADEVRPVGLGDILARIEQ 129 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K +L EGLFS + K +PF+P I +I D+L + R+P R + V+V Sbjct: 130 LKSRLAAEGLFSAERKTKVPFLPGKIGLICGRNTKAREDVLVNVLGRWPAARFDVREVRV 189 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG+ + + A+ L P D+++ ARGGGS+EDL F+DE +VRA+A + Sbjct: 190 QGEGAVEAMIEALESL------EEAPGVDVVVFARGGGSVEDLLPFSDERLVRAVAKAKK 243 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHE D + D ADLRA TPT AA+ VP +++ R + + + Sbjct: 244 PVVSAIGHEGDSPILDLVADLRASTPTDAAKRIVPDVAEELATIAEAARRGRSAVQAGLD 303 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+S+ L + + L L R + +++ I + +++ Sbjct: 304 RAQSELDSIRARPALAFPETIVDMREEDLLSLTRWMRTHVDRAIADAAGELAAAVANLRA 363 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + +L + + + ++ + + Sbjct: 364 LSPRATLDRGYSILLSEGSVVSNAAAARKGQEVEAILARGRLVLAVAAVAEQDGAVAEEG 423 Query: 420 IKKLITRIEFIL 431 + + Sbjct: 424 LAVNQDNLTAAA 435 Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 15/165 (9%), Positives = 51/165 (30%), Gaps = 6/165 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ ++ + E+ I + ++ + + L +R + Sbjct: 260 LVADLRASTPTDAAKRIVPDVAEELATIAEAARRGRSAVQAGLDRAQSELDSIRARPALA 319 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + + L + + I ++ L++ + + TL RGY+ + Sbjct: 320 FPETIVDMREEDLLSLTRWMRTHVDRAIADAAGELAAAVANLRALSPRATLDRGYSILLS 379 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512 + ++ + G+ V A ++ Sbjct: 380 E-GSVVSNAAAARKGQEVEAILARGRLVLAVAAVAEQDGAVAEEG 423 >gi|157364866|ref|YP_001471633.1| exodeoxyribonuclease VII, large subunit [Thermotoga lettingae TMO] gi|254783716|sp|A8F8T5|EX7L_THELT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|157315470|gb|ABV34569.1| exodeoxyribonuclease VII, large subunit [Thermotoga lettingae TMO] Length = 389 Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats. Identities = 100/361 (27%), Positives = 180/361 (49%), Gaps = 17/361 (4%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 Y+VSE++Y+++ +++ + LS + V GEI+ + +GH +F LKD + I + + Sbjct: 3 KIYTVSEVTYYIEALIDQDQYLSDIQVVGEIADLKER--NGHLFFYLKDEFTTIGCVFFG 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-GTLLTALEKRKKKLLE 129 G F +G V G+I + +Y++I GTL +++ ++L+ Sbjct: 61 GAYRS--FGLSDGRIAQVAGQIKVYAPRGQYRLICRQAKILPERGTLFLRMKESYERLVA 118 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EG+F + P+P P I +ITS A +D+L+ IS R+P + + ++ VQG++ Sbjct: 119 EGIFDKPKR-PLPEYPSKIGLITSRNSAAYQDVLRTISDRYPLVEIFLYHTGVQGEDAKG 177 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 + A+ +N D++I+ RGGGS +DLW FNDE IVRA+ P+I+ +G Sbjct: 178 SLLRALKDVNES-------DVDVVIITRGGGSRDDLWLFNDEDIVRAVYKLRHPVITGVG 230 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 H+ D D AD A TPT AA+ AVP ++ + L R+N I + I+ + Sbjct: 231 HQIDTVFIDLVADYSAHTPTAAAQAAVPNLSEIRMHFLELMQRMNLSIRKKIESFSQQIE 290 Query: 309 SLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 S K+L S + + +D + + ++ +F + + ++ S + ++ Sbjct: 291 SSNKSLFQSMMSQILRTHSSIDSMKEKAFALMQRQMFSYEKKLSSAGTKLFSLNPVELLK 350 Query: 368 K 368 K Sbjct: 351 K 351 Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 60/160 (37%), Gaps = 5/160 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL----RYIFLEKKEKI 399 + F ++ + Q ++ E + H +++++ + I ++ Sbjct: 231 HQIDTVFIDLVADYSAHTPTAAAQAAVPNLSEIRMHFLELMQRMNLSIRKKIESFSQQIE 290 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 + L + ++I H+ I + + ++ ++ S +S L S LK Sbjct: 291 SSNKSLFQSMMSQILRTHSSIDSMKEKAFALMQRQMFSYEKKLSSAGTKLFSLNPVELLK 350 Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 +GY ++ + ++ L K I + FFDG +V Sbjct: 351 KGYVIVE-KDGKWVKSSSILREKDEISMRFFDGVVKVVVK 389 >gi|126661407|ref|ZP_01732468.1| Exonuclease VII, large subunit [Cyanothece sp. CCY0110] gi|126617314|gb|EAZ88122.1| Exonuclease VII, large subunit [Cyanothece sp. CCY0110] Length = 395 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 118/307 (38%), Positives = 174/307 (56%), Gaps = 13/307 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70 SV+ L+ ++K ++E + L V V GE+S H G +F+L DN + I ++W Sbjct: 21 LSVTGLTEYIKLLLEEDPQLIQVWVTGEVSSL-HEHRVG-LFFTLSDNQGQATIKCVVWN 78 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ LP+ G E LV+G + + +YQ+ + ++ +G G ++ K +L E Sbjct: 79 SQKERLLELPKLGSEILVMGNVRLYAKKGEYQLTVFQVLATGEGLQALRYQQLKNRLASE 138 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF K +P PKIIAV+T+ T A DI + +S R P ++V+ P VQG E P Sbjct: 139 GLFEKHLKRSLPSFPKIIAVVTATTAAAWGDIQKTLSHRNPGVKVLFSPATVQGKEAPSS 198 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++N R ++IILARGGG++EDL+ FNDE +VRAIA SSIP+I+ IGH Sbjct: 199 IVKAIERVN------IDGRAELIILARGGGAVEDLFCFNDERVVRAIALSSIPVITGIGH 252 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D TLAD AD+ A TPT AAEMAVP E + + RL + + ++ + + L S Sbjct: 253 QRDETLADLVADVNAHTPTAAAEMAVPSYEVMLIEHQQRKERLVASLKQRLREESDQLAS 312 Query: 310 LLKALPN 316 L L N Sbjct: 313 LKNRLKN 319 Score = 87.1 bits (214), Expect = 6e-15, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 41/124 (33%), Gaps = 2/124 (1%) Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCH 439 + + + E L K R+ + L R++ + + ++ Sbjct: 272 AAAEMAVPSYEVMLIEHQQRKERLVASLKQRLREESDQLASLKNRLKNLPVSATSLREAK 331 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + + LQ+ LKRG++ ++ T+ I Q + L + I G V Sbjct: 332 MKTVMLKQKLQALDPHAVLKRGFSVVRQTDGEIILQGKQLIEGQELTIQLPQGIIKVKVT 391 Query: 500 NKAP 503 P Sbjct: 392 EIWP 395 >gi|227487858|ref|ZP_03918174.1| exodeoxyribonuclease VII large subunit [Corynebacterium glucuronolyticum ATCC 51867] gi|227542499|ref|ZP_03972548.1| exodeoxyribonuclease VII large subunit [Corynebacterium glucuronolyticum ATCC 51866] gi|227092185|gb|EEI27497.1| exodeoxyribonuclease VII large subunit [Corynebacterium glucuronolyticum ATCC 51867] gi|227181697|gb|EEI62669.1| exodeoxyribonuclease VII large subunit [Corynebacterium glucuronolyticum ATCC 51866] Length = 411 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 14/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 +++ + +SVS ++ + + V L V GE+ + +Y SLKD + Sbjct: 1 MAKQTTSPDHPFSVSTINTLVGNWV-GRLGDAWVEGELIQVNIKPTWSFSYLSLKDLNDD 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + G +V GK + + +Y +++ + G G L +E Sbjct: 60 ISMQLTCPTNIATAANIT--SGDRVIVHGKPRVYQRNGQYSLMVSEIRHVGIGEELARIE 117 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + ++ L EGLF + K P+P +P+ + +IT A RD+L+ R+P ++ I Sbjct: 118 QLRRDLAAEGLFRPELKKPLPVLPRCVGLITGQGSAAERDVLKVTHDRWPAVQFKIINTA 177 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG EI A+ QL T P D+II+ARGGGS+EDL+ F+ E +VRA+A + Sbjct: 178 VQGQRAEPEIIAALAQL------DTDPDVDVIIIARGGGSVEDLFPFSREGLVRAVAAAQ 231 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P+ISAIGHE D + D AD A TPT A + VP + + +R N + + Sbjct: 232 TPVISAIGHEPDQPILDNVADFAAKTPTDAGKNVVPDAMQEALMIQEMRSRAANALRSWV 291 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L ++ L N + + + + + ++ R + R+ Sbjct: 292 VREEEGLANIRSRPVLKNPYTIVEEQEAIISDCTQRARRCVAAVFAQEDRDIVSLRARVT 351 Query: 359 SDFLIHNIQK 368 + +Q+ Sbjct: 352 ALGPAATLQR 361 Score = 75.6 bits (184), Expect = 2e-11, Method: Composition-based stats. Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 5/110 (4%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + + I R ++ + + + TL+R Sbjct: 302 RSRPVLKNPYTIVEEQEAIISDCTQRARRCVAAVFAQEDRDIVSLRARVTALGPAATLQR 361 Query: 461 GYTSIQ-----DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 GY+ +Q ++ + +T +++ I DG A ++ P Sbjct: 362 GYSVVQVVPRDGSDTHVVTTIAETPPGSQLRIRVTDGSITAATMSTTPAD 411 >gi|158564341|sp|Q3AH76|EX7L_SYNSC RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit Length = 387 Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats. Identities = 94/325 (28%), Positives = 159/325 (48%), Gaps = 9/325 (2%) Query: 13 PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 P YSV+EL+ + ++E + +S R GH + +L D + I ++W Sbjct: 7 PSYSVAELNTAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLTDGSASISGVVWAS 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L ++ + P++G V+GK+ + + + + PS T+L E+ ++ L +EG Sbjct: 65 KLAQLSYQPKDGDGVTVVGKLNFWAARASLTVQALDIRPS-LSTVLRDFERVRQVLEQEG 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 + P+P P IAV+TS + + D+L+ + R+PL ++I+ P+ VQG P I Sbjct: 124 VIDPSRLRPLPSQPASIAVLTSVPSSALADMLRTAAERWPLTQLIVVPIPVQGSVAPTII 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 L + E ++LARGGGS EDL F++E + R +AN IP+++ +GHE Sbjct: 184 ----NTLEAIAERTAELGLQALVLARGGGSREDLAVFDNEALCRLLANYPIPVVTGLGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T+AD AD RA TPT A +P +E + L ++RL + ++ I + L Sbjct: 240 DDLTVADLVADHRAATPTAAIVALLPDREAERQGLTQRQSRLKDTLLGRILRERQRLQDR 299 Query: 311 LKALPNSDQTLSCSRYRLDRLPREL 335 AL R R + + + Sbjct: 300 AVALQQQSPREKIMRKRQELIQKHQ 324 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 1/120 (0%) Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRIL 449 E++ L++ RI ++ ++ KI + ++L Sbjct: 267 REAERQGLTQRQSRLKDTLLGRILRERQRLQDRAVALQQQSPREKIMRKRQELIQKHQLL 326 Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509 ++ + + LKRG I + + I ++ ++ I DG A V P T Sbjct: 327 KALSPERWLKRGLALISNKAGDPIPGLESVKIGDQLNIRMSDGSLEARVDQIQPSAPNTT 386 >gi|257069425|ref|YP_003155680.1| Exodeoxyribonuclease VII large subunit [Brachybacterium faecium DSM 4810] gi|256560243|gb|ACU86090.1| Exodeoxyribonuclease VII large subunit [Brachybacterium faecium DSM 4810] Length = 479 Score = 208 bits (528), Expect = 3e-51, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 179/374 (47%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + ++P + + +LS + V + +S + V GEI +G ++ +L+D Sbjct: 22 PTAAQTTAENP-WPLRQLSVKVGEYV-ARMSPLWVEGEIVQLNRRPGAGLSFMTLRDVDV 79 Query: 63 RIDAIIWK-----GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 + + L + P G +V K T + Q+ + + P G G LL Sbjct: 80 DMS---FSVPVREHVLRALPVEPVAGARVVVHAKPTFWTKRGSLQLEADDIRPVGLGELL 136 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 LE+ K+ L EGLF+ K +PF+P+++ +I A RD++ R+P ++ I Sbjct: 137 ARLEQLKRVLAAEGLFASSRKQALPFLPRVVGLICGRESAAERDVVVNARRRWPAVQFEI 196 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG +E++ A+ +L+ L + D+II++RGGGS+EDL F+DE + R + Sbjct: 197 REVAVQGARAVREVSAALRELDELAQ------VDVIIISRGGGSLEDLLPFSDEQLTRLV 250 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A + PI+SAIGHE D L D AAD+RA TPT AA+ VP L RL I Sbjct: 251 AGARTPIVSAIGHEVDTPLIDLAADVRASTPTDAAKRVVPDIVAEVEQLDLGRTRLRAAI 310 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 I+ + + L+++ L N L+ + + + R +H+ Sbjct: 311 RARIEREQSALDAMRSRPVLENPSTILAGRADEIRSRISLARTLIGSRLDRAADEVDHLG 370 Query: 355 NRIKSDFLIHNIQK 368 +++S + +++ Sbjct: 371 RQVRSLSPLATLER 384 Score = 86.0 bits (211), Expect = 1e-14, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 40/133 (30%), Gaps = 2/133 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + R + + E + I+ I+ + Sbjct: 297 EQLDLGRTRLRAAI--RARIEREQSALDAMRSRPVLENPSTILAGRADEIRSRISLARTL 354 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + ++ V R ++S + TL+RGY +QD + + + + Sbjct: 355 IGSRLDRAADEVDHLGRQVRSLSPLATLERGYAVVQDAEGTIVREPEQSTVGQPLSVRVA 414 Query: 491 DGQANAIVINKAP 503 G+ P Sbjct: 415 GGRFGVERTTADP 427 >gi|33863908|ref|NP_895468.1| exonuclease VII, large subunit [Prochlorococcus marinus str. MIT 9313] gi|33635491|emb|CAE21816.1| Exonuclease VII, large subunit [Prochlorococcus marinus str. MIT 9313] Length = 385 Score = 208 bits (528), Expect = 3e-51, Method: Composition-based stats. Identities = 98/330 (29%), Positives = 162/330 (49%), Gaps = 9/330 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + P YSV +L+ + ++E V +S + GH + +L D ++ I A Sbjct: 2 TAESLPNYSVRDLNAAIGTLLERGFAPRFLVEASVS--KPQIKKGHLWLTLTDGNASITA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + W L ++ + P EG V+GK+ + + + + L PS T+L E K Sbjct: 60 VAWASKLQQLTYRPAEGDGVTVVGKLNFWATRASLAVQVIDLRPS-LSTVLRQFEIVKAL 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 LL+EGL + + +P P+++A++TS + + D+L+ R+PL +++I P+ VQG Sbjct: 119 LLKEGLIDESKQKALPKYPEVVAILTSVPSSALADMLRTAKERWPLTQLLIIPIPVQG-G 177 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K+I + + +L I+LARGGGS EDL F+DE + R +A+ IP+++ Sbjct: 178 VAKQIQSVLR---SLANQHDELGIAAIVLARGGGSREDLMVFDDEDLCRDLASFPIPVVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+AD AD RA TPT A +P +E Q+ L+ RL + LI+ + Sbjct: 235 GLGHEDDQTVADLVADHRAATPTAAMVALLPSRESAQNVLMQRRHRLKDHCNWLIRKERE 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 L KAL R+ + Sbjct: 295 RLVMRGKALECQQPLKQIELQRIHLSQKHQ 324 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 44/126 (34%), Gaps = 5/126 (3%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR----IFYLHTHIKKLITRIE-FIL 431 H + + ++ +L R + K+ I + +E Sbjct: 249 ADHRAATPTAAMVALLPSRESAQNVLMQRRHRLKDHCNWLIRKERERLVMRGKALECQQP 308 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 +I+ +S ++LQ+ + + L RG+ +++ + N++ + I D Sbjct: 309 LKQIELQRIHLSQKHQLLQALSPELWLMRGFAIVKNKQGKTLRSVGNVSVLDNLTIQLSD 368 Query: 492 GQANAI 497 GQ N Sbjct: 369 GQINTT 374 >gi|67920662|ref|ZP_00514182.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501] gi|67858146|gb|EAM53385.1| Exonuclease VII, large subunit [Crocosphaera watsonii WH 8501] Length = 406 Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats. Identities = 117/307 (38%), Positives = 174/307 (56%), Gaps = 13/307 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR--IDAIIWK 70 SV L+ +++ ++E + L V V GE+S + H+ G +F+L D+ + + +IW Sbjct: 31 LSVRGLTEYIQLLLEDDPQLIRVWVSGEVSSLKV-HTVG-LFFTLSDSGGQTTLKCVIWN 88 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 +++ LP+ G E LV G I +P +YQ+ I ++ +G G ++ K +L +E Sbjct: 89 SQKTRLQELPKLGTEILVKGNIRLYPKKGEYQLTIFEVLATGDGLQALRYQQLKTRLAKE 148 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF K +P P+IIAVIT+ T A DI + R P ++V+ P VQG E P Sbjct: 149 GLFDQSIKRSLPLFPQIIAVITATTAAAWGDIQKTSYQRNPGVKVLFSPATVQGKEAPSS 208 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++N R ++IILARGGG++EDL+ FNDE +VRAIA S IP+I+ IGH Sbjct: 209 IVKAIERVN------NDGRAELIILARGGGAVEDLFCFNDERVVRAIAQSPIPVITGIGH 262 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D TLAD AD+ A TPT AAE+AVP E L+ + RL I + +K + L+ Sbjct: 263 QRDETLADLVADVNAHTPTAAAEIAVPSYEVLKIEHQQRKQRLIASIQQRLKQDLEQLDG 322 Query: 310 LLKALPN 316 L L + Sbjct: 323 LKNRLKS 329 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 14/107 (13%), Positives = 35/107 (32%), Gaps = 2/107 (1%) Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--RILQSFAY 454 E L + R+ + L R++ I + + + + L++ Sbjct: 297 EHQQRKQRLIASIQQRLKQDLEQLDGLKNRLKSIPLNAVSIREAKIKTLMLRQKLKALDP 356 Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 L+RG++ ++ + + L + ++I G V Sbjct: 357 HAVLERGFSVVRQIDEEIVRDVEQLNEEQELIIQLAQGSIKVKVTEI 403 >gi|256825840|ref|YP_003149800.1| Exodeoxyribonuclease VII large subunit [Kytococcus sedentarius DSM 20547] gi|256689233|gb|ACV07035.1| Exodeoxyribonuclease VII large subunit [Kytococcus sedentarius DSM 20547] Length = 413 Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats. Identities = 81/371 (21%), Positives = 166/371 (44%), Gaps = 12/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + L+ + V+ +S + V G++ + + +L+D + Sbjct: 9 PQKAAQTTAEAPWPLRTLARKIDEYVDR-MSALWVEGQLVEISRREGARWVWMTLRDTDA 67 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + G ++ ++ ++G ++ K + + + ++ G G LL + Sbjct: 68 DFSMRVMAPLGVVDGVQPPLQQGARVVMQAKPRFYTKNGSLSLSCRAIRHVGVGELLARV 127 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ KK+L EG+F K +PF+P+ + ++ A +D+++ R+P +I V Sbjct: 128 EQLKKQLAAEGVFDAGRKRALPFLPRRVGLVCGRNSAAEKDVVENARRRWPATEFVIQNV 187 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + A+ E + P+ D+II++RGGGS EDL F++E ++RA+A Sbjct: 188 VVQGPGAVTAVIAAVE------ELQRTPQVDVIIISRGGGSFEDLLPFSNEAMIRAVAAC 241 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 +P +SAIGH+ D L D AD+RA TPT AA++ VP + + RL + Sbjct: 242 PVPTVSAIGHDVDTPLLDLVADVRASTPTDAAKLVVPDAAAEERGITQGRERLRRALTGR 301 Query: 300 IKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + T + + ++ R L+R + E + + + + Sbjct: 302 LAAERQGLTAVRQRPVMADPTVMVTRPRAELERARQAGERAQARRLTGEQQRVTATRGHL 361 Query: 358 KSDFLIHNIQK 368 ++ + +++ Sbjct: 362 RALSPLGTLER 372 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 44/125 (35%), Gaps = 2/125 (1%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 ++ + + + R + + + +++ E + ++ Sbjct: 291 RERLRRALTG--RLAAERQGLTAVRQRPVMADPTVMVTRPRAELERARQAGERAQARRLT 348 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 V+ T L++ + TL+RGY+ ++ + + +T + + + + DG Sbjct: 349 GEQQRVTATRGHLRALSPLGTLERGYSVLRTPDGHVVTSRDEVEADQLLRVTVADGDFAT 408 Query: 497 IVINK 501 V+ Sbjct: 409 RVLGG 413 >gi|15644513|ref|NP_229565.1| exodeoxyribonuclease VII, large subunit [Thermotoga maritima MSB8] gi|14194739|sp|Q9X289|EX7L_THEMA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|4982347|gb|AAD36832.1|AE001815_6 exodeoxyribonuclease VII, large subunit [Thermotoga maritima MSB8] Length = 394 Score = 206 bits (524), Expect = 7e-51, Method: Composition-based stats. Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 18/361 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSV+E++ ++K ++E + L++V V GEISG GH +FSL + ++R++ +I+ G Sbjct: 6 YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + +EG LV G ++ + Y+ I ++ + + K L E Sbjct: 64 N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDQAGMYQIKFETTLKKLLEEG 121 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191 + K +P P+ I +ITS A ++D+++ R P+ + +F VQGD +E+ Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ + N D++++ RGGGS EDLW FN+E ++R I P+++ IGHE Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWVFNEEDVIREILRLRHPVVTGIGHEI 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +AD+ AD+ TPTGAAE +P + L + +L + + L +L Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFFEKLITSLSNRFDMEERRLETLY 294 Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + R+ L +L L + + + ++S + ++ Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDYFEHNQKKLDSLGRMLESLNPLRPLE 354 Query: 368 K 368 + Sbjct: 355 R 355 Score = 87.5 bits (215), Expect = 5e-15, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 1/130 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + L M+ + + +K+L ++ Sbjct: 266 EDLDSFFEKLITSLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L + + R+L+S L+RG+ ++ + + + +L + + F Sbjct: 326 LMDYFEHNQKKLDSLGRMLESLNPLRPLERGFVLVK-KDEKIVKESTDLKRGDVVSLVFK 384 Query: 491 DGQANAIVIN 500 DG A VI Sbjct: 385 DGTKKAQVIG 394 >gi|320094362|ref|ZP_08026149.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon 178 str. F0338] gi|319978695|gb|EFW10251.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon 178 str. F0338] Length = 435 Score = 206 bits (523), Expect = 9e-51, Method: Composition-based stats. Identities = 95/370 (25%), Positives = 175/370 (47%), Gaps = 12/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 ++ + + L+ ++K V+ +S + V G++ ++ + + +L+D Sbjct: 10 AKAADTTRDNPWPLRRLTENIKKYVDR-MSPLWVEGQVVEFKRRPGAKMHFLTLRDLQTD 68 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + W G +++ +EG + K + + + + + G G+LL +E Sbjct: 69 TSMTVTAWAGVMDQAGDGLQEGARVVTRVKPVFWERTGRLNLQAAEIHLQGVGSLLAQIE 128 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +++L EGLF++ K P+PF+P++I ++ D++ S R+P R I V Sbjct: 129 ALRQRLAAEGLFNESRKKPLPFLPRVIGLVCGRAAKAEDDVVVNASDRWPGARFEIREVA 188 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD C E+ A L E P D+I++ARGGG++EDL F+DE +VRA+A + Sbjct: 189 VQGDRCVAEVGAA------LAELDAAPGVDVIVIARGGGAVEDLLPFSDEALVRAVAAAR 242 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D AD RA TPT AA VP + H + + AR+ + I Sbjct: 243 TPVVSAIGHEGDCPLLDLVADYRASTPTDAARRIVPDRAHEREGVAQAVARMRGAVANRI 302 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + ++L + L + R L+RL + +E + + + + ++ Sbjct: 303 AAERSSLALVASRPVLTGPGAIVDGYRAALERLTSSMNQAVERRVNTEEQQLTRMRATLR 362 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 363 ALSPQATLDR 372 Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 48/156 (30%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + Q R + + + +++L + Sbjct: 279 DRAHEREGVAQAVARMRGAVANRIAAERSSLALVASRPVLTGPGAIVDGYRAALERLTSS 338 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ + ++ L++ + + TL RGY ++ + IT ++ I Sbjct: 339 MNQAVERRVNTEEQQLTRMRATLRALSPQATLDRGYALLKTPSGALITSSSDVKKGDLIE 398 Query: 487 INFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQ 522 G+ A V+ PP +P ++ Sbjct: 399 GILASGRMVAQVVGATPPAPRPGSAPPGGSDPAGAP 434 >gi|152965090|ref|YP_001360874.1| exodeoxyribonuclease VII, large subunit [Kineococcus radiotolerans SRS30216] gi|151359607|gb|ABS02610.1| exodeoxyribonuclease VII, large subunit [Kineococcus radiotolerans SRS30216] Length = 427 Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats. Identities = 91/377 (24%), Positives = 170/377 (45%), Gaps = 16/377 (4%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN 60 + P + + + V L+ + + + + V G++ + + +L+D Sbjct: 13 LRPTTAGGTTAENPWPVRLLAAKMDAYI-AKMPWTWVEGQVVQVNDRPGASVVFVTLRDA 71 Query: 61 HS--RIDAIIWKGTLNKIEFLPEEGI----EFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 + + I + L ++ +G+ +V + F + + + P G G Sbjct: 72 DTDMSLPVTITRRVLGRLRETLPDGLAHGTRVVVHARPEFFAKRGTLSLAADDVRPVGVG 131 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LR 173 LL LE K+ L EGLF K +PF+P+ + ++ A RD+++ R+P +R Sbjct: 132 ELLARLEHLKRVLRGEGLFDASRKRALPFLPRTVGLVCGRASAAERDVVENARLRWPSVR 191 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 + V VQG E+ A+ +L+ L P D++++ARGGG++EDL F++E ++ Sbjct: 192 FEVREVAVQGPNAVTEVVAALAELDAL------PEVDVVVIARGGGAVEDLLPFSNETLL 245 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 RA+A + P++SAIGHE D L D AD+RA TPT AA VP + L L R++ Sbjct: 246 RAVAAARTPVVSAIGHEVDSPLLDLVADVRASTPTDAARRVVPDAAEELARLEALRRRVH 305 Query: 294 NIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 + ++ + +TL +L L + +D L L+ + R + Sbjct: 306 QAVDTRVEREEHTLAALRSRPVLAAPHVLVDRRAQEVDDLRARARRGLDHRLERARVDVD 365 Query: 352 HIINRIKSDFLIHNIQK 368 H+ +++ + + Sbjct: 366 HLRTSVRALSPRSTLLR 382 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 58/156 (37%), Gaps = 5/156 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--- 409 ++ +++ ++ E+ +E + ++ + + + + L LR + Sbjct: 270 LVADVRASTPTDAARRVVPDAAEELARLEALRRRVHQAVDTRVEREEHTLAALRSRPVLA 329 Query: 410 --KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + + L R L H+++ V +++ + ++TL RGY +Q Sbjct: 330 APHVLVDRRAQEVDDLRARARRGLDHRLERARVDVDHLRTSVRALSPRSTLLRGYAVVQR 389 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + TR+ + DG+ A+ P Sbjct: 390 PDGGLVRTPADAPAGTRLRVRLPDGEVAAVAAPTGP 425 >gi|170288848|ref|YP_001739086.1| exodeoxyribonuclease VII, large subunit [Thermotoga sp. RQ2] gi|226697619|sp|B1LAQ5|EX7L_THESQ RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|170176351|gb|ACB09403.1| exodeoxyribonuclease VII, large subunit [Thermotoga sp. RQ2] Length = 394 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 94/361 (26%), Positives = 169/361 (46%), Gaps = 18/361 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSV+E++ ++K ++E + L++V V GEISG GH +FSL + ++R++ +I+ G Sbjct: 6 YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + +EG LV G ++ + Y+ I ++ + + K L E Sbjct: 64 N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDQAGMYQIKFETTLKKLLEEG 121 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191 + K +P P+ I +ITS A ++D+++ R P+ + +F VQGD +E+ Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ + N D++++ RGGGS EDLW FN+E ++R I P+++ IGHE Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWGFNEEDVIREILKLRHPVVTGIGHEI 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +AD+ AD+ TPTGAAE +P + L + +L + + L +L Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFLEKLIASLSNRFDMEERRLETLY 294 Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + R+ L +L L + + ++S + ++ Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDCFEQDQEKLESLGRMLESLNPLRPLE 354 Query: 368 K 368 + Sbjct: 355 R 355 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 1/130 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + L M+ + + +K+L ++ Sbjct: 266 EDLDSFLEKLIASLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L + + R+L+S L+RG+ ++ + + +L + + F Sbjct: 326 LMDCFEQDQEKLESLGRMLESLNPLRPLERGFVLVK-KEGEIVKESSDLKRGDVVSLVFK 384 Query: 491 DGQANAIVIN 500 DG A VI Sbjct: 385 DGTKKAQVIG 394 >gi|222099932|ref|YP_002534500.1| Exodeoxyribonuclease 7 large subunit [Thermotoga neapolitana DSM 4359] gi|221572322|gb|ACM23134.1| Exodeoxyribonuclease 7 large subunit [Thermotoga neapolitana DSM 4359] Length = 393 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 101/362 (27%), Positives = 172/362 (47%), Gaps = 18/362 (4%) Query: 14 EYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 Y+V+E+S ++K ++E + L +V V GEI+ GH +FSL D ++++D +++ G Sbjct: 5 VYTVTEISEYIKKLLEEDPYLVNVSVYGEITNV--RPRKGHIFFSLVDENAKLDCVLFGG 62 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + +EG LV G I+ + Y+ + ++ + K L E Sbjct: 63 DN--MGIRLQEGKMALVDGSISVYTPHGTYRFVCSNIRYLDHIGTYQMKFETTLKKLLEE 120 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190 + K P+P P+ I VITS + A D+++ R P+ + +F VQGD KE+ Sbjct: 121 GLLYRPKRPLPRFPRRIGVITSRSSAAFHDVIRTAKERKSPVEIYLFHTSVQGDSAKKEL 180 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 A+ + N D++++ RGGGS EDLW FN+E +VR I P+++ IGHE Sbjct: 181 IEALRKANE-------YDLDLVLIVRGGGSREDLWVFNEEEVVREILKMKHPVVTGIGHE 233 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D +AD+ AD+ TPTGAAE +P + L NL R+ + ++ I + LN L Sbjct: 234 IDRVIADFVADVSMHTPTGAAEYVLPDLRDVHEELKNLYERMKDAVLEKITREEERLNRL 293 Query: 311 LKAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + + R+ + +L + + RK H+ ++S + Sbjct: 294 FHYIKAAAKRKYEINKLTAIRVKEMAGKLRSLVLNSVRRKQERVEHLFRVLESLKPTRFL 353 Query: 367 QK 368 K Sbjct: 354 DK 355 Score = 75.2 bits (183), Expect = 3e-11, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 55/152 (36%), Gaps = 8/152 (5%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + + ++ + ++ + + + L+ L K Sbjct: 243 ADVSMHTPTGAAEYVLPDLRDVHEELKNLYERMKDAVLEKITREEERLNRLFHYIKAAAK 302 Query: 415 YLHT-------HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + +K++ ++ ++ + ++ V R+L+S L +G+ ++ Sbjct: 303 RKYEINKLTAIRVKEMAGKLRSLVLNSVRRKQERVEHLFRVLESLKPTRFLDKGFVLVK- 361 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + + +L + + + F DG+ A VI Sbjct: 362 KEGKIVKEAASLNSGDIVFLIFRDGEKKARVI 393 >gi|72160872|ref|YP_288529.1| exodeoxyribonuclease VII large subunit [Thermobifida fusca YX] gi|123760890|sp|Q47SR1|EX7L_THEFY RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|71914604|gb|AAZ54506.1| Exodeoxyribonuclease VII large subunit [Thermobifida fusca YX] Length = 406 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 104/365 (28%), Positives = 163/365 (44%), Gaps = 14/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA-- 66 S V + + + L + + G+++ G AY +L+D + + A Sbjct: 5 SSPESPQPVRVVLQAVGGWI-GRLGRIWIEGQVAELHRR--GGMAYITLRDPVANVSARV 61 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 L + PE+G +V K + + + G G LL LE+ ++ Sbjct: 62 TCSIRVLRAADPPPEQGARVVVYAKPDFYVPRGTFSFQALEIRHVGLGELLARLERLRQA 121 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF++ K +PF+P ++ +I A RD+L+ R+P +R + V VQGD Sbjct: 122 LAAEGLFAESRKRKLPFLPGVVGLICGRDSAAERDVLENARRRWPAVRFEVREVAVQGDR 181 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E+ A+ E P D+II+ARGGGS+EDL F+DE +VRA+A + P++S Sbjct: 182 AVPEVMAALE------ELDAHPEVDVIIIARGGGSLEDLLPFSDEALVRAVAAARTPVVS 235 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHE D L DY ADLRA TPT AA+ VP + L R ++ I + Sbjct: 236 AIGHEQDTPLLDYVADLRASTPTDAAKKVVPDVGEQWELIRQLRDRARRVLEGGIAREEA 295 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L S+ L N Q + ++ L L + R + HI R+ + Sbjct: 296 WLASMRSRPVLANPVQEVERKIEQVFDLRDRGRRALTAALDRAGDNLAHIRARLHALSPA 355 Query: 364 HNIQK 368 + + Sbjct: 356 TTLAR 360 Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 41/128 (32%), Gaps = 3/128 (2%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + I + + ++++ + + + + + L R Sbjct: 270 EQWELIRQLRDRARRVLEGGIAREEAWLASMRSR--PVLANPVQEVERKIEQVFDLRDRG 327 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 L+ + +++ L + + TL RGY ++ + + +A + + Sbjct: 328 RRALTAALDRAGDNLAHIRARLHALSPATTLARGYAIVRRADGTVVRSAAEVAPGEELRL 387 Query: 488 NFF-DGQA 494 F DG Sbjct: 388 RFAEDGLV 395 >gi|78485553|ref|YP_391478.1| exodeoxyribonuclease VII large subunit [Thiomicrospira crunogena XCL-2] gi|78363839|gb|ABB41804.1| Exodeoxyribonuclease VII large subunit [Thiomicrospira crunogena XCL-2] Length = 522 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 95/521 (18%), Positives = 181/521 (34%), Gaps = 72/521 (13%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD 59 ++P + + S+S+L ++ + + V V+ E++ GH Y L + Sbjct: 55 LSPGAVPANEKEKGISLSQLMTQVQSALRHSFPGAVWVKAEVANLNERR--GHVYLELSE 112 Query: 60 NH------SRIDAIIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIII 105 + A+IW+ + ++ F E G + L++ ++ + +++ Sbjct: 113 TAESGQPIATCRAMIWQSNVTRLLERFALETGSDLKPGQKILLLAEVNFHEKFG-FSLVV 171 Query: 106 ESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL- 163 + + PS G L L K +++L+ E L+ P P +AVI P A + D Sbjct: 172 QDIDPSFTLGELEANLNKIRQQLIAEKLYDLNKAYPFPEDFFRVAVIAPPNAAGLGDFRA 231 Query: 164 --QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 + F QGD E+ A N L D +I+ RGGG+ Sbjct: 232 DADLLQASSLCEFKYFYTAFQGDRVEAEMLAAFEAFNGLHAANP---FDALIIIRGGGAK 288 Query: 222 EDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281 DL N + + IA ++IP+++ IGHE D TL D A R TP+ H Sbjct: 289 LDLNPLNVYSLAKQIAQTTIPVLTGIGHERDNTLLDEVASTRFDTPSKVIAGI----RHA 344 Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + +I R + + Q+L+ + R + L+ Sbjct: 345 IFNRAQKAQQHWLLIERASQLYVQK----------QKQSLADLEKTVQRQSLAITDKLKR 394 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 ++ + + K+ + Q+ ++ Sbjct: 395 VLAPLNYQIQRQSVSL---------------LQNKKHQLSQLNQEIH------------- 426 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 Q + + ++ I+ ++ + S K L RG Sbjct: 427 -----YQVNGALSLQKQQLNQINQLIKTAPFTCLEQAKNKNKQWIGFILSSGPKTQLNRG 481 Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + I+D I + +++I I F DG AI I++ Sbjct: 482 FAIIKDKQGTPIKTAQKARQQSQIDITFSDGVVQAIPIDET 522 >gi|330892576|gb|EGH25237.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. mori str. 301020] Length = 299 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 119/218 (54%), Gaps = 3/218 (1%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 32 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 89 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + + ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 90 AQVRCALFRQSAAHVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 149 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 K KL +EGLFS + K +P P+ I +I+SPTGAVIRDI+ R P + + + P Sbjct: 150 ALKAKLSDEGLFSAERKIALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTA 209 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGG 218 VQG E ++A ++ + L R G Sbjct: 210 VQGREAINQMAATTQEVASHVNRAADATQQANELTRRG 247 >gi|317482887|ref|ZP_07941894.1| exonuclease VII [Bifidobacterium sp. 12_1_47BFAA] gi|316915661|gb|EFV37076.1| exonuclease VII [Bifidobacterium sp. 12_1_47BFAA] Length = 459 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ + G AY +L+D+ Sbjct: 54 PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 111 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 112 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 168 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 169 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 228 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+ AI QL+ P D+II+ARGGGS EDL F+DE +VRA Sbjct: 229 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 282 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ + Sbjct: 283 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 342 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ +I + L L + +D + L+ L I+ Sbjct: 343 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 402 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 403 ASLTALSPQSTLNR 416 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + E + A +P A D+ Sbjct: 154 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 213 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 214 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 272 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 273 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 331 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 332 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 391 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q + + + ++ I + G Sbjct: 392 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 450 >gi|281412468|ref|YP_003346547.1| exodeoxyribonuclease VII, large subunit [Thermotoga naphthophila RKU-10] gi|281373571|gb|ADA67133.1| exodeoxyribonuclease VII, large subunit [Thermotoga naphthophila RKU-10] Length = 394 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 94/361 (26%), Positives = 169/361 (46%), Gaps = 18/361 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSV+E++ ++K ++E + L++V V GEISG GH +FSL + ++R++ +I+ G Sbjct: 6 YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + +EG LV G ++ + Y+ I ++ + + K L E Sbjct: 64 N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDQAGMYQIKFETTLKKLLEEG 121 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191 + K +P P+ I +ITS A ++D+++ R P+ + +F VQGD +E+ Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ + N D++++ RGGGS EDLW FN+E ++R I P+++ IGHE Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWVFNEEDVIREILKLRHPVVTGIGHEI 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +AD+ AD+ TPTGAAE +P + L + +L + + L +L Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFLEKLIASLSNRFDMEERRLETLY 294 Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + R+ L +L L + + ++S + ++ Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDCFEQDQEKLESLGRMLESLNPLRPLE 354 Query: 368 K 368 + Sbjct: 355 R 355 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 1/130 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + L M+ + + +K+L ++ Sbjct: 266 EDLDSFLEKLIASLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L + + R+L+S L+RG+ ++ + + +L + + F Sbjct: 326 LMDCFEQDQEKLESLGRMLESLNPLRPLERGFVLVK-KEGEIVKESSDLKRGDVVSLVFK 384 Query: 491 DGQANAIVIN 500 DG A VI Sbjct: 385 DGTKKAQVIG 394 >gi|311743711|ref|ZP_07717517.1| exodeoxyribonuclease VII large subunit [Aeromicrobium marinum DSM 15272] gi|311312841|gb|EFQ82752.1| exodeoxyribonuclease VII large subunit [Aeromicrobium marinum DSM 15272] Length = 405 Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats. Identities = 100/370 (27%), Positives = 165/370 (44%), Gaps = 15/370 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 + S D P + ++S + + L V V E++ G + L+D ++ Sbjct: 1 MALDTSPDAPA-PLRQVSQLIGGYI-GRLGAVWVEAEVAQLNRRP--GICFLVLRDLEAK 56 Query: 64 ID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 I A L+ G +V + + + + + I + P+G G LL LE Sbjct: 57 ISVSAKCHASVLDAAAAPVTAGARVVVHARPSFYEPNGSLALDIREIRPAGEGELLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF + K+P+P +P + +IT A RD+LQ R+P +R + V Sbjct: 117 RRKQLLAAEGLFDSRLKHPLPLLPGAVGLITGRDSAAERDVLQNARLRWPAVRFEVRHVL 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + + A+ E P D+I++ARGGGS+EDL F+DE +VRA+A Sbjct: 177 VQGAGSARAVIAAVA------ELDAHPDVDVIVIARGGGSVEDLLPFSDEALVRAVAACR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D + D AD+RA TPT AA+ VP ++ L R + ++I Sbjct: 231 TPVVSAIGHEPDTPILDLVADVRASTPTDAAKRVVPDAREEAVAVAVLRDRAATAVRQMI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+S L + + + + R H + R++ Sbjct: 291 AQQQAGLDSCRSRPVLARPTTVVDEQTAAVLTARDRGRQAVLRRLDRAADEIGHHLARVR 350 Query: 359 SDFLIHNIQK 368 + +Q+ Sbjct: 351 GLSPLATLQR 360 Score = 80.2 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 30/96 (31%), Gaps = 2/96 (2%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + + + R + ++ + ++ + TL+R Sbjct: 301 RSRPVLARPTTVVDEQTAAVLTARDRGRQAVLRRLDRAADEIGHHLARVRGLSPLATLQR 360 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 GY Q + +T ++ + + DGQ A Sbjct: 361 GYAVAQSDDGTVLTSVHDVP--EQFTVRLADGQVLA 394 >gi|318040571|ref|ZP_07972527.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CB0101] Length = 385 Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats. Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 12/352 (3%) Query: 13 PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 P YSV+EL+ + ++E + +S R GH + +L D + I ++W Sbjct: 8 PRYSVAELNQAIASLLERGFAPRFLLEATVS--RPQLKKGHLWLTLVDEQASISGVVWAS 65 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L+K+ P EG LV+GK+ + + + I L PS +L E+ + L EG Sbjct: 66 QLSKLSVQPSEGDGVLVVGKLNFWASRASLCVQILDLRPS-LSAVLRQFERVRCLLEPEG 124 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 L K P+P +P IA++TS + + D+L+ R+P R+ + P+ VQG + Sbjct: 125 LLDPARKQPLPAMPAAIALLTSVPSSALADMLRTAQERWPATRIHVVPIPVQGPVEEQIR 184 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + L E + ++LARGGGS EDL F+ E + R +A +P+++ +GHE Sbjct: 185 SRLAEVLARAGELG----IEALVLARGGGSREDLAVFDSEALARDLAACPLPVVTGLGHE 240 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T+AD AD RA TPT A +P ++HL +L L + ++ + L + Sbjct: 241 DDTTIADLVADYRAATPTAAVVALLPDRQHLGLALQQQRILLRQAVNNRLQQERLRLAAS 300 Query: 311 LKALP--NSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + Q L+ +R + R+ + ++ R + + ++ Sbjct: 301 QERLVALHPRQLLANARQQLQQRIELLHALSPRRLLERGFTLLHGADGQLVR 352 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 1/109 (0%) Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFIL-SHKIKSCHTSVSITTRILQSFAYKNT 457 +LR+ NR+ + R+ + + + + +L + + + Sbjct: 276 QQQRILLRQAVNNRLQQERLRLAASQERLVALHPRQLLANARQQLQQRIELLHALSPRRL 335 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 L+RG+T + + + R ++ + + DG+ N +V P + Sbjct: 336 LERGFTLLHGADGQLVRSVRQVSPGDALQVVLADGRINTVVQTTEPGAD 384 >gi|323359465|ref|YP_004225861.1| exonuclease VII, large subunit [Microbacterium testaceum StLB037] gi|323275836|dbj|BAJ75981.1| exonuclease VII, large subunit [Microbacterium testaceum StLB037] Length = 443 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 103/372 (27%), Positives = 163/372 (43%), Gaps = 14/372 (3%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD-- 59 + ++S SVS L+ ++ +E V V GEI+ + G+ + LKD Sbjct: 17 DSVHPRDSRTDTPTSVSRLNDTIRGFIER-WGSVWVEGEITSFNRR--GGNVFGRLKDLN 73 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 S + IW TL ++ + G + K FP + + I +L G G L Sbjct: 74 TESTVAFRIWSSTLARLPKDFQVGDHVVACVKADYFPRTGDFSFAISALRHVGLGEQLER 133 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 LE+ + +L EGLF K +PF+P I +IT +D+ + R+P + Sbjct: 134 LERLRAQLRSEGLFDPVRKKKLPFLPHCIGLITGENSDAEKDVHRNAELRWPRVNFRTKY 193 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 VQGD C E A+ L+ P D+II+ARGGG + L F+DE +VRA+A Sbjct: 194 AAVQGDRCVPETLAALKALDA------DPEVDVIIIARGGGDPQTLLGFSDERLVRAVAA 247 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 +S P++SAIGHE D L D ADLRA TPT AA+ VP ++ + L ARL + + Sbjct: 248 ASTPVVSAIGHENDRPLLDDVADLRASTPTDAAKRVVPDVAEQRALVAQLRARLTGRLTQ 307 Query: 299 L--IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 +L L+ L L ++ + + R + Sbjct: 308 RVLHDIAQLEQIRSRPSLRTPHAMLTSRAQELWMLSNRGRDIVDRRLESERRRTRELSAS 367 Query: 357 IKSDFLIHNIQK 368 +++ + + + Sbjct: 368 LRALSPLATLAR 379 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 34/127 (26%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q L Q + R + + + + + L R I Sbjct: 290 QRALVAQLRARLTGRLTQRVLHDIAQLEQIRSRPSLRTPHAMLTSRAQELWMLSNRGRDI 349 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +++S + L++ + TL RGY Q + + I Sbjct: 350 VDRRLESERRRTRELSASLRALSPLATLARGYAIAQVEGGAIVRDASQAPAGAALTITVE 409 Query: 491 DGQANAI 497 G A Sbjct: 410 RGSLAAR 416 >gi|227494770|ref|ZP_03925086.1| exodeoxyribonuclease VII [Actinomyces coleocanis DSM 15436] gi|226831770|gb|EEH64153.1| exodeoxyribonuclease VII [Actinomyces coleocanis DSM 15436] Length = 423 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 12/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P +++ + +++LS ++K VE +S + V +I ++ ++ +L+D Sbjct: 10 PRLARDTTREHPWPLAKLSENIKIYVEK-MSPLWVEAQIVQLSDRGATKMSFLTLRDVDQ 68 Query: 63 RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I + L+ G + K T + S + + + + P G G LL + Sbjct: 69 DISMEVSAFGNVLSTSGIPITPGSRVVAHVKPTFWTKSGRLALQAKEISPVGLGDLLARI 128 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E ++KL EGLF ++ K P+PF+P+ I +I D+L S R+P + I V Sbjct: 129 ELLRQKLHAEGLFDEERKKPLPFLPRKIGLICGNNAKAKDDVLVNASTRWPAAQFEIREV 188 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + A L E P D+I++ARGGGS+EDL F+DE IVRA+ + Sbjct: 189 LVQGAGAVAGVTQA------LAELDRIPDVDVIVIARGGGSVEDLLPFSDEAIVRAVFAA 242 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D L D AD RA TPT AA VP L N L + Sbjct: 243 HTPVVSAIGHEGDSPLMDLVADYRASTPTDAARRVVPDLTAELQGLGNAVMELRKRVQTR 302 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ + L LL L +L L+ +L+H + + + + N ++ + Sbjct: 303 VESEQQHLQLLLDRPVLATPAASLQSHFEGLETARAKLKHVVSLKLTQAQADLNSAVSTL 362 Query: 358 KSDFLIHNIQK 368 K+ +++ Sbjct: 363 KAISPQATLER 373 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 55/162 (33%), Gaps = 5/162 (3%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 ++ ++ ++ + + Q + V + + + + + L +L ++ Sbjct: 258 LMDLVADYRASTPTDAARRVVPDLTAELQGLGNAVMELRKRVQTRVESEQQHLQLLLDRP 317 Query: 410 -----KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 + ++ +++ ++S K+ ++ L++ + + TL+RGY+ Sbjct: 318 VLATPAASLQSHFEGLETARAKLKHVVSLKLTQAQADLNSAVSTLKAISPQATLERGYSI 377 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 I+ +T + + G V P Sbjct: 378 IKAPGKGVLTDTSQVKKGEILEARLAHGSMIVTVFGTNAPPS 419 >gi|172055120|ref|YP_001806447.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. ATCC 51142] gi|171701401|gb|ACB54381.1| exodeoxyribonuclease VII large subunit [Cyanothece sp. ATCC 51142] Length = 395 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 121/327 (37%), Positives = 180/327 (55%), Gaps = 13/327 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRIDAIIWK 70 SV+ L+ ++K ++E + L V V GE+S +H G +F+L DN + I ++W Sbjct: 21 LSVAGLTEYIKLLLEEDPQLIQVWVTGEVSSL-HVHRMG-VFFTLSDNKGQATIKCVVWN 78 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 +++ LP+ G+E LV+G + + +YQ+ + ++ +G G ++ K +L E Sbjct: 79 SQKDRLLELPKLGVEILVMGNVRLYAKKGEYQLTVFQVLATGEGLQALRYQQLKNRLASE 138 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 GLF K +P P+IIAV+T+ T A DI + +S R P ++V+ P VQG E P Sbjct: 139 GLFDTSLKRSLPSFPQIIAVVTAATAAAWGDIQKTLSQRNPGVKVLFSPATVQGKEAPSS 198 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI ++N R ++IILARGGG++EDL+ FNDE +VRAI+ SSIP+I+ IGH Sbjct: 199 IVKAIERVN------HDGRAELIILARGGGAVEDLFCFNDERVVRAISESSIPVITGIGH 252 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D TLAD AD+ A TPT AAEMAVP E L+ RL I + ++ + L S Sbjct: 253 QRDETLADLVADVNAHTPTAAAEMAVPSYEVLRIEHQQRSYRLLASIKQRLRQESEQLAS 312 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELE 336 L K L N R R + Sbjct: 313 LKKRLKNLPVNAVSLREAKMRTLMLKQ 339 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 39/109 (35%), Gaps = 2/109 (1%) Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH--KIKSCHTSVSITTRILQSF 452 + E + L K R+ + L R++ + + ++ + + L++ Sbjct: 285 RIEHQQRSYRLLASIKQRLRQESEQLASLKKRLKNLPVNAVSLREAKMRTLMLKQKLEAL 344 Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 L+RG++ ++ + I + + L + I G+ V Sbjct: 345 DPHAVLERGFSVVRQIDGEIIRESKQLREGQELTIQLPQGKIKVKVTEI 393 >gi|46190970|ref|ZP_00206628.1| COG1570: Exonuclease VII, large subunit [Bifidobacterium longum DJO10A] gi|189440790|ref|YP_001955871.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum DJO10A] gi|189429225|gb|ACD99373.1| Exonuclease VII large subunit [Bifidobacterium longum DJO10A] Length = 452 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ + G AY +L+D+ Sbjct: 47 PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 104 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 162 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+ AI QL+ P D+II+ARGGGS EDL F+DE +VRA Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 275 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ + Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 335 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ +I + L L + +D + L+ L I+ Sbjct: 336 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 396 ASLTALSPQSTLNR 409 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + E + A +P A D+ Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 265 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 325 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q + + + ++ I + G Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 443 >gi|23466295|ref|NP_696898.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum NCC2705] gi|227546651|ref|ZP_03976700.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. infantis ATCC 55813] gi|322689750|ref|YP_004209484.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. infantis 157F] gi|322691699|ref|YP_004221269.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|23327047|gb|AAN25534.1| exonuclease VII, large subunit [Bifidobacterium longum NCC2705] gi|227212968|gb|EEI80847.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. infantis ATCC 55813] gi|320456555|dbj|BAJ67177.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|320461086|dbj|BAJ71706.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. infantis 157F] Length = 456 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ + G AY +L+D+ Sbjct: 51 PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 108 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 109 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 165 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 166 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 225 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+ AI QL+ P D+II+ARGGGS EDL F+DE +VRA Sbjct: 226 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 279 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ + Sbjct: 280 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 339 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ +I + L L + +D + L+ L I+ Sbjct: 340 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 399 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 400 ASLTALSPQSTLNR 413 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + E + A +P A D+ Sbjct: 151 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 210 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 211 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 269 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 270 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 328 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 329 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 388 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q + + + ++ I + G Sbjct: 389 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 447 >gi|291516292|emb|CBK69908.1| Exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. longum F8] Length = 452 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ + G AY +L+D+ Sbjct: 47 PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 104 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 162 AMIDELRKQLNGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+ AI QL+ P D+II+ARGGGS EDL F+DE +VRA Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 275 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ + Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 335 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ +I + L L + +D + L+ L I+ Sbjct: 336 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 396 ASLTALSPQSTLNR 409 Score = 97.5 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 86/299 (28%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + N E + A +P A D+ Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKQLNGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 265 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 325 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q + + + ++ I + G Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 443 >gi|312134043|ref|YP_004001382.1| xsea [Bifidobacterium longum subsp. longum BBMN68] gi|311773350|gb|ADQ02838.1| XseA [Bifidobacterium longum subsp. longum BBMN68] Length = 454 Score = 205 bits (521), Expect = 2e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ +G AY +L+D+ Sbjct: 47 PARAAETTAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTR-RTGSAYITLRDDFE 104 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 162 AMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+ AI QL+ P D+II+ARGGGS EDL F+DE +VRA Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPNVDVIIVARGGGSFEDLIGFSDERVVRAA 275 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ + Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLQV 335 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + +I + L L + +D + L+ L I+ Sbjct: 336 RSRAENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 396 ASLTALSPQSTLNR 409 Score = 92.5 bits (228), Expect = 2e-16, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 86/299 (28%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDLWH-----FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + E + A +P A D+ Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPNVDVIIVARGGGSFEDLIG 265 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 325 EGAIDRMRLQVRSRAENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q + + + ++T I + G Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASRVSTGDDITVTLKKGVI 443 >gi|260435825|ref|ZP_05789795.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 8109] gi|260413699|gb|EEX06995.1| exodeoxyribonuclease VII, large subunit [Synechococcus sp. WH 8109] Length = 387 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 93/325 (28%), Positives = 163/325 (50%), Gaps = 9/325 (2%) Query: 13 PEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 P YSV+EL+ + ++E + +S R GH + +L D + I +++W Sbjct: 7 PTYSVAELNTAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLTDGSASISSVVWAS 64 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L ++ + P++G V+GK+ + + + + PS T+L E+ ++ L +E Sbjct: 65 KLAQLSYQPKDGDGVTVVGKLNFWAARASLTVQALDIRPS-LSTVLRDFERVRQLLEQEE 123 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEI 190 + + + P+P P IAV+TS + + D+L+ + R+PL ++I+ P+ VQG P I Sbjct: 124 VIDPRRRRPLPSQPSSIAVLTSVPSSALADMLRTAAERWPLTQLIVVPIPVQGSVAPTII 183 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + +L E T ++LARGGGS EDL F++E++ R +A+ IP+++ +GHE Sbjct: 184 STLE----SLAERSTELGLQALVLARGGGSREDLAVFDNEVLCRLLAHYPIPVVTGLGHE 239 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D T+AD AD RA TPT A +P +E L+ ++RL ++ I + L Sbjct: 240 DDLTVADLVADHRAATPTAAIVALLPDREAEHQGLVQRQSRLKEALLGRIHRERQRLQDR 299 Query: 311 LKALPNSDQTLSCSRYRLDRLPREL 335 AL R+R + + Sbjct: 300 AIALQQQSPLEKIRRFRQELAQKHQ 324 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 1/120 (0%) Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF-ILSHKIKSCHTSVSITTRIL 449 E + + L+E RI ++ ++ KI+ ++ ++L Sbjct: 267 REAEHQGLVQRQSRLKEALLGRIHRERQRLQDRAIALQQQSPLEKIRRFRQELAQKHQLL 326 Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPT 509 ++ + + LKRG I + I+ ++ ++ I DG A V T Sbjct: 327 KALSPERWLKRGLALISNEAGESISSLESVKIGDQLNIRVSDGNLEARVDQIQRSDPNTT 386 >gi|282880818|ref|ZP_06289514.1| exodeoxyribonuclease VII, large subunit [Prevotella timonensis CRIS 5C-B1] gi|281305352|gb|EFA97416.1| exodeoxyribonuclease VII, large subunit [Prevotella timonensis CRIS 5C-B1] Length = 431 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 91/505 (18%), Positives = 172/505 (34%), Gaps = 98/505 (19%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 ++ EL+ + +++ + V E+S R + GH Y L KD ++ A Sbjct: 5 LTLYELNELVSETLQTVMPDEYWVEAELSEVREVR--GHCYMELVQKDEQTNTPIAKASA 62 Query: 67 IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 WK + G++ L+ + II + P G + Sbjct: 63 KCWKNKWMLMRPYFERMTGQSLRAGMKVLLKVYANFHEAYG-FSWIITDIDPVYTMGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174 ++ +L EG+F Q + +P + +AV++S A D L+++ V Sbjct: 122 RKRQEIIAQLKAEGVFDLQKELTLPLFAQRVAVVSSEQAAGYGDFLRQLQDNDAGLCFDV 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + NA+ Q+N D++++ RGGG+ DL F+ ++ Sbjct: 182 QLFPAVMQGEKVEQSVINALNQIN-----NQVDNFDVVVIIRGGGATSDLSGFDTILLAE 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PII+ IGH+ D ++ D + R TPT AA V + + + E + Sbjct: 237 NVANFPLPIITGIGHDRDESVLDMISFQRVKTPTAAAAYLVEHLRNTWHRIDDAEQEIIQ 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 I+ ++ + N + L +P + + H+ Sbjct: 297 IVRHAMELEKNRFDLLTSKIPFLFSRVKLQQ------------------------LTHLQ 332 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 QQ + + H+ + A L ++ + Sbjct: 333 QC--------------------QQRLTTSARLHVHKAQQHIEVHSARLFPTIQRL---LL 369 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 H+ L R +L + LKRGY+ + Sbjct: 370 DTRHHLNLLEQR-------------------CSLLD---PQLLLKRGYSITLH-QGRAVR 406 Query: 475 QKRNLATKTRILINFFDGQANAIVI 499 L I G + V Sbjct: 407 NAHQLKAGDEIETRVEKGIIKSTVK 431 >gi|283456549|ref|YP_003361113.1| exodeoxyribonuclease VII large subunit XseA [Bifidobacterium dentium Bd1] gi|283103183|gb|ADB10289.1| xseA Exodeoxyribonuclease VII large subunit [Bifidobacterium dentium Bd1] Length = 439 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V V G+I+ + G AY +L+D++ Sbjct: 27 PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 84 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + +++I +G+G +L Sbjct: 85 DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 141 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176 +++ +KKL EGLF K P+P P I +I +P D++ + R+P+ + Sbjct: 142 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 201 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP ++ AI ++ P D+II+ARGGG+ EDL F+DE +VRA Sbjct: 202 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 255 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A + P+ISAIGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 256 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 315 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 I ++ + L L + LD + L I+ Sbjct: 316 DATIANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 375 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 376 ASLTALSPQSTLNR 389 Score = 94.1 bits (232), Expect = 5e-17, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 57/169 (33%), Gaps = 5/169 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399 ++ +++ +K + E+ Q H++++ + I E + Sbjct: 268 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATIANEMRLVE 327 Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + Q + + +R+ L+ + ++ + L + + ++TL Sbjct: 328 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 387 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 RGY IQ + + I N+ + + G + V + Q Sbjct: 388 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 436 >gi|212715439|ref|ZP_03323567.1| hypothetical protein BIFCAT_00335 [Bifidobacterium catenulatum DSM 16992] gi|225351561|ref|ZP_03742584.1| hypothetical protein BIFPSEUDO_03157 [Bifidobacterium pseudocatenulatum DSM 20438] gi|212661614|gb|EEB22189.1| hypothetical protein BIFCAT_00335 [Bifidobacterium catenulatum DSM 16992] gi|225157905|gb|EEG71188.1| hypothetical protein BIFPSEUDO_03157 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 426 Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats. Identities = 101/372 (27%), Positives = 163/372 (43%), Gaps = 15/372 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN-- 60 P + + VS LS VE V V G+I+ G AY +L+D+ Sbjct: 20 PRLAGETTADNPWPVSLLSEKFHMAVER-WPSVWVAGQITQINTRRQ-GSAYITLRDDYQ 77 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLLTA 119 ++ + G +G ++ GK + + + +++I +G+G +L Sbjct: 78 DIALEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLKAM 136 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178 +++ +KKL EGLF K P+P P I +I +P D++ + R+P+ + Sbjct: 137 IDELRKKLKGEGLFDADRKQPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVVDFKVTH 196 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG++CP ++ AI Q++ P D+II+ARGGG+ EDL F+DE +VRA A Sbjct: 197 VHVQGEQCPSDVIKAIAQMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAAAA 250 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P+ISAIGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 251 AHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVREQMQLINVNIERMRMRIDA 310 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + + L L + +D + L I+ Sbjct: 311 TVNNETRLIEGYANRPSLTQPLTMLEPHQRLIDDARTRMRIGLTRILDDASLTIEKAHAS 370 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 371 LTALSPQSTLNR 382 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 22/176 (12%), Positives = 52/176 (29%), Gaps = 7/176 (3%) Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + I ++ +++ +K + E Q + + + +R Sbjct: 252 HTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVRE-QMQLINVNIERMRMRIDA 310 Query: 395 KKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 L Q + I TR+ L+ + ++ Sbjct: 311 TVNNETRLIEGYANRPSLTQPLTMLEPHQRLIDDARTRMRIGLTRILDDASLTIEKAHAS 370 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 L + + ++TL RGY +Q + + I + T ++ + G + V Sbjct: 371 LTALSPQSTLNRGYAVVQGADGHVIDDANAVNTGDQLTMTLKHGVIVSEVTTVTKE 426 >gi|296454675|ref|YP_003661818.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. longum JDM301] gi|296184106|gb|ADH00988.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium longum subsp. longum JDM301] Length = 458 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ + G AY +L+D+ Sbjct: 51 PARAAETSAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 108 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 109 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 165 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 166 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 225 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+ AI QL+ P D+II+ARGGGS EDL F+DE +VRA Sbjct: 226 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 279 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ + Sbjct: 280 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 339 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ +I + L L + +D + L+ L I+ Sbjct: 340 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 399 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 400 ASLTALSPQSTLNR 413 Score = 91.0 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 87/299 (29%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + E + A +P A D+ Sbjct: 151 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 210 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 211 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 269 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 270 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 328 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 329 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 388 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q ++ + + ++T I + G Sbjct: 389 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSSDGHVLDDASRVSTGDDITVTLKKGVI 447 >gi|213691511|ref|YP_002322097.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522972|gb|ACJ51719.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457587|dbj|BAJ68208.1| exodeoxyribonuclease VII large subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 452 Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ + G AY +L+D+ Sbjct: 47 PARAAETSAQNPWPVSVLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 104 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 105 DI--AMEVNGF-GRFAAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 161 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 162 AMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 221 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+ AI QL+ P D+II+ARGGGS EDL F+DE +VRA Sbjct: 222 VHVHVQGEQCPAEVVQAIAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAA 275 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ + Sbjct: 276 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRV 335 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ +I + L L + +D + L+ L I+ Sbjct: 336 RSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAH 395 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 396 ASLTALSPQSTLNR 409 Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 86/299 (28%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + E + A +P A D+ Sbjct: 147 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 206 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 207 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 265 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 266 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 324 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 325 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 384 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q ++ + + ++ I + G Sbjct: 385 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSSDGHVLDDASQVSPGDDITVTLKKGVI 443 >gi|124021951|ref|YP_001016258.1| exonuclease VII, large subunit [Prochlorococcus marinus str. MIT 9303] gi|123962237|gb|ABM76993.1| Exonuclease VII, large subunit [Prochlorococcus marinus str. MIT 9303] Length = 385 Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats. Identities = 98/330 (29%), Positives = 163/330 (49%), Gaps = 9/330 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + P YSV +L+ + ++E V +S + GH + +L D ++ I A Sbjct: 2 TAESLPNYSVRDLNAAIGTLLERGFAPRFLVEASVS--KPQIKKGHLWLTLTDGNASITA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + W L ++ + P EG V+GK+ + + + + L PS T+L E K Sbjct: 60 VAWASKLQQLTYRPAEGDGVTVVGKLNFWATRASLAVQVIDLRPS-LSTVLRQFEIVKAL 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 LL+EG+ + + +P P++IA++TS + + D+L+ R+PL +++I P+ VQG Sbjct: 119 LLKEGIIDESKRKALPKYPEVIAILTSVPSSALADMLRTAKERWPLTQLLIIPIPVQG-G 177 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K+I + + +L I+LARGGGS EDL F+DE + R +A+ IP+++ Sbjct: 178 VAKQIQSVLR---SLANQHDELGIAAIVLARGGGSREDLMVFDDEDLCRDLASFPIPVVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+AD AD RA TPT A +P +E Q+ L+ RL + LI+ ++ Sbjct: 235 GLGHEDDQTVADLVADHRAATPTAAMVALLPSRESAQNVLVQRRHRLKDHCNWLIRKELE 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 L KAL R+ + Sbjct: 295 RLVDRGKALERQQPLKQIELQRIHLSQKHQ 324 Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 52/136 (38%), Gaps = 5/136 (3%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL-HTHIKKLITRIEFILSHK- 434 H + + ++ +L R + K+ +L +++L+ R + + + Sbjct: 249 ADHRAATPTAAMVALLPSRESAQNVLVQRRHRLKDHCNWLIRKELERLVDRGKALERQQP 308 Query: 435 ---IKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD 491 I+ +S ++LQ+ + + L RG+ +++ + +++ + I D Sbjct: 309 LKQIELQRIHLSQKHQLLQALSPELWLMRGFAIVKNKQGKTLQSVGDVSLLDNLTIQLSD 368 Query: 492 GQANAIVINKAPPKEQ 507 GQ NA + Sbjct: 369 GQINATAEEINQQRPS 384 >gi|289761247|ref|ZP_06520625.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis GM 1503] gi|289708753|gb|EFD72769.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis GM 1503] Length = 274 Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 11/277 (3%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID- 65 +NS ++P + V ++ + ++ L V V G+++ + + L+D + + Sbjct: 3 QNSAENP-FPVRAVAIRVAGWIDK-LGAVWVEGQLAQITMRPDAKTVFMVLRDPAADMSL 60 Query: 66 -AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 + + EG++ +V GK + + G + + + + G G LL +++ + Sbjct: 61 TVTCSRDLVLSAPVKLAEGVQVVVCGKPSFYTGRGTFSLRLSEIRAVGIGELLARIDRLR 120 Query: 125 KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQG 183 + L EGLF + K PIP++P +I +IT A RD+ S R+P R + V VQG Sbjct: 121 RLLDAEGLFDPRLKRPIPYLPNMIGLITGRASAAERDVTTVASARWPAARFAVRNVAVQG 180 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 +I A L+E P D+I+LARGGGS+EDL F+DE + RAIA P+ Sbjct: 181 PNAVGQIVEA------LRELDRDPDVDVIVLARGGGSVEDLLPFSDETLCRAIAACRTPV 234 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEH 280 +SA+GHE D L D DLRA TPT AA+ VP + Sbjct: 235 VSAVGHEPDNPLCDLVVDLRAATPTDAAKKVVPTPQP 271 >gi|119026235|ref|YP_910080.1| exodeoxyribonuclease VII large subunit [Bifidobacterium adolescentis ATCC 15703] gi|118765819|dbj|BAF39998.1| exonuclease VII, large subunit [Bifidobacterium adolescentis ATCC 15703] Length = 426 Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats. Identities = 104/374 (27%), Positives = 163/374 (43%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V V G+I+ G AY +L+D+ Sbjct: 20 PRLASETTADNPWPVSLLSEKFYTAVER-WPSVWVAGQITQINTRRQ-GSAYITLRDDQQ 77 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + +++I +G+G +L Sbjct: 78 DI--AMEVNGF-GRFAAAAAPFVQGDRVIIHGKPNVWMKRTSLSLRGDAIIAAGAGGSLK 134 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VII 176 +++ +KKL EGLF K P+P P I +I +P D++ + R+P+ + Sbjct: 135 AMIDELRKKLKGEGLFDADRKKPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVVGFKV 194 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP ++ AI QL+ P D+II+ARGGG+ EDL F+DE +VRA Sbjct: 195 THVHVQGEQCPSDVVAAIRQLDA------DPDVDVIIVARGGGAFEDLIGFSDENVVRAA 248 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A + P+ISAIGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 249 AAAHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVHEQMQLIQVNLDRMRVRI 308 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + L L + LD + L I+ Sbjct: 309 DATVSNETRLIEGYANRPSLTQPLTMLEPHQRFLDDARTRMRIGLTRILDDASLTIEKAH 368 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 369 ASLTALSPQSTLDR 382 Score = 93.7 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 6/142 (4%) Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 +Q + ++ + I+ V R I Q + + Sbjct: 291 HEQMQLIQVNLDRMRVRIDATVSNETRLIEGYANR------PSLTQPLTMLEPHQRFLDD 344 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 TR+ L+ + ++ L + + ++TL RGY +Q + + + + T Sbjct: 345 ARTRMRIGLTRILDDASLTIEKAHASLTALSPQSTLDRGYAVVQCADGHVLDDADKVKTG 404 Query: 483 TRILINFFDGQANAIVINKAPP 504 ++ + G + V Sbjct: 405 DQLTMTLKHGIVVSEVKTVTKE 426 >gi|163839901|ref|YP_001624306.1| exodeoxyribonuclease VII large subunit [Renibacterium salmoninarum ATCC 33209] gi|162953377|gb|ABY22892.1| exodeoxyribonuclease VII large subunit [Renibacterium salmoninarum ATCC 33209] Length = 433 Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 168/371 (45%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + + LS LK ++ V G++ + +Y +L+D + Sbjct: 23 PTTAAETTADRPWPLRMLSEKLKAHIDRA-PAAWVEGQVIELNRRANI--SYLTLRDVDA 79 Query: 63 RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I ++ L+ + E G + K + + + + + G G LL + Sbjct: 80 EISLSVTLFGSALDAMAVPLERGARVVAQLKPDFWMKTGRLSMQGRQIKAVGLGDLLARI 139 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E ++ L EG+F + K +P +P I +IT ++D+L+ + R+P ++ + V Sbjct: 140 EALRQALAAEGIFDAERKKKLPLLPNRIGLITGRDSDAMKDVLRNATLRWPAVQFEVREV 199 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +++ A L E R D+I++ARGGGS+EDL F++E ++RA++ + Sbjct: 200 AVQGVNSVSQVSAA------LAELDADDRVDVIVIARGGGSLEDLLGFSNETLIRAVSAA 253 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D L D ADLRA TPT AA+ VP + +L + Sbjct: 254 HTPVVSAIGHEADRPLLDEVADLRASTPTDAAKRIVPDLAEELGLVNQARYQLQRSLTLF 313 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + L L L D ++ R L RL ++ ++ R H+++++ Sbjct: 314 LHREQDRLQQLRSRPVLAQPDGMIAVRREDLVRLQDRAFGSISTMVARHQDTLAHLLSQV 373 Query: 358 KSDFLIHNIQK 368 +S + + Sbjct: 374 RSLSPQKTLDR 384 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 58/157 (36%), Gaps = 5/157 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----EQT 409 +++ ++ + E+ + Q Q R + L + L LR Q Sbjct: 274 ADLRASTPTDAAKRIVPDLAEELGLVNQARYQLQRSLTLFLHREQDRLQQLRSRPVLAQP 333 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 I + +L R +S + +++ ++S + + TL RGY +Q ++ Sbjct: 334 DGMIAVRREDLVRLQDRAFGSISTMVARHQDTLAHLLSQVRSLSPQKTLDRGYAVLQLSD 393 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 ++ T + + G +A+ KA P++ Sbjct: 394 GAVVSSPDQAPDGTSLRVRLARGMIDAVSQGKASPQK 430 >gi|291457374|ref|ZP_06596764.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium breve DSM 20213] gi|291381209|gb|EFE88727.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium breve DSM 20213] Length = 455 Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats. Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V G+I+ + G AY +L+D+ Sbjct: 50 PRLAAETTAQNPWPVSMLSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFE 107 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + ++++ G+G +L Sbjct: 108 DI--AMEVNGF-GRFADTARQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLK 164 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVII 176 +++ +K+L EGLF HK P+P PK I +I +P D++ ++ R+P + + Sbjct: 165 AMIDELRKRLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKV 224 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP E+A AI +L T P D+II+ARGGGS EDL F+DE +VRA Sbjct: 225 VHVHVQGEQCPGEVAQAIARL------DTDPDVDVIIVARGGGSFEDLMGFSDERVVRAA 278 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + P+IS+IGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 279 YACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVNEQTQLITGAIDRMRLRI 338 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + L L + +D + L+ L I+ Sbjct: 339 RSRVDNEDRLIEGYANRPSLTQPLTMLEPHQRLIDDSIQRLDIGLRRIVDDAQLTVEKAH 398 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 399 ASLTALSPQSTLNR 412 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 23/176 (13%), Positives = 49/176 (27%), Gaps = 8/176 (4%) Query: 326 YRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R+ R L I ++ +++ ++ + E Q + Sbjct: 272 ERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVNE-QTQLITGA 330 Query: 385 KQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 +R + + L Q + I I R++ L + Sbjct: 331 IDRMRLRIRSRVDNEDRLIEGYANRPSLTQPLTMLEPHQRLIDDSIQRLDIGLRRIVDDA 390 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q + + I + G Sbjct: 391 QLTVEKAHASLTALSPQSTLNRGYAVVQSADGTVLDDASTAHIGDDITVTLKKGVI 446 >gi|33239563|ref|NP_874505.1| exonuclease VII, large subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237088|gb|AAP99157.1| Exonuclease VII, large subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 384 Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats. Identities = 91/323 (28%), Positives = 157/323 (48%), Gaps = 9/323 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 N P +SV EL+ + +++ + +S + +GH + +L D + I A Sbjct: 2 NKDTVPHFSVGELNQAIGNLLSRGFAPTFLLHATVS--KAQLKNGHLWLTLTDGKASISA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +IW +L I F P E ++GK+ + + + + + P+ T+L E + Sbjct: 60 VIWSSSLKNISFRPVEEDGVELLGKLNFWQNRATLVVQVIQIRPT-LSTVLRQFEVVRSL 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L+ EGL +D+ + P+P P IA+ TS + D+L+ R+PL ++++ + VQG+ Sbjct: 119 LVNEGLIADERRRPLPRFPSAIAIFTSVPSSAYADMLRTAKERWPLTKLLVVAIPVQGEV 178 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K L+ L + ++LARGGGS EDL F++E + R +A IP+I+ Sbjct: 179 SVKIR----EALSKLADSYLHLGVQALVLARGGGSREDLMVFDNEELCRQLAEFPIPVIT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+AD AD R+ TPT A +P +E +++ I L AR + + I+ K Sbjct: 235 GLGHEDDLTVADLVADHRSATPTAAIVDLLPSREMAKNNCIQLRARFKDYVTWTIQNKSR 294 Query: 306 TLNSLLKALPNSDQTLSCSRYRL 328 + L N L + + Sbjct: 295 EILDRKNTLVNFSPFLQLRKQKQ 317 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 44/127 (34%), Gaps = 6/127 (4%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + + + + + I + + +++ Sbjct: 263 LLPSREMAKNNCIQLRARFKDYVTWTIQNKSREILDRKNTLVNFSPFL------QLRKQK 316 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 +S T++L + + + LKRG+ +++ + + ++L ++ I DG ++ V Sbjct: 317 QLLSQMTKLLIALSPTSLLKRGFCIVRNNLDTAVKSVKDLKVGDQVTIELSDGYTHSKVQ 376 Query: 500 NKAPPKE 506 P K+ Sbjct: 377 TIFPNKK 383 >gi|154489084|ref|ZP_02029933.1| hypothetical protein BIFADO_02394 [Bifidobacterium adolescentis L2-32] gi|154083221|gb|EDN82266.1| hypothetical protein BIFADO_02394 [Bifidobacterium adolescentis L2-32] Length = 426 Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats. Identities = 104/374 (27%), Positives = 163/374 (43%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V V G+I+ G AY +L+D+ Sbjct: 20 PRLASETTADNPWPVSLLSEKFYTAVER-WPSVWVAGQITQINTRRQ-GSAYITLRDDQQ 77 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + +++I +G+G +L Sbjct: 78 DI--AMEVNGF-GRFAAAAAPFVQGDRVIIHGKPNVWMKRTSLSLRGDAIITAGAGGSLK 134 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VII 176 +++ +KKL EGLF K P+P P I +I +P D++ + R+P+ + Sbjct: 135 AMIDELRKKLKGEGLFDADRKKPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVVGFKV 194 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP ++ AI QL+ P D+II+ARGGG+ EDL F+DE +VRA Sbjct: 195 THVHVQGEQCPSDVVAAIRQLDA------DPDVDVIIVARGGGAFEDLIGFSDENVVRAA 248 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A + P+ISAIGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 249 AAAHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVHEQMQLIQVNLDRMRMRI 308 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + L L + LD + L I+ Sbjct: 309 DATVSNETRLIEGYANRPSLTQPLTMLEPHQRFLDDARTRMRIGLTRILDDASLTIEKAH 368 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 369 ASLTALSPQSTLDR 382 Score = 94.1 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 6/142 (4%) Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 +Q + ++ + I+ V R I Q + + Sbjct: 291 HEQMQLIQVNLDRMRMRIDATVSNETRLIEGYANR------PSLTQPLTMLEPHQRFLDD 344 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 TR+ L+ + ++ L + + ++TL RGY +Q + + + + T Sbjct: 345 ARTRMRIGLTRILDDASLTIEKAHASLTALSPQSTLDRGYAVVQCADGHVLDDADKVKTG 404 Query: 483 TRILINFFDGQANAIVINKAPP 504 ++ + G + V Sbjct: 405 DQLTMTLKHGIVVSEVKTVTKE 426 >gi|309802821|ref|ZP_07696923.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium dentium JCVIHMP022] gi|308220574|gb|EFO76884.1| exodeoxyribonuclease VII, large subunit [Bifidobacterium dentium JCVIHMP022] Length = 449 Score = 204 bits (518), Expect = 4e-50, Method: Composition-based stats. Identities = 102/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V V G+I+ + G AY +L+D++ Sbjct: 37 PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 94 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + +++I +G+G +L Sbjct: 95 DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 151 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176 +++ +KKL EGLF K P+P P I +I +P D++ + R+P+ + Sbjct: 152 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 211 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP ++ AI ++ P D+II+ARGGG+ EDL F+DE +VRA Sbjct: 212 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 265 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A + P+ISAIGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 266 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 325 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + ++ + L L + LD + L I+ Sbjct: 326 DATVANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 385 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 386 ASLTALSPQSTLNR 399 Score = 94.1 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 5/169 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399 ++ +++ +K + E+ Q H++++ + + E + Sbjct: 278 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATVANEMRLVE 337 Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + Q + + +R+ L+ + ++ + L + + ++TL Sbjct: 338 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 397 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 RGY IQ + + I N+ + + G + V + Q Sbjct: 398 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 446 >gi|148653171|ref|YP_001280264.1| exodeoxyribonuclease VII large subunit [Psychrobacter sp. PRwf-1] gi|148572255|gb|ABQ94314.1| Exodeoxyribonuclease VII large subunit [Psychrobacter sp. PRwf-1] Length = 508 Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats. Identities = 96/520 (18%), Positives = 183/520 (35%), Gaps = 69/520 (13%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--K 58 +P + L++ +S+ ++ +V+ H V V+ EI GH YF L K Sbjct: 31 DPIDDE--LENTVLRLSDYLAAVELVVKETFRHSVWVKAEIRNLSSK--GGHYYFELAEK 86 Query: 59 DNH----SRIDAIIWKGTLNKI--EFLPEEGIE----FLVIGKIT-TFPGSSKYQIIIES 107 D+ + +W+ ++ +F G++ V+ ++ TF + + I Sbjct: 87 DDEGKVIASCRGNLWRFKAARVLTKFERATGMKLDRDVTVLLNVSATFHPLYGFSLAIND 146 Query: 108 LIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166 + PS G L ++L EGL + + P PF + + VI A + D Sbjct: 147 IDPSYTLGDLARQYAAMLEQLSAEGLLNLNKQVPPPFDIEHVLVIAPEKAAGLGDFQADA 206 Query: 167 SC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 + QG+ PKEI +AI + + + + PD++++ RGGG++ D Sbjct: 207 NRLEGTGACHFHYHHATFQGNHAPKEIRHAITKGMLVFKKQYERLPDVMVIIRGGGAVGD 266 Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283 L + ND + +A IP+ IGHE D + D A TP+ Sbjct: 267 LAYLNDYELAALVAEQPIPVWVGIGHERDNVILDEVAHTSFDTPSKVIAGIT-------- 318 Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + + ++ D + + L Sbjct: 319 -------------------------------NHLASLMQRTQDYADAIQHISQQQLNQAA 347 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 R FN I N +N+Q+ + I+Q K LR + K + + Sbjct: 348 MATERQFNTIQN-----SSSYNLQRWQHLSDSHFNSIKQHAKFELREASMTAKTNMQRIQ 402 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 L + + + L ++ ++ V +++ L +GY Sbjct: 403 QLSYS---HLSRANASMDSLYQALKNSSYKRLDDAERQVRYYQQVVLIQNPARLLDQGYA 459 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 +Q+ +N +++ + + I DG+ A+V Sbjct: 460 FVQNLDNKYLSSVATVEKGDFLKIAMSDGELKALVYEVTT 499 >gi|315606060|ref|ZP_07881091.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon 180 str. F0310] gi|315312342|gb|EFU60428.1| exodeoxyribonuclease VII large subunit [Actinomyces sp. oral taxon 180 str. F0310] Length = 432 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 164/368 (44%), Gaps = 14/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHSR 63 ++ + + L+ ++K V+ +S + V G++ Y+ + + +L+D + Sbjct: 24 AADTTRENPWPLRRLTENIKVYVDR-MSPLWVEGQVVEYKVRPGARMHFLTLRDLQTDTS 82 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + W G ++ EG + K + S + + + G G LL +E Sbjct: 83 MTVTAWAGVMD--AAPLTEGARVVTRVKPVFWERSGRLNLQAAEIHLQGVGDLLAQIEAL 140 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 + +L EGLF+ K P+PF+P+ I +I D++ S R+P R I V VQ Sbjct: 141 RARLAAEGLFAQSRKKPLPFLPRTIGLICGRNAKAKDDVVVNASERWPHARFEIREVAVQ 200 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ C E+ A L E D+I++ARGGG++EDL F+DE +VRA A++ P Sbjct: 201 GERCVAEVGAA------LAELDGMNGVDVIVIARGGGAVEDLLPFSDERLVRAAASAHTP 254 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SAIGHE D L D AD RA TPT AA VP + + + R+ ++ + Sbjct: 255 IVSAIGHEGDSPLLDLVADYRASTPTDAARRVVPDEARERDGIAQAVGRMRGMLAARLAT 314 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L + L + L R L + + LE + + + + + + Sbjct: 315 ERSNLMLISSRPVLRGPEAILESHRTALSQHVVAMRSCLERRLGAERQGLTRLRATLTAL 374 Query: 361 FLIHNIQK 368 + + Sbjct: 375 SPRATLDR 382 Score = 93.7 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 43/141 (30%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R+ Q R + + + + T + + + Sbjct: 289 DEARERDGIAQAVGRMRGMLAARLATERSNLMLISSRPVLRGPEAILESHRTALSQHVVA 348 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + L ++ + ++ L + + + TL RGY ++ + IT + + I Sbjct: 349 MRSCLERRLGAERQGLTRLRATLTALSPRATLDRGYALLKTPSGALITSSQQVKKGDLIE 408 Query: 487 INFFDGQANAIVINKAPPKEQ 507 G+ A V+ P Sbjct: 409 GILASGRMVAQVVGATAPTPP 429 >gi|306822272|ref|ZP_07455653.1| exodeoxyribonuclease VII large subunit [Bifidobacterium dentium ATCC 27679] gi|304554434|gb|EFM42340.1| exodeoxyribonuclease VII large subunit [Bifidobacterium dentium ATCC 27679] Length = 430 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 102/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V V G+I+ + G AY +L+D++ Sbjct: 18 PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 75 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + +++I +G+G +L Sbjct: 76 DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 132 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176 +++ +KKL EGLF K P+P P I +I +P D++ + R+P+ + Sbjct: 133 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 192 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP ++ AI ++ P D+II+ARGGG+ EDL F+DE +VRA Sbjct: 193 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 246 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A + P+ISAIGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 247 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 306 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + ++ + L L + LD + L I+ Sbjct: 307 DATVANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 366 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 367 ASLTALSPQSTLNR 380 Score = 93.7 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 5/169 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399 ++ +++ +K + E+ Q H++++ + + E + Sbjct: 259 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATVANEMRLVE 318 Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + Q + + +R+ L+ + ++ + L + + ++TL Sbjct: 319 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 378 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 RGY IQ + + I N+ + + G + V + Q Sbjct: 379 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 427 >gi|171742359|ref|ZP_02918166.1| hypothetical protein BIFDEN_01470 [Bifidobacterium dentium ATCC 27678] gi|171277973|gb|EDT45634.1| hypothetical protein BIFDEN_01470 [Bifidobacterium dentium ATCC 27678] Length = 430 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 103/374 (27%), Positives = 165/374 (44%), Gaps = 19/374 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + VS LS VE V V G+I+ + G AY +L+D++ Sbjct: 18 PRLASETTADNPWPVSMLSEKFHMAVER-WPSVWVAGQITQINTRRA-GSAYLTLRDDYQ 75 Query: 63 RIDAII----WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLL 117 I + + G +G ++ GK + + + +++I +G+G +L Sbjct: 76 DI--AMEVNGF-GQFAAAATPFVQGDRVIIHGKPNLWMKRTSLSLRGDAIIAAGAGGSLK 132 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVII 176 +++ +KKL EGLF K P+P P I +I +P D++ + R+P+ + Sbjct: 133 AMIDELRKKLKGEGLFDIDRKMPLPEFPHCIGLICAPQARAEGDVITNVRLRWPVANFKV 192 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 V VQG++CP ++ AI ++ P D+II+ARGGG+ EDL F+DE +VRA Sbjct: 193 MHVHVQGEQCPSDVVAAIRAMDA------DPDVDVIIVARGGGAFEDLIGFSDEGVVRAA 246 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A + P+ISAIGHE DWTL D ADLRA TPT AA+ VP + R+ I Sbjct: 247 AAAQTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRI 306 Query: 297 IRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 I ++ + L L + LD + L I+ Sbjct: 307 DATIANEMRLVEGYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSR 366 Query: 355 NRIKSDFLIHNIQK 368 + + + + Sbjct: 367 ASLTALSPQSTLNR 380 Score = 93.7 bits (231), Expect = 6e-17, Method: Composition-based stats. Identities = 22/169 (13%), Positives = 57/169 (33%), Gaps = 5/169 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKI 399 ++ +++ +K + E+ Q H++++ + I E + Sbjct: 259 HEDDWTLLDLVADLRASTPTDAAKKVVPDVNEQTQLINVHLQRMRMRIDATIANEMRLVE 318 Query: 400 AILHM-LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + Q + + +R+ L+ + ++ + L + + ++TL Sbjct: 319 GYANRPSLTQPLTMLEPHQRFLDDARSRMRIGLTRILDDASLTIERSRASLTALSPQSTL 378 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 RGY IQ + + I N+ + + G + V + Q Sbjct: 379 NRGYAVIQSADGHVIDDANNVKPGDELTMTLKHGMVVSEVKTATTARSQ 427 >gi|148240529|ref|YP_001225916.1| exonuclease VII large subunit [Synechococcus sp. WH 7803] gi|147849068|emb|CAK24619.1| Exonuclease VII large subunit [Synechococcus sp. WH 7803] Length = 383 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 150/314 (47%), Gaps = 9/314 (2%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 N+ P YSV EL+ + ++E V G S R GH + +L D + I Sbjct: 2 NADSIPSYSVQELNASVGALLERGFAPRFLVHG--SALRPQIKKGHLWLTLSDGDASITV 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + W L ++ F+P EG V+GK+ + + + L PS T+ E K+ Sbjct: 60 VCWASRLKQLNFVPTEGEGVTVVGKLNFWSARASLAVQAIDLRPS-RSTIERRYEAVKEL 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L +EGL K +P +PK IA++TS + + D+L+ R+PL +++ P+ VQGD Sbjct: 119 LSQEGLIDPSRKRFLPPVPKRIALLTSVPSSALADMLRTAQERWPLTELLVIPIPVQGDV 178 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 PK + L E + + ++LARGGGS EDL F+DE + R +A+ +P+++ Sbjct: 179 APKICSVLE----RLAERVESLQVNAVVLARGGGSREDLMVFDDESLCRRLAHFPVPVVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+AD AD RA TPT A +P + L +L ++ + Sbjct: 235 GLGHEDDRTVADLVADFRAATPTAAIVSLLPTRTSALQFLSQCRQQLQQSQRWRLRREKE 294 Query: 306 TLNSLLKALPNSDQ 319 L L S+ Sbjct: 295 RLLQRRDTLRRSNP 308 Score = 69.0 bits (167), Expect = 2e-09, Method: Composition-based stats. Identities = 11/117 (9%), Positives = 43/117 (36%), Gaps = 6/117 (5%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + L+++ +++ + K R+ ++ + + Sbjct: 263 LLPTRTSALQFLSQCRQQLQQSQRWRLRREKERLLQRRDTLR------RSNPAAGVARRR 316 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 + ++LQ+ + + L RG+ ++ +++ + + ++I+ DG+ + Sbjct: 317 DRLEQRRQLLQALSPQRWLARGFATVSNSDGRLLQSVADARPSQPLIIHLSDGEIDV 373 >gi|227497816|ref|ZP_03928001.1| exodeoxyribonuclease VII [Actinomyces urogenitalis DSM 15434] gi|226832776|gb|EEH65159.1| exodeoxyribonuclease VII [Actinomyces urogenitalis DSM 15434] Length = 447 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 92/372 (24%), Positives = 169/372 (45%), Gaps = 18/372 (4%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRI- 64 + + + ++ LS + V + ++ V V ++ G ++ +L+D + I Sbjct: 30 ARETTADNPWPLALLSTKIDQYV-AKMTPVWVEAQVVQLNRRA--GMSFLTLRDLSAEIS 86 Query: 65 -DAIIWKGTL----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 A +++ L + +G+ +V G+ T + S +Q+ ++ + G+G LL Sbjct: 87 LRASMYRRDLVASEQAMGTELSDGMRVVVHGRPTFWTRSGSFQLQVDQIRLVGTGDLLAR 146 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E+ ++ L EGLF+ + K P+PF+P+++ ++ D++ R+P L + Sbjct: 147 IEQLRRVLAAEGLFAPERKRPLPFLPRVVGLVCGRDAKARDDVITNARLRWPGLPFEVRE 206 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG ++ AI +L+ P D+I++ARGGGS+EDL F+DE +VRA A Sbjct: 207 VAVQGVHAVSQVGAAIAELDAR------PEVDVIVVARGGGSVEDLLSFSDEGLVRAAAM 260 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 P++SAIGHETD L D AD RA TPT AA VP L +R+ + R Sbjct: 261 CRTPLVSAIGHETDRPLLDDVADYRASTPTDAARRIVPDLAEETVGLDQARSRIRTALAR 320 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + L+ + + + + + L + L L + R Sbjct: 321 RVTEEQTRLDRVRERPVMTDPTVIVRDKEADLSQGRERLRRALLTTLDLAGADLRAETAR 380 Query: 357 IKSDFLIHNIQK 368 + + + + Sbjct: 381 LTALSPQGVLDR 392 Score = 91.0 bits (224), Expect = 5e-16, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 2/143 (1%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + I + R + + + + + + R+ L Sbjct: 307 LDQARSRIRTAL--ARRVTEEQTRLDRVRERPVMTDPTVIVRDKEADLSQGRERLRRALL 364 Query: 433 HKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 + + T L + + + L RGY ++ +T L I G Sbjct: 365 TTLDLAGADLRAETARLTALSPQGVLDRGYAILRKPGVGVVTSSEELKKGDLIEGVLAHG 424 Query: 493 QANAIVINKAPPKEQPTKKCQLH 515 + A V+ P P+ Sbjct: 425 RMVAQVVGATKPSPTPSTAPAER 447 >gi|148270189|ref|YP_001244649.1| exodeoxyribonuclease VII, large subunit [Thermotoga petrophila RKU-1] gi|166232369|sp|A5ILK0|EX7L_THEP1 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|147735733|gb|ABQ47073.1| Exodeoxyribonuclease VII large subunit [Thermotoga petrophila RKU-1] Length = 394 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 94/361 (26%), Positives = 169/361 (46%), Gaps = 18/361 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 YSV+E++ ++K ++E + L++V V GEISG GH +FSL + ++R++ +I+ G Sbjct: 6 YSVTEINEYIKDLIEGDPYLTNVSVYGEISGV--RPRKGHIFFSLVEENARLECVIFGGD 63 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + +EG LV G ++ + Y+ I ++ + + K L E Sbjct: 64 N--MGIRLQEGRMALVEGSVSVYIPHGTYRFICSNVRYLDRVGMYQIKFETTLKKLLEEG 121 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191 + K +P P+ I +ITS A ++D+++ R P+ + +F VQGD +E+ Sbjct: 122 LLSRPKKTVPRFPRKIGIITSRDSAALQDVIRTARERKAPIEIYVFHTSVQGDSAREELI 181 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 A+ + N D++++ RGGGS EDLW FN+E ++R I P+++ IGHE Sbjct: 182 KALRKANE-------YDLDLVMIVRGGGSKEDLWVFNEEDVIREILKLRHPVVTGIGHEI 234 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +AD+ AD+ TPTGAAE +P + L + +L + + L +L Sbjct: 235 DRVIADFVADVSMHTPTGAAEYVIPDASEIHEDLDSFLEKLIASLSNRFDMEERRLETLY 294 Query: 312 KAL----PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + R+ L +L L + + ++S + ++ Sbjct: 295 FRLRMIGRRKLELNEFKIERVKELAAKLRKKLMDCFEQDQEKLESLGRMLESLNPLRPLE 354 Query: 368 K 368 + Sbjct: 355 R 355 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 44/130 (33%), Gaps = 1/130 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + L M+ + + +K+L ++ Sbjct: 266 EDLDSFLEKLIASLSNRFDMEERRLETLYFRLRMIGRRKLELNEFKIERVKELAAKLRKK 325 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 L + + R+L+S L+RG+ ++ + + +L + + F Sbjct: 326 LMDCFEQDQEKLESLGRMLESLNPLRPLERGFVLVK-KEGEIVKESSDLKRGDVVSLVFK 384 Query: 491 DGQANAIVIN 500 DG A VI Sbjct: 385 DGTKKAQVIG 394 >gi|332671419|ref|YP_004454427.1| exodeoxyribonuclease VII, large subunit [Cellulomonas fimi ATCC 484] gi|332340457|gb|AEE47040.1| exodeoxyribonuclease VII, large subunit [Cellulomonas fimi ATCC 484] Length = 415 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 155/372 (41%), Gaps = 16/372 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYF-SLKDNH 61 P + + V L+ + V + + V V G++ + ++ YF +L+D+ Sbjct: 13 PLRAAETTPERPWPVRHLAPKIADYV-ARMPPVWVEGQVLNLKRWNT---MYFLTLRDSD 68 Query: 62 --SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + + ++ +G +V + + G G LL Sbjct: 69 LDMSLSVTAPASAIRRLGDAAADGAHVVVHASPRFHAKKGDLTFQADDVRLVGLGELLAR 128 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFP 178 +E K L EGLF K P+PF+P ++ ++ + G D++ R+P +R I Sbjct: 129 IEHLKGVLAAEGLFDQGRKRPLPFLPAVVGLVCAQQGDAEHDVVSNARARWPGVRFEIRR 188 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 V VQG E++ AI L+ PR +++++ARGGGS EDL F++E +VRA A Sbjct: 189 VTVQGPRAVPEVSAAIADLDA------DPRVEVVVVARGGGSFEDLLPFSNETLVRAAAA 242 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 P++SAIGH D L D AD RA TPT AA+ VP ++ ++ L R ++ Sbjct: 243 CRTPLVSAIGHHMDTPLLDLVADFRASTPTDAAKRVVPDVTEERARVLQLRQRSRGALVH 302 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + L+ L N + R+ L L + + + Sbjct: 303 RLTREQAGLDHWRSRPALANPTTLVDTHEARVQVLRDAARRALHTELVHGRAEVAGLAAQ 362 Query: 357 IKSDFLIHNIQK 368 +++ + + Sbjct: 363 VRALSPAATLDR 374 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 53/160 (33%), Gaps = 5/160 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ ++ ++ + E++ + Q+ ++ + + A L Sbjct: 253 HHMDTPLLDLVADFRASTPTDAAKRVVPDVTEERARVLQLRQRSRGALVHRLTREQAGLD 312 Query: 404 MLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 R + + ++ L L ++ V+ +++ + TL Sbjct: 313 HWRSRPALANPTTLVDTHEARVQVLRDAARRALHTELVHGRAEVAGLAAQVRALSPAATL 372 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 RGY +Q + + + ++A + + G+ A V Sbjct: 373 DRGYAVVQRDDGHVVRDPADVAPGDALRVRVARGELAAQV 412 >gi|293189380|ref|ZP_06608103.1| exodeoxyribonuclease VII, large subunit [Actinomyces odontolyticus F0309] gi|292821843|gb|EFF80779.1| exodeoxyribonuclease VII, large subunit [Actinomyces odontolyticus F0309] Length = 442 Score = 203 bits (517), Expect = 5e-50, Method: Composition-based stats. Identities = 96/369 (26%), Positives = 164/369 (44%), Gaps = 14/369 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 ++ + + L+ ++K V+ +S + V G++ Y+ + + +L+D + Sbjct: 28 KAADTTRDNPWPLRRLTENIKVYVDR-MSPLWVEGQVVEYKVRPGAKMHFLTLRDLETDT 86 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + W G ++ EG + K + S + + + G G LL +E Sbjct: 87 SMTVTAWAGVMDS--TPLTEGARVVTRVKPVFWERSGRLNLQAAEIHLQGVGDLLAQIEA 144 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 + +L EGLFSD HK P+PF+P+ I +I D++ S R+P R I V V Sbjct: 145 LRARLAAEGLFSDAHKKPLPFLPRTIGLICGRNAKAKDDVVVNASDRWPSARFEIREVAV 204 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QGD C E+ A L E D+I++ARGGG++EDL F+DE +VRA+A++ Sbjct: 205 QGDHCVPEVGRA------LLELDAMDDVDVIVIARGGGAVEDLLPFSDERLVRAVADART 258 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 PI+SAIGHE D L D AD RA TPT AA VP + + R+ + + Sbjct: 259 PIVSAIGHEGDSPLLDLVADYRASTPTDAARRIVPDRAREHDGISQALTRMRGALGARLA 318 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L + L + + R L + + +E + + + + + Sbjct: 319 TERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTAMRSAIERRLASERQQLTRSRATLTA 378 Query: 360 DFLIHNIQK 368 + + Sbjct: 379 LSPQATLDR 387 Score = 96.4 bits (238), Expect = 1e-17, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 45/145 (31%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R+H Q R + + + + + + + +T Sbjct: 294 DRAREHDGISQALTRMRGALGARLATERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTA 353 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ S ++ + L + + + TL RGY ++ + IT + I Sbjct: 354 MRSAIERRLASERQQLTRSRATLTALSPQATLDRGYVLLKTPSGALITSSAQIKKGDLIE 413 Query: 487 INFFDGQANAIVINKAPPKEQPTKK 511 G+ A V+ P Sbjct: 414 GILASGRMVAQVVGATNPTPPADAP 438 >gi|154507707|ref|ZP_02043349.1| hypothetical protein ACTODO_00188 [Actinomyces odontolyticus ATCC 17982] gi|153797341|gb|EDN79761.1| hypothetical protein ACTODO_00188 [Actinomyces odontolyticus ATCC 17982] Length = 442 Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 14/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 ++ + + L+ ++K V+ +S + V G++ Y+ + + +L+D Sbjct: 27 AKAADTTRDNPWPLRRLTENIKVYVDR-MSPLWVEGQVVEYKVRPGAKMHFLTLRDLETD 85 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + W G ++ EG + K + S + + + G G LL +E Sbjct: 86 TSMTVTAWAGVMDS--TPLTEGAHVVTRVKPVFWERSGRLNLQAAEIHLQGVGDLLAQIE 143 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + +L EGLF+D K P+PF+P+ I +I D++ S R+P R I V Sbjct: 144 ALRARLAAEGLFADARKKPLPFLPRTIGLICGRNAKAKDDVVVNASDRWPSARFEIREVA 203 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQGD C E+ A+L E D+I++ARGGG++EDL F+DE +VRA+A++ Sbjct: 204 VQGDHCVPEVGRALL------ELDAMDDVDVIVIARGGGAVEDLLPFSDERLVRAVADAR 257 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 I+SAIGHE D L D AD RA TPT AA VP + + + R+ + + Sbjct: 258 TSIVSAIGHEGDSPLLDLVADYRASTPTDAARRIVPDRARERDGISQALTRMRGALGARL 317 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L + L + + R L + + +E + + + + Sbjct: 318 ATERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTAMRSAIERRLASERQQLTRSRATLT 377 Query: 359 SDFLIHNIQK 368 + + + Sbjct: 378 ALSPQATLDR 387 Score = 97.5 bits (241), Expect = 4e-18, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 44/145 (30%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R+ Q R + + + + + + + +T Sbjct: 294 DRARERDGISQALTRMRGALGARLATERSNLTLIASRPVLQGPEAIVEGHRVALTQRVTA 353 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + ++ S ++ + L + + + TL RGY ++ + IT + I Sbjct: 354 MRSAIERRLASERQQLTRSRATLTALSPQATLDRGYALLKTPSGALITSSAQIKKGDLIE 413 Query: 487 INFFDGQANAIVINKAPPKEQPTKK 511 G+ A V+ P Sbjct: 414 GILASGRMVAQVVGATNPTPPVDAP 438 >gi|213622891|ref|ZP_03375674.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 158 Score = 203 bits (515), Expect = 7e-50, Method: Composition-based stats. Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 1/157 (0%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K KL Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKL 121 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ 164 EGLF QHK P+P + VITS TGA + DIL Sbjct: 122 HAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILH 158 >gi|255994611|ref|ZP_05427746.1| exodeoxyribonuclease VII, large subunit [Eubacterium saphenum ATCC 49989] gi|255993324|gb|EEU03413.1| exodeoxyribonuclease VII, large subunit [Eubacterium saphenum ATCC 49989] Length = 398 Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats. Identities = 99/363 (27%), Positives = 170/363 (46%), Gaps = 15/363 (4%) Query: 14 EYSVSELSYHLKHIVESNLSHVC---VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 +V+ L ++K + +L + V+G+IS ++ +A+FSLKD + ID + + Sbjct: 3 PLTVTHLVEYIKDKFKKDL-FLWEISVKGQISNFKYDPRKNYAFFSLKDIGASIDCVYFD 61 Query: 71 -GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 ++ E+ E + G++ + + + Q+ +E L G LE ++KL Sbjct: 62 VHDIDSNALDVED-EEVEITGRLDVYQKTGRMQLYVERLKRCGESEKAKQLEMLRQKLEG 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 EGLF + K IP I +IT A DI + I + P + +I VQGDE Sbjct: 121 EGLFDKEKKRHIPLYATKIGIITGKDSAAQADIKKVIEKKNPYINTVIEEAYVQGDEAIT 180 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 I A + E P+II+LARGGG+ DL FN E + R + S+IP+++ +G Sbjct: 181 SICRAFDVFEGMDE-----PPEIIVLARGGGAKTDLDAFNTEEVARRVFASNIPVVTGVG 235 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D TLAD AAD R TPT AA+ A + L + L+ + RL +++ R + N L Sbjct: 236 HEIDVTLADMAADQRESTPTAAADRAAFDWDQLSAELLGIHLRLKSVLERKTETCGNRLL 295 Query: 309 SLLKALP---NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + N +S ++ L ++++ + + ++++ + N Sbjct: 296 QKFLNIEKKANIGMRISKMENTVEALWGVANASMQMKLTNLKNEIAKMNQSLENNDISKN 355 Query: 366 IQK 368 + K Sbjct: 356 LAK 358 Score = 66.3 bits (160), Expect = 1e-08, Method: Composition-based stats. Identities = 15/162 (9%), Positives = 42/162 (25%), Gaps = 7/162 (4%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----QIVKQHLRYIFLEKKEKI 399 + + + + + ++ R + Sbjct: 236 HEIDVTLADMAADQRESTPTAAADRAAFDWDQLSAELLGIHLRLKSVLERKTETCGNRLL 295 Query: 400 AILHML--REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + RI + ++ L + K+ + ++ + L++ Sbjct: 296 QKFLNIEKKANIGMRISKMENTVEALWGVANASMQMKLTNLKNEIAKMNQSLENNDISKN 355 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 L +GY N IT L + + DG+ + + Sbjct: 356 LAKGYALPL-VNGKVITTAAELRRQESFELLMKDGKVDCEIT 396 >gi|260910064|ref|ZP_05916746.1| exodeoxyribonuclease VII [Prevotella sp. oral taxon 472 str. F0295] gi|260635832|gb|EEX53840.1| exodeoxyribonuclease VII [Prevotella sp. oral taxon 472 str. F0295] Length = 450 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 79/504 (15%), Positives = 167/504 (33%), Gaps = 98/504 (19%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 ++ EL+ ++ + + V EIS R + GH Y L KD ++ A Sbjct: 24 LTLYELNQMVRESLAITMPDEYWVEAEISEMREVR--GHCYMELVQKDVTGNTPVAKASA 81 Query: 67 IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 WK + G++ ++ + I+ + P+ G + Sbjct: 82 KCWKNKWGLLRPHFERNAGQTLRAGLKVRLLVYADFHEAYG-FSWIVADIDPTYTLGDMA 140 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + + L ++G+F Q + +P + +AVI+S A D + + V Sbjct: 141 RKRLEIVRMLKQQGVFDLQKELRLPLFTQRVAVISSEQAAGYGDFYRHLHENDWHLHFSV 200 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +F +QG+ + + A+ +N D++++ RGGG+ DL F+ + Sbjct: 201 QLFTATMQGEGVERSVIAALDAINERLTD-----FDVVVIIRGGGATSDLSGFDSLPLAE 255 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PII+ IGH+ D ++ D + R TPT AA + V Sbjct: 256 NVANFPLPIITGIGHDRDESVLDMVSFRRVKTPTAAAALLVEH----------------- 298 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 L+ + R+ E+ H L+ + + + Sbjct: 299 --------------------------LAETYQRVTDAQEEMVHLLQRRMELERIRLARLA 332 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 ++ F + ++ K + +R + Sbjct: 333 EKVPMLFSLVRTRQE--------------------------KRFENMALRMRNAMATTLQ 366 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 +++L + + + + + ++S L +GY+ + Sbjct: 367 RQDLRLQRLTLALPTQAERLLTKASHRLELLEQTIKSHDPALLLSKGYSITTL-GGKVVR 425 Query: 475 QKRNLATKTRILINFFDGQANAIV 498 +L I+ G+ ++V Sbjct: 426 NANDLQKGDVIVTQLQKGKVKSVV 449 >gi|184200356|ref|YP_001854563.1| exodeoxyribonuclease VII large subunit [Kocuria rhizophila DC2201] gi|183580586|dbj|BAG29057.1| exodeoxyribonuclease VII large subunit [Kocuria rhizophila DC2201] Length = 437 Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats. Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 14/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P +++ + +S+LS+ L V+ V G++ Y +L+D Sbjct: 27 PRLARDTSPENPWPLSKLSHALHGWVQKA-PDAWVEGQVIEVNERARV--CYVTLRDLQE 83 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + ++K + ++E E G +V + + + + ++ + P G G LL L Sbjct: 84 EASVSVTLFKKEMARLERPLERGSRVVVNLQADFYVKTGRLSMLGRDIRPVGLGDLLERL 143 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L +EGLF K P+P +P + +IT +D+++ + R+P ++ I V Sbjct: 144 ERLRRALADEGLFDPARKKPLPVLPHRVGLITGRNSDAEKDVVRNATNRWPGVQFEIREV 203 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + + A+ +L+ + E D+I++ARGGG+ EDL F++E ++RA+ + Sbjct: 204 PVQGSGSARAVIGALEELDAMAE------VDVIVIARGGGAFEDLLSFSEESLLRAVFAA 257 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D L D+ AD+RA TPT A + VP + L A L+ + L Sbjct: 258 RTPVVSAIGHENDQPLLDHVADVRASTPTDAGKRVVPDVHEERLRLGQARAALDRAVGSL 317 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 I+ + L ++ L D + LDR + R + R+ Sbjct: 318 IEREQQGLATVRSRPVLSQPDGMILVREEDLDRWRTRAWTATNSLTLRAQDSVAQMRARV 377 Query: 358 KSDFLIHNIQK 368 ++ + + Sbjct: 378 RALSPQQTLDR 388 Score = 93.7 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 47/141 (33%), Gaps = 2/141 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + R + + + +++ V + + Q I + + T Sbjct: 296 VHEERLRLGQARAALDRAVGSLIEREQQGLA--TVRSRPVLSQPDGMILVREEDLDRWRT 353 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R + SV+ +++ + + TL RGY +Q T+ + +T ++ Sbjct: 354 RAWTATNSLTLRAQDSVAQMRARVRALSPQQTLDRGYAVVQTTDGSVLTDASRAQVGQQL 413 Query: 486 LINFFDGQANAIVINKAPPKE 506 + G+ V + + Sbjct: 414 TVRLAAGELGVDVTGTSTRQP 434 >gi|33866713|ref|NP_898272.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. WH 8102] gi|81835051|sp|Q7U490|EX7L_SYNPX RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|33633491|emb|CAE08696.1| possible exodeoxyribonuclease VII large subunit [Synechococcus sp. WH 8102] Length = 387 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 92/306 (30%), Positives = 154/306 (50%), Gaps = 9/306 (2%) Query: 12 HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P +SV+EL+ + +++E V +S R GH + +L D + I A+ W Sbjct: 6 IPSFSVAELNTAIGNLLERGFAPRFLVEATVS--RPQLKKGHLWLTLTDGEASISAVAWA 63 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 L ++ + PE+G V+GK+ + + + + + PS T+L E +++L E Sbjct: 64 SQLRQLRYRPEDGDGVTVVGKLNFWAARASLNVQVLDIRPS-LSTVLRQFELVRRRLEEA 122 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189 GL + P+P P+ +AV+TS + + D+L+ S R+P+ R+++ P+ VQG + Sbjct: 123 GLLDITRRRPLPRQPRTLAVLTSVPSSALADMLRTASERWPMTRLLVVPIPVQGSVAARI 182 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 L L E + D ++LARGGGS EDL F+DE + R +A +P+++ +GH Sbjct: 183 R----EVLGRLAEEASALGLDALVLARGGGSREDLAVFDDEDLCRDLAAFPVPVVTGLGH 238 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD AD RA TPT A +P + L RL + R ++ + L Sbjct: 239 EDDLTVADLVADHRAATPTAAIVALLPDRHVALRELQQQRQRLRELRSRWLERQHQRLLD 298 Query: 310 LLKALP 315 +AL Sbjct: 299 RRQALA 304 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 42/125 (33%), Gaps = 16/125 (12%) Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--------------- 446 L R + +++L +R ++ ++++ T Sbjct: 263 LLPDRHVALRELQQQRQRLRELRSRWLERQHQRLLDRRQALALLTPQRRLQQLRQQLEQR 322 Query: 447 -RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 +L++ + + LK+G + + I + + K + ++F DG +V P Sbjct: 323 RALLRALSPQRWLKQGLALVSNGQGMTIDGVKGVRKKDTLTLSFHDGSIETVVTQVRPQN 382 Query: 506 EQPTK 510 T Sbjct: 383 SSSTP 387 >gi|296393508|ref|YP_003658392.1| exodeoxyribonuclease VII large subunit [Segniliparus rotundus DSM 44985] gi|296180655|gb|ADG97561.1| exodeoxyribonuclease VII, large subunit [Segniliparus rotundus DSM 44985] Length = 416 Score = 201 bits (512), Expect = 2e-49, Method: Composition-based stats. Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 13/369 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 + + + V ++ + ++ L V + G+I+ H + A+ +L+D ++ Sbjct: 13 EAAANGEDNPWPVKTVAMKIAGWIDR-LGAVWITGQIAELSARHGARAAFVTLRDTAENA 71 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + + G L +EG E +V GK++ + I +++ G G LL +E+ Sbjct: 72 SLQIMCPMGLLKG-NPEIKEGAEVVVHGKLSFYTARGTLAIWADTIRAVGVGELLARIER 130 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 +K+ EGL + K P+PF+P + +IT A +D+L R+P +R + V V Sbjct: 131 LRKQFAAEGLSDPRRKRPLPFLPGGVGLITGRASAAQQDVLSIAKARWPQVRFHLREVAV 190 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG + + A LKE + ++I+LARGGGS+EDL F++E + RA+A + Sbjct: 191 QGPGSAQAVIAA------LKELQASSEVEVIVLARGGGSVEDLLTFSEESLCRAVAACPV 244 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHETD L+D AD+RA TPT AA+ VP +S L + R + ++ Sbjct: 245 PVVSAIGHETDRPLSDDVADVRAATPTDAAKRVVPDVAVERSRLHEMRGRSAAALRGWVE 304 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + SL L + L L L +++ I + R+ + Sbjct: 305 REQARIASLAARPALSDPHAMLRARAEGLRGARDTLRRSVQRQIEHERHAVAASAARLAA 364 Query: 360 DFLIHNIQK 368 + + Sbjct: 365 LGPAATLAR 373 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 2/135 (1%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R + E + ++ + A + ++ + Sbjct: 284 ERSRLHEMRGRSAAALRGWVEREQARIASLAAR--PALSDPHAMLRARAEGLRGARDTLR 341 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + +I+ +V+ + L + TL RGY +Q + + R+ I Sbjct: 342 RSVQRQIEHERHAVAASAARLAALGPAATLARGYALVQGADGELVRDPAQTKPGDRLRIR 401 Query: 489 FFDGQANAIVINKAP 503 DG A+ + P Sbjct: 402 LADGLLGAMTTKEIP 416 >gi|258654509|ref|YP_003203665.1| exodeoxyribonuclease VII large subunit [Nakamurella multipartita DSM 44233] gi|258557734|gb|ACV80676.1| exodeoxyribonuclease VII, large subunit [Nakamurella multipartita DSM 44233] Length = 432 Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 160/371 (43%), Gaps = 12/371 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + V L+ + V V G+++ S ++ +L+D Sbjct: 24 PTKAAETSRENPWPVRALAQRMTEYVARA-PAAWVEGQLAQVTMRGGSQASFLTLRDPSV 82 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + + L + P EG +V G+ +P ++ + P G G LL L Sbjct: 83 PMSLQVVCSRALLMSMNPPPSEGSRVVVHGRFEFYPARGTLSFKVDQMHPVGIGELLARL 142 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L EGL + K P+PF+P ++ +IT A D+L R+P +R + Sbjct: 143 ERLRRLLAAEGLTDPRRKRPLPFLPTVVGLITGRASAAESDVLANARARWPAVRFRVENP 202 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG +I ++ +L+ P D+I+LARGGGS+EDL F+DE + RA++ Sbjct: 203 AVQGVSAVTQIIESLARLDA------DPEVDVIVLARGGGSMEDLLPFSDEALCRAVSGC 256 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P+I+AIGHE D + D AD+R TPT A + VP + + +AR + Sbjct: 257 RTPVIAAIGHEPDHPIVDDVADVRCSTPTDAGKRVVPDALAERRQVEQWQARARRALTGW 316 Query: 300 IKYKINTLNS--LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + L+ L + L + ++R +L+ + R R H ++ Sbjct: 317 VSTEQARLHRLTSASVLADPFSPLDRRQREVERDRDRGRASLDRTLERMERDIAHRRAQL 376 Query: 358 KSDFLIHNIQK 368 + + Sbjct: 377 AVLGPAATLAR 387 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 39/138 (28%), Gaps = 3/138 (2%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ + + Q + + + + + + + +++ R Sbjct: 298 ERRQVEQWQARARRALTGWVSTEQARLHRLTSAS--VLADPFSPLDRRQREVERDRDRGR 355 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 L ++ ++ L TL RGY +Q + + + I Sbjct: 356 ASLDRTLERMERDIAHRRAQLAVLGPAATLARGYAVVQSA-GAVLRSVADAPAGADLRIR 414 Query: 489 FFDGQANAIVINKAPPKE 506 DG A+ P E Sbjct: 415 VVDGAVLAVSTGPEPASE 432 >gi|118586759|ref|ZP_01544196.1| exodeoxyribonuclease VII, large subunit [Oenococcus oeni ATCC BAA-1163] gi|118432847|gb|EAV39576.1| exodeoxyribonuclease VII, large subunit [Oenococcus oeni ATCC BAA-1163] Length = 406 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 124/404 (30%), Positives = 199/404 (49%), Gaps = 16/404 (3%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-SRIDAIIWKG 71 +V L+ +L + L V + GEI GY+ SSG AYF L+D S I A + Sbjct: 11 LTVGTLNRYLSAKFVHDPYLKQVSLTGEIFGYKI--SSGSAYFDLRDEDESSIRAYVSPT 68 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L F + G + ++ + + + + I S+ P+G G L L + K KL +EG Sbjct: 69 ILRSFPFDFKSGDKVNLVADVRLYGKRAYASLFIFSMQPAGLGELYLKLAELKNKLTKEG 128 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ + + PK IAVITS TGAVI DI I R P L++ +F VQGD KE+ Sbjct: 129 IFNR-PTKELNYFPKKIAVITSKTGAVIHDISSTIGHRNPNLKIELFESSVQGDSAVKEL 187 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +A+ + + D II+ARGGGS+ DLW FNDE +VR +++ S P+IS+IGHE Sbjct: 188 VSAVKKADQS-------DADAIIIARGGGSMLDLWPFNDEQLVRLLSSLSKPVISSIGHE 240 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TL D AAD R TPT AA P +++L L A ++ I +L++ +N L Sbjct: 241 TDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLTALMSVDIKQLLQKNLNRFEYL 300 Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + DQ +L L L ++ + + F ++ ++ + + + + Sbjct: 301 ANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNIQQFANLTAKLDALSPLKVLDR 360 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 ++ + I+ + + K + L ++E + +R Sbjct: 361 GFSLTFKEDRLIKNAQQLKEKDRIKILFAKGSALAEIKEISDDR 404 Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 57/187 (30%), Gaps = 6/187 (3%) Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 + L + + I + + + K IL+ + +++Q+ Sbjct: 220 EQLVRLLSSLSKPVISSIGHETDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLT 279 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCH 439 I ++ + L F ++ L R+ + + + Sbjct: 280 ALMSVDIKQLLQKNLNRFEYLANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNI 339 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + T L + + L RG++ + I + L K RI I F G A A + Sbjct: 340 QQFANLTAKLDALSPLKVLDRGFSLTFKED-RLIKNAQQLKEKDRIKILFAKGSALAEIK 398 Query: 500 NKAPPKE 506 + + Sbjct: 399 EISDDRR 405 >gi|159036479|ref|YP_001535732.1| exodeoxyribonuclease VII, large subunit [Salinispora arenicola CNS-205] gi|157915314|gb|ABV96741.1| exodeoxyribonuclease VII, large subunit [Salinispora arenicola CNS-205] Length = 400 Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats. Identities = 100/418 (23%), Positives = 171/418 (40%), Gaps = 22/418 (5%) Query: 20 LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--AIIWKGTLNKIE 77 +S + + + L V V G+++ + + +L+D + + + L+ Sbjct: 2 VSQKISAWI-ARLGWVWVDGQVAQVSRRPGASTVFLTLRDPSADLSLTVTTNRDVLDSGA 60 Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137 EG ++ K + + + + G G LL LEK KK L EGLF + Sbjct: 61 PQLREGARVVLHAKPDFYAARGTLSLRADEIRQVGLGELLARLEKLKKLLGAEGLFDPRR 120 Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196 K +PF+P I +IT A RD+ R+P + V VQG +I +A+ Sbjct: 121 KQRLPFLPHQIGLITGRASAAERDVRTNARRRWPAVTFRTVNVAVQGPSAVPQIVDALRV 180 Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256 L+ P ++I++ARGGG IEDL F+DE + RA+ P++SAIGHETD L Sbjct: 181 LDA------DPTTEVIVIARGGGGIEDLLPFSDEALCRAVFACRTPVVSAIGHETDAPLL 234 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 DY AD+RA TPT AA+ VP + +RL+ + L+ + + L L Sbjct: 235 DYVADVRASTPTDAAKRIVPDLAEEVRVIGQARSRLDRAVRNLVDREAHRLE-----LLR 289 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 S L+ + ++RL ++ L + R + + + + ++R L Sbjct: 290 SRPVLARPQLMVERLATDVS-ALRHRVDRC------LAHTLTAAADDLRHTRDRLRALSP 342 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 +++ R + + + + L I R + Sbjct: 343 AATLDRGYAIVQRTDGHVVRAASEVAEGDPVRVRLADGELAATIDAGDRRQASPARRR 400 Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 61/147 (41%), Gaps = 2/147 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + I + + +++ V+ + + ++ + + + + L T + L Sbjct: 256 LAEEVRVIGQARSRLDRAVRNLVDREAH--RLELLRSRPVLARPQLMVERLATDVSALRH 313 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R++ L+H + + + T L++ + TL RGY +Q T+ + + +A + Sbjct: 314 RVDRCLAHTLTAAADDLRHTRDRLRALSPAATLDRGYAIVQRTDGHVVRAASEVAEGDPV 373 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKC 512 + DG+ A + + P ++ Sbjct: 374 RVRLADGELAATIDAGDRRQASPARRR 400 >gi|145640355|ref|ZP_01795939.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae R3021] gi|145274941|gb|EDK14803.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 22.4-21] Length = 162 Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 90/159 (56%), Gaps = 1/159 (0%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 N++ YSVS+L+ + ++E + S + + GEIS + SGH Y +LKD ++++ Sbjct: 2 NNMSDNIYSVSQLNSAARQMLEGHFSQIWLTGEISNFT-QPVSGHWYLTLKDKNAQVRCA 60 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 +++ ++ F P+ G++ LV ++ + YQ+II+S+ P+G G L E K KL Sbjct: 61 MFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHPAGEGLLQQQFEALKMKL 120 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166 EGLF+ K +P K + +ITS TGA ++DIL Sbjct: 121 ATEGLFAQNLKKNLPHFSKAVGIITSSTGAALQDILHIF 159 >gi|255524172|ref|ZP_05391132.1| Exodeoxyribonuclease VII [Clostridium carboxidivorans P7] gi|255512157|gb|EET88437.1| Exodeoxyribonuclease VII [Clostridium carboxidivorans P7] Length = 179 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 61/163 (37%), Positives = 99/163 (60%), Gaps = 3/163 (1%) Query: 15 YSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 +VSEL+ ++K +V+++ + V+GEIS ++ +HSSGH YFS+KD +S+I+ ++++ + Sbjct: 6 LTVSELNGYIKKLVDNDFILGNSNVKGEISNFK-LHSSGHIYFSIKDEYSKINCVMFRSS 64 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 ++F+PE G++ +V G+++ + YQI + G G L A EK K KL +GL Sbjct: 65 ARNLKFMPENGMKVVVKGRVSVYEKDGAYQIYCNDIELDGVGELYMAFEKLKSKLQSQGL 124 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI 175 F HK IP + I V+TSPTGA +RDI+ R V Sbjct: 125 FEVTHKKEIPPYARKIGVVTSPTGAAVRDIINVAKRRNDAVVT 167 >gi|116671381|ref|YP_832314.1| exodeoxyribonuclease VII large subunit [Arthrobacter sp. FB24] gi|116611490|gb|ABK04214.1| Exodeoxyribonuclease VII large subunit [Arthrobacter sp. FB24] Length = 428 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 14/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID--A 66 + + + LS LK ++ V G++ S A+ +L+D + I A Sbjct: 18 TSPDNPWPLQLLSQKLKAHIDRT-PSAWVEGQVIELNRRGGS--AFMTLRDVDAEISLPA 74 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 IW L++ + E G + + K + + + + ++ + P G G LL +E+ + Sbjct: 75 SIWSNVLDRQDVPLERGSRVVALLKAEFWLKTGRLNMSVKDIRPLGLGDLLARIERLRHA 134 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGLF+D K +P +P I +IT +D+L+ + R+P + I V VQG+ Sbjct: 135 LSMEGLFADSRKKRLPLLPHRIGLITGRDSDAKKDVLRNAALRWPAVEFEIREVAVQGNT 194 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 +I A+ L+ D+I++ARGGG++EDL F++E ++RA++N+S P++S Sbjct: 195 AVSQIMGALRDLDADAH------VDVIVIARGGGALEDLLPFSNEDLIRAVSNASTPVVS 248 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHE D + D ADLRA TPT AA+ VP + +L + RL++ + + Sbjct: 249 AIGHEADRPILDDVADLRASTPTDAAKRIVPDVVEELDRVRQARDQLRRGVHRLVERESD 308 Query: 306 TLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L + +S + RL + + R H+ ++++S Sbjct: 309 RLASLHSRPVLAAPEVMVSARAEDVARLSSRSRAAISTAVLRGADQILHLRSQVRSLSPQ 368 Query: 364 HNIQK 368 + + Sbjct: 369 QTLDR 373 Score = 70.2 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 45/141 (31%), Gaps = 9/141 (6%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHMLREQTKNRIFYLHTHIKKLITRIEF 429 + + +Q +Q+ + R + E ++ + + + + +L +R Sbjct: 283 EELDRVRQARDQLRRGVHRLVERESDRLASLHSRPVLAAPEVMVSARAEDVARLSSRSRA 342 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--------DTNNNFITQKRNLAT 481 +S + + ++S + + TL RGY +Q D + Sbjct: 343 AISTAVLRGADQILHLRSQVRSLSPQQTLDRGYAVVQVSGTARAEDEPLAVVRHPSQAPE 402 Query: 482 KTRILINFFDGQANAIVINKA 502 + + + G +A Sbjct: 403 GSDLFVRVAGGSFSARSTGGQ 423 >gi|312194580|ref|YP_004014641.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EuI1c] gi|311225916|gb|ADP78771.1| exodeoxyribonuclease VII, large subunit [Frankia sp. EuI1c] Length = 424 Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats. Identities = 97/366 (26%), Positives = 168/366 (45%), Gaps = 12/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RID 65 S V +S L + + L + V G+++ A+ +L+D + + Sbjct: 2 TSTPEEPLPVRTVSRALGDWI-NRLGRIWVEGQVTEISRRPGMSTAFLTLRDPVADVSLR 60 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + L+ + +G +V GK + PG + + + P G G LL LE ++ Sbjct: 61 LTCPRTVLDAVGPALTDGARVVVWGKPSFHPGRGTLALQVFEIRPVGVGALLARLEALRQ 120 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF+ K PF+P + +IT A RD+++ R+P +R++ V VQG Sbjct: 121 LLAAEGLFAASRKRRPPFLPGAVGLITGRASAAERDVVENARRRWPAVRIVTREVAVQGP 180 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 ++ +A+ +L+ +E ++I++ARGGGS+EDL F+DE ++RA+A + P++ Sbjct: 181 LAAGQVIDALRELDADRE------VEVIVIARGGGSLEDLLPFSDEALLRAVAAARTPVV 234 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D L DY AD+RA TPT AA+ VP + + L R ++ + + Sbjct: 235 SAIGHEQDSPLLDYVADVRASTPTDAAKKVVPDVGEQAALVAQLRGRARRVVEHRLDRES 294 Query: 305 N--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 T AL + L ++ L R + + R H R+++ Sbjct: 295 RALTDLRGRPALAAPLRDLDRRSEAVEALTRRAFRCVTHAVDVAGRDVAHAAARLRALSP 354 Query: 363 IHNIQK 368 + + Sbjct: 355 AATLDR 360 Score = 80.6 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 1/154 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q L Q R + + ++ L R Sbjct: 271 QAALVAQLRGRARRVVEHRLDRESRALTDLRGRPALAAPLRDLDRRSEAVEALTRRAFRC 330 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINF 489 ++H + V+ L++ + TL RGY +QD ++ I +L + + Sbjct: 331 VTHAVDVAGRDVAHAAARLRALSPAATLDRGYALVQDGSSGAIIRDPVDLTAHQTLQVRV 390 Query: 490 FDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG 523 G A V + P + P QL + Sbjct: 391 ARGSFAATVADPLPSQPPPDAASQLTAPSSGRPS 424 >gi|87125239|ref|ZP_01081085.1| Exonuclease VII, large subunit [Synechococcus sp. RS9917] gi|86167008|gb|EAQ68269.1| Exonuclease VII, large subunit [Synechococcus sp. RS9917] Length = 385 Score = 199 bits (507), Expect = 6e-49, Method: Composition-based stats. Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 13/350 (3%) Query: 9 SLDHPE-YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 S D P Y+V EL+ + ++E V +S R GH + +L D + I A Sbjct: 2 SADAPPTYTVQELNSSIGSLLERGFAPRFLVDATVS--RPQVKKGHLWMTLTDGDASISA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + W L ++ ++P +G V+GK+ + + + + + PS T+ E + + Sbjct: 60 VAWASKLRQLAYVPGDGEGVRVVGKLNFWATRASLAVQVLDIRPS-LSTVQRRFEAVRAQ 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L +EG+ + P+P P IA++TS + + D+L+ R+PL V++ + VQG+ Sbjct: 119 LEQEGVIDPARRRPLPAYPSRIALLTSVPSSALADMLRTARERWPLAEVLVLAIPVQGEV 178 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 + L L + I+LARGGGS EDL F+D+ + R +A S +P+++ Sbjct: 179 AGRIR----EVLTRLYAASSRLGIKAIVLARGGGSREDLMVFDDDALCRLLAQSPVPLVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D T+AD AD RA TPT A +P + + + R + ++ + Sbjct: 235 GIGHEDDLTVADLVADHRAATPTAAIVRLLPCRSQALEDVTLRQRRWRDQRHWVLLRERQ 294 Query: 306 TLNSLLKALPNSDQTLSCSRYR---LDRLPRELEHNLEIIIFRKYRHFNH 352 L + + R R RL + R + Sbjct: 295 QLEHRQQQWLQHHPRIVLQRRRDRLEQRLQLLAALAPSRWLARGFAMLER 344 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 11/130 (8%), Positives = 40/130 (30%), Gaps = 6/130 (4%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + Q L + L ++ H + + + ++ + ++ ++ Sbjct: 262 RLLPCRSQALEDVTLRQRRWRDQRHWVLLRERQQLEHRQQQW------LQHHPRIVLQRR 315 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 + ++L + A L RG+ ++ + + + +++ DG+ + Sbjct: 316 RDRLEQRLQLLAALAPSRWLARGFAMLERPSGEVLRSVHEVEPGESLIVRLNDGRVDVQA 375 Query: 499 INKAPPKEQP 508 Sbjct: 376 TAIHASDRSA 385 >gi|118462521|ref|YP_880474.1| exodeoxyribonuclease VII large subunit [Mycobacterium avium 104] gi|118163808|gb|ABK64705.1| exodeoxyribonuclease VII, large subunit [Mycobacterium avium 104] Length = 379 Score = 199 bits (507), Expect = 7e-49, Method: Composition-based stats. Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 11/336 (3%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTF 95 G+++ S + L+D + + + + EG + +V GK + + Sbjct: 2 EGQLAQVSLRPDSKTVFMVLRDPAADMSLTVTCPRDLVLNAPVKLAEGTQVVVCGKPSFY 61 Query: 96 PGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155 G + + + + G G LL +E+ ++ L EGLF + K PIPF+P +I +IT Sbjct: 62 TGRGTFSLRLSEIRAVGVGELLARIERLRRLLDAEGLFDPRLKRPIPFLPNMIGLITGRA 121 Query: 156 GAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL 214 A RD+ + R+P +R + VQG +I A L+E P D+I+L Sbjct: 122 SAAERDVKTVAAGRWPAVRFAVRNTAVQGPNAVAQIVEA------LRELDRDPEVDVIVL 175 Query: 215 ARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMA 274 ARGGGS+EDL F+DE + RAIA P+ISA+GHE D L D AD+RA TPT AA+ Sbjct: 176 ARGGGSVEDLLPFSDETLCRAIAACRTPVISAVGHEPDNPLCDLVADVRAATPTDAAKKV 235 Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLP 332 VP Q + +L R + + + L + L + L+ + R Sbjct: 236 VPDTAAEQRLIDDLRRRSAQALRNWVSREQRALAQIRSRPVLAEPLRALTARAEEVHRAR 295 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ + + H+ R+ + + + Sbjct: 296 SAIRRDVTRLTAAETERIGHLRARLATLGPAATLAR 331 Score = 76.7 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 6/133 (4%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R +++ + + R + + + + + + + + Sbjct: 241 AEQRLIDDLRRRSAQALRNWVSREQRALAQIR---SRPVLAEPLRALTARAEEVHRARSA 297 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD--TNN-NFITQKRNLATKT 483 I ++ + + L + TL RGY +Q + + + T Sbjct: 298 IRRDVTRLTAAETERIGHLRARLATLGPAATLARGYAVVQTVGAGGPHVLRTVGDAPAGT 357 Query: 484 RILINFFDGQANA 496 R+ + DG A Sbjct: 358 RLRVRVADGAVAA 370 >gi|256818732|ref|YP_003135799.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 8802] gi|256592472|gb|ACV03342.1| exodeoxyribonuclease VII, large subunit [Cyanothece sp. PCC 8802] Length = 384 Score = 199 bits (507), Expect = 7e-49, Method: Composition-based stats. Identities = 109/315 (34%), Positives = 174/315 (55%), Gaps = 16/315 (5%) Query: 10 LDHPE---YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNH--S 62 +++P SV+ ++ +L+ ++E + L+ + V GE+S + H G +F+L D+ + Sbjct: 1 MNNPPETALSVAGVTEYLQLLLEDDAQLNQLWVTGEVSSLQD-HRVG-LFFTLSDSQGQA 58 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 I ++W G K+ P+ G + V G + +P +YQ+ + I +G G ++ Sbjct: 59 AIKCVVWNGQKGKLLHCPKLGSQIFVNGSVRLYPKKGEYQLTVFQAIETGDGLQTLRYQQ 118 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 + +L EGLF + K +P P+ IAV+++ T A DI + + R P L V++ P V Sbjct: 119 LRSRLQAEGLFDLERKRSLPPYPQTIAVVSALTAAAWGDIQRTLVQRNPGLHVLLSPATV 178 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG E P I AI ++ R +++ILARGGG++EDL+ FNDE +VRAI+ S I Sbjct: 179 QGTEAPSSIERAIRRVAA------DGRAEVLILARGGGAVEDLFCFNDERVVRAISESPI 232 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P+I+ IGH+ D TLAD AD A TPT AAEMAVP L + + + RL + R ++ Sbjct: 233 PVITGIGHQRDETLADLVADATAHTPTAAAEMAVPSYSALLAEHQHRQGRLLVSLERRLR 292 Query: 302 YKINTLNSLLKALPN 316 + + L L L N Sbjct: 293 QESDRLGRLKTRLKN 307 Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 2/112 (1%) Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSF 452 E L + R+ + +L TR++ + ++ + + + LQ+ Sbjct: 273 LAEHQHRQGRLLVSLERRLRQESDRLGRLKTRLKNLPASAASVRGATVKIHLLQQKLQAL 332 Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 LKRG++ ++ + + L+ ++I G V P Sbjct: 333 DPNAVLKRGFSLVRTNDGEIVRDSVQLSEDLELVIQLPQGSIKVKVTEILPE 384 >gi|282859479|ref|ZP_06268584.1| exodeoxyribonuclease VII, large subunit [Prevotella bivia JCVIHMP010] gi|282587707|gb|EFB92907.1| exodeoxyribonuclease VII, large subunit [Prevotella bivia JCVIHMP010] Length = 433 Score = 199 bits (507), Expect = 7e-49, Method: Composition-based stats. Identities = 88/510 (17%), Positives = 191/510 (37%), Gaps = 98/510 (19%) Query: 10 LDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61 ++ S+ +L+ + ++ + + E+S GH Y F KD Sbjct: 1 MNIQALSLKDLNELVSEVIRLQIRGSYWLEAELSQMNENR--GHCYMEFVQKDETSNNII 58 Query: 62 SRIDAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG- 112 +R W T ++I+ G++ +V F + I+E + P Sbjct: 59 ARASGRCWASTWSQIKLYFERITGQTLHAGMKIMVQVSPQ-FHVQYGFSWIVEDINPEFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G ++ + +L +EG+F Q + + IA+I+S T A D +++ Sbjct: 118 MGDMMRKRNEIIAQLKDEGVFDLQKELRLSSFASRIAIISSNTAAGYGDFCNQLANNEFG 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + +F +QG+ +I + ++N +E D++++ RGGG+ DL F+ Sbjct: 178 LTFQTELFQATMQGNRAEGDIIACLNEINAREEE-----FDVVVIIRGGGATADLSSFDT 232 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 ++ +AN +PII+ IGH+ D ++ D + L+ TPT AA + Sbjct: 233 LLLAENVANFPLPIITGIGHDRDESVLDLVSFLKVKTPTAAAAFLIE------------- 279 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 LS + R+ + + + + + R+Y H Sbjct: 280 ------------------------------RLSSTLSRVLEAEKNIHDYVHLRLEREYNH 309 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 N++ +R+ F + +++ H+++++++ + + Sbjct: 310 LNNLASRVPLLFSVVK--------TQQEFHLDRLLQKMITTMTAY--------------- 346 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + ++ ++ + I +++ + L+S + LKRGY+ +N Sbjct: 347 ---LHQEQHKVEIRYNQLLSGVQRTITDNKYHINLIEQKLKSLDPEILLKRGYSMTL-SN 402 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVI 499 IT L + +G+ +IV Sbjct: 403 GKVITNANQLKDGDVLTTKLSEGEVKSIVK 432 >gi|290890779|ref|ZP_06553846.1| hypothetical protein AWRIB429_1236 [Oenococcus oeni AWRIB429] gi|290479551|gb|EFD88208.1| hypothetical protein AWRIB429_1236 [Oenococcus oeni AWRIB429] Length = 404 Score = 199 bits (506), Expect = 8e-49, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 183/360 (50%), Gaps = 16/360 (4%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-SRIDAIIWKG 71 +V L+ +L + L V + GEI GY+ SSG AYF L+D S I A + Sbjct: 9 LTVGTLNRYLSAKFVHDPYLKQVSLTGEIFGYKI--SSGSAYFELRDEDESSIRAYVSPT 66 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L F + G + ++ + + + + I S+ P+G G L L + K KL +EG Sbjct: 67 ILRGFPFDFKSGDKVNLVADVRLYGKRAYASLFIFSMQPAGLGELYLKLAELKNKLTKEG 126 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ + + PK IAVITS TGAVI DI I R P L++ +F VQGD KE+ Sbjct: 127 IFNR-PTKELNYFPKKIAVITSKTGAVIHDISSTIGHRNPNLKIELFESSVQGDSAVKEL 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +A+ + + D II+ARGGGS+ DLW FNDE +VR +++ S P+IS+IGHE Sbjct: 186 VSAVKKADQS-------DADAIIIARGGGSMLDLWPFNDEQLVRLLSSLSKPVISSIGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TL D AAD R TPT AA P +++L L A ++ I +L++ +N L Sbjct: 239 TDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLTALMSVDIKQLLQKNLNRFEYL 298 Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + DQ +L L L ++ + + F ++ ++ + + + + Sbjct: 299 ANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNIQQFANLTAKLDALSPLKVLDR 358 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 6/187 (3%) Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 + L + + I + + + K IL+ + +++Q+ Sbjct: 218 EQLVRLLSSLSKPVISSIGHETDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLT 277 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCH 439 I ++ + L F ++ L R+ + + + Sbjct: 278 ALMSVDIKQLLQKNLNRFEYLANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNI 337 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + T L + + L RG++ + I + L K I I F G A A + Sbjct: 338 QQFANLTAKLDALSPLKVLDRGFSLTFKGD-RLIKNAQQLKEKDHIKILFAKGSALAEIK 396 Query: 500 NKAPPKE 506 + + Sbjct: 397 EISDDRR 403 >gi|317506620|ref|ZP_07964411.1| exonuclease VII [Segniliparus rugosus ATCC BAA-974] gi|316255052|gb|EFV14331.1| exonuclease VII [Segniliparus rugosus ATCC BAA-974] Length = 295 Score = 199 bits (506), Expect = 9e-49, Method: Composition-based stats. Identities = 91/300 (30%), Positives = 149/300 (49%), Gaps = 15/300 (5%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + +SV ++ + ++ L + + G+I+ S A+ +L+D Sbjct: 5 PGDKGANAEDSPWSVKTVAMKIAGWIDR-LGSIWITGQIAELSARPGSRVAFVTLRDTAE 63 Query: 63 ----RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLT 118 +I + L K +EG E +V GK + + I + + G G LL Sbjct: 64 NVSLQIMCPM---KLLKENPEIKEGSEVVVHGKPSFYTARGTLAIWADQIRAVGVGELLA 120 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIF 177 +E+ +K+L EGL + K P+PF+P + ++T A +D+L R+P +R + Sbjct: 121 RIERLRKQLAAEGLTDPRRKRPLPFLPAGVGLVTGRASAAQQDVLSIARARWPQVRFHLR 180 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 V VQG + + A L+E + ++IILARGGGS+EDL F++E + RA+A Sbjct: 181 EVAVQGPGAAQAVIAA------LRELQGLSGVEVIILARGGGSVEDLLTFSEEALCRAVA 234 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 +P++SAIGHETD L D AD+RA TPT AA+ VP +S L + R + Sbjct: 235 ACPVPVVSAIGHETDRPLVDDVADVRAATPTDAAKRTVPDVAVERSRLHEMRGRSAAALR 294 >gi|116491234|ref|YP_810778.1| exodeoxyribonuclease VII large subunit [Oenococcus oeni PSU-1] gi|116091959|gb|ABJ57113.1| Exodeoxyribonuclease VII large subunit [Oenococcus oeni PSU-1] Length = 404 Score = 199 bits (506), Expect = 9e-49, Method: Composition-based stats. Identities = 119/360 (33%), Positives = 182/360 (50%), Gaps = 16/360 (4%) Query: 15 YSVSELSYHLKHIV--ESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH-SRIDAIIWKG 71 +V L+ +L + L V + GEI GY+ SSG AYF L+D S I A + Sbjct: 9 LTVGTLNRYLSAKFVHDPYLKQVSLTGEIFGYKI--SSGSAYFELRDEDESSIRAYVSPT 66 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 L F + G + ++ + + + + I S+ P+G G L L + K KL +EG Sbjct: 67 ILRGFPFDFKSGDKVNLVADVRLYGKRAYASLFIFSMQPAGLGELYLKLAELKNKLTKEG 126 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEI 190 +F+ + + PK IAVITS TGAVI DI I R P L++ +F VQGD KE+ Sbjct: 127 IFNR-PTKELNYFPKKIAVITSKTGAVIHDISSTIGHRNPNLKIELFESSVQGDSAVKEL 185 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +A+ + + D II+ARGGGS DLW FNDE +VR +++ S P+IS+IGHE Sbjct: 186 VSAVKKADQS-------DADAIIIARGGGSTLDLWPFNDEQLVRLLSSLSKPVISSIGHE 238 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 TD TL D AAD R TPT AA P +++L L A ++ I +L++ +N L Sbjct: 239 TDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLTALMSVDIKQLLQKNLNRFEYL 298 Query: 311 LKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + DQ +L L L ++ + + F ++ ++ + + + + Sbjct: 299 ANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNIQQFANLTAKLDALSPLKVLDR 358 Score = 97.5 bits (241), Expect = 5e-18, Method: Composition-based stats. Identities = 25/187 (13%), Positives = 56/187 (29%), Gaps = 6/187 (3%) Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 + L + + I + + + K IL+ + +++Q+ Sbjct: 218 EQLVRLLSSLSKPVISSIGHETDVTLTDLAADYRVETPTAAANKVTPAILDYRNNLDQLT 277 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCH 439 I ++ + L F ++ L R+ + + + Sbjct: 278 ALMSVDIKQLLQKNLNRFEYLANSPALKSFDQVFFNHEQKLQNLNLRLANSFAGEFQKNI 337 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + T L + + L RG++ + I + L K I I F G A A + Sbjct: 338 QQFANLTAKLDALSPLKVLDRGFSLTFKGD-RLIKNAQQLKEKDHIKILFAKGSALAEIK 396 Query: 500 NKAPPKE 506 + + Sbjct: 397 EISDDRR 403 >gi|269125342|ref|YP_003298712.1| exodeoxyribonuclease VII large subunit [Thermomonospora curvata DSM 43183] gi|268310300|gb|ACY96674.1| exodeoxyribonuclease VII, large subunit [Thermomonospora curvata DSM 43183] Length = 403 Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats. Identities = 93/370 (25%), Positives = 167/370 (45%), Gaps = 15/370 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62 + + S + P V + + + L + V G+I+ G Y +L+D + Sbjct: 1 MAMQTSAESPV-PVRTVLNAVAGWI-GRLGRIWVEGQITELNRRA--GTVYLTLRDPVAN 56 Query: 63 -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + + G ++ K + + + + P G G LL LE Sbjct: 57 MSVRVVGPRAVFEAAGPAVTGGARVVICAKPDFWVNRGAFSLSALEVRPVGVGELLARLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K+ L EGLF + K P+PF+P ++ +I D+L+ R+P +R I Sbjct: 117 RLKQVLAAEGLFRPERKRPLPFLPAVVGLICGRESDAEHDVLRNARRRWPAVRFRIEHAA 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG + E+ A+ +L+ P+ ++I++ARGGGS+EDL F+DE +VRA+A + Sbjct: 177 VQGAQAVPEVLEALRRLDA------DPQVEVIVIARGGGSMEDLLPFSDEALVRAVAAAR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D AD+RA TPT AA+ VP + L R + + Sbjct: 231 TPVVSAIGHEQDSPLLDLVADVRASTPTDAAKHIVPDVREQLRLIRQLRDRGRRCLAGRL 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + ++ L ++ L + + + +++ L L + R+ H H R++ Sbjct: 291 ERELAWLEAMRSRPALADPVREVERKAEQVEGLRERARRALAASLEREADHLAHTRARLR 350 Query: 359 SDFLIHNIQK 368 + +++ Sbjct: 351 ALSPAATLER 360 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 58/155 (37%), Gaps = 5/155 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK-- 410 ++ +++ + + E+ + I Q+ + R + + ++A L +R + Sbjct: 248 LVADVRASTPTDAAKHIVPDVREQLRLIRQLRDRGRRCLAGRLERELAWLEAMRSRPALA 307 Query: 411 ---NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + ++ L R L+ ++ ++ T L++ + TL+RGY +Q Sbjct: 308 DPVREVERKAEQVEGLRERARRALAASLEREADHLAHTRARLRALSPAATLERGYAIVQR 367 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + + +L+ G+ A + A Sbjct: 368 PDGTVLRAAAQAEPGEELLVRLAGGRLRATAVGPA 402 >gi|326575732|gb|EGE25655.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis CO72] Length = 536 Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats. Identities = 104/522 (19%), Positives = 181/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ ++S L+ + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKVIL-------GIESHLVKM 357 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + RL K L + + S + Sbjct: 358 TRQAVATMERLTKITNTRLTMAKANSQRQIEQIQRSSLHAVNMA---------------- 401 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A++ +L + Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKAALIALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534 >gi|317968034|ref|ZP_07969424.1| exodeoxyribonuclease VII large subunit [Synechococcus sp. CB0205] Length = 383 Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats. Identities = 91/312 (29%), Positives = 152/312 (48%), Gaps = 9/312 (2%) Query: 12 HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 P YSV+EL+ + ++E + +S R GH + +L D + I ++W Sbjct: 7 IPRYSVAELNQAIGSLLERGFAPRFLLEATVS--RPQLKKGHLWLTLVDESASISGVVWS 64 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 ++ + P EG LV+GK+ + + + I + P+ +L E+ L E Sbjct: 65 SQRERLSYQPSEGDGVLVVGKLNFWASRANLCVQILDIRPA-LSAVLRQFERVCALLEPE 123 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKE 189 GL S + K P+P +P IA++TS + + D+L+ R+P V + P+ VQG Sbjct: 124 GLLSAERKRPLPEMPAAIALLTSVPSSALADMLRTAQERWPATTVHVVPIPVQGMVAATI 183 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +L + E + + I+LARGGG+ EDL F+DE + R +A S IP+++ +GH Sbjct: 184 R----KRLAEVLERSDELQIEAIVLARGGGAREDLAVFDDEELARDLAASPIPVVTGLGH 239 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E D T+AD AD RA TPT A +P +E L L + A + +++ ++ L Sbjct: 240 EDDTTVADLVADYRAATPTAAVVALLPDREALSQGLQHRLAIVRQLMLHRLQQGQQRLAL 299 Query: 310 LLKALPNSDQTL 321 + L +L Sbjct: 300 QRQRLEQCHPSL 311 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 13/134 (9%), Positives = 44/134 (32%), Gaps = 23/134 (17%) Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ-- 450 L + A L ++ + + ++ H+++ +++ + L+ Sbjct: 248 LVADYRAATPTAAVVALLPDREALSQGLQHRLAIVRQLMLHRLQQGQQRLALQRQRLEQC 307 Query: 451 ---------------------SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 + + + L+RG++ ++ + + + + + Sbjct: 308 HPSLIIERERLRLQQRLQLLEALSPQRLLRRGFSLVRRADGSLLRSVSQSQAGDALRLEL 367 Query: 490 FDGQANAIVINKAP 503 DG+ A+V +P Sbjct: 368 VDGKIEAVVEQVSP 381 >gi|256831985|ref|YP_003160712.1| exodeoxyribonuclease VII, large subunit [Jonesia denitrificans DSM 20603] gi|256685516|gb|ACV08409.1| exodeoxyribonuclease VII, large subunit [Jonesia denitrificans DSM 20603] Length = 467 Score = 198 bits (504), Expect = 2e-48, Method: Composition-based stats. Identities = 87/369 (23%), Positives = 163/369 (44%), Gaps = 13/369 (3%) Query: 5 SQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHS 62 + + V LS + ++ + + + G+I +G A+ +L+D Sbjct: 54 KAAETTRDNPWPVRVLSTKIAEYIDRMVP-LWIEGQIVQLNRRPGAGMAFVTLRDTEQDM 112 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + I+ L EG + K T + +Q+ + G G LL +E+ Sbjct: 113 SLPLSIFARNLAAAG-PLTEGAHVVAQVKPTFWTKRGSFQLQASEIAQVGVGELLARIEQ 171 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K L EGLF K P+PF+P+ + +I + D+L R+P ++ + V V Sbjct: 172 LKNSLAAEGLFDASRKKPLPFLPQRVGLICGRESEAMHDVLVNAQLRWPAVQFEVREVAV 231 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG +++ A L+E D+I++ARGGG++EDL F++E +VR +A + Sbjct: 232 QGVNAVPQVSAA------LRELDDRDDVDVIVIARGGGAVEDLLPFSNESLVRLVAGART 285 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHE D + D AD+RA TPT AA+ VP+ Q+ L + +R+ + + Sbjct: 286 PVVSAIGHERDTPILDLVADVRASTPTDAAKRIVPMVAEEQAGLDSALSRIRGALSAQLD 345 Query: 302 YKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L D + + + L L+ ++ R + + ++++ Sbjct: 346 REYAGLSAVRSRPVLARPDTLIDGGAATITQARERLHVALDRLLLRAGGQVSELRAQVRA 405 Query: 360 DFLIHNIQK 368 +++ Sbjct: 406 LSPAATLER 414 Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 58/166 (34%), Gaps = 5/166 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-----E 407 ++ +++ ++ + E+Q ++ + + + + + A L +R Sbjct: 302 LVADVRASTPTDAAKRIVPMVAEEQAGLDSALSRIRGALSAQLDREYAGLSAVRSRPVLA 361 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I I + R+ L + VS +++ + TL+RGY +Q Sbjct: 362 RPDTLIDGGAATITQARERLHVALDRLLLRAGGQVSELRAQVRALSPAATLERGYAIVQG 421 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 + + + ++ + I + G A V TK + Sbjct: 422 GDGSVVRDVAQVSVPSDITVTVARGSLTAAVTAVQAEVFPSTKDEK 467 >gi|326565745|gb|EGE15907.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis BC1] Length = 536 Score = 198 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E+ L + + + L + ++ R + Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534 >gi|326560526|gb|EGE10908.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis 7169] Length = 536 Score = 198 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDADQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E+ L + + + L + ++ R + Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534 >gi|326570395|gb|EGE20435.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis BC8] Length = 536 Score = 198 bits (502), Expect = 3e-48, Method: Composition-based stats. Identities = 105/522 (20%), Positives = 181/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A ++S L+ + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL-------GIESHLVKM 357 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + RL K L + + S + Sbjct: 358 TRQAVATMDRLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNMA---------------- 401 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534 >gi|326564877|gb|EGE15081.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis 12P80B1] Length = 536 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E+ L + + + L + ++ R + Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534 >gi|121583248|ref|YP_973684.1| exodeoxyribonuclease VII large subunit [Polaromonas naphthalenivorans CJ2] gi|120596506|gb|ABM39942.1| Exodeoxyribonuclease VII large subunit [Polaromonas naphthalenivorans CJ2] Length = 576 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 90/502 (17%), Positives = 167/502 (33%), Gaps = 27/502 (5%) Query: 16 SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAII 68 S+S L + V V E+ + GH Y + + + + A+I Sbjct: 77 SLSSLLGDVSRAVAQAYKAGVWTLVEVVEL--RANGGHVYLEVSERDAHGAVLAKARAVI 134 Query: 69 WKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTA 119 W+ T + I GI+ LV + F + + I+++ P+ G L Sbjct: 135 WQSTASAILPEFERATGAQLAPGIKLLVRARP-VFKAQYGFSLDIDAIDPAYTLGELEAR 193 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVII 176 + +L EG+F+ P P+ + V++ GA + D R Sbjct: 194 KRDIRTRLQAEGVFAANKNLPPPWDFHNVLVVSPMGGAGLGDFQAEADRLQAHGICRFTY 253 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 + QG+ P EI +A+ G D +++ RGGG++ DL ND + R + Sbjct: 254 ALSRFQGEGAPAEIRDALQAALGQGTGTVATPFDAVVIIRGGGAVNDLAWLNDYSLARLV 313 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS-LINLEARLNNI 295 + IP+++ IGHE D TL D A R TP+ N E Sbjct: 314 CDLPIPVLTGIGHERDTTLLDEVAHARYDTPSKVIAGIEQRILQRVDEVKANFEQVSALA 373 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + + + L+ R + + + + + Sbjct: 374 ARASQAAREQAGKLDMTVRLEALRHLAQGRQAASQSLAAIRIDAMQCMRSAAEQSRDALQ 433 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 +K+ L R QI + E + + + E+ + Sbjct: 434 AVKTKVLTQLADAKRGVPALWS----QIALGSEHALRTASAEGDSFIGSVLERARQDASR 489 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 + + ++ T R + + TL+RG+ +++ + +T+ Sbjct: 490 ARQVSSDALNTVSNSAKLLVRKAATDSQALIREIAGQGPEKTLQRGFAIVRNQSGKPLTR 549 Query: 476 KRNLATKTRILINFFDGQANAI 497 I I F DG+ AI Sbjct: 550 ALQARDGAAIEIEFQDGRVAAI 571 >gi|116073872|ref|ZP_01471134.1| Exonuclease VII, large subunit [Synechococcus sp. RS9916] gi|116069177|gb|EAU74929.1| Exonuclease VII, large subunit [Synechococcus sp. RS9916] Length = 389 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 92/300 (30%), Positives = 150/300 (50%), Gaps = 10/300 (3%) Query: 9 SLDHPE-YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 + D P YSV EL+ + ++E V+ S + GH + +L D + I A Sbjct: 2 TADAPPTYSVRELNTAIGSLLERGFAPRFLVQATAS--KPQVKKGHLWITLTDGEASITA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 + W L +++++P +G V+GK+ + + + + L PS T+L E + Sbjct: 60 VAWASKLKQLDYVPADGEGVTVVGKLNFWAARATLAVQVLDLRPS-LNTVLRRFEAVRAL 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L EG+ + P+P P+ +AV+TS + + D+L+ R+PL +++ P+ VQGD Sbjct: 119 LEAEGVIDPLKRRPLPTAPRRVAVLTSVPSSALADMLRTARERWPLSELLVVPIPVQGDV 178 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 + L L++ + D ++LARGGGS EDL F+DE + RAIA +P+++ Sbjct: 179 SNRIC----SVLQRLRDAPEPLQADALVLARGGGSREDLMVFDDEQLCRAIATFPVPVVT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 IGHE D T+AD AD RA TPT A +P ++ L RL N ++ K Sbjct: 235 GIGHEDDLTVADLVADHRAATPTAAIVSLLPSRDTALLQLQERLRRLANQRQWWLERKRQ 294 Score = 70.6 bits (171), Expect = 6e-10, Method: Composition-based stats. Identities = 10/126 (7%), Positives = 35/126 (27%), Gaps = 26/126 (20%) Query: 413 IFYLHTHIKKLITRIEFILSHK---IKSCHTSVSITTRI--------------------- 448 + T + +L R+ + + + ++ + + Sbjct: 264 LPSRDTALLQLQERLRRLANQRQWWLERKRQVLWERRQRWQLLQPQVLLQQRRDQLLQRQ 323 Query: 449 --LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 L++ + + L RG+ ++ + + +++ DG + P Sbjct: 324 QLLRALSPQRWLARGFAILESPEGTVFRSVSEVKKGSDLVVRLNDGTIAVQAQSIRPSSA 383 Query: 507 QPTKKC 512 + Sbjct: 384 EQPVTP 389 >gi|326560350|gb|EGE10737.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis 46P47B1] Length = 540 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 72 NNLADARLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 129 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 130 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 188 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 189 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 248 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 249 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 308 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A + Sbjct: 309 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 354 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E+ L + + + L + ++ R + Sbjct: 355 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 404 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 405 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 438 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 439 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 496 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 497 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 538 >gi|169836914|ref|ZP_02870102.1| exodeoxyribonuclease VII large subunit [candidate division TM7 single-cell isolate TM7a] Length = 287 Score = 197 bits (501), Expect = 4e-48, Method: Composition-based stats. Identities = 92/272 (33%), Positives = 146/272 (53%), Gaps = 11/272 (4%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 P +VS+ E+ + + GE+ + I+ S +F+LKD S ++ + K Sbjct: 2 IPTLTVSDFIAITNQSFETIYPSIFIEGEVESF-SINQSKFVFFNLKDKESSVNCFMMKF 60 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + E+G+ V + K+ + I+S+ P G G++ + E + KL EG Sbjct: 61 A---LHISIEDGMYVRVKARPKI-TQKGKFSLTIDSIRPIGEGSVKKSFELLRAKLATEG 116 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPKEI 190 LF + K +P++P+ IAVI+S A D ++ R + II +VQG++ P+ I Sbjct: 117 LFDESRKRILPWLPRKIAVISSKQAAGYIDFMKIADSRIKGVDFIICNAQVQGNDAPESI 176 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 NAI + N + PD+I + RGGGS +DL FNDE +VRAIA S +P+I+ IGHE Sbjct: 177 VNAIEKCNKMS-----NLPDVIAIVRGGGSADDLATFNDERVVRAIAASRVPVITGIGHE 231 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 D TLAD +D+RA TPT AA + +P + ++ Sbjct: 232 IDTTLADLVSDIRAATPTHAATILLPSLDDVR 263 >gi|332877856|ref|ZP_08445594.1| exodeoxyribonuclease VII, large subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684151|gb|EGJ57010.1| exodeoxyribonuclease VII, large subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 431 Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats. Identities = 91/504 (18%), Positives = 169/504 (33%), Gaps = 97/504 (19%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL-------KDNHSRIDA 66 ++ EL+ ++ +E L ++ E+S R + +GH Y +D ++ Sbjct: 4 LTLYELNGLVRGTLERTLQAEYWLQAELSEVREAY-NGHCYLEFVQKSVNGRDLVAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW G ++ + E G++ LV +T Y + + + P+ G + Sbjct: 63 VIWAGMYRLLKPMFERETGRTLSPGLKVLVKVGVTFHELYG-YSLTVTDIDPAYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L +G+ +D + +P IAVI+S T A D ++ R V Sbjct: 122 RLRREILARLEADGILNDNKELSLPLSANRIAVISSATAAGYGDFCNQLLRNDYRLRFTV 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG+ + A+ + ++ D +++ RGGG+ DL F+ ++ Sbjct: 182 RLFPAVMQGEHVESSVLAALDAVMARQDDW-----DAVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AA + LEA Sbjct: 237 ACAQFPLPVITGIGHERDDTVIDIVAHTRVKTPTAAAAFLI---------HHQLEAASRL 287 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + R R++RL L + R R + Sbjct: 288 EAVAREIQQQAQGRM------------EGERLRVERLSARLSAAALQVRTRGERRLEQMA 335 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + R + I + + R+ Sbjct: 336 TCLF-HAGRQRLSDERHRLDLYAGRIGRGIPV-------------------------RME 369 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++ L + E LKRGY+ + Sbjct: 370 RERFRLQLLQQKCEAA----------------------DPVLLLKRGYSMTF-CGGKLVR 406 Query: 475 QKRNLATKTRILINFFDGQANAIV 498 + L I +G+ ++V Sbjct: 407 KASELKGGEEITTCLAEGEIRSVV 430 >gi|325964036|ref|YP_004241942.1| exodeoxyribonuclease VII large subunit [Arthrobacter phenanthrenivorans Sphe3] gi|323470123|gb|ADX73808.1| Exodeoxyribonuclease VII large subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 446 Score = 197 bits (500), Expect = 5e-48, Method: Composition-based stats. Identities = 98/399 (24%), Positives = 177/399 (44%), Gaps = 14/399 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + + LS LK ++ V G++ S+ AY +L+D + Sbjct: 21 PATAAETSPDNPWPLQLLSQKLKAHIDRT-PSAWVEGQVIELNRRGSN--AYLTLRDVDA 77 Query: 63 RID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + A +W L + E G + + K + + + +++ + P G G LL + Sbjct: 78 EVSLPASVWTKVLERQNLPLERGSRVVALLKPEFWLKTGRLNMLVRDIRPVGLGDLLARI 137 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ ++ L EGLF+D K P+P +P I +IT +DI + + R+P + I V Sbjct: 138 ERLRQALSAEGLFADSRKKPLPLLPHRIGLITGRDSDAKKDIQRNAALRWPAVEFEIREV 197 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ ++ A+ L+ P D+I++ARGGG++EDL FN E ++RA+A + Sbjct: 198 AVQGNTAVAQVVRALRDLDAA------PEVDVIVIARGGGALEDLLPFNSEELIRAVAAA 251 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D L D ADLRA TPT AA+ VP + + +L + RL Sbjct: 252 VTPVVSAIGHEADRPLLDDVADLRASTPTDAAKRIVPEVSEELAGVRQARVQLRRCMERL 311 Query: 300 IKYKINTLN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + L L + ++ ++RL R + + R H+ ++ Sbjct: 312 VDRESDRLASLHSRPVLAAPEGLVTVRAEEIERLLRRSSAAVSSTVVRAADQLEHLKAQV 371 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 ++ + + + + Q + + Sbjct: 372 RALSPQKTLDRGYAVVELAGKRAGQSGTSGHAVVRRPAE 410 Score = 77.1 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 47/148 (31%), Gaps = 12/148 (8%) Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHML--REQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +++ + + + +++A LH + + I++L+ R +S + Sbjct: 298 RQARVQLRRCMERLVDRESDRLASLHSRPVLAAPEGLVTVRAEEIERLLRRSSAAVSSTV 357 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN----------FITQKRNLATKTRI 485 + +++ + + TL RGY ++ + + + Sbjct: 358 VRAADQLEHLKAQVRALSPQKTLDRGYAVVELAGKRAGQSGTSGHAVVRRPAEAPAGAPL 417 Query: 486 LINFFDGQANAIVINKAPPKEQPTKKCQ 513 I +G+ A T + Sbjct: 418 SIRVAEGRFGATSTGTLEQHATETGEPN 445 >gi|296113152|ref|YP_003627090.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis RH4] gi|295920847|gb|ADG61198.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis RH4] Length = 517 Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats. Identities = 103/522 (19%), Positives = 179/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 49 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 106 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 107 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 165 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 166 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 225 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 226 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 285 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A + Sbjct: 286 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 331 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E+ L + + + L + ++ R + Sbjct: 332 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 381 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 382 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 415 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 416 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 473 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG A+A++ + + K Sbjct: 474 IHNAQTNESIHSTKTLQQNQSVKITFKDGTASAVIKDISTHK 515 >gi|159902646|ref|YP_001549990.1| exodeoxyribonuclease VII [Prochlorococcus marinus str. MIT 9211] gi|159887822|gb|ABX08036.1| Exodeoxyribonuclease VII [Prochlorococcus marinus str. MIT 9211] Length = 382 Score = 196 bits (499), Expect = 7e-48, Method: Composition-based stats. Identities = 98/329 (29%), Positives = 165/329 (50%), Gaps = 11/329 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA 66 ++ P YSV EL++ + H++ + +S + +GH + +L D H+ I A Sbjct: 2 DTASLPSYSVQELNHAIGHLLSRGFSPRFYLHATVS--KSQLKNGHLWLTLTDGHASISA 59 Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 +IW TL K + P + ++GK+ + + + I + PS T+L E +K Sbjct: 60 VIWASTLKKFTYRPNDQDGIEILGKLNFWENRANLVVQIIEMRPS-ISTVLRKFEVVRKL 118 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDE 185 L++EGL + + P+P P+ IAV+TS + + DIL+ R+PL +V IFP+ VQGD Sbjct: 119 LIQEGLIDESRRRPLPNYPRNIAVLTSVPSSALADILRTAKERWPLTKVFIFPIPVQGDV 178 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 K L L + + I+LARGGGS EDL F++E + R+ ++ IP+I+ Sbjct: 179 ASKIT----NVLANLVKHYRHFSIEAIVLARGGGSREDLMVFDNEELCRSFSSLPIPLIT 234 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 +GHE D T+ D AD R+ TPT A +P +E + + + RL + I+ + + Sbjct: 235 GLGHEDDLTVVDLVADHRSATPTAAIVDLLPSREIAKGHCLQMRHRLKDYFTWTIRKEKD 294 Query: 306 TLNSLLKALP--NSDQTLSCSRYRLDRLP 332 N L + ++ + LD+ Sbjct: 295 LFNERLIKWKASSPLTLINRFKENLDKRS 323 Score = 72.1 bits (175), Expect = 2e-10, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 3/120 (2%) Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 ++ + + + + + + K I ++ Sbjct: 263 LLPSREIAKGHCLQMRHRLKDYFTWTIRKEKDLFNERLIKWKA---SSPLTLINRFKENL 319 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 +R+L + + ++ KRG+ + + ++N I ++ ++ I DG + V N Sbjct: 320 DKRSRLLLALSPESLFKRGFCIVTNQSSNAIRNCNDVEVADKLTIQLIDGYIESSVENIH 379 >gi|326571082|gb|EGE21106.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis BC7] Length = 536 Score = 196 bits (498), Expect = 7e-48, Method: Composition-based stats. Identities = 102/522 (19%), Positives = 178/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDADQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDVDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL--------------GI 350 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E+ L + + + L + ++ R + Sbjct: 351 ESHLVKMTRQAVATMERLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNM---------- 400 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 401 --------------------------AKKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534 >gi|298372301|ref|ZP_06982291.1| exodeoxyribonuclease VII, large subunit [Bacteroidetes oral taxon 274 str. F0058] gi|298275205|gb|EFI16756.1| exodeoxyribonuclease VII, large subunit [Bacteroidetes oral taxon 274 str. F0058] Length = 434 Score = 196 bits (497), Expect = 9e-48, Method: Composition-based stats. Identities = 91/505 (18%), Positives = 188/505 (37%), Gaps = 96/505 (19%) Query: 10 LDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNH------S 62 ++ +S+ EL+ +K +++ + +R +IS +++GH Y L + + Sbjct: 1 MEQQSFSLYELNITIKKLLKEIFLESLWIRAQISEI-HTNANGHCYIELIEYDTDRRVIA 59 Query: 63 RIDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GS 113 R A IW T + + + G+E LV I + I + P + Sbjct: 60 RQKATIWATTYKMLRPYFEQTAGYELQAGLEILVCCTIEMHESYG-LSLNIIDINPEYTT 118 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RF 170 G + EK +L ++G+ +P +P+ IAVI+S T A D +I+ + Sbjct: 119 GKIALDKEKILNRLSQDGVIELNRSLQLPALPRRIAVISSATAAGYEDFCHQINNNPYGY 178 Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 +F ++QG+E + + A+ + + D +++ RGGG+ DL F++ Sbjct: 179 RFHTELFDARMQGNETEQSVTAALDTIFERADE-----FDAVVIIRGGGATSDLSAFDNY 233 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 I AIA +P++ IGH D T++D A TPT AA Sbjct: 234 NIATAIAQFPLPVLCGIGHLRDETVSDIVAYKSVKTPTAAA------------------- 274 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 + + ++ L R+ R +I I + Sbjct: 275 -----------------EFFVDIIREQEERLVWLTERIRRAAATNVERQKIRINTVWYRL 317 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 +++ ++ ++ + +++ L +L + Sbjct: 318 HYL---------------PKEILVGEYHRLDR------------------QLSLLLTAAR 344 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 + + + L R+ + + ++ + + + L++ + NTL+RG+ I+ N Sbjct: 345 HTLRSSQHRVNYLQYRVLNYVRQRTETERHRIHLIEQRLEATSPTNTLRRGFAIIR-QNG 403 Query: 471 NFITQKRNLATKTRILINFFDGQAN 495 + + L + I F DG + Sbjct: 404 KTVRSAKALDIRQAFQIVFHDGTID 428 >gi|38638580|ref|NP_943166.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas sp. ND6] gi|34335368|gb|AAP44266.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas sp. ND6] Length = 492 Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats. Identities = 82/518 (15%), Positives = 168/518 (32%), Gaps = 71/518 (13%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH 61 P S + ++ ++S ++ + + + V E+S ++ +GH Y + ++ Sbjct: 28 PVSAPDPIEQH-LTLSAYLTQIQKAIRAAVPDSCWVVAELSDFKRRP-NGHCYMDILESR 85 Query: 62 -----SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESL 108 ++ ++ K+ LP+ G+ L+ + F + +++ + Sbjct: 86 EGAEVAKARCTMFANIAGKVLGEWQQATGGLPQAGMNVLLKVRAD-FSPQFGFSLMVTGI 144 Query: 109 IPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167 PS G + ++K L E F Q P P +AV+ A + D + Sbjct: 145 DPSYTLGDMQAKMQKIIASLKERQWFDLQRGLPSPGGFWRVAVVAPHEAAGLADFRRDAE 204 Query: 168 CRFPLRV---IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 V F QG + I +A+ ++ + + D + + RGGG+ DL Sbjct: 205 QLAAAEVCGFEYFSATFQGRDASDSIRSALRTVHEQHQQQP---FDAVCIIRGGGAKSDL 261 Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284 ND + + +P+ + IGHE D + D A R TP+ S+ Sbjct: 262 AWLNDANLAAWVCRLPVPVFTGIGHEIDECVLDLVAHRRFDTPSKVIGFIKTALMSEAST 321 Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 R N +I+RL+ + L+ R + L E L+ Sbjct: 322 ARAQVERANGMILRLVSGQAPHLDRAWSTFS---------RRVTETLHGEHRQLLQQ--- 369 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 ++ K R +L +Q+ Q+ + + Sbjct: 370 ------------------QSSLDKGRDRLLSQQRMALQLAQDRFSRLGAGL--------- 402 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 +R+ + I + + + + L RG+ Sbjct: 403 --------CVAERQRGLFAASRVASLSRALIAREISRLELACTVYDKTNPLALLGRGFAL 454 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 ++ I+ + ++ + F DG A V Sbjct: 455 VRGPGGEIISSAQQARDAGKLDLAFADGHVIAEVAKAQ 492 >gi|326577197|gb|EGE27091.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis O35E] Length = 536 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 104/522 (19%), Positives = 181/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDIDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + +K+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMQKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A ++S L+ + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL-------GIESHLVKM 357 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + RL K L + + S + Sbjct: 358 TRQAVATMDRLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNMA---------------- 401 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG +A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNQSVKITFKDGTVSAVIKDISTHK 534 >gi|332184255|gb|AEE26509.1| Exodeoxyribonuclease VII large subunit [Francisella cf. novicida 3523] Length = 461 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 99/506 (19%), Positives = 189/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ + + S + I + P+ G Sbjct: 64 NCWANKADYIHNKFSLATGEKLSSDMKVLMKVTVN-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ + Sbjct: 123 ARKIQILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCKF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC K ++ A ++ D I+L RGGGS DL FN+ + Sbjct: 183 DIYEAKMQGAECAKSVSAAFTKI-----ETKAVNYDAIVLIRGGGSQADLDWFNNLLPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NTIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTSQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKAAISIARGLVKLYGKSMDMQYDSIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TLKRG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQIISVSIEPTLKRGFSITKTQDGRYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|332678473|gb|AEE87602.1| Exodeoxyribonuclease VII large subunit [Francisella cf. novicida Fx1] Length = 461 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 94/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADHIHNKFSLVTGEKLSSNMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D + TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKKFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L + + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGRSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|296100248|ref|YP_003617165.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida] gi|295443614|dbj|BAJ06493.1| exodeoxyribonuclease VII large subunit [Pseudomonas putida] Length = 464 Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats. Identities = 81/506 (16%), Positives = 163/506 (32%), Gaps = 70/506 (13%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL---KD--NHSRIDAII 68 ++S ++ + + + V E+S ++ +GH Y + +D ++ + Sbjct: 11 LTLSAYLTQIQKAIRAAVPDSCWVVAELSDFKRRP-NGHCYMDILESRDGAEVAKARCTM 69 Query: 69 WKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTA 119 + K+ LP+ G+ L+ + F + +++ + PS G + Sbjct: 70 FANVAGKVLGEWQQATGGLPQAGMNVLLKVRAD-FSPQFGFSLMVTGIDPSYTLGDMQAK 128 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRV---II 176 ++K L E F Q P P +AV+ A + D + V Sbjct: 129 MQKIIASLKERQWFDLQRGLPSPGGFWRVAVVAPHEAAGLADFRRDAEQLAAAEVCGFEY 188 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 F QG + I +A+ ++ + + D + + RGGG+ DL ND + + Sbjct: 189 FSATFQGRDASDSIRSALRTVHEQHQQQP---FDAVCIIRGGGAKSDLAWLNDANLAAWV 245 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 +P+ + IGHE D + D A R TP+ S+ R N +I Sbjct: 246 CRLPVPVFTGIGHEIDECVLDLVAHRRFDTPSKVIGFIKTALMSEASTARAQVERANGMI 305 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 +RL+ + L+ R + L E L+ Sbjct: 306 LRLVSGQAPHLDRAWSTFS---------RRVTETLHGEHRQLLQQ--------------- 341 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 ++ K R +L +Q+ Q+ + + Sbjct: 342 ------QSSLDKGRDRLLSQQRMALQLAQDRFSRLGAGL-----------------CVAE 378 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 +R+ + I + + + + L RG+ ++ I+ Sbjct: 379 RQRGLFAASRVASLSRALIAKEISRLELACTVYDKTNPLALLGRGFALVRGPGGEIISSA 438 Query: 477 RNLATKTRILINFFDGQANAIVINKA 502 + ++ + F DG A V Sbjct: 439 QQARDAGKLDLAFADGHVIAEVAKAQ 464 >gi|254369144|ref|ZP_04985156.1| hypothetical protein FTAG_00079 [Francisella tularensis subsp. holarctica FSC022] gi|157122094|gb|EDO66234.1| hypothetical protein FTAG_00079 [Francisella tularensis subsp. holarctica FSC022] Length = 461 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECAESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|89256140|ref|YP_513502.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica LVS] gi|115314612|ref|YP_763335.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica OSU18] gi|156502164|ref|YP_001428229.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010595|ref|ZP_02275526.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica FSC200] gi|254367463|ref|ZP_04983489.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica 257] gi|290953289|ref|ZP_06557910.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica URFT1] gi|295313495|ref|ZP_06804091.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica URFT1] gi|89143971|emb|CAJ79193.1| Exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica LVS] gi|115129511|gb|ABI82698.1| exodeoxyribonuclease VII [Francisella tularensis subsp. holarctica OSU18] gi|134253279|gb|EBA52373.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. holarctica 257] gi|156252767|gb|ABU61273.1| exodeoxyribonuclease VII, large subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 461 Score = 194 bits (494), Expect = 2e-47, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECAESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D + TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKKFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|254374568|ref|ZP_04990049.1| hypothetical protein FTDG_00741 [Francisella novicida GA99-3548] gi|151572287|gb|EDN37941.1| hypothetical protein FTDG_00741 [Francisella novicida GA99-3548] Length = 461 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|118497758|ref|YP_898808.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. novicida U112] gi|194323730|ref|ZP_03057506.1| OB-fold nucleic acid binding domain protein [Francisella tularensis subsp. novicida FTE] gi|118423664|gb|ABK90054.1| exodeoxyribonuclease VII large subunit [Francisella novicida U112] gi|194322094|gb|EDX19576.1| OB-fold nucleic acid binding domain protein [Francisella tularensis subsp. novicida FTE] Length = 461 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADHIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTNIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNITPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|254373116|ref|ZP_04988605.1| exodeoxyribonuclease VII [Francisella tularensis subsp. novicida GA99-3549] gi|151570843|gb|EDN36497.1| exodeoxyribonuclease VII [Francisella novicida GA99-3549] Length = 461 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADHIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|237785190|ref|YP_002905895.1| exodeoxyribonuclease large subunit [Corynebacterium kroppenstedtii DSM 44385] gi|237758102|gb|ACR17352.1| exodeoxyribonuclease large subunit [Corynebacterium kroppenstedtii DSM 44385] Length = 424 Score = 194 bits (493), Expect = 3e-47, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 168/365 (46%), Gaps = 14/365 (3%) Query: 9 SLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDA-I 67 + + V L+ + + S L V V G+++ + + +L+D + + + Sbjct: 20 TSPEAPWPVRILNRKIGDWI-SKLGSVWVEGQLTQMKQTRY--WTFLTLRDVEAEMSIEL 76 Query: 68 IWKGTL-NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 I K + + G +V+GK + ++ I + P G G LL +E+ +K Sbjct: 77 IAKNHVITSLPTPLSHGDRVIVLGKPNYSVSRGQLKLSITDIRPVGIGELLARIEQLRKL 136 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDE 185 L EGL + + K P+P +P+ I +IT A RD++ R+P + + VQG Sbjct: 137 LAAEGLLAPERKKPLPVLPRRIGLITGRGSAAERDVISIAQERWPAVNIRTLNPPVQGAS 196 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 E+ A+ L+ P D+II+ARGGGS+EDL F+DE +VR ++ PIIS Sbjct: 197 AVPEVKEALTILDR------DPTVDVIIVARGGGSVEDLLPFSDESLVRHVSTLRTPIIS 250 Query: 246 AIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 AIGHETD + D ADLRA TPT AA+ V + + R + R + Y+ + Sbjct: 251 AIGHETDNPVLDDVADLRAATPTDAAKRVVIDMATELEGIRDCRQRGQQALFRWLDYERD 310 Query: 306 TLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 LN L + + + ++ + R + N+ +++ R H+ ++ + Sbjct: 311 RLNDLRQRPVMADPMTPINRHAENVARDASSIRRNITLLLERANSEIAHLRGQVSALGPS 370 Query: 364 HNIQK 368 + + Sbjct: 371 ATLAR 375 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 58/159 (36%), Gaps = 9/159 (5%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----- 409 +++ ++ + + + I ++ + +F + L+ LR++ Sbjct: 265 ADLRAATPTDAAKRVVIDMATELEGIRDCRQRGQQALFRWLDYERDRLNDLRQRPVMADP 324 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--- 466 I ++ + + I ++ ++ ++ ++ + + TL RGY+ +Q Sbjct: 325 MTPINRHAENVARDASSIRRNITLLLERANSEIAHLRGQVSALGPSATLARGYSIVQVQR 384 Query: 467 -DTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 + T +++ I DG A ++ +P Sbjct: 385 PGEESEVATSIDQTPPGSQLRIRLNDGSIVAATMSTSPA 423 >gi|55376498|ref|YP_134350.1| exodeoxyribonuclease VII large subunit [Haloarcula marismortui ATCC 43049] gi|55229223|gb|AAV44644.1| probable exodeoxyribonuclease VII large subunit [Haloarcula marismortui ATCC 43049] Length = 350 Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats. Identities = 85/290 (29%), Positives = 128/290 (44%), Gaps = 16/290 (5%) Query: 1 MNPFSQKNSLDHPE-----YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHA 53 M SVS+L+ + +VE L V GE++ +S Sbjct: 1 MADAPDTERQAVEPEAGDVLSVSQLNDRIASVVEDAPALDGVRCIGEVTDL--HQNSTAL 58 Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 YF+L D + + +IW K++ E+G E ++ G I + K + +I G Sbjct: 59 YFTLTDGDAELPCMIWANRYRKMDAELEDGTEVILEGDIDYWTEGGKIDLKPWEVIVVGD 118 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-L 172 G A+E+ + +L E G F D+ K P P+ + V+TS G DI I + P + Sbjct: 119 GDQAAAVERLRSELEERGWFDDEQKQRPPAFPERVGVVTSLRGDARYDIQSAIHEQDPTV 178 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 +++ VQG E P IA N + D II+ RGGGS +L FN E + Sbjct: 179 DILVKDATVQGSEAPTSIA------NGIHHLDRSEDVDSIIVGRGGGSDSNLQAFNTERV 232 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 AI ++ PI++AIGH D +AD AD+ A TPT A E + Sbjct: 233 AEAIFTANTPIVTAIGHTDDRLIADRVADMAAITPTAAGEYIAKSRNDFL 282 >gi|284033452|ref|YP_003383383.1| exodeoxyribonuclease VII large subunit [Kribbella flavida DSM 17836] gi|283812745|gb|ADB34584.1| exodeoxyribonuclease VII, large subunit [Kribbella flavida DSM 17836] Length = 406 Score = 194 bits (492), Expect = 4e-47, Method: Composition-based stats. Identities = 91/370 (24%), Positives = 159/370 (42%), Gaps = 13/370 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS- 62 + + S D P +V ++ + + + L V V G+++ + + +L+D + Sbjct: 1 MALETSPDAPA-AVRTIANGIAGWI-NQLGAVWVEGQLTDVSIGRGTTTVFGTLRDTDAD 58 Query: 63 -RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 + + ++ +G +V K F + + + G G LL +E Sbjct: 59 ISLRFTCNRRVFEAVDPPVTDGSRVVVNAKPNFFARRGTLALAVTEIRHVGIGELLARIE 118 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 + K+ L EGLF+ K +PF+P I +I A RD+L+ R+P + I Sbjct: 119 RLKQLLGAEGLFAAHRKKRLPFLPHTIGLICGRDSAAERDVLENAKRRWPAVAFRIEYAS 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG E+ A+ +L ++I++ARGGGS+EDL F+DE ++RA++ + Sbjct: 179 VQGPAAAGEVMTALRKL------DGDDSVEVIVIARGGGSLEDLLPFSDEGLLRAVSQAR 232 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGHE D L D ADLRA TPT AA+ VP + L R I + Sbjct: 233 TPVVSAIGHEPDSPLLDLVADLRASTPTDAAKRIVPDVREELDGVRLLRDRGLRAITSWL 292 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + L ++ L L + L L + R H + ++ Sbjct: 293 DREAHALAAIRSRPALAAPATDLQRRSDEIAALVDRNRRTLTHRLDRAGDDLAHRLASVR 352 Query: 359 SDFLIHNIQK 368 + +++ Sbjct: 353 ALSPKATLER 362 Score = 97.9 bits (242), Expect = 3e-18, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 60/157 (38%), Gaps = 5/157 (3%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK-- 410 ++ +++ ++ + E+ + + + LR I + L +R + Sbjct: 250 LVADLRASTPTDAAKRIVPDVREELDGVRLLRDRGLRAITSWLDREAHALAAIRSRPALA 309 Query: 411 ---NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + I L+ R L+H++ ++ +++ + K TL+RGY+ +Q Sbjct: 310 APATDLQRRSDEIAALVDRNRRTLTHRLDRAGDDLAHRLASVRALSPKATLERGYSVLQL 369 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 + + + ++ + DG+ + V +K Sbjct: 370 ADGTAVRELDQVSAGDLLHARVSDGRFDVEVTSKESK 406 >gi|308375361|ref|ZP_07668003.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu007] gi|308346558|gb|EFP35409.1| exodeoxyribonuclease VII large subunit xseA [Mycobacterium tuberculosis SUMu007] Length = 385 Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats. Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 11/336 (3%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRID--AIIWKGTLNKIEFLPEEGIEFLVIGKITTF 95 G+++ + + L+D + + + + EG++ +V GK + + Sbjct: 2 EGQLAQITMRPDAKTVFMVLRDPAADMSLTVTCSRDLVLSAPVKLAEGVQVVVCGKPSFY 61 Query: 96 PGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPT 155 G + + + + G G LL +++ ++ L EGLF + K PIP++P +I +IT Sbjct: 62 TGRGTFSLRLSEIRAVGIGELLARIDRLRRLLDAEGLFDPRLKRPIPYLPNMIGLITGRA 121 Query: 156 GAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL 214 A RD+ S R+P R + V VQG +I A L+E P D+I+L Sbjct: 122 SAAERDVTTVASARWPAARFAVRNVAVQGPNAVGQIVEA------LRELDRDPDVDVIVL 175 Query: 215 ARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMA 274 ARGGGS+EDL F+DE + RAIA P++SA+GHE D L D DLRA TPT AA+ Sbjct: 176 ARGGGSVEDLLPFSDETLCRAIAACRTPVVSAVGHEPDNPLCDLVVDLRAATPTDAAKKV 235 Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLP 332 VP Q + +L R + + + + L L + +S + R Sbjct: 236 VPDTAAEQRLIDDLRRRSAQALRNWVSREQRAVAQLRSRPVLADPMTMVSVRAEEVHRAR 295 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L NL +++ + H+ R+ + + + Sbjct: 296 STLRRNLTLMVAAETERIGHLAARLATLGPAATLAR 331 Score = 80.6 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 40/140 (28%), Gaps = 12/140 (8%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R +++ + + R + + + + + + + Sbjct: 241 AEQRLIDDLRRRSAQALRNWVSREQRAVAQLR---SRPVLADPMTMVSVRAEEVHRARST 297 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-----TNN----NFITQKR 477 + L+ + + + L + TL RGY +Q + Sbjct: 298 LRRNLTLMVAAETERIGHLAARLATLGPAATLARGYAIVQTVAQTGPEGGSEPQVLRSVH 357 Query: 478 NLATKTRILINFFDGQANAI 497 + T++ + DG A+ Sbjct: 358 DAPEGTKLRVRVADGALAAV 377 >gi|297626867|ref|YP_003688630.1| exodeoxyribonuclease VII large subunit [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922632|emb|CBL57209.1| Exodeoxyribonuclease VII large subunit [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 457 Score = 193 bits (491), Expect = 5e-47, Method: Composition-based stats. Identities = 108/356 (30%), Positives = 174/356 (48%), Gaps = 11/356 (3%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 +S + +K VE ++ + V ++ R + + +L+D S + A + T Sbjct: 52 LSTVVGWVKGWVER-MNTIWVEAQVIELRRRAGAYMHFLTLRDTSSEVSAQVTATTAVLD 110 Query: 77 EFLP-EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + P EG L + + +++ L +G G LL LEK K+KL EGLFS Sbjct: 111 QAGPLTEGTTVLAKVRPRVWNKTARLSFECFELRIAGEGQLLAELEKLKRKLQAEGLFSP 170 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 K P+P IP++I +IT A RD+L R+P R + VQG ++ A Sbjct: 171 ARKKPLPMIPRLIGLITGADSAAERDVLTNTQRRWPSARFRVRHALVQGPSSVADVTAA- 229 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 L E P+ D+I++ARGGGS+E+L F+DE +VRA+A +S P++SAIGHE D Sbjct: 230 -----LAELDADPQVDLIVIARGGGSLENLLPFSDEGLVRAVAAASTPVVSAIGHEPDTP 284 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313 + D ADLRA TPT AA+ VP + ++ L AR II + LN L+ Sbjct: 285 ILDLVADLRASTPTDAAKRIVPDAAEERHAVAQLVARARTAIIARVSNAQAELNQLVSRP 344 Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + LS +L+ + L+ ++ ++ + H + RI++ +++ Sbjct: 345 VLSDPSAALSGHTEQLEMMRFRLDTAIDRLLDHERTDVAHAVQRIRAMSPKATLER 400 Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 52/151 (34%), Gaps = 2/151 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + R + + + + E + ++ + + ++ + R Sbjct: 309 AEERHAVAQLVARARTAIIARVSNAQAELNQLVSR--PVLSDPSAALSGHTEQLEMMRFR 366 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ + + T V+ + +++ + K TL+RGY + D +N +T +++ Sbjct: 367 LDTAIDRLLDHERTDVAHAVQRIRAMSPKATLERGYAIVADADNASVTSVTQTEPGDQLM 426 Query: 487 INFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + DG+ V + P P Sbjct: 427 VFLSDGRLVVEVDDTLPGGSGPAGADDPPAR 457 >gi|93005919|ref|YP_580356.1| exodeoxyribonuclease VII large subunit [Psychrobacter cryohalolentis K5] gi|92393597|gb|ABE74872.1| Exodeoxyribonuclease VII large subunit [Psychrobacter cryohalolentis K5] Length = 514 Score = 193 bits (490), Expect = 7e-47, Method: Composition-based stats. Identities = 94/520 (18%), Positives = 183/520 (35%), Gaps = 68/520 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-- 61 +N+L+ +S+ + +++ +H V V+ EI GH YF L KD+ Sbjct: 36 ENNLEDTVLRLSDYLSAVDMVIKQTFNHRVWVKAEIRNLSSK--GGHYYFELAEKDDDGK 93 Query: 62 --SRIDAIIWKGTLNKI--EFLPEEGI----EFLVIGKITT-FPGSSKYQIIIESLIPS- 111 + +W+ ++ +F G+ + V+ K++ F + + IE + PS Sbjct: 94 VIASCRGNLWRFKAARVLAKFERATGMPLDRDLTVLLKVSAGFHAQYGFSLTIEDIDPSY 153 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G L + +L EGL + + P PF + + VI A + D + Sbjct: 154 TLGDLARQYAEMVDRLAGEGLLNLNQQLPTPFDIEQVLVIAPEKAAGLGDFQADANRLAS 213 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 QG+ P EI AI+ E PD++++ RGGG++ DL + N Sbjct: 214 TGACHFHYHNATFQGNHAPAEIRQAIISAQQQFENTYQRLPDLLVIIRGGGAVGDLAYLN 273 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A +P+ IGHE D + D A TP+ + Sbjct: 274 DYELAALVAEQPVPVWVGIGHERDKVILDEVAHTSFDTPSKVIAAIM------------- 320 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 A L ++ + ++Y++ + + L ++Q + ++ L+ +R Sbjct: 321 -AHLAQLVTQTLQYQMQIKQAAQRQLNTAEQQTARQLSQIQSQTIGQLTALQKDSAYAWR 379 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + R + ++ + + Sbjct: 380 SIQQSAH---------------------------------RQVKQAARQASELHIQTQAS 406 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 ++ T+ K I ++ + I+ LK+GY+ + D Sbjct: 407 AYQQLSLASTYSKNHQKIIMQSAQQQLIQAQRDSAHLRDIVLLHRPSRVLKQGYSMLTDE 466 Query: 469 -NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 + +T L + I I DG+A A +I+ K+ Sbjct: 467 QDQRILTSSNQLYPEQTIHIVLKDGKAKAQIIDIKMDKKP 506 >gi|256371969|ref|YP_003109793.1| Exodeoxyribonuclease VII [Acidimicrobium ferrooxidans DSM 10331] gi|256008553|gb|ACU54120.1| Exodeoxyribonuclease VII [Acidimicrobium ferrooxidans DSM 10331] Length = 529 Score = 193 bits (490), Expect = 7e-47, Method: Composition-based stats. Identities = 103/511 (20%), Positives = 187/511 (36%), Gaps = 44/511 (8%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN---HSRIDAIIWKG 71 VSEL + + +L V VRG + + GH YF L D+ +R+ A IW Sbjct: 5 LGVSELIGRVNDAL-GSLGLVTVRGVVESAKASQR-GHLYFDLIDDGDRQARVSAAIWAS 62 Query: 72 TLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 IE +G +V G++ + + I+ + A +R Sbjct: 63 RRAGIETALRRAGLGSLGDGALVVVSGRLQVYAPRGSMSLSIDRVEIEAMLDARAATRQR 122 Query: 124 K-KKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKV 181 ++L EG+ + P+P + IA++ S G V D+ + ++ F V ++ +V Sbjct: 123 HLRQLAAEGIVDANRRVPVPAVALRIALVASRDGVVREDVRRALADTGFAFTVRLYHTEV 182 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 A +Q+ +PD++++ARGGGS DL F+D + RA+A + + Sbjct: 183 STRA-------ASVQIRRALAAAIADQPDLVLVARGGGSEGDLAAFDDLDLARAVATAPV 235 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS---------------SLI 286 PI AIGH D L Y A+ P AA+ V E + L Sbjct: 236 PIWVAIGHAVDQPLLAYVANCAFDVPQSAAKALVARVEDFREGLATEIATAIHHARARLD 295 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 I + + L + ++LP+ + + RL R +I R Sbjct: 296 RGWLHTRQIAHAIEAHSQRRLAAAHRSLPSPSVLDARTDQRLTN-ERHTLPATSVIDARV 354 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQHLRYIFLEKKEKIAILHM 404 + + +I + R + +Q H ++ + E A Sbjct: 355 RARLARSRAVLTAARSARDIVRLRVRLEVRQLVDHRRELAAATSAIATAHRTELHARQRR 414 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTLKRGYT 463 L R + + + + + + + + R ++ + L+RG+ Sbjct: 415 LTRAAARRRAHHDAALAAVRRHLTAASYRRARRDRRGLELLARRIEGLASP---LERGFA 471 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA 494 I D ++ + +AT + +F DG A Sbjct: 472 MITDPTGTWLRRADAIATHAIVHAHFVDGVA 502 >gi|208779823|ref|ZP_03247167.1| OB-fold nucleic acid binding domain protein [Francisella novicida FTG] gi|208744278|gb|EDZ90578.1| OB-fold nucleic acid binding domain protein [Francisella novicida FTG] Length = 461 Score = 193 bits (489), Expect = 1e-46, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 187/506 (36%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADHIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECAESVSAAFAKI-----ETKAFDYDAIVVIRGGGSQADLDWFNNIAPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQINQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLTK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|187931553|ref|YP_001891537.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. mediasiatica FSC147] gi|187712462|gb|ACD30759.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 461 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS D+ FN+ Sbjct: 183 DIYEAKMQGAECAESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADIDWFNNITPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|124024875|ref|YP_001013991.1| exonuclease VII, large subunit [Prochlorococcus marinus str. NATL1A] gi|123959943|gb|ABM74726.1| Exonuclease VII, large subunit [Prochlorococcus marinus str. NATL1A] Length = 386 Score = 192 bits (487), Expect = 1e-46, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 163/354 (46%), Gaps = 14/354 (3%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKD 59 M YSV EL+ + ++ V +S + GH + +L D Sbjct: 1 MTDLKNAKQ-SLNTYSVKELNESIGLLLSRGFAPKFIVEATVS--KSQIKKGHLWLTLTD 57 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + +DA+ W T+ ++FLP++ ++IGK+ + ++ + + + PS T+L Sbjct: 58 GKASVDAVAWSSTIKSLKFLPKQDDGVVIIGKLNFWESQARVSVQVFDIRPS-ISTVLRK 116 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFP 178 E K KL +EGL D + +P P I ++TS + + D+L+ R+PL ++ I P Sbjct: 117 FEIVKSKLFKEGLIDDSLRKKLPKYPHSIGILTSVPSSALADMLRTAKERWPLTKLQIIP 176 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 + VQGD K L+ K + + + +I+ARGGGS EDL F+ E+I R IA Sbjct: 177 IPVQGDNANK------LKSILSKLKKNKLKLEALIIARGGGSREDLMLFDSEIIAREIAT 230 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 IP+I+ IGHE D T+AD +D R+ TPT A +P +E ++ + + L + Sbjct: 231 FPIPVITGIGHEDDLTVADLVSDHRSATPTAAIVDLLPSREIEKNKFLQNKKLLKYYLKL 290 Query: 299 LIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 + +L + + + R R++ + L + ++ Sbjct: 291 FFQNAKKSLITKKSIFQSYSPRLLIKNKRTRINYMYDILNALSPRKLLKRGFAL 344 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 6/121 (4%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + + KK L + + K + + + R+ IK+ Sbjct: 266 LLPSREIEKNKFLQNKKLLKYYLKLFFQNAKKSLITKKSIFQSYSPRL------LIKNKR 319 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 T ++ IL + + + LKRG+ I D + N I +N+ ++++ F DG+ A V Sbjct: 320 TRINYMYDILNALSPRKLLKRGFALITDESGNSIYSVKNIKENDKLIVQFCDGKITAEVD 379 Query: 500 N 500 + Sbjct: 380 S 380 >gi|198275700|ref|ZP_03208231.1| hypothetical protein BACPLE_01875 [Bacteroides plebeius DSM 17135] gi|198271329|gb|EDY95599.1| hypothetical protein BACPLE_01875 [Bacteroides plebeius DSM 17135] Length = 434 Score = 192 bits (487), Expect = 2e-46, Method: Composition-based stats. Identities = 80/512 (15%), Positives = 183/512 (35%), Gaps = 98/512 (19%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61 +++ S+ EL+ ++ + S L V+ E+S R + SGH Y F KD Sbjct: 1 MENKPLSLLELNSLVRRSITSCLPDEYWVQAELSDVRVNY-SGHCYLEFVQKDATGNALL 59 Query: 62 SRIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ IIW ++ F E G + LV + Y + + ++ P+ Sbjct: 60 AKARGIIWANVFTRLRSYFERETGQAFVSGLKVLVKVTVDFHELYG-YSLTVVNIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G ++ ++ ++L EEG+ + + +P + + IAVI+S T A D ++ Sbjct: 119 LGDMVRRRKEILRQLDEEGILTLNKELELPVLTQRIAVISSATAAGYGDFCNQLLHNSFG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +F +QG++ + I A+ ++N+ ++ D++++ RGGG+ DL F+ Sbjct: 179 FVFYPRLFQAIMQGEQVEQSIIQALDRINSTRDNW-----DVVVIIRGGGATSDLSGFDT 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 D AA+ + + + + + Sbjct: 234 Y--------------------------DLAANCAQFPLPIITGIGHERDDTVLDMISHTR 267 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + ++ ++ R L E + + + Sbjct: 268 --------------------VKTPTAAAEFLINHVRQTAQELETYEEVIYQEVPRLLQQE 307 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + I ++ R++ +Q+ + +K + L++ ++ ++ Sbjct: 308 KQRLDSFITRIPGQVQMRLQRENF--RQEKFQNRMKTAWQSRLLQENYRLQLMP------ 359 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 R+ L ++++ + + + + S + + LK+GY+ + Sbjct: 360 ----------------RLLSALQNRVQRETHRLELLAQRVDSASPEKLLKKGYSLTLL-D 402 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINK 501 +T L + G+ + VINK Sbjct: 403 GKVVTDASQLKPGDEVETRLAKGKFRSKVINK 434 >gi|326565384|gb|EGE15561.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis 103P14B1] gi|326573373|gb|EGE23341.1| exodeoxyribonuclease VII large subunit [Moraxella catarrhalis 101P30B1] Length = 536 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 106/522 (20%), Positives = 182/522 (34%), Gaps = 79/522 (15%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH----- 61 N+L S+S+ +K +++ + H V VR EI GH YF L + Sbjct: 68 NNLADAHLSLSDYLTAVKMVIDDSFDHEVWVRAEIRAMNTK--GGHYYFELAETDDVDQI 125 Query: 62 -SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP-S 111 + A +W+ + + GI LV + + + I + P Sbjct: 126 TASCRATLWRFRAKTVMSKFTKMTGQSLQAGILVLVKCSASFHANYG-FSLNISDVDPNY 184 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--- 168 G + A + KK+L EEGL K+ IPF + + VI A + D Sbjct: 185 TLGEIAAAYTQMKKRLSEEGLLHLNKKHAIPFDIRHVIVIAPEKAAGLGDFRAEADRLAL 244 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 + QG+ P EI AI + + PD++++ RGGG++ DL + N Sbjct: 245 AGACQFHYHYATFQGNHAPNEIRLAISEGMNNFKNTYDTLPDLLVIIRGGGAVGDLAYLN 304 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A IP+ IGHE D + D A TP+ A ++S L+ + Sbjct: 305 DFELAALVAECPIPVWVGIGHERDSVILDEVAHSSFDTPSKAIL-------GIESHLVKM 357 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + RL K L + + S + Sbjct: 358 TRQAVATMDRLTKMTNTHLTMAQANSQRQIEKIQRSSLHAVNMA---------------- 401 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 K+ ++ Q+ F +EK A+ +L + Sbjct: 402 ---------------------------KKDNLYQLSHIKSTAKFRHHQEKSALTALLAQT 434 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF----AYKNTLKRGYTS 464 K+ + + ++ + + + + R LQS LK+GYT Sbjct: 435 QKSSLAIISQAKHTTKIHLDQ--HNILFDYLSKLKKDCRHLQSLILIQHPSRMLKKGYTL 492 Query: 465 IQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 I + N I + L + I F DG A+A++ + + K Sbjct: 493 IHNAQTNESIHSTKTLQQNWSVKITFKDGTASAVIKDISTHK 534 >gi|332978574|gb|EGK15280.1| exodeoxyribonuclease VII [Psychrobacter sp. 1501(2011)] Length = 503 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 88/510 (17%), Positives = 181/510 (35%), Gaps = 67/510 (13%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-- 61 N L++ +S+ ++ +++ H V V+ EI GH YF L KD+ Sbjct: 34 DNELENTVLRLSDYLAAVELVIKETFRHSVWVKAEIRNLSSK--GGHYYFELAEKDDDGK 91 Query: 62 --SRIDAIIWKGTLNKI--EFLPEEGIE----FLVIGKIT-TFPGSSKYQIIIESLIPS- 111 + +W+ +++ +F G++ V+ +T +F + + I + PS Sbjct: 92 VIASCRGNLWRFKASRVLTKFERATGMKLERDVTVLLNVTASFHPLYGFSLAINDIDPSY 151 Query: 112 GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISC 168 G L ++L EGL + + P PF + + VI A + D ++ Sbjct: 152 TLGDLARQYAAMLERLSGEGLLNLNKQLPAPFDIEHVLVIAPEKAAGLGDFRADADKLES 211 Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 QG+ PKEI +AI + + PD++++ RGGG++ DL + N Sbjct: 212 TNACHFHYHYATFQGNHAPKEIRHAITKGMLTFRKQYERDPDVMVIIRGGGAVGDLAYLN 271 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 D + +A +P+ IGHE D + D A TP+ V L Sbjct: 272 DYELAALVAEQPVPVWVGIGHERDSVILDEVAHTSFDTPSKVIAGIVNHLASLMQRTQGY 331 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + ++ + Sbjct: 332 ADAIQH-------------------------LSQQQLTQAAMATERQFSAIQSSSTHNLQ 366 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 H+ H+ +R + H + R+ + + ++++I + + Sbjct: 367 HWQHLSDRHFTSIEQHAKFQLREVSMTTESNMQRIRQMSYNQ---------------LAR 411 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 T + I LH K ++ ++ +++ V I L +GY +++ Sbjct: 412 TTDSIESLHHSTKYNSQKLLSEVAKQVRYYQQVVLIQ-------NPARLLDQGYAFVKNA 464 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIV 498 + ++ ++ + + DG+ A+V Sbjct: 465 EDTYLNSVGSIDKGDFVTVAMSDGRFKAVV 494 >gi|134302172|ref|YP_001122141.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|134049949|gb|ABO47020.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 461 Score = 191 bits (486), Expect = 2e-46, Method: Composition-based stats. Identities = 96/506 (18%), Positives = 188/506 (37%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIEILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECSESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|241668735|ref|ZP_04756313.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877266|ref|ZP_05249976.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843287|gb|EET21701.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 461 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 94/506 (18%), Positives = 184/506 (36%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + V E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWVVAELSEWR---RSGKHYYGELIEHDGVSKFPIAKIRC 63 Query: 67 IIWKGTLNKI--EF------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F + ++ L + + S + I + P+ G Sbjct: 64 NCWANKVEHIHSKFSQATGETLKTDMKVLFRVSVN-YHTSFGLSLNIIDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + + L + G+ +P +AVITS T A D ++ Sbjct: 123 ARKIEILQNLSKNGILEKNKVLNMPDDFTNVAVITSMTAAGKGDFFEEADKLQDLNLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC K ++ A ++ T+ + + D+I+L RGGGS DL FN+ ++ Sbjct: 183 DIYEAKMQGAECAKSVSTAFAKIATIAD-----KYDVIVLIRGGGSQADLDWFNNILLAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSEIPVLVGIGHERDSTVLDEICTKRFDTPSKIINYIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ IN + + + ++++LD L + +E +++ + +H Sbjct: 279 --NTIVDNAINAKYNYESIVRITKSLAKQNKHQLDNLYHNFKTRIEHYLYQMSQSVDH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + ++ L K + + +K I Sbjct: 335 ------------------------NYKESTSIARGVSKLYDKTVNTMYENILLSSKRLIR 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 +I + + +K + + + + S + + TLKRG++ + + +IT Sbjct: 371 SYGNNIYNSYNQSTNTARNILKYYNQTSESLYKQILSVSIEPTLKRGFSLTKTIDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + + I + DG V Sbjct: 431 TQKQAQAYSDLEIVYADGHIQVEVKE 456 >gi|319776940|ref|YP_004136591.1| exodeoxyribonuclease vii, large subunit [Mycoplasma fermentans M64] gi|318038015|gb|ADV34214.1| Exodeoxyribonuclease VII, large subunit [Mycoplasma fermentans M64] Length = 458 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 115/502 (22%), Positives = 193/502 (38%), Gaps = 65/502 (12%) Query: 12 HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 S+ +L+ +K +++N ++ IS + HAY ++ D +A IW Sbjct: 13 SNVMSLGKLNNIIKDNLKNNFWQTYWIKASISKLSIKN---HAYLNIVDGEYSSNAAIWA 69 Query: 71 GTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKR 123 + I + + + I+ + ++ IE + EK Sbjct: 70 SKIPNIGIDITSNNKDLYSHAYFMNVSISPYSLNNSVSYSIEQIIDLDTYSKEKIEKEKL 129 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182 KK L +G F K PIP + IAVI + +G +RD+ + RFP+ + +F VQ Sbjct: 130 KKLYLSKGYFDPNRKRPIPKYCEYIAVIAAESGQAVRDVYTTVLSRFPIANLKLFNSSVQ 189 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + +I I N D+II+ARGGGS DL FN E IV AI S IP Sbjct: 190 GQQALIDIPKQIANANK-------ENFDVIIIARGGGSTVDLEIFNQEAIVNAIVESKIP 242 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I++AIGH D + +D AD TPTGAA++ VP KE + S L N AR N I ++ Sbjct: 243 IVTAIGHTDDISFSDLIADAYGNTPTGAAKLVVPDKEEILSLLRNYRARNQNYINKM--- 299 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + + +I Sbjct: 300 ----------------------------------------LLDSQNKLKKLAQKIYEFKP 319 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 I++ + + ++ I+ L+ + + KE ++ ++E +I + Sbjct: 320 ELIIEQYENKVNKFKEFIKNHKILLLQKLETKIKEFKELVKSIKELFLQKI---QAKFEM 376 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 TR + H + + SI + L++G+ + + NN I + + Sbjct: 377 AKTRFKNQALHCFNNQLATFSIVKEKVIQRNPLKILEKGFAKVTNENNQIIKTIKQVKVD 436 Query: 483 TRILINFFDGQANAIVINKAPP 504 ++ I DG A +V Sbjct: 437 KKLYIELKDGIAEVVVQKVNKK 458 >gi|239918116|ref|YP_002957674.1| Exodeoxyribonuclease VII large subunit [Micrococcus luteus NCTC 2665] gi|281415699|ref|ZP_06247441.1| exodeoxyribonuclease VII large subunit [Micrococcus luteus NCTC 2665] gi|239839323|gb|ACS31120.1| Exodeoxyribonuclease VII large subunit [Micrococcus luteus NCTC 2665] Length = 437 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 15/382 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + LS +LK +E + G++ ++ G+ Y +++D Sbjct: 20 PARAGETSAERPWPLRRLSENLKAHIERA-PATWIEGQLIEFKNNR--GNVYMTMRDLEE 76 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + W+ ++ ++G + K + + + + ++ + P G G LL + Sbjct: 77 EVSLSLTAWRNVAMTLDGTVQQGSRVVARVKPNFWLKAGRLSMNVQEMRPVGLGDLLARV 136 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E ++ L EEGL S K P+P +P I +IT +D+L+ R+P I V Sbjct: 137 ELLRRALAEEGLTSPARKRPLPLLPHRIGLITGRDSDAKKDVLRNTLLRWPAAEFEIREV 196 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW-HFNDEMIVRAIAN 238 VQG E P+++A A+ + P D+I++ARGGG++E++ F+DE +VRA+A Sbjct: 197 AVQGAEAPRQVAAALAE------LDADPAVDVIVIARGGGALEEVVLPFSDETLVRAVAA 250 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SAIGHE D + D ADLRA TPT AA+ VP + L + RL + R Sbjct: 251 ARTPVVSAIGHEADRPVLDDVADLRASTPTDAAKRIVPDAAQEAAGLADARLRLAAAVER 310 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + L +L L + + DR L + R+ + R Sbjct: 311 RVRAEAEGLATLRSRPVLARPHLMVDARQEETDRWRERGRSALGHRLVREEDALTQLRAR 370 Query: 357 IKSDFLIHNIQKNRQHILEKQQ 378 +++ + + + Q Sbjct: 371 VRALSPQRTLDRGYAVVQHAGQ 392 Score = 92.5 bits (228), Expect = 1e-16, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 38/116 (32%), Gaps = 1/116 (0%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + + + R L H++ +++ +++ + + TL R Sbjct: 323 RSRPVLARPHLMVDARQEETDRWRERGRSALGHRLVREEDALTQLRARVRALSPQRTLDR 382 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516 GY +Q + +A R+ I G+ A V+ P+ + Sbjct: 383 GYAVVQHA-GQVVRDADQVAPDDRLDILVAAGRITADVVATHRTTPTPSHERTRQA 437 >gi|311111872|ref|YP_003983094.1| exodeoxyribonuclease VII large subunit [Rothia dentocariosa ATCC 17931] gi|310943366|gb|ADP39660.1| exodeoxyribonuclease VII large subunit [Rothia dentocariosa ATCC 17931] Length = 452 Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 172/371 (46%), Gaps = 15/371 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + ++ L+ ++K+ ++ + V +++ G G+ + LKD Sbjct: 44 PAKSQETTPQNPWPLALLAQNMKNYIDKV-PQLWVEAQVASLNGR--GGNVFIELKDLQE 100 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++ + + G + + K + + + + +I + G+G L L Sbjct: 101 DFSFTLALFGQAGRGLGSDVKVGARVVTLAKPSLW-KNGRLSLIGRRIYAVGTGNLHEQL 159 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 + ++KL EGLF+D K P+P +P + +IT +D+++ S R+P ++ + V Sbjct: 160 QILREKLAAEGLFADARKKPLPLLPHRVGLITGRDSDAEKDVIRNASLRWPGVQFEVRNV 219 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG+ A + L E P D+I++ARGGGS EDL F+DE +VRA+A + Sbjct: 220 KVQGEGS------ASEVMAALSELDAHPEVDVIVIARGGGSFEDLLSFSDEALVRAVAAA 273 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D + D AD+RA TPT A + VP + + AR + ++ Sbjct: 274 QTPVVSAIGHEADSPILDAVADVRASTPTDAGKRIVPDVAEELAVIREARARADRAVLGY 333 Query: 300 IKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + Y+ L + L + RL ++E + R+ +H I R+ Sbjct: 334 LNYQEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARV 393 Query: 358 KSDFLIHNIQK 368 ++ + +++ Sbjct: 394 RALSPVETLKR 404 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 45/109 (41%) Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 E+ + + Q + + + I +L R + +++ ++S T +++ Sbjct: 337 QEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARVRAL 396 Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + TLKRGYT +Q + + + L+ ++ + G A V+ Sbjct: 397 SPVETLKRGYTIVQRADGDLVRDATALSAHDKLTMRAAVGGAEVSVVKT 445 >gi|212696079|ref|ZP_03304207.1| hypothetical protein ANHYDRO_00615 [Anaerococcus hydrogenalis DSM 7454] gi|212676708|gb|EEB36315.1| hypothetical protein ANHYDRO_00615 [Anaerococcus hydrogenalis DSM 7454] Length = 393 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 166/371 (44%), Gaps = 15/371 (4%) Query: 15 YSVSELSYHLKH--IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV + + ++K ++ +V ++GEI+ Y+ H+ H YFSLK++ ID I+ Sbjct: 4 LSVKQFNQYIKTSLKLDPLFQNVSIKGEIANYKISHN--HIYFSLKEDEEIIDCAIYYYE 61 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + G E +V G + SK I + ++ G K K+ ++G Sbjct: 62 DKDLGVY-NNGDEVIVEGNLIYNSFFSKISIAVNNIESKGLSEDYIKFLKLKEDFYKKGY 120 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F + K I PK I +ITS A I D + I+ + + ++PVKVQG EI Sbjct: 121 FDQERKKSISSYPKNIGLITSDKSAAIVDFISVINKEISDINIYLYPVKVQGLSAKSEII 180 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 NAI L+ + D I++ RGGGS EDL FN++ +V I + PIISAIGH+ Sbjct: 181 NAIDILDE-------KKLDAIVITRGGGSKEDLKVFNEKDLVEKIYKAKSPIISAIGHKI 233 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK--INTLNS 309 D +L D +D+ TPT A V + ++ + +L + + R I K Sbjct: 234 DLSLTDLVSDVSLQTPTEAGSYLVRNYKKIRDKINDLFINIRKTLNRNIDLKELKLRNLG 293 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + L LD L + +E I +K + + R+ S I I+K Sbjct: 294 DKLELYKIENLLEKKSNDLDLLFDKFNKTIENDIRQKENKISLLKYRLNSINSILEIKKK 353 Query: 370 RQHILEKQQHI 380 +I + + + Sbjct: 354 SIYIKDLEDKL 364 Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 58/139 (41%), Gaps = 6/139 (4%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L+ N +K R I + +I + + +++ L+ + L + + +N + + Sbjct: 256 LVRNYKKIRDKINDLFINIRKTLNRNIDLKELKLRNLGDKLELYK--IENLLEKKSNDLD 313 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTLKRGYTS-IQDTNNNFITQKRNL 479 L + + + I+ +S+ L S + K+ + I+D + I + +L Sbjct: 314 LLFDKFNKTIENDIRQKENKISLLKYRLNSINSILEIKKK--SIYIKDLEDKLIYSRNSL 371 Query: 480 ATKTRILINFFDGQANAIV 498 K ++ I F DG+ A + Sbjct: 372 KNKDKVKIVFSDGEVKAEI 390 >gi|212690703|ref|ZP_03298831.1| hypothetical protein BACDOR_00190 [Bacteroides dorei DSM 17855] gi|237725106|ref|ZP_04555587.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D4] gi|212666803|gb|EEB27375.1| hypothetical protein BACDOR_00190 [Bacteroides dorei DSM 17855] gi|229436372|gb|EEO46449.1| exodeoxyribonuclease VII large subunit [Bacteroides dorei 5_1_36/D4] Length = 435 Score = 190 bits (483), Expect = 4e-46, Method: Composition-based stats. Identities = 91/433 (21%), Positives = 180/433 (41%), Gaps = 31/433 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61 ++ S+ EL+ +K + + L V+ E+S R + SGH Y F K+ Sbjct: 1 MEEHPLSLYELNALVKRSIHACLPDTYWVQAELSDVRSNY-SGHCYLEFVQKEPRGNNLI 59 Query: 62 SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ IW ++ EE GI+ +V + Y + ++ + P+ Sbjct: 60 AKARGTIWSNVYRLLKPYFEEETGQAFVAGIKVMVKVTVEFHELYG-YSLTVQDIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G + + K+L EEG+ + + IP + + IAVI+S T A D ++ Sbjct: 119 LGDMARRRREILKQLEEEGVLTLNKELEIPLLAQRIAVISSATAAGYGDFCNQLEQNPYG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QG+ + + A+ ++ ++ D++++ RGGG+ DL F+ Sbjct: 179 FVFYPRLFPAIMQGERVEQSVITALDAIHACRDDW-----DVVVIIRGGGATSDLSGFDT 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + A IPII+ IGHE D T+ D + R TPT AAE + L + Sbjct: 234 YELATNCAQFPIPIITGIGHERDDTVLDCVSHTRVKTPTAAAEYLINHLHDTAKVLEDYA 293 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + I ++ + LN +++ +P L YR +R+ + LE L+ + ++ Sbjct: 294 SAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKETH 353 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLR 406 + ++ + K + + +Q ++ ++ R + K A++ Sbjct: 354 CLKMVETQLGIVS-QRRLVKEKHRLQLLEQELKAASPENLLKRGYSITLKNGKAVIDASA 412 Query: 407 EQTKNRIFYLHTH 419 Q + + Sbjct: 413 LQPGDELTTRFAK 425 >gi|308189747|ref|YP_003922678.1| exodeoxyribonuclease VII [Mycoplasma fermentans JER] gi|307624489|gb|ADN68794.1| exodeoxyribonuclease VII [Mycoplasma fermentans JER] Length = 458 Score = 190 bits (482), Expect = 5e-46, Method: Composition-based stats. Identities = 116/502 (23%), Positives = 193/502 (38%), Gaps = 65/502 (12%) Query: 12 HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 S+ +L+ +K +++N ++ IS + HAY ++ D +A IW Sbjct: 13 SNVMSLGKLNNIIKDNLKNNFWQTYWIKASISKLSIKN---HAYLNIVDGEYSSNAAIWA 69 Query: 71 GTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKR 123 + I + + + I+ + ++ IE + EK Sbjct: 70 SKIPNIGIDITSNNKDLYSHAYFMNVSISPYSLNNSVSYSIEQIIDLDTYSKEKIEKEKL 129 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182 KK L +G F K PIP + IAVI + +G +RD+ + RFP+ + +F VQ Sbjct: 130 KKLYLSKGYFDPNRKRPIPKYCEYIAVIAAESGQAVRDVYTTVLSRFPIANLKLFNSSVQ 189 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + +I I N D+II+ARGGGS DL FN E IV AIA S IP Sbjct: 190 GQQALIDIPKQIANANK-------ENFDVIIIARGGGSTVDLEIFNQEAIVNAIAESKIP 242 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I++AIGH D + +D AD TPTGAA++ VP KE + S L N AR N I ++ Sbjct: 243 IVTAIGHTDDISFSDLIADAYGNTPTGAAKLVVPDKEEILSLLRNYRARNQNYINKM--- 299 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + + +I Sbjct: 300 ----------------------------------------LLDSQNKLKKLAQKIYEFKP 319 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 I++ + + ++ I+ L+ + + KE ++ +E +I + Sbjct: 320 ELIIEQYENKVNKFKEFIKNHKILLLQKLETKIKEFKELVKSSKELFLQKI---QAKFEM 376 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 TR + H + + SI + L++G+ + + NN I + + Sbjct: 377 TKTRFKNQALHCFNNQLATFSIVKEKVIQRNPLKILEKGFAKVTNENNQIIKTIKQVKVD 436 Query: 483 TRILINFFDGQANAIVINKAPP 504 ++ I DG A +V Sbjct: 437 KKLYIELKDGIAEVVVQKVNKK 458 >gi|237709742|ref|ZP_04540223.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 9_1_42FAA] gi|265754372|ref|ZP_06089561.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_33FAA] gi|229456378|gb|EEO62099.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 9_1_42FAA] gi|263235081|gb|EEZ20636.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_33FAA] Length = 435 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 91/433 (21%), Positives = 180/433 (41%), Gaps = 31/433 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61 ++ S+ EL+ +K + + L V+ E+S R + SGH Y F K+ Sbjct: 1 MEEHPLSLYELNALVKRSIHACLPDTYWVQAELSDVRSNY-SGHCYLEFVQKEPRGNNLI 59 Query: 62 SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ IW ++ EE GI+ +V + Y + ++ + P+ Sbjct: 60 AKARGTIWSNVYRLLKPYFEEETGQAFVAGIKVMVKVTVEFHELYG-YSLTVQDIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G + + K+L EEG+ + + IP + + IAVI+S T A D ++ Sbjct: 119 LGDMARRRREILKQLEEEGVLTLNKELEIPLLAQRIAVISSATAAGYGDFCNQLEQNPYG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QG+ + + A+ ++ ++ D++++ RGGG+ DL F+ Sbjct: 179 FVFYPRLFPAIMQGERVEQSVITALDAIHACRDDW-----DVVVIIRGGGATSDLSGFDT 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + A IPII+ IGHE D T+ D + R TPT AAE + L + Sbjct: 234 YELAANCAQFPIPIITGIGHERDDTVLDCVSHTRVKTPTAAAEYLINHLHDTAKVLEDYA 293 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + I ++ + LN +++ +P L YR +R+ + LE L+ + ++ Sbjct: 294 SAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKETH 353 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLR 406 + ++ + K + + +Q ++ ++ R + K A++ Sbjct: 354 CLKMVETQLGIVS-QRRLVKEKHRLQLLEQELKAASPENLLKRGYSITLKNGKAVIDASA 412 Query: 407 EQTKNRIFYLHTH 419 Q + + Sbjct: 413 LQPGDELTTRFAK 425 Score = 98.7 bits (244), Expect = 2e-18, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 55/145 (37%), Gaps = 2/145 (1%) Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYL 416 + ++H I + + + + + R E+ + + E ++R+ Sbjct: 292 YASAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKE 351 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 +K + T++ + ++ + + + L++ + +N LKRGY+ N + Sbjct: 352 THCLKMVETQLGIVSQRRLVKEKHRLQLLEQELKAASPENLLKRGYSITL-KNGKAVIDA 410 Query: 477 RNLATKTRILINFFDGQANAIVINK 501 L + F G+ +IV K Sbjct: 411 SALQPGDELTTRFAKGEIKSIVTKK 435 >gi|307699941|ref|ZP_07636992.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris FB024-16] gi|307614979|gb|EFN94197.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris FB024-16] Length = 428 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 13/383 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + D+P + ++ L + ++ ++ V ++ Y + ++F KD + Sbjct: 17 PRALQTTRDNP-WPLALLLEKMDEYIDR-MAPTWVEAQVIEYNQRPGNRMSFFRAKDLEA 74 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + + + G ++ K + + ++ + P+G G +L L Sbjct: 75 DMSMQVKAFGNVIAAAGPAMQAGARVVMQVKPDFYTKTGDLSLMAAEIHPAGMGGMLEEL 134 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ K++L EGLFS +HK +PF+P+ + +I D+ + + R+PL + V Sbjct: 135 ERLKQRLAAEGLFSREHKKELPFLPRRVGLICGHKARAQADVKENVWRRWPLMEFEVREV 194 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ CP+E+A AI E T D+I++ RGGG+ EDL F+DE +VRA + Sbjct: 195 AVQGENCPREVAAAIA------ELDTVADIDVIVVTRGGGAFEDLLGFSDEGVVRAAFAA 248 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SA+GHE D L D+ AD RA TPT AA+ VP + ++ + Sbjct: 249 QTPIVSAVGHEEDTPLLDFVADFRASTPTDAAKRIVPDCVAESELMERGRQKMRQAVGTR 308 Query: 300 IKY--KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + N L R + + + I+ + + Sbjct: 309 VSAGLEWLQAMRSRPVMQNPGAALEQRRGDIAHGVEIMRARIAEILAVFRQDLAADRATL 368 Query: 358 KSDFLIHNIQKNRQHILEKQQHI 380 + +++ + + + Sbjct: 369 TAISPRATLERGYAVLRTPGRAL 391 Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 2/132 (1%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 +Q + Q V + + + + + + I + + ++ + Sbjct: 298 RQKMRQAVGTRVSAGLEWLQAMRSR--PVMQNPGAALEQRRGDIAHGVEIMRARIAEILA 355 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 ++ L + + + TL+RGY ++ IT + + G A Sbjct: 356 VFRQDLAADRATLTAISPRATLERGYAVLRTPGRALITDATTVKKGDLLEAVLARGSLVA 415 Query: 497 IVINKAPPKEQP 508 V+ P Sbjct: 416 SVVGANPGAGTA 427 >gi|300741968|ref|ZP_07071989.1| exodeoxyribonuclease VII, large subunit [Rothia dentocariosa M567] gi|300381153|gb|EFJ77715.1| exodeoxyribonuclease VII, large subunit [Rothia dentocariosa M567] Length = 436 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 92/371 (24%), Positives = 176/371 (47%), Gaps = 15/371 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + ++ L+ ++K+ ++ + V +++ G G+ + LKD Sbjct: 28 PAKSQETTPQNPWPLALLAQNMKNYIDKV-PQLWVEAQVASLNGR--GGNVFIELKDLQE 84 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++ + + G + + K + + + + +I + G+G L L Sbjct: 85 DFSFTLALFGQAGRGLGSDVKVGARVVTLAKPSLW-KNGRLSLIGRRIYAVGTGNLHEQL 143 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 + ++KL EGLF+D K P+P +P + +IT +D+++ S R+P ++ + V Sbjct: 144 QILREKLAAEGLFADARKKPLPLLPHRVGLITGRDSDAEKDVIRNASLRWPGVQFEVRNV 203 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 KVQG+ E+ A+ +L+ L P D+I++ARGGGS EDL F+DE +VRA+A + Sbjct: 204 KVQGEGSASEVMAALSELDAL------PEVDVIVIARGGGSFEDLLSFSDEALVRAVAAA 257 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D + D AD+RA TPT A + VP + + AR + ++ Sbjct: 258 QTPVVSAIGHEADSPILDAVADVRASTPTDAGKRIVPDVAEELAVIREARARADRAVLGY 317 Query: 300 IKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + Y+ L + L + RL ++E + R+ +H I R+ Sbjct: 318 LNYQEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARV 377 Query: 358 KSDFLIHNIQK 368 ++ + +++ Sbjct: 378 RALSPVETLKR 388 Score = 81.3 bits (199), Expect = 4e-13, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 45/109 (41%) Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 E+ + + Q + + + I +L R + +++ ++S T +++ Sbjct: 321 QEQYIRQLHERPVLTQPETDLGWRSEDIFRLRERAARSVEYRVARERDAISHTIARVRAL 380 Query: 453 AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + TLKRGYT +Q + + + L+ ++ + G A V+ Sbjct: 381 SPVETLKRGYTIVQRADGDLVRDATTLSAHDKLTMRAAVGGAEVSVVKT 429 >gi|327403514|ref|YP_004344352.1| Exonuclease VII large subunit [Fluviicola taffensis DSM 16823] gi|327319022|gb|AEA43514.1| Exonuclease VII, large subunit [Fluviicola taffensis DSM 16823] Length = 476 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 86/509 (16%), Positives = 189/509 (37%), Gaps = 52/509 (10%) Query: 10 LDHPEY-SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH---S 62 + PEY ++ +++ ++ ++ S V E+ GH Y L K++ Sbjct: 1 MQTPEYFTLKQVADSIRKVIAERYSRTYWVIAEMHKLNST-KKGHCYPELVQKEDGLIVV 59 Query: 63 RIDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIP-SGS 113 + IWK +I+ +G+E L KIT + + I + P Sbjct: 60 EMRGTIWKQNFERIQQKFYEIVKEPLRDGMELLFQVKIT-YHPIYNIGLEIIDIDPNYAL 118 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRF 170 G L ++ ++L +EG+ + + + +PK +A+I+ D + ++ R+ Sbjct: 119 GALQRERQETLERLNKEGILNANQQIEMALVPKRLAIISQADSKGYSDFVTLLNGHPKRY 178 Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 +F +QGD I + ++ +K D +++ RGGG + +N+ Sbjct: 179 HFNTFLFEAALQGDNAIASIKGQLKRIEEIKHH-----FDAVVIIRGGGGEVGMHCYNNY 233 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 + +AIA +P+++ IGH T+ T+ + A TP+ A + + E L + L Sbjct: 234 ELAKAIATFPLPVLTGIGHSTNLTVCEMIAFRNGITPSDMAYFLLSIFEELDAPLDEA-- 291 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 L+K L S+ + +L + ++ ++ + F Sbjct: 292 -------------------LMKLPKQIQHLLQESKNQFGQLTLTFKQEVQAVLLSEKNAF 332 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + I+ + H + + Q + + + I +++ I +L + +K Sbjct: 333 HGIVKDFEFQV-KHKMTYSNQVLTQLRNQIRSSSGYFFESQKNKRENLINLLQI---HSK 388 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 + + I ++ + ++ ++ L L+RGY + + Sbjct: 389 SILNSSLQTINNQQNQLIRFFPRRFETETKNLEQAELHLNLLDPITILQRGYAIVTNQKG 448 Query: 471 NFITQKRNLATKTRILINFFDGQANAIVI 499 ++ K + I + NA V Sbjct: 449 -VLSAKNQAKAGEELKIVTEAQELNAKVK 476 >gi|330722417|gb|EGH00261.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium IMCC2047] Length = 185 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 88/170 (51%), Gaps = 1/170 (0%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSR 63 S +V++L+ + ++ES V V GEIS SGH YF+LKD+ ++ Sbjct: 1 MPSTASSQREILTVTDLNRRARSLLESQFRQVWVEGEISNL-MKAGSGHWYFTLKDDKAQ 59 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + ++ + + G+ ++ K + + G YQ+I E++I +G G L E+ Sbjct: 60 VRCAMFANRNRSLRINVKNGLHAIIRAKASIYEGRGDYQLIAENMIDAGEGRLQRQFEEL 119 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR 173 K KL EGLF + HK P+P +P I ++TSP+GA IRDIL + P Sbjct: 120 KLKLSREGLFDEAHKRPLPALPTHIGIVTSPSGAAIRDILTVLQPSLPQH 169 >gi|71065848|ref|YP_264575.1| exodeoxyribonuclease VII large subunit [Psychrobacter arcticus 273-4] gi|71038833|gb|AAZ19141.1| Exodeoxyribonuclease VII large subunit [Psychrobacter arcticus 273-4] Length = 516 Score = 190 bits (482), Expect = 6e-46, Method: Composition-based stats. Identities = 95/510 (18%), Positives = 173/510 (33%), Gaps = 68/510 (13%) Query: 17 VSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH----SRIDAIIW 69 +S+ + +++ +H V V+ EI GH YF L KD+ + +W Sbjct: 46 LSDYLSAVDMVIKQTFNHRVWVKAEIRNLSSK--GGHYYFELAEKDDDGKVIASCRGNLW 103 Query: 70 KGTLNKI--EFLPEEGI----EFLVIGKITT-FPGSSKYQIIIESLIPS-GSGTLLTALE 121 + ++ +F G+ + V+ K++ F + + IE + PS G L Sbjct: 104 RFKAVRVLAKFERATGMPLDRDLTVLLKVSAGFHAQYGFSLTIEDIDPSYTLGDLARQYA 163 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFP 178 + +L EGL + P PF + + VI A + D + Sbjct: 164 EMVDRLAGEGLLHLNQQLPTPFDIEHVLVIAPEKAAGLGDFQADANRLASTGACHFHYHN 223 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 QG+ P EI AI+ + PD++++ RGGG++ DL + ND + +A Sbjct: 224 ATFQGNHAPAEIRQAIISAQQQFQDIYQRLPDLLVIIRGGGAVGDLAYLNDYELAALVAE 283 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 IP+ IGHE D + D A TP+ A L ++ + Sbjct: 284 QPIPVWVGIGHERDKVILDEVAHTSFDTPSKVIAAIS--------------AHLAQLVAQ 329 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 ++Y++ + + L + Q S ++ L+ +R NR Sbjct: 330 TLQYQMQIKQAAQRQLNTAMQQTSRQLSQIQSQTIGQLTALQKDSAYAWRSIQQSANRQV 389 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + + Q Q + + Sbjct: 390 KQAARQASELHTQTQSSVYQQLSLASTYSKSHQKTM------------------------ 425 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKR 477 ++ I++ S I+ LK+GY+ + D + +T Sbjct: 426 --------MQSAQQQLIQAQRNS-EHLRDIVLLHRPSRVLKQGYSILTDEKDKRILTSSN 476 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQ 507 L + I I DG+A A +I+ K+ Sbjct: 477 QLYPEQTIHIALKDGKAKAQIIDIKMNKKP 506 >gi|227876637|ref|ZP_03994747.1| exodeoxyribonuclease VII [Mobiluncus mulieris ATCC 35243] gi|227842838|gb|EEJ53037.1| exodeoxyribonuclease VII [Mobiluncus mulieris ATCC 35243] Length = 422 Score = 189 bits (481), Expect = 7e-46, Method: Composition-based stats. Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 13/383 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + D+P + ++ L + ++ ++ V ++ Y + ++F KD + Sbjct: 11 PRALQTTRDNP-WPLALLLEKMDDYIDR-MAPTWVEAQVIEYNQRPGNRMSFFRAKDLEA 68 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + + + G ++ K + + ++ + P+G G +L L Sbjct: 69 DMSMQVKAFGNVIAAAGPAMQAGARVVMQVKPDFYTKTGDLSLMAAEIHPAGMGGMLEEL 128 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ K++L EGLFS +HK +PF+P+ + +I D+ + + R+PL + V Sbjct: 129 ERLKQRLAAEGLFSREHKKELPFLPRRVGLICGHKARAQADVKENVWRRWPLMEFEVREV 188 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ CP+E+A AI E T D+I++ RGGG+ EDL F+DE +VRA + Sbjct: 189 AVQGENCPREVAAAIA------ELDTVADIDVIVVTRGGGAFEDLLGFSDEGVVRAAFAA 242 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SA+GHE D L D+ AD RA TPT AA+ VP + ++ + Sbjct: 243 QTPIVSAVGHEEDTPLLDFVADFRASTPTDAAKRIVPDCVAESELMERGRQKMRQAVGTR 302 Query: 300 IKY--KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + N L R + + + I+ + + Sbjct: 303 VSAGLEWLQAMRSRPVMQNPGAALEQRRGDIAHGVEIMRARIAEILAVFRQDLAADRATL 362 Query: 358 KSDFLIHNIQKNRQHILEKQQHI 380 + +++ + + + Sbjct: 363 TAISPRATLERGYAVLRTPGRTL 385 Score = 83.3 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 2/132 (1%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 +Q + Q V + + + + + + I + + ++ + Sbjct: 292 RQKMRQAVGTRVSAGLEWLQAMRSR--PVMQNPGAALEQRRGDIAHGVEIMRARIAEILA 349 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 ++ L + + + TL+RGY ++ IT + + G A Sbjct: 350 VFRQDLAADRATLTAISPRATLERGYAVLRTPGRTLITDATTVKKGDLLEAVLARGSLVA 409 Query: 497 IVINKAPPKEQP 508 V+ P Sbjct: 410 SVVGANPGAGTA 421 >gi|269976169|ref|ZP_06183165.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris 28-1] gi|306817588|ref|ZP_07451331.1| exodeoxyribonuclease VII large subunit [Mobiluncus mulieris ATCC 35239] gi|269935498|gb|EEZ92036.1| exodeoxyribonuclease VII, large subunit [Mobiluncus mulieris 28-1] gi|304649630|gb|EFM46912.1| exodeoxyribonuclease VII large subunit [Mobiluncus mulieris ATCC 35239] Length = 422 Score = 189 bits (481), Expect = 8e-46, Method: Composition-based stats. Identities = 86/383 (22%), Positives = 165/383 (43%), Gaps = 13/383 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS 62 P + + + D+P + ++ L + ++ ++ V ++ Y + ++F KD + Sbjct: 11 PRALQTTRDNP-WPLALLLEKMDEYIDR-MAPTWVEAQVIEYNQRPGNRMSFFRAKDLEA 68 Query: 63 --RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + + + + G ++ K + + ++ + P+G G +L L Sbjct: 69 DMSMQVKAFGNVIAAAGPAMQAGARVVMQVKPDFYTKTGDLSLMAAEIHPAGMGGMLEEL 128 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+ K++L EGLFS +HK +PF+P+ + +I D+ + + R+PL + V Sbjct: 129 ERLKQRLAAEGLFSREHKKELPFLPRRVGLICGHKARAQADVKENVWRRWPLMEFEVREV 188 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG+ CP+E+A AI E T D+I++ RGGG+ EDL F+DE +VRA + Sbjct: 189 AVQGENCPREVAAAIA------ELDTVADIDVIVVTRGGGAFEDLLGFSDEGVVRAAFAA 242 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 PI+SA+GHE D L D+ AD RA TPT AA+ VP + ++ + Sbjct: 243 QTPIVSAVGHEEDTPLLDFVADFRASTPTDAAKRIVPDCVAESELMERGRQKMRQAVGTR 302 Query: 300 IKY--KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + N L R + + + I+ + + Sbjct: 303 VSAGLEWLQAMRSRPVMQNPGAALEQRRGDIAHGVEIMRARIAEILAVFRQDLAADRATL 362 Query: 358 KSDFLIHNIQKNRQHILEKQQHI 380 + +++ + + + Sbjct: 363 TAISPRATLERGYAVLRTPGRAL 385 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 2/132 (1%) Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 +Q + Q V + + + + + + I + + ++ + Sbjct: 292 RQKMRQAVGTRVSAGLEWLQAMRSR--PVMQNPGAALEQRRGDIAHGVEIMRARIAEILA 349 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 ++ L + + + TL+RGY ++ IT + + G A Sbjct: 350 VFRQDLAADRATLTAISPRATLERGYAVLRTPGRALITDATTVKKGDLLEAVLARGSLVA 409 Query: 497 IVINKAPPKEQP 508 V+ P Sbjct: 410 SVVGANPGAGTA 421 >gi|27228653|ref|NP_758703.1| putative exodeoxyribonuclease VII (large subunit) [Pseudomonas resinovorans] gi|219857077|ref|YP_002474109.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas sp. CA10] gi|26106241|dbj|BAC41681.1| putative exodeoxyribonuclease VII (large subunit) [Pseudomonas resinovorans] gi|219689005|dbj|BAH10096.1| putative exodeoxyribonuclease VII large subunit [Pseudomonas putida] Length = 492 Score = 189 bits (481), Expect = 8e-46, Method: Composition-based stats. Identities = 79/516 (15%), Positives = 168/516 (32%), Gaps = 71/516 (13%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKD 59 ++P + + ++ ++S ++ V + + V E+S ++ +GH Y + + Sbjct: 26 VSPVNAPDPVEQH-LTLSAYLTQIQKAVRAAVPDSSWVIAELSDFKRRP-NGHCYMDILE 83 Query: 60 NH-----SRIDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106 + ++ ++ K+ LP+ G+ L+ + F + +++ Sbjct: 84 SREGAEVAKARCTMFANVAGKVLGEWQQATGGLPQAGMNVLLKVRAD-FSPQFGFSLMVT 142 Query: 107 SLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 + PS G + ++K L E F Q P P +AV+ A + D + Sbjct: 143 GIDPSYTLGDMQAKMQKIIVSLKERQWFDLQRGLPSPGGFWRVAVVAPHEAAGLADFRRD 202 Query: 166 ISCRFPLRV---IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 V F QG + I +A+ ++ + + D + + RGGG+ Sbjct: 203 AEQLAAAEVCGFEYFSATFQGRDASDSIRSALRTVHEQHQQQP---FDAVCIIRGGGAKS 259 Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 DL ND + + +P+ + IGHE D + D A R TP+ Sbjct: 260 DLAWLNDANLAAWVCRLPVPVFTGIGHEIDECVLDLVAHRRFDTPSKVIGFIKTALMSEA 319 Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 S+ R N +I+RL+ + P+ D+ S R+ + L Sbjct: 320 STARAQVERANGMILRLVSGQA----------PHLDRAWSTFSRRVTETLHREQRQLLQQ 369 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + + R + Q ++ Sbjct: 370 QSSLDKGRDRL------------LSQQRMALQLAQDRFSRLGAGLC-------------- 403 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462 +R+ + I + + + + + L RG+ Sbjct: 404 -----------VAERQRGLFAASRVASLSMALIAKETSRLELASTVFDKTNPLALLGRGF 452 Query: 463 TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 ++ I+ ++ + F DG A V Sbjct: 453 ALVRGPGGVIISSAEQARDAGKLDLAFADGHVTADV 488 >gi|62261146|gb|AAX77963.1| unknown protein [synthetic construct] Length = 496 Score = 189 bits (480), Expect = 9e-46, Method: Composition-based stats. Identities = 96/506 (18%), Positives = 187/506 (36%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 33 LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 89 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 90 NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 148 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 149 ARKIGILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 208 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 209 DIYEAKMQGAECSESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 263 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 264 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 304 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 305 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 360 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 361 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 396 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 397 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 456 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 457 SQKQAQKYLNLEIIYADGQVQVEVKN 482 >gi|56708255|ref|YP_170151.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110670726|ref|YP_667283.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis FSC198] gi|224457375|ref|ZP_03665848.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|254370741|ref|ZP_04986746.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis FSC033] gi|254875076|ref|ZP_05247786.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|56604747|emb|CAG45823.1| Exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110321059|emb|CAL09206.1| Exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568984|gb|EDN34638.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis FSC033] gi|254841075|gb|EET19511.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis MA00-2987] gi|282159483|gb|ADA78874.1| exodeoxyribonuclease VII large subunit [Francisella tularensis subsp. tularensis NE061598] Length = 461 Score = 189 bits (480), Expect = 9e-46, Method: Composition-based stats. Identities = 96/506 (18%), Positives = 187/506 (36%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + + E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELMKSTIEMSFGYEGFWIVAELSEWR---KSGKHYYGELIEHDGISKYPIAKIRC 63 Query: 67 IIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F G ++ L+ ++ + S + I + P+ G Sbjct: 64 NCWANKADYIHNKFSLVTGEKLSSDMKVLMKVTVS-YHISFGLSLNIVDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 +KL ++G+ +P+ IAVITS T A D ++ Sbjct: 123 ARKIGILEKLAKKGILEKNKSLAMPYDFTSIAVITSITAAGKGDFFEEADKLQDLGLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC + ++ A ++ D I++ RGGGS DL FN+ Sbjct: 183 DIYEAKMQGAECSESVSTAFAKIEA-----KAFDYDAIVVIRGGGSQADLDWFNNITPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSKIPVMIGIGHERDTTVLDEICTKRFDTPSKVINFIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 +I N + L ++ ++ ++++LD L + +E +++ ++ H Sbjct: 279 --NIIITNAKNAKYNYADILKITNNSVKQNKHQLDSLYHNFKTKIEHYLYQTNQNIEH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + + + + L K + ++N I Sbjct: 335 ------------------------NYKATISIARGLVKLYGKSMDMQYDNIISNSQNLIK 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 ++++ I + IK + + + + S + + TL+RG++ + + +IT Sbjct: 371 NSQHNLEESYNHSLSIAKNVIKYYNQASEYLYKQILSISIEPTLRRGFSITKTKDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + I + DGQ V N Sbjct: 431 SQKQAQKYLNLEIIYADGQVQVEVKN 456 >gi|325846568|ref|ZP_08169483.1| exodeoxyribonuclease VII, large subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481326|gb|EGC84367.1| exodeoxyribonuclease VII, large subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 393 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 103/371 (27%), Positives = 165/371 (44%), Gaps = 15/371 (4%) Query: 15 YSVSELSYHLKH--IVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV + + ++K ++ +V ++GEI+ Y+ H+ H YFSLK++ ID I+ Sbjct: 4 LSVKQFNQYIKTSLKLDPLFQNVSIKGEIANYKISHN--HIYFSLKEDEEVIDCAIYYYE 61 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + G E +V G + SK I + ++ G K K+ ++G Sbjct: 62 DKDLG-DFNNGDEVIVEGNLIYNSFFSKISIAVNNIEKKGLSEDYIKFLKLKEDFYKKGY 120 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F + K I PK I +ITS A I D + I+ + + ++PVKVQG EI Sbjct: 121 FDHERKKSISSYPKNIGLITSDKSAAIVDFISVINKEISDINIYLYPVKVQGLSAKSEII 180 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 NAI L+ + D I++ RGGGS EDL FN++ +V I + PIISAIGH+ Sbjct: 181 NAIDILDE-------KKLDAIVITRGGGSKEDLKVFNEKDLVEKIYKAKSPIISAIGHKI 233 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK--INTLNS 309 D +L D +D+ TPT A V + ++ + +L + + R I K Sbjct: 234 DLSLTDLVSDVSLQTPTEAGSYLVRNYKKIRDKINDLFINIKKTLNRNIDLKELKLRNLG 293 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + L LD L + +E I +K + + R+ S I I+K Sbjct: 294 DKLELYKIENLLEKKSNDLDLLFDKFNKTIENDIRQKENKISILKYRLNSINSILEIKKK 353 Query: 370 RQHILEKQQHI 380 +I + + Sbjct: 354 SIYIKDLDDKL 364 Score = 59.4 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 6/139 (4%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L+ N +K R I + +I++ + +++ L+ + L + + +N + + Sbjct: 256 LVRNYKKIRDKINDLFINIKKTLNRNIDLKELKLRNLGDKLELYK--IENLLEKKSNDLD 313 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTLKRGYTS-IQDTNNNFITQKRNL 479 L + + + I+ +SI L S + K+ + I+D ++ I + +L Sbjct: 314 LLFDKFNKTIENDIRQKENKISILKYRLNSINSILEIKKK--SIYIKDLDDKLIYSRNSL 371 Query: 480 ATKTRILINFFDGQANAIV 498 K ++ I F DG+ A + Sbjct: 372 KNKDKVKIVFSDGEVKAEI 390 >gi|329957307|ref|ZP_08297827.1| Exonuclease VII, large subunit [Bacteroides clarus YIT 12056] gi|328523020|gb|EGF50123.1| Exonuclease VII, large subunit [Bacteroides clarus YIT 12056] Length = 416 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 90/375 (24%), Positives = 166/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ +L+ ++ +E L ++ E+S R S+GH Y F KD ++ Sbjct: 4 LSLYDLNALVRRSLEQCLPDTYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 63 TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174 ++ K+L EEG+ + + IP +P+ IAVI+SPT A D ++ Sbjct: 122 RRRKEILKQLEEEGVLTLNKELKIPRLPQRIAVISSPTAAGYGDFCHQLQNNPGGFYFHT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG+ + + A+ ++N+ + D++++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGERVEESVLAALDKINSRLDN-----FDVVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AAE + L L ARL + Sbjct: 237 ACAQFPLPIITGIGHERDDTVIDSVAHTRVKTPTAAAEFLIDCMNDAADELDLLAARLYD 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L+ + L S +P++ +S + L + +++ + +FR++ + Sbjct: 297 GARNLLMQEHQRLVSCKNRIPSAAYSCISDVKLTLLTVRKDIVQAVTSSLFRQHHRLELL 356 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 357 QQRLMDASPEKQLAR 371 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 45/125 (36%), Gaps = 1/125 (0%) Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 ++ + E + ++ + + + I + + + I ++ + H Sbjct: 293 RLYDGARNLLMQEHQRLVSCKNRIPSAAYSCISDVKLTLLTVRKDIVQAVTSSLFRQHHR 352 Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + + + L + + L RGY+ N + L I+ + G+ ++V NK Sbjct: 353 LELLQQRLMDASPEKQLARGYSITL-KNGKAVKNTSLLNEGDEIITRLYHGEVISVVTNK 411 Query: 502 APPKE 506 + + Sbjct: 412 SSKNK 416 >gi|72383296|ref|YP_292651.1| exodeoxyribonuclease VII large subunit [Prochlorococcus marinus str. NATL2A] gi|72003146|gb|AAZ58948.1| Exodeoxyribonuclease VII large subunit [Prochlorococcus marinus str. NATL2A] Length = 386 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 89/315 (28%), Positives = 153/315 (48%), Gaps = 11/315 (3%) Query: 15 YSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 YSV EL+ + ++ + +S + GH + +L D + +DA+ W T+ Sbjct: 14 YSVKELNESIGLLLSRGFAPKFILEAAVS--KSQIKKGHLWLTLTDGKASVDAVAWSSTI 71 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 ++FLP++ ++IGK+ + ++ + + + PS T+L E K L +EGL Sbjct: 72 KSLKFLPKQDDGVVIIGKLNFWESQARVSVQVFDIRPS-ISTVLRKFEIVKSNLFKEGLI 130 Query: 134 SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIAN 192 D + +P P + ++TS + + D+L+ R+PL ++ I P+ VQGD K Sbjct: 131 DDSLRKKLPKYPHSLGILTSVPSSALADMLRTAKERWPLTKLQIIPIPVQGDNANK---- 186 Query: 193 AILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETD 252 L+ K + + + +I+ARGGGS EDL F+ E+I R IA IP+I+ IGHE D Sbjct: 187 --LKSILSKLKKNKLQVEALIIARGGGSREDLMLFDSEIIAREIATFPIPVITGIGHEDD 244 Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+AD +D R+ TPT A +P +E ++ + + L + + TL + Sbjct: 245 LTVADLVSDHRSATPTAAIVDLLPSREIEKNKFLQNKKLLKYYLKLFFQNTKKTLITKKS 304 Query: 313 ALPNSDQTLSCSRYR 327 + L R Sbjct: 305 IFQSYSPRLLIKNKR 319 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 6/121 (4%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + + KK L + + TK + + + R+ IK+ Sbjct: 266 LLPSREIEKNKFLQNKKLLKYYLKLFFQNTKKTLITKKSIFQSYSPRL------LIKNKR 319 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 T ++ IL + + + LKRG+ I D + N I +N+ ++++ F DG+ A V Sbjct: 320 TRINYMYEILNALSPRKLLKRGFALITDESGNSIYSVKNIKENDKLIVQFCDGKITAEVD 379 Query: 500 N 500 + Sbjct: 380 S 380 >gi|239621684|ref|ZP_04664715.1| exodeoxyribonuclease 7 large subunit [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239515559|gb|EEQ55426.1| exodeoxyribonuclease 7 large subunit [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 390 Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 100/357 (28%), Positives = 163/357 (45%), Gaps = 19/357 (5%) Query: 20 LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII----WKGTLNK 75 LS VE V G+I+ + G AY +L+D+ I + + G Sbjct: 2 LSQKFYGAVER-WPSAWVTGQITQINTRRA-GSAYITLRDDFEDI--AMEVNGF-GRFAA 56 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG-TLLTALEKRKKKLLEEGLFS 134 +G ++ GK + + + ++++ G+G +L +++ +K+L EGLF Sbjct: 57 AASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLKAMIDELRKQLKGEGLFD 116 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 HK P+P PK I +I +P D++ ++ R+P + + V VQG++CP E+ A Sbjct: 117 ADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPAEVVQA 176 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I QL+ P D+II+ARGGGS EDL F+DE +VRA + P+IS+IGHE DW Sbjct: 177 IAQLDA------DPSVDVIIVARGGGSFEDLIGFSDERVVRAAYACTTPLISSIGHEDDW 230 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TL D ADLRA TPT AA+ VP + R+ + ++ +I + Sbjct: 231 TLLDLVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRVRSRVENEIRLIEGYANR 290 Query: 314 --LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L L + +D + L+ L I+ + + + + Sbjct: 291 PSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAHASLTALSPQSTLNR 347 Score = 93.7 bits (231), Expect = 7e-17, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 85/299 (28%), Gaps = 14/299 (4%) Query: 208 RPDIIILARGGGSIEDL-----WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADL 262 R D I+ GGS++ + E + A +P A D+ Sbjct: 85 RGDTILKVGAGGSLKAMIDELRKQLKGEGLFDADHKLPLPEFPKTIGLICAPQARAEGDV 144 Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + V A + I +L + + + + + + Sbjct: 145 ITNVNLRWPSVTFKVVHVHV-QGEQCPAEVVQAIAQLDADPSVDVIIVARGGGSFEDLIG 203 Query: 323 CSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R+ R L I ++ +++ ++ + E Q + Sbjct: 204 FSDERVVRAAYACTTPLISSIGHEDDWTLLDLVADLRASTPTDAAKRVVPDVRE-QSQLI 262 Query: 382 QIVKQHLRYIFLEKKEKIAIL------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + +R + E L Q + I + R++ L + Sbjct: 263 EGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHTMLEPHQRLIDDSLQRLDIGLRRIV 322 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA 494 +V L + + ++TL RGY +Q + + + ++ I + G Sbjct: 323 DDAQLTVERAHASLTALSPQSTLNRGYAVVQSADGHVLDDASQVSPGDGITVTLKKGVI 381 >gi|150002869|ref|YP_001297613.1| exodeoxyribonuclease VII large subunit [Bacteroides vulgatus ATCC 8482] gi|254884431|ref|ZP_05257141.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 4_3_47FAA] gi|294778148|ref|ZP_06743579.1| exodeoxyribonuclease VII, large subunit [Bacteroides vulgatus PC510] gi|319642441|ref|ZP_07997092.1| exodeoxyribonuclease VII [Bacteroides sp. 3_1_40A] gi|149931293|gb|ABR37991.1| putative exodeoxyribonuclease VII large subunit [Bacteroides vulgatus ATCC 8482] gi|254837224|gb|EET17533.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 4_3_47FAA] gi|294448007|gb|EFG16576.1| exodeoxyribonuclease VII, large subunit [Bacteroides vulgatus PC510] gi|317385897|gb|EFV66825.1| exodeoxyribonuclease VII [Bacteroides sp. 3_1_40A] Length = 435 Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats. Identities = 88/399 (22%), Positives = 171/399 (42%), Gaps = 29/399 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61 ++ S+ EL+ +K + + L V+ E+S R + SGH Y F K+ Sbjct: 1 MEEHPLSLYELNALVKRSIHACLPDTYWVQAELSDVRSNY-SGHCYLEFVQKEPRGNNLI 59 Query: 62 SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ IW ++ EE GI+ +V + Y + ++ + P+ Sbjct: 60 AKARGTIWSNVYRLLKPYFEEETGQAFVAGIKVMVKVAVEFHELYG-YSLTVQDIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G + + K+L EEG+ + + IP + + IAVI+S T A D ++ Sbjct: 119 LGDMARRRREILKQLEEEGVLTLNKELEIPLLAQRIAVISSATAAGYGDFCNQLEQNPYG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QG+ + + A+ ++ ++ D++++ RGGG+ DL F+ Sbjct: 179 FVFYPRLFPAIMQGERVEQSVITALDAIHACRDDW-----DVVVIIRGGGATSDLSGFDT 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + A IPII+ IGHE D T+ D + R TPT AAE + L + Sbjct: 234 YELAANCAQFPIPIITGIGHERDDTVLDCVSHTRVKTPTAAAEYLINHLHDTAKVLEDYA 293 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + I ++ + LN +++ +P L YR +R+ + LE L+ + ++ Sbjct: 294 SAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKETH 353 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + R+ + K + + +Q ++ ++ Sbjct: 354 CLKMMETRLGIVS-QRRLVKEKHRLQLLEQELKAASPEN 391 Score = 99.1 bits (245), Expect = 2e-18, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 55/145 (37%), Gaps = 2/145 (1%) Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYL 416 + ++H I + + + + + R E+ + + E ++R+ Sbjct: 292 YASAVLHTISTRMERENTRLNRMVERIPMQTRMRLKEEHYRQERIMKHLEVGLQSRLTKE 351 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 +K + TR+ + ++ + + + L++ + +N LKRGY+ N + Sbjct: 352 THCLKMMETRLGIVSQRRLVKEKHRLQLLEQELKAASPENLLKRGYSITL-KNGKAVIDA 410 Query: 477 RNLATKTRILINFFDGQANAIVINK 501 L + F G+ +IV K Sbjct: 411 SVLQPGDELTTRFAKGEIKSIVTKK 435 >gi|313837023|gb|EFS74737.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL037PA2] gi|314929389|gb|EFS93220.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL044PA1] gi|314971527|gb|EFT15625.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL037PA3] Length = 415 Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats. Identities = 102/380 (26%), Positives = 179/380 (47%), Gaps = 17/380 (4%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSG-HAYFSLKDNHS 62 ++ N++D+P ++ + +K VE S + V+ ++ SG + +L+D Sbjct: 1 MAEPNTVDNPR-PLAWVVNAVKGWVERC-SAIWVQAQVIEVTRR--SGPTQFLTLRDPAE 56 Query: 63 RIDA--IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I A + L+ E G+ + K T + + + + + P+G G LL L Sbjct: 57 EISASATCHRRVLDAAG-PIESGMTVTALIKPTVWSRTGRLSFEVSEITPTGEGQLLAQL 115 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPV 179 E+RK+ L EGLF IP +P+ I +IT RD+ + + R+P R ++ Sbjct: 116 ERRKRLLEAEGLFDATLHKTIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVRNT 175 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQG + + L + P D+I++ARGGGS+EDL F+DE +VRA+ + Sbjct: 176 LVQGPTAAQ------QIIAALADLDADPTVDVIVIARGGGSLEDLLPFSDEALVRAVYAT 229 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 P++SAIGHE D + D ADLRA TPT A ++ VP ++ +ARL I R Sbjct: 230 RTPVVSAIGHERDNPILDLVADLRASTPTDAGKLIVPDATEQTQAVETAKARLRQAITRF 289 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 I ++ L + + N TL + +LD + L ++ + R +H++ R+ Sbjct: 290 IDVEMTHLAQIRSRPVMVNPAATLDIAVEKLDSTLQRLRLATNRVLGAESRDVSHMLERV 349 Query: 358 KSDFLIHNIQKNRQHILEKQ 377 ++ + + + + + Sbjct: 350 RAMSPKATLDRGYAILTDSE 369 Score = 90.2 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 2/144 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + Q + + + Q + + + + + M+ + + + R+ Sbjct: 270 EQTQAVETAKARLRQAITRFIDVEMTHLAQIRSRPVMV--NPAATLDIAVEKLDSTLQRL 327 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + + VS +++ + K TL RGY + D+ IT + T + + Sbjct: 328 RLATNRVLGAESRDVSHMLERVRAMSPKATLDRGYAILTDSEGGSITSVDDTDTGAGLSV 387 Query: 488 NFFDGQANAIVINKAPPKEQPTKK 511 DG V + Sbjct: 388 YLSDGTLGVTVNSLDRRTPNRPTT 411 >gi|218265100|ref|ZP_03478688.1| hypothetical protein PRABACTJOHN_04398 [Parabacteroides johnsonii DSM 18315] gi|218221589|gb|EEC94239.1| hypothetical protein PRABACTJOHN_04398 [Parabacteroides johnsonii DSM 18315] Length = 445 Score = 188 bits (476), Expect = 3e-45, Method: Composition-based stats. Identities = 93/388 (23%), Positives = 170/388 (43%), Gaps = 27/388 (6%) Query: 11 DHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS------- 62 + E+S+ EL+ +K V + VR E+S R +SGH Y + ++ Sbjct: 11 ERQEFSLLELNNRVKEAVLNAFPETCWVRAEMSDVRQNAASGHCYLEFIEKNAITGQLVA 70 Query: 63 RIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-GS 113 + IW T ++ F E G + LV + Y + + + P+ Sbjct: 71 KARGSIWAKTFRMLKPYFEMETGQMFASGLKVLVKVSVEFHELYG-YSLTVLDIDPAYTL 129 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRF 170 G ++ + ++L EEG+F+ + P P +P IAVITSPT A D L ++ + Sbjct: 130 GDMIRKRLEIIRQLKEEGVFTLNKELPFPTLPMRIAVITSPTAAGYEDFLNQLSGNKAGY 189 Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 P +FP +QG+ + + A+ ++ + D++++ RGGG+ DL F+ Sbjct: 190 PFYTKLFPALMQGERTEESVIAALDRVYRYVDC-----FDVVVIIRGGGATSDLNSFDSY 244 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 ++ A +PII+ IGHE D T+ D A R TPT AE + + + L+ Sbjct: 245 LLAANCAQFPLPIITGIGHERDDTILDMVAHTRMKTPTAVAEFLIGRMDKAAGEVEELQQ 304 Query: 291 RLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + ++ ++ + N L SL LP + + +R +L R+ +L + + + Sbjct: 305 EVCSLATDILSRQKNFLQSLGSRLPVLAINRIERNRSQLQRMGMQLPTDAHAFLNQWASK 364 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQ 377 + R+ + ++NR L +Q Sbjct: 365 LEAMQVRLANRVESSLAERNRFIQLTEQ 392 Score = 83.3 bits (204), Expect = 1e-13, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 63/184 (34%), Gaps = 5/184 (2%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 D L + + P + L + + + + S + + + + Sbjct: 267 DTILDMVAHTRMKTPTAVAEFLIGRMDKAAGEVEELQQEVCSLA-TDILSRQKNFLQSLG 325 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + + I + + + L + + ++ + R+ + + Sbjct: 326 SRLPVLA---INRIERNRSQLQRMGMQLPTDAHAFLNQWASKLEAMQVRLANRVESSLAE 382 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 + + +T + ++ + LKRGY+ + I Q LA ++ F DG+ + Sbjct: 383 RNRFIQLTEQFIKMASPDYVLKRGYSLTL-KDGKIIKQADGLAIGDELVTRFADGEVRST 441 Query: 498 VINK 501 V+NK Sbjct: 442 VLNK 445 >gi|32186999|gb|AAP73746.1| XseA [Escherichia coli] Length = 307 Score = 187 bits (475), Expect = 4e-45, Method: Composition-based stats. Identities = 88/360 (24%), Positives = 144/360 (40%), Gaps = 56/360 (15%) Query: 158 VIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILAR 216 + DIL + R P L VII+P VQGD+ P +I AI N E D++I+ R Sbjct: 1 ALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNE------CDVLIVGR 54 Query: 217 GGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVP 276 GGGS+EDLW FNDE + RAI S IPI+SA+GHETD T+AD+ ADLRAPTP+ AAE+ Sbjct: 55 GGGSLEDLWSFNDERVARAIFASRIPIVSAVGHETDVTIADFVADLRAPTPSAAAEVVSR 114 Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRE 334 ++ L + + RL + + + + L L +R + +RL + Sbjct: 115 NQQELLRQVQSTHQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKR 174 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + LE + R + + ++ I + + I + + + + Sbjct: 175 MSFALESQLKRAGQQQQRLTRQLVQQNPQSRIHRAQTRIQQLEYRLAE------------ 222 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 L ++ + L++ + Sbjct: 223 -----------------------------------TLRAQLSATRERFGNAVTHLEAVSP 247 Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQL 514 +TL RGY+ + + Q + + + DG + V ++ K Sbjct: 248 LSTLARGYSVTSAADGAVLKQVKQVKVGETLTTRLGDGVVISEVSAVTKTRKSRKKTSNP 307 >gi|154493806|ref|ZP_02033126.1| hypothetical protein PARMER_03149 [Parabacteroides merdae ATCC 43184] gi|154086419|gb|EDN85464.1| hypothetical protein PARMER_03149 [Parabacteroides merdae ATCC 43184] Length = 445 Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 92/393 (23%), Positives = 173/393 (44%), Gaps = 27/393 (6%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS-- 62 + + +S+ EL+ +K ++ + VR E+S R +SGH Y + ++ Sbjct: 6 NNQNQERQAFSLLELNNRVKGVILNAFPETCWVRAEMSDVRTNAASGHCYLEFIEKNAIT 65 Query: 63 -----RIDAIIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLI 109 + IW T ++ F E G + LV I Y + + + Sbjct: 66 GQLVAKARGSIWAKTFRMLKPYFEMETGQIFASGLKVLVKVSIEFHELYG-YSLTVLDID 124 Query: 110 PS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168 P+ G ++ + ++L EEG+F+ + P+P +PK IAVITSPT A D L +++ Sbjct: 125 PAYTLGDMIRKRMEIIRQLKEEGVFTLNKELPLPTLPKRIAVITSPTAAGYEDFLNQLAN 184 Query: 169 ---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 +P +FP +QG+ + + A+ ++ + D++++ RGGG+ DL Sbjct: 185 NKAGYPFYPKLFPALMQGERTEESVIAALDRVYRHADC-----FDVVVIIRGGGATSDLN 239 Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285 F+ ++ A +PII+ IGHE D T+ D A R TPT AE + + + Sbjct: 240 SFDSYLLAANCAQFPLPIITGIGHERDDTILDMVAHTRMKTPTAVAEFLIGQMDKAAGEV 299 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 L+ + ++ ++ + N L SL LP + + +R L R+ +L + + Sbjct: 300 EELQQDVCSLATEILSRQKNFLQSLGSRLPVLAINRIERNRSLLQRIGMQLPTDAHAFLN 359 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 + + R+ + +++R L +Q Sbjct: 360 QWASKLEAMQVRLANRAESSLAERSRFVQLTEQ 392 Score = 77.9 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 4/136 (2%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + + + + + + I + I L + + ++ + Sbjct: 314 LSRQKNFLQSLGSRLPVLA---INRIERNRSLLQRIGMQLPTDAHAFLNQWASKLEAMQV 370 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ + V +T + ++ + LKRGY+ + I Q L + Sbjct: 371 RLANRAESSLAERSRFVQLTEQFIKMASPDYVLKRGYSLTL-KDGKIIKQADGLVVGDEL 429 Query: 486 LINFFDGQANAIVINK 501 + F DG+ + V+ K Sbjct: 430 ITCFADGEVRSKVLKK 445 >gi|325300402|ref|YP_004260319.1| exodeoxyribonuclease VII, large subunit [Bacteroides salanitronis DSM 18170] gi|324319955|gb|ADY37846.1| exodeoxyribonuclease VII, large subunit [Bacteroides salanitronis DSM 18170] Length = 432 Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 86/395 (21%), Positives = 161/395 (40%), Gaps = 30/395 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH----- 61 ++H S+ EL+ ++ V ++ V+ E+S R + SGH Y F KD Sbjct: 1 MEHTPLSLYELNALVRQSVRLSMPDAYWVQAELSDVRTNY-SGHCYLEFVQKDPKSNALL 59 Query: 62 SRIDAIIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ I+W +++ E G++ LV + Y + + + P+ Sbjct: 60 AKARGIVWSNVFRELKPYFERETGQAFVAGLKVLVRVTVDFHELYG-YSLTVSDIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---R 169 G + + ++L EEG+ + + +P + + IAVI+SPT A D ++ Sbjct: 119 LGDMAKRRREILQRLEEEGVLTLNKELELPELTQRIAVISSPTAAGYGDFCDQLERNAFG 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QG++ I A+ ++N R D++++ RGGG+ DL F+ Sbjct: 179 FVFYTKLFPAVMQGEQVEASIIRALNRINA-----GHGRWDVVVIIRGGGATSDLSGFDT 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + A IPII+ IGHE D T+ D A R TPT AAE + L Sbjct: 234 YELATNCAQFPIPIITGIGHERDDTVIDKVAHTRVKTPTAAAEFLINHLRKTADRLETYA 293 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + L + +P + +R +RL + + + + R+ Sbjct: 294 SFFYQEVPEWLGQQKERLERWVARIPARVQMRIQNEGFRQERLVKRVHLAWQARMMRETY 353 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 + + L +Q+ + +Q + Sbjct: 354 RLQL--DGRLNVALQSRLQREGGRLQLLEQQVRAA 386 Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 57/160 (35%), Gaps = 6/160 (3%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L + + + + + + ++ + I V+ ++ ++ Sbjct: 278 LINHLRKTADRLETYASFFYQEVPEW-LGQQKERLERWVARIPARVQMRIQNEGFRQERL 336 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + +H+ + R+ ++ L R+ L +++ + + + +++ + + L Sbjct: 337 VKRVHLAWQ---ARMMRETYRLQ-LDGRLNVALQSRLQREGGRLQLLEQQVRAASPELLL 392 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 ++GY+ N +T L ++ G+ + V Sbjct: 393 QKGYSITL-KNGKAVTDASALHPGDEVVTRVAKGEFKSKV 431 >gi|255011784|ref|ZP_05283910.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis 3_1_12] gi|313149621|ref|ZP_07811814.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis 3_1_12] gi|313138388|gb|EFR55748.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis 3_1_12] Length = 414 Score = 187 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 97/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L V+ E+S R S+GH Y F KD ++ Sbjct: 5 LSLHELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV + Y + ++ + P+ G + Sbjct: 64 TIWANIYRLLKPYFEEATGQSFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + K+L EEG+ + + +P +P+ IAVI+S T A D ++ F Sbjct: 123 RRRREILKQLAEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNSRGFYFNT 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ +N E D++++ RGGG+ DL F+ ++ Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARMEE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + E L L L+ Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLINRMEEAADRLEELAGELHA 297 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 I ++ + L+ L +P+ + LS SR +L L H E ++ R++ + Sbjct: 298 RIYHRLEQERKRLSLLQSRIPSQVMRKLSESRIKLQMAKSNLSHAAETLLVRQHHRLELL 357 Query: 354 INRIKSDFLIHNIQK 368 NRI +++ Sbjct: 358 QNRIADASPQKLLKR 372 Score = 93.3 bits (230), Expect = 9e-17, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 47/141 (33%), Gaps = 4/141 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LI+ +++ + E + + + E+K + + Q ++ + Sbjct: 276 LLINRMEEAADRLEELAGELHARI---YHRLEQERKRLSLLQSRIPSQVMRKLSESRIKL 332 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + H + + + + + LKRGY+ + L Sbjct: 333 QMAKSNLSHAAETLLVRQHHRLELLQNRIADASPQKLLKRGYSITL-KEGKAVKNAACLR 391 Query: 481 TKTRILINFFDGQANAIVINK 501 ++ ++G+ + V + Sbjct: 392 PGDELITRLYEGEVKSKVESI 412 >gi|167765360|ref|ZP_02437473.1| hypothetical protein BACSTE_03748 [Bacteroides stercoris ATCC 43183] gi|167696988|gb|EDS13567.1| hypothetical protein BACSTE_03748 [Bacteroides stercoris ATCC 43183] Length = 415 Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats. Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 28/390 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R S+GH Y F KD ++ Sbjct: 4 LSLYELNALVRRSLEQCLPDAYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 63 TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174 ++ K+L EEG+ + + +P +P+ IAV++SPT A D ++ Sbjct: 122 RRRKEILKQLEEEGVLTLNKELRMPRLPQRIAVVSSPTAAGYGDFCHQLQNNPGGFYFYT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD + + +A+ ++N+ + D++++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGDRVEESVLSALDKINSRSDS-----FDVVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE + L +L ARL + Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIDCMNEAADELESLAARLCD 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + L+ + L S +P++ +S ++ L + +++ + +FR++ + Sbjct: 297 GVRNLLVQEQQKLVSYRNRIPSAAYGCISDAKLTLLTVRKDIVQAVTASLFRQHHRLELL 356 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 R+ + + L+ + I+ Sbjct: 357 QQRLADASPEKQLARGYSITLKNGKAIKNA 386 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 1/135 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + E + ++ + E+++ ++ + + I + + I Sbjct: 282 EAADELESLAARLCDGVRNLLVQEQQKLVSYRNRIPSAAYGCISDAKLTLLTVRKDIVQA 341 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++ + H + + + L + + L RGY+ N I L I+ + Sbjct: 342 VTASLFRQHHRLELLQQRLADASPEKQLARGYSITL-KNGKAIKNASLLNEGDEIITRLY 400 Query: 491 DGQANAIVINKAPPK 505 G+ ++V NK K Sbjct: 401 KGEVVSVVTNKLSKK 415 >gi|296128823|ref|YP_003636073.1| exodeoxyribonuclease VII, large subunit [Cellulomonas flavigena DSM 20109] gi|296020638|gb|ADG73874.1| exodeoxyribonuclease VII, large subunit [Cellulomonas flavigena DSM 20109] Length = 421 Score = 186 bits (473), Expect = 6e-45, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 156/366 (42%), Gaps = 14/366 (3%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH--SRID 65 ++ + V L+ + V + + V V G++ R +S + +L+D I Sbjct: 25 DTTPERPWPVRHLAPKVADYV-ARMPPVWVEGQLLNVRRWNSL--LFLTLRDTDLDMSIS 81 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + + +G +V + + + G G LL +E+ K Sbjct: 82 VTLPAVAAMSLGDRFADGAHVVVHARPQYQVKKGSLGFAADRVRLVGLGELLARIEQLKG 141 Query: 126 KLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGD 184 L EGLF D K +PF+P ++ ++ + G D++ R+P ++ I V VQG Sbjct: 142 VLAAEGLFDDARKRALPFLPGVVGLVCAQQGDAEHDVVSNARARWPAVQFEIRRVTVQGP 201 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 E++ AI E PR +++++ARGGGS EDL F++E +VRA A P++ Sbjct: 202 SAVPEVSAAIA------ELDADPRVEVVVVARGGGSFEDLLPFSNETLVRAAAACRTPLV 255 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGH D L D ADLRA TPT AA+ VP ++ L+ R + + + Sbjct: 256 SAIGHHMDSPLLDLVADLRASTPTDAAKRVVPDVTEERARLVQARTRTRAAVQHRLAREE 315 Query: 305 NTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 +TL L L + + L RL ++ + + ++++ Sbjct: 316 STLAHLRSRPVLARPETLVDPHVDVLRRLTARGRAVVDAAVALAATETARLAGQVRALSP 375 Query: 363 IHNIQK 368 +++ Sbjct: 376 AATLER 381 Score = 94.1 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 18/161 (11%), Positives = 56/161 (34%), Gaps = 5/161 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ +++ ++ + E++ + Q + + + + L Sbjct: 260 HHMDSPLLDLVADLRASTPTDAAKRVVPDVTEERARLVQARTRTRAAVQHRLAREESTLA 319 Query: 404 MLR-----EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 LR + + + +++L R ++ + T + +++ + TL Sbjct: 320 HLRSRPVLARPETLVDPHVDVLRRLTARGRAVVDAAVALAATETARLAGQVRALSPAATL 379 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 +RGY +Q + + ++ R+ + G+ A V Sbjct: 380 ERGYAVVQRADGVVVRSPDDVTAGDRLRVRVAAGELTAEVT 420 >gi|160890668|ref|ZP_02071671.1| hypothetical protein BACUNI_03113 [Bacteroides uniformis ATCC 8492] gi|270295765|ref|ZP_06201965.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D20] gi|317479801|ref|ZP_07938921.1| exonuclease VII [Bacteroides sp. 4_1_36] gi|156859667|gb|EDO53098.1| hypothetical protein BACUNI_03113 [Bacteroides uniformis ATCC 8492] gi|270273169|gb|EFA19031.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D20] gi|316904007|gb|EFV25841.1| exonuclease VII [Bacteroides sp. 4_1_36] Length = 410 Score = 186 bits (473), Expect = 6e-45, Method: Composition-based stats. Identities = 90/375 (24%), Positives = 167/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L V+ E+S R S+GH Y F KD ++ Sbjct: 4 LSLYELNALVRRSLEQCLPDECWVQAELSDVRTN-STGHCYLEFVQKDPRSNSLIAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 63 TIWANVFRLLKPYFEEATGQAFVAGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + K+L EEG+ + + +P +P+ IAVI+SPT A D ++ F Sbjct: 122 RRRREILKQLEEEGVLTLNKELDMPRLPQRIAVISSPTAAGYGDFCHQLENNSRGFYFYT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD + + +A+ ++N D++++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGDRVEESVLSALDRVNARLSE-----FDVVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE + + L L +RL+ Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIESMDSAADELEMLASRLHE 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + L++ + L+ +P++ +S ++ L + +++ + +FR + Sbjct: 297 GVRNLLQQEQRRLSGYKNRIPSAAYHRISDAKMALLTVRKDVVQAVTSSLFRHRHRLELL 356 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 357 QQRLADASPEKLLAR 371 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 46/138 (33%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 FLI ++ + + + V+ + E++ + + +RI + Sbjct: 275 FLIESMDSAADELEMLASRLHEGVRN---LLQQEQRRLSGYKNRIPSAAYHRISDAKMAL 331 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + ++ + + + + L + + L RGY+ + + L Sbjct: 332 LTVRKDVVQAVTSSLFRHRHRLELLQQRLADASPEKLLARGYSITL-KDGKVVKNADELQ 390 Query: 481 TKTRILINFFDGQANAIV 498 I +G+ +IV Sbjct: 391 ENDMITTRLQNGEVVSIV 408 >gi|288800053|ref|ZP_06405512.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon 299 str. F0039] gi|288333301|gb|EFC71780.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon 299 str. F0039] Length = 436 Score = 186 bits (473), Expect = 6e-45, Method: Composition-based stats. Identities = 88/514 (17%), Positives = 176/514 (34%), Gaps = 100/514 (19%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL--KDNH-- 61 +N+ S+ +L+ + ++ + V EIS R + GH Y L KD Sbjct: 2 ENNNSQTHLSLYQLNNLVSEVISLSFNQDFWVEAEISEIREVR--GHCYIELIEKDEKMN 59 Query: 62 ---SRIDAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 ++ A W I+ + G++ L+ + + II + P Sbjct: 60 TPIAKASAKCWSNKWMFIKPHFERVTRQCLKAGMKVLLKVEAQFHEAFG-FAWIINYIDP 118 Query: 111 SG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC- 168 + G++ + L +G++ Q + +P K IAVI+S A D +Q + Sbjct: 119 TFTLGSMAKKRKDIIDALKAQGVYDLQKELYMPLFAKRIAVISSEGAAGYGDFMQHLVHN 178 Query: 169 --RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226 F V +F +QG+ + + +A+ +N + D++++ RGGG DL Sbjct: 179 EYGFVFEVALFNAVMQGEGIEQSVISALNAIN-----DKLSQFDVVVMIRGGGGTSDLSG 233 Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 F+ + IAN IP+I+ IGH+ D ++ D + + TPT AA+ + + S + Sbjct: 234 FDSLALAENIANFPIPVINGIGHDRDESVLDLISFEQVKTPTAAADYFINHALRVYSRID 293 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 L+ + + R +L RL ++ ++ ++ Sbjct: 294 TLQQYVVTYAQNR---------------------IELERNKLQRLAEKVPIVFSVVKTKQ 332 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + ++ R+ + I ++ + Q + Sbjct: 333 EGYIQQLLQRL-LIGMQSTITHQQRTVDMLDQRLNNA----------------------- 368 Query: 407 EQTKNRIFYLHTHIKKLITRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465 K + + L +I + ++ GY+ Sbjct: 369 --PKYILNSKQHRLTLLNEKIRSLDPQRILER-----------------------GYSIT 403 Query: 466 QDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 N + + L I F DG +I+ Sbjct: 404 LH-NGKSVLNAKELKKGDEITTKFKDGIITSIIK 436 >gi|167626295|ref|YP_001676795.1| exodeoxyribonuclease VII large subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167596296|gb|ABZ86294.1| Exodeoxyribonuclease VII [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 461 Score = 186 bits (472), Expect = 7e-45, Method: Composition-based stats. Identities = 94/506 (18%), Positives = 183/506 (36%), Gaps = 78/506 (15%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSG-HAYFSLKDNH-------SRIDA 66 +SE +K +E + + V E+S +R SG H Y L ++ ++I Sbjct: 7 LSEFLELIKSTIEMSFGYEGFWVVAELSEWR---RSGKHYYGELIEHDGVSKFPIAKIRC 63 Query: 67 IIWKGTLNKI--EF------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W + I +F + ++ L + + S + I + P+ G Sbjct: 64 NCWANKVEHIHSKFSQATGETLKTDMKVLFKVSVN-YHTSFGLSLNIIDIDPAFTLGDRQ 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRV 174 + + L + G+ +P +AVITS T A D ++ Sbjct: 123 ARKIEILQNLSKNGILEKNKVLNMPDDFTNVAVITSMTAAGKGDFFEEADKLQDLNLCNF 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 I+ K+QG EC K ++ A ++ T+ + D+I+L RGGGS DL FN+ + Sbjct: 183 DIYEAKMQGAECAKSVSIAFAKIATIAV-----KYDVIVLIRGGGSQADLDWFNNILPAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +I NS IP++ IGHE D T+ D R TP+ Sbjct: 238 SICNSEIPVLVGIGHERDSTVLDEICTKRFDTPSKVINYIA------------------- 278 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ IN + + + ++++LD L + +E +++ + +H Sbjct: 279 --NTIVDNAINAKYNYESIVRITKSLAKQNKHQLDNLYHNFKTRIEHYLYQMSQSVDH-- 334 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + ++ L K + + +K+ I Sbjct: 335 ------------------------NYKESTSIARGVSKLYDKTVNTMYENILLSSKSLIR 370 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 +I + + +K + + + + S + + TLKRG++ + + +IT Sbjct: 371 SYGNNIYNSYNQSTNTARNILKYYNQTSESLYKQILSVSIEPTLKRGFSLTKTIDGKYIT 430 Query: 475 QKRNLATKTRILINFFDGQANAIVIN 500 ++ + + I + DG V Sbjct: 431 TQKQAQAYSDLEIVYADGHIQVEVKE 456 >gi|314976375|gb|EFT20470.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL045PA1] Length = 415 Score = 186 bits (472), Expect = 7e-45, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G++ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMKVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVSPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|282878531|ref|ZP_06287312.1| exodeoxyribonuclease VII, large subunit [Prevotella buccalis ATCC 35310] gi|281299322|gb|EFA91710.1| exodeoxyribonuclease VII, large subunit [Prevotella buccalis ATCC 35310] Length = 431 Score = 186 bits (472), Expect = 9e-45, Method: Composition-based stats. Identities = 79/393 (20%), Positives = 155/393 (39%), Gaps = 30/393 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 ++ EL+ ++ +++ + + V E+S R + GH Y L KD ++ A Sbjct: 5 LTLFELNELVRETLQTTMPNEYWVEAELSEVREVR--GHCYMELVQKDERTNTPVAKASA 62 Query: 67 IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 WK + + G++ L+ + I+ + P G + Sbjct: 63 KCWKNKWMLMRPYFERTTGQVLRAGMKVLLKVYANFHEAYG-FSWIVTDIDPVYTMGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR---FPLRV 174 ++ +L EG+F Q + + +AVI+S A D L+++ F V Sbjct: 122 RRRQEIIAQLKAEGVFDLQKDLHLSMFARRVAVISSEQAAGYGDFLRQLKDCEQGFNFEV 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG+ + A+ +N + D++++ RGGG+ DL F+ + Sbjct: 182 QLFPAVMQGERVEPSVIEALNHINAQVDD-----FDVVVIIRGGGATSDLSGFDTLSLAE 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PII+ IGHE D ++ D + R TPT AA + + + + ++ + Sbjct: 237 NVANFPLPIITGIGHERDESVLDMVSFRRVKTPTAAAAYLIDNLADTLARINDAQSEMVQ 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 I+ ++++ N + +P + RL + +L I H + Sbjct: 297 IVRHCMEHQKNRFVRVSSKIPVLFSHVRVRQEERLQQYFLQLTARASRKISDSQHHVQVL 356 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 N +K I + QQ + + Q Sbjct: 357 SNSLKPMT-ERKIVTEGHRLDMLQQRCKSLDPQ 388 Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 43/137 (31%), Gaps = 4/137 (2%) Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 H ++ + + I + ++ L + +I H++ Sbjct: 299 RHCMEHQKNRFVRVSSKIPVLFSHVRVRQEERLQQYFLQLTA---RASRKISDSQHHVQV 355 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 L ++ + KI + + + + +S + L RGY+ + L T Sbjct: 356 LSNSLKPMTERKIVTEGHRLDMLQQRCKSLDPQLLLSRGYSITLH-QGRAVRHASELKTG 414 Query: 483 TRILINFFDGQANAIVI 499 I +G +I+ Sbjct: 415 DEIETRVENGTFKSIIK 431 >gi|265767769|ref|ZP_06095301.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_16] gi|263252441|gb|EEZ23969.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_16] Length = 410 Score = 186 bits (471), Expect = 9e-45, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L V+ E+S R S+GH Y F KD ++ Sbjct: 5 LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV + Y + ++ + P+ G + Sbjct: 64 TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + ++L EEG+ + + +P +P+ IAVI+S T A D ++ F R Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ +N + D++++ RGGG+ DL F+ ++ Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + E L L L+ Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHT 297 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L L +P+ + LS SR +L L H E ++ R++ + Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKNNLSHAAETLLARQHHRLELL 357 Query: 354 INRIKSDFLIHNIQK 368 NRI +++ Sbjct: 358 QNRIADASPQKLLKR 372 Score = 97.1 bits (240), Expect = 6e-18, Method: Composition-based stats. Identities = 13/133 (9%), Positives = 43/133 (32%), Gaps = 1/133 (0%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + + E++ + + E++ + + Q ++ ++ Sbjct: 278 IDRMEEAADRLGALAEELHTRVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKN 337 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + H + + + + + LKRGY+ + + L + Sbjct: 338 NLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQPGDEL 396 Query: 486 LINFFDGQANAIV 498 + ++G+ + V Sbjct: 397 ITRLYEGEVKSRV 409 >gi|299530082|ref|ZP_07043509.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni S44] gi|298722062|gb|EFI62992.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni S44] Length = 200 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 56/198 (28%), Positives = 102/198 (51%), Gaps = 2/198 (1%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 + V L + + +++ + V VRGE+SG+ +SGH YF+LKD +I +++ Sbjct: 2 WEVGALCHAIGDALQARFNPVAVRGELSGF-SRAASGHCYFNLKDASGQIRCAMFRRAAE 60 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 ++ F P +G V G++ + Q+++ES+ +G G L + K +L EGLF Sbjct: 61 QVGFSPRDGELVEVRGRLGVYEQRGDLQLVVESMQRAGQGALFEQFLRLKAQLESEGLFD 120 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 K +P +P+ I ++TS A + D++ + R P + V+I P VQG + P+ + A Sbjct: 121 PARKRSLPPLPRGIGLVTSLGAAALHDVVTALRRRVPHIPVVIVPALVQGLQAPQSLVQA 180 Query: 194 ILQLNTLKEGRTCPRPDI 211 + +L L + D+ Sbjct: 181 LSKLYLLTQEGQDASGDL 198 >gi|53715283|ref|YP_101275.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis YCH46] gi|52218148|dbj|BAD50741.1| putative exodeoxyribonuclease VII large subunit [Bacteroides fragilis YCH46] gi|301164738|emb|CBW24297.1| putative exodeoxyribonuclease VII large subunit [Bacteroides fragilis 638R] Length = 410 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L V+ E+S R S+GH Y F KD ++ Sbjct: 5 LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV + Y + ++ + P+ G + Sbjct: 64 TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + ++L EEG+ + + +P +P+ IAVI+S T A D ++ F R Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ +N + D++++ RGGG+ DL F+ ++ Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + E L L L+ Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHT 297 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L L +P+ + LS SR +L L H E ++ R++ + Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELL 357 Query: 354 INRIKSDFLIHNIQK 368 NRI +++ Sbjct: 358 QNRIADASPQKLLKR 372 Score = 96.7 bits (239), Expect = 9e-18, Method: Composition-based stats. Identities = 13/133 (9%), Positives = 44/133 (33%), Gaps = 1/133 (0%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + + E++ + + E++ + + Q ++ ++ + Sbjct: 278 IDRMEEAADRLGALAEELHTRVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKS 337 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + H + + + + + LKRGY+ + + L + Sbjct: 338 NLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQPGDEL 396 Query: 486 LINFFDGQANAIV 498 + ++G+ + V Sbjct: 397 ITRLYEGEVKSRV 409 >gi|60683219|ref|YP_213363.1| exodeoxyribonuclease VII large subunit [Bacteroides fragilis NCTC 9343] gi|60494653|emb|CAH09454.1| putative exodeoxyribonuclease VII large subunit [Bacteroides fragilis NCTC 9343] Length = 410 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L V+ E+S R S+GH Y F KD ++ Sbjct: 5 LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV + Y + ++ + P+ G + Sbjct: 64 TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + ++L EEG+ + + +P +P+ IAVI+S T A D ++ F R Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ +N + D++++ RGGG+ DL F+ ++ Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + E L L L+ Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHT 297 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L L +P+ + LS SR +L L H E ++ R++ + Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELL 357 Query: 354 INRIKSDFLIHNIQK 368 NRI +++ Sbjct: 358 QNRIADASPQKLLKR 372 Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 13/133 (9%), Positives = 45/133 (33%), Gaps = 1/133 (0%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + + E++ + + E++ + + Q ++ ++ + Sbjct: 278 IDRMEEAADRLGALAEELHTRVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKS 337 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 + + H + + + + + LKRGY+ + + L + + Sbjct: 338 NLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQSGDEL 396 Query: 486 LINFFDGQANAIV 498 + ++G+ + V Sbjct: 397 ITRLYEGEVKSRV 409 >gi|145640356|ref|ZP_01795940.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae R3021] gi|145274942|gb|EDK14804.1| exodeoxyribonuclease VII large subunit [Haemophilus influenzae 22.4-21] Length = 284 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 56/336 (16%) Query: 166 ISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDL 224 ++ R P L+V+I+P VQG E EI I N +E D++I+ RGGGS+EDL Sbjct: 1 MARRDPSLKVVIYPTAVQGKEATAEIVQMIELANVRQE------VDVLIVGRGGGSLEDL 54 Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284 W FN+E + RAI S++PIISA+GHETD T+AD+ ADLRAPTP+ AAE+ ++ L Sbjct: 55 WCFNEEEVARAIFRSTLPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRNQDELLQQ 114 Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEHNLEII 342 L + + RL+ RL K L + L + L + + ++L L+ + Sbjct: 115 LRHQQQRLDMAFDRLFTRKSQRLKQITLRLHNQHPQNQLRVQQAKNEQLTHRLQLAMLRQ 174 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + F + +R+K + L + +Q+++Q + + Q Sbjct: 175 FENTQQKFTALSSRLKQNPLPYRVQRHQQRLEQLQVR----------------------- 211 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462 + F ++ ++ C ++ L + L RGY Sbjct: 212 ------------------------LNFCVNRQVTECQNKLATLCGKLDGLSPLKVLARGY 247 Query: 463 TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 + +++ I +++ I DG+ + V Sbjct: 248 SIAENSQGKAIVSVKDVNQGDFITTQVADGKIVSKV 283 >gi|294672950|ref|YP_003573566.1| exodeoxyribonuclease VII large subunit [Prevotella ruminicola 23] gi|294471813|gb|ADE81202.1| exodeoxyribonuclease VII, large subunit [Prevotella ruminicola 23] Length = 411 Score = 185 bits (470), Expect = 1e-44, Method: Composition-based stats. Identities = 79/374 (21%), Positives = 156/374 (41%), Gaps = 31/374 (8%) Query: 16 SVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAI 67 ++ EL+ ++ +E L V E+S R S GH Y L KD ++ A Sbjct: 8 TLFELNRLVREAIEDALPMEYWVEAELSECRE--SRGHCYMELIQKDEQTATPIAKASAK 65 Query: 68 IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118 W I G++ L+ + I+ + P+ G + Sbjct: 66 CWANKWLTIRPYFERTTGQQLHAGMKVLLQVYPQFHEAYG-FSWIVTDIDPTYTLGDMAR 124 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175 ++ +KL EG+F Q + +P + IAVI+S T A D +++ F Sbjct: 125 KRQEIIQKLKAEGVFDLQKELQLPVFCQRIAVISSQTAAGYGDFCNQLADNPYGFKFETQ 184 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 +FP +QG+ + I +A+ Q+ + D +++ RGGG+ D+ F+ + Sbjct: 185 LFPAIMQGEGVEQSIISALEQIYDMP-------FDCVVIIRGGGATSDMSGFDTLALAEN 237 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +AN IPII+ IGHE D ++ D + R TPT AA + + + + ++ ++ + + Sbjct: 238 VANFPIPIITGIGHERDESILDMISHTRVKTPTAAAALLIDHLKGVLETIEGAQSMITHY 297 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + L+ + +A+P + + ++D L L +E + + Sbjct: 298 VQQKFSIANSQLSIISEAIPRLFSIVKTRQEAKIDALYTRLPMLIERRFTSERHRLQLMD 357 Query: 355 NRIKSDFLIHNIQK 368 ++K+ + + Sbjct: 358 EKLKALDPTLLLAR 371 Score = 90.6 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 44/122 (36%), Gaps = 2/122 (1%) Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT-HIKKLITRIEFILSHKIKSCH 439 + ++ +++ F +++I+ + + + I L TR+ ++ + S Sbjct: 291 QSMITHYVQQKFSIANSQLSIISEAIPRLFSIVKTRQEAKIDALYTRLPMLIERRFTSER 350 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 + + L++ L RGY+ N + L I G ++++ Sbjct: 351 HRLQLMDEKLKALDPTLLLARGYSITMH-NGRAVKDASQLPPGAEIETRLAKGTIHSVIK 409 Query: 500 NK 501 + Sbjct: 410 SV 411 >gi|253567174|ref|ZP_04844624.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 3_2_5] gi|251944005|gb|EES84524.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 3_2_5] Length = 410 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 95/375 (25%), Positives = 167/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L V+ E+S R S+GH Y F KD ++ Sbjct: 5 LSLYELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFVQKDPRSNNLIAKARG 63 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV + Y + ++ + P+ G + Sbjct: 64 TIWANIYRLLKPYFEESTGQLFTSGIKVLVKVTVAFHELYG-YSLTVQDIDPTYTLGDMA 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + ++L EEG+ + + +P +P+ IAVI+S T A D ++ F R Sbjct: 123 RRRREILRQLEEEGVLTLNKELEMPLLPQRIAVISSATAAGYGDFCHQLQHNPRGFYFRT 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ +N + D++++ RGGG+ DL F+ ++ Sbjct: 183 ELFPALMQGNQVEESVLAALDAVNARVDE-----FDVVVIIRGGGATSDLSGFDTYLLAA 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + E L L L+ Sbjct: 238 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIDRMEEAADRLGALAEELHA 297 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L L +P+ + LS SR +L L H E ++ R++ + Sbjct: 298 RVFYRLEQERRRLALLQARIPSQVMRKLSESRIKLQMAKSNLSHAAETLLARQHHRLELL 357 Query: 354 INRIKSDFLIHNIQK 368 NRI +++ Sbjct: 358 QNRIADASPQKLLKR 372 Score = 93.3 bits (230), Expect = 1e-16, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LI +++ + + + V + E++ + + Q ++ + Sbjct: 276 LLIDRMEEAADRLGALAEELHARVFYR---LEQERRRLALLQARIPSQVMRKLSESRIKL 332 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + H + + + + + LKRGY+ + + L Sbjct: 333 QMAKSNLSHAAETLLARQHHRLELLQNRIADASPQKLLKRGYSITL-KDGKAVKSAACLQ 391 Query: 481 TKTRILINFFDGQANAIV 498 + ++ ++G+ + V Sbjct: 392 SGDELITRLYEGEVMSRV 409 >gi|213619224|ref|ZP_03373050.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 291 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 56/342 (16%) Query: 165 RISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 + R P L VII+P VQGD+ P +I AI NT E D++I+ RGGGS+ED Sbjct: 1 MLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLED 54 Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283 LW FNDE + RAI S IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+ ++ L Sbjct: 55 LWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLR 114 Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEI 341 + + + RL + + + + L L +R + +RL + + LE Sbjct: 115 QIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEA 174 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 I + + + R+ I + + I + + Sbjct: 175 RIKQATQRQQRVSQRLSQQNPQPRIHRVQSRIQQLEYR---------------------- 212 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 + + ++ L++ + TL RG Sbjct: 213 -------------------------LTENIRSRLSEQRERFGNAVTHLEAVSPLATLARG 247 Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 YT T+ + + + + + DG + V + P Sbjct: 248 YTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 289 >gi|328752563|gb|EGF66179.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL020PA1] Length = 415 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPHGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 86.0 bits (211), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|319900023|ref|YP_004159751.1| Exodeoxyribonuclease VII large subunit [Bacteroides helcogenes P 36-108] gi|319415054|gb|ADV42165.1| Exodeoxyribonuclease VII large subunit [Bacteroides helcogenes P 36-108] Length = 411 Score = 185 bits (469), Expect = 2e-44, Method: Composition-based stats. Identities = 89/375 (23%), Positives = 166/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ +L+ ++H +E L V+ E+S R S+GH Y F KD ++ Sbjct: 4 LSLYDLNALVRHSIEQCLPDEFWVQAELSDVRTN-STGHCYLEFVQKDLRSNNLIAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +W ++ EE GI+ LV + Y ++++ + P+ G + Sbjct: 63 TVWANVFRLLKPYFEETTGQAFVAGIKVLVQVTVNFHELYG-YSLVVQDIDPTYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 ++ K+L EEG+ + + IP +P+ IA+I+SPT A D ++ F Sbjct: 122 RRRKEILKQLEEEGVLTLNKELEIPRLPQHIAIISSPTAAGYGDFCHQLQNNPRGFYFYT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG+ + + A+ +N D++++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGERVEESVLAALDNINARLSE-----FDVVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AA + L L RL Sbjct: 237 ACAQFPLPIITGIGHERDDTVIDSVAHTRVKTPTAAAGFLTECMNNAADELDLLAGRLQE 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + L+ ++ + L + ++P++ + +S ++ L R++E + + R + + Sbjct: 297 GVRNLLMHERHKLFAYKNSIPSAAYRRISEAKLALLTAHRDIEQTVTSFLSRHHHRLELL 356 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 357 QQRLADASPEKQLAR 371 Score = 84.4 bits (207), Expect = 5e-14, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 50/138 (36%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 FL + + +++ V+ + E+ + A + + RI + Sbjct: 275 FLTECMNNAADELDLLAGRLQEGVRN---LLMHERHKLFAYKNSIPSAAYRRISEAKLAL 331 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 IE ++ + H + + + L + + L RGY+ + + + L Sbjct: 332 LTAHRDIEQTVTSFLSRHHHRLELLQQRLADASPEKQLARGYSITL-KDGKVVKNAKLLR 390 Query: 481 TKTRILINFFDGQANAIV 498 T I+ ++G+ +IV Sbjct: 391 TDDEIVTRLYEGELTSIV 408 >gi|295130138|ref|YP_003580801.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes SK137] gi|291375409|gb|ADD99263.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes SK137] gi|313771468|gb|EFS37434.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL074PA1] gi|313811405|gb|EFS49119.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL083PA1] gi|313830840|gb|EFS68554.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL007PA1] gi|313833268|gb|EFS70982.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL056PA1] gi|314973728|gb|EFT17824.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL053PA1] gi|314983342|gb|EFT27434.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL005PA1] gi|315080213|gb|EFT52189.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL078PA1] gi|315096503|gb|EFT68479.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL038PA1] gi|327326753|gb|EGE68536.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL096PA2] gi|327443046|gb|EGE89700.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL043PA1] gi|327445169|gb|EGE91823.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL043PA2] gi|328760252|gb|EGF73825.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL099PA1] Length = 415 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVSPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|314966297|gb|EFT10396.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL082PA2] Length = 415 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPIVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAEGRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|261879227|ref|ZP_06005654.1| exodeoxyribonuclease VII [Prevotella bergensis DSM 17361] gi|270334176|gb|EFA44962.1| exodeoxyribonuclease VII [Prevotella bergensis DSM 17361] Length = 432 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 84/398 (21%), Positives = 170/398 (42%), Gaps = 30/398 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NH 61 + ++ EL+ ++ ++E+ LS V E+S GH Y L KD Sbjct: 1 MSQTRLTLFELNSLVRGVLETTLSSAYWVEAELSE--AREVRGHCYMELIQKDLFSATPV 58 Query: 62 SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 +R A WK ++ E+ G++ L++ + + I++ + P+ Sbjct: 59 ARASAKCWKTQWTRLRPKFEQITGQPLHAGMKVLLLVTVNFHEAYG-FSWIVQDIDPTYT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCR 169 G + + ++L E+G+F Q + IP + IAVI+S A D ++ Sbjct: 118 MGDMARKRLEIIRQLKEQGIFDMQKELSIPMFAQRIAVISSEHAAGYGDFCNQLETNDYG 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 F +FP +QG++ I A+ +N + D +++ RGGG+ D+ F+ Sbjct: 178 FVFYPKLFPAVMQGEQVEHSIIAALNDINAQAQQ-----FDAVVIIRGGGATADMSGFDT 232 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 ++ +AN +P+I+ IGHE D ++ D ++ R TPT AA + ++ + + N + Sbjct: 233 LLLAENVANFPLPVITGIGHERDESILDMVSNTRVKTPTAAAAFLIGNLANVWTHIGNCQ 292 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYR 348 R+ + + ++ + N LN +P + + RLDRL ++ + + + Sbjct: 293 DRIVTCVGQRMERQRNRLNRCADRIPMLFSLVKTRQEARLDRLAAQMVSLIGNRLTQNRH 352 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 I I+ + I + H+ + ++ + Sbjct: 353 RLQLICTNIRP-AIARRITRENNHLEQLDIRLKALDPH 389 Score = 95.2 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 4/135 (2%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +++ R + I + A + L NR+ ++ + Sbjct: 301 QRMERQRNRLNRCADRIPMLFSLVKTRQEARLDRLAAQMVSL---IGNRLTQNRHRLQLI 357 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKT 483 T I ++ +I + + L++ LKRGY+ + + Sbjct: 358 CTNIRPAIARRITRENNHLEQLDIRLKALDPHTLLKRGYSITLHK-GKAVRDVSEVKAGD 416 Query: 484 RILINFFDGQANAIV 498 I +G+ +IV Sbjct: 417 EIETQVENGRIISIV 431 >gi|313808128|gb|EFS46602.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL087PA2] Length = 415 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQTRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQTRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|314922867|gb|EFS86698.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL001PA1] gi|315093462|gb|EFT65438.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL060PA1] gi|315103018|gb|EFT74994.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL050PA2] gi|327327078|gb|EGE68859.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL103PA1] Length = 415 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAEGRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|282854463|ref|ZP_06263800.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes J139] gi|282583916|gb|EFB89296.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes J139] Length = 417 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 3 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 59 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 60 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 118 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 119 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 178 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 179 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 232 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 233 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 292 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 293 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAEGRDVNHMLERVR 352 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 353 AMSPKATLDRGYAILADTE 371 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 271 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 328 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 329 LRLATHRVLDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 388 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 389 VYLSDGTLSVTVDSLDRRTPNRPT 412 >gi|50842055|ref|YP_055282.1| exodeoxyribonuclease VII large subunit [Propionibacterium acnes KPA171202] gi|289425830|ref|ZP_06427584.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes SK187] gi|289426773|ref|ZP_06428501.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes J165] gi|50839657|gb|AAT82324.1| exodeoxyribonuclease VII large subunit [Propionibacterium acnes KPA171202] gi|289153773|gb|EFD02480.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes SK187] gi|289160099|gb|EFD08275.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes J165] gi|313764001|gb|EFS35365.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL013PA1] gi|313791657|gb|EFS39775.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL110PA1] gi|313802256|gb|EFS43482.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL110PA2] gi|313812588|gb|EFS50302.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL025PA1] gi|313814872|gb|EFS52586.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL059PA1] gi|313818895|gb|EFS56609.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL046PA2] gi|313820722|gb|EFS58436.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL036PA1] gi|313822511|gb|EFS60225.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL036PA2] gi|313825693|gb|EFS63407.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL063PA1] gi|313828035|gb|EFS65749.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL063PA2] gi|313839024|gb|EFS76738.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL086PA1] gi|314915033|gb|EFS78864.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL005PA4] gi|314918636|gb|EFS82467.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL050PA1] gi|314920444|gb|EFS84275.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL050PA3] gi|314925637|gb|EFS89468.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL036PA3] gi|314932118|gb|EFS95949.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL067PA1] gi|314954616|gb|EFS99022.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL027PA1] gi|314958585|gb|EFT02687.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL002PA1] gi|314959811|gb|EFT03913.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL002PA2] gi|314962384|gb|EFT06485.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL082PA1] gi|314968345|gb|EFT12444.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL037PA1] gi|314979194|gb|EFT23288.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL072PA2] gi|314986748|gb|EFT30840.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL005PA2] gi|314989490|gb|EFT33581.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL005PA3] gi|315077470|gb|EFT49530.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL053PA2] gi|315084096|gb|EFT56072.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL027PA2] gi|315085298|gb|EFT57274.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL002PA3] gi|315089087|gb|EFT61063.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL072PA1] gi|315098910|gb|EFT70886.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL059PA2] gi|315100850|gb|EFT72826.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL046PA1] gi|315107212|gb|EFT79188.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL030PA1] gi|327330550|gb|EGE72297.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL096PA3] gi|327450150|gb|EGE96804.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL087PA3] gi|327455123|gb|EGF01778.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL092PA1] gi|327455293|gb|EGF01948.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL083PA2] gi|328752815|gb|EGF66431.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL087PA1] gi|328759261|gb|EGF72877.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL025PA2] gi|332674978|gb|AEE71794.1| exodeoxyribonuclease 7 large subunit [Propionibacterium acnes 266] Length = 415 Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|327331079|gb|EGE72819.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL097PA1] Length = 415 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|314980824|gb|EFT24918.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL110PA3] gi|315090289|gb|EFT62265.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL110PA4] Length = 415 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 101/379 (26%), Positives = 174/379 (45%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEVTRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 ++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TSVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L + + N TL + RLD + L I+ + R NH++ R++ Sbjct: 291 DVESGHLTQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRILDAEGRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLTQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRILDAEGRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTTARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|332295325|ref|YP_004437248.1| exodeoxyribonuclease VII, large subunit [Thermodesulfobium narugense DSM 14796] gi|332178428|gb|AEE14117.1| exodeoxyribonuclease VII, large subunit [Thermodesulfobium narugense DSM 14796] Length = 459 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 97/496 (19%), Positives = 193/496 (38%), Gaps = 73/496 (14%) Query: 11 DHPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL---KDNH--SRI 64 ++ ++ EL+ ++++++ N S + + EIS ++SG L KD+ ++ Sbjct: 3 NNRFLTLYELNLLIQNVIKDNFESDILLTAEISRIV-YNASGFVSIELIEKKDDQIIAKN 61 Query: 65 DAIIWKGTLNKIEF-------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTL 116 A+IW I+ EG++ L K+ + S + I ++ PS G + Sbjct: 62 RALIWNDKKFIIDVFETIVGEKLSEGMKILAKVKV-LYHPSYGLTLNILNIDPSYTIGEM 120 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRFPLR 173 KL EGL + P+ IA+I+S + A D ++ + + Sbjct: 121 QLKKNNILSKLKNEGLLELNKALELSIAPQNIALISSESAAGYEDFIRHLIYNEKGYAFN 180 Query: 174 VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV 233 V +FP +QG + I ++ + +++++ RGGGS+ +L FN + Sbjct: 181 VKLFPSVMQGKDVESSIIRSLDAI------AEYRNFEVVVIVRGGGSVGELDCFNSYNLA 234 Query: 234 RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLN 293 + IA IP++ IGH+ D T+ D+ A PT A Sbjct: 235 KKIAKFPIPVLVGIGHDRDKTILDFVAYEGFKNPTAVAHFL------------------- 275 Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 I R+ ++ + + L K S + + ++R+ ++ + N+I Sbjct: 276 --INRVEDFENDLKDRLYKIFSLSSEKVDKETKIVERISIRIKEKALESLSVSKSSINYI 333 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 NRI DFL R I EK++ IL + + ++ Sbjct: 334 GNRIFPDFL--------------------------RRIGQEKRKNDKILFNIFSKLNEKV 367 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFI 473 ++ ++ R++ K++ V+ + ++ + LKRG++ N I Sbjct: 368 RNEYSFLQGKEYRLKNEAFAKLQENKNLVTNFEKEIRLKDPREILKRGFSITTL-NGKTI 426 Query: 474 TQKRNLATKTRILINF 489 ++ + IL +F Sbjct: 427 KNYEDVKEGSNILTHF 442 >gi|315108068|gb|EFT80044.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL030PA2] Length = 415 Score = 183 bits (465), Expect = 5e-44, Method: Composition-based stats. Identities = 100/379 (26%), Positives = 175/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P D+I++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDVIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 ++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TSVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|327446887|gb|EGE93541.1| exodeoxyribonuclease VII, large subunit [Propionibacterium acnes HL013PA2] Length = 415 Score = 183 bits (465), Expect = 5e-44, Method: Composition-based stats. Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 15/379 (3%) Query: 4 FSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NH 61 + N+ D+P S++ + +K VE + V+ ++ SS + +L+D Sbjct: 1 MVEPNAADNPR-SLAWVVNAVKGWVERC-GAIWVQAQVIEITRR-SSPTQFLTLRDPIEE 57 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 A + L+ E G+ + + T + + + I + P+G G LL LE Sbjct: 58 ISASATCHRRVLDAAG-PIETGMTVTALIRPTVWSRTGRLSFEISEITPTGEGQLLAQLE 116 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVK 180 +RK+ L EGLF PIP +P+ I +IT RD+ + + R+P R ++ + Sbjct: 117 RRKRLLEAEGLFDVTLHRPIPVLPRGIGLITGAGSDAERDVQRHATLRWPAARFVVHNTR 176 Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 VQG A + L + P DII++ARGGG +EDL F+DE +VRA+ + Sbjct: 177 VQGP------MAAQQIIAALADLDADPTVDIIVIARGGGPLEDLLPFSDEALVRAVYATR 230 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 P++SAIGH+ D + D ADLRA TPT A ++ VP ++ A+L + R I Sbjct: 231 TPVVSAIGHDRDNPILDLVADLRASTPTDAGKLIVPDAAEQSQAIETARAQLRQAVTRFI 290 Query: 301 KYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L+ + + N TL + RLD + L ++ + R NH++ R++ Sbjct: 291 DVESGHLSQIRSRPVMVNPAATLDIAVERLDSTLQRLRLATHRVLDAESRDVNHMLERVR 350 Query: 359 SDFLIHNIQKNRQHILEKQ 377 + + + + + + Sbjct: 351 AMSPKATLDRGYAILADTE 369 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + Q I + + Q V + + + + M+ + + + R Sbjct: 269 AEQSQAIETARAQLRQAVTRFIDVESGHLSQIRSRPVMV--NPAATLDIAVERLDSTLQR 326 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 + + + V+ +++ + K TL RGY + DT + IT + + +L Sbjct: 327 LRLATHRVLDAESRDVNHMLERVRAMSPKATLDRGYAILADTEGDSITSVNDTNARANLL 386 Query: 487 INFFDGQANAIVINKAPPKEQPTK 510 + DG + V + Sbjct: 387 VYLSDGTLSVTVDSLDRRTPNRPT 410 >gi|227499440|ref|ZP_03929551.1| possible exodeoxyribonuclease VII [Anaerococcus tetradius ATCC 35098] gi|227218502|gb|EEI83745.1| possible exodeoxyribonuclease VII [Anaerococcus tetradius ATCC 35098] Length = 394 Score = 183 bits (464), Expect = 6e-44, Method: Composition-based stats. Identities = 108/372 (29%), Positives = 176/372 (47%), Gaps = 16/372 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV + + + K ++ + ++ + G+++ R +S H YFSLK++ ID +I+ Sbjct: 5 LSVKQFNEYFKSNIKHDPIFQNLYINGQLANIRINNS--HLYFSLKEDTDIIDCVIYYYE 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPG-SSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 ++F E G + LV G + + SS+ I+ ++ G K K++ ++G Sbjct: 63 DKAVDFDFEVGKDILVRGNV-LYNNYSSRIVIVANEVVEKGISDNYLQFIKMKEEFRKKG 121 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEI 190 F +K I P I +ITS GA I D L I+ + + + ++PVKVQG + I Sbjct: 122 YFDISNKKEISQYPNKIGLITSQEGAAIVDFLSVINQKPNDIHIYLYPVKVQGTDSSLMI 181 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 + A+ L+ D+I++ RGGGS EDL FND ++ A+ ++ PIISAIGH+ Sbjct: 182 SKAVRSLDK-------KGLDLIVITRGGGSNEDLNSFNDRAVIEAVFDAKTPIISAIGHK 234 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 D TL D ADL TPT A V +L+ + N+ ++ I+ IK L L Sbjct: 235 IDQTLLDLVADLSLQTPTEAGSYLVKSYSNLERDMKNILDQIKGILNDRIKSYEFDLVKL 294 Query: 311 LKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L N TL L L ++L+ ++ I + + +K I I K Sbjct: 295 KLELDKYNPSFTLKEKMRELLYLKKDLDLKIQANITYNEQKIKLLYKDLKRFEDIIEISK 354 Query: 369 NRQHILEKQQHI 380 HI + +Q I Sbjct: 355 KNIHIKDIKQEI 366 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 14/36 (38%) Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 I+D I L K + I F DG VI+ Sbjct: 359 IKDIKQEIIFSAHQLKVKDKAYIEFSDGIVKVEVID 394 >gi|329963137|ref|ZP_08300917.1| Exonuclease VII, large subunit [Bacteroides fluxus YIT 12057] gi|328529178|gb|EGF56108.1| Exonuclease VII, large subunit [Bacteroides fluxus YIT 12057] Length = 416 Score = 183 bits (464), Expect = 6e-44, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ +L+ ++ +E L V+ E+S R ++ GH Y F KD ++ Sbjct: 6 LSLYDLNALVRRSIEQCLPDEFWVQAELSDVRTGNT-GHCYLEFVQKDPRGNNLIAKARG 64 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +W ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 65 TVWANVFRLLKPYFEEATGQAFVAGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 123 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + K+L EEG+ + + +P +P+ IAVI+SPT A D ++ F Sbjct: 124 RRRREILKQLEEEGVLTLNKELEMPRLPQRIAVISSPTAAGYGDFCHQLQNNPRGFCFYT 183 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD + + +A+ ++N P D +++ RGGG+ DL F+ ++ Sbjct: 184 ELFPALMQGDRVEESVLSALDKINARL-----PEFDAVVIIRGGGATSDLSGFDTYLLAA 238 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AAE + + L L ARL Sbjct: 239 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIDSMNNAADELEMLAARLQE 298 Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + + + L + +P++ + +S ++ L +++ + + R + Sbjct: 299 SVRTRLLQEQRKLAAYRDRIPSAAYRRISAAKLALLTARKDMAQVVTSSLSRHRHRLELL 358 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 359 QQRLADVSPEKQLAR 373 Score = 92.9 bits (229), Expect = 1e-16, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 FLI ++ + +++ V+ + E+++ A + RI + Sbjct: 277 FLIDSMNNAADELEMLAARLQESVRTR---LLQEQRKLAAYRDRIPSAAYRRISAAKLAL 333 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + +++ + + + + L + + L RGY+ + + L Sbjct: 334 LTARKDMAQVVTSSLSRHRHRLELLQQRLADVSPEKQLARGYSITL-KDGKVVKDAGLLR 392 Query: 481 TKTRILINFFDGQANAIV 498 I G+A +I+ Sbjct: 393 EGDEITTRLHKGEATSII 410 >gi|328479788|gb|EGF48905.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus MTCC 5462] Length = 176 Score = 183 bits (464), Expect = 7e-44, Method: Composition-based stats. Identities = 78/181 (43%), Positives = 123/181 (67%), Gaps = 8/181 (4%) Query: 51 GHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 G+ YFSLKD+H++I A++++ +K++F EEG++ LV+G+++ + S +Y++I+E L P Sbjct: 2 GNQYFSLKDDHAKIGALMFRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEP 61 Query: 111 SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170 G G L A E+ KKKL EGLF H+ P+P PK +AV+TSP+GAVI+DI+ ++ R+ Sbjct: 62 DGVGALYQAFEQLKKKLAAEGLFER-HQRPLPLFPKRVAVVTSPSGAVIQDIITTVARRY 120 Query: 171 PL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 P+ ++ +FP VQGD+ I + ++ T+ D +I+ RGGGSIEDLW FN+ Sbjct: 121 PILQLTLFPAIVQGDQAADSIVKQLNRIETMS------GFDAVIIGRGGGSIEDLWPFNE 174 Query: 230 E 230 E Sbjct: 175 E 175 >gi|255326921|ref|ZP_05367997.1| exodeoxyribonuclease VII, large subunit [Rothia mucilaginosa ATCC 25296] gi|255296138|gb|EET75479.1| exodeoxyribonuclease VII, large subunit [Rothia mucilaginosa ATCC 25296] Length = 433 Score = 183 bits (464), Expect = 8e-44, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 15/371 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + ++ L+ +LK+ V+ + V +++ G G+ + LKD Sbjct: 26 PGKSQETTATNPWPLALLAQNLKNYVDKV-PELWVEAQVASLNGR--GGNVFMELKDLNE 82 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++ + + G + K + + + K +I + + G+G L L Sbjct: 83 DFSFTLALFGRAGSGLAADVTVGARIVTRAKPSLW-KNGKLSLIGKEVYAVGTGNLHEQL 141 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 ++ ++ L EGLFSD K P+P +P + +IT +D+++ S R+P + + Sbjct: 142 QRLREALAAEGLFSDARKKPLPMLPNRVGLITGRDSDAEKDVIRNASLRWPGVVFEVRNT 201 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ + L E P D+I++ARGGGS EDL F++E ++RA+A + Sbjct: 202 RVQGEGAAA------EVIAALAELDAHPEVDVIVIARGGGSFEDLLPFSEEALIRAVAAA 255 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 + P++SAIGHE D + D ADLRA TPT A + VP + + ARL+ ++ Sbjct: 256 TTPVVSAIGHEADSPILDAVADLRASTPTDAGKRIVPDISEETARITEARARLDRAVLGY 315 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + ++N + L L + + +L L +L +++ + R+ +H + R+ Sbjct: 316 VGMQMNYIAQLRSRPVLTHPESSLLMRVEELSQLRERAHRSVQHRLERESATLSHTLARV 375 Query: 358 KSDFLIHNIQK 368 +S + + Sbjct: 376 RSLSPAQTLNR 386 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 2/139 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + I E + +++ V ++ + + + ++ + + +L Sbjct: 294 ISEETARITEARARLDRAVLGYVGMQMNYIAQLRSR--PVLTHPESSLLMRVEELSQLRE 351 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R + H+++ ++S T ++S + TL RGY+ +QD + L+ +I Sbjct: 352 RAHRSVQHRLERESATLSHTLARVRSLSPAQTLNRGYSIVQDAAGAIVRDASALSKGEQI 411 Query: 486 LINFFDGQANAIVINKAPP 504 + G A A V + P Sbjct: 412 TVRAATGSAQATVTSTDPS 430 >gi|283457632|ref|YP_003362216.1| exonuclease VII, large subunit [Rothia mucilaginosa DY-18] gi|283133631|dbj|BAI64396.1| exonuclease VII, large subunit [Rothia mucilaginosa DY-18] Length = 447 Score = 183 bits (463), Expect = 1e-43, Method: Composition-based stats. Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 15/371 (4%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + ++ L+ +LK+ V+ + V +++ G G+ + LKD Sbjct: 40 PGKSQETTATNPWPLALLAQNLKNYVDKV-PELWVEAQVASLNGR--GGNVFMELKDLNE 96 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 ++ + + G + K + + + K +I + + G+G L L Sbjct: 97 DFSFTLALFGRAGSGLAADVTVGARIVTRAKPSLW-KNGKLSLIGKEVYAVGTGNLHEQL 155 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 ++ ++ L EGLFSD K P+P +P + +IT +D+++ S R+P + + Sbjct: 156 QRLREALAAEGLFSDARKKPLPMLPNRVGLITGRDSDAEKDVIRNASLRWPGVVFEVRNT 215 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 +VQG+ + L E P D+I++ARGGGS EDL F++E ++RA+A + Sbjct: 216 RVQGEGAAA------EVIAALAELDAHPEVDVIVIARGGGSFEDLLPFSEEALIRAVAAA 269 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 + P++SAIGHE D + D ADLRA TPT A + VP + + ARL+ ++ Sbjct: 270 TTPVVSAIGHEADSPILDAVADLRASTPTDAGKRIVPDISEETARITEARARLDRAVLGY 329 Query: 300 IKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + ++N + L L + + +L L +L +++ + R+ +H + R+ Sbjct: 330 VGMQMNYIAQLRSRPVLTHPESSLLMRVEELSQLRERAHRSVQHRLERESATLSHTLARV 389 Query: 358 KSDFLIHNIQK 368 +S + + Sbjct: 390 RSLSPAQTLNR 400 Score = 103 bits (256), Expect = 8e-20, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 2/139 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 I + I E + +++ V ++ + + + ++ + + +L Sbjct: 308 ISEETARITEARARLDRAVLGYVGMQMNYIAQLRSR--PVLTHPESSLLMRVEELSQLRE 365 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R + H+++ ++S T ++S + TL RGY+ +QD + L+ +I Sbjct: 366 RAHRSVQHRLERESATLSHTLARVRSLSPAQTLNRGYSIVQDAAGAIVRDASALSEGEQI 425 Query: 486 LINFFDGQANAIVINKAPP 504 + G A A V + P Sbjct: 426 TVRAATGSAQATVTSTDPS 444 >gi|257066524|ref|YP_003152780.1| exodeoxyribonuclease VII, large subunit [Anaerococcus prevotii DSM 20548] gi|256798404|gb|ACV29059.1| exodeoxyribonuclease VII, large subunit [Anaerococcus prevotii DSM 20548] Length = 394 Score = 182 bits (462), Expect = 1e-43, Method: Composition-based stats. Identities = 104/366 (28%), Positives = 167/366 (45%), Gaps = 14/366 (3%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV + + + K ++ + ++ + G++S R +S H YFSLK++ ID +I+ Sbjct: 5 LSVKQFNEYFKSNIKHDPIFQNLYINGQLSNVRINNS--HLYFSLKEDRDIIDCVIYYYE 62 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 I+F E G + LV G + SS+ I + + G + K+ ++G Sbjct: 63 DKDIDFSVEIGKDVLVKGTVIFNNYSSRIVISVNEIKEKGLSQKYIEFLQMKEDFRKKGY 122 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIFPVKVQGDECPKEIA 191 F + K IP P+ I +ITS A I D L I+ + + + + PVKVQG+ P + Sbjct: 123 FDLEKKKEIPKFPQKIGLITSNESAAIVDFLSVINQKPNDMHIYLCPVKVQGESSPLMVK 182 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI L+ D+I++ RGGGS EDL FND +++ A + PIISAIGH+ Sbjct: 183 KAIETLDGR-------NLDLIVITRGGGSSEDLSSFNDRLVIEASFLAKTPIISAIGHKI 235 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D TL D ADL TPT A + ++ + N ++ I + I+ L Sbjct: 236 DQTLLDLVADLSLQTPTEAGSYVIKNYSNISKEMKNTIDKMGEITLSRIRDYEYKLLKTR 295 Query: 312 KALPNSDQT--LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 K L + L L ++L+ L+ + + I + +K I I KN Sbjct: 296 KKLERQSPLREIDKKINSLTYLKKDLDIKLKSNLSYNEQRLRLISSELKRFNDIIEIGKN 355 Query: 370 RQHILE 375 HI + Sbjct: 356 NIHIKD 361 Score = 44.0 bits (102), Expect = 0.057, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 12/118 (10%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 R E K + R+ I + L ++ L + + + + Sbjct: 283 RIRDYEYKLLKTRKKLERQSPLREIDKKINSLTYLKKDLDIKLKSNLSYNEQRLRLISSE 342 Query: 449 LQSFAYKNTLKRGYTS------IQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 L+ F + ++ I+D N + K +L I F DG+ V++ Sbjct: 343 LKRFN--DIIE----IGKNNIHIKDNMGNIVFSKHSLKKSDIAFIEFSDGKVKVEVVD 394 >gi|298253447|ref|ZP_06977239.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis 5-1] gi|297532842|gb|EFH71728.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis 5-1] Length = 357 Score = 182 bits (461), Expect = 1e-43, Method: Composition-based stats. Identities = 87/301 (28%), Positives = 141/301 (46%), Gaps = 9/301 (2%) Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + +G +V GK + +++ + + + G+G L +++ +KKL E Sbjct: 4 SNFVQQARELRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQIDELRKKLKGE 63 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKE 189 GLF ++K P+P PK I ++ +P D++ ++ R+P+ R + VQG +CP + Sbjct: 64 GLFDAENKVPLPEFPKCIGLVCAPQARAEGDVITNVNLRWPVTRFKVVHAHVQGVQCPSD 123 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 I AI QL+ P D+II+ARGGGS EDL F+DE +VRA A + PI+SAIGH Sbjct: 124 IIAAIEQLDA------DPEVDVIIVARGGGSFEDLIGFSDEGVVRATAACATPIVSAIGH 177 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E DWTL D AAD+RA TPT AA+ VP + N + I + +I + Sbjct: 178 EDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQTMRMRISARVDNEIRLVEG 237 Query: 310 LLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L L +++ + H L ++ + + + Sbjct: 238 YANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQSTLN 297 Query: 368 K 368 + Sbjct: 298 R 298 Score = 87.9 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 17/182 (9%), Positives = 52/182 (28%), Gaps = 7/182 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ ++ + E+ Q I+ ++ +R + + L Sbjct: 177 HEDDWTLIDLAADMRASTPTDAAKRVVPDVREQWQLIDNALQT-MRMRISARVDNEIRLV 235 Query: 403 -----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + +++ + R+ L + +V L + + ++T Sbjct: 236 EGYANRPSLTRPSTMLEPHERLVEQAVERMRHGLVRLLDDASLTVEKAHASLTALSPQST 295 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 L RGY +Q + + + + G V + + Sbjct: 296 LNRGYAVVQLSGGRVLDDAALAKVGDDMTVTLKSGVVLGKVTGTKSAVTKSAFIKPSKKS 355 Query: 518 KR 519 + Sbjct: 356 SK 357 >gi|258645387|ref|ZP_05732856.1| exodeoxyribonuclease VII, large subunit [Dialister invisus DSM 15470] gi|260402737|gb|EEW96284.1| exodeoxyribonuclease VII, large subunit [Dialister invisus DSM 15470] Length = 369 Score = 182 bits (461), Expect = 2e-43, Method: Composition-based stats. Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 9/347 (2%) Query: 13 PEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 YSV E S + ++ + ++ + G +S H SG +FSL D SRI I K Sbjct: 2 KVYSVRECSSLVAGALQKDYIFKNITISGTVSNL-HFHFSGVIFFSLIDEESRITCRIGK 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEE 130 + + G E L++G I S + ++ ++ S +L L+ KK+L Sbjct: 61 MRSAFLGRRIKNGTEILILGNIKYDKISGRPIFQVDRILSSTESPILEKLDMLKKELKAS 120 Query: 131 GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKE 189 G F + K +P P + ++TS +GAVI DI++ R +R ++ VQG+ + Sbjct: 121 GYFDIEKKKRLPLFPFRVGIVTSASGAVIHDIIRTGFLRNNSVRYSLYSTTVQGENAAAD 180 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A +++ N E PDI+I+ARGGG+ EDL FN +++ A+ S IP+ISA+GH Sbjct: 181 MAEMVIRANEETE-----PPDILIIARGGGAEEDLTPFNQRVLLDAVFCSKIPVISAVGH 235 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD TL D AAD+RA TPT AAE+AVP K++++ +I L L II + L Sbjct: 236 ETDVTLLDLAADVRASTPTQAAEIAVPDKKYIEERIICLYLVLQKIIRDKLNISKLKLQH 295 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 L Q+ + R D L + + ++ + + + Sbjct: 296 TLTIFNILAQSGKVTAVRKDILYNWIILDRKLKKVISNKKLDILERM 342 >gi|55380109|ref|YP_137958.1| exodeoxyribonuclease VII large subunit [Haloarcula marismortui ATCC 43049] gi|55232834|gb|AAV48252.1| probable exodeoxyribonuclease VII large subunit [Haloarcula marismortui ATCC 43049] Length = 403 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 90/359 (25%), Positives = 147/359 (40%), Gaps = 19/359 (5%) Query: 17 VSELSYHLKHIVE--SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 V L+ + +VE L+ V G++S Y G+ S+ H + L S I +++ + Sbjct: 27 VDTLNEDIGAVVESADQLAFDYVVGDVSDY-GVSSNDHVHLDLVHEGSTIHCVLFGYKRS 85 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 I+ E+G++ V G ++ + +I+E ++ G GT E+ ++ L +GL Sbjct: 86 AIDATIEDGMQVAVKGSLSYYEDGGNVSVIVEDIVEVGEGTYQRIYEQNRQLLDSDGLLD 145 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 +HK +P P+ I + TS T D + I R+P + ++I VQGD+ I A Sbjct: 146 PEHKQALPDFPERIGIATSATSDARMDAITSIHERYPDVDIVIQNTSVQGDDAMMSIMGA 205 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I E PR D+I+L RGGGS + L FN+ + R I + P++ +GHE D Sbjct: 206 IS------ELDDDPRVDVIVLTRGGGSDKHLRVFNETPLCRVIHKTETPVVVGVGHENDR 259 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TLAD AD R TPT A + E + L +A Sbjct: 260 TLADEVADRRVMTPTEAGNIVPERTTLEAELETLEERLNTAYTETAETTLETMDDRLTRA 319 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 R L + NR++ ++ Q+ R+ Sbjct: 320 YR---------RTVESDLSAFEAELDRTYDTHVRDELTDLANRLEQARTQYDQQREREQ 369 >gi|325067257|ref|ZP_08125930.1| exodeoxyribonuclease VII large subunit [Actinomyces oris K20] Length = 232 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 71/232 (30%), Positives = 113/232 (48%), Gaps = 13/232 (5%) Query: 31 NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHS--RIDAIIWKGTL----NKIEFLPEEGI 84 +S V V G++ +G A+ +L+D + + I+ L + EG Sbjct: 7 RMSQVWVEGQVIQLNRRPGAGMAFLTLRDTDADISMSVSIYARVLDAVLARTGAELGEGA 66 Query: 85 EFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144 +V K T + Q+ + + P G G LL +E+ ++ L EGLF + K P+PF+ Sbjct: 67 RVVVRAKPTFWAKRGSLQLQADDIRPVGVGDLLARIEQLRRILAAEGLFDAERKRPLPFL 126 Query: 145 PKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEG 203 P+ + ++ D+L R+P L + V VQG E+ A+ E Sbjct: 127 PRKVGLVCGRQAKAKDDVLVNARLRWPGLPFEVREVAVQGARAVGEVTRAVQ------EL 180 Query: 204 RTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255 + D+I++ARGGG++EDL F+DE +VRA A P++SAIGHETD L Sbjct: 181 DADAQIDVIVVARGGGAVEDLLPFSDEGLVRAAAACRTPLVSAIGHETDCPL 232 >gi|167752371|ref|ZP_02424498.1| hypothetical protein ALIPUT_00615 [Alistipes putredinis DSM 17216] gi|167660612|gb|EDS04742.1| hypothetical protein ALIPUT_00615 [Alistipes putredinis DSM 17216] Length = 408 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 81/369 (21%), Positives = 148/369 (40%), Gaps = 26/369 (7%) Query: 15 YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDA 66 ++S+L +K ++ + V V EI+ + + SGH Y L + S+ A Sbjct: 5 LTLSQLQKLVKATLDEAFALPVWVSAEIAEIKINY-SGHCYLELVEKGGDNGVPLSQARA 63 Query: 67 IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 +IW+ +I GI L I+ + + + I + P+ G + Sbjct: 64 VIWRTAYARIAGYFEAETGQRLAAGIRILARVMIS-YHELYGFSLNILDIDPTFTLGDME 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVII 176 + ++L EG++ +NP+P + + IA+++S A +D + + + + + Sbjct: 123 RQRQITIERLQREGVWDINRENPLPQVVQRIAIVSSRQAAGYQDFCKELGKSPYAFSLTL 182 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 F +QG I A+ + + D ++L RGGGS DL FN + I Sbjct: 183 FDAFMQGAGAEDSIVAALDAVADRMDD-----FDAVVLIRGGGSASDLNCFNAYRLCAHI 237 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A +PI++ IGH+ D ++AD A TPT A V ++ L +L + Sbjct: 238 AQFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTGVEGWLDTAALQLRDAS 297 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + L L + + L R +L R EL + ++ R++ Sbjct: 298 AGIFRRHELRLAELGSEIAHQSALLLLRRNEQLSRWSDELSTAVGELLRRQHTRLTTAEE 357 Query: 356 RIKSDFLIH 364 I S H Sbjct: 358 LIASRSPEH 366 Score = 80.2 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 61/184 (33%), Gaps = 4/184 (2%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N+ + + + + H+ + + H + +L+ + + Sbjct: 229 NAYRLCAHIAQFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTGVEGWLDT 288 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + R L E + + Q+ + + + + + + + Sbjct: 289 AALQLRDASAGIFRRHELRLAELGSEIA---HQSALLLLRRNEQLSRWSDELSTAVGELL 345 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 + HT ++ ++ S + ++ L G+ + + +T + L++ + + DG + Sbjct: 346 RRQHTRLTTAEELIASRSPEHILSLGFAIVHRGD-ETVTSAKGLSSGDTLRVELSDGTFD 404 Query: 496 AIVI 499 A V Sbjct: 405 ATVK 408 >gi|302345557|ref|YP_003813910.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica ATCC 25845] gi|302150183|gb|ADK96445.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica ATCC 25845] Length = 434 Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats. Identities = 81/393 (20%), Positives = 162/393 (41%), Gaps = 30/393 (7%) Query: 12 HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SR 63 S+ EL+ + ++++ LS V E+S + GH Y L + + +R Sbjct: 2 TKALSLFELNSLVADVIDATLSRSYWVEAELSE--ARENRGHCYMELIEKNEGSNVPIAR 59 Query: 64 IDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSG 114 A W I+ G++ ++ F + I++ + P G Sbjct: 60 ASAKCWSNIWTLIKPAFIRITGQEIRAGMKVMLQVHAQ-FHPQYGFSWIVDDINPEYTMG 118 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP--- 171 ++ ++ ++L EG+F Q + +P + IAVI+S T A D ++ Sbjct: 119 DMMRKRQEIIRQLKAEGVFDLQKELCLPMFAQRIAVISSETAAGYGDFCNQLETNDYGLY 178 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 V +FP +QGD + I NA+ Q+N+ +E D +++ RGGG+ DL F+ Sbjct: 179 FHVELFPAIMQGDSVEQSIINALNQINSREED-----FDCVVIIRGGGATADLSGFDTLN 233 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + +AN +PII+ IGHE D ++ D + R TPT AA + + N +A Sbjct: 234 LAENVANFPLPIITGIGHERDESILDMVSFQRMKTPTAAAAYLIDHIASTLMRVENAQAA 293 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR-LPRELEHNLEIIIFRKYRHF 350 + + + + ++ + + + +P + + L + L + I + + Sbjct: 294 IIDGVKKALEVEKMRIQHIGSHIPVLFSVVRTKQDAWLEGLSQRLVMRMNEAIKQAEFYL 353 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 + + N + L + + + + +Q + Sbjct: 354 STLQNCMLL-TLQNKLSVEQHRLDILEQRARLL 385 Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 7/174 (4%) Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKS--DFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 L ++ +HI + + + I ++ + ++ I+ I Sbjct: 258 LDMVSFQRMKTPTAAAAYLIDHIASTLMRVENAQAAIIDGVKKALEVEKMRIQHIGSHIP 317 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL----SHKIKSCHTSVSI 444 + + ++ A L L ++ R+ + ++ ++ + +K+ + I Sbjct: 318 VLFSVVRTKQDAWLEGLSQRLVMRMNEAIKQAEFYLSTLQNCMLLTLQNKLSVEQHRLDI 377 Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 + + LKRGY+ N I ++L I F G+ + V Sbjct: 378 LEQRARLLDPSLLLKRGYSITL-CNGRTIRNAKDLKIGDTITTRFETGEVESKV 430 >gi|289706734|ref|ZP_06503078.1| exodeoxyribonuclease VII, large subunit [Micrococcus luteus SK58] gi|289556534|gb|EFD49881.1| exodeoxyribonuclease VII, large subunit [Micrococcus luteus SK58] Length = 437 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 96/382 (25%), Positives = 172/382 (45%), Gaps = 15/382 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--N 60 P + + + LS +LK +E + G++ ++ G+ Y +++D Sbjct: 20 PARAGETSAERPWPLRRLSENLKAHIERA-PATWIEGQLIEFKNNR--GNVYMTMRDLEE 76 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + W+ ++ ++G + K + + + + ++ + P G G LL + Sbjct: 77 EVSLPLTAWRNVAMTLDGTVQQGSRVVARVKPNFWLKAGRLSMNVQEMRPVGLGDLLARV 136 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E ++ L EEGL S HK P+P +P I +IT +D+L+ R+P I V Sbjct: 137 ELLRRALAEEGLTSPAHKRPLPLLPHRIGLITGRDSDAKKDVLRNTLLRWPAAEFEIREV 196 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW-HFNDEMIVRAIAN 238 VQG E P+++A A+ + P D+I++ARGGG++E++ F+DE +VRA+A Sbjct: 197 AVQGAEAPRQVAAALAE------LDADPAVDVIVIARGGGALEEVVLPFSDEALVRAVAA 250 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P++SAIGHE D + D ADLRA TPT AA+ VP + L + RL + R Sbjct: 251 ARTPVVSAIGHEADRPVLDDVADLRASTPTDAAKRIVPDAAQEAAGLADARLRLAAAVER 310 Query: 299 LIKYKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ + L +L L + + DR L + R+ + R Sbjct: 311 RVRAEAEGLAALRSRPVLARPHVMVDTRQEETDRWRERGRSALGHRLVREEDAVTQLRAR 370 Query: 357 IKSDFLIHNIQKNRQHILEKQQ 378 +++ + + + Q Sbjct: 371 VRALSPQRTLDRGYAVVQHAGQ 392 Score = 90.2 bits (222), Expect = 7e-16, Method: Composition-based stats. Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 1/118 (0%) Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + + + R L H++ +V+ +++ + + TL Sbjct: 321 ALRSRPVLARPHVMVDTRQEETDRWRERGRSALGHRLVREEDAVTQLRARVRALSPQRTL 380 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHN 516 RGY +Q + +AT R+ I G+ A V+ P + Sbjct: 381 DRGYAVVQHA-GQVVRDADQVATDDRLDILVAAGRIAADVVATHRTTPTPPHERTRQA 437 >gi|311747947|ref|ZP_07721732.1| exodeoxyribonuclease VII, large subunit [Algoriphagus sp. PR1] gi|126574920|gb|EAZ79278.1| exodeoxyribonuclease VII, large subunit [Algoriphagus sp. PR1] Length = 436 Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats. Identities = 95/506 (18%), Positives = 183/506 (36%), Gaps = 96/506 (18%) Query: 16 SVSELSYHLKHIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNH-----SRIDAIIW 69 S+SEL+ ++ +++S L V V GE+S +R GHAYF L + + ++I A +W Sbjct: 6 SISELNQLIQQVLDSELDPVYWVIGELSDFRLSPQ-GHAYFELVEKNGNKIQAKIRANLW 64 Query: 70 KGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTAL 120 + T + + G++ L I F + ++ + PS G Sbjct: 65 QFTYRNVATRFESSTGTSLKNGMKVLAQVAIN-FHPLYGLSVNVKDIDPSFSLGERARVR 123 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIF 177 ++ +L EG+ + PIP + + I +I+S T A D + +I + + +F Sbjct: 124 QETIDRLTREGMLQLNSQLPIPGVIQKIGIISSATAAGYGDFINQIESNSGGYKIYHKLF 183 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P +QG++ K + AI + + I++ RGGG+ DL F++ + IA Sbjct: 184 PSLMQGNDAVKNLIQAIDSAEK---SKDLLGLESIVIIRGGGAQLDLDCFDEYELAVKIA 240 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S+P+ + IGHE D T+AD A + TPT AE + Sbjct: 241 KCSLPVFTGIGHERDDTIADMVAHTKLKTPTAVAEFLLSG-------------------- 280 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 RL R +E ++ I + R+ Sbjct: 281 -----------------------FREFEERLTLASRRMERATKLKIHEQSTIIQQFSQRL 317 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 +S IQ++ + + +I + L++ + + +R+ T + Sbjct: 318 QSYSRNRLIQEH----DKLNSWLLRINTSSKNMLELQQLKLENLEKGIRQNTTRILTKET 373 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 ++ ++ K+ L +GYT + + I Sbjct: 374 EKLENKSHWLKQ----------------------LDPKSILAKGYTRTEIS-GTPIH-LT 409 Query: 478 NLATKTRILIN-FFDGQANAIVINKA 502 + + + + N+ + Sbjct: 410 KAKVGDEMTTHTLAE-KINSTITQIE 434 >gi|288803517|ref|ZP_06408948.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica D18] gi|288333940|gb|EFC72384.1| exodeoxyribonuclease VII, large subunit [Prevotella melaninogenica D18] Length = 434 Score = 181 bits (458), Expect = 3e-43, Method: Composition-based stats. Identities = 81/393 (20%), Positives = 160/393 (40%), Gaps = 30/393 (7%) Query: 12 HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SR 63 S+ EL+ + ++++ LS V E+S + GH Y L + + +R Sbjct: 2 TKALSLFELNSLVADVIDATLSRSYWVEAELSE--ARENRGHCYMELIEKNEGSNVPIAR 59 Query: 64 IDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSG 114 A W I+ G++ ++ F + I++ + P G Sbjct: 60 ASAKCWSNIWTLIKPAFVRITGQEIRAGMKVMLQVHAQ-FHPQYGFSWIVDDINPEYTMG 118 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171 ++ ++ ++L EG+F Q + +P + IAVI+S T A D ++ Sbjct: 119 DMMRKRQEIIRQLKAEGVFDLQKELCLPMFAQRIAVISSETAAGYGDFCNQLETNEYGLY 178 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 V +FP +QGD + I NA+ Q+N+ +E D +++ RGGG+ DL F+ Sbjct: 179 FHVELFPAIMQGDSVEQSIINALNQINSREED-----FDCVVIIRGGGATADLSGFDTLN 233 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + +AN +PII+ IGHE D ++ D + R TPT A + + N + Sbjct: 234 LAENVANFPLPIITGIGHERDESILDMVSFQRVKTPTAVAAYLIDYLASTLMRVENAQVA 293 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR-LPRELEHNLEIIIFRKYRHF 350 + + + + ++ + + + +P + + L + L + I + H Sbjct: 294 IVDGVKKALEVEKMRIQHIGSHIPVLFSVVRTKQEAWLEGLSQRLVMRMNETIKQADFHV 353 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 + + NR+ L + + + +Q + Sbjct: 354 STLQNRLLP-TLQNKLSSEHHRLDILEQRARLL 385 Score = 88.3 bits (217), Expect = 3e-15, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 4/134 (2%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ + I HI + + L M +T I H+ L Sbjct: 301 ALEVEKMRIQHIGSHIPVLFSVVRTKQEAWLEGLSQRLVMRMNET---IKQADFHVSTLQ 357 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ L +K+ S H + I + + LKRGY+ N I ++L Sbjct: 358 NRLLPTLQNKLSSEHHRLDILEQRARLLDPSLLLKRGYSITL-CNGKTIRNAKDLKIGDT 416 Query: 485 ILINFFDGQANAIV 498 I F G+ + V Sbjct: 417 ITTRFEAGEVESKV 430 >gi|189463746|ref|ZP_03012531.1| hypothetical protein BACINT_00079 [Bacteroides intestinalis DSM 17393] gi|189438696|gb|EDV07681.1| hypothetical protein BACINT_00079 [Bacteroides intestinalis DSM 17393] Length = 414 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 86/375 (22%), Positives = 165/375 (44%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 S+ +L+ ++ +E L V+ E+S R S+GH Y KD ++ Sbjct: 7 LSLYDLNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFIQKDPRSNNLIAKARG 65 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 66 TIWANVYRLLKPYFEESTGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 124 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + K+L EEG+ + + +P +P+ IAV++SPT A D ++ F Sbjct: 125 RRRREILKQLEEEGVLTLNKELEMPVLPQRIAVVSSPTAAGYGDFCHQLKNNSRGFFFHT 184 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD + + +A+ + +E D +++ RGGG+ DL F+ ++ Sbjct: 185 ELFPALMQGDRVEESVLSALDAILNRQED-----FDAVVIIRGGGATSDLSGFDTYLLAA 239 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AAE + + L L ++L+ Sbjct: 240 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAEYLINCMDLAADELEVLISQLHE 299 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + + + L S +P++ + +S ++ L +++ ++ ++ R+ + Sbjct: 300 SVRSRLTEEHRKLISYRNRIPSAVVRRVSDAKLALLTTRKDISLAVQTLLSRQRHRLELL 359 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 360 QQRLADASPEKMLAR 374 Score = 86.7 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 43/127 (33%), Gaps = 1/127 (0%) Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E + I Q+ + + E ++ I+ + + R+ + I + Sbjct: 288 DELEVLISQLHESVRSRLTEEHRKLISYRNRIPSAVVRRVSDAKLALLTTRKDISLAVQT 347 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + + + + L + + L RGY+ + + L I+ + G+ Sbjct: 348 LLSRQRHRLELLQQRLADASPEKMLARGYSITL-KDGKVVKNGDVLQLNDEIVTRLYQGE 406 Query: 494 ANAIVIN 500 +IV + Sbjct: 407 IVSIVTD 413 >gi|224025626|ref|ZP_03643992.1| hypothetical protein BACCOPRO_02366 [Bacteroides coprophilus DSM 18228] gi|224018862|gb|EEF76860.1| hypothetical protein BACCOPRO_02366 [Bacteroides coprophilus DSM 18228] Length = 436 Score = 180 bits (456), Expect = 5e-43, Method: Composition-based stats. Identities = 88/435 (20%), Positives = 170/435 (39%), Gaps = 28/435 (6%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ + + L V+ E+S R + SGH Y F KD ++ Sbjct: 6 LSLVELNGLVRQSIRTCLPDEYWVQAELSDVRANY-SGHCYLEFVQKDPKSNALLAKARG 64 Query: 67 IIWKGTLNKIE--FLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IIW ++ F E G + LV + Y + + + P+ G + Sbjct: 65 IIWSNVYMRLRPYFERETGQAFVSGIKVLVKVTVDFHELYG-YSLTVVDIDPTYTLGDMA 123 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + K+L EG+ + + P++ + IAVI+S T A D ++ F V Sbjct: 124 RRRREILKRLEGEGVLTLNKELDFPYLTQRIAVISSATAAGYGDFCNQLFHNAWGFVFYV 183 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD+ + I A+ Q+ D +++ RGGG+ DL F+ + Sbjct: 184 RLFPAIMQGDKVEETIIRALEQIYQ-----EIDHWDAVVIIRGGGATSDLSGFDTYELAA 238 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A +P+I+ IGHE D T+ D + R TPT AAE + + L + ++ Sbjct: 239 HCAQFPLPVITGIGHERDDTVLDMVSHTRVKTPTAAAEFLISRMREVAEELESYREQIRQ 298 Query: 295 IIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L+ + +P L ++R + L R ++ + + + Sbjct: 299 GVPERLEREKERLDRWVTRIPGKVLMRLQAEQFRQENLARRMQMAWQTRLVHEQYRLQLS 358 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 ++ +++R +LE+Q + + K A+ Q + + Sbjct: 359 QRLTQAVTARLQKEEHRLELLEQQVKAASPEVLLKKGYSITLKNGKAVTDASELQPGDEV 418 Query: 414 FYLHTHIKKLITRIE 428 ++ Sbjct: 419 QTRLAKGTVNSRILK 433 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 18/164 (10%), Positives = 57/164 (34%), Gaps = 6/164 (3%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L + +I+ +++ ++ + I V L+ ++ Sbjct: 278 LISRMREVAEELESYREQIRQGVP-ERLEREKERLDRWVTRIPGKVLMRLQAEQFRQENL 336 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + M + R+ + ++ L R+ ++ +++ + + + +++ + + L Sbjct: 337 ARRMQMAWQ---TRLVHEQYRLQ-LSQRLTQAVTARLQKEEHRLELLEQQVKAASPEVLL 392 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 K+GY+ N +T L + G N+ ++ Sbjct: 393 KKGYSITL-KNGKAVTDASELQPGDEVQTRLAKGTVNSRILKIE 435 >gi|167718408|ref|ZP_02401644.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei DM98] Length = 170 Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats. Identities = 46/151 (30%), Positives = 80/151 (52%), Gaps = 1/151 (0%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNK 75 VS L+ + ++E + V GE+S + +SGH YFS+KD +++ ++++G Sbjct: 21 PVSALNRAIGTMLERTFPLLWVAGEVSNFT-RAASGHWYFSIKDQQAQMRCVMFRGRAQH 79 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 EF P EG V +T + + Q+ +E++ +G G L A + K +L EGLF+ Sbjct: 80 AEFTPREGDRIEVRALVTMYEPRGEVQLSVEAIRRTGQGRLYEAFLRLKAQLEAEGLFAP 139 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166 + K P P+ I ++TS A +RD+L + Sbjct: 140 ERKRAPPTHPRAIGIVTSLQAAALRDVLTTL 170 >gi|46201318|ref|ZP_00208058.1| COG1570: Exonuclease VII, large subunit [Magnetospirillum magnetotacticum MS-1] Length = 280 Score = 180 bits (456), Expect = 6e-43, Method: Composition-based stats. Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 25/304 (8%) Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284 FN+E++VRA A S+IP+ISA+GHETD TL D+A+DLRAPTPT AAE AVPV+ L ++ Sbjct: 1 MAFNEEIVVRAAAQSAIPLISAVGHETDTTLIDFASDLRAPTPTAAAEKAVPVRAELVAT 60 Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 + + +R+ + R ++ + N L +ALP+ + + RLD L + +++ Sbjct: 61 VAEMGSRMIGAMQRGLEERRNRLGHTFRALPHPRRVMEDCARRLDERAERLHNAPRLLLE 120 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 R+ + + R++ + + + ++ +K + + Sbjct: 121 RRRAELDRLAARLR--HPREQLAEAGHRLAALSTRLDHAMKTVTAAERAANERRSL---- 174 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 +++ R+ L + V+ ++L+SF+Y+ L+RG+ Sbjct: 175 --------------QLEQSAARLIQALPRLLDEKAKRVAHAGQLLESFSYRKVLERGFAV 220 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524 ++D + +T T + + F DG+ V + P + H G Sbjct: 221 VRDEHGVPVTSVEAAKPGTALAVEFADGKVGVRVEGSSVP-----PAPKPHRKPTTPDGR 275 Query: 525 QGEL 528 QG L Sbjct: 276 QGSL 279 >gi|317475695|ref|ZP_07934955.1| exonuclease VII [Bacteroides eggerthii 1_2_48FAA] gi|316908151|gb|EFV29845.1| exonuclease VII [Bacteroides eggerthii 1_2_48FAA] Length = 413 Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ +L+ ++ +E L ++ E+S R S+GH Y F KD ++ Sbjct: 4 LSLYDLNVLVRRSLEQCLPDTYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 63 TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174 ++ K+L EEG+ + IP +P+ +AVI+S T A D ++ Sbjct: 122 RRRKEILKQLEEEGVLLLNKELDIPRLPQRVAVISSSTAAGYGDFCHQLKNNPGGFYFYT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD + + A+ ++N+ E D++++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGDRVEESVLAALDKINSRLES-----FDVVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE + L L RL Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIGCMNDAAEELEMLAGRLYG 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 I L+ + L S +P++ + +S +++ L + +++ + R + + Sbjct: 297 GIRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATSSLSRHHHRLELL 356 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 357 QQRLTDVSPEKQLAR 371 Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 1/130 (0%) Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E + ++ + E ++ ++ + + I + + I + Sbjct: 285 EELEMLAGRLYGGIRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATS 344 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + H + + + L + + L RGY+ N + +L I + G+ Sbjct: 345 SLSRHHHRLELLQQRLTDVSPEKQLARGYSITL-KNGRIVKNVSSLNEGDEITTRLYQGE 403 Query: 494 ANAIVINKAP 503 + V NK Sbjct: 404 LISTVTNKNT 413 >gi|256545254|ref|ZP_05472619.1| exodeoxyribonuclease 7 large subunit (exodeoxyribonuclease VII large subunit) [Anaerococcus vaginalis ATCC 51170] gi|256399081|gb|EEU12693.1| exodeoxyribonuclease 7 large subunit (exodeoxyribonuclease VII large subunit) [Anaerococcus vaginalis ATCC 51170] Length = 393 Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats. Identities = 102/350 (29%), Positives = 168/350 (48%), Gaps = 15/350 (4%) Query: 15 YSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT 72 SV + + ++K + + +V V+GEI+ Y+ H+ H YFSLK+ + ID +++ Sbjct: 4 LSVKQFNQYIKTSFKHDPLFQNVSVKGEIANYKISHN--HIYFSLKEENEIIDCVVYYYE 61 Query: 73 LNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 I + G E +V G + SK I + ++ G K K++ ++G Sbjct: 62 QKDIG-DYDNGDEVIVDGNLIYNSFFSKISISVNNIEKKGLSEEYLKFLKIKEEFFKKGY 120 Query: 133 FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIA 191 F K I PK I +ITS A I D L I+ + + ++PVKVQG EI Sbjct: 121 FDKDTKKTICDYPKEIGLITSDKSAAIVDFLSVINKEISDINIYLYPVKVQGLSAKDEII 180 Query: 192 NAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET 251 AI L+ D I++ RGGGS EDL FN++ IV I + PIISAIGH+ Sbjct: 181 KAINVLDK-------KNLDTIVITRGGGSKEDLKVFNEKDIVEEIYKAKSPIISAIGHKI 233 Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +L D +DL TPT A V + ++ + + + + R I+ K LN+L Sbjct: 234 DLSLTDLVSDLSLQTPTEAGSYLVRNYKKIRQDINKIFVDIQKTLNRNIELKELKLNNLK 293 Query: 312 KALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 +L + D+ L ++ + ++++NL + I +K + + ++ S Sbjct: 294 YSLDSYSLDKLLDEKTKNINEIFEKIKNNLNLNIEKKEKDLEILKYKLNS 343 Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 17/181 (9%) Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + + + + I + +++ + ++ + +Q I +I Sbjct: 216 EEIYKAKSPIISAIGHKIDLSLTDLVSDLSLQTPTEAGSYLVRNYKKIRQDINKIFVDIQ 275 Query: 389 RYIFLEKKEKIAILHMLREQTK-----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + + + K L+ L+ + +I ++ +I+ L+ I+ + Sbjct: 276 KTLNRNIELKELKLNNLKYSLDSYSLDKLLDEKTKNINEIFEKIKNNLNLNIEKKEKDLE 335 Query: 444 ITTRILQSFAYKNTLKRGYTS------IQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 I L S K+ L I+D + NFI K +L K ++ I F DG+ A Sbjct: 336 ILKYKLNSL--KSILD----IKKNSIFIKDFDGNFIYSKYSLKNKDKVNIVFSDGEVKAE 389 Query: 498 V 498 + Sbjct: 390 I 390 >gi|327313906|ref|YP_004329343.1| exodeoxyribonuclease VII large subunit [Prevotella denticola F0289] gi|326945601|gb|AEA21486.1| exodeoxyribonuclease VII, large subunit [Prevotella denticola F0289] Length = 454 Score = 179 bits (455), Expect = 8e-43, Method: Composition-based stats. Identities = 86/391 (21%), Positives = 163/391 (41%), Gaps = 30/391 (7%) Query: 12 HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63 ++ EL+ + +++ L+ V E+S R GH Y L KD + +R Sbjct: 22 EKALTLYELNCMVADTIDATLARSYWVEAELSEVRENR--GHCYMELIEKDGNGNVPVAR 79 Query: 64 IDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114 A W+ + I G++ ++ F + I++ + P G Sbjct: 80 ASAKCWRNVWSVIMPYFVRITGQQVHSGMKLMLQVHAQ-FHPQYGFSWIVDDINPEFTMG 138 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171 ++ ++ ++L EEG+F Q + +P IAVI+S T A D ++ F Sbjct: 139 DMMRKRQEIVRRLKEEGVFDLQKELRLPMFASRIAVISSETAAGYGDFCNQLETNEYGFK 198 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 + +F +QG + I +A+ ++N +E D +++ RGGG+ DL F+ Sbjct: 199 FHIELFQTVMQGGQVEPGIISALDRINGREEE-----FDAVVIIRGGGATADLSGFDTLE 253 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + +AN +P+I+ IGHE D ++ D A LR TPT AA + + + N + Sbjct: 254 LAENVANFPLPVITGIGHERDESVLDMVAFLRVKTPTAAASFLIDQLAATLARVENAQRT 313 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHF 350 L + R ++ + L +P + + RLD L L + + R H Sbjct: 314 LAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFHRLAERMGESLHRSAFHL 373 Query: 351 NHI-INRIKSDFLIHNIQKNRQHILEKQQHI 380 + + + L + +R +L+++ + Sbjct: 374 DALMQQALPPLHLRLSEASHRLEMLDQRVRL 404 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 7/157 (4%) Query: 350 FNHIINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 + + + R+ + ++ + L + ++ A L L Sbjct: 297 IDQLAATLARVENAQRTLAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFH 356 Query: 408 QTKNR----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + R + H+ L+ + L ++ + + + ++ LKRGY+ Sbjct: 357 RLAERMGESLHRSAFHLDALMQQALPPLHLRLSEASHRLEMLDQRVRLLDPSLLLKRGYS 416 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 N + L I F +G+ + V + Sbjct: 417 ITLH-NGRAVRSAGELKVGDVITTRFAEGEIESKVDS 452 >gi|218128480|ref|ZP_03457284.1| hypothetical protein BACEGG_00050 [Bacteroides eggerthii DSM 20697] gi|217989371|gb|EEC55684.1| hypothetical protein BACEGG_00050 [Bacteroides eggerthii DSM 20697] Length = 416 Score = 179 bits (454), Expect = 9e-43, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ +L+ ++ +E L ++ E+S R S+GH Y F KD ++ Sbjct: 7 LSLYDLNVLVRRSLEQCLPDTYWIQAELSDVRTN-STGHCYLEFVQKDARSNSLIAKARG 65 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 66 TIWSNVFRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 124 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRV 174 ++ K+L EEG+ + IP +P+ +AVI+S T A D ++ Sbjct: 125 RRRKEILKQLEEEGVLLLNKELDIPRLPQRVAVISSSTAAGYGDFCHQLKNNPGGFYFYT 184 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD + + A+ ++N+ E D++++ RGGG+ DL F+ ++ Sbjct: 185 ELFPALMQGDRVEESVLVALDKINSRLES-----FDVVVIIRGGGATSDLSGFDTYLLAA 239 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE + L L RL Sbjct: 240 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAEFLIGCMNDAAEELEMLAGRLYG 299 Query: 295 IIIRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + L+ + L S +P++ + +S +++ L + +++ + R + + Sbjct: 300 GVRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATSSLSRHHHRLELL 359 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 360 QQRLTDVSPEKQLAR 374 Score = 91.0 bits (224), Expect = 4e-16, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 1/130 (0%) Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E + ++ + E ++ ++ + + I + + I + Sbjct: 288 EELEMLAGRLYGGVRELLAQEHRKLVSYRNRIPSAAYRYISDAKFALLTVSKDIVQAATS 347 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + H + + + L + + L RGY+ N + +L I + G+ Sbjct: 348 SLSRHHHRLELLQQRLTDVSPEKQLARGYSITL-KNGRIVKNVSSLNEGDEITTRLYQGE 406 Query: 494 ANAIVINKAP 503 + V NK Sbjct: 407 LISTVTNKNT 416 >gi|325859991|ref|ZP_08173118.1| exodeoxyribonuclease VII, large subunit [Prevotella denticola CRIS 18C-A] gi|325482517|gb|EGC85523.1| exodeoxyribonuclease VII, large subunit [Prevotella denticola CRIS 18C-A] Length = 434 Score = 179 bits (454), Expect = 9e-43, Method: Composition-based stats. Identities = 86/391 (21%), Positives = 163/391 (41%), Gaps = 30/391 (7%) Query: 12 HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63 ++ EL+ + +++ L+ V E+S R GH Y L KD + +R Sbjct: 2 EKALTLYELNCMVAETIDATLARSYWVEAELSEVRENR--GHCYMELIEKDGNGNVPVAR 59 Query: 64 IDAIIWKGTLNKI--------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114 A W+ + I G++ ++ F + I++ + P G Sbjct: 60 ASAKCWRNVWSVIMPYFVRITGQQVHSGMKLMLQVHAQ-FHPQYGFSWIVDDINPEFTMG 118 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171 ++ ++ ++L EEG+F Q + +P IAVI+S T A D ++ F Sbjct: 119 DMMRKRQEIVRRLKEEGVFDLQKELRLPMFASRIAVISSETAAGYGDFCNQLETNEYGFK 178 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 + +F +QG + I +A+ ++N +E D +++ RGGG+ DL F+ Sbjct: 179 FHIELFQTVMQGGQVEPGIISALDRINGREEE-----FDAVVIIRGGGATADLSGFDTLE 233 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + +AN +P+I+ IGHE D ++ D A LR TPT AA + + + N + Sbjct: 234 LAENVANFPLPVITGIGHERDESVLDMVAFLRVKTPTAAASFLIDQLAATLARVENAQRT 293 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHF 350 L + R ++ + L +P + + RLD L L + + R H Sbjct: 294 LAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFHRLAERMGESLHRSAFHL 353 Query: 351 NHI-INRIKSDFLIHNIQKNRQHILEKQQHI 380 + + + L + +R +L+++ + Sbjct: 354 DALMQQALPPLHLRLSEASHRLEMLDQRVRL 384 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 49/157 (31%), Gaps = 7/157 (4%) Query: 350 FNHIINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 + + + R+ + ++ + L + ++ A L L Sbjct: 277 IDQLAATLARVENAQRTLAEGVRRKLETEKMRLRHFGSHIPVLFSLVRTKQEARLDALFH 336 Query: 408 QTKNR----IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + R + H+ L+ + L ++ + + + ++ LKRGY+ Sbjct: 337 RLAERMGESLHRSAFHLDALMQQALPPLHLRLSEASHRLEMLDQRVRLLDPSLLLKRGYS 396 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 N + L I F +G+ + V + Sbjct: 397 ITLH-NGRAVRSAGELKVGDVITTRFAEGEIESKVDS 432 >gi|299148189|ref|ZP_07041251.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_23] gi|298512950|gb|EFI36837.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 3_1_23] Length = 429 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 91/375 (24%), Positives = 164/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R ++GH Y F KD ++ Sbjct: 23 LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 81 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW ++ EE GI+ LV + Y + + + P+ G + Sbjct: 82 MIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 140 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L EEG+ + + IP +P+ IAVI+S T A D ++ RF Sbjct: 141 RRRREILLQLEEEGVLTLNKELEIPILPQRIAVISSATAAGYGDFCHQLQHNSGRFFFYT 200 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ ++N D++++ RGGG+ DL F+ ++ Sbjct: 201 ELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 255 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AAE+ + + L L R+ Sbjct: 256 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVAEVAEHLEELSMRIQQ 315 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L+ + L +L +PN + L+ +R+ L ++L + ++ R+ + Sbjct: 316 GAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDLSQVTKALVARQSHRLELL 375 Query: 354 INRIKSDFLIHNIQK 368 RI + + Sbjct: 376 QQRIADASPDKLLSR 390 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E I+Q + LE++ + + ++ + Sbjct: 294 LLIHQVAEVAEHLEELSMRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 350 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 351 LAAKKDLSQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 409 Query: 481 TKTRILINFFDGQANAIV 498 ++ G+ ++V Sbjct: 410 PGDHLITRLSKGEVRSVV 427 >gi|237719108|ref|ZP_04549589.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 2_2_4] gi|229451487|gb|EEO57278.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 2_2_4] Length = 414 Score = 179 bits (454), Expect = 1e-42, Method: Composition-based stats. Identities = 91/375 (24%), Positives = 164/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R ++GH Y F KD ++ Sbjct: 8 LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 66 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW ++ EE GI+ LV + Y + + + P+ G + Sbjct: 67 MIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 125 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L EEG+ + + IP +P+ IAVI+S T A D ++ RF Sbjct: 126 RRRREILLQLEEEGVLTLNKELEIPILPQRIAVISSATAAGYGDFCHQLQHNSGRFFFYT 185 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ ++N D++++ RGGG+ DL F+ ++ Sbjct: 186 ELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 240 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AAE+ + + L L R+ Sbjct: 241 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVAEVAEHLEELSMRIQQ 300 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L+ + L +L +PN + L+ +R+ L ++L + ++ R+ + Sbjct: 301 GAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDLSQVTKALVARQSHRLELL 360 Query: 354 INRIKSDFLIHNIQK 368 RI + + Sbjct: 361 QQRIADASPDKLLSR 375 Score = 90.2 bits (222), Expect = 9e-16, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E I+Q + LE++ + + ++ + Sbjct: 279 LLIHQVAEVAEHLEELSMRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 335 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 336 LAAKKDLSQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 394 Query: 481 TKTRILINFFDGQANAIV 498 ++ G+ ++V Sbjct: 395 PGEHLITRLSKGEVRSVV 412 >gi|330998317|ref|ZP_08322142.1| exodeoxyribonuclease VII, large subunit [Paraprevotella xylaniphila YIT 11841] gi|329568706|gb|EGG50507.1| exodeoxyribonuclease VII, large subunit [Paraprevotella xylaniphila YIT 11841] Length = 431 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 81/390 (20%), Positives = 161/390 (41%), Gaps = 29/390 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL-------KDNHSRIDA 66 ++ EL+ ++ +E L ++ E+S R + +GH Y +D ++ Sbjct: 4 LTLYELNGLVRGTLERTLQAEYWLQAELSEVREAY-NGHCYLEFVQKSVNGRDLVAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 ++W GT ++ + E G++ LV +T Y + + + P+ G + Sbjct: 63 VVWAGTYRLLKPMFERETGRALSPGLKVLVKVGVTFHELYG-YSLTVADIDPAYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L +G+ +D + P+P IAVI+S T A D ++ R V Sbjct: 122 RLRREILARLEADGILNDNKELPLPMSANRIAVISSATAAGYGDFCNQLLRNDYRLRFTV 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG+ + A+ + ++ D +++ RGGG+ DL F+ ++ Sbjct: 182 RLFPAVMQGEHVESSVLAALDAVMARQDEW-----DAVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D+ A R TPT AA + + S L + + Sbjct: 237 ACAQFPLPVITGIGHERDDTVIDFVAHTRVKTPTAAAAFLIHHQLEAASRLEAVAREIQQ 296 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 ++ + + L L + + RL+++ L H + ++ + Sbjct: 297 QAKGRMEGERLRVERLSARLSAAALQVRTRGERRLEQMAACLFHAGRQRLSDEHHRLDLY 356 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 R+ + +++ R + QQ E Sbjct: 357 AGRLGRGIPV-RMERERFRLQLLQQKCEAA 385 Score = 85.2 bits (209), Expect = 2e-14, Method: Composition-based stats. Identities = 14/134 (10%), Positives = 42/134 (31%), Gaps = 4/134 (2%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ R + + + ++ + L + R+ H + Sbjct: 301 RMEGERLRVERLSARLSAAAL---QVRTRGERRLEQMAACLFHAGRQRLSDEHHRLDLYA 357 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ + +++ + + + ++ LKRGY+ + + L Sbjct: 358 GRLGRGIPVRMERERFRLQLLQQKCEAADPVLLLKRGYSMTF-CGGKLVRKASELKGGEE 416 Query: 485 ILINFFDGQANAIV 498 I +G+ ++V Sbjct: 417 ITTRLAEGEIRSVV 430 >gi|260885887|ref|ZP_05736087.2| exodeoxyribonuclease VII, large subunit [Prevotella tannerae ATCC 51259] gi|260851406|gb|EEX71275.1| exodeoxyribonuclease VII, large subunit [Prevotella tannerae ATCC 51259] Length = 434 Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats. Identities = 87/501 (17%), Positives = 173/501 (34%), Gaps = 95/501 (18%) Query: 17 VSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAII 68 +SEL+ +K + L S + EI+ R ++GH Y L +D + ++ +A I Sbjct: 7 LSELNGLIKETIALTLESSYWIVAEINECRT-AANGHCYLELIERDQNGARLTAKANAHI 65 Query: 69 WKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTA 119 W ++ + G+ L+ +I Y + I + PS G ++ Sbjct: 66 WSNRNQLLQAHFYKVTGRALQAGLSVLIAVEIEFHELYG-YSLNITDIEPSYTIGDVVRR 124 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFP 178 + +L +G+ + +P A+I++ T A D + ++ +P + +FP Sbjct: 125 RNEILARLQADGVADLNRELSLPRPAMRFAIISAQTAAGYGDFIHQLEQSGYPFKTQLFP 184 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 +QG++ I A+ ++ + D +I+ RGGG+ DL F + +A Sbjct: 185 AFMQGEKVESSIIAALERIAA-----EQDQWDAVIIIRGGGATSDLGGFETYDLAANVAQ 239 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 +PI+ IGHE D T+ D A TPT A + +++ + L + L + Sbjct: 240 FPLPILVGIGHERDETILDLIAFKHFKTPTAVAAYLIDLQQQELALLADFSTALKRYATQ 299 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + +K L RL +++ R++ + +R+ Sbjct: 300 ALSWKKEELT---------------------RLSQKVLAFTTGFSTREHHRLYSLQSRLH 338 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 ++ KQQ + K+ + + K+R+ Sbjct: 339 I-------------LINKQQEAHSAH------LSTIKERLASATQDFLRREKDRMLLYEK 379 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 I+ LK G++ + N + + Sbjct: 380 QIEYAR-----------------------------PDRILKLGFSITR-KNGVIVKRASK 409 Query: 479 LATKTRILINFFDGQANAIVI 499 L + G +IV Sbjct: 410 LQEGDIVETQLNSGSFTSIVK 430 >gi|227485063|ref|ZP_03915379.1| possible exodeoxyribonuclease VII [Anaerococcus lactolyticus ATCC 51172] gi|227236896|gb|EEI86911.1| possible exodeoxyribonuclease VII [Anaerococcus lactolyticus ATCC 51172] Length = 394 Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats. Identities = 98/352 (27%), Positives = 161/352 (45%), Gaps = 14/352 (3%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV + + ++K ++ + + + GE+ R + H YFSLK+ + ID +I+ Sbjct: 2 RKPLSVKQFNEYIKSNIKHDPIFQRINLIGELCNIRINNY--HLYFSLKEGNDLIDVVIY 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +I F G E ++ G ++ SSK II+ + G K K++ Sbjct: 60 YYEDKEINFDFSPGKEVIIKGNLSFNNYSSKLVIIVNEVEDVGISKEFLEFLKMKEEFKS 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPK 188 +G F ++K PIP + K I +ITS GA I D L I+ + + + + PVKVQGD+ Sbjct: 120 KGYFDKENKKPIPKLVKKIGLITSKDGAAIMDFLAMINSKANDIHIYLDPVKVQGDDAEV 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 IANAI L+ L D+I++ RGGGS EDL FN I+ A+ + PIISAIG Sbjct: 180 LIANAIRTLDNL-------SLDVIVITRGGGSNEDLSSFNKRKIIEAVFAAKTPIISAIG 232 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR--LIKYKINT 306 H D TL DY +DL TPT + + +IN + ++I ++ Sbjct: 233 HNIDTTLIDYTSDLSLQTPTEVGSYLISDYVDYEKKIINKFDKAESLIKNTIVMTELKLK 292 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + + L L +E+ ++ + F ++ ++ Sbjct: 293 VLDAKIKKSSPAKLTEDKINALSSLNQEINKAIKNVFSYNENKFKNLAIKLD 344 Score = 44.7 bits (104), Expect = 0.038, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 32/117 (27%), Gaps = 13/117 (11%) Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + E K K+ + + + L I + + L Sbjct: 285 VMTELKLKVLDAKIKKSSPAKLTEDKINALSSLNQEINKAIKNVFSYNENKFKNLAIKLD 344 Query: 451 SFAYKNTLKRGYTSIQDT------NNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + + ++ + + +L +I + F DG+ A +IN Sbjct: 345 YV--EKLID-----VRKQHFEIKFDEKNVYSSHSLTEGDQIELIFVDGKLKARIING 394 >gi|317503667|ref|ZP_07961684.1| exodeoxyribonuclease VII large subunit [Prevotella salivae DSM 15606] gi|315665188|gb|EFV04838.1| exodeoxyribonuclease VII large subunit [Prevotella salivae DSM 15606] Length = 430 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 75/390 (19%), Positives = 162/390 (41%), Gaps = 30/390 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NHSRIDA 66 S+ EL+ ++ ++ + + V E+S R + GH Y L K+ ++ A Sbjct: 4 LSLFELNNLVREVISTAFDNEYWVEAELSELREVR--GHCYMELIQKELFSNTPVAKASA 61 Query: 67 IIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 WK + E G++ ++ + I+ + P G + Sbjct: 62 KCWKNKWQTLRPKFEKVSGQYLHAGLKVMLKVYPDFHEAYG-FSWIVTDINPEFTMGDMA 120 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVI- 175 + K+L EG+F Q + +P + IAVI+S A D +++ + L+ Sbjct: 121 RKRLEIVKQLQAEGIFDLQKELELPLFAQRIAVISSANAAGYGDFCHQLNDNSYGLKFYT 180 Query: 176 -IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG+E + + A+ ++N + D++++ RGGG+ D+ F+ + Sbjct: 181 RLFPAVMQGEEIEQSVIAALNKINQRMDD-----FDVVVIIRGGGATSDMSGFDTLSLSE 235 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +P+I+ IGH+ D ++ D + R TPT AA + V + + +++ + L Sbjct: 236 NVANFPLPVITGIGHDRDESVLDMVSHTRVKTPTAAAALLVDHLQEVYERVLDAQTELLT 295 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTL-SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L L + +P L+ + L ++ + ++ + Sbjct: 296 SVRHRMEMEKAQLQHLGEKIPMLFSLYKERQETMLEHRLQALTTAIQTHLVQETHRLEQL 355 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 IK + + + H+ Q ++ + Sbjct: 356 KQGIKP-TIEQQMMRENYHLSLLSQRVKSL 384 Score = 76.7 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 50/139 (35%), Gaps = 4/139 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + H ++ + + + I + + + ++ L + + + Sbjct: 296 SVRHRMEMEKAQLQHLGEKIPMLFSLYKERQETMLEHRLQALTTAIQ---THLVQETHRL 352 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 ++L I+ + ++ + +S+ ++ ++S L RGY+ N + K L Sbjct: 353 EQLKQGIKPTIEQQMMRENYHLSLLSQRVKSLDPTLLLHRGYSMTML-NGRIVKDKSLLK 411 Query: 481 TKTRILINFFDGQANAIVI 499 + I +G +I+ Sbjct: 412 SGDEIETILENGTILSIIK 430 >gi|134288335|ref|YP_001110498.1| exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis G4] gi|134132985|gb|ABO59695.1| Exodeoxyribonuclease VII large subunit [Burkholderia vietnamiensis G4] Length = 452 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 82/524 (15%), Positives = 159/524 (30%), Gaps = 91/524 (17%) Query: 1 MNPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD- 59 M+ N E S+S + +++ + V EIS +GH Y L + Sbjct: 1 MDQTPDTNEEQRGE-SLSFFLKKISTVIQQHADEAWVVAEISSLSSSRGAGHVYLDLVEH 59 Query: 60 -----NHSRIDAIIWKGTLNKI--EF------LPEEGIEFLVIGKITTFPGSSKYQIIIE 106 +++ A +W G + +F E G++ L+ T +I++ Sbjct: 60 DDAGQEIAKVRANMWAGAKQAVLGKFEAETGSKLEAGMKVLLRVAPTFHIQFG-LAVIVK 118 Query: 107 SLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 + PS G + L K + L G+ +P IAVI+ P A + D + Sbjct: 119 DIEPSFTVGDMQRKLAKIRADLSAAGVIDWNRNRNVPGEFARIAVISPPDAAGLGDFKSQ 178 Query: 166 ---ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR-PDIIILARGGGSI 221 + F + QG P EI +A+ R D +++ RGGGS Sbjct: 179 ADILEDAGLCSFEYFHARFQGKGAPDEIVSAMRTALIRNRDAAHGRHYDALVIIRGGGSA 238 Query: 222 EDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281 DL H ND I AI + +P++ IGHE D + D A A TP+ + + Sbjct: 239 ADLAHLNDFAIANAICRTPLPVMVGIGHERDSVILDEVACYSAHTPSKLIAYITSIIFNN 298 Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + + +R + Sbjct: 299 AQAAMRDWQFITAFAMRSVAVAQEATE-----------------------------AQIQ 329 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + + + + + + ++ +Q I + Sbjct: 330 AVKVGGQKWLELAEVRSLSHIEMVTATAKASLVHAEQRISSSL----------------- 372 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 I+ + + + K TL+RG Sbjct: 373 ----------------ETIRMSANHLLDTAKR---EAQNAFATVIG----MGPKRTLERG 409 Query: 462 YTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + +++ + + + + F DG+ +++ Sbjct: 410 FVITRHA-GKAVSRMEQARSLSDLELEFSDGRIAVSIVSDVTNP 452 >gi|299141434|ref|ZP_07034571.1| exodeoxyribonuclease VII, large subunit [Prevotella oris C735] gi|298577394|gb|EFI49263.1| exodeoxyribonuclease VII, large subunit [Prevotella oris C735] Length = 430 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 76/390 (19%), Positives = 159/390 (40%), Gaps = 30/390 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NHSRIDA 66 S+ EL+ ++ ++ + L V E+S R + GH Y L KD ++ A Sbjct: 4 LSLYELNNLVREVISTTLHDEYWVETELSELREVR--GHCYMELIQKDLFSNTPIAKASA 61 Query: 67 IIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 WK + G++ L+ + I+ + P G + Sbjct: 62 KCWKNKWQLLSPKFEKVTGQSLRSGLKVLLKVYPDFHEAYG-FSWIVTDINPEFTMGDMA 120 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174 + +L EG+F Q + +P + IAV++S A D +++ Sbjct: 121 RKRMEIVNQLKGEGVFDLQKELKMPLFAQRIAVVSSANAAGYGDFCNQLADNSYGLQFHT 180 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +F +QG+ + + A+ ++N+ D++++ RGGG+ D+ F+ + Sbjct: 181 RLFSAVMQGEGVEQSVIAALNEINS-----NADDFDVVVIIRGGGATSDMSGFDTLSLAE 235 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PI++ IGH+ D ++ D + R TPT AA V E + +++ ++ L + Sbjct: 236 NVANFPLPIVTGIGHDRDESVLDMVSHKRVKTPTAAAAFLVDHLERVYERVLDAQSELLS 295 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L L + +P + LDR+ + ++ + ++ R + + Sbjct: 296 NVRHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQKRLAQENRLLDSL 355 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 RIK L + + + Q + + Sbjct: 356 TQRIKPG-LERRLMRENYRLDLLSQRAKAL 384 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 53/139 (38%), Gaps = 2/139 (1%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHI 420 L+ N++ + + QH+ + + ++ + + + + R+ + + Sbjct: 293 LLSNVRHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQKRLAQENRLL 352 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L RI+ L ++ + + + ++ ++ L+RGY+ N + + K L Sbjct: 353 DSLTQRIKPGLERRLMRENYRLDLLSQRAKALDPALLLRRGYSMTTL-NGHVVKDKSQLK 411 Query: 481 TKTRILINFFDGQANAIVI 499 I+ G +I+ Sbjct: 412 PGDEIVTRLEKGTVTSIIK 430 >gi|224536255|ref|ZP_03676794.1| hypothetical protein BACCELL_01122 [Bacteroides cellulosilyticus DSM 14838] gi|224522141|gb|EEF91246.1| hypothetical protein BACCELL_01122 [Bacteroides cellulosilyticus DSM 14838] Length = 412 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 S+ EL+ ++ +E L V+ E+S R S+GH Y KD ++ Sbjct: 4 LSLLELNALVRRSLEQCLPDEYWVQAELSDVRTN-STGHCYLEFIQKDPRSNGLVAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW ++ EE GI+ LV ++ Y + ++ + P+ G + Sbjct: 63 TIWSNVYRLLKPYFEEATGQAFVSGIKVLVQVTVSFHELYG-YSLTVQDIDPTYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + K+L EEG+ + + +P +P+ IAVI+SPT A D ++ F Sbjct: 122 RRRREILKQLEEEGVLTLNKELEMPTLPQRIAVISSPTAAGYGDFCHQLKNNPRNFFFYT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QGD + + A+ + + D +++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGDRVEESVLAALDLILNRQ-----NDFDAVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AAE + + L L +L++ Sbjct: 237 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAEYLINCMDLAADELEVLITQLHD 296 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 +I + + L +P++ + +S ++ L +++ + + R+ + + Sbjct: 297 SVISRLTEEHRRLALYRNRIPSAVVRRVSDAKLALLTARKDISQAVTTSLARQQHRLDLL 356 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 357 RQRLVDASPEKMLAR 371 Score = 84.8 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 1/129 (0%) Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E + I Q+ + + E + + + R+ + I ++ Sbjct: 285 DELEVLITQLHDSVISRLTEEHRRLALYRNRIPSAVVRRVSDAKLALLTARKDISQAVTT 344 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ 493 + + + + L + + L RGY+ + + L K IL F+ G+ Sbjct: 345 SLARQQHRLDLLRQRLVDASPEKMLARGYSITL-KDGKVVKDATLLNEKDEILTRFYRGE 403 Query: 494 ANAIVINKA 502 ++V +K+ Sbjct: 404 VTSVVNHKS 412 >gi|281421172|ref|ZP_06252171.1| exodeoxyribonuclease VII, large subunit [Prevotella copri DSM 18205] gi|281404707|gb|EFB35387.1| exodeoxyribonuclease VII, large subunit [Prevotella copri DSM 18205] Length = 432 Score = 178 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 86/389 (22%), Positives = 159/389 (40%), Gaps = 29/389 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 +S+ EL+ ++ ++ +L V E+S R + GH Y L KD ++ A Sbjct: 5 FSLYELNSMVRDVISMSLPDSYWVEAELSEAREGYG-GHCYLELIEKDERSNTPIAKAHA 63 Query: 67 IIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIP-SGSGTLL 117 W+ I+ E G++ L+ + I++ + P G + Sbjct: 64 SCWRNRWIFIKPNFERITGQRIHAGMKVLLKVHAQFHENYG-FSWIVDDIDPNYTMGDMA 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174 + L E +F Q + +P + IAVI+S T A D +++ + Sbjct: 123 RKRLEIINTLKAESVFELQKELALPMFCQRIAVISSATAAGYGDFCNQLADNDYGLQFQT 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG+ + + A+ +N E D +++ RGGG+ DL F+ + Sbjct: 183 RLFPATMQGEGVEQSVIAALDSINAEWEQ-----FDCVVIIRGGGATSDLSGFDTLALAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PII+ IGHE D ++ D + R TPT AA V + + ++N + + Sbjct: 238 NVANFPLPIITGIGHERDESVLDMISFQRVKTPTAAAAFLVNHLTEVYARVMNAQEAIVQ 297 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + ++ + L+ L +P + + LDRL L N++ + RHF + Sbjct: 298 NVKHRLQVEKMRLDRLSNTIPVQFSLVKTKQGAYLDRLMSRLSTNVQSKLSEAQRHFEIL 357 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 I+ L + + Q I+ Sbjct: 358 SQNIQPI-LERKMLNESHRLQLLSQRIQA 385 Score = 95.6 bits (236), Expect = 2e-17, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 56/137 (40%), Gaps = 5/137 (3%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT----KNRIFYLHTHIK 421 +Q + + ++ ++++ L K ++ A L L + ++++ H + Sbjct: 296 VQNVKHRLQVEKMRLDRLSNTIPVQFSLVKTKQGAYLDRLMSRLSTNVQSKLSEAQRHFE 355 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L I+ IL K+ + + + ++ +Q+ + LKRGY+ + I L + Sbjct: 356 ILSQNIQPILERKMLNESHRLQLLSQRIQAQDPELLLKRGYSITL-KDGKSIRSASQLKS 414 Query: 482 KTRILINFFDGQANAIV 498 I F +G A V Sbjct: 415 GDIIETRFAEGSVKAKV 431 >gi|328907901|gb|EGG27663.1| exodeoxyribonuclease VII large subunit [Propionibacterium sp. P08] Length = 392 Score = 178 bits (450), Expect = 3e-42, Method: Composition-based stats. Identities = 96/351 (27%), Positives = 164/351 (46%), Gaps = 15/351 (4%) Query: 33 SHVCVRGEISGYRGIHSSG-HAYFSLKDNHSRIDA--IIWKGTLNKIEFLPEEGIEFLVI 89 S + V+ ++ SG + +L+D I A + L+ E G+ + Sbjct: 5 SAIWVQAQVIEVTRR--SGPTQFLTLRDPAEEISASATCHRRVLDAAG-PIESGMTVTAL 61 Query: 90 GKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIA 149 K T + + + + + P+G G LL LE+RK+ L EGLF IP +P+ I Sbjct: 62 IKPTVWSRTGRLSFEVSEITPTGEGQLLAQLERRKRLLEAEGLFDATLHKTIPVLPRGIG 121 Query: 150 VITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208 +IT RD+ + + R+P R ++ VQG + + L + P Sbjct: 122 LITGAGSDAERDVQRHATLRWPAARFVVRNTLVQGPTAAQ------QIIAALADLDADPT 175 Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268 D+I++ARGGGS+EDL F+DE +VRA+ + P++SAIGHE D + D ADLRA TPT Sbjct: 176 VDVIVIARGGGSLEDLLPFSDEALVRAVYATRTPVVSAIGHERDNPILDLVADLRASTPT 235 Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRY 326 A ++ VP ++ +ARL I R I ++ L + + N TL + Sbjct: 236 DAGKLIVPDATEQTQAVETAKARLRQAITRFIDVEMTHLAQIRSRPVMVNPAATLDIAVE 295 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 +LD + L ++ + R +H++ R+++ + + + + + Sbjct: 296 KLDSTLQRLRLATNRVLGAESRDVSHMLERVRAMSPKATLDRGYAILTDSE 346 Score = 89.8 bits (221), Expect = 9e-16, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 46/144 (31%), Gaps = 2/144 (1%) Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + Q + + + Q + + + + + M+ + + + R+ Sbjct: 247 EQTQAVETAKARLRQAITRFIDVEMTHLAQIRSRPVMV--NPAATLDIAVEKLDSTLQRL 304 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + + + VS +++ + K TL RGY + D+ IT + T + + Sbjct: 305 RLATNRVLGAESRDVSHMLERVRAMSPKATLDRGYAILTDSEGGSITSVDDTDTGAGLSV 364 Query: 488 NFFDGQANAIVINKAPPKEQPTKK 511 DG V + Sbjct: 365 YLSDGTLGVTVNSLDRRTPNRPTT 388 >gi|281423497|ref|ZP_06254410.1| exodeoxyribonuclease VII, large subunit [Prevotella oris F0302] gi|281402317|gb|EFB33148.1| exodeoxyribonuclease VII, large subunit [Prevotella oris F0302] Length = 430 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 78/390 (20%), Positives = 157/390 (40%), Gaps = 30/390 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KD-----NHSRIDA 66 S+ EL+ + ++ + L V E+S R + GH Y L KD ++ A Sbjct: 4 LSLYELNNLVHEVISTTLHDEYWVETELSELREVR--GHCYMELIQKDLFSNTPIAKASA 61 Query: 67 IIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 WK + G++ L+ + I+ + P G + Sbjct: 62 KCWKNKWQLLSPKFEKVTGQSLRSGLKVLLKVYPDFHEAYG-FSWIVTDINPEFTMGDMA 120 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF---PLRV 174 + +L EG+F Q + +P + IAVI+S A D +++ Sbjct: 121 RKRLEIVNQLKAEGVFDLQKELKMPLFAQRIAVISSANAAGYGDFCNQLADNSYGLQFHT 180 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +F +QG+ + + A+ ++N+ D++++ RGGG+ D+ F+ + Sbjct: 181 RLFSAVMQGEGVEQSVIAALNEINS-----NVDDFDVVVIIRGGGATSDMSGFDTLSLAE 235 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PII+ IGH+ D ++ D + R TPT AA V E + +++ + L + Sbjct: 236 NVANFPLPIITGIGHDRDESVLDMVSHTRVKTPTAAAAFLVDHLERVYERVLDAQNELLS 295 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHI 353 I ++ + L L + +P + LDR+ + ++ + ++ R + + Sbjct: 296 TIQHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQTRLAQENRLLDGL 355 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 RI+ L + + + Q + + Sbjct: 356 TQRIRPG-LERRLMRENYRLSLLSQRAKAL 384 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 52/139 (37%), Gaps = 2/139 (1%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHI 420 L+ IQ + + QH+ + + ++ + + + + R+ + + Sbjct: 293 LLSTIQHRMEMEKARLQHLGEKIPMLFSLYKGRQEALLDRIFINISSAVQTRLAQENRLL 352 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 L RI L ++ + +S+ ++ ++ L+RGY+ N + + K L Sbjct: 353 DGLTQRIRPGLERRLMRENYRLSLLSQRAKALDPALLLRRGYSMTTL-NGHVVKDKSQLK 411 Query: 481 TKTRILINFFDGQANAIVI 499 I+ G +I+ Sbjct: 412 PGDEIVTRLEKGTVTSIIK 430 >gi|253570356|ref|ZP_04847765.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 1_1_6] gi|251840737|gb|EES68819.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. 1_1_6] Length = 419 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R ++GH Y F KD ++ Sbjct: 6 LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 64 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW ++ EE GI+ LV + Y + + + P+ G + Sbjct: 65 MIWSNIYRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 123 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L EEG+ + + +P +P+ IAVI+S T A D ++ F Sbjct: 124 RRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYT 183 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ ++N D++++ RGGG+ DL F+ ++ Sbjct: 184 ELFPALMQGNQVEESVLAALDRINDRV-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 238 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + L L ARL Sbjct: 239 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQ 298 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L++ + L + +PN + L+ +R+ L ++L + ++ R + Sbjct: 299 GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRLELL 358 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 359 RQRVADASPDKLLSR 373 Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH I ++ H+ E ++Q + E + I + ++ + Sbjct: 277 LLIHRITESADHLEELSARLQQ---GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFAL 333 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + L RGY+ + +T +L Sbjct: 334 LAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSITL-KDGKAVTDAASLN 392 Query: 481 TKTRILINFFDGQANAIV 498 +++ G + V Sbjct: 393 PGDQLVTRLAKGSFTSEV 410 >gi|29349298|ref|NP_812801.1| exodeoxyribonuclease VII large subunit [Bacteroides thetaiotaomicron VPI-5482] gi|29341206|gb|AAO78995.1| putative exodeoxyribonuclease VII large subunit [Bacteroides thetaiotaomicron VPI-5482] Length = 417 Score = 177 bits (449), Expect = 4e-42, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R ++GH Y F KD ++ Sbjct: 4 LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW ++ EE GI+ LV + Y + + + P+ G + Sbjct: 63 MIWSNIYRLLKPYFEETTGQLFASGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L EEG+ + + +P +P+ IAVI+S T A D ++ F Sbjct: 122 RRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ ++N D++++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGNQVEESVLAALDRINDRV-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + L L ARL Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQ 296 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L++ + L + +PN + L+ +R+ L ++L + ++ R + Sbjct: 297 GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRLELL 356 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 357 RQRVADASPDKLLSR 371 Score = 95.2 bits (235), Expect = 3e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH I ++ H+ E ++Q + E + I + ++ + Sbjct: 275 LLIHRITESADHLEELSARLQQ---GAYALLEQEGRRLEMIQTRIPNLVHRKLTDARFAL 331 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + L RGY+ + +T +L Sbjct: 332 LAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSITL-KDGKAVTDAASLN 390 Query: 481 TKTRILINFFDGQANAIV 498 +++ G + V Sbjct: 391 PGDQLVTRLAKGSFTSEV 408 >gi|304313035|ref|YP_003812633.1| XseA, Exonuclease VII, large subunit [gamma proteobacterium HdN1] gi|301798768|emb|CBL47001.1| XseA, Exonuclease VII, large subunit [gamma proteobacterium HdN1] Length = 522 Score = 177 bits (448), Expect = 5e-42, Method: Composition-based stats. Identities = 89/502 (17%), Positives = 167/502 (33%), Gaps = 74/502 (14%) Query: 16 SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSR------IDAII 68 S+S+L + ++ V E+ + GH Y L + ++ +I Sbjct: 71 SLSQLLGGVSTVIARQFGEGVWTLVEVVQVQAR---GHVYLELSERDAQGQPIAKAKGMI 127 Query: 69 WKGTLNKI--EFLPEEGI------EFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119 W T KI F E G+ + LV + F + + I+ + S G L Sbjct: 128 WSATAKKILPVFERETGMVLGAGIKLLVRARP-VFHAQYGFSVEIDEIDASFTLGDLEAR 186 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC--RFPL-RVII 176 + +++L EG+F + P+ I VI A + D + RF L Sbjct: 187 KREIRERLQREGVFERNRQLAAPWDYYRILVIAPNEAAGLGDFRKEADRLARFGLCEFSY 246 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 + QG+ +EI A+ + P D I L RGGG++ DL ND + R I Sbjct: 247 AYSRFQGEGAAQEIVAALTKAFATYPKNAPP--DAIALIRGGGAVNDLAWLNDYDLARCI 304 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 + +P+++ IGHE D TL D A+ R TP+ Sbjct: 305 CDLPVPVLTGIGHERDNTLPDEVANQRFDTPSKVV------------------------- 339 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + + + + ++ + Sbjct: 340 ------------------AHIQTLIVQRAQAARDAGGFVFSAVAAQVQT-----ANLETQ 376 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL-HMLREQTKNRIFY 415 L HN Q ++Q + R + + K + +++ + + Sbjct: 377 RAIMELRHNAQAQLSEAKLSVPRLQQEITASARENLMLAQSKTELGWQAVKQSSLANVRA 436 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 ++ +R+ ++KS R + + TL RG+ ++ + +T Sbjct: 437 ARQACEESRSRVAERADVQLKSAQQQAIALMREITGQGPEKTLARGFVIVRAGDQKPVTS 496 Query: 476 KRNLATKTRILINFFDGQANAI 497 + + R + F DG + Sbjct: 497 LSHAQSLDRFNVQFKDGVLPVV 518 >gi|160883142|ref|ZP_02064145.1| hypothetical protein BACOVA_01111 [Bacteroides ovatus ATCC 8483] gi|156111367|gb|EDO13112.1| hypothetical protein BACOVA_01111 [Bacteroides ovatus ATCC 8483] Length = 429 Score = 177 bits (448), Expect = 5e-42, Method: Composition-based stats. Identities = 95/393 (24%), Positives = 169/393 (43%), Gaps = 32/393 (8%) Query: 1 MNPFSQKNSLDHPE----YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY- 54 MN Q +S E S+ EL+ ++ +E L ++ E+S R ++GH Y Sbjct: 5 MNKSKQSDSPSLGEGGERLSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYL 63 Query: 55 -FSLKDNH-----SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSK 100 F KD ++ +IW ++ EE GI+ LV + Sbjct: 64 EFVQKDPRSNNLVAKARGMIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG- 122 Query: 101 YQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVI 159 Y + + + P+ G + + +L EEG+ + + IP +P+ IAVI+S T A Sbjct: 123 YSLTVLDIDPAYTLGDMARRRREILLQLEEEGVLTLNKELEIPILPQRIAVISSATAAGY 182 Query: 160 RDILQRISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILAR 216 D ++ F +FP +QG++ + + A+ ++N D++++ R Sbjct: 183 GDFCHQLQHNSGGFFFYTELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIR 237 Query: 217 GGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVP 276 GGG+ DL F+ ++ A A +PII+ IGHE D T+ D A R TPT AAE+ + Sbjct: 238 GGGATSDLSGFDTYLLAAACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIH 297 Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPREL 335 + L L R+ L+ + L +L +PN + L+ +R+ L ++L Sbjct: 298 RVAEVAEHLEELSMRIQQGAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDL 357 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ R+ + RI + + Sbjct: 358 LQVTKALVARQSHRLELLQQRIADASPDKLLSR 390 Score = 91.4 bits (225), Expect = 3e-16, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E I+Q + LE++ + + ++ + Sbjct: 294 LLIHRVAEVAEHLEELSMRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 350 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 351 LAAKKDLLQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 409 Query: 481 TKTRILINFFDGQANAIV 498 ++ G+ ++V Sbjct: 410 PGDHLITRLSKGEVRSVV 427 >gi|298384833|ref|ZP_06994392.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 1_1_14] gi|298261977|gb|EFI04842.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 1_1_14] Length = 419 Score = 177 bits (448), Expect = 5e-42, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 162/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R ++GH Y F KD ++ Sbjct: 6 LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 64 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW ++ EE GI+ LV + Y + + + P+ G + Sbjct: 65 MIWSNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 123 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L EEG+ + + +P +P+ IAVI+S T A D ++ F Sbjct: 124 RRRREILMQLEEEGVLTLNKELEMPVLPQRIAVISSATAAGYGDFCHQLQHNSGGFFFYT 183 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ ++N D++++ RGGG+ DL F+ ++ Sbjct: 184 ELFPALMQGNQVEESVLAALDRINDRV-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 238 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + L L ARL Sbjct: 239 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRITESADHLEELSARLQQ 298 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L++ + L + +PN + L+ +R+ L ++L + ++ R + Sbjct: 299 GAYALLEQEGRRLGMIQTRIPNLVHRKLTDARFALLAAGKDLAQATQTLLSRHRHRLELL 358 Query: 354 INRIKSDFLIHNIQK 368 R+ + + Sbjct: 359 RQRVADASPDKLLSR 373 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH I ++ H+ E ++Q + E + I + ++ + Sbjct: 277 LLIHRITESADHLEELSARLQQ---GAYALLEQEGRRLGMIQTRIPNLVHRKLTDARFAL 333 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + L RGY+ + +T +L Sbjct: 334 LAAGKDLAQATQTLLSRHRHRLELLRQRVADASPDKLLSRGYSITL-KDGKAVTDAASLN 392 Query: 481 TKTRILINFFDGQANAIV 498 +++ G + V Sbjct: 393 PGDQLVTRLAKGSFTSEV 410 >gi|260171964|ref|ZP_05758376.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D2] gi|315920275|ref|ZP_07916515.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D2] gi|313694150|gb|EFS30985.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D2] Length = 429 Score = 176 bits (447), Expect = 6e-42, Method: Composition-based stats. Identities = 89/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R ++GH Y F KD ++ Sbjct: 23 LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARG 81 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW ++ EE GI+ LV + Y + + + P+ G + Sbjct: 82 MIWNNIYRLLKPYFEETTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMA 140 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L EEG+ + + IP +P+ IAV++S T A D ++ F Sbjct: 141 RRRREILLQLEEEGVLTLNKELEIPVLPQRIAVVSSATAAGYGDFCHQLQHNSGGFFFYT 200 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ ++N D++++ RGGG+ DL F+ ++ Sbjct: 201 ELFPALMQGNQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAA 255 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +PII+ IGHE D T+ D A R TPT AAE+ + + L L R+ Sbjct: 256 ACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRVAEVAEHLEELSIRIQQ 315 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L+ + L +L +PN + L+ +R+ L ++L + ++ R+ + Sbjct: 316 GAYMLLDLERRRLETLQTRIPNLVHRKLADARFSLLAAKKDLSQVTKALVARQSHRLELL 375 Query: 354 INRIKSDFLIHNIQK 368 RI + + Sbjct: 376 QQRIADASPDKLLSR 390 Score = 91.4 bits (225), Expect = 4e-16, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E I+Q + LE++ + + ++ + Sbjct: 294 LLIHRVAEVAEHLEELSIRIQQGAYM---LLDLERRRLETLQTRIPNLVHRKLADARFSL 350 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 351 LAAKKDLSQVTKALVARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 409 Query: 481 TKTRILINFFDGQANAIV 498 ++ G+ ++V Sbjct: 410 PGDHLITRLSKGEVRSVV 427 >gi|325269341|ref|ZP_08135958.1| exodeoxyribonuclease VII large subunit [Prevotella multiformis DSM 16608] gi|324988262|gb|EGC20228.1| exodeoxyribonuclease VII large subunit [Prevotella multiformis DSM 16608] Length = 438 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 86/389 (22%), Positives = 159/389 (40%), Gaps = 30/389 (7%) Query: 12 HPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SR 63 ++ +L+ + ++++ L+ V E+S R GH Y L KD+ +R Sbjct: 2 TKALTLYDLNSLVADVIDTALTRAYWVEAELSEVRENR--GHCYMELIEKDDTGNVPIAR 59 Query: 64 IDAIIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SG 114 A W+ + I G++ ++ F + I++ + P G Sbjct: 60 ASAKCWRNVWSAISPYFVRITGQQIHAGMKVMLQVHAQ-FHPQYGFSWIVDDINPEFTMG 118 Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFP 171 +L ++L EG+F Q + + IAVI+S T A D ++ F Sbjct: 119 DMLRKRRDIVRRLQAEGVFDLQKGLRLSLFAQRIAVISSETAAGYGDFCSQLETNEYGFR 178 Query: 172 LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM 231 RV IFP +QG++ + I A+ +N + D +++ RGGG+ DL F+ Sbjct: 179 FRVEIFPAVMQGEQVEQSIIAALDSINERESE-----FDAVVIIRGGGATADLSGFDTLE 233 Query: 232 IVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEAR 291 + +AN +P+I+ IGHE D ++ D + LR TPT AA + + + Sbjct: 234 LAENVANFPLPVITGIGHERDESVLDMVSFLRVKTPTAAAAFLIDQLSVTLGRIERAQTA 293 Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-RLDRLPRELEHNLEIIIFRKYRHF 350 + + + R ++ + + L +P + RL+RL R L ++ R Y Sbjct: 294 IADGVRRKMEAEKMRIRHLESHIPVLFSVVRAKEEARLERLSRNLSEKTAELLHRSYYRL 353 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQH 379 + + R++S L + + Q Sbjct: 354 DLLGQRLRSG-LKIRLSAEGHRLDMLDQR 381 Score = 70.2 bits (170), Expect = 8e-10, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 45/133 (33%), Gaps = 5/133 (3%) Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR----IFYLHTHIKKLIT 425 R+ + ++ I + + + ++ A L L + + + + L Sbjct: 299 RRKMEAEKMRIRHLESHIPVLFSVVRAKEEARLERLSRNLSEKTAELLHRSYYRLDLLGQ 358 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRI 485 R+ L ++ + + + + L L+RGY+ + L I Sbjct: 359 RLRSGLKIRLSAEGHRLDMLDQRLHLLDPSLLLERGYSITLYK-GRAVRSAAELEEGEVI 417 Query: 486 LINFFDGQANAIV 498 F G+A++ + Sbjct: 418 TTRFATGEADSRI 430 >gi|325479405|gb|EGC82501.1| exodeoxyribonuclease VII, large subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 394 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 105/378 (27%), Positives = 175/378 (46%), Gaps = 16/378 (4%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV + + + K ++ + ++ + G++S R +S H YFSLK+++ ID +I+ Sbjct: 2 RKPLSVKQFNEYFKSNIKHDPIFQNLYINGQLSNIRVNNS--HLYFSLKEDNEIIDCVIY 59 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPG-SSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 I F EEGI+ V G + + SS+ I + + G K++ Sbjct: 60 YFEDKDINFDFEEGIDVNVKGNV-FYNNYSSRIIISAKEVSEVGISENYKKFLDMKEEFR 118 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 + G F + +K IP PK + +ITS GA + D + I+ + + + ++PVKVQG E Sbjct: 119 KLGYFDEINKKAIPKYPKKVGLITSKDGAAVIDFISVINQKANDINIFLYPVKVQGLESS 178 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 I AI D+I++ RGGGS EDL FN+ IV A+ ++ PIISAI Sbjct: 179 NLIKQAI-------CDLDHKNLDVIVITRGGGSNEDLSTFNNRDIVEAVFDAKTPIISAI 231 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 GH+ D TL D +DL TPT A + +L+ L ++ ++ II I L Sbjct: 232 GHKIDLTLLDLVSDLSLQTPTEAGSYIIASYANLEKDLDDVIHKMKQIIGAEIDSFERNL 291 Query: 308 NSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + L + L+ L + +EL+ L+ + I + + + N Sbjct: 292 LFLERDLRSFHPLNNLNNIELELSFIKKELDTKLKNSLSINENRLKLIKSNLDHQNDVIN 351 Query: 366 IQKNRQHILEKQQHIEQI 383 I+K+ + K ++I Sbjct: 352 IKKSMIFVKAKDKNIYSA 369 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 36/108 (33%), Gaps = 3/108 (2%) Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 + + N + + + + ++ L + + + + L Sbjct: 289 RNLLFLERDLRSFHPLNNLNNIELELSFIKKELDTKLKNSLSINENRLKLIKSNLDHQND 348 Query: 455 KNTLKRGYTSIQ-DTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 +K+ + I + I ++L +I++ F DG A +I+ Sbjct: 349 VINIKK--SMIFVKAKDKNIYSAKSLDVGDKIILGFSDGDVKAEIIDG 394 >gi|255690528|ref|ZP_05414203.1| exodeoxyribonuclease VII, large subunit [Bacteroides finegoldii DSM 17565] gi|260623982|gb|EEX46853.1| exodeoxyribonuclease VII, large subunit [Bacteroides finegoldii DSM 17565] Length = 442 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 92/387 (23%), Positives = 170/387 (43%), Gaps = 30/387 (7%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKD 59 PFS + S+ EL+ ++ +E L ++ E+S R ++GH Y F KD Sbjct: 13 PFSSGEGGER--LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKD 69 Query: 60 NH-----SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIE 106 ++ +IW ++ EE GI+ LV + Y + + Sbjct: 70 PRSNSLIAKARGMIWNTIYRLLKPYFEETTGQPFTSGIKVLVKVTVQFHELYG-YSLTVL 128 Query: 107 SLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 + P+ G + + +L EEG+ + + +P +P+ IAVI+S T A D + Sbjct: 129 DIDPAYTLGDMARHRREILLQLEEEGVLTLNKELEMPQLPQRIAVISSATAAGYGDFCHQ 188 Query: 166 ISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 + F +FP +QG++ + + A+ ++N + D++++ RGGG+ Sbjct: 189 LQHNPGGFFFYTELFPALMQGNQVEESVLAALDRVNARIDD-----FDVVVIIRGGGATS 243 Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 DL F+ ++ A A +PII+ IGHE D T+ D A R TPT AAE+ + + Sbjct: 244 DLSGFDTYLLAAACAQFPLPIITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHRVAEVA 303 Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEI 341 L +L R+ L++ + L++L +PN + L+ +R+ L ++L Sbjct: 304 DRLEDLSVRIRQGAYMLLERERRRLDTLQARIPNLVQRKLTETRFALLTARKDLSQATMA 363 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++ R+ + RI + + Sbjct: 364 LLSRQRHRLELLQQRIADASPDKLLSR 390 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 47/140 (33%), Gaps = 4/140 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + + + I Q + E++ + + + ++ + Sbjct: 294 LLIHRVAEVADRLEDLSVRIRQGAYM---LLERERRRLDTLQARIPNLVQRKLTETRFAL 350 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + L RGY+ + +T +L Sbjct: 351 LTARKDLSQATMALLSRQRHRLELLQQRIADASPDKLLSRGYSITL-KDGKAVTDASSLK 409 Query: 481 TKTRILINFFDGQANAIVIN 500 + R++ F G+A ++V Sbjct: 410 SGDRLVTRFSKGEAQSVVEQ 429 >gi|304390379|ref|ZP_07372332.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657586|ref|ZP_07910468.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304326135|gb|EFL93380.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492058|gb|EFU81667.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 420 Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats. Identities = 90/368 (24%), Positives = 172/368 (46%), Gaps = 12/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + + +S LS ++++ V + + + +I Y + ++F +KD + + Sbjct: 12 ARETTRENPWPLSRLSENMRNYV-NRVDPTWIEAQIIEYNQRPGNRMSFFVVKDLEADMS 70 Query: 66 --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + G + G ++ K + + ++ + P+G G L LE+ Sbjct: 71 MPVKAFGGVVAAAGAALSAGARVVMRVKPDFYLKTGSLSLMASEIHPAGLGGFLEQLEQL 130 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K+KL EG+F+ +HK +PF+P+ + +I D+++ + R+P ++ I V VQ Sbjct: 131 KQKLAAEGIFAREHKQSLPFLPRRVGLICGHAARAQADVIENATRRWPLVQFEIREVAVQ 190 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ C E++ AI +L+ L E D+I++ RGGG++EDL F+DE +VRA + P Sbjct: 191 GERCAAEVSAAIAELDALAE------VDVIVVTRGGGALEDLLGFSDERVVRAAYAARTP 244 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D L D+ AD RA TPT A + VP L R+ +I I+ Sbjct: 245 IVSAVGHEEDTPLLDFVADFRASTPTDAGKRIVPDLAAEIEGLTGARTRMTALISSRIEL 304 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+++ + N L R ++ L + ++ + R +++ Sbjct: 305 GLRELDAIRSRPVMQNPQAALDERRRDINHGVEMLRSRVAAVLANQARDLAAARATLRAI 364 Query: 361 FLIHNIQK 368 +++ Sbjct: 365 SPQATLER 372 Score = 76.7 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 13/131 (9%), Positives = 41/131 (31%) Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 R ++ + + + + I + + ++ + + Sbjct: 290 ARTRMTALISSRIELGLRELDAIRSRPVMQNPQAALDERRRDINHGVEMLRSRVAAVLAN 349 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 ++ L++ + + TL+RGY ++ + +T + + G A Sbjct: 350 QARDLAAARATLRAISPQATLERGYAVLRKPDQTVVTDAGAVQKGDLLEAVLARGSLVAT 409 Query: 498 VINKAPPKEQP 508 V P +++ Sbjct: 410 VFGTNPHRDER 420 >gi|298345917|ref|YP_003718604.1| exodeoxyribonuclease VII [Mobiluncus curtisii ATCC 43063] gi|298235978|gb|ADI67110.1| exodeoxyribonuclease VII [Mobiluncus curtisii ATCC 43063] Length = 420 Score = 174 bits (440), Expect = 4e-41, Method: Composition-based stats. Identities = 90/368 (24%), Positives = 172/368 (46%), Gaps = 12/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + + +S LS ++++ V + + + +I Y + ++F +KD + + Sbjct: 12 ARETTRENPWPLSRLSENMRNYV-NRVDPTWIEAQIIEYNQRPGNRMSFFVVKDLEADMS 70 Query: 66 --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + G + G ++ K + + ++ + P+G G L LE+ Sbjct: 71 MPVKAFGGVVAAAGAALSAGARVVMRVKPDFYLKTGSLSLMASEIHPAGLGGFLEQLEQL 130 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K+KL EG+F+ +HK +PF+P+ + +I D+++ + R+P ++ I V VQ Sbjct: 131 KQKLAAEGIFAREHKQSLPFLPRRVGLICGHAARAQADVIENATRRWPLVQFEIREVAVQ 190 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ C E++ AI +L+ L E D+I++ RGGG++EDL F+DE +VRA + P Sbjct: 191 GERCAAEVSAAIAELDALAE------VDVIVVTRGGGALEDLLGFSDERVVRAAYAARTP 244 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D L D+ AD RA TPT A + VP L R+ +I I+ Sbjct: 245 IVSAVGHEEDTPLLDFVADFRASTPTDAGKRIVPDLAAEIEGLTGARTRMTALISSRIEL 304 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+++ + N L R ++ L + ++ + R +++ Sbjct: 305 GLRELDAIRSRPVMQNPKAALDERRRDINHGVEMLRSRVAAVLANQARDLAAARATLRAI 364 Query: 361 FLIHNIQK 368 +++ Sbjct: 365 SPQATLER 372 Score = 77.1 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 14/131 (10%), Positives = 41/131 (31%) Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 R ++ + + K + I + + ++ + + Sbjct: 290 ARTRMTALISSRIELGLRELDAIRSRPVMQNPKAALDERRRDINHGVEMLRSRVAAVLAN 349 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 ++ L++ + + TL+RGY ++ + +T + + G A Sbjct: 350 QARDLAAARATLRAISPQATLERGYAVLRKPDQTVVTDAGAVQKGDLLEAVLARGSLVAT 409 Query: 498 VINKAPPKEQP 508 V P +++ Sbjct: 410 VFGTNPHRDER 420 >gi|315654505|ref|ZP_07907411.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii ATCC 51333] gi|315490969|gb|EFU80588.1| exodeoxyribonuclease VII large subunit [Mobiluncus curtisii ATCC 51333] Length = 420 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 91/368 (24%), Positives = 173/368 (47%), Gaps = 12/368 (3%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + + + +S LS ++++ V + + + +I Y + ++F +KD + + Sbjct: 12 ARETTRENPWPLSRLSENMRNYV-NRVDPTWIEAQIIEYNQRPGNRMSFFVVKDLEADMS 70 Query: 66 --AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + G + G ++ K + + ++ + P+G G L LE+ Sbjct: 71 MPVKAFGGVVAAAGAALSAGARVVMRVKPDFYLKTGSLSLMASEIHPAGLGGFLEQLEQL 130 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQ 182 K+KL EG+F+ +HK +PF+P+ + +I D+++ + R+P ++ I V VQ Sbjct: 131 KQKLAAEGIFAREHKQSLPFLPRRVGLICGHAARAQADVIENATRRWPLVQFEIREVAVQ 190 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G+ C E++ AI +L+ L E D+I++ RGGG++EDL F+DE +VRA +S P Sbjct: 191 GERCAAEVSAAIAELDALAE------VDVIVVTRGGGALEDLLGFSDERVVRAAFAASTP 244 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I+SA+GHE D L D+ AD RA TPT A + VP L R+ +I I+ Sbjct: 245 IVSAVGHEEDTPLLDFVADFRASTPTDAGKRIVPDLAAEIEGLTGARTRMTALISSRIEL 304 Query: 303 KINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + L+++ + N L R ++ L + ++ + R +++ Sbjct: 305 GLRELDAIRSRPVMQNPQAALDERRRDINHGVEILRSRVAAVLANQARDLAAARATLRAI 364 Query: 361 FLIHNIQK 368 +++ Sbjct: 365 SPQATLER 372 Score = 76.7 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 13/131 (9%), Positives = 41/131 (31%) Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 R ++ + + + + I + + ++ + + Sbjct: 290 ARTRMTALISSRIELGLRELDAIRSRPVMQNPQAALDERRRDINHGVEILRSRVAAVLAN 349 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 ++ L++ + + TL+RGY ++ + +T + + G A Sbjct: 350 QARDLAAARATLRAISPQATLERGYAVLRKPDQTVVTDAGAVQKGDLLEAVLARGSLVAT 409 Query: 498 VINKAPPKEQP 508 V P +++ Sbjct: 410 VFGTNPHRDER 420 >gi|313158254|gb|EFR57656.1| exodeoxyribonuclease VII, large subunit [Alistipes sp. HGB5] Length = 415 Score = 173 bits (439), Expect = 5e-41, Method: Composition-based stats. Identities = 77/371 (20%), Positives = 146/371 (39%), Gaps = 26/371 (7%) Query: 16 SVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDAI 67 ++S+L +K + + V V EIS + + SGH Y L + ++ A+ Sbjct: 8 TLSQLQRLVKEALHERFALPVWVSAEISEIKVNY-SGHCYLELVEKGGDNGVPLAQSRAV 66 Query: 68 IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118 IW+ +I GI+ L + + + + I + P+ G + Sbjct: 67 IWRTAYPRIAGYFEAETGQRLAAGIKILAKVAVN-YHELYGFSLQITDIDPTYTLGDMER 125 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVIIF 177 + +L +EG++ + P+P + + +AV++S A +D + ++ + V +F Sbjct: 126 QRQITIAQLQQEGVWDMNREAPMPVVVQRVAVVSSANAAGYQDFRKELAKSPYRFDVTLF 185 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 +QG + I A+ + + D ++L RGGGS DL FN + +A Sbjct: 186 DAFMQGAAAEESIVAALCAVAERMDE-----FDAVVLIRGGGSASDLNCFNAYRLCAHVA 240 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 +PI++ IGH+ D ++AD A TPT A V + L +L++ Sbjct: 241 QFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTQAEGWLDYAALQLHDATK 300 Query: 298 RLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + L L L L+ R R + L L + + R+ ++ Sbjct: 301 AAMHASEVRLERLTGDLRQMSGDLLTRQRLRAEHLSALLPEAVRNFLARQATRLDNAAEL 360 Query: 357 IKSDFLIHNIQ 367 I ++ Sbjct: 361 IAGRSPERILR 371 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 58/189 (30%), Gaps = 4/189 (2%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N+ + + + + H+ + + H + +L+ + + + Sbjct: 231 NAYRLCAHVAQFPLPILTGIGHDKDTSVADMVAHTALKTPTAVAGWLVERMTQAEGWLDY 290 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + K + + + L R+ + + + + L + + + + Sbjct: 291 AALQLHDATKAAMHASEVRLERLTGDL---RQMSGDLLTRQRLRAEHLSALLPEAVRNFL 347 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 T + ++ + + L+ G+ ++ + R++ + I DG + Sbjct: 348 ARQATRLDNAAELIAGRSPERILRLGFAVVRT-GGKAVVSARDVRKGDALEIEVADGTIH 406 Query: 496 AIVINKAPP 504 V P Sbjct: 407 GTVQRSEPK 415 >gi|153809109|ref|ZP_01961777.1| hypothetical protein BACCAC_03419 [Bacteroides caccae ATCC 43185] gi|149128442|gb|EDM19661.1| hypothetical protein BACCAC_03419 [Bacteroides caccae ATCC 43185] Length = 409 Score = 173 bits (438), Expect = 7e-41, Method: Composition-based stats. Identities = 87/375 (23%), Positives = 163/375 (43%), Gaps = 28/375 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 S+ EL+ ++ +E L ++ E+S R ++GH Y KD ++ Sbjct: 4 LSLLELNALVRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFIQKDPRSNSLVAKARG 62 Query: 67 IIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 +IW ++ EE GI+ LV + Y + + + P+ G + Sbjct: 63 MIWNNIYRLLKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPTYTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + +L EEG+ + + +P +P+ IAV++S T A D ++ F Sbjct: 122 RRRREILLQLEEEGVLTLNKELEMPVLPQRIAVVSSATAAGYGDFCHQLKHNSGGFFFYT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ + + A+ +NT D++++ RGGG+ DL F+ ++ Sbjct: 182 ELFPALMQGNQVEESVLAALDCINTRISE-----FDVVVIIRGGGAASDLSGFDTYLLAA 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A A +P+I+ IGHE D T+ D A R TPT AAE+ + L L ARL Sbjct: 237 ACAQFPLPVITGIGHERDDTVLDSVAHTRVKTPTAAAELLIQRVGEAAERLEELSARLQQ 296 Query: 295 IIIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 L++ + L ++ +P + LS +R+ L ++L + ++ R+ + Sbjct: 297 GAYTLLEQEQRRLVTMQARIPALVHRKLSEARFTLLTAQKDLSQVTQNLLSRQRYRLELL 356 Query: 354 INRIKSDFLIHNIQK 368 R+ + + + Sbjct: 357 QQRVADNSPEKLLSR 371 Score = 94.1 bits (232), Expect = 6e-17, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 45/138 (32%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LI + + + + E ++Q + E++ + + + ++ + Sbjct: 275 LLIQRVGEAAERLEELSARLQQ---GAYTLLEQEQRRLVTMQARIPALVHRKLSEARFTL 331 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + + + L RGY+ + +T L Sbjct: 332 LTAQKDLSQVTQNLLSRQRYRLELLQQRVADNSPEKLLSRGYSITL-KDGKAVTDASLLQ 390 Query: 481 TKTRILINFFDGQANAIV 498 ++ G+ + V Sbjct: 391 PGDQLTTRLLKGEVQSTV 408 >gi|256426147|ref|YP_003126800.1| exodeoxyribonuclease VII [Chitinophaga pinensis DSM 2588] gi|256041055|gb|ACU64599.1| Exodeoxyribonuclease VII [Chitinophaga pinensis DSM 2588] Length = 475 Score = 173 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 78/522 (14%), Positives = 182/522 (34%), Gaps = 86/522 (16%) Query: 16 SVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 ++S+L+ ++ +++ S V +I+ + + G+ YF + KD ++I Sbjct: 8 TLSQLAAGIQGTIKNAFSGQSYWVVADITSHSFYPAKGYHYFDMVEKDPRSHQMIAKIST 67 Query: 67 IIWKGTLNKIE-------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118 W +I+ ++ LV + F ++ + + PS G L Sbjct: 68 TAWGNGSTRIKEFENVTGQRFSNDMQVLVRVAVE-FHPVYGLKLSLMDIDPSYTIGQLEQ 126 Query: 119 ALEKRKKKLLEE----------GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168 + ++L+ E G + + + + IAVI+S + A +D + + Sbjct: 127 QKQATLQRLVTECADIVQKTPDGYMTRNKALRLNPVIQRIAVISSASSAGYQDFMHTMQS 186 Query: 169 ---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 ++ + VQG+ ++ + + + + D +++ RGGG+ DL Sbjct: 187 NAYKYIFYTDNYFTAVQGEANATQVCIQLDAIIA-----SGKQYDTVVIIRGGGAQTDLL 241 Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285 F+ + +A+A +P+I+ IGH + T+ D A TPT AAE+ + + +L Sbjct: 242 LFDQYALGKAVAGFPVPVITGIGHHKNETITDMLAHTATKTPTRAAELIIAHNRTFEEAL 301 Query: 286 INLEARLNNIIIRLIK-YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 + ++++ + ++I K + + S LS R L R + + + Sbjct: 302 LTQQSQIIIRMQQMIAGRKKQLSSLHTGIINRSRDLLSVHRDGLTRAKQAIPQRARHTLL 361 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 R+ + + ++ Sbjct: 362 RQRNAISQLSGQL----------------------------------------------- 374 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 + + + I+ ++ + +++ + L++G+ Sbjct: 375 -LAKPGQVTASRLQELAHIRKDIQVYARKLLQQQQQKLVHHETVVRIMSPAALLQKGFAM 433 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 +Q IT L+ I + D +A + +K Sbjct: 434 VQHK-GQIITSAAQLSPGDEITVQMADAGVHATITSKTTTDG 474 >gi|207092659|ref|ZP_03240446.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori HPKX_438_AG0C1] Length = 138 Score = 173 bits (437), Expect = 8e-41, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 79/136 (58%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S S HAYFSLKD+ S I +++KG Sbjct: 3 VLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSSHAYFSLKDSQSVIKCVLFKGNA 62 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF 133 N+++F +EG E +V G I+ + YQI + P G+L ALE+ K+KL +G F Sbjct: 63 NRLKFALKEGQEVVVFGGISVYVPRGDYQINCFEIEPKEIGSLTLALEQLKEKLRLKGYF 122 Query: 134 SDQHKNPIPFIPKIIA 149 ++K P P PK +A Sbjct: 123 DKENKLPKPHFPKRVA 138 >gi|299783414|gb|ADJ41412.1| Exodeoxyribonuclease 7 large subunit [Lactobacillus fermentum CECT 5716] Length = 336 Score = 173 bits (437), Expect = 9e-41, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 145/357 (40%), Gaps = 29/357 (8%) Query: 150 VITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208 ++TS AV DI+ + R ++++ +P +VQG++ EIA I +++ Sbjct: 1 MVTSNDAAVKHDIITTVRRRNRLVQLVFYPTRVQGEQAAGEIAAQIKRVSDA------ND 54 Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268 D +I+ARGGGS+EDLW FN+E++ RAI +++P+IS+IGHETD T+ D AD+R TPT Sbjct: 55 YDAVIVARGGGSLEDLWPFNEEVVARAINQANLPVISSIGHETDTTITDLVADVRTATPT 114 Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLI---KYKINTLNSLLKALPNSDQTLSCSR 325 AAE + + E L + + + L ++ Sbjct: 115 AAAEAVTKWPLADVIAEVEREQTLLYTAEKRQLANLKQRLLALTESYFLKQPERLYERQV 174 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 ++D L L+ +++ + R + ++ + K + + QQ + ++ Sbjct: 175 QQVDELTGRLQSGARLLLASRSRRVQELQTSLEHHSPRAQLAKQQMQLARLQQGLRAGMR 234 Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 H E+ + R+ L + + + + + Sbjct: 235 GH------------------LEEERGRLIRLEEGRRASTNLLLQATQNYQRGQAQRLDTL 276 Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + L + + L RG+ + + + LA + F GQA V Sbjct: 277 IKQLDALSPLKVLGRGFALVT-KDEQVVAGVDQLAVGDEATVKFEQGQAQVTVTKIE 332 >gi|330901798|gb|EGH33217.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. japonica str. M301072PT] Length = 201 Score = 173 bits (437), Expect = 9e-41, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 81/136 (59%), Gaps = 2/136 (1%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 +PF+ + LD +VS+L+ + ++E S + V GEIS +SGH YF+LKD+ Sbjct: 16 DPFA-RLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNL-SRPASGHVYFTLKDSG 73 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +++ +++ + ++ ++G++ V GK++ F G YQ+I++++ P+G G L A + Sbjct: 74 AQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFD 133 Query: 122 KRKKKLLEEGLFSDQH 137 K KL +EGLFS Q Sbjct: 134 ALKAKLSDEGLFSAQR 149 >gi|333029307|ref|ZP_08457368.1| Exonuclease VII, large subunit [Bacteroides coprosuis DSM 18011] gi|332739904|gb|EGJ70386.1| Exonuclease VII, large subunit [Bacteroides coprosuis DSM 18011] Length = 417 Score = 172 bits (436), Expect = 1e-40, Method: Composition-based stats. Identities = 91/387 (23%), Positives = 177/387 (45%), Gaps = 28/387 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + S+ EL+ ++ +E+ L ++ EIS R +SGH Y KD Sbjct: 1 MSENILSLLELNNLVRRGIEACLPDTYWIQAEISDVRSN-TSGHCYLEFIQKDERTSSLI 59 Query: 62 SRIDAIIWKGTLNKIEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-G 112 ++ +IW + + EE G++ LV ++T Y + ++++ P+ Sbjct: 60 AKARGVIWSNVFHVLRPYFEETTGETFHSGLKVLVEVEVTFHELYG-YSLTVQNIDPTYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS-CRFP 171 G ++ K+L EEG+ + + +P + + IAVI+S T A D ++ + Sbjct: 119 LGDMVKRRTDILKQLEEEGVLTLNKELELPLLTQRIAVISSATAAGYGDFCDQLKGNSWG 178 Query: 172 LRVI--IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + +FP +QG++ + I NA+ + K D++++ RGGG+ DL F+ Sbjct: 179 ISFYTELFPAIMQGEQVERTILNALDAILARK-----KDFDVVVIIRGGGATSDLSGFDT 233 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 ++ + A +PII+ IGHE D T+ D A+ R TPT AAE V ++ L +L Sbjct: 234 YLLAASCAQFPMPIITGIGHERDDTVLDVVANTRVKTPTAAAEFLVNRMMNVIGRLNDLS 293 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQT-LSCSRYRLDRLPRELEHNLEIIIFRKYR 348 +L +++ ++ + LN L+ LP++ ++ +++ L L+ + + + + Sbjct: 294 FQLKTSVVQKLQMETERLNRLIARLPSNVNLSIANENFKVKDLYNRLKLSTNLYLKDQQY 353 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILE 375 I IKS ++K + + Sbjct: 354 LLRSISLEIKSISPYEILKKGYALLSQ 380 Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 4/142 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 FL++ + + + ++ V Q L+ IA L I + + Sbjct: 277 FLVNRMMNVIGRLNDLSFQLKTSVVQKLQMETERLNRLIARLP---SNVNLSIANENFKV 333 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 K L R++ + +K + + ++S + LK+GY + N I+ +++ Sbjct: 334 KDLYNRLKLSTNLYLKDQQYLLRSISLEIKSISPYEILKKGYALL-SQNGVIISSIKDIE 392 Query: 481 TKTRILINFFDGQANAIVINKA 502 + I+I +DG++ A + K Sbjct: 393 EDSDIIIKMYDGESKAHIEKKT 414 >gi|300726767|ref|ZP_07060197.1| exodeoxyribonuclease VII, large subunit [Prevotella bryantii B14] gi|299775880|gb|EFI72460.1| exodeoxyribonuclease VII, large subunit [Prevotella bryantii B14] Length = 431 Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats. Identities = 76/397 (19%), Positives = 159/397 (40%), Gaps = 51/397 (12%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 S+ EL++ + ++ L + V+ E+S YR ++GH + L KDNH ++ A Sbjct: 5 LSLYELNHLVHDVIAIQLPDSIWVQAELSEYRE--NNGHCFMELIEKDNHLNTPIAKASA 62 Query: 67 IIWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLL 117 W+ I G++ ++ + +I+ + P+ G + Sbjct: 63 KCWRNRWVYIRAGFERITGMHLRAGMKIMLQVHAEFHENYG-FSWMIDDIDPTFTLGDMA 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + + L +EG+F Q + IP + +AVI+S A D ++ + Sbjct: 122 RKRLEIIQVLKDEGVFDLQKQLVIPMFCQRVAVISSVHAAGYGDFCHQMQNNEYGLSFNI 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +FP +QG++ K + A+ +N E D++++ RGGG+ D+ F+ ++ Sbjct: 182 ELFPAVMQGEQIEKSVIRALNLINERYEE-----FDVVVIIRGGGATSDMSGFDTLVLAE 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PII+ IGHE D ++ D ++ R TPT AA + + + + N + + Sbjct: 237 NVANFPLPIITGIGHERDESVLDMISNTRVKTPTAAATFLIEHLAQVYNRVQNASDFIFS 296 Query: 295 IIIRLIKYKINTLNSLLKALP-----------------------NSDQTLSCSRYRLDRL 331 + + + + L +P + + LDRL Sbjct: 297 YVRERMTREKMRIQHLGGRIPLMFSLVKTSHLRKLDAIESKLNNQVGRLILQQFQYLDRL 356 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + ++ + ++ I ++ +++ Sbjct: 357 QMAMLPAIQRKLNKEQYRLQMIEQQVMLSDPTLLLKR 393 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 50/161 (31%), Gaps = 5/161 (3%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L + + Y + + I S + + + I I + ++ Sbjct: 276 LIEHLAQVYNRVQNASDFIFSYV-RERMTREKMRIQHLGGRIPLMFSLV---KTSHLRKL 331 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 AI L Q I ++ +L + + K+ + + + + L Sbjct: 332 DAIESKLNNQVGRLILQQFQYLDRLQMAMLPAIQRKLNKEQYRLQMIEQQVMLSDPTLLL 391 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 KRGY+ N + L I+ +G+ +IV Sbjct: 392 KRGYSITLL-NGKVVKDASCLHVGDEIITRVENGEIRSIVK 431 >gi|313677304|ref|YP_004055300.1| exonuclease vii, large subunit [Marivirga tractuosa DSM 4126] gi|312944002|gb|ADR23192.1| Exonuclease VII, large subunit [Marivirga tractuosa DSM 4126] Length = 415 Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 156/368 (42%), Gaps = 28/368 (7%) Query: 16 SVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSL--KDNHS-----RIDAI 67 S+++L+ +K + + L V EI R +GH Y KD S + A Sbjct: 5 SLTDLNLLIKDTLNTQLEPSYWVVAEIGELRE-ARNGHCYLEFVEKDEESNQLLSKSRAT 63 Query: 68 IWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLT 118 IW + I + G+ L ++ + ++ + P+ G Sbjct: 64 IWSYSYRSISAWFQSITGESLKAGMTVLANIQVQFHEVYG-LSLNVKDIDPNFTLGERAR 122 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR---FPLRVI 175 ++ +L E+G+F +P+P +P+ IA+I++ + A D + +I + L+ Sbjct: 123 KKQEIIAQLKEDGVFEMNKSHPLPMVPQRIAIISAESAAGYGDFMNQILDNNYEYKLQTQ 182 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 +F +QGD+ + I +++ Q++ E D ++L RGGG+ DL F+D + Sbjct: 183 LFVATMQGDKAAQTIISSLHQIHEQMEN-----FDAVVLIRGGGAQVDLDCFDDYELAAH 237 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IA IP+ + IGHE D T+ D A + TPT AE + + L + Sbjct: 238 IAQFPIPVFTGIGHERDETICDLVAHTKLKTPTAVAEFLIRGMRIYEEKLNLATNNILAY 297 Query: 296 IIRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + ++ + + LN ++ + + + + +L R +++++++ ++ Sbjct: 298 LNQKVEREQHKLNDRKHSMRYALKKHFNKAENQLSRYQQKMQYDIRKSFQNTHQKLEIYQ 357 Query: 355 NRIKSDFL 362 ++ Sbjct: 358 KTLELINP 365 Score = 57.8 bits (138), Expect = 5e-06, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 2/125 (1%) Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 I+ + + E+ + H +R K + + ++++ + ++ H Sbjct: 293 NILAYLNQKVEREQHKLNDRKHSMRYALKKHFNKAENQLSRYQQKMQYDIRKSFQNTHQK 352 Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + I + L+ K+GY+ N I + L + + + + V + Sbjct: 353 LEIYQKTLELINPDTVFKKGYSYTSL-NGKSIM-GQKLKKGDELKTITANQEIKSKVESV 410 Query: 502 APPKE 506 K+ Sbjct: 411 GKRKK 415 >gi|146301514|ref|YP_001196105.1| exodeoxyribonuclease VII [Flavobacterium johnsoniae UW101] gi|146155932|gb|ABQ06786.1| Exodeoxyribonuclease VII large subunit [Flavobacterium johnsoniae UW101] Length = 478 Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats. Identities = 95/514 (18%), Positives = 188/514 (36%), Gaps = 83/514 (16%) Query: 17 VSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLK---DNHSRIDAII--- 68 +S+L+ ++ + + V +I+ + YF L D S I A I Sbjct: 9 LSQLNDQIQDTINARFKGQTYWVVADITNHSFKADKKIHYFELVEKSDKSSAITAKIMGK 68 Query: 69 -W-KGTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119 W G L ++F G LV + F + + + S G L Sbjct: 69 SWGSGALRILDFESSTGQRFTNNLHVLVQVSVD-FHPLYGLSVNLLDIDSSFMLGILEQQ 127 Query: 120 LEKRKKKLLEEGLF---------SDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-- 168 ++L++E F + + + + + +AVI+S + A D + Sbjct: 128 RNATLERLVKENDFIHKEGDGYSTLNSRLKLGAVIQRVAVISSSSSAGNEDFRHTMQHND 187 Query: 169 -RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227 + ++ + VQGD K N ++++ T D+I++ RGGGS D F Sbjct: 188 FGYVFQIDDYHTVVQGDNNAKLFLNKLIEVY-----NTGIPYDVIVITRGGGSQSDFLIF 242 Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 ++ I RA+A IP+I+ IGH+ + ++ D A TPT AAE + + ++ Sbjct: 243 DNYNIGRAVAKFPIPVITGIGHQKNISITDLMAHTHTKTPTKAAEFIIAHNRSFELGILA 302 Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 L+ + +L N LNSL A+ ++ + L Sbjct: 303 LQKNIVIKSQQLFLQYHNELNSLKNAVAHNARKL-------------------------- 336 Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 I ++ ++ +QHI Q + L + + + Sbjct: 337 ------------------ISVQKEELMMARQHIVQTGRSLLNDKKQQLLLTAQLTLQRPQ 378 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + +++++ L ++ SH ++S + + ++ + ++ L RGY ++ Sbjct: 379 GIIQQ---KNSNLRHLKANLKIFTSHYLRSRKLQLEDCRKTIKLLSPQHVLSRGYAVVRV 435 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + I ++ +I I D + V K Sbjct: 436 HD-KIINGAGSIQEGEQIEILLKDAILKSTVNEK 468 >gi|162453675|ref|YP_001616042.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So ce 56'] gi|161164257|emb|CAN95562.1| exodeoxyribonuclease VII, large subunit [Sorangium cellulosum 'So ce 56'] Length = 547 Score = 170 bits (430), Expect = 5e-40, Method: Composition-based stats. Identities = 74/377 (19%), Positives = 146/377 (38%), Gaps = 23/377 (6%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKD----- 59 + ++ +++VS+L+ ++ +E+ + + GE+ GY F L + Sbjct: 106 PRPAVAASDFTVSKLNGQVRAALEAAFPASIWLVGEVCGYNRAAHKSIVGFELVERDALG 165 Query: 60 -NHSRIDAIIWKGTLNKI---------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 +++ A +++ +I F E+ I+ V G++ + Y+ +IE L Sbjct: 166 KEIAQVKATLFESARAEIERRLAAAGDPFQIEDEIQIRVRGRVELYVPWGSYRFLIEDLD 225 Query: 110 P-SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168 G E+ ++L EEGL P P +P + ++TS D+L Sbjct: 226 VGYTLGEAARRREEICRRLAEEGLLDRNRSLPFPALPLRVGLVTSLGSDAYNDVLGTFRE 285 Query: 169 -RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227 F RV+ V+VQG + + NA+ D++++ RGGGS DL F Sbjct: 286 SGFAFRVVAHGVRVQGRQTEPSVLNALDYFRARAAE-----LDVLLICRGGGSRTDLAWF 340 Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 + E I RA+A +P++ IGHE D + D+ AA + V + + Sbjct: 341 DSEPIARAVATFPLPVVVGIGHERDISALDFVGFREKTPTAAAAMLVQRVSDARDEVESS 400 Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 L + L+ L + + ++ ++ +L R+L + Sbjct: 401 LLSILDQGRRVLRSASSDLTRRAARVPRSASLLIARRAGQLQEAVRQLRQGARRDLDAAS 460 Query: 348 RHFNHIINRIKSDFLIH 364 + + + + Sbjct: 461 HRVDEMASLLGPRSSRR 477 Score = 59.4 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 15/154 (9%), Positives = 41/154 (26%), Gaps = 22/154 (14%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q+ E + + I+ Q R + + + I +++ + Sbjct: 387 VQRVSDARDEVESSLLSILDQGRRVLRSASSDLTRRAARVPRSASLLIARRAGQLQEAVR 446 Query: 426 RIEFILSHKIKSCHTSVSITTRIL----------------------QSFAYKNTLKRGYT 463 ++ + + V +L + + ++RGY Sbjct: 447 QLRQGARRDLDAASHRVDEMASLLGPRSSRRLALESERLESRERRLRLLDPRRVVERGYA 506 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 ++ T +T T ++ G Sbjct: 507 ILRTTEGAVLTDAARAPQGTTLIAELKRGVLRLR 540 >gi|330984147|gb|EGH82250.1| XseA, Exonuclease VII, large subunit [Pseudomonas syringae pv. lachrymans str. M301315] Length = 460 Score = 169 bits (429), Expect = 7e-40, Method: Composition-based stats. Identities = 85/505 (16%), Positives = 166/505 (32%), Gaps = 72/505 (14%) Query: 16 SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHS------RIDAII 68 +S +K ++ S V V EI G H Y L + + + +I Sbjct: 6 PLSAFLGQVKVTLKERFSAGVWVTAEILSMSGGA---HRYLELVEYDADRRQIAKATGVI 62 Query: 69 WKGTLNKI-EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTAL 120 WK + +F G ++ L + ++IE + P+ G + + Sbjct: 63 WKSATGMLEKFKVATGNALQADMKVLCRVSPKFHESYG-FSLVIEEIDPTYTLGDMELRI 121 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL---RVIIF 177 + + L E+G+ K P +AVI A + D L + Sbjct: 122 KAIRDFLSEKGVIQSNRKLAKPQDFFRLAVIAPADAAGLGDFRTEADRIGALGLCEFTYY 181 Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 QG+ +I A+ Q+ D +++ RGGG L+ N + + A+ Sbjct: 182 HASFQGETAGDQIVEAMAQVVAAHRVNP---YDALVIIRGGGDKAGLYQLNHKRLCHAVC 238 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 +P++ IGH+ D L D A+LR PTP+ ++ + L+ Sbjct: 239 RVPLPVLIGIGHDRDRLLLDELANLRFPTPSLVISHIKETMISNANAGHDAFEALDRAAE 298 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ L DQ + L+R + E ++ R + Sbjct: 299 SVLAGAEEHS------LRLLDQLHQSAHQVLERAEQGQVRVYEALLSRAEQKIGEAEQV- 351 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 ++ +E++V R ++ + ++ + Sbjct: 352 ------------------SERSLEKLVDHGDRLADQAADTSAKLVGQVFSDSEKLLDQAE 393 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 H K+LIT + + +GY ++++ FIT+K Sbjct: 394 AHAKQLITEVMSA----------------------NPLAIMAQGYGYVKNSAGQFITRKA 431 Query: 478 NLATKTRILINFFDGQANAIVINKA 502 + I DG+ +A+V ++ Sbjct: 432 KALAGDTLTITLQDGKFDAVVTSEQ 456 >gi|111225493|ref|YP_716287.1| exodeoxyribonuclease VII large subunit [Frankia alni ACN14a] gi|111153025|emb|CAJ64772.1| exodeoxyribonuclease VII large subunit (Exonuclease VII large subunit) [Frankia alni ACN14a] Length = 346 Score = 169 bits (429), Expect = 7e-40, Method: Composition-based stats. Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 9/309 (2%) Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEK 122 + + + + +G +V GK + PG + + + P G+G LL LE+ Sbjct: 2 SLRVTCPRAVCDAVGPALVDGARVVVWGKPSFHPGRGTLALAVVEIRPLGAGALLARLEQ 61 Query: 123 RKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKV 181 K L EGLF+ K PF+P + +IT A RD+++ R+P +R+++ V V Sbjct: 62 LKATLAAEGLFAASRKRRPPFLPAAVGLITGRASAAERDVVENARRRWPAVRIVLREVAV 121 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 QG ++ +A L+E P ++I++ARGGGS+EDL F+DE ++RA+ + Sbjct: 122 QGPLAVSQVIDA------LRELDGRPEVEVIVIARGGGSLEDLLPFSDEALLRAVVAART 175 Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 P++SAIGHE D L D+ AD+RA TPT AA+ VP +++ L R ++ + Sbjct: 176 PVVSAIGHEQDAPLLDFVADVRASTPTDAAKRVVPDVGEQTAAVAQLRGRARRVVEHRLD 235 Query: 302 YKINTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L + L + L+ + L + + R R+++ Sbjct: 236 REERRLADMRGRPVLAAPARDLARRSDDVAALLARSRRCVHHALDVTGRDLVATRARVRA 295 Query: 360 DFLIHNIQK 368 + + Sbjct: 296 LSPAATLDR 304 Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 38/132 (28%), Gaps = 1/132 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q Q R E++ + + + L+ R Sbjct: 215 QTAAVAQLRGRARRVVEHRLDREERRLADMRGRPVLAAPARDLARRSDDVAALLARSRRC 274 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINF 489 + H + + T +++ + TL RGY Q + + + R+ I Sbjct: 275 VHHALDVTGRDLVATRARVRALSPAATLDRGYAVAQRAADGAVVRDPAEVGPGERLTIRV 334 Query: 490 FDGQANAIVINK 501 G A V ++ Sbjct: 335 AGGAFPAAVTDE 346 >gi|229552485|ref|ZP_04441210.1| possible exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1] gi|229314037|gb|EEN80010.1| possible exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1] Length = 155 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 64/155 (41%), Positives = 104/155 (67%), Gaps = 5/155 (3%) Query: 11 DHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII 68 +V+ L+ +LK +++ L+ V + GEIS YR G+ YFSLKD+H++I A++ Sbjct: 4 TSQYLTVTALTQYLKRKFDADPYLAKVYLTGEISNYRKRV--GNQYFSLKDDHAKIGALM 61 Query: 69 WKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLL 128 ++ +K++F EEG++ LV+G+++ + S +Y++I+E L P G G L A E+ KKKL Sbjct: 62 FRNAFSKLQFNLEEGMKVLVVGRVSLYEPSGEYRLIVERLEPDGVGALYQAFEQLKKKLA 121 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL 163 EGLF H+ P+P P+ +AV+TSP+GAVI+DI+ Sbjct: 122 AEGLFER-HQRPLPLFPQRVAVVTSPSGAVIQDII 155 >gi|239617914|ref|YP_002941236.1| Exodeoxyribonuclease VII [Kosmotoga olearia TBF 19.5.1] gi|239506745|gb|ACR80232.1| Exodeoxyribonuclease VII [Kosmotoga olearia TBF 19.5.1] Length = 509 Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 83/432 (19%), Positives = 161/432 (37%), Gaps = 17/432 (3%) Query: 82 EGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLF---SDQHK 138 EG + VIGK+ ++Y + + + P G G + +K +KL EGL+ Sbjct: 86 EGELYSVIGKLVFRVTQNRYVVEVIKIEPYGKGAIEKRRQKILEKLRSEGLYPVKQLSSL 145 Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLR-VIIFPVKVQGDECPKEIANAILQL 197 + IA++ SP + D L+ + + +P+ ++G KE+ +A+ + Sbjct: 146 LELGEPILDIAILASPNTRGLSDFLRMLQDSPLIPDFTYYPISIEGASAAKELVSALGKA 205 Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257 N +I++ RGGG+ L + +DE + RA+A+S +P+I IGH D TL D Sbjct: 206 NNRAHQ-------LIVIVRGGGAQGGLLYLDDESLARAVASSKLPVIVGIGHSEDKTLLD 258 Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 Y A + TPT + SL LE +L+++ L+ ++ + S + L Sbjct: 259 YVASMSFETPTAVGREISQINRDYIHSLSELEEKLDSVFSELLSSFVSNIQSRSRILSAY 318 Query: 318 DQTLSCSRYRLDRLPRELE-HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 L + ++ + N + S+ +K + L Sbjct: 319 SIERMIKFDHQKLLSFVRRLNRIDFLTDNMKEALNRSRKNLISNSANIMNEKTKWFWLNL 378 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 ++ ++H + K + + + KKL + Sbjct: 379 KE-----FRRHENELSSRIKNFEERITPEIIDLERFLMEKSRDFKKLTGYFSSNAKSFYR 433 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 + ++S L +G + D I ++ +LI DG + Sbjct: 434 WQRERLQRYIAEIRSINPIYALVKGGAIVMDEEGKAIVSIEDVKIGDEVLIRLSDGSLRS 493 Query: 497 IVINKAPPKEQP 508 ++ K K++ Sbjct: 494 EILEKITTKKKN 505 >gi|90019847|ref|YP_525674.1| exodeoxyribonuclease VII large subunit [Saccharophagus degradans 2-40] gi|89949447|gb|ABD79462.1| Exodeoxyribonuclease VII large subunit [Saccharophagus degradans 2-40] Length = 555 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 85/537 (15%), Positives = 167/537 (31%), Gaps = 63/537 (11%) Query: 22 YHLKHIVESNLS-HVCVRGEISGYRGIHSSG-HAYFSLK--DNH--SRIDAIIWKGTL-- 73 + +++ L VR EI + S G H L D ++ A IW + Sbjct: 19 NRIGTALKTQLPGSYWVRAEI--LKADTSKGNHLSLELASYDGSQGAKARAWIWSSNINI 76 Query: 74 -----NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKL 127 + G++ L ++ P +++E++ P G + L+ +++L Sbjct: 77 VSSFEQSTGSSLKAGLKILFQCRVQFHPEFG-LSLVVENIDPKFTLGDMEAKLQAIRERL 135 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPVKVQGD 184 + P +AV++ + A + D + +P QG Sbjct: 136 TSLNEINRNRYLDKPKDFCRVAVVSPESAAGLGDFKTIADRLEKYNLCKFNYYPSLFQGA 195 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 I +AI Q+ E + D + + RGGG L+ N+ I R I S IP++ Sbjct: 196 NAVASIVSAISQVVVDIENG--NQYDALAIVRGGGDKAGLYQLNEIKIARCICRSPIPVL 253 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 IGHE D T+ D A+ R TP+ A L + + Sbjct: 254 VGIGHERDSTILDEVANCRLATPSLVASFIQEAIVKNARDAKFNYELLVRSSQSISSFAK 313 Query: 305 NTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN------------ 351 L + + L +R ++ L H ++I R Sbjct: 314 QELRDYRANISLLSHKKLESARRQVTEHNTSLTHVPNLLIQNAKRQNEENYINIKLFSGR 373 Query: 352 --HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + S+ I + +I HI+Q+ +R + + Q Sbjct: 374 SIQQAKELVSESFRSAINDTKVNIRSIGSHIQQLKIDVIRRAHHSTSTAKSSVQHYNIQM 433 Query: 410 KN--------------------------RIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + + I+ + + + + + + Sbjct: 434 RQGASNSAHQAKSSVLYKYEESLKATKYYLGQQRNAIENESKSLRVNAAQSLTAIKSDIK 493 Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 I + L +G+ I +T K+++ + + + DG A ++ Sbjct: 494 ILVERVLLLDPSKILAKGFALIMSNEKKVLTTKKDVLKQKNVSLRLKDGFVEAHILE 550 >gi|313205289|ref|YP_004043946.1| exonuclease vii, large subunit [Paludibacter propionicigenes WB4] gi|312444605|gb|ADQ80961.1| Exonuclease VII, large subunit [Paludibacter propionicigenes WB4] Length = 409 Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats. Identities = 77/391 (19%), Positives = 159/391 (40%), Gaps = 28/391 (7%) Query: 16 SVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAI 67 ++SEL+ ++ + N +R EIS R GH Y L KD+ ++I Sbjct: 5 TLSELAAQIQQTIRLNFDTPQWIRAEISELRENPG-GHCYLELIEKDSESDALLAKIKTT 63 Query: 68 IWKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLT 118 IW T ++ + GI LV + F G + + + + P+ G + Sbjct: 64 IWASTYRMLKPYFESSTGQVLRSGINVLVAVTVE-FHGVYGFSLNVRDIDPTFTIGEMAA 122 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175 K ++L +G+ + P+ +P+ +A+I+S T A D ++ F + Sbjct: 123 RRLKIIRQLESDGIVDMNKQLPLSQVPQRLAIISSATAAGYGDFCDQLKNNPAHFTFYIK 182 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 +FP +QGD+ I A+ ++ E D +I+ RGGG+ DL F+ + Sbjct: 183 LFPAVMQGDQAEATIIAALEKIYDNLEM-----FDAVIIIRGGGATTDLACFDSYELALN 237 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 A +PII+ IGH+ D ++ D A TPT AE + + ++ + + + Sbjct: 238 CAQFPLPIIAGIGHQRDVSILDMVAHTSLKTPTAVAEFLISKMHTADDYVNSVVSDIGFL 297 Query: 296 IIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + I+ + + + + ++ LD L+ ++ + + ++ + + Sbjct: 298 VRNNIETESRFIIQTQLQIKQTLRSWVLKKKHLLDGQKNRLKSSVRMQLLKQNNKLSLLD 357 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 I++ + ++ + + I + Sbjct: 358 KNIETHSPVFLLKHGYTITTLNGKRVTSINQ 388 Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 45/111 (40%), Gaps = 1/111 (0%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 I E + I +++ ++ + + R++ + ++ + +S+ + Sbjct: 300 NNIETESRFIIQTQLQIKQTLRSWVLKKKHLLDGQKNRLKSSVRMQLLKQNNKLSLLDKN 359 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 +++ + LK GYT N +T + + +I +GQ ++ +I Sbjct: 360 IETHSPVFLLKHGYTITTL-NGKRVTSINQIKSGDKIRTLLSNGQFDSEII 409 >gi|28493610|ref|NP_787771.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei str. Twist] gi|28572806|ref|NP_789586.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei TW08/27] gi|81839118|sp|Q83FR7|EX7L_TROWT RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|81839161|sp|Q83HE6|EX7L_TROW8 RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|28410939|emb|CAD67324.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei TW08/27] gi|28476652|gb|AAO44740.1| exodeoxyribonuclease VII large subunit [Tropheryma whipplei str. Twist] Length = 404 Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 158/375 (42%), Gaps = 32/375 (8%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 VS ++ L ++ L + GE++ + +LKD + + Sbjct: 23 VSHITGRLSSLL-GELPATWIEGEVTQLSPRRIG--VFLTLKD--------M--NESKHL 69 Query: 77 EFLP---------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 EF E G + GK+ + S + ++ + G G L+ + + + +L Sbjct: 70 EFFLPFDAFKDEVEVGNRVKIHGKLEFWATSGQIKVKGFEIQSVGIGELIERIARLRVQL 129 Query: 128 LEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDEC 186 EGL+ + +PFIPK+I ++T +D++ + R+P + +QG C Sbjct: 130 ALEGLYEHKRP--LPFIPKLIGLVTGQNSDAEKDVVTNVLLRWPAAKFCTIYASMQGASC 187 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 E +AI +L+ D+II+ARGGGS DL F+DE ++RA+ P+ISA Sbjct: 188 VSETISAIQKLDA------NNDVDVIIVARGGGSFHDLIGFSDEQMIRAVFAIKTPLISA 241 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGHE D + D ADLRA TPT AA+ VP + + + + L +I Sbjct: 242 IGHEADRPILDEVADLRASTPTDAAKRVVPDIADEKRLIKSAMSFLKKSYEPVIDKIKCD 301 Query: 307 LNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 S +A N + ++ R +D +++ + + I + + + Sbjct: 302 TLSWSQAFSNPFETFIAPRRREIDLFYQQMLTVVWANFSKTETEIAAIKKHLLAISPQNT 361 Query: 366 IQKNRQHILEKQQHI 380 + + I ++ I Sbjct: 362 LVRGYAMIEDETGRI 376 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%) Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 I I ++ ++ T ++ + L + + +NTL RGY I+D Sbjct: 317 IAPRRREIDLFYQQMLTVVWANFSKTETEIAAIKKHLLAISPQNTLVRGYAMIEDETGRI 376 Query: 473 ITQKRNLATKTRILINFFDGQANAIVIN 500 I+ L+ + + DG A + Sbjct: 377 ISSADKLSAGDTVTLRLHDGLVRAEITQ 404 >gi|213024009|ref|ZP_03338456.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 118 Score = 167 bits (423), Expect = 4e-39, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 1/117 (0%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L E+ K Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQTK 118 >gi|294614727|ref|ZP_06694629.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636] gi|291592465|gb|EFF24072.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636] Length = 207 Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats. Identities = 51/126 (40%), Positives = 82/126 (65%), Gaps = 3/126 (2%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 + +V+ L+ +LK +++ L V + GEIS +R ++ H YFSLKD+H++I AI Sbjct: 1 MAQEYLTVTTLTRYLKRKFDADPYLERVYLTGEISNFRLRANA-HQYFSLKDDHAKISAI 59 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++KG K+ F P+EG++ LV+G+I+ + YQI +E + P G G L LE+RK+KL Sbjct: 60 MFKGAFQKLRFQPKEGMKVLVVGRISLYEAGGSYQIYVEHMEPDGIGALYQELEERKEKL 119 Query: 128 LEEGLF 133 ++EGLF Sbjct: 120 MKEGLF 125 >gi|329121104|ref|ZP_08249735.1| exodeoxyribonuclease VII large subunit [Dialister micraerophilus DSM 19965] gi|327471266|gb|EGF16720.1| exodeoxyribonuclease VII large subunit [Dialister micraerophilus DSM 19965] Length = 353 Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 11/307 (3%) Query: 13 PEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 Y+V+E S + ++ N ++ V G +S R H SG+ YFSL D +I I Sbjct: 2 KVYTVNECSEIISESIKKNYLNKNINVEGTVSSLRE-HFSGNCYFSLIDESYKISCKINH 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGS-SKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 L+ ++ + G + ++ G I + K ++ E +I SG + EK K+L E Sbjct: 61 MHLSFVKRKLKSGEKVIISGNI-LYDKYFGKPLLLAERVIVSGKSQIQIEKEKLFKELEE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 +G FS K +P I+ +ITS +GAV+ DI++ R + I+ VQG++ Sbjct: 120 KGYFSVYSKKALPEYVFIVGIITSKSGAVVHDIIKTGRLRNKNVSYYIYNSAVQGEKAAL 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 ++ I N + +PD++I+ARGGGS ED FN+ +++ A+ NS IP++SAIG Sbjct: 180 GMSKMIKLANK-----SDVKPDVLIIARGGGSEEDFKPFNERILLDAVYNSEIPVVSAIG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D L D AD RA TPT AAE+ V ++ L S + L + ++ K + Sbjct: 235 HEVDDVLLDMVADYRASTPTQAAELVVEEEKVLYSKIEFQLNCLKQVFKFKMENKKSYFI 294 Query: 309 SLLKALP 315 L L Sbjct: 295 INLYKLR 301 >gi|255318729|ref|ZP_05359956.1| exodeoxyribonuclease 7 large subunit [Acinetobacter radioresistens SK82] gi|262378091|ref|ZP_06071248.1| exodeoxyribonuclease VII, large subunit [Acinetobacter radioresistens SH164] gi|255304227|gb|EET83417.1| exodeoxyribonuclease 7 large subunit [Acinetobacter radioresistens SK82] gi|262299376|gb|EEY87288.1| exodeoxyribonuclease VII, large subunit [Acinetobacter radioresistens SH164] Length = 421 Score = 166 bits (420), Expect = 8e-39, Method: Composition-based stats. Identities = 82/380 (21%), Positives = 140/380 (36%), Gaps = 24/380 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH------- 61 + P+ S+SE ++ I++ V VR EI GH Y L + Sbjct: 1 MADPQLSLSEYLSGVQEIIQLTFDESVWVRAEIRNLNIK--GGHYYLELAEKEQQSDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + ++F E GIE L+ K F + + IE + S Sbjct: 59 ASCRATIWKFSAANIVLKFERESGIELSKDLNVLIKVKAR-FDPQYGFSVNIEDIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL + PF + + VI A + D + Sbjct: 118 LGDIARQYQQLVERLTQEGLIERNRQLVTPFDIQHVLVIAPQQAAGLGDFKKDADVLQKY 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 I QG PK I A+ PD+I++ RGGG++ DL + ND Sbjct: 178 GVCNFIYQTATFQGQTAPKSIIEALRSALKHWANDFNYPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + S+P+ IGHE D T+ D A TP+ + N Sbjct: 238 YELAALLCKRSVPVWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNTISENVQQVQNTF 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 R+ + + + + ++ + LS S LD L + + + + + Sbjct: 298 QRIKTLSQYQLMVYQSQNDQYMRLIRTLSHSQLSESAKTLDVLKDVVHCCAQQQVRQTKQ 357 Query: 349 HFNHIINRIKSDFLIHNIQK 368 H + ++ I H + K Sbjct: 358 HIDSLLKEILLQNPRHILNK 377 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 14/132 (10%), Positives = 50/132 (37%), Gaps = 1/132 (0%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +++ + Q ++I + + + + + ++R + +++ + L + Sbjct: 288 ENVQQVQNTFQRIKTLSQYQLMVYQSQNDQYMRLIRTLSHSQLSESAKTLDVLKDVVHCC 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 +++ + + + ++ L +GY ++ N I + L I + Sbjct: 348 AQQQVRQTKQHIDSLLKEILLQNPRHILNKGYAIVRY-NGRAIRSVQQLNVIQNIQLELQ 406 Query: 491 DGQANAIVINKA 502 DG+ A ++ + Sbjct: 407 DGKIQAEIVKGS 418 >gi|288930020|ref|ZP_06423861.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288328679|gb|EFC67269.1| exodeoxyribonuclease VII, large subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 432 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 71/384 (18%), Positives = 143/384 (37%), Gaps = 28/384 (7%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDA 66 ++ EL+ ++ + + V EIS R I GH Y L KD ++ A Sbjct: 6 LTLYELNQMVRDALAITMPDEYWVEAEISEMREIR--GHCYMELVQKDAAGNTPVAKASA 63 Query: 67 IIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 WK + G++ ++ + I+ + P+ G + Sbjct: 64 KCWKNKWAFLRPHFERNANQILRAGLKVRLLVYADFHEAYG-FSWIVADIDPTYTLGDMA 122 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPLRV 174 + + L ++G+F Q +P + +AVI+S A D + + V Sbjct: 123 RKRLEIVQTLKQQGVFDLQKDFRLPLFAQRVAVISSEQAAGYGDFCRHLHENEWHLQFSV 182 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 +F +QG+ + + A+ +N D++++ RGGG+ DL F+ + Sbjct: 183 QLFAATMQGEGVERSVIAALNAINERLAD-----FDVVVIIRGGGATSDLSGFDSLPLAE 237 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 +AN +PII+ IGH+ D ++ D + R TPT AA V +++ + + + Sbjct: 238 NVANFPLPIITGIGHDRDESVLDMVSFRRVKTPTAAAAFLVEHLAETYQRILDAQEEMVH 297 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 ++ R ++ + L L + +P + + + N ++ + Sbjct: 298 LVQRRMELERIQLARLTEKVPMLFSLVRTRQEKRLENLALRMQNTITTTLQRQDLRLQRL 357 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQ 378 + K + QQ Sbjct: 358 ALALPTHAERLLTKAAHRLELLQQ 381 Score = 76.7 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 49/150 (32%), Gaps = 3/150 (2%) Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHMLREQ- 408 + + + ++ + R + Q + + V + +++++ L + + Sbjct: 283 ETYQRILDAQEEMVHLVQRRMELERIQLARLTEKVPMLFSLVRTRQEKRLENLALRMQNT 342 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDT 468 + +++L + + + + + ++S L +GY+ Sbjct: 343 ITTTLQRQDLRLQRLALALPTHAERLLTKAAHRLELLQQAVKSHDPSLLLAKGYSITTR- 401 Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIV 498 + +L I+ G+ ++V Sbjct: 402 GGKVVRNANDLQKGDVIVTQLQKGKVKSVV 431 >gi|313891740|ref|ZP_07825345.1| Exonuclease VII, large subunit [Dialister microaerophilus UPII 345-E] gi|313119734|gb|EFR42921.1| Exonuclease VII, large subunit [Dialister microaerophilus UPII 345-E] Length = 353 Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats. Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 11/307 (3%) Query: 13 PEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 Y+V+E S + ++ N ++ V G +S R H SG+ YFSL D +I I Sbjct: 2 KVYTVNECSEIISESIKKNYLNKNINVEGTVSSLRE-HFSGNCYFSLIDESYKISCKINH 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGS-SKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 L+ ++ + G + ++ G I + K ++ E +I SG + EK K+L E Sbjct: 61 MHLSFVKRKLKSGEKVIISGNI-LYDKYFGKPLLLAERVIVSGKSQIQIEKEKLFKELEE 119 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF-PLRVIIFPVKVQGDECPK 188 +G FS K +P I+ +ITS +GAV+ DI++ R + I+ VQG++ Sbjct: 120 KGYFSVYSKKALPEYVFIVGIITSKSGAVVHDIIKTGRLRNKNVSYYIYNSAVQGEKAAL 179 Query: 189 EIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIG 248 E++ I N + +PD++I+ARGGG+ ED FN+ +++ A+ NS IP++SAIG Sbjct: 180 EMSKMIKLANK-----SDVKPDVLIIARGGGAEEDFKPFNERILLDAVYNSEIPVVSAIG 234 Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 HE D L D AD RA TPT AAE+ V ++ L S + L + ++ K + Sbjct: 235 HEVDDVLLDMVADYRASTPTQAAELVVEEEKVLYSKIEFQLNCLKQVFKFKMENKKSDFI 294 Query: 309 SLLKALP 315 L L Sbjct: 295 INLYKLR 301 >gi|315609100|ref|ZP_07884069.1| exodeoxyribonuclease VII large subunit [Prevotella buccae ATCC 33574] gi|315249170|gb|EFU29190.1| exodeoxyribonuclease VII large subunit [Prevotella buccae ATCC 33574] Length = 435 Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats. Identities = 79/418 (18%), Positives = 161/418 (38%), Gaps = 30/418 (7%) Query: 13 PEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRI 64 S+ EL+ ++ +E ++ V+ E+S R + GH Y L KD +R Sbjct: 6 KPLSLYELNALVRETIEVDMPDSYWVQAELSDVRESY--GHCYMELIQKDEASRTPIARA 63 Query: 65 DAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115 A W+ I G++ ++ + I++ + + G Sbjct: 64 RANCWRNRWMLIRPAFERLTGQGLRSGMKVMLQVHAQFHENFG-FSWIVDDIDATYTMGD 122 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRFPL 172 + ++ +L EG+F Q + +P + +AV++S + A D ++ F Sbjct: 123 MARRRQEIIARLRAEGVFDLQKELRLPLFTQRVAVVSSASAAGYGDFADQLAANDYGFCF 182 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 +F +QG++ + + A+ +N D++++ RGGG+ DL F+ + Sbjct: 183 HTELFAATMQGEQVEQSVIAALDAINARA-----GEFDVVVIIRGGGATSDLSGFDTLAL 237 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 +AN +P+I+ IGHE D ++ D A R TPT AA V +++ + R+ Sbjct: 238 AENVANFPLPVITGIGHERDESVLDMVAHTRVKTPTAAAAFLVARLADVEARIDGAGERM 297 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFN 351 ++ ++ + ++ L A+P + RL+ L L ++ + R Sbjct: 298 VRVVRLRMERERMRIDKLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQ 357 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + ++ L +Q + Q +E + L + Q Sbjct: 358 LVGRDLQP-LLERRLQTETHRLALLGQRVEALNPDRLLRRGYSITLHEGRVVRDPRQL 414 Score = 87.1 bits (214), Expect = 7e-15, Method: Composition-based stats. Identities = 13/123 (10%), Positives = 45/123 (36%), Gaps = 2/123 (1%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + + + ++ +L Q NR+ ++ + ++ +L ++++ Sbjct: 314 KLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQLVGRDLQPLLERRLQT 373 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 +++ + +++ L+RGY+ + R L+ I G + Sbjct: 374 ETHRLALLGQRVEALNPDRLLRRGYSITLHE-GRVVRDPRQLSAGDMIETRLEKGILKSR 432 Query: 498 VIN 500 + + Sbjct: 433 IES 435 >gi|323344544|ref|ZP_08084769.1| exodeoxyribonuclease VII large subunit [Prevotella oralis ATCC 33269] gi|323094671|gb|EFZ37247.1| exodeoxyribonuclease VII large subunit [Prevotella oralis ATCC 33269] Length = 461 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 72/385 (18%), Positives = 154/385 (40%), Gaps = 30/385 (7%) Query: 16 SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDN-----HSRIDAI 67 ++ EL+ + + +++ V E++ + GH Y L K+ ++ A Sbjct: 33 TLYELNQLVSDTIAASMPDEYWVEAELAEIHEVR--GHCYMELIQKEPFSNTPVAKATAK 90 Query: 68 IWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLT 118 WK +I E G++ ++ + I+ + P+ G + Sbjct: 91 CWKTKWMQIRPHFERITKQRMHAGLKIMLKVHADFHAAYG-FAWIVTDIDPAYTMGDMAR 149 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVI 175 ++ L EG+F Q + + + IAV++S A D ++ C + Sbjct: 150 KRQEIITVLKREGVFELQKELVLGMFAQRIAVVSSANAAGYGDFCNQLECNEYGLHFDIE 209 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 +F +QG++ + I A+ +N + D++++ RGGG+ DL F+ + Sbjct: 210 LFQAVMQGEQVEQSIIAALNAINERIDD-----FDVVVIIRGGGATSDLSGFDTLALAEN 264 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 +AN +PII+ IGHE D ++ D + R TPT AA + + + + + +++ + Sbjct: 265 VANFPLPIITGIGHERDESVLDMVSYARVKTPTAAAAYLIGHLAEVLARVEDARSQIVSY 324 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + R ++++ LN+L +P + RL+ L + + + H + + Sbjct: 325 VRRRMEHEKLRLNALSNKIPILFSAVKVSQTARLNSLFMRTVSAMNRHLTAEKHHLDMLS 384 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQH 379 + + I + Q Sbjct: 385 AALFP-SVRRRITAEYHRLEMLVQR 408 Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 2/138 (1%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-IFYLHTHIKKLI 424 +++ +H + + + + + + ++ L M NR + H+ L Sbjct: 325 VRRRMEHEKLRLNALSNKIPILFSAVKVSQTARLNSLFMRTVSAMNRHLTAEKHHLDMLS 384 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + +I + + + + + + L++GY+ N + R+L Sbjct: 385 AALFPSVRRRITAEYHRLEMLVQRTDAVNPDILLRKGYSITLH-NGKLLRDVRSLRVGDE 443 Query: 485 ILINFFDGQANAIVINKA 502 I G ++V + Sbjct: 444 IETKVEHGSVRSVVKAEE 461 >gi|144897278|emb|CAM74142.1| exodeoxyribonuclease 7 large subunit [Magnetospirillum gryphiswaldense MSR-1] Length = 311 Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats. Identities = 101/339 (29%), Positives = 166/339 (48%), Gaps = 29/339 (8%) Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 +A+ + NTL PRPD++I+ARGGGS+EDLW FN+E++VRA A S+IP+ISA+GH Sbjct: 1 MASRLAGFNTL-PANGVPRPDVLIVARGGGSVEDLWAFNEEVVVRAAAASAIPLISAVGH 59 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 ETD TL D+A+DLRAPTPT AAEMAVPV+ L +++ + ARL R ++ + N + Sbjct: 60 ETDTTLIDFASDLRAPTPTAAAEMAVPVRAELVATVADCAARLVGSTARGLEDRRNRVQH 119 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L +ALPN + L + +LD L+ L ++ R++ + +++ + Sbjct: 120 LARALPNPRRVLDDAGLKLDDRAERLKLALPNLLHRRHADLDRSAAQLR--HPRELLAAK 177 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + + +K + + K+R +++ R+ Sbjct: 178 THQLDSLSTRLTHAIKSAV------------------QAEKSRQEKHSLRLEQTGQRLAP 219 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 ++ + + + ++L+S++YKN L RG+ I+D + + I F Sbjct: 220 AVTRLLAEQARRLDASAKLLESYSYKNVLDRGFAVIRDDAGKLV-SAADAQAGAAWSIEF 278 Query: 490 FDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 DG + +V APP KK + QG L Sbjct: 279 KDGTTDVVVGANAPPAPPRPKKGK-------DDVRQGSL 310 >gi|288927146|ref|ZP_06421030.1| exodeoxyribonuclease VII, large subunit [Prevotella buccae D17] gi|288336083|gb|EFC74480.1| exodeoxyribonuclease VII, large subunit [Prevotella buccae D17] Length = 435 Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats. Identities = 79/418 (18%), Positives = 162/418 (38%), Gaps = 30/418 (7%) Query: 13 PEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRI 64 S+ EL+ ++ +E ++ V+ E+S R + GH Y L KD +R Sbjct: 6 KPLSLYELNALVRETIEVDMPDSYWVQAELSDVRESY--GHCYMELIQKDEASRTPIARA 63 Query: 65 DAIIWKGTLNKIEFL--------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115 A W+ I G++ ++ + I++ + + G Sbjct: 64 RANCWRNRWMLIRPAFERLTGQGLRSGMKVMLQVHAQFHENFG-FSWIVDDIDATYTMGD 122 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRFPL 172 + ++ +L EG+F Q + +P + +AV++S + A D ++ F Sbjct: 123 MARRRQEIIAQLRAEGVFDLQKELRLPLFTQRVAVVSSASAAGYGDFADQLAANDYGFRF 182 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 +F +QG++ + + A+ +N D++++ RGGG+ DL F+ + Sbjct: 183 HTELFAATMQGEQVEQSVIAALDAINARA-----GEFDVVVIIRGGGATSDLSGFDTLAL 237 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 +AN +P+I+ IGHE D ++ D A R TPT AA V +++ + R+ Sbjct: 238 AENVANFPLPVITGIGHERDESVLDMVAHTRVKTPTAAAAFLVARLADVEARIDGAGERM 297 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRELEHNLEIIIFRKYRHFN 351 ++ ++ + ++ L A+P + RL+ L L ++ + R Sbjct: 298 VRVVRLRMERERMRIDKLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQ 357 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + ++ L +Q + Q +E + L + +Q Sbjct: 358 LVGRDLQP-LLERRLQAETHRLALLGQRVEALNPDRLLRRGYSITLHEGRVVRDPQQL 414 Score = 86.7 bits (213), Expect = 9e-15, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 45/123 (36%), Gaps = 2/123 (1%) Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQT-KNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + + + ++ +L Q NR+ ++ + ++ +L ++++ Sbjct: 314 KLASAIPLQFSLVRSRGEARLNVLQSRLVQLVDNRLERAAHRLQLVGRDLQPLLERRLQA 373 Query: 438 CHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 +++ + +++ L+RGY+ + + L+ I G + Sbjct: 374 ETHRLALLGQRVEALNPDRLLRRGYSITLHE-GRVVRDPQQLSAGDMIETRLEKGILKSR 432 Query: 498 VIN 500 + + Sbjct: 433 IES 435 >gi|298480215|ref|ZP_06998413.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D22] gi|298273496|gb|EFI15059.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. D22] Length = 414 Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%) Query: 24 LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75 ++ +E L ++ E+S R ++GH Y F KD ++ +IW Sbjct: 17 VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 75 Query: 76 IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126 ++ EE GI+ LV + Y + + + P+ G + + + Sbjct: 76 LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREILLQ 134 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183 L EEG+ + + +P +P+ +AVI+S T A D ++ +FP +QG Sbjct: 135 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 194 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ + + A+ ++N D++++ RGGG+ DL F+ ++ A A +PI Sbjct: 195 NQVEESVLVALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 249 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I+ IGHE D T+ D A R TPT AAE+ + + L L RL L++ + Sbjct: 250 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 309 Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L +L +PN + L+ +R+ L ++L + ++ R+ + RI Sbjct: 310 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 369 Query: 363 IHNIQK 368 + + Sbjct: 370 DKLLSR 375 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E ++Q + E++ A+ + ++ + Sbjct: 279 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 335 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 336 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 394 Query: 481 TKTRILINFFDGQANAIV 498 R+ G+ ++V Sbjct: 395 PGDRLTTRLLKGEVQSVV 412 >gi|237714363|ref|ZP_04544844.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D1] gi|262408195|ref|ZP_06084742.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_22] gi|229445527|gb|EEO51318.1| exodeoxyribonuclease VII large subunit [Bacteroides sp. D1] gi|262353747|gb|EEZ02840.1| exodeoxyribonuclease VII, large subunit [Bacteroides sp. 2_1_22] Length = 414 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%) Query: 24 LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75 ++ +E L ++ E+S R ++GH Y F KD ++ +IW Sbjct: 17 VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 75 Query: 76 IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126 ++ EE GI+ LV + Y + + + P+ G + + + Sbjct: 76 LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMALRRREILLQ 134 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183 L EEG+ + + +P +P+ +AVI+S T A D ++ +FP +QG Sbjct: 135 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 194 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ + + A+ ++N D++++ RGGG+ DL F+ ++ A A +PI Sbjct: 195 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 249 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I+ IGHE D T+ D A R TPT AAE+ + + L L RL L++ + Sbjct: 250 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 309 Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L +L +PN + L+ +R+ L ++L + ++ R+ + RI Sbjct: 310 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 369 Query: 363 IHNIQK 368 + + Sbjct: 370 DKLLSR 375 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E ++Q + E++ A+ + ++ + Sbjct: 279 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 335 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 336 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 394 Query: 481 TKTRILINFFDGQANAIV 498 R+ G+ ++V Sbjct: 395 PGDRLTTRLLKGEVQSVV 412 >gi|294650170|ref|ZP_06727547.1| exodeoxyribonuclease VII large subunit [Acinetobacter haemolyticus ATCC 19194] gi|292823940|gb|EFF82766.1| exodeoxyribonuclease VII large subunit [Acinetobacter haemolyticus ATCC 19194] Length = 420 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 73/397 (18%), Positives = 147/397 (37%), Gaps = 24/397 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P++S+S+ ++ +++ + V V+ EI GH Y L KD Sbjct: 1 MSEPQFSLSDYLSTVQEVIQITFNEPVWVKAEIRNLNIK--GGHYYLELAEKDESTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPS-G 112 + IWK K ++F E GIE LV + F + + +E + S Sbjct: 59 ASCKGTIWKFIAQKMVLKFERESGIELSKDLNVLVKVRAK-FDPQYGFSVNVEDIDSSYT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L EGL + P PF + + VI A + D + Sbjct: 118 LGDIARRYQQILERLTSEGLLNKNKLIPTPFDIQNVLVIAPENAAGLGDFKKDADALEKS 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + I ++ PD+I++ RGGG++ DL + ND Sbjct: 178 GVCHFKYYSATFQGNTAAQSIITSLSNGLREWATDFNTPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + +A ++PI IGHE D T+ D A+ TP+ + +++ Sbjct: 238 YELAALLAKRTVPIWVGIGHEKDRTILDEVANRSFDTPSKVIGGIRNLIADRTQDVLDSF 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + I + + ++ + ++ + +D + L + + I Sbjct: 298 QTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQINEANKSVDLMRSTLHYLAQQQIKLATN 357 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 ++ + + K + + + I I + Sbjct: 358 QVESLMRETLIQNPRNVMAKGYGIVRNEGKAIRSIQQ 394 Score = 80.6 bits (197), Expect = 6e-13, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 6/132 (4%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + I I + + + M++ +I + + + + + ++ Sbjct: 289 RTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQINEANKSVDLMRSTLHYLA 348 Query: 432 SHKIKSCHTSVSITTRILQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +IK V R ++ +N + +GY +++ I + ++ ++ + Sbjct: 349 QQQIKLATNQVESLMR--ETLIQNPRNVMAKGYGIVRNE-GKAIRSIQQIS-GDKVQVEL 404 Query: 490 FDGQANAIVINK 501 DG A V Sbjct: 405 QDGTIQANVTKV 416 >gi|293370350|ref|ZP_06616905.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CMC 3f] gi|292634571|gb|EFF53105.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CMC 3f] Length = 410 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%) Query: 24 LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75 ++ +E L ++ E+S R ++GH Y F KD ++ +IW Sbjct: 13 VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 71 Query: 76 IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126 ++ EE GI+ LV + Y + + + P+ G + + + Sbjct: 72 LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREILLQ 130 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183 L EEG+ + + +P +P+ +AVI+S T A D ++ +FP +QG Sbjct: 131 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 190 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ + + A+ ++N D++++ RGGG+ DL F+ ++ A A +PI Sbjct: 191 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 245 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I+ IGHE D T+ D A R TPT AAE+ + + L L RL L++ + Sbjct: 246 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 305 Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L +L +PN + L+ +R+ L ++L + ++ R+ + RI Sbjct: 306 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 365 Query: 363 IHNIQK 368 + + Sbjct: 366 DKLLSR 371 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E ++Q + E++ A+ + ++ + Sbjct: 275 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 331 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 332 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 390 Query: 481 TKTRILINFFDGQANAIV 498 R+ G+ ++V Sbjct: 391 PGDRLTTRLLKGEVQSVV 408 >gi|325121550|gb|ADY81073.1| putative exodeoxyribonuclease VII large subunit [Acinetobacter calcoaceticus PHEA-2] Length = 421 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 82/408 (20%), Positives = 150/408 (36%), Gaps = 24/408 (5%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P++S+SE ++ ++ V V+ EI GH Y L KD Sbjct: 1 MSEPQFSLSEYLGTVQEVIRVAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDAETDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGGS+ DL + ND Sbjct: 178 GVCHFVYHTATFQGNTAATSLIESLGSGLRQWASTFNFPPDLIVIIRGGGSVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + S+PI IGHE D T+ D A TP+ ++ Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSM 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + I + + LL + + Q LS + LD++ ++ + + + Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHIKSLAQSQLSSAHRLLDQMKERIQFSSQQQVKFSLA 357 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 ++ I K + + + I I + I +E + Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQISSPAIAIEMR 405 Score = 74.4 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 2/136 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E ++ I I + + +LH ++ ++++ H + ++ RI+F Sbjct: 288 ERVQEAVDSMQTIKLLSQHQITTYQSKNDQLLHHIKSLAQSQLSSAHRLLDQMKERIQFS 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + + + K +GY ++ I +++ I I Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PAIAIEMR 405 Query: 491 DGQANAIVINKAPPKE 506 DG A + P +E Sbjct: 406 DGVVEANITQVIPNEE 421 >gi|294645488|ref|ZP_06723189.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CC 2a] gi|294806752|ref|ZP_06765579.1| exodeoxyribonuclease VII, large subunit [Bacteroides xylanisolvens SD CC 1b] gi|292639189|gb|EFF57506.1| exodeoxyribonuclease VII, large subunit [Bacteroides ovatus SD CC 2a] gi|294446034|gb|EFG14674.1| exodeoxyribonuclease VII, large subunit [Bacteroides xylanisolvens SD CC 1b] Length = 410 Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%) Query: 24 LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75 ++ +E L ++ E+S R ++GH Y F KD ++ +IW Sbjct: 13 VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 71 Query: 76 IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126 ++ EE GI+ LV + Y + + + P+ G + + + Sbjct: 72 LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMALRRREILLQ 130 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP---LRVIIFPVKVQG 183 L EEG+ + + +P +P+ +AVI+S T A D ++ +FP +QG Sbjct: 131 LEEEGVLTLNKELEMPVLPQRVAVISSATAAGYGDFCHQLQHNPGGFYFYTELFPALMQG 190 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ + + A+ ++N D++++ RGGG+ DL F+ ++ A A +PI Sbjct: 191 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 245 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I+ IGHE D T+ D A R TPT AAE+ + + L L RL L++ + Sbjct: 246 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 305 Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L +L +PN + L+ +R+ L ++L + ++ R+ + RI Sbjct: 306 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 365 Query: 363 IHNIQK 368 + + Sbjct: 366 DKLLSR 371 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E ++Q + E++ A+ + ++ + Sbjct: 275 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 331 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 332 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 390 Query: 481 TKTRILINFFDGQANAIV 498 R+ G+ ++V Sbjct: 391 PGDRLTTRLLKGEVQSVV 408 >gi|256026617|ref|ZP_05440451.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11] gi|289764617|ref|ZP_06523995.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11] gi|289716172|gb|EFD80184.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11] Length = 259 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 88/230 (38%), Positives = 126/230 (54%), Gaps = 8/230 (3%) Query: 79 LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQH 137 +EG + G + + ++Q+++ + G+L LEK K+KL E G F ++H Sbjct: 3 DLKEGDLIKLFGDVGFYEVRGEFQVLVRYIEKQNTLGSLYAKLEKVKEKLSELGYFDEKH 62 Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAILQ 196 K +P PK I V+T+ TGA ++DI++ RF + + I+P KVQG +EI I Sbjct: 63 KRDLPKFPKNIGVVTALTGAALQDIIKTTRKRFNSINIYIYPAKVQGIGAEQEIIKGIET 122 Query: 197 LNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA 256 LN ++E D II RGGGSIEDLW FN+E + A NS PIISA+GHE D+ L+ Sbjct: 123 LNKIEE------IDFIIAGRGGGSIEDLWAFNEEEVAMAFFNSKKPIISAVGHEIDFLLS 176 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 D AD RA TPT A E++VP KE L L E + ++ + Sbjct: 177 DLTADKRAATPTQAMELSVPEKESLLDDLKAREIYITKLLKSYVDNMKRE 226 >gi|300770619|ref|ZP_07080498.1| exodeoxyribonuclease VII large subunit [Sphingobacterium spiritivorum ATCC 33861] gi|300763095|gb|EFK59912.1| exodeoxyribonuclease VII large subunit [Sphingobacterium spiritivorum ATCC 33861] Length = 424 Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats. Identities = 78/394 (19%), Positives = 160/394 (40%), Gaps = 25/394 (6%) Query: 11 DHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL---KDNH--SRI 64 + +S+ E++ ++ + ++ E++ SGH Y L KD + I Sbjct: 7 NKTIFSLLEVTKSIQKTIADRYKSMYWIKAEMNKLNHYTHSGHCYPELVEKKDGKIVAEI 66 Query: 65 DAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGT 115 +I+WK N+I EGI L I+ + + I + P+ G Sbjct: 67 RSILWKADYNRININFMKTVREPLREGITMLFQASIS-YDPMYGLSLKIVDIDPTFSLGE 125 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPL 172 L + ++L EEG++ P P IPK IA+I+ T + D + I + Sbjct: 126 LEKEKLESIQRLKEEGIYDLNKSLPFPVIPKRIAIISVETSKGLSDFYKIIHQNPWGYRF 185 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 ++P +QGD+ I + + ++ + D+I + RGGG L +N+ ++ Sbjct: 186 ECTLYPALLQGDKSVPSIIQQLSIVAEHQD-----KYDVIAIIRGGGGEVGLSSYNNYLL 240 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 RAIA +P+++ IGH T+ T+++ A A TP+ A+ + + L + Sbjct: 241 ARAIAIFPLPVLTGIGHSTNLTVSEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETI 300 Query: 293 NNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 N + + + LN + + + ++ + L ++L+ + + K+ Sbjct: 301 RNYSSLIFEQQAQKLNVFATDIRWTTQHMVEMAKNNIHILEKDLKAGFQQQVKEKFSFLE 360 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 + ++ +H +Q+ Q + + Sbjct: 361 NTEKLLQLADPVHLLQRGFSITKINGQLLTSATQ 394 Score = 83.3 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 57/152 (37%), Gaps = 5/152 (3%) Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM----LR 406 + ++ + Q +++ + Y L +++ L++ +R Sbjct: 264 SEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETIRNYSSLIFEQQAQKLNVFATDIR 323 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 T++ + +I L ++ ++K + + T ++LQ + L+RG++ + Sbjct: 324 WTTQHMVEMAKNNIHILEKDLKAGFQQQVKEKFSFLENTEKLLQLADPVHLLQRGFSITK 383 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIV 498 N +T + I DG+ ++ V Sbjct: 384 I-NGQLLTSATQVKPGDNISTRVQDGEISSTV 414 >gi|295086502|emb|CBK68025.1| Exodeoxyribonuclease VII large subunit [Bacteroides xylanisolvens XB1A] Length = 410 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 85/366 (23%), Positives = 158/366 (43%), Gaps = 28/366 (7%) Query: 24 LKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNH-----SRIDAIIWKGTLNK 75 ++ +E L ++ E+S R ++GH Y F KD ++ +IW Sbjct: 13 VRRSLEQCLPDEYWIQAELSDVRSN-TTGHCYLEFVQKDPRSNNLVAKARGMIWNNIYRL 71 Query: 76 IEFLPEE--------GIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKK 126 ++ EE GI+ LV + Y + + + P+ G + + + Sbjct: 72 LKPYFEESTGQLFTSGIKVLVKVTVQFHELYG-YSLTVLDIDPAYTLGDMARRRREILLQ 130 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPVKVQG 183 L EEG+ + + +P +P+ +AVI+S A D ++ F +FP +QG Sbjct: 131 LEEEGVLTLNKELEMPVLPQRVAVISSAIAAGYGDFCHQLQHNPSGFYFYTELFPALMQG 190 Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI 243 ++ + + A+ ++N D++++ RGGG+ DL F+ ++ A A +PI Sbjct: 191 NQVEESVLAALDRINARI-----NEFDVVVIIRGGGATSDLSGFDTYLLAAACAQFPLPI 245 Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I+ IGHE D T+ D A R TPT AAE+ + + L L RL L++ + Sbjct: 246 ITGIGHERDDTVLDSVAHTRVKTPTAAAELLIHQVTEVAEHLEELSVRLQQGAYMLLEQE 305 Query: 304 INTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L +L +PN + L+ +R+ L ++L + ++ R+ + RI Sbjct: 306 QRRLEALQIRIPNLVHRKLADARFSLLAAKKDLSQVAKALLARQSHRLELLQQRIADASP 365 Query: 363 IHNIQK 368 + + Sbjct: 366 DKLLSR 371 Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 4/138 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 LIH + + +H+ E ++Q + E++ A+ + ++ + Sbjct: 275 LLIHQVTEVAEHLEELSVRLQQGAYM---LLEQEQRRLEALQIRIPNLVHRKLADARFSL 331 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLA 480 + + + + + + + + L RGY+ + +T +L Sbjct: 332 LAAKKDLSQVAKALLARQSHRLELLQQRIADASPDKLLSRGYSITI-KDGKAVTDASSLK 390 Query: 481 TKTRILINFFDGQANAIV 498 R+ G+ ++V Sbjct: 391 PGDRLTTRLLKGEVQSVV 408 >gi|88802480|ref|ZP_01118007.1| exodeoxyribonuclease VII, large subunit [Polaribacter irgensii 23-P] gi|88781338|gb|EAR12516.1| exodeoxyribonuclease VII, large subunit [Polaribacter irgensii 23-P] Length = 457 Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats. Identities = 107/512 (20%), Positives = 195/512 (38%), Gaps = 82/512 (16%) Query: 10 LDHP-EYSVSELSYHLKHIVESNLS--HVCVRGEISGYRGIHSSGHAYFSLKDN-----H 61 + P YS+S++ +K I++ N+ + ++ EI H SGH Y L +N Sbjct: 2 SNLPSYYSLSKILNRVKTIIDDNIDGKYFWLKVEIININF-HRSGHTYIELAENINGKTV 60 Query: 62 SRIDAIIWKGTLNKIEFLP--------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSG- 112 ++ AIIW +++I + ++G E L I ++I ++ Sbjct: 61 AKCKAIIWSQNISQIREVLGQDFSNILKKGNEILCYTNIQFDTAHG-LSLLITAINLEFA 119 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCR 169 G + ++ +L +EG+ + +P + IAVI S + D ++ I Sbjct: 120 VGQIEKKRQETLDRLKKEGVIDLNKQIKVPLVISSIAVIASENTSGYEDFIKNIQNNHYN 179 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + IF VQG+ EI + +N + D I++ RGGGS DL FN Sbjct: 180 YKYNLEIFSSAVQGNGAELEILRKLKTINKQ-------KYDCIVIIRGGGSKMDLDVFNS 232 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 I + I+ + S IGHETD T+ D+AA+ TPT + Sbjct: 233 YEISKQISKMQSAVFSGIGHETDITVIDFAANQAFKTPTEVSNYI--------------- 277 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + + ++ L++ L L + H + K Sbjct: 278 ------VNKSYDFEQKILSTYALIYEKQQNLLERKFGELVLHTEGITHASNVFTRLKRGT 331 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + ++NR+ + ++N +L Q+ + +Q+ Sbjct: 332 LHTLMNRLTARISNLINEENNTLLLSNQEQL--------------------------QQS 365 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 K I +KK + + ++ H I + T++S + + S + K LK+G+ + N Sbjct: 366 KRIIDNKERIVKKQLEMLGLLVDHVINTKKTALSNSLIQIASSSPKTILKKGFAIPR-VN 424 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINK 501 N L + I + F D AI+I K Sbjct: 425 GNLYK-GEPLEKDSIIKLEFQD----AIIITK 451 >gi|213586534|ref|ZP_03368360.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 110 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 63/109 (57%), Gaps = 1/109 (0%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL 116 +++ + ++ F P+ G + LV IT + YQII ES+ P+G G L Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLL 110 >gi|262279649|ref|ZP_06057434.1| exodeoxyribonuclease VII [Acinetobacter calcoaceticus RUH2202] gi|262260000|gb|EEY78733.1| exodeoxyribonuclease VII [Acinetobacter calcoaceticus RUH2202] Length = 421 Score = 162 bits (409), Expect = 2e-37, Method: Composition-based stats. Identities = 77/397 (19%), Positives = 145/397 (36%), Gaps = 24/397 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P++S+SE ++ ++ V V+ EI GH Y L KD Sbjct: 1 MSEPQFSLSEYLGTVQEVIRLAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDADTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLSTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGGS+ DL + ND Sbjct: 178 SVCHFVYQTATFQGNTAATSLIESLGTGLRQWASTFTYPPDLIVIIRGGGSVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + S+PI IGHE D T+ D A TP+ ++ Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIIERVQEAVDSL 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + I + + LL + ++ L+ + LD++ ++ + + + Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLNSGHHLLDQMKERIQFSSQQQVKFSLA 357 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 ++ I K + + + I I + Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQ 394 Score = 77.5 bits (189), Expect = 5e-12, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 2/136 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E ++ I I + + +LH ++ ++++ H + ++ RI+F Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLNSGHHLLDQMKERIQFS 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + + + K +GY ++ I +++ I I Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PAIAIEMQ 405 Query: 491 DGQANAIVINKAPPKE 506 DG A + P +E Sbjct: 406 DGVIEANITQVIPNEE 421 >gi|227539113|ref|ZP_03969162.1| exodeoxyribonuclease VII large subunit [Sphingobacterium spiritivorum ATCC 33300] gi|227241063|gb|EEI91078.1| exodeoxyribonuclease VII large subunit [Sphingobacterium spiritivorum ATCC 33300] Length = 424 Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats. Identities = 76/377 (20%), Positives = 156/377 (41%), Gaps = 25/377 (6%) Query: 11 DHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSL---KDNH--SRI 64 + +S+ E++ ++ + ++ E++ SGH Y L KD + I Sbjct: 7 NKTIFSLLEVTKSIQKTIADRYKSMYWIKAEMNKLNHYTHSGHCYPELVEKKDGKIVAEI 66 Query: 65 DAIIWKGTLNKIEF--------LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGT 115 +I+WK N+I EGI L I+ + + I + P+ G Sbjct: 67 RSILWKADYNRINTNFMKTVREPLREGITMLFQASIS-YDPMYGLSLKIVDIDPTFSLGE 125 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS---CRFPL 172 L + ++L EEG++ P P IPK IA+I+ T + D + I + Sbjct: 126 LEKEKLESIQRLKEEGIYDLNKSLPFPVIPKRIAIISVETSKGLSDFYKIIHQNPWGYRF 185 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 ++P +QGD+ I + + ++ + D+I + RGGG L +N+ ++ Sbjct: 186 ECTLYPALLQGDKSVPSIIQQLSIVAEHQD-----KYDVIAIIRGGGGEVGLSSYNNYLL 240 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 RAIA +P+++ IGH T+ T+++ A A TP+ A+ + + L + Sbjct: 241 ARAIAIFPLPVLTGIGHSTNLTVSEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETI 300 Query: 293 NNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 N + + + LN + + + ++ + L ++L+ + + ++ Sbjct: 301 RNYSGLIFEQQAQKLNVFATDIRWTTQHMVEMAKNNIHILEKDLKAGFQQQVKEQFSFLE 360 Query: 352 HIINRIKSDFLIHNIQK 368 + ++ H +Q+ Sbjct: 361 NTEKLLQLADPEHLLQR 377 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 58/152 (38%), Gaps = 5/152 (3%) Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM----LR 406 + ++ + Q +++ + Y L +++ L++ +R Sbjct: 264 SEMVAYKNAITPSELADFLLQKFHNFAIPLDRATETIRNYSGLIFEQQAQKLNVFATDIR 323 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 T++ + +I L ++ ++K + + T ++LQ ++ L+RG++ + Sbjct: 324 WTTQHMVEMAKNNIHILEKDLKAGFQQQVKEQFSFLENTEKLLQLADPEHLLQRGFSITK 383 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIV 498 N +T + I DG+ ++ V Sbjct: 384 I-NGQLLTSTTQVKPGDNISTRVQDGEISSTV 414 >gi|193076920|gb|ABO11652.2| possible exonuclease [Acinetobacter baumannii ATCC 17978] Length = 420 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P+ S+SE ++ ++ V VR EI GH Y L KD Sbjct: 1 MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGG++ DL + ND Sbjct: 178 GVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288 + + S+PI IGHE D T+ D A TP+ E +Q ++ NL Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + ++ Y+ + L ++ L+ + L+++ ++ + + Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357 Query: 349 HFNHIINRIKSDFLIH 364 ++ I Sbjct: 358 QTESLMREILLQNPKQ 373 Score = 74.8 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 2/135 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E +++ I I + + L ++ + ++ H ++++ RI+F+ Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + R + K +GY ++ I + T + I ++ Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQI-TNSTITVDMQ 405 Query: 491 DGQANAIVINKAPPK 505 DG NA + P + Sbjct: 406 DGAINANITEVIPNE 420 >gi|184157523|ref|YP_001845862.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii ACICU] gi|332875427|ref|ZP_08443253.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6014059] gi|183209117|gb|ACC56515.1| Exonuclease VII, large subunit [Acinetobacter baumannii ACICU] gi|322507838|gb|ADX03292.1| putative exodeoxyribonuclease VII large subunit [Acinetobacter baumannii 1656-2] gi|323517438|gb|ADX91819.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii TCDC-AB0715] gi|332736363|gb|EGJ67364.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6014059] Length = 420 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P+ S+SE ++ ++ V VR EI GH Y L KD Sbjct: 1 MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGG++ DL + ND Sbjct: 178 GVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288 + + S+PI IGHE D T+ D A TP+ E +Q ++ NL Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + ++ Y+ + L ++ L+ + L+++ ++ + + Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357 Query: 349 HFNHIINRIKSDFLIH 364 ++ I Sbjct: 358 QTESLMREILLQNPKQ 373 Score = 73.3 bits (178), Expect = 9e-11, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 2/135 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E +++ I I + + L ++ + ++ H ++++ RI+F+ Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + R + K +GY ++ I + + + I ++ Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405 Query: 491 DGQANAIVINKAPPK 505 DG NA + P + Sbjct: 406 DGAINANITEVIPNE 420 >gi|110667980|ref|YP_657791.1| exodeoxyribonuclease VII large subunit [Haloquadratum walsbyi DSM 16790] gi|109625727|emb|CAJ52160.1| exodeoxyribonuclease VII large subunit [Haloquadratum walsbyi DSM 16790] Length = 392 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 95/357 (26%), Positives = 158/357 (44%), Gaps = 19/357 (5%) Query: 17 VSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLN 74 V++++ + +VE + H + G+IS Y I S+GH +F L S + +I++ ++ Sbjct: 31 VNDINTQIGDLVEGSPAIEHEYILGDISDY-SISSNGHGHFDLVHEDSSLHCVIFRSRVD 89 Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 K++ E+GI V G I+ + I++ +I G G ++ K+ L E G Sbjct: 90 KLQNDIEQGILAAVSGDISYYESEGSVSILVRDIIAVGQGIYQQTYQENKQTLAESGYLD 149 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANA 193 + K +P++PK I + TS +D + I ++P + + + VQG++ + +A Sbjct: 150 ESAKQSLPYLPKHIGIATSGDSDARQDAVTSIHDQYPDINITVQDTSVQGNDALVSLMDA 209 Query: 194 ILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDW 253 I L R +IIL RGGG+ + L FN+ + R I ++ PI+ +GHETD Sbjct: 210 ISSL------DDNARIKLIILTRGGGAEKHLRVFNEIPLCRVIHETTTPIVVGVGHETDR 263 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TLA AD R TPT + P K+ LQ L L A LN+ +K I + L + Sbjct: 264 TLAGAVADTRVMTPTEVGKTV-PEKDRLQEELERLSADLNHAYTNTVKQAIEQKHDRLNS 322 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + R D L K + + IQ+ R Sbjct: 323 --------AYDRQVTDELRSVSNRLNTAYETVKQQKAHERERAKMIKPYERTIQRQR 371 >gi|239503693|ref|ZP_04663003.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii AB900] Length = 420 Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P+ S+SE ++ ++ V VR EI GH Y L KD Sbjct: 1 MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGG++ DL + ND Sbjct: 178 GVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288 + + S+PI IGHE D T+ D A TP+ E +Q ++ NL Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + ++ Y+ + L ++ L+ + L+++ ++ + + Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357 Query: 349 HFNHIINRIKSDFLIH 364 ++ I Sbjct: 358 QTESLMREILLQNPKQ 373 Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 51/135 (37%), Gaps = 2/135 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E +++ I I + + L ++ + ++ H ++++ RI+F+ Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + R + K +GY ++ I + + + I ++ Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405 Query: 491 DGQANAIVINKAPPK 505 DG A + P + Sbjct: 406 DGAIKANITEVIPNE 420 >gi|299770882|ref|YP_003732908.1| exodeoxyribonuclease VII large subunit [Acinetobacter sp. DR1] gi|298700970|gb|ADI91535.1| exodeoxyribonuclease VII large subunit [Acinetobacter sp. DR1] Length = 421 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 80/424 (18%), Positives = 157/424 (37%), Gaps = 24/424 (5%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P++S+SE ++ ++ V V+ EI GH Y L KD Sbjct: 1 MSEPQFSLSEYLGTVQEVIRLAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDAKTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ANCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGGS+ DL + ND Sbjct: 178 GVCHFVYHTATFQGNTAATSLIESLGSGLRQWASTFKFPPDLIVIIRGGGSVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + ++PI IGHE D T+ D A TP+ ++ Sbjct: 238 YELAALLCKRTVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSL 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + I + + LL + +S Q L+ + LD++ ++ + + + Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHQIKSSAQGQLNSAHRLLDQMKERIQFSSQQQVKFSLT 357 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 ++ + K + + + I I + I +E ++ + ++ + Sbjct: 358 QIESLMKEVLLQNPKQVQAKGYAIVRSEGKAIRSIHQISNPAIAIEMQDGVIEANITQVI 417 Query: 409 TKNR 412 + Sbjct: 418 PNEQ 421 Score = 77.1 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 50/136 (36%), Gaps = 2/136 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E ++ I I + + +LH ++ + ++ H + ++ RI+F Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHQIKSSAQGQLNSAHRLLDQMKERIQFS 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K T + + + K +GY ++ I ++ I I Sbjct: 348 SQQQVKFSLTQIESLMKEVLLQNPKQVQAKGYAIVRSE-GKAIRSIHQIS-NPAIAIEMQ 405 Query: 491 DGQANAIVINKAPPKE 506 DG A + P ++ Sbjct: 406 DGVIEANITQVIPNEQ 421 >gi|293608633|ref|ZP_06690936.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829206|gb|EFF87568.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 421 Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats. Identities = 81/397 (20%), Positives = 148/397 (37%), Gaps = 24/397 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P++S+SE ++ ++ V V+ EI GH Y L KD Sbjct: 1 MSEPQFSLSEYLGTVQEVIRVAFDEPVWVKAEIRNLNIK--GGHYYLELAEKDAETDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIEISSDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIIERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGGS+ DL + ND Sbjct: 178 GVCHFVYHTATFQGNTAATSLIESLGSGLRQWASTFNFPPDLIVIIRGGGSVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + S+PI IGHE D T+ D A TP+ ++ Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSL 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYR 348 + + I + + LL + +S Q+ S +R LD++ ++ + + + Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLSSAHRLLDQMKERIQFSSQQQVKFSLA 357 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 ++ I K + + + I I + Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQ 394 Score = 72.5 bits (176), Expect = 1e-10, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 51/136 (37%), Gaps = 2/136 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E ++ I I + + +LH ++ ++++ H + ++ RI+F Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHHIKSSAQSQLSSAHRLLDQMKERIQFS 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + + + K +GY ++ I +++ I I Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PAIAIEMQ 405 Query: 491 DGQANAIVINKAPPKE 506 DG A + P +E Sbjct: 406 DGVVEANITQVIPHEE 421 >gi|223557985|gb|ACM90991.1| exodeoxyribonuclease VII large subunit [uncultured bacterium URE4] Length = 395 Score = 161 bits (406), Expect = 4e-37, Method: Composition-based stats. Identities = 83/355 (23%), Positives = 153/355 (43%), Gaps = 28/355 (7%) Query: 15 YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNH-----SRIDAII 68 + EL LK VE V+ EI + ++GH Y +L + + I A+I Sbjct: 6 LELKELLARLKEGVEDAFPDRYWVKAEIGSWSPR-ANGHCYLNLTQSDRGKPVADIRAMI 64 Query: 69 WKGTLNKIE--------FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119 WK +++ + GI LV +++ + I+ + P+ G A Sbjct: 65 WKWVFPQLKAFFEQETGQTLQAGITVLVRVQVSFSEMFG-ISLFIDDIDPAFTVGEQALA 123 Query: 120 LEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVII 176 +K +KL G Q + +P +P +AVITS T A D + + + R+ + Sbjct: 124 KKKAIEKLTAGGYLEMQQELALPRLPYRLAVITSKTAAGYGDFRRHLLENEAGYAFRLDL 183 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 + +QG++ P I +A+ + D +++ RGGGS DL F+D + AI Sbjct: 184 YEALMQGEQAPASIISALAEAQEQP-------CDAVLILRGGGSEMDLACFDDYDLAVAI 236 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 A P+++AIGH+ D+ +AD A+ TPT A++ + + L +L+ R+ + Sbjct: 237 ATCPAPVVTAIGHDRDFHIADLVANRSVKTPTALADLFLDAYAAEDALLDDLQMRVRRAV 296 Query: 297 IRLIKYKINTLNSLLKALPNSD-QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 + + ++SL++ L + + +R LD ++ + I Sbjct: 297 ADRVNGMVRKVDSLVQRLRFAAGARIDRARAALDLKEALIQASDPRKILSMGYAL 351 Score = 95.2 bits (235), Expect = 2e-17, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 39/108 (36%) Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + +R +R+ + + L+ R+ F +I ++ + ++Q+ + L Sbjct: 288 LQMRVRRAVADRVNGMVRKVDSLVQRLRFAAGARIDRARAALDLKEALIQASDPRKILSM 347 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQP 508 GY + + + +A RI + F DG A V Sbjct: 348 GYALVTGGDGKVLKSVVPVAAGDRIGVRFADGSIRATVDAVDFSASSK 395 >gi|307298695|ref|ZP_07578498.1| Exonuclease VII, large subunit-like protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306915860|gb|EFN46244.1| Exonuclease VII, large subunit-like protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 513 Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats. Identities = 85/438 (19%), Positives = 167/438 (38%), Gaps = 34/438 (7%) Query: 83 GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIP 142 G ++L G ++ + + + I I+++ P G + + L + + Sbjct: 93 GKKWLFEGTLSFYKPRASFSIWIDTIAPIGESDIAARRREIYLALKARNALRTEEHDLAE 152 Query: 143 FIP-KIIAVITSPTGAVIRDILQRISCRFPLR--VIIFPVKVQGDECPKEIANAILQLNT 199 P K IAVI+S T A + D +S ++P + V +F +QG+ I +A+ ++ Sbjct: 153 LPPIKRIAVISSSTAAGLGDFFSNLSLQYPYKPIVHLFESYMQGNRTVPGILSALRKI-- 210 Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS---IPIISAIGHETDWTLA 256 + D+++L RGGGS DL +F++ + AI++ + P++SAIGHE D+T+ Sbjct: 211 ---ASCPVKYDVVVLTRGGGSASDLMYFDNLDLGSAISDFNKTYCPVLSAIGHERDFTIP 267 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D+ A R TPT A +SL L++ + L + + + Sbjct: 268 DFVAWKRFDTPTAVARGITEQVNEYVASLEEFANHLDDEMNWLFQRACDETDP-----KR 322 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH---NIQKNRQHI 373 L ++R E + ++ +N + S +I++ I Sbjct: 323 LGIMLDRIEDNMNRTEHFFEDEIRVLSGTILHRIGQAVNELGSFNPTRYVLSIERTMNEI 382 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 L + + + ++ F + ++ LR Q + + ++ L I + Sbjct: 383 LAVTEGLINRAETTIQRSFHYSESQLDYAG-LRNQLDRHLMNANGQVELLDKGILRLFDD 441 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYT-------SIQDTNNNFITQKRNLATKTRIL 486 KI + L TL GY + + + R ++ + Sbjct: 442 KINEAGNDLDDLFNDL-------TLHGGYAASLLFGGVVLKKADRIVNSVRIISPGDEVD 494 Query: 487 INFFDGQANAIVINKAPP 504 F DG+A A + Sbjct: 495 CIFKDGEAKATIDEVKSE 512 >gi|169633858|ref|YP_001707594.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii SDF] gi|169152650|emb|CAP01647.1| putative exodeoxyribonuclease VII large subunit (Exonuclease VII large subunit) [Acinetobacter baumannii] Length = 420 Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats. Identities = 77/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P+ S+SE ++ ++ V VR EI GH Y L KD Sbjct: 1 MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGG++ DL + ND Sbjct: 178 RVCHFVYQSATFQGNTAAASLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288 + + S+PI IGHE D T+ D A TP+ E +Q ++ NL Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + ++ Y+ + L ++ L+ + L+++ ++ + + Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357 Query: 349 HFNHIINRIKSDFLIH 364 ++ I Sbjct: 358 QTESLMREILLQNPKQ 373 Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 2/135 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E +++ I I + + L ++ + ++ H ++++ RI+F+ Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + R + K +GY ++ I + + + I ++ Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405 Query: 491 DGQANAIVINKAPPK 505 DG NA + P + Sbjct: 406 DGAINANITEVIPNE 420 >gi|169796568|ref|YP_001714361.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii AYE] gi|213156319|ref|YP_002318739.1| exodeoxyribonuclease VII [Acinetobacter baumannii AB0057] gi|215484028|ref|YP_002326253.1| Exodeoxyribonuclease 7 large subunit [Acinetobacter baumannii AB307-0294] gi|301348136|ref|ZP_07228877.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii AB056] gi|301513381|ref|ZP_07238618.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii AB058] gi|301595142|ref|ZP_07240150.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii AB059] gi|332854623|ref|ZP_08435445.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013150] gi|332867715|ref|ZP_08437804.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013113] gi|169149495|emb|CAM87383.1| putative exodeoxyribonuclease VII large subunit (Exonuclease VII large subunit) [Acinetobacter baumannii AYE] gi|213055479|gb|ACJ40381.1| exodeoxyribonuclease VII [Acinetobacter baumannii AB0057] gi|213987645|gb|ACJ57944.1| Exodeoxyribonuclease 7 large subunit [Acinetobacter baumannii AB307-0294] gi|332727907|gb|EGJ59306.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013150] gi|332733799|gb|EGJ64950.1| Exonuclease VII, large subunit [Acinetobacter baumannii 6013113] Length = 420 Score = 160 bits (405), Expect = 5e-37, Method: Composition-based stats. Identities = 76/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P+ S+SE ++ ++ V VR EI GH Y L KD Sbjct: 1 MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGG++ DL + ND Sbjct: 178 KVCHFVYQNATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288 + + S+PI IGHE D T+ D A TP+ E +Q ++ +L Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDSL 297 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + ++ Y+ + L ++ L+ + L+++ ++ + + Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357 Query: 349 HFNHIINRIKSDFLIH 364 ++ I Sbjct: 358 QTESLMREILLQNPKQ 373 Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 51/135 (37%), Gaps = 2/135 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E ++ I I + + L ++ + ++ H ++++ RI+F+ Sbjct: 288 ERVQEAVDSLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + R + K +GY ++ I + + + I ++ Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405 Query: 491 DGQANAIVINKAPPK 505 DG NA + P + Sbjct: 406 DGAINANITEVIPNE 420 >gi|260550020|ref|ZP_05824235.1| exodeoxyribonuclease VII [Acinetobacter sp. RUH2624] gi|260407012|gb|EEX00490.1| exodeoxyribonuclease VII [Acinetobacter sp. RUH2624] Length = 421 Score = 160 bits (404), Expect = 7e-37, Method: Composition-based stats. Identities = 79/397 (19%), Positives = 146/397 (36%), Gaps = 24/397 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P++S+SE ++ ++ V VR EI GH Y L KD Sbjct: 1 MSDPQFSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNIK--GGHYYLELAEKDVDTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + +K ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSASKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + VI A + D + Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIANVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ R PD+I++ RGGG++ DL + ND Sbjct: 178 KVCHFVYQSATFQGNTAAVSLMESLATGLKQWANRYNFPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + S+PI IGHE D T+ D A TP+ ++ Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVEHVQEAVDSL 297 Query: 290 ARLNNIIIRLIKYKINTLNSLLKAL-PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + I + + LL + ++ L+ + LD++ ++ + + + Sbjct: 298 QTIKLLSQHQITTYQSKNDQLLHHINSSAQNQLNSAHRLLDQMKERIQFSSQQQVKFSLA 357 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 ++ I K + + + I I + Sbjct: 358 QIESLMKEILLQNPKQVQAKGYAIVRSEGKAIRSIHQ 394 Score = 78.3 bits (191), Expect = 3e-12, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 2/136 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 +H+ E ++ I I + + +LH + +N++ H + ++ RI+F Sbjct: 288 EHVQEAVDSLQTIKLLSQHQITTYQSKNDQLLHHINSSAQNQLNSAHRLLDQMKERIQFS 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + + + K +GY ++ I +++ I I Sbjct: 348 SQQQVKFSLAQIESLMKEILLQNPKQVQAKGYAIVRSE-GKAIRSIHQISS-PSIAIEMQ 405 Query: 491 DGQANAIVINKAPPKE 506 DG A + P +E Sbjct: 406 DGVVEANITQVIPNEE 421 >gi|260558032|ref|ZP_05830244.1| exodeoxyribonuclease VII, large subunit [Acinetobacter baumannii ATCC 19606] gi|260408542|gb|EEX01848.1| exodeoxyribonuclease VII, large subunit [Acinetobacter baumannii ATCC 19606] Length = 420 Score = 159 bits (403), Expect = 8e-37, Method: Composition-based stats. Identities = 78/376 (20%), Positives = 141/376 (37%), Gaps = 24/376 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSL--KDNH----- 61 + P+ S+SE ++ ++ V VR EI GH Y L KD Sbjct: 1 MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVK--GGHYYLELAEKDADTDKVI 58 Query: 62 SRIDAIIWKGTLNK--IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG- 112 + A IWK + NK ++F E GIE L+ + F + + IE + S Sbjct: 59 ASCKATIWKFSANKIVLKFERETGIELASDLNVLIKIRAR-FDPQYGFSVNIEEIDSSFT 117 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L +EGL P PF + + VI A + D + Sbjct: 118 LGEIAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERN 177 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + QG+ + ++ PD+I++ RGGG++ DL + ND Sbjct: 178 RVCHFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLND 237 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK-EHLQSSLINL 288 + + S+PI IGHE D T+ D A TP+ E +Q ++ NL Sbjct: 238 YELAALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNL 297 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + ++ Y+ + L ++ L+ + L+++ ++ + + Sbjct: 298 QTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLS 357 Query: 349 HFNHIINRIKSDFLIH 364 ++ I Sbjct: 358 QTESLMREILLQNPKQ 373 Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 2/135 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E +++ I I + + L ++ + ++ H ++++ RI+F+ Sbjct: 288 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 347 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + R + K +GY ++ I + + + I ++ Sbjct: 348 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQITS-STITVDMQ 405 Query: 491 DGQANAIVINKAPPK 505 DG NA + P + Sbjct: 406 DGAINANITEVIPNE 420 >gi|226323207|ref|ZP_03798725.1| hypothetical protein COPCOM_00979 [Coprococcus comes ATCC 27758] gi|225208397|gb|EEG90751.1| hypothetical protein COPCOM_00979 [Coprococcus comes ATCC 27758] Length = 179 Score = 159 bits (402), Expect = 1e-36, Method: Composition-based stats. Identities = 38/156 (24%), Positives = 78/156 (50%), Gaps = 3/156 (1%) Query: 12 HPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 Y+V +++ ++K++ + + + ++GE+S + H+SGH YFSLKD I +++ Sbjct: 2 RNVYTVKQVNAYIKNMFTQDFMLNRIYIKGEVSNCK-YHTSGHLYFSLKDESGTIACVMF 60 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G + + F +EG + +V+G ++ + +YQ+ + ++ G+G L K KK+L E Sbjct: 61 AGQRSGLSFRMQEGQQVIVLGSVSVYERDGRYQVYAKEIVLDGAGLLYEKFIKLKKELEE 120 Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 G+F+ ++K I + Q Sbjct: 121 MGMFAPEYKKADSEICADSWCCNGTNRSGSARYYQH 156 >gi|262375268|ref|ZP_06068501.1| exodeoxyribonuclease VII, large subunit [Acinetobacter lwoffii SH145] gi|262309522|gb|EEY90652.1| exodeoxyribonuclease VII, large subunit [Acinetobacter lwoffii SH145] Length = 423 Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats. Identities = 79/399 (19%), Positives = 141/399 (35%), Gaps = 24/399 (6%) Query: 10 LDHPEYSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHS------ 62 D P+ S+ E ++ +V+ V V+ EI GH Y L + + Sbjct: 2 TDDPQLSLKEYLATVQEVVKLTFDTPVWVKAEIRNLSIKA--GHYYLELAEKEADSDQVI 59 Query: 63 -RIDAIIWKGTLNKI--EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIP-SG 112 A IWK + KI +F E G ++ L+ K F + + I + Sbjct: 60 ASCRATIWKFSAQKIVTQFERESGIELSRDLKVLIKVKAN-FDPQYGFSLNIVEIDSGYT 118 Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCR 169 G + ++ ++L EGL P PF I VI A + D + Sbjct: 119 LGDIARRYQQIVERLTTEGLIQRNRNLPSPFDLNRILVIAPENAAGLGDFKKDADALQRA 178 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 I + QG+ P+ I + Q PD+I++ RGGG++ DL + ND Sbjct: 179 QVCEFIYYSATFQGNTAPQSIMQNLAQALKQWAQTYNTAPDLIVIIRGGGAVNDLAYLND 238 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLINL 288 + + S+P+ IGHE D T+ D A TP+ E Q L L Sbjct: 239 YDLAALLCKRSVPVWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIFELTQDVLNYL 298 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + ++ Y+ L ++ + + RL ++ + + Sbjct: 299 QRIQRLSQQQIQAYQNQNDQFLKLIQSLANNQIMDALQRLQQIKANTASLAQQHTLLINQ 358 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + ++ H + K + +++ + I + Sbjct: 359 QLDALMRETLLQNPKHVLSKGYAIVRQQEHMVASIQQIQ 397 Score = 67.1 bits (162), Expect = 7e-09, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 54/153 (35%), Gaps = 5/153 (3%) Query: 355 NRIKSDFLIHNIQKNRQHILEKQQ----HIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 D I R HI E Q ++++I + + I + + L +++ Sbjct: 269 AHRSFDTPSKVIAGIRNHIFELTQDVLNYLQRIQRLSQQQIQAYQNQNDQFLKLIQSLAN 328 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 N+I ++++ + + + R K+ L +GY ++ Sbjct: 329 NQIMDALQRLQQIKANTASLAQQHTLLINQQLDALMRETLLQNPKHVLSKGYAIVR-QQE 387 Query: 471 NFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + + + + + DG +A +I P Sbjct: 388 HMVASIQQIQSSDLVEVELHDGIFSAQLIQVLP 420 >gi|310831037|ref|YP_003969680.1| putative exodeoxyribonuclease VII large subunit [Cafeteria roenbergensis virus BV-PW1] gi|309386221|gb|ADO67081.1| putative exodeoxyribonuclease VII large subunit [Cafeteria roenbergensis virus BV-PW1] Length = 449 Score = 157 bits (398), Expect = 3e-36, Method: Composition-based stats. Identities = 106/427 (24%), Positives = 188/427 (44%), Gaps = 23/427 (5%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 +S+L+ + + + V E+ G GH YF K+N++++ +I++ T Sbjct: 5 ISQLNKEIIKYLPT--KKYIVESEVIGVSNRR--GHTYFDFKENNNKLGGLIFRNT---- 56 Query: 77 EFLPEEGIEFLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKRKKKLLEEGLFSD 135 + E+G + GK++ + K ++ + SG G + K+KL +EGLF+ Sbjct: 57 -EILEDGDKIKCAGKLSYYAPYGKLSFQVDKIISKSGLGAIYKDFLIVKEKLTKEGLFNK 115 Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAI 194 HK + + + +ITS GA I+DI + +S ++V I V VQG CP E++N + Sbjct: 116 IHKKKLNGLIEKAIIITSKDGAAIQDIYRNLSNHNSKIKVKIKDVPVQGVNCPIEVSNLL 175 Query: 195 LQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT 254 +LN +II+ RGGG +DL FN E+IVR+I N++ IISAIGHETD Sbjct: 176 NKLNKHHNM-------LIIITRGGGDYQDLNGFNQEIIVRSIFNNNNIIISAIGHETDTV 228 Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D +D PTP+ A+ + L + N+ L I I+ K + L K + Sbjct: 229 LTDLVSDYNLPTPSLVAQFLIDYNNELLNEWNNMILNLEKNINLEIQNKYDMLRDFEKNI 288 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + L +++ ++ + ++ + N++ I K I Sbjct: 289 LEEENKLDLLINKIENDIKKDIQSKYDMLRDFDKIILEEENKLDLW-----INKIENEIK 343 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 E Q+ I++ + I E+ + + + K I+ + + + K Sbjct: 344 EDIQNRYDILRDFDKTILQEENKLDLWISKIENDIKEEIYKCDKELDDYYNYLSSVGEIK 403 Query: 435 IKSCHTS 441 I + Sbjct: 404 ILNRKEE 410 >gi|75763304|ref|ZP_00743050.1| Exodeoxyribonuclease VII large subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74489204|gb|EAO52674.1| Exodeoxyribonuclease VII large subunit [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 260 Score = 157 bits (397), Expect = 4e-36, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 122/299 (40%), Gaps = 49/299 (16%) Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265 D++I+ RGGGSIE+LW FN+EM+ RAI S IPIISA+GHETD+T+AD+ ADLRAP Sbjct: 1 MGEIDVLIVGRGGGSIEELWAFNEEMVARAIFKSEIPIISAVGHETDFTIADFVADLRAP 60 Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSC 323 TPT AAE+A P LQ ++ RL + L+ K L L K+ Q Sbjct: 61 TPTAAAELAAPNIIELQEKVLQRTLRLQRAMRELVHKKDEKLQVLQKSYAFRYPRQVYEQ 120 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 +LDR +L E I +K + ++ I + + + Q+ +++ Sbjct: 121 KEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQKIMQTKVAVETLQKQLQRE 180 Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + +++ + Sbjct: 181 M-----------------------------------------------QTLLQTKEFAFV 193 Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + L++ + + RGY + D + ++++ + + DG + V Sbjct: 194 RAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDAVSVQLQDGILDCSVSGIE 252 >gi|213161728|ref|ZP_03347438.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 107 Score = 157 bits (397), Expect = 4e-36, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 1/106 (0%) Query: 8 NSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +S ++VS L+ ++ ++E + V + GEIS + +SGH YF+LKD+ +++ Sbjct: 3 SSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFT-QPASGHWYFTLKDDTAQVRCA 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 +++ + ++ F P+ G + LV IT + YQII ES+ P+G Sbjct: 62 MFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGE 107 >gi|149276524|ref|ZP_01882668.1| exodeoxyribonuclease VII, large subunit [Pedobacter sp. BAL39] gi|149233044|gb|EDM38419.1| exodeoxyribonuclease VII, large subunit [Pedobacter sp. BAL39] Length = 431 Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats. Identities = 85/500 (17%), Positives = 174/500 (34%), Gaps = 102/500 (20%) Query: 34 HVCVRGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAIIWKGTLNKIE-FLPEEGIE 85 V +IS Y S + YF L KD+ +RI W I F G + Sbjct: 2 SFWVIADISNYTYKVQSNYHYFELIEKDSGSSRVVARIAGRAWGNASLHIRNFEKTTGQQ 61 Query: 86 ----FLVIGKITT-FPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEG-------- 131 V+ +++ + S Q+ + + S G ++ ++L+ E Sbjct: 62 FKNDINVLVQVSVQYNPSFGLQLNLLDIDTSFTLGKFEQQRKETLERLVRENGDFIQRNG 121 Query: 132 --LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRVIIFPVKVQGDEC 186 F+ + + IAV++S T A +D + + V + VQG+ Sbjct: 122 EQYFTRNKGLRFNRVLQRIAVLSSDTSAGFQDFKHTLEHNPFGYHFDVDDYFTLVQGEGN 181 Query: 187 PKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISA 246 ++ + ++ + + + D +++ RGGG+ D F++ + RAIA IPII+ Sbjct: 182 ARQFLSRLIAVFE-----SQKKYDALVIIRGGGAQSDFVMFDNYELNRAIAKFPIPIITG 236 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGH+ + T+AD A TPT AAE+ I ++ Sbjct: 237 IGHQKNETIADLMAHTSTKTPTKAAELL---------------------IAHNRHFEEQL 275 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 LN L + Q ++ + RL +L + + + ++ +R + N + I Sbjct: 276 LNMQQTVLIRTFQMINLQKDRLGQLNQLTINTSKNLLHEHHRLLMNRSNML--------I 327 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 R + KQ+ + +V Sbjct: 328 SNPRVLMANKQKDLGNLVIN---------------------------------------- 347 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRIL 486 ++ ++ +++ +++ + KN L +G+ + + + + T + Sbjct: 348 MKTYSRMYFQNKQANIAHFESLVKMMSPKNILNKGFALLMR-DGKITSDASAIEPGTELT 406 Query: 487 INFFDGQANAIVINKAPPKE 506 ++ V +K+ Sbjct: 407 VHLASAILKTTVKSKSTNDG 426 >gi|261416719|ref|YP_003250402.1| exodeoxyribonuclease VII, large subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373175|gb|ACX75920.1| exodeoxyribonuclease VII, large subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|302328054|gb|ADL27255.1| exodeoxyribonuclease VII, large subunit [Fibrobacter succinogenes subsp. succinogenes S85] Length = 432 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 83/366 (22%), Positives = 140/366 (38%), Gaps = 28/366 (7%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD-------NHSRI--- 64 YSV++ LK+ VE+ V V G IS SG Y S+ D + + Sbjct: 8 YSVTQYMRSLKNTVEAT-PAVWVHGVISQIAEK-KSG-VYLSIADFADGDVKPKATLALY 64 Query: 65 ------DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 DAI+ K + F + ++ + + + K Q I + P G L Sbjct: 65 CYTAKYDAILAKISSLSQPFTLKHDLKVNFLVRAELYIPYGKLQAQILDIDPVYTIGELA 124 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR-FPLRVII 176 K+L EGL + + +P + +IT A +D R+ F V Sbjct: 125 LTKSAILKRLAMEGLLEKNKQLELADVPLRVGLITGENTAAYKDFTTRLEASPFAFEVTT 184 Query: 177 FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI 236 ++QG+E I A+ QL ++ D++ + RGGG+ DL F+ E + RA+ Sbjct: 185 IYARMQGNETEDSIIAALEQL------QSDSNLDVVCIVRGGGAKTDLNFFDSEALCRAV 238 Query: 237 ANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNII 296 AN P+ + IGHE D L D A L TPT A+ V + + A + + Sbjct: 239 ANYPTPVFTGIGHEIDRCLLDEVAYLSCITPTDCAKRLVERVTDSWNRMTEAMASIADGA 298 Query: 297 IRLIKYKINTLNSLLKALPNS-DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 L+ L ++ L + + + + ++ + I ++ N Sbjct: 299 RDLLTENNKQLGTMGNQLQQKVFGLIQNEKSKHVLIAASIKKDTAFYIKSEHERLNRNQE 358 Query: 356 RIKSDF 361 +K Sbjct: 359 GLKQGS 364 >gi|307565316|ref|ZP_07627809.1| exonuclease VII, large subunit [Prevotella amnii CRIS 21A-A] gi|307345985|gb|EFN91329.1| exonuclease VII, large subunit [Prevotella amnii CRIS 21A-A] Length = 439 Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats. Identities = 83/398 (20%), Positives = 166/398 (41%), Gaps = 30/398 (7%) Query: 11 DHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAY--FSLKDNHS---RI 64 + S+ +L+ + ++ L + + E+S S GH Y F K+ S Sbjct: 4 NKKALSLKDLNELVAEVIHLQLHNTYWLEAELSQVNE--SRGHCYMEFIQKEETSNNIVA 61 Query: 65 DAI--IWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIIIESLIPS-GS 113 A W I+ E G++ +V F + IIE + P Sbjct: 62 RAAGRCWANKWLNIKAYFERITGQNIHAGMKIMVQVSAQ-FHVQYGFSWIIEDINPEYTL 120 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI---SCRF 170 G ++ + +L EG+F Q + + IAVI+S T A D ++ F Sbjct: 121 GDIMRRRNEIIAQLRAEGVFDLQKELYLSTFASRIAVISSITAAGYGDFCNQLLNNDYGF 180 Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 + +F +QG+ +I + +N ++ D +++ RGGG+ DL F+ Sbjct: 181 SFHIELFQSAMQGERVEHDIIACLNDINDRQDE-----FDCVVIIRGGGATADLSSFDTL 235 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 + IAN +PII+ IGHE D ++ D + L+ TPT AA + S ++ E Sbjct: 236 FLAENIANFPLPIITGIGHERDESVIDLVSFLKVKTPTAAAAFLIDRLNVTFSRILKAEE 295 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRH 349 ++ + +KY+ +N+L +P + + + L+ L +++ + + I+ + Sbjct: 296 SIHKNVYDRLKYEHTRINNLANRVPLLFSLVKTQQEKHLNMLLQKMINLMLTYIYGEQNK 355 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + + + S+ H + ++ +I +Q ++ + + Sbjct: 356 IDAYYSSLLSNV-QHFLLNSKYNIELIEQRLKSVDPKR 392 Score = 80.6 bits (197), Expect = 7e-13, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 5/135 (3%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR----IFYLHTHIKKLITRI 427 + + I + + L K ++ L+ML ++ N I+ I + + Sbjct: 304 RLKYEHTRINNLANRVPLLFSLVKTQQEKHLNMLLQKMINLMLTYIYGEQNKIDAYYSSL 363 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + H + + ++ + + L+S K L+RGY+ N IT + + Sbjct: 364 LSNVQHFLLNSKYNIELIEQRLKSVDPKRLLQRGYSITL-CNGRLITNINQIKEDDVLTT 422 Query: 488 NFFDGQANAIVINKA 502 F G+ +IV K Sbjct: 423 TLFHGKVKSIVKKKT 437 >gi|257453840|ref|ZP_05619118.1| exodeoxyribonuclease 7 large subunit [Enhydrobacter aerosaccus SK60] gi|257448767|gb|EEV23732.1| exodeoxyribonuclease 7 large subunit [Enhydrobacter aerosaccus SK60] Length = 505 Score = 154 bits (390), Expect = 3e-35, Method: Composition-based stats. Identities = 76/382 (19%), Positives = 141/382 (36%), Gaps = 24/382 (6%) Query: 7 KNSLDHPEYSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH---- 61 + +L S+S+ ++ ++ +H V V+ EI GH YF L D Sbjct: 75 QQALSDTVLSLSDYLSAVQLVISETFAHTVWVKAEIRSLSAK--GGHYYFELADKDMDGK 132 Query: 62 --SRIDAIIWKGTLNKI--EFL------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 + +W+G KI +F E G+ L+ T F + + I + P+ Sbjct: 133 VTASCRGTLWRGQAAKILAKFEKNTGMSLERGLNVLLKVSAT-FHAQYGFSLNIVDIDPT 191 Query: 112 -GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRF 170 G L + +L EEGL P+PF + + VI A + D Sbjct: 192 YTLGDLAKQYQMILTRLHEEGLLDLNQSLPMPFDIEHVLVIAPEKAAGLGDFRADADRLA 251 Query: 171 PLRVIIFP---VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHF 227 IF QG+ P++I A+++ + D+I++ RGGG++ DL + Sbjct: 252 STGACIFHYEHATFQGNHAPEDIRQALIKGMK-NLSKQHITADLIVIIRGGGAVGDLAYL 310 Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPV-KEHLQSSLI 286 ND + +A IP+ IGHE D + D A TP+ Q++ Sbjct: 311 NDYELAALVAEQPIPVWVGIGHERDRVMLDEVAHQSFDTPSKVIAGIRNHLLTITQAAKQ 370 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + +++ + ++ L K + + LS ++ +D ++ I Sbjct: 371 HFLTIEQIAKSSILQARRDSEQQLTKIQSAAQRQLSAAKLAMDNQFVQIRQLAYQQITTA 430 Query: 347 YRHFNHIINRIKSDFLIHNIQK 368 + + + + + Sbjct: 431 RQSTDRLREMTLLQHPSTVLTR 452 Score = 74.8 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 61/197 (30%), Gaps = 13/197 (6%) Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE---- 375 L+ + + + I R + + ++ D I R H+L Sbjct: 309 YLNDYELAALVAEQPIPVWVGIGHERDRVMLDEVAHQ-SFDTPSKVIAGIRNHLLTITQA 367 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +QH I + I +++ L ++ + ++ + +I + +I Sbjct: 368 AKQHFLTIEQIAKSSILQARRDSEQQLTKIQSAAQRQLSAAKLAMDNQFVQIRQLAYQQI 427 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQ--------DTNNNFITQKRNLATKTRILI 487 + S + L RGY I+ +N +T + + I I Sbjct: 428 TTARQSTDRLREMTLLQHPSTVLTRGYAIIRTSHPASKDSASNTVMTSIAQVEPNSTITI 487 Query: 488 NFFDGQANAIVINKAPP 504 DG A V K P Sbjct: 488 ELQDGYLQATVNAKHPK 504 >gi|154250244|ref|YP_001411069.1| exodeoxyribonuclease VII [Fervidobacterium nodosum Rt17-B1] gi|154154180|gb|ABS61412.1| Exodeoxyribonuclease VII [Fervidobacterium nodosum Rt17-B1] Length = 495 Score = 152 bits (384), Expect = 1e-34, Method: Composition-based stats. Identities = 106/509 (20%), Positives = 202/509 (39%), Gaps = 55/509 (10%) Query: 16 SVSELSYHLK------HIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDN-----HSRI 64 ++ E +++ +++ V ++ + +G Y ++ + + Sbjct: 18 TLREFVEYIELRLRETDLLKLRFKFV---ADV--VKVKPYNGSLYITVSQETVDGKKTEL 72 Query: 65 DAIIWKG----TLNKIEFLPE---EGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 I+WK LN + E E ++ GK++ +P +++ +S+ P G +L Sbjct: 73 TIILWKNLTKIVLNSLGLKSEYELEHKKWEFQGKLSFYPDRAQFSFWADSIAPQGESDIL 132 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKI-IAVITSPTGAVIRDILQRISCRFPLR--V 174 +K K+ L +E L + N P IAVITS T D L I LR + Sbjct: 133 QRRQKIKELLKKERLLMEVLHNLDELEPIKYIAVITSKTAQGYFDFLSNILVPDELRPVI 192 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 ++ +QG +E+ +A+ ++ T + D+I++ RGGG DL +F+D + R Sbjct: 193 HLYESSMQGATTAEEVISALNRIETFCREF-MVKYDVIVIIRGGGGPSDLMYFDDYNLAR 251 Query: 235 AIANSS--IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 IA + IP+++ IGHE D T+ D+ A R PTPT A+ + + + ++ Sbjct: 252 RIAQMNNFIPVLTGIGHEKDETIPDFVAWRRFPTPTAVAKEIS-------NQIKGYQDKV 304 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 + L +Y N + L L +++ +R E E + K Sbjct: 305 ERNVSDLSRYMENAIELLNAKLSDTNYKTVKEIFRGKIQSVEEELIDSAEVLYKRFSLKE 364 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 I DF+ + +K + I E + + L+ K L + + Sbjct: 365 YEKMISMDFIKNLSEKMKYDISEFSKKL-----------MLDYKYLKDTLELKINNINQQ 413 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + T + + + LS+ ++ L + ++ G + Sbjct: 414 VERY-TKLSDTLEKEYSNLSNLVEEKKEEFVKIGGPLSALSF------GGAVVL-KGRKI 465 Query: 473 ITQKRNLATKTRILINFFDGQANAIVINK 501 I K+ L+T ++INF DG+A A + K Sbjct: 466 IQSKKELSTGENVIINFIDGKAQATISGK 494 >gi|229552484|ref|ZP_04441209.1| exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1] gi|229314221|gb|EEN80194.1| exodeoxyribonuclease VII [Lactobacillus rhamnosus LMS2-1] Length = 293 Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats. Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 57/342 (16%) Query: 165 RISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIED 223 ++ R+P+ ++I+FP VQGD+ I + ++ +T D +I+ RGGGSIED Sbjct: 1 TVARRYPILQLILFPAIVQGDQAADSIVKQLNRI------KTMSGFDAVIIGRGGGSIED 54 Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVK---EH 280 LW FN+E + RA+A ++PI+S++GHETD T+AD+ AD RA TPT AAE+ PV Sbjct: 55 LWPFNEEKVARALAEMAMPIVSSVGHETDTTIADFVADRRAATPTAAAEIVTPVTLVDAL 114 Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340 + S + ++ L D+ R+D+L + L+ ++ Sbjct: 115 NRISEDQVRLVNAMHNRLKNAATRLQRSAQSVVLTQPDRLYDQYVQRVDQLRQRLQQSIN 174 Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + ++ L+ + ++ ++ ++ +++ Sbjct: 175 NQLRENEHRLAMATAQLDGRQLLVKVANLQRQQVDDRRRLDR------------------ 216 Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + + H +V+ L + L R Sbjct: 217 -----------------------------AMIALVTAKHQAVANAALGLDHLSPLKILGR 247 Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 G+ + D + + I I+ DGQ A V K Sbjct: 248 GFAFVTDDAGKMLKTTADYQVDAAIHIHVADGQIGARVTTKE 289 >gi|213029515|ref|ZP_03343962.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 230 Score = 151 bits (380), Expect = 4e-34, Method: Composition-based stats. Identities = 94/232 (40%), Positives = 130/232 (56%), Gaps = 9/232 (3%) Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPV 179 E+ K KL EGLF QHK P+P + VITS TGA + DIL + R P L VII+P Sbjct: 4 EQLKAKLHAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPT 63 Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANS 239 VQGD+ P +I AI NT E D++I+ RGGGS+EDLW FNDE + RAI S Sbjct: 64 AVQGDDAPGQIVRAIELANTRGE------CDVLIVGRGGGSLEDLWSFNDERVARAIFAS 117 Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 IP++SA+GHETD T+AD+ ADLRAPTP+ AAE+ ++ L + + + RL + Sbjct: 118 RIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYY 177 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRL--DRLPRELEHNLEIIIFRKYRH 349 + + + L L +R + +RL + + LE I + + Sbjct: 178 LANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQR 229 >gi|332667033|ref|YP_004449821.1| Exodeoxyribonuclease VII [Haliscomenobacter hydrossis DSM 1100] gi|332335847|gb|AEE52948.1| Exodeoxyribonuclease VII [Haliscomenobacter hydrossis DSM 1100] Length = 409 Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats. Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 30/362 (8%) Query: 16 SVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNH-------SRIDAI 67 S+ +L L+ +V N + VR EI+ S GH Y L + ++ A Sbjct: 5 SLFDLQTFLRQVVALNFPEALWVRCEIAQLSK--SRGHVYLDLVEKAETENEPIAQASAA 62 Query: 68 IWKGTLNKIEFLP---------EEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGTLL 117 IW+ TL +++ + G+E L+ K+ + ++++E + PS G L Sbjct: 63 IWQSTLKRLQSKLGATNLNPLLQAGVEVLLRVKVE-YHERYGLKLVVEDIDPSYTLGKLE 121 Query: 118 TALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC---RFPLRV 174 + ++L+ +GL + P+ + + IA+I+S T A +D LQ + + + Sbjct: 122 QRRRQLYEQLVAQGLMGKNAQIPLRPVLQRIAIISSATAAGYQDFLQHLGENAYGYAFKT 181 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 F VQG + E+ + + R R D + L RGGG+ DL F+ + + Sbjct: 182 TFFAAAVQGAQVEVEVLKQLRAV-----QRQATRFDAVALIRGGGAKLDLAGFDSLALCQ 236 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 AIA+ +P+ + IGH+ D TL D A TPT A+ + H +S L L L Sbjct: 237 AIADFPLPVFTGIGHDVDETLVDLVAHSALKTPTAVADFLIQHNLHFESQLAELSQYLRY 296 Query: 295 IIIRLIKYKINTLNSLLKALP-NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 + I + L + ++AL Q L + L R EL L +++ + Sbjct: 297 VTAESIHVALLQLAASVQALQTAPVQLLDRQKDYLQRFAAELPLALRYQQREQWQRLEQM 356 Query: 354 IN 355 Sbjct: 357 EQ 358 Score = 77.9 bits (190), Expect = 4e-12, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 51/140 (36%), Gaps = 4/140 (2%) Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 +DFLI + + E Q++ + + + L + A + L+ + Sbjct: 273 ADFLIQHNLHFESQLAELSQYLRYVTAESIHVALL---QLAASVQALQTAPVQLLDRQKD 329 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 ++++ + L ++ + + +I Q + + TL+RG++ I + Sbjct: 330 YLQRFAAELPLALRYQQREQWQRLEQMEQICQLLSIEGTLQRGFSLTLKA-GKPIASAQQ 388 Query: 479 LATKTRILINFFDGQANAIV 498 + I DG + V Sbjct: 389 ARQGDVLDIQLKDGTLRSKV 408 >gi|238809723|dbj|BAH69513.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 356 Score = 147 bits (370), Expect = 6e-33, Method: Composition-based stats. Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 21/352 (5%) Query: 12 HPEYSVSELSYHLKHIVESNL-SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 S+ +L+ +K +++N ++ IS + HAY ++ D +A IW Sbjct: 13 SNVMSLGKLNNIIKDNLKNNFWQTYWIKASISKLSIKN---HAYLNIVDGEYSSNAAIWA 69 Query: 71 GTLNKIEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESL-IPSGSGTLLTALEKR 123 + I + + + I+ + ++ IE + EK Sbjct: 70 SKIPNIGIDITSNNKDLYSHAYFMNVSISPYSLNNSVSYSIEQIIDLDTYSKEKIEKEKL 129 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQ 182 KK L +G F K PIP + IAVI + +G +RD+ + RFP+ + +F VQ Sbjct: 130 KKLYLSKGYFDPNRKRPIPKYCEYIAVIAAESGQAVRDVYTTVLSRFPIANLKLFNSSVQ 189 Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 G + +I I N D+II+ARGGGS DL FN E IV AI S IP Sbjct: 190 GQQALIDIPKQIANANK-------ENFDVIIIARGGGSTVDLEIFNQEAIVNAIVESKIP 242 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 I++AIGH D + +D AD TPTGAA++ VP KE + S L N AR N I +++ Sbjct: 243 IVTAIGHTDDISFSDLIADAYGNTPTGAAKLVVPDKEEILSLLRNYRARNQNYINKMLLD 302 Query: 303 KINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 N L L + + + + ++++ ++++ +++ + Sbjct: 303 SQNKLKKLAQKIYEFKPELIIEQYENKVNKFKEFIKNHKILLLQKLETKIKE 354 >gi|309808825|ref|ZP_07702710.1| putative exodeoxyribonuclease VII large subunit [Lactobacillus iners LactinV 01V1-a] gi|308167951|gb|EFO70084.1| putative exodeoxyribonuclease VII large subunit [Lactobacillus iners LactinV 01V1-a] Length = 131 Score = 143 bits (361), Expect = 6e-32, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 74/130 (56%), Gaps = 3/130 (2%) Query: 10 LDHPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 +V++L+++L +++ L V ++GE+S +R +S YFSLKD S+I+A+ Sbjct: 3 TSPKYLTVTDLNFYLSKKFKNDPYLHKVFLQGEVSNFRLRMNS-TQYFSLKDEKSKINAV 61 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 ++K K++F EG++ V G I + YQ + ++ P+G G L L + ++KL Sbjct: 62 MYKSFFEKVKFKLVEGMKVYVSGYIDLYSPQGSYQFYVHTIEPAGLGALFEQLRQLREKL 121 Query: 128 LEEGLFSDQH 137 +EGLF+D Sbjct: 122 DKEGLFADSQ 131 >gi|257487187|ref|ZP_05641228.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 242 Score = 143 bits (361), Expect = 6e-32, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 105/277 (37%), Gaps = 47/277 (16%) Query: 224 LWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQS 283 +W FN+E + RAI PI+SA+GHETD +++D+ AD+RAPTP+ AAE+ P Sbjct: 1 MWCFNEEAVARAIDACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSD--- 57 Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 R+D L R L ++ + Sbjct: 58 ----------------------------------------LHRRVDSLHRGLVSRMQDRL 77 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 R+ I R++ +++ Q + + + + +Q++ + + L Sbjct: 78 MRERLRLEGISRRLR--HPGERLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLA 135 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + + +L + L R+ + +IK+ + + L + TL RGY+ Sbjct: 136 A--QHPGRTLGFLRQRLDALAERLPRAIREQIKARKLQLQSQVQTLNVVSPLATLGRGYS 193 Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 + D + I T R+ +G+ V + Sbjct: 194 ILLDERGHAIRNAAQTRTGQRLTARLGEGELQVRVED 230 >gi|330813630|ref|YP_004357869.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp. IMCC9063] gi|327486725|gb|AEA81130.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp. IMCC9063] Length = 118 Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 4/118 (3%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + PE+SVSE++ K I+E N + V+GEIS + GH YFSLKD + ++++ W Sbjct: 3 NIPEFSVSEITNLTKSILEDNFGLIRVKGEISKVKDF--KGHYYFSLKDENFVLNSVCWS 60 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGS--SKYQIIIESLIPSGSGTLLTALEKRKKK 126 + + PEEG+E GK+TT+ S YQ+ ++ + G G LL E+RKK Sbjct: 61 RNVPFLNMKPEEGMEVFAQGKLTTYAKGSISNYQLQVDQIDAQGEGALLKIFEQRKKN 118 >gi|301064524|ref|ZP_07204921.1| exonuclease VII, large subunit [delta proteobacterium NaphS2] gi|300441370|gb|EFK05738.1| exonuclease VII, large subunit [delta proteobacterium NaphS2] Length = 259 Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats. Identities = 71/298 (23%), Positives = 130/298 (43%), Gaps = 48/298 (16%) Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 D+I+L RGGGS+EDL FN+E + AI S IP++SA+GHE D T++D A+D RAPTP+ Sbjct: 2 DVIVLTRGGGSLEDLQAFNEEALALAIRQSRIPVVSAVGHEIDVTISDLASDFRAPTPSA 61 Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329 AAE+ V KE L++ LI+L +R+ ++ +Y TLN+L L + + L+ + LD Sbjct: 62 AAELLVAEKEALKNRLIDLRSRMVAVMGHQQRYYRETLNNLKDRLKDPRRRLANAWLHLD 121 Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 L + L + ++ R N N + + + + +RQH+ ++ + + Sbjct: 122 ELQQRLSRLMYFVLHRSRMAVNEKSNALLTHSPKNRVASHRQHLAFQKSSLVRA------ 175 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + ++++ + + + L Sbjct: 176 -----------------------------------------MQNELRGLGMRLDLLKKGL 194 Query: 450 QSFAYKNTLKRGYTSIQD-TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 LKRGY+ D + + + + ++++ +G+ V Sbjct: 195 WDLNPTAILKRGYSITFDLPDERILKRASAIQPGDQVMVLLGEGRLICRVEKAETDPG 252 >gi|309808799|ref|ZP_07702684.1| Exonuclease VII, large subunit [Lactobacillus iners LactinV 01V1-a] gi|308167925|gb|EFO70058.1| Exonuclease VII, large subunit [Lactobacillus iners LactinV 01V1-a] Length = 299 Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats. Identities = 88/338 (26%), Positives = 140/338 (41%), Gaps = 55/338 (16%) Query: 137 HKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECPKEIANAIL 195 +K IP P IAV+TS +GAVI DI+ + RFP + + +FP VQG + I ++ Sbjct: 5 NKKKIPKFPDKIAVVTSASGAVIHDIMVTANRRFPHVEIDLFPTIVQGKDAAASIIASLQ 64 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTL 255 Q+ + + D++I+ RGGGS+EDLW FN+EM+VR I + ++P+IS++GHETD TL Sbjct: 65 QIAA-----SQDKYDVVIIGRGGGSLEDLWPFNEEMVVRQIYSMTMPVISSVGHETDTTL 119 Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--A 313 +D AD RA TPT AAE A P + +I L L I +I N Sbjct: 120 SDLVADKRAATPTAAAEYATPELSAITLQIIELRTHLYAAIRSIINSDKILFNRTKNSVF 179 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + LD L ++LE + + + + S I+ + Q + Sbjct: 180 LREPQRFYDEKMQTLDLLEQKLEQVANNYLLNVKTKYQLVNQSLLSTNPHQIIKHHYQEL 239 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + K Q + + + Sbjct: 240 IFKTQ-----------------------------------------------NLNKSMCY 252 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 I + + ++ L + + RGY + + Sbjct: 253 LINNNKNNFYNLSQKLDDNSPLKAISRGYVYTANEDGK 290 >gi|126641270|ref|YP_001084254.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii ATCC 17978] Length = 392 Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats. Identities = 71/347 (20%), Positives = 128/347 (36%), Gaps = 23/347 (6%) Query: 38 RGEISGYRGIHSSGHAYFSL--KDNH-----SRIDAIIWKGTLNK--IEFLPEEGIE--- 85 R EI GH Y L KD + A IWK + +K ++F E GIE Sbjct: 2 RAEIRNLNVK--GGHYYLELAEKDADTDKVIASCKATIWKFSASKIVLKFERETGIELAS 59 Query: 86 ---FLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPI 141 L+ + F + + IE + S G + ++ ++L +EGL P Sbjct: 60 DLNVLIKIRAR-FDPQYGFSVNIEEIDSSFTLGEIAKRYQQIVERLTQEGLIHKNKLLPT 118 Query: 142 PFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLN 198 PF + + VI A + D + + QG+ + ++ Sbjct: 119 PFDIQNVLVIAPQNAAGLGDFKKDADALERNGVCHFVYQSATFQGNTAAVSLMESLATGL 178 Query: 199 TLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADY 258 PD+I++ RGGG++ DL + ND + + S+PI IGHE D T+ D Sbjct: 179 KQWANNFNFPPDLIVIIRGGGAVNDLAYLNDYELAALLCKRSVPIWVGIGHEKDRTILDE 238 Query: 259 AADLRAPTPTGAAEMAVPVK-EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 A TP+ E +Q ++ NL+ ++ Y+ + L ++ Sbjct: 239 IAHRSFDTPSKVIAGIRNHIVERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSA 298 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ + L+++ ++ + + ++ I Sbjct: 299 QAQLNSAHQFLEQIKERIQFVSQQQVKFSLSQTESLMREILLQNPKQ 345 Score = 74.4 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 2/135 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + E +++ I I + + L ++ + ++ H ++++ RI+F+ Sbjct: 260 ERVQEAVDNLQTIKLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFV 319 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 ++K + R + K +GY ++ I + T + I ++ Sbjct: 320 SQQQVKFSLSQTESLMREILLQNPKQIQAKGYAIVRSE-GKAIRSIHQI-TNSTITVDMQ 377 Query: 491 DGQANAIVINKAPPK 505 DG NA + P + Sbjct: 378 DGAINANITEVIPNE 392 >gi|217076340|ref|YP_002334056.1| exodeoxyribonuclease VII large subunit [Thermosipho africanus TCF52B] gi|217036193|gb|ACJ74715.1| exodeoxyribonuclease VII large subunit [Thermosipho africanus TCF52B] Length = 481 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 165/438 (37%), Gaps = 72/438 (16%) Query: 83 GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIP 142 G +++ G+++ F + +++ P G + ++ K+L L + + Sbjct: 92 GKKWIFQGRLSFFRDRMSFTFYADTIAPMGESEIEKRRKEILKELEVRNLLMKEKHDLSE 151 Query: 143 FIP-KIIAVITSPTGAVIRDILQRISCRFPLR--VIIFPVKVQGDECPKEIANAILQLNT 199 P K IA+ITS + A D L+ ++ + R V ++ +QG + I A+ ++ Sbjct: 152 LPPIKKIAIITSKSAAGYEDFLKNLTVHYLYRPIVHLYESPMQGAQTASGIILALNRIRK 211 Query: 200 LKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV--RAIANSSIPIISAIGHETDWTLAD 257 + D++++ARGGG+ DL +F+D + A N PI+S IGHE D+T+ D Sbjct: 212 -----SNIDYDVVVIARGGGARSDLMYFDDLSLGIEIAKFNEYCPILSGIGHERDFTIPD 266 Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 Y A R TPT A E L + L ++ + K T+ L Sbjct: 267 YVAWKRFATPTEVARAISKQIEDNVKKLDDSYNDLRILLSNVFKIYERTVELGL------ 320 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 +D + + + + I+ + I N + I + Sbjct: 321 ----------IDYMKKVIGSDFIKIVKDLDETYEKIENFVSY------------KINDSS 358 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 Q + + L + +N++ ++ +E +S + + Sbjct: 359 QRLSE-----------------DFLRFMSNSLENKLKSKKDSVENFEKILERDISILLSN 401 Query: 438 CHTSVSITTRILQSFAYKNTLKR--------GYTSIQDTNNNFITQKRNLATKTRILINF 489 T ++ T + L LKR G + + +F+ R + ++ + Sbjct: 402 KETMLNETFQEL--------LKREEFAPLLFGGALVM-KSGHFVKSIRQMKIGDKLDLYL 452 Query: 490 FDGQANAIVINKAPPKEQ 507 DG+ V+ + K++ Sbjct: 453 KDGKVKTKVVTEKKIKKE 470 >gi|226323206|ref|ZP_03798724.1| hypothetical protein COPCOM_00978 [Coprococcus comes ATCC 27758] gi|225208396|gb|EEG90750.1| hypothetical protein COPCOM_00978 [Coprococcus comes ATCC 27758] Length = 239 Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats. Identities = 63/297 (21%), Positives = 117/297 (39%), Gaps = 69/297 (23%) Query: 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267 + D++I+ RGGGSIEDLW FN+E + RA+ S+P+ISA+GHETD T+ DY ADLRAPTP Sbjct: 12 KVDVMIVGRGGGSIEDLWAFNEEKVARAVFECSVPVISAVGHETDTTIIDYVADLRAPTP 71 Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 + AAE+A+ L +T+ R R Sbjct: 72 SAAAELAICNYRELL------------------------------------ETIRTERER 95 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + R ++ + H + + ++ RQ + + ++ I + + Sbjct: 96 MHR-------SMRRKLEVASLHTARYAEKFRYLSPSGKLKSMRQQLADYEEQIPKAMH-- 146 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 R+ +K+ + ++ ++ ++I Sbjct: 147 -----------------------QRLEQEQERTRKVQEMLPLLMERNLRESRQQLAIRIE 183 Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 ++ + L +G++ +Q + + + ++ + I DGQ A V + Sbjct: 184 RMKGLSPLAKLNQGFSYVQGSEGT-VKKVADVKKGDWLRIYVTDGQIEAQVTDTKKE 239 >gi|110639689|ref|YP_679899.1| exodeoxyribonuclease VII large subunit [Cytophaga hutchinsonii ATCC 33406] gi|110282370|gb|ABG60556.1| exodeoxyribonuclease VII, large subunit [Cytophaga hutchinsonii ATCC 33406] Length = 387 Score = 136 bits (341), Expect = 1e-29, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 139/338 (41%), Gaps = 35/338 (10%) Query: 11 DHPEYSVSELSYHLKHIVESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNH-----SR 63 P +SE ++ + + + EIS Y L + + Sbjct: 7 SIPSIRLSEFISEIEDCLAATFYGDTFWITTEISDVNKKPDKRWCYLKLIEKEGKNVTAE 66 Query: 64 IDAIIWKGTLNKI-------EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115 I A+ W I + L ++G+E K+T F ++ I + + G Sbjct: 67 IGAVFWTPGYAYIEKFEKETKQLFKDGLEITCRVKVT-FHKRWGLKLEIVEIDYAYTLGK 125 Query: 116 LLTALEKRKKKLLEEG----------LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 L ++ +L++E ++ P+P + + IA+IT+P RD Q Sbjct: 126 LEAERQETLDRLVKENPDYVRLVGEQYYTFNKSLPLPAVVQRIALITAPESDGQRDFRQE 185 Query: 166 ISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 + + V F ++QGD+ + I +L + KE + D++ + RGGGS Sbjct: 186 LGNNPYGYAFHVDEFVTQIQGDKAHEFIIGKLLLIEAQKE-----KYDVVAIVRGGGSQL 240 Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 DL F+ + + IA+ +PI++ IGH+ + ++AD A + TPT A + + + Sbjct: 241 DLKAFDAYDLAQRIASFPVPILTGIGHDRNTSIADLMA-RQEKTPTKVANVIIQRNFQFE 299 Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 +++ L+ R+ + + L N L + + + S+ Sbjct: 300 QTVLILKERMVHTVDGLFTNAKNNLKEIKRFVKASNPL 337 Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 9/150 (6%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF--------YL 416 + + Q I L I ++ IA L +E+T ++ Sbjct: 239 QLDLKAFDAYDLAQRIASFPVPILTGIGHDRNTSIADLMARQEKTPTKVANVIIQRNFQF 298 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 + L R+ + + ++ R +++ LK+G+ ++ +N IT Sbjct: 299 EQTVLILKERMVHTVDGLFTNAKNNLKEIKRFVKASNPLTILKKGFAIVK-QDNVIITDP 357 Query: 477 RNLATKTRILINFFDGQANAIVINKAPPKE 506 + T I I F + V K + Sbjct: 358 SAIDVGTEIQIQFDKETVQSTVTKKKKNGK 387 >gi|150021779|ref|YP_001307133.1| exodeoxyribonuclease VII [Thermosipho melanesiensis BI429] gi|149794300|gb|ABR31748.1| Exodeoxyribonuclease VII [Thermosipho melanesiensis BI429] Length = 478 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 91/510 (17%), Positives = 176/510 (34%), Gaps = 86/510 (16%) Query: 19 ELSYHLKHIVES--------NLSHVCVRGEISGYRGIHSSGHAYFSLKDN--------HS 62 EL+ ++ +++S VR I HSSG Y + + Sbjct: 9 ELNEYVTRVIDSTGLTSETFRFYADVVRANI------HSSG-LYIDVSQTYPVRNGTRNI 61 Query: 63 RIDAIIWKGTLNKI--EFLPEE-----GIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115 I I K ++ G +++ GK++ + + +++ P G Sbjct: 62 EITVYIPKYMYPRMLAAIGLRNAKGLVGKKWIFQGKLSFYKDRMSFTFFADTIAPVGESE 121 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIP-KIIAVITSPTGAVIRDILQRISCRFPLR- 173 + ++ ++L L + + P K IAVI+S T A D L+ + + + Sbjct: 122 IEKRKKEILRELKLRNLLMLEKHDLSELPPIKKIAVISSKTAAGYEDFLKNLKVGYLYQP 181 Query: 174 -VIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 V ++ +QG I A+ ++ + +++++ARGGG+ DL +F+D + Sbjct: 182 IVHLYESPMQGANTAAGIILALERIKR-----SNIDYNVVVIARGGGAKSDLMYFDDLAL 236 Query: 233 VRAIANSS--IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 IAN + P++S IGHE D+T+ DY A R TPT A + + + Sbjct: 237 GVEIANFNNYCPVLSGIGHERDFTIPDYVAWKRFATPTEVARAISRQIDDNVRQIDDNWN 296 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 L +++ + L N L+ +D + + L+ ++ Sbjct: 297 DLKLLMMNI--------------LKNISTLLN--TQLVDYINKTLKVTFLGYEDLFENYY 340 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 ++ N + F + + + + Q +E + + K + Sbjct: 341 ENLKNHLNYIFEFSSRKISEDFLSFISQRMEGNLNAKKGELIGYAKLIEKDFAL------ 394 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 I + I +K L G + Sbjct: 395 --------KISNKEALLNQIFQELLKKEE---------------LAPLLFGGAIVMKGRK 431 Query: 471 NFITQKRNLATKTRILINFFDGQANAIVIN 500 I+ R L +I I DG+ NA + N Sbjct: 432 K-ISSVRKLRMGEKIEIYLKDGKINAKISN 460 >gi|284035434|ref|YP_003385364.1| exodeoxyribonuclease VII [Spirosoma linguale DSM 74] gi|283814727|gb|ADB36565.1| Exodeoxyribonuclease VII [Spirosoma linguale DSM 74] Length = 404 Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats. Identities = 68/339 (20%), Positives = 138/339 (40%), Gaps = 40/339 (11%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSL-----------KDNHSR 63 +S+L++ L+ +++ V V E S + G+ + +L +D ++ Sbjct: 6 LSDLAFTLEAVIDEAFGQKAVWVVAETSDIKNYPDRGYCFLTLVERDATSGTSGRDTLAK 65 Query: 64 IDAIIWKGTLNKI-EFLPEEG------IEFLVIGKITTFPGSSKYQIIIESLIPS-GSGT 115 +DA +W+ + I +F E G I+ L++ ++ F ++ I + PS G Sbjct: 66 LDACVWRKNYHTISDFERETGVAFARNIQLLLLVSVS-FSPVYGLRLEILKIDPSYTLGN 124 Query: 116 LLTALEKRKKKLLEE----------GLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 L ++ L+++ + P P + + +A+IT+P RD Sbjct: 125 LERERQQVLDTLVQKHPDLVWLEAGQYITANQLLPRPSVMQRLALITAPNSDGWRDFRHE 184 Query: 166 ISC---RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 ++ + V + +VQG + I + + ++ + D +++ RGGGS Sbjct: 185 LAQNPFGYDFVVDEYLTQVQGQGAERAICSQLERI-----RSSELAYDAVVIVRGGGSQL 239 Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 D F+ ++ +A IP+++ IGHE + ++ D TPT AA + + Sbjct: 240 DFGSFDTYLMGHTVAGFPIPVLAGIGHERNVSITDLLCHQSVKTPTKAAAFLIEHNRQFE 299 Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 S + L RL + + L+ + L QT Sbjct: 300 ESCLILRERLRVVTREAFQTAREDLDRETERLRFVSQTY 338 Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 1/101 (0%) Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + LR T+ + + R+ F+ ++CHT+++ L+ N L Sbjct: 303 LILRERLRVVTREAFQTAREDLDRETERLRFVSQTYFRACHTNLAEKVVTLRHLDPSNVL 362 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVI 499 +RGY + N +TQ ++ + + +DG N +V Sbjct: 363 RRGYALLLR-NGRILTQTADVQPNEILQVQMYDGSINIVVS 402 >gi|294614726|ref|ZP_06694628.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636] gi|291592464|gb|EFF24071.1| exodeoxyribonuclease 7 large subunit [Enterococcus faecium E1636] Length = 248 Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats. Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 50/296 (16%) Query: 212 IILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAA 271 +I+ RGGGSIEDLW FN+E + RAI ++ P+IS++GHETD T+AD AD+RA TPT AA Sbjct: 1 MIIGRGGGSIEDLWPFNEERVARAIYQANTPVISSVGHETDTTIADLVADVRAATPTAAA 60 Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLD 329 E+AVPV + +ARL +R I+ K + ++ +LD Sbjct: 61 ELAVPVLSEELMRIQERQARLQQAFVRQIQRKQERFERARRSYVFRQPERLYEGQTIKLD 120 Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 +L + L + I K + + ++++ ++ ++ RQ ++ +E Sbjct: 121 QLKQRLYQATQQIYHAKEKQTIALSHQLEQVAPLYRVKAARQETAYLEKRLE-------- 172 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + ++K+ R + + L Sbjct: 173 ------------------------EKIQQYMKQQQQRFAQAV---------------QSL 193 Query: 450 QSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + RGY+ N+ + + + I++ DG V + Sbjct: 194 DLLSPLKIMGRGYSYTTL-NDQVVKSVSEIHQGDLLTIHYQDGIVKGQVQEIDKGE 248 >gi|255532093|ref|YP_003092465.1| exodeoxyribonuclease VII [Pedobacter heparinus DSM 2366] gi|255345077|gb|ACU04403.1| Exodeoxyribonuclease VII [Pedobacter heparinus DSM 2366] Length = 464 Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats. Identities = 84/403 (20%), Positives = 163/403 (40%), Gaps = 39/403 (9%) Query: 17 VSELSYHLKHIVESNLSH--VCVRGEISGYRGIHSSGHAYFSL--KDNHS-----RIDAI 67 +SEL+ ++ ++ + V +IS + + + YF L KD S +I Sbjct: 15 LSELATQIRQAIDGVFGNRTFWVIADISSHTYKSQTNYHYFELVEKDKGSAKILSKIAGR 74 Query: 68 IWKGTLNKI-EFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTA 119 W I F G + LV + + + Q+ + + S G Sbjct: 75 AWGNASVNISNFEQATGQKFQNDINVLVQVAVQ-YNPAFGLQLNLLDIDTSFTLGLFEQQ 133 Query: 120 LEKRKKKLLEEG----------LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 ++ +LL E F+ + + + IAVI+S T A +D + Sbjct: 134 RKETLARLLRENPDFIQKAGEQYFTRNGSLALNRVLQRIAVISSATSAGYQDFKHTLENN 193 Query: 170 -FPLRVII--FPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWH 226 F R II + VQG+ ++ I+++ + D +++ RGGG+ D Sbjct: 194 TFGYRFIIDDYFTPVQGEANARQFLAKIVEVFQ-----SGKPYDTLVIIRGGGAQTDFLI 248 Query: 227 FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 F++ + RAIA +P+I+ IGH+ + T+AD A TPT AAE+ + + +L+ Sbjct: 249 FDNYELSRAIAKFPVPVITGIGHQKNETIADLMAHTATKTPTKAAELIIAHNRAFEENLL 308 Query: 287 NLEARLNNIIIRLIKYKINTLNS-LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 ++ + +LI Y + L + S L + + L R + N II+ Sbjct: 309 GMQKMMLIKTYQLINYHKDRLAQLNQTTISTSRGLLHEQQLHIISLSRMVLGNPRIILSN 368 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + + +++I ++S N++ + Q + +++ Sbjct: 369 RQKDLSNLIGNMQSY--NRMYFANKRGYIGHFQSVVRLMSPQN 409 >gi|255027669|ref|ZP_05299655.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J2-003] Length = 256 Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 50/298 (16%) Query: 207 PRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPT 266 D++I+ RGGGS+E+LW FN+E +VRA+ +S +P+ISA+GHETD+ L+D++AD+RA T Sbjct: 1 NDIDVMIIGRGGGSLEELWAFNEEPVVRAVYDSDVPVISAVGHETDFALSDFSADVRAAT 60 Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCS 324 PT AAE+AVP L+ L + RL + + ++ K +L L + L L Sbjct: 61 PTAAAELAVPDYRDLEERLAERKYRLLAVTRQALERKERSLEQLKQHLILNGPKHQLEQQ 120 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R D L + IF K F+ + +R+ I+ ++ + Q +++ + Sbjct: 121 MERTDYFSERLNNAFSKQIFVKQTAFDRLNDRLHYYHPNKEIELQKEQMTLHLQALDKAM 180 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 KQ L+ ++ Sbjct: 181 KQLLKDKQQSFFRQVDA------------------------------------------- 197 Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 L+ + + LKRG+ N + + L I + G A++ K Sbjct: 198 ----LEHLSPLSLLKRGFGVTY-KENTLVKSVQELEVGDNIQVKMQGGHIGALITAKE 250 >gi|320335696|ref|YP_004172407.1| Exodeoxyribonuclease VII [Deinococcus maricopensis DSM 21211] gi|319756985|gb|ADV68742.1| Exodeoxyribonuclease VII [Deinococcus maricopensis DSM 21211] Length = 401 Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 26/280 (9%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLK--DNH----SRIDAI 67 +SEL ++ ++ + V VR EI+ H Y L D ++ Sbjct: 16 LELSELLGYVAQVLHQGVPGGVWVRAEIAQLTDRR---HLYLDLVQADEDGRELAKARGT 72 Query: 68 IWKGTLNKI--EFL------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLT 118 +W + +F G+ L++ + + + + + P G + Sbjct: 73 VWARERFALEGKFRRATGAGLTAGLRVLLMVTVEFHEQYG-FSLNVVDVAPEFTVGDMAQ 131 Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ---RISCRFPLRVI 175 L + + L EGL+ P+P + V++ A + D + R+S + Sbjct: 132 QLARLRVALEAEGLYGLNRALPLPEDFTRVLVLSPAGAAGLGDFTREADRLSRAGVVNFT 191 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRA 235 QG E + A+ + L D +++ RGGG+ DL ND + RA Sbjct: 192 YLSATFQGREASASLTAALAEARRLHAEEA---FDALVIIRGGGASTDLAWLNDLAVARA 248 Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275 +A P+++ +GH D T+ D A +R TP+ AA+ Sbjct: 249 VAAFPAPVVTGLGHARDDTILDEVARVRCDTPSKAAQFIT 288 Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 16/118 (13%), Positives = 36/118 (30%), Gaps = 1/118 (0%) Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + R + A +R + + + L R+ ++++ Sbjct: 283 AAQFITRVVVEAAGAAEAAYAQVRGAARAAVHEAKLSVSALRVRVLGAARARVEADAAGA 342 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 R + + TL RGY ++D + + + F DG+ V + Sbjct: 343 DAHMRAVLGLTPERTLARGYALVRDAAGRVVRDAAGARA-GALTLTFQDGEVRVRVDD 399 >gi|148530038|gb|ABQ82226.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 116 Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats. Identities = 48/116 (41%), Positives = 76/116 (65%) Query: 67 IIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK 126 ++W+G+++++ PE G+E + GKI+++ S YQ+II+ L +G G LL +E+ + K Sbjct: 1 VVWRGSVSRLGLKPENGVEVVATGKISSYGERSSYQLIIDRLDYAGEGALLARIERLRLK 60 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQ 182 L EGLF K +PF+P +I V+TS GAV+ DI I RFP R++++PV VQ Sbjct: 61 LAAEGLFDAAGKRALPFLPDVIGVVTSAQGAVMHDIRTTIGRRFPRRLLVWPVAVQ 116 >gi|325282598|ref|YP_004255139.1| Exodeoxyribonuclease VII [Deinococcus proteolyticus MRP] gi|324314407|gb|ADY25522.1| Exodeoxyribonuclease VII [Deinococcus proteolyticus MRP] Length = 402 Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats. Identities = 73/339 (21%), Positives = 123/339 (36%), Gaps = 28/339 (8%) Query: 3 PFSQKNSLDHPE---YSVSELSYHLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLK 58 P ++++ P +SEL ++ ++ L V VR EI+ H Y L Sbjct: 6 PARRQSTEAPPPSQWLELSELLDYVGQVLGRGLPGAVWVRAEIAELTDRR---HLYLELI 62 Query: 59 D-----NHSRIDAIIWKGTLNKIEFLPE--------EGIEFLVIGKITTFPGSSKYQIII 105 +R A +W +E G++ L+ F + + I Sbjct: 63 QLEGGQQVARCRAALWARERYALEAKFRRVTGGGLGTGMKVLLFCTAE-FHAQYGFSLHI 121 Query: 106 ESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQ 164 + + P G L ++++L EG++ P+P +AVI A + D + Sbjct: 122 QDISPEFTLGEAAARLNAQREQLQAEGVYGLNRALPLPADYARVAVIAPEGAAGLGDFHR 181 Query: 165 R---ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSI 221 + L + QG E + +A+ + L G+ D +++ RGGG+ Sbjct: 182 EVAPLQAAGVLELHYLRATFQGREAGASLTHAVAEALALHAGQP---LDALVVIRGGGAT 238 Query: 222 EDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281 DL ND RA+A P+I+ +GH D TL D A LR TP+ AA V Sbjct: 239 TDLAWLNDLEFGRALARFPAPVITGLGHARDDTLPDELAALRTDTPSKAAAHIVRTVVGA 298 Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + + + L L + Q Sbjct: 299 AAQAQADWQAIRRAGAEEAAGADAGVRWLRDRLRAAAQR 337 Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 38/116 (32%), Gaps = 1/116 (0%) Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 +R + + A +R ++ L R+ ++ V Sbjct: 287 AAAHIVRTVVGAAAQAQADWQAIRRAGAEEAAGADAGVRWLRDRLRAAAQRQLTGAERDV 346 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 + R + + TL RGY ++ +T L ++ + F DG+ A + Sbjct: 347 TALMRSAVGLSPERTLGRGYAVVRG-GGRVVTHAAELRAGEQVTLQFADGEVRAEI 401 >gi|33322198|gb|AAQ06820.1|AF496159_1 exodeoxyribonuclease large subunit [Lactobacillus delbrueckii subsp. lactis] Length = 157 Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats. Identities = 71/162 (43%), Positives = 104/162 (64%), Gaps = 6/162 (3%) Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFP-LRVIIFPVKVQGDECP 187 +EGLF+ +HK P+P P IAV+TS +GAVI DI+ + RFP + +FP +VQG+ Sbjct: 1 KEGLFAQEHKRPLPLFPDKIAVVTSASGAVIHDIMVTANRRFPHAEIDLFPAQVQGESAA 60 Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + +A+ Q+ + D++I+ RGGGS+EDLW FN+E +VR + +P+IS++ Sbjct: 61 GSLVSAMQQIQARADE-----YDVLIIGRGGGSLEDLWPFNEEEVVRQVYAMKMPVISSV 115 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 GHETD TL D AAD RA TPT AAEMA P +++ + + Sbjct: 116 GHETDTTLCDLAADCRAATPTAAAEMATPALTPVRAEMASCR 157 >gi|330874753|gb|EGH08902.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. glycinea str. race 4] Length = 221 Score = 119 bits (299), Expect = 8e-25, Method: Composition-based stats. Identities = 47/256 (18%), Positives = 92/256 (35%), Gaps = 47/256 (18%) Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SA+GHETD +++D+ AD+RAPTP+ AAE+ P Sbjct: 1 SAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSD------------------------ 36 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 R+D L R L ++ + R+ I R++ Sbjct: 37 -------------------LHRRVDSLHRRLVSRMQDRLMRERLRLEGISRRLR--HPGE 75 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ Q + + + + +Q++ + + L + + +L + L Sbjct: 76 RLRQQSQRLDDLDMRLRRAFEQNMHQRQVRLAHMQSRLAA--QHPGRTLGFLRQRLDALA 133 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 R+ + +IK+ + + L + TL RGY+ + D + I T R Sbjct: 134 ERLPRAIREQIKARRLQLQSQAQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTRTGQR 193 Query: 485 ILINFFDGQANAIVIN 500 + +G+ V + Sbjct: 194 LTARLGEGELQVRVED 209 >gi|15805222|ref|NP_293910.1| exodeoxyribonuclease VII large subunit [Deinococcus radiodurans R1] gi|14194738|sp|Q9RXW9|EX7L_DEIRA RecName: Full=Exodeoxyribonuclease 7 large subunit; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit gi|6457855|gb|AAF09773.1|AE001881_2 exodeoxyribonuclease VII large subunit, putative [Deinococcus radiodurans R1] Length = 416 Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats. Identities = 63/285 (22%), Positives = 104/285 (36%), Gaps = 31/285 (10%) Query: 15 YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHS----------R 63 ++EL ++ ++ + V VR EI+ H Y L + Sbjct: 28 LELAELLDYVGQVIARGVPGGVWVRAEIASLTDRR---HLYLDLVQAGEGGAGGVGEVAK 84 Query: 64 IDAIIW---------KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS-GS 113 A +W K G++ L+ G F + + + P Sbjct: 85 CRATVWARERFALEAKFRGATSGATLSAGLKVLLFGTAE-FHPQYGFSFNVLDISPEYTL 143 Query: 114 GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR---ISCRF 170 G LE + +L+ EG + P+P +AVI A + D + + Sbjct: 144 GDAALRLEAMRAELVAEGSYGLNRLLPVPTDFARVAVIAPREAAGLGDFRREADPLEAAG 203 Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 + QG E + A+ L + + D + + RGGG++ DL ND Sbjct: 204 LVEFHYLEATFQGREAGASLLRAVAAARELHQEKA---LDALFVIRGGGAVTDLAWLNDL 260 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275 + RA+A P+++ +GH D TL D A LR TP+ AA V Sbjct: 261 ELARALATFPAPVVTGLGHARDDTLPDEVACLRTDTPSKAAAYLV 305 Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 19/54 (35%) Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 R + TL RGY ++D +T+ + + + DG V Sbjct: 362 LMRQALGLTPQRTLARGYALVRDAAGQPVTRAAGARAGEPLTLEWSDGSVPVRV 415 >gi|2367603|gb|AAB69700.1| unknown [Helicobacter pylori] Length = 82 Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats. Identities = 33/79 (41%), Positives = 50/79 (63%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTL 73 SVSE++ +K ++E+ V V+GE+S SGHAYFSLKD+ S I +++KG Sbjct: 4 VLSVSEINAQIKALLETTFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIKCVLFKGNA 63 Query: 74 NKIEFLPEEGIEFLVIGKI 92 N+++F +EG E +V G I Sbjct: 64 NRLKFALKEGQEMVVFGGI 82 >gi|94984256|ref|YP_603620.1| exodeoxyribonuclease VII large subunit [Deinococcus geothermalis DSM 11300] gi|94554537|gb|ABF44451.1| Exodeoxyribonuclease VII [Deinococcus geothermalis DSM 11300] Length = 413 Score = 118 bits (295), Expect = 3e-24, Method: Composition-based stats. Identities = 69/369 (18%), Positives = 130/369 (35%), Gaps = 30/369 (8%) Query: 23 HLKHIVESNLS-HVCVRGEISGYRGIHSSGHAYFSLK---D--NHSRIDAIIWKGTLNKI 76 ++ ++ + V VR E++ H Y L D ++ A +W + Sbjct: 27 YVGQVIARGVPGAVWVRAEVASLTDRR---HLYLDLVQLEDGVEVAKCRATVWARERFAL 83 Query: 77 --EFL-------PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSG-SGTLLTALEKRKKK 126 +F G++ L+ F + + + + P G L+ ++ Sbjct: 84 EGKFRRATGGGSLTAGLKVLLFCTAE-FHPQYGFSLNVLDVAPEFTLGDAALKLDALRET 142 Query: 127 LLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR---ISCRFPLRVIIFPVKVQG 183 L EG++ P P +AVI+ A + D + + +R + QG Sbjct: 143 LTREGVYGLNRTLPAPTDFVRVAVISPAEAAGLGDFRRETDALEAAGIVRFLYLEATFQG 202 Query: 184 DECPKEIANAILQLNTLKEGRTCPRP-DIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 E ++ A+ E T P D +++ RGGG++ DL ND + RA+A +P Sbjct: 203 REASASLSGAVAAARAAHEAETLGGPLDALVVIRGGGAVTDLAWLNDLAVARALATFPVP 262 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 +I+ +GH D TL D A +R TP+ AA + V + + + Sbjct: 263 VITGLGHARDDTLLDEMACIRTDTPSKAAALIVRTVMAAAAQAQEDIRTIRAHARNTLVN 322 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 L D+ L +R + D + + + + + D Sbjct: 323 AEAGARWL------LDRLLGSARRQTDAAQAQTDALMRQTLGLTPERTLARGYVLVRDAQ 376 Query: 363 IHNIQKNRQ 371 + + Q Sbjct: 377 GQPVTRAAQ 385 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 39/117 (33%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 R + + + +R +N + + L+ R+ + + R Sbjct: 296 RTVMAAAAQAQEDIRTIRAHARNTLVNAEAGARWLLDRLLGSARRQTDAAQAQTDALMRQ 355 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + TL RGY ++D +T+ + + + F DGQA P + Sbjct: 356 TLGLTPERTLARGYVLVRDAQGQPVTRAAQVDGGQILTLEFADGQAEVRAERTDPQR 412 >gi|308446580|ref|XP_003087215.1| hypothetical protein CRE_21712 [Caenorhabditis remanei] gi|308259572|gb|EFP03525.1| hypothetical protein CRE_21712 [Caenorhabditis remanei] Length = 389 Score = 116 bits (291), Expect = 8e-24, Method: Composition-based stats. Identities = 73/386 (18%), Positives = 142/386 (36%), Gaps = 15/386 (3%) Query: 76 IEFLPEEGIE------FLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLL 128 ++F E G+E L+ K F + + IE++ S G + ++ ++L Sbjct: 3 LKFERESGVELSRDLNVLIKVKA-VFSPQYGFSVNIEAIDSSYTLGDIARRYQQILERLT 61 Query: 129 EEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDE 185 EGL + P PF + + VI A + D + + QG+ Sbjct: 62 SEGLLNKNKLLPTPFDIQNVLVIAPENAAGLGDFKKDADALDQAGVCHFVYHTATFQGNT 121 Query: 186 CPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIIS 245 I+ A+ PD+I++ RGGG++ DL + ND + + S+PI Sbjct: 122 AATSISEALANALRQWAKDLNTPPDLIVIIRGGGAVNDLAYLNDYNLAALLCKRSVPIWV 181 Query: 246 AIGHETDWTLADYAADLRAPTPTGAA-EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 IGHE D T+ D A+ TP+ + + E Q L +L ++ Y+ Sbjct: 182 GIGHEKDRTILDEVANRSFDTPSKVIGGIRNLIVERTQDVLDSLHKIKLLSQHQITAYQS 241 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + S ++ + LD + +++ + +I ++ H Sbjct: 242 QNDQYIKVIKTLSQGQINEANKSLDLMKGTVQYLAQQLIKLASNQVESLMRETLLQNPRH 301 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + K + + I I + +I + + +L++ + I L+ Sbjct: 302 VMAKGYAIVRSDGKAIRSIQQISTDHI--QVELLDEGYDVLKKNAELLESQEEPDIDNLM 359 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQ 450 +E +S K+C + V + L Sbjct: 360 KIVEESMSAY-KACKSRVDAVQQALN 384 Score = 64.0 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 45/121 (37%), Gaps = 2/121 (1%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + +I I + + + +++ ++ +I + + + ++++ Sbjct: 216 ERTQDVLDSLHKIKLLSQHQITAYQSQNDQYIKVIKTLSQGQINEANKSLDLMKGTVQYL 275 Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 IK V R ++ + +GY ++ ++ I + ++T I + Sbjct: 276 AQQLIKLASNQVESLMRETLLQNPRHVMAKGYAIVR-SDGKAIRSIQQIST-DHIQVELL 333 Query: 491 D 491 D Sbjct: 334 D 334 >gi|160902472|ref|YP_001568053.1| exonuclease VII large subunit [Petrotoga mobilis SJ95] gi|160360116|gb|ABX31730.1| Exonuclease VII large subunit [Petrotoga mobilis SJ95] Length = 467 Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats. Identities = 85/419 (20%), Positives = 153/419 (36%), Gaps = 57/419 (13%) Query: 89 IGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP-KI 147 G + + +KY + S+IP G+ + ++ +KL + L I P K Sbjct: 99 QGVVNFWKREAKYVVSGSSIIPLGASEIEKKKKEILEKLEKSNLLRKVEHELIELDPIKK 158 Query: 148 IAVITSPTGAVIRDILQRISCRFPLRVI-IFPVKVQGDECPKEIANAILQLNTLKEGRTC 206 IAVITSPT A D + I+ + ++ ++P +QG E I A+ + + Sbjct: 159 IAVITSPTAAGFGDFQKNINHSRFIPIVHLYPAPMQGAETVPGIKKALFAILK-----SG 213 Query: 207 PRPDIIILARGGGSIEDLWHFNDEMIVR--AIANSSIPIISAIGHETDWTLADYAADLRA 264 D++++ RGGGS DL +F+D + A N IP+++ IGHE D T+ D+ + Sbjct: 214 IDYDVVVIIRGGGSKSDLMYFDDFELGSLIAKFNRKIPVLTGIGHEQDSTIPDFVSWKNY 273 Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 TPT + V + +L LE + + Sbjct: 274 STPTEVSRDIVNQINYFTDNLETLEKNITYSFTNV------------------------Y 309 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 + L +N++ + R ++ + D L NI + ++E + Sbjct: 310 YQMENLLSFNTINNIKYYLSR---ELINLFRTLDEDHL--NITRKVNQMIESSE------ 358 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 K + L ++ + I + +I I L K + + Sbjct: 359 ----------KSISLNKLDYIQRFIEYSIKTYNQNIISTTNEIVSELKSKFEVSERLLFS 408 Query: 445 TTRILQSFAY-KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 T + L + L G + I L TK + + F DG+A + + Sbjct: 409 TFQELTKSSPFAAFLNNG--VLVKKGEEIIDSVEKLQTKDEVKLIFKDGEAESSIEKIQ 465 >gi|226357347|ref|YP_002787087.1| exodeoxyribonuclease VII large subunit [Deinococcus deserti VCD115] gi|226319337|gb|ACO47333.1| putative Exodeoxyribonuclease VII large subunit [Deinococcus deserti VCD115] Length = 402 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 68/360 (18%), Positives = 122/360 (33%), Gaps = 28/360 (7%) Query: 1 MNPFSQKNSLDHPE---YSVSELSYHLKHIVESNLSH-VCVRGEISGYRGIHSSGHAYFS 56 M +K P ++++ ++ ++ + V VR E+ H Y Sbjct: 1 MTGRKRKKDTARPPEQFLELADVLTYVGQVIARGVPGGVWVRAELVSVTDRR---HLYLD 57 Query: 57 LK---D--NHSRIDAIIWKGTLNKI--EFL------PEEGIEFLVIGKITTFPGSSKYQI 103 L D +R A IW + +F G++ L+ F + + Sbjct: 58 LVQLEDGVEVARCRATIWARERFSLEGKFRKATGGTLTAGVKVLLFCTAE-FHAQYGFSL 116 Query: 104 IIESLIPSG-SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDI 162 + + P G L ++ LL EG++ P P +AVI A + D Sbjct: 117 NVIDIAPEFTLGDAALKLGALRQALLLEGVYGLNRLLPAPSDFTRVAVIAPVEAAGLGDF 176 Query: 163 LQR---ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 + + +R QG E + A+ Q ++ D +++ RGGG Sbjct: 177 RREADALEAAGLVRFEYLEATFQGREASASLTRAVEQARSMHVQEP---LDALVVIRGGG 233 Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 ++ DL ND RA+A P+I+ +GH D TL D A +R TP+ AA + V Sbjct: 234 AVTDLAWLNDLDFARALATFPAPVITGLGHARDDTLPDEVASIRTDTPSKAAALIVRTVV 293 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 + + +L+ + + + + L Sbjct: 294 QAAAQAQEDARTIRAHATQLLLDADAGATWAVDRAVQAARRATDHAQAQTDALMRQALGL 353 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 27/109 (24%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 R + + +R + + R R Sbjct: 290 RTVVQAAAQAQEDARTIRAHATQLLLDADAGATWAVDRAVQAARRATDHAQAQTDALMRQ 349 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 TL RGY ++D + +T+ + + + F DG Sbjct: 350 ALGLTPARTLARGYALVRDADGQPVTRAAQVGEAQDLTLEFHDGAVQVR 398 >gi|262368417|ref|ZP_06061746.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046] gi|262316095|gb|EEY97133.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046] Length = 329 Score = 113 bits (282), Expect = 9e-23, Method: Composition-based stats. Identities = 51/305 (16%), Positives = 109/305 (35%), Gaps = 8/305 (2%) Query: 86 FLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144 V K F + + +E + S G + ++ ++L EGL + P PF Sbjct: 2 VKVRAK---FDPQYGFSVNVEDIDSSYTLGDIARRYQQILERLTSEGLLNKNKLIPTPFD 58 Query: 145 PKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLK 201 + + VI A + D + + QG+ + I ++ Sbjct: 59 IQNVLVIAPENAAGLGDFKKDADALEKSGVCHFKYYSATFQGNTAAQSIITSLSNGLREW 118 Query: 202 EGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAAD 261 PD+I++ RGGG++ DL + ND + +A ++PI IGHE D T+ D A+ Sbjct: 119 ATDFNTPPDLIVIIRGGGAVNDLAYLNDYELAALLAKRTVPIWVGIGHEKDRTILDEVAN 178 Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ-T 320 TP+ + +++ + + I + + ++ + Sbjct: 179 RSFDTPSKVIGGIRNLIADRTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQ 238 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++ + +D + L + + I ++ + + K + + + I Sbjct: 239 INEANKSVDLMRSTLHYLAQQQIKLATNQVESLMRETLIQNPRNVMAKGYGIVRNEGKAI 298 Query: 381 EQIVK 385 I + Sbjct: 299 RSIQQ 303 Score = 80.2 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 46/132 (34%), Gaps = 6/132 (4%) Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 + + I I + + + M++ +I + + + + + ++ Sbjct: 198 RTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRMIKTLAHGQINEANKSVDLMRSTLHYLA 257 Query: 432 SHKIKSCHTSVSITTRILQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 +IK V R ++ +N + +GY +++ I + ++ ++ + Sbjct: 258 QQQIKLATNQVESLMR--ETLIQNPRNVMAKGYGIVRNE-GKAIRSIQQIS-GDKVQVEL 313 Query: 490 FDGQANAIVINK 501 DG A V Sbjct: 314 QDGTIQANVTKV 325 >gi|262371556|ref|ZP_06064863.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046] gi|262313513|gb|EEY94573.1| exonuclease VII, large subunit [Acinetobacter johnsonii SH046] Length = 329 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 54/316 (17%), Positives = 112/316 (35%), Gaps = 8/316 (2%) Query: 86 FLVIGKITTFPGSSKYQIIIESLIPS-GSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFI 144 V K F + + +E + S G + ++ ++L EGL + P PF Sbjct: 2 VKVRAK---FDPQYGFSVNVEDIDSSYTLGDIARHYQQILERLTSEGLLNKNKLVPTPFD 58 Query: 145 PKIIAVITSPTGAVIRDIL---QRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLK 201 + + VI A + D + + QG+ + I ++ Sbjct: 59 IQNVLVIAPENAAGLGDFKKDADALEKSDVCHFKYYSATFQGNTAAQSIITSLSNGLRQW 118 Query: 202 EGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAAD 261 PD+I++ RGGG++ DL + ND + +A ++PI IGHE D T+ D A+ Sbjct: 119 ATDFNTPPDLIVIIRGGGAVNDLAYLNDYELAALLAKRTVPIWVGIGHEKDRTILDEVAN 178 Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ-T 320 TP+ + +++ + + I + + ++ + Sbjct: 179 RSFDTPSKVISGIRNLIAERTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRVIKTLAHGQ 238 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++ + +D L L + + I ++ + K + + + I Sbjct: 239 INEANKSVDLLRSTLHYLAQQQIKLATNQVESLLRETLIQNPRTVMAKGYGIVRSEGKAI 298 Query: 381 EQIVKQHLRYIFLEKK 396 I + I +E + Sbjct: 299 RSIQQISGDSIQVELQ 314 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 44/133 (33%), Gaps = 6/133 (4%) Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + I I + + + +++ +I + + L + + ++ Sbjct: 197 ERTQDVLDSFQTIKLLSQHQITAYQSQNDQYMRVIKTLAHGQINEANKSVDLLRSTLHYL 256 Query: 431 LSHKIKSCHTSVSITTRILQSF--AYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 +IK V R ++ + + +GY ++ I + ++ I + Sbjct: 257 AQQQIKLATNQVESLLR--ETLIQNPRTVMAKGYGIVRSE-GKAIRSIQQIS-GDSIQVE 312 Query: 489 FFDGQANAIVINK 501 DG A V Sbjct: 313 LQDGTIQANVTKV 325 >gi|311114366|ref|YP_003985587.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC 14019] gi|310945860|gb|ADP38564.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC 14019] Length = 208 Score = 112 bits (281), Expect = 1e-22, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 5/166 (3%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHS-SGHAYFSLKDNH 61 P ++ + VS +S VE V G+I S SG Y +L+D++ Sbjct: 41 PLKAADTTAENPWPVSVISQKFHGAVEK-WPAAWVEGQIVEINMRRSTSG--YITLRDSN 97 Query: 62 SRID-AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 I +I+ + +G +V GK + +++ + + + G+G L + Sbjct: 98 EDISISIMGFSKFVQQSKDLRQGDRVVVHGKADIWVKATRLSFVADEIRRVGAGDLKAQI 157 Query: 121 EKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRI 166 ++ +KKL EGLF ++K P+P PK I ++ +P +LQ Sbjct: 158 DELRKKLKGEGLFDVENKVPLPEFPKCIGLVCAPQARARGMLLQTS 203 >gi|218658557|ref|ZP_03514487.1| exodeoxyribonuclease VII large subunit [Rhizobium etli IE4771] Length = 158 Score = 111 bits (278), Expect = 3e-22, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 3/161 (1%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ + E+ E+ V++ L AIL L + K + + L + Sbjct: 1 RRQTLNERMARAERTVERLLDRSKSRIDRAEAILASLPARLKTQTDRGRERLGNLTRHAD 60 Query: 429 FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 + H++ +S R+LQS +YKN LKRGY I+D ++ ++Q L+ T I I Sbjct: 61 TAIRHQLTRARAELSAQDRVLQSLSYKNVLKRGYAVIRDEDDRPVSQAATLSAGTGIAIE 120 Query: 489 FFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 F DG+ A+ P K + ++ R + G LF Sbjct: 121 FADGRVGAMTTESGAPPAGAKKAQRQNSQSRRSK---GSLF 158 >gi|322387925|ref|ZP_08061532.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC 700779] gi|321141198|gb|EFX36696.1| exodeoxyribonuclease VII large subunit [Streptococcus infantis ATCC 700779] Length = 237 Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats. Identities = 53/281 (18%), Positives = 101/281 (35%), Gaps = 45/281 (16%) Query: 225 WHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSS 284 FN+E++VR+I S +PIIS++GHETD TLAD+ AD RA TPT AAE+A PV + + Sbjct: 1 MAFNEEIVVRSIFESRLPIISSVGHETDVTLADFVADKRAATPTAAAELATPVTKLDLLT 60 Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 L + + ++ + Sbjct: 61 Y------------------------------------------LKNQEKRMATAVQNTLS 78 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 +K + + Q + + ++Q + L + + +I L Sbjct: 79 KKKEALRGLSQSVIFRQPERLYDGYLQRLDQLVLRLKQGLNGELVRNQQKVQAQIHRLEQ 138 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTS 464 L +I I++L + ++ + V + L + RGY Sbjct: 139 L--SPNVKIQRYQDRIQQLQKLMRSQMAVIYDAKVAEVKRLSEALLMLDTSRIVARGYAI 196 Query: 465 IQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 ++ + ++ +L ++++ DG V + + Sbjct: 197 VKKED-TVVSSANDLKKNDQVMLMMRDGHVELEVKDVKTEE 236 >gi|311114367|ref|YP_003985588.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC 14019] gi|310945861|gb|ADP38565.1| exodeoxyribonuclease VII large subunit [Gardnerella vaginalis ATCC 14019] Length = 258 Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 11/222 (4%) Query: 150 VITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPR 208 + S + D++ ++ R+P+ R + VQG +CP ++ AI QL+ P Sbjct: 1 MCASSSRQG--DVITNVNLRWPVTRFKVVHAHVQGVQCPADVIAAIKQLDA------DPE 52 Query: 209 PDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPT 268 D+II+ARGGGS EDL F+DE +VRA A PI+SAIGHE DWTL D AAD+RA TPT Sbjct: 53 VDVIIVARGGGSFEDLIGFSDEGVVRATAACVTPIVSAIGHEDDWTLIDLAADMRASTPT 112 Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA--LPNSDQTLSCSRY 326 AA+ VP + N I + +I + L L Sbjct: 113 DAAKRVVPDVNEQWQLIDNALQHARMRISARVSNEIQLIEGYANRPSLTRPSTMLEPHEL 172 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + H L ++ I + + + Sbjct: 173 FVQQAVERMRHGLVRLLDDASLTVEKAHASITALSPQSTLNR 214 Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 53/166 (31%), Gaps = 5/166 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL- 402 + +++ ++ + E+ Q I+ ++ I +I ++ Sbjct: 93 HEDDWTLIDLAADMRASTPTDAAKRVVPDVNEQWQLIDNALQHARMRISARVSNEIQLIE 152 Query: 403 ----HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + + +++ + R+ L + +V + + + ++TL Sbjct: 153 GYANRPSLTRPSTMLEPHELFVQQAVERMRHGLVRLLDDASLTVEKAHASITALSPQSTL 212 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 RGY +Q + + + T I + G A V + Sbjct: 213 NRGYAVVQISGGKVLDDSSRVKTGDDITVTLKSGLITASVTSVEKS 258 >gi|270610592|ref|ZP_06221683.1| exonuclease VII, large subunit [Haemophilus influenzae HK1212] gi|270318059|gb|EFA29322.1| exonuclease VII, large subunit [Haemophilus influenzae HK1212] Length = 154 Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 58/157 (36%), Gaps = 4/157 (2%) Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + + RK + + R+++ + ++ + + ++ + R ++ Sbjct: 1 MAFDRLFTRKSQRLKQLALRLQNQHPQNQLRAQQAKNEQLTHRLQLAML---RQFENTQQ 57 Query: 397 EKIAILHMLREQTKN-RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + A+ L++ RI +++L R+ F ++ ++ ++ L + Sbjct: 58 KFTALSVRLKQNPLPYRIQRYQQGLEQLKVRLNFCVNRQVTERQNKLATLCGKLDGLSPL 117 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG 492 L RGY+ ++ I +++ I DG Sbjct: 118 KVLARGYSIAENPQGKAIVSVKDVNQGDFITTQVADG 154 >gi|5306202|gb|AAD41967.1| exonuclease VII [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 124 Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 44/115 (38%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 R ++++ + ++ + RI + I++L R+ + ++ Sbjct: 8 RIKQANQRQQCVSQRLSQQNPQPRIHRAQSRIQQLEYRLTENIRSRLSEQRERFGNAVTH 67 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 L++ + TL RGYT T+ + + + + + DG + V + P Sbjct: 68 LEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 122 >gi|207093403|ref|ZP_03241190.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori HPKX_438_AG0C1] Length = 165 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 3/167 (1%) Query: 151 ITSPTGAVIRDILQRISCRFPL-RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209 ITS A D+ + S R+P+ ++ +QG+ C + + I ++ T Sbjct: 1 ITSQNSAAWADMKKIASKRWPMCELVCINTLMQGEGCVQSVVEGIAYADSFH--GTKNAF 58 Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 D I++ARGGGS+EDL+ FNDE I A+ + +SAIGHE+D+ L+D ADLRA TP+ Sbjct: 59 DAIVMARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTPSN 118 Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 A E+ +P + L +L+ L+ K L L +L Sbjct: 119 AMEILLPNSDEWLQRLDGFNVKLHRSFKILLHQKKAHLEHLAASLKR 165 >gi|330813631|ref|YP_004357870.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp. IMCC9063] gi|327486726|gb|AEA81131.1| exodeoxyribonuclease VII large subunit [Candidatus Pelagibacter sp. IMCC9063] Length = 247 Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 160 RDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGG 219 DI+ RI RF + +FP+ VQG + +EI + N D++I+ARGGG Sbjct: 1 MDIVDRIKNRFSTHLELFPISVQGAKSAEEIVLGVNFFN------NHSDVDLVIIARGGG 54 Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 ED FNDE +VRA+ S IPIISAIGHETD+TL D+ AD+RA TPT AAEMAVP Sbjct: 55 GAEDFLPFNDENVVRAVFQSKIPIISAIGHETDFTLLDFVADVRAATPTAAAEMAVPEMR 114 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDRLPRELEH 337 +LQ L +L L I + K L+ L K L + + + ++ L L + L++ Sbjct: 115 NLQRQLNDLFKNLKFTIELVFKSANEELHGLSKFLNKKSLENFIKDNKKTLLMLSKNLQY 174 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 +I K N+ R+ + + +++ Sbjct: 175 FAHNLIKEKNVKINNYFLRLDNLSIQKVLKR 205 Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 58/164 (35%), Gaps = 5/164 (3%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +++ + + Q+ + + K I L K LH Sbjct: 84 HETDFTLLDFVADVRAATPTAAAEMAVPEMRNLQRQLNDLFKNLKFTIELVFKSANEELH 143 Query: 404 -----MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + ++ +N I + L +++ + IK + ++ L + + + L Sbjct: 144 GLSKFLNKKSLENFIKDNKKTLLMLSKNLQYFAHNLIKEKNVKINNYFLRLDNLSIQKVL 203 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 KRG+ ++ + I + N+ + + I F DG A + K Sbjct: 204 KRGFAIVRGAKDKKIIKSSNVNKEHLVNIEFCDGVLTAKIQKKQ 247 >gi|213025445|ref|ZP_03339892.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 118 Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 45/115 (39%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 R ++++ + ++ + RI + + I++L R+ + ++ Sbjct: 2 RIKQATQRQQRVSQRLSQQNPQPRIHRVQSRIQQLEYRLTENIRSRLSEQRERFGNAVTH 61 Query: 449 LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 L++ + TL RGYT T+ + + + + + DG + V + P Sbjct: 62 LEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 116 >gi|33322690|gb|AAQ07079.1|AF496392_1 exodeoxyribonuclease large subunit [Lactobacillus delbrueckii subsp. lactis] Length = 146 Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 2/144 (1%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 ++ Q + + Q + Q+++ ++ + L + RI L Sbjct: 5 PQRLYEQKMQQVDQLSQQLSQMMEVIVKDQGQKLSLLTQRLQH--QAPDRRIKQLKQENS 62 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 L +E + ++ + + L ++ TL RGY+ D + N + + LA Sbjct: 63 YLAKSLEMGIKRILEQKQAACRQAVQQLDDYSPLKTLARGYSYTTDASGNVVKSVQQLAP 122 Query: 482 KTRILINFFDGQANAIVINKAPPK 505 ++ ++ DGQA + K Sbjct: 123 GDQVRLHLKDGQAIGRIEEIKEGK 146 >gi|294140152|ref|YP_003556130.1| hypothetical protein SVI_1381 [Shewanella violacea DSS12] gi|293326621|dbj|BAJ01352.1| hypothetical protein [Shewanella violacea DSS12] Length = 178 Score = 103 bits (257), Expect = 7e-20, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 74/163 (45%), Gaps = 2/163 (1%) Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + + N + +R++ +Q+ Q E Q ++ + + L + L++ Sbjct: 17 KQSWQHYQLKANSRMNTLTHRLQRQDPNRRLQQYGQSFDEMQFRLDAAIDKKLTSLALKQ 76 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 ++ L+ ++ N++ + L +R++ + K+ S +S+S++ LQ+ + Sbjct: 77 QQLSHRLN--QQSPANKLELESQRLSYLTSRLKDSIKEKLASSESSLSVSAHQLQTVSPL 134 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIV 498 TL RGY+ QD+ + + +++ + +G+ + V Sbjct: 135 ATLSRGYSITQDSKGKVLLKASDVSVGDMLTTRLLEGEVQSKV 177 >gi|330722416|gb|EGH00260.1| Exodeoxyribonuclease VII large subunit [gamma proteobacterium IMCC2047] Length = 166 Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 4/164 (2%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 ++ + R +HI R++ +Q+ Q + + + ++ + L+ + Sbjct: 1 MQRRLIEARRQLDHISKRLR--HPGQQLQEQAQRLDDMEARLKTAITSQLKLHSAQLATH 58 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 A L Q K+++ L+ ++L R++ + ++ + + + L + + TL Sbjct: 59 SATLEAC--QPKHQVARLNMTNQQLSQRLQRAMQQQLSALRQRLKGNSLALNTLSPLQTL 116 Query: 459 KRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 RGY I+D + L ++ GQ + V Sbjct: 117 GRGYAIIKDEQQQIVRNSEQLQIGDKVSAQLGKGQIHCAVEAIE 160 >gi|224437548|ref|ZP_03658506.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG 18818] Length = 113 Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 + +I+KG +K+ F +EG+ +V G ++ + +YQI ++P G G L ++ Sbjct: 1 MRCVIFKGNASKLRFQMQEGLNLIVRGSVSAYIPRGEYQINCLEVLPDGIGELSLTYQQL 60 Query: 124 KKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 K L G F ++ IP PK +AV+TS TGAVI DI + Sbjct: 61 KTSLQARGYFDNKKP--IPAFPKRVAVLTSITGAVIEDIKKS 100 >gi|269962403|ref|ZP_06176753.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832899|gb|EEZ87008.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 87 Score = 99.1 bits (245), Expect = 1e-18, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 39/86 (45%) Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + + + ++ ++ + K+ + ++I L + + TLKRGY+ Q Sbjct: 1 MAEQKSKLDRVEQKLLDAMDRKLLTMRHQLAIAAEKLDTVSPLATLKRGYSITQTEQGQV 60 Query: 473 ITQKRNLATKTRILINFFDGQANAIV 498 +TQ +++ T ++ DG+ + V Sbjct: 61 VTQAKDVKTGDVLVTRLSDGELRSTV 86 >gi|253576320|ref|ZP_04853650.1| exodeoxyribonuclease VII [Paenibacillus sp. oral taxon 786 str. D14] gi|251844213|gb|EES72231.1| exodeoxyribonuclease VII [Paenibacillus sp. oral taxon 786 str. D14] Length = 134 Score = 94.8 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 41/123 (33%), Gaps = 1/123 (0%) Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 R + +LR ++ + + ++ + + ++ + ++ Sbjct: 2 HMQTRLQLAGAAKDRLHQRLLRFHPRDALQFAGRRRREADRLLRQAMQGILREKSSQLAS 61 Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNN-NFITQKRNLATKTRILINFFDGQANAIVINKAP 503 R L + + + RGY+ + D I ++ RI + DG+ + V P Sbjct: 62 GIRHLDALSPLKVMARGYSLVYDERGERIIKSLSDVELGDRITVKVTDGELDCQVWGMRP 121 Query: 504 PKE 506 Sbjct: 122 EGA 124 >gi|218670477|ref|ZP_03520148.1| exodeoxyribonuclease VII large subunit [Rhizobium etli GR56] Length = 197 Score = 93.7 bits (231), Expect = 8e-17, Method: Composition-based stats. Identities = 74/197 (37%), Positives = 108/197 (54%) Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 +RA A S IP+ISA+GHETDWTL D+AAD+RAPTPTGAAEMAVPVK L++ L L ARL Sbjct: 1 MRAAAESRIPLISAVGHETDWTLIDFAADVRAPTPTGAAEMAVPVKAELEAQLAALAARL 60 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 + R + + ++ L++ALP+ DQ L+ R R D L LE+ K R F Sbjct: 61 QGCMSRQMDQRRQSVRGLMRALPSLDQLLALPRRRFDEAAAGLGRGLELNTVNKRRGFER 120 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + ++ D L + I + RQ + E+ E++V++ + + AIL L + K + Sbjct: 121 VAAHLRPDVLSNRIAERRQRLNERMVRAERMVERLIDRSTSRVQRAEAILASLPARLKTQ 180 Query: 413 IFYLHTHIKKLITRIEF 429 + L + Sbjct: 181 TDRSRERLGNLSRHADT 197 >gi|284800114|ref|ZP_06390543.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703] gi|284795978|gb|EFC51325.1| exodeoxyribonuclease VII, large subunit [Neisseria subflava NJ9703] Length = 122 Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 42/109 (38%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + + + + +I + T + + S+ +L++ + ++ Sbjct: 11 RFERQTQTLKHCRPDVSIYKHNIDRFQTALSHSFRQLLVQRCQSLIAQAALLEAVSPQHI 70 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 L+RG++ +++T I L ++ I F DG+ + V + E Sbjct: 71 LERGFSVVKNTRGQVIRNADTLKQGQKLHITFADGETDVRVTKEQAQGE 119 >gi|296537082|ref|ZP_06899053.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC 49957] gi|296262591|gb|EFH09245.1| exodeoxyribonuclease VII large subunit [Roseomonas cervicalis ATCC 49957] Length = 172 Score = 90.6 bits (223), Expect = 6e-16, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 25/163 (15%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ + ++ + + R + K+ + + + + + L R Sbjct: 14 ARQRLDDRAERLA----MAPRALLSAKRAALDAIAPRLPHPRESLAGHRHSLALLQQRGA 69 Query: 429 FILSHKIKS---------------------CHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 L ++ T + L+ +Y+ L RG+ ++ Sbjct: 70 AALQRQLDRSQTALHRLPDPRTRLESRLREARTRLEGLAFRLEGASYQGVLARGFALVRA 129 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTK 510 + +T +A R+ + F DG + AP P + Sbjct: 130 ESGEPVTSAAGIAAGARLSLTFQDGARMVTADDTAPGPAAPPR 172 >gi|224437549|ref|ZP_03658507.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG 18818] Length = 172 Score = 89.8 bits (221), Expect = 1e-15, Method: Composition-based stats. Identities = 54/142 (38%), Positives = 79/142 (55%), Gaps = 2/142 (1%) Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 VQG++ + IA I +++ T D+II+ RGGGS+EDLW FN+E++ AI Sbjct: 3 NTLVQGEKAKESIATNIAYIDSFF--GTPKGFDVIIIGRGGGSMEDLWAFNEEIVADAIY 60 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 N+ IPIISA+GHE+D ++DY AD+RAPTP+ A EM +P L + + N I Sbjct: 61 NARIPIISAVGHESDTVISDYVADMRAPTPSAAIEMLLPAPNALTQGITHRFECATNDIK 120 Query: 298 RLIKYKINTLNSLLKALPNSDQ 319 +L L A ++ Sbjct: 121 QLCNAINARDPQRLGAFVQIEK 142 >gi|299532331|ref|ZP_07045723.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni S44] gi|298719569|gb|EFI60534.1| exodeoxyribonuclease VII, large subunit [Comamonas testosteroni S44] Length = 209 Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 4/148 (2%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 ++ + + + + Q + Q + + +Q R ++ LR + Sbjct: 62 LMQDRLDNAVQRVLDRQAQRLDIAAQRLGRPSEQLARNQLQLSRQ----AQRLRHSMLLK 117 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + L + + I ++ ++ LQ + L+RGY + D Sbjct: 118 LQRLAQSQQAIQVSFPNIFQRSLEQQRQTLDRIDLRLQLLDPRLVLQRGYALLTDQQGRP 177 Query: 473 ITQKRNLATKTRILINFFDGQANAIVIN 500 +TQ R T + DG + +V Sbjct: 178 VTQVRQAVPGTALKAQLSDGAVDVVVTQ 205 Score = 77.1 bits (188), Expect = 6e-12, Method: Composition-based stats. Identities = 47/158 (29%), Positives = 85/158 (53%), Gaps = 1/158 (0%) Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285 FNDE + R I S +P+IS +GHETD+T+AD+ ADLRAPTPT AAE+ +E +L Sbjct: 1 AFNDEQLARTIVQSPVPLISGVGHETDFTIADFCADLRAPTPTAAAELVAQPREVWLGAL 60 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 ++ RL+N + R++ + L+ + L + L+ ++ +L R + L H++ + + R Sbjct: 61 GLMQDRLDNAVQRVLDRQAQRLDIAAQRLGRPSEQLARNQLQLSRQAQRLRHSMLLKLQR 120 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 I + ++++ RQ + ++ + Sbjct: 121 -LAQSQQAIQVSFPNIFQRSLEQQRQTLDRIDLRLQLL 157 >gi|313144002|ref|ZP_07806195.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG 18818] gi|313129033|gb|EFR46650.1| exodeoxyribonuclease VII large subunit [Helicobacter cinaedi CCUG 18818] Length = 167 Score = 87.9 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 2/139 (1%) Query: 181 VQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSS 240 +QG++ + IA I +++ T D+II+ RGGGS+EDLW FN+E++ AI N+ Sbjct: 1 MQGEKAKESIATNIAYIDSFF--GTPKGFDVIIIGRGGGSMEDLWAFNEEIVADAIYNAR 58 Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 IPIISA+GHE+D ++DY AD+RAPTP+ A EM +P L + + N I +L Sbjct: 59 IPIISAVGHESDTVISDYVADMRAPTPSAAIEMLLPAPNALTQGITHRFECATNDIKQLC 118 Query: 301 KYKINTLNSLLKALPNSDQ 319 L A ++ Sbjct: 119 NAINARDPQRLGAFVQIEK 137 >gi|167580077|ref|ZP_02372951.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis TXDOH] Length = 156 Score = 87.5 bits (215), Expect = 6e-15, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 58/147 (39%), Gaps = 4/147 (2%) Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF---LEKKEKIAILHMLREQTKNRIFYLH 417 +L + + + + H+ Q+ + + + + A++ + ++ + + Sbjct: 4 WLARRLISPAERLQRQSMHVGQLAARLAAAGARPVRDARARFALVQLRWQRARPDVAPAR 63 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY-TSIQDTNNNFITQK 476 + L R++ L +++ V+ L+ + + TL+RGY I + Sbjct: 64 QVLATLAQRLDATLRRRVERDTARVAACAARLEVLSPQRTLERGYAALIDTQTGRAVRAP 123 Query: 477 RNLATKTRILINFFDGQANAIVINKAP 503 L + R+ ++ +G A+ + + P Sbjct: 124 AALKPQRRLTVHLAEGSADVSLADVQP 150 >gi|270690417|ref|ZP_06222894.1| Exonuclease VII, large subunit [Haemophilus influenzae HK1212] gi|270316108|gb|EFA28111.1| Exonuclease VII, large subunit [Haemophilus influenzae HK1212] Length = 146 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 2/140 (1%) Query: 213 ILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272 I+ RGGGS+EDLW FN+E + RAI S++PIISA+GHETD T+AD+ ADLRAPTP+ AAE Sbjct: 1 IVGRGGGSLEDLWCFNEEDVARAIFRSTLPIISAVGHETDVTIADFVADLRAPTPSAAAE 60 Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL--PNSDQTLSCSRYRLDR 330 + ++ L L + + RL+ RL K L L L + L + + ++ Sbjct: 61 LVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLKQLALRLQNQHPQNQLRAQQAKNEQ 120 Query: 331 LPRELEHNLEIIIFRKYRHF 350 L L+ + + F Sbjct: 121 LTHRLQLAMLRQFENTQQKF 140 >gi|167569042|ref|ZP_02361916.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis C6786] Length = 124 Score = 86.3 bits (212), Expect = 1e-14, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 48/115 (41%), Gaps = 1/115 (0%) Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + A++ + ++ + + + L R++ L + + V+ L Sbjct: 4 RPVRDARARFALVQLRWQRARPDLTQARQMLATLAQRLDTALQRRHERDAARVTACAARL 63 Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + TL+RGY ++ D + L + R+ ++ +G A+ + + P Sbjct: 64 EVLSPRRTLERGYAALIDAQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 118 >gi|148530039|gb|ABQ82227.1| exodeoxyribonuclease VII large subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 157 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 8/160 (5%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L ++ + +R+ ++ + ++ + R L Sbjct: 3 LPSLLGTARMRLDDRGHRLDMALPALVARRRAALLSVERAMPSASLLTGPRRARL----- 57 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNT 457 L Q+ R H + TR+ L+ ++ ++ L+S + Sbjct: 58 --ALAASHLQSGLRQALRDGHARADRTRLRPAPLAAMLRERRAHLAGLAGRLESLSPMAV 115 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 L+RGY ++D +T+ ++ R+++ F DG+A Sbjct: 116 LERGYVLVRDPAGVPVTRAADVRPGGRLVLIFADGEAAVR 155 >gi|256026618|ref|ZP_05440452.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11] gi|289764618|ref|ZP_06523996.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11] gi|289716173|gb|EFD80185.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11] Length = 66 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 12 HPEYSVSELSYHLKHIVES--NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 YSVSE + +K ++ + + GEIS + SGH YFS+KD+ S+I + Sbjct: 2 EKIYSVSEFNRMVKSYIDDIDDFQEFFIEGEISNIT-YYKSGHLYFSIKDSKSQIKCAAF 60 Query: 70 KGTLNK 75 L + Sbjct: 61 NYKLKR 66 >gi|167909839|ref|ZP_02496930.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 112] Length = 124 Score = 85.6 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%) Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + +++ + ++ + + R++ L +++ V+ L Sbjct: 4 RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARL 63 Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + TL+RGY ++ D + +L + R+ ++ +G A+ + + P Sbjct: 64 EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 118 >gi|167917865|ref|ZP_02504956.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei BCC215] Length = 129 Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%) Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + +++ + ++ + + R++ L +++ V+ L Sbjct: 9 RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARL 68 Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + TL+RGY ++ D + +L + R+ ++ +G A+ + + P Sbjct: 69 EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 123 >gi|167618143|ref|ZP_02386774.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis Bt4] Length = 114 Score = 85.2 bits (209), Expect = 3e-14, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 45/107 (42%), Gaps = 1/107 (0%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 + A++ + ++ + + + L R++ L +++ V+ L+ + + T Sbjct: 2 RFALVQLRWQRARPDVAPARQVLATLAQRLDATLRRRVERDTARVAACAARLEVLSPQRT 61 Query: 458 LKRGY-TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 L+RGY I + L + R+ ++ +G A+ + + P Sbjct: 62 LERGYAALIDTQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 108 >gi|167823047|ref|ZP_02454518.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 9] Length = 125 Score = 84.8 bits (208), Expect = 3e-14, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 47/115 (40%), Gaps = 1/115 (0%) Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + +++ + ++ + + R++ L +++ V+ L Sbjct: 5 RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARL 64 Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + TL+RGY ++ D + +L + R+ ++ +G A+ + P Sbjct: 65 EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSFADVQP 119 >gi|167737458|ref|ZP_02410232.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 14] gi|167844609|ref|ZP_02470117.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei B7210] Length = 121 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 48/115 (41%), Gaps = 1/115 (0%) Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + +++ + ++ + + R++ L +I+ V+ L Sbjct: 1 RPVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRIERDTARVAACAARL 60 Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + TL+RGY ++ D + +L + R+ ++ +G A+ + + P Sbjct: 61 EVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 115 >gi|167947994|ref|ZP_02535068.1| exodeoxyribonuclease VII, large subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 73 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 9/70 (12%), Positives = 26/70 (37%) Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +++ ++ R L + + TL+RG+ + + + + +I Sbjct: 1 MESRLEQAQGRLAQFARDLHNLSPLTTLERGFAIVSSEDGTILRDAAKVTVGDQIETRLA 60 Query: 491 DGQANAIVIN 500 G+ V+ Sbjct: 61 RGRLRCRVLE 70 >gi|167718409|ref|ZP_02401645.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei DM98] Length = 115 Score = 84.4 bits (207), Expect = 4e-14, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + + +++ + ++ + + R++ L +I+ V+ L+ + + Sbjct: 1 RARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRIERDTARVAACAARLEVLSPQ 60 Query: 456 NTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 TL+RGY ++ D + +L + R+ ++ +G A+ + + P Sbjct: 61 RTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 109 >gi|229025642|ref|ZP_04182048.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272] gi|228735640|gb|EEL86229.1| Exodeoxyribonuclease 7 large subunit [Bacillus cereus AH1272] Length = 88 Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats. Identities = 8/80 (10%), Positives = 31/80 (38%) Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 + +++ + ++ + + L++ + + RGY + D + ++++ Sbjct: 1 MQKQLQREMQTLLQMKEFAFVRAAQKLEALSPLKVMMRGYGLVYDEEKQVLKSVKDVSLG 60 Query: 483 TRILINFFDGQANAIVINKA 502 + + DG + V + Sbjct: 61 DAVSVQLQDGILDCSVSSIE 80 >gi|167814576|ref|ZP_02446256.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei 91] Length = 117 Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 + +++ + ++ + + R++ L +++ V+ L+ + Sbjct: 2 RARVFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAARLEVLSP 61 Query: 455 KNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + TL+RGY ++ D + +L + R+ ++ +G A+ + + P Sbjct: 62 QRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 111 >gi|167905704|ref|ZP_02492909.1| exodeoxyribonuclease VII large subunit [Burkholderia pseudomallei NCTC 13177] Length = 123 Score = 83.7 bits (205), Expect = 6e-14, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 50/117 (42%), Gaps = 1/117 (0%) Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 +R + + + +++ + ++ + + R++ L +++ V+ Sbjct: 1 MRAAVRDARARFSLVQLRWQRARPDFAQARQVLAAFAQRLDATLQRRLERDTARVAACAA 60 Query: 448 ILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 L+ + + TL+RGY ++ D + +L + R+ ++ +G A+ + + P Sbjct: 61 RLEVLSPQRTLERGYAALIDAQTGRAVRAPASLKPQRRLTVHLAEGSADVSLADVQP 117 >gi|58578690|ref|YP_196902.1| hypothetical protein ERWE_CDS_00260 [Ehrlichia ruminantium str. Welgevonden] gi|58616752|ref|YP_195951.1| hypothetical protein ERGA_CDS_00250 [Ehrlichia ruminantium str. Gardel] gi|58416364|emb|CAI27477.1| Truncated exodeoxyribonuclease large subunit [Ehrlichia ruminantium str. Gardel] gi|58417316|emb|CAI26520.1| Truncated exodeoxyribonuclease large subunit [Ehrlichia ruminantium str. Welgevonden] Length = 68 Score = 83.7 bits (205), Expect = 8e-14, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Query: 15 YSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 ++VSE++ +++V +H+ VRGEIS SGH YF+LKD+ + ++A+ W Sbjct: 5 FTVSEITKIFQNLVHETFNHIKVRGEISNL-SQPKSGHTYFTLKDHQAVLNAVCWNN 60 >gi|221205878|ref|ZP_03578893.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD2] gi|221174716|gb|EEE07148.1| exodeoxyribonuclease VII, large subunit [Burkholderia multivorans CGD2] Length = 129 Score = 83.3 bits (204), Expect = 9e-14, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 46/115 (40%), Gaps = 1/115 (0%) Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + A+ + ++ + + + L R+ L + + V+ L Sbjct: 9 RPVRDARARFALAQLRWQRARPDPAHARHVLAGLSQRLAVALQRRHERDTARVAACAARL 68 Query: 450 QSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + + TL+RGY ++ D + L + R+ ++ +G A+ + + P Sbjct: 69 EVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGSADVSLADVQP 123 >gi|58578689|ref|YP_196901.1| hypothetical protein ERWE_CDS_00250 [Ehrlichia ruminantium str. Welgevonden] gi|58417315|emb|CAI26519.1| Hypothetical protein ERWE_CDS_00250 [Ehrlichia ruminantium str. Welgevonden] Length = 68 Score = 82.9 bits (203), Expect = 1e-13, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG 71 E++VSE++ +++V +H+ VRGEIS SGH YF+LKD+ + +A+ W Sbjct: 4 EFTVSEITKIFQNLVHETFNHIKVRGEISNL-SQPKSGHTYFTLKDHQAVFNAVCWNN 60 >gi|167561819|ref|ZP_02354735.1| exodeoxyribonuclease VII large subunit [Burkholderia oklahomensis EO147] Length = 108 Score = 82.5 bits (202), Expect = 2e-13, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 42/102 (41%), Gaps = 1/102 (0%) Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462 + ++ + + + L R++ L + + V+ L+ + + TL+RGY Sbjct: 1 QLRWQRARPDLTQARQMLATLAQRLDTALQRRHERDAARVTACAARLEVLSPRRTLERGY 60 Query: 463 TSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 ++ D + L + R+ ++ +G A+ + + P Sbjct: 61 AALIDAQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 102 >gi|329890593|ref|ZP_08268936.1| exodeoxyribonuclease large subunit [Brevundimonas diminuta ATCC 11568] gi|328845894|gb|EGF95458.1| exodeoxyribonuclease large subunit [Brevundimonas diminuta ATCC 11568] Length = 95 Score = 81.0 bits (198), Expect = 5e-13, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 37/99 (37%), Gaps = 4/99 (4%) Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +++ ++ +R L + K K G+ I+D I L+ + I F Sbjct: 1 MPRRLERAEDRLTALSRALTTLNPKTP-KPGFARIEDAEGAMIASAAALSPGQAVRIVFN 59 Query: 491 DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 DG +A + + P + + QG+LF Sbjct: 60 DGAKDATIDGEGA---TPRPTPKPAPRPKAPPAGQGDLF 95 >gi|289804318|ref|ZP_06534947.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 58 Score = 80.2 bits (196), Expect = 8e-13, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%) Query: 448 ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 L++ + TL RGYT T+ + + + + + DG + V + P Sbjct: 1 HLEAVSPLATLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTP 56 >gi|260577033|ref|ZP_05845013.1| exodeoxyribonuclease VII, large subunit [Rhodobacter sp. SW2] gi|259020789|gb|EEW24105.1| exodeoxyribonuclease VII, large subunit [Rhodobacter sp. SW2] Length = 195 Score = 79.4 bits (194), Expect = 1e-12, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 62/208 (29%), Gaps = 17/208 (8%) Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE---- 381 R D L L + R+ + ++ L + + + + + + +E Sbjct: 1 QRFDLWAGRLSPALAAAVARQRARLQPLAAHLRVRVLADMLARRGERLADLGRGLEAGQA 60 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + +++ L L ++ + L R++ ++ Sbjct: 61 RRLERAGDRALALSARLAPALARLLADAGRQVQRGRADLAALDARLQAAQKQRLARLSDR 120 Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINK 501 + R + Y TL+RGY ++ + +T K + + F DG+ Sbjct: 121 LEALERTRATLGYAETLRRGYVVVRG-DGAVVTSKALAERAAALELEFHDGRM------- 172 Query: 502 APPKEQPTKKCQLHNNKREKQGTQGELF 529 + E QG LF Sbjct: 173 -----ALGLRAAKPRKAGEPGPDQGSLF 195 >gi|330950775|gb|EGH51035.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae Cit 7] Length = 82 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%) Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + +IK+ + + L + TL RGY+ + D + I T R+ Sbjct: 1 MREQIKARKLQLQSQVQTLNVVSPLATLGRGYSILLDERGHAIRSAAQTQTGQRLTARLG 60 Query: 491 DGQANAIVIN 500 +G+ V + Sbjct: 61 EGELQVRVED 70 >gi|315303028|ref|ZP_07873738.1| exodeoxyribonuclease 7 large subunit [Listeria ivanovii FSL F6-596] gi|313628595|gb|EFR97018.1| exodeoxyribonuclease 7 large subunit [Listeria ivanovii FSL F6-596] Length = 124 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 31/100 (31%), Gaps = 1/100 (1%) Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462 + + I + T ++ + ++K S L+ + LKRG+ Sbjct: 20 RLNYYHPEKEITLQKEQLILRRTALDKAIKQQLKDKQQSFVRQVEALEHLSPLALLKRGF 79 Query: 463 TSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 + L I + GQ +A++ K Sbjct: 80 GVTYKEK-KLVKSVVQLEVGDNIQVKMQGGQIDALITAKE 118 >gi|289524508|ref|ZP_06441362.1| exodeoxyribonuclease 7 large subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502253|gb|EFD23417.1| exodeoxyribonuclease 7 large subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 91 Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 32/83 (38%) Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRN 478 I +L + L+ I S ++ L + + L RG+ + + + Sbjct: 4 EIARLTQSLSMNLNKIISSLKERLTHAAASLDALSPLKCLSRGWITCLSKDGETVVSLSQ 63 Query: 479 LATKTRILINFFDGQANAIVINK 501 +A + + DG+ANA + + Sbjct: 64 VAIGDEVSLCMIDGRANAEITSI 86 >gi|309800404|ref|ZP_07694568.1| exodeoxyribonuclease VII, large subunit [Streptococcus infantis SK1302] gi|308115978|gb|EFO53490.1| exodeoxyribonuclease VII, large subunit [Streptococcus infantis SK1302] Length = 73 Score = 76.7 bits (187), Expect = 8e-12, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%) Query: 12 HPEYSVSELSYHLKHIVESN--LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 SV+ L+ +LK + + L V + G++S +R + H YFSLKD+ + I A IW Sbjct: 2 EKYLSVTTLTKYLKMKFDKDPYLERVYLTGQVSNFRKRPT--HQYFSLKDDRAVIQATIW 59 Query: 70 KGTLNKIE 77 G K+ Sbjct: 60 SGIYQKLG 67 >gi|148985101|ref|ZP_01818340.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP3-BS71] gi|147922546|gb|EDK73664.1| exodeoxyribonuclease VII large subunit [Streptococcus pneumoniae SP3-BS71] Length = 169 Score = 76.7 bits (187), Expect = 9e-12, Method: Composition-based stats. Identities = 18/171 (10%), Positives = 52/171 (30%), Gaps = 3/171 (1%) Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + ++ +K + Q + + Q ++Q ++ + Sbjct: 1 MVTAVRNVLSKKQEALKKCSQSVIFRQPERLYDGYLQRLDQLQLRLKQSLRTRISDNKQL 60 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 + + L L +I + +L + ++ + + L Sbjct: 61 VQARTHQLVQL--SPVTKIQRYQDRLGQLDKLLGSQMALVYDAKVAEAKRLSEALLMLDT 118 Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + RGY ++ + + +L K ++ + DGQ V + + Sbjct: 119 SRIVARGYAIVKKEE-SVVDSVESLKKKDQVTLLMRDGQVELEVKDVKTKE 168 >gi|313608928|gb|EFR84683.1| exodeoxyribonuclease 7 large subunit [Listeria monocytogenes FSL F2-208] Length = 122 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 1/96 (1%) Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 I + + ++ + +K S L+ + + LKRG+ Sbjct: 22 YHPNKEIELQKEQMTLRLQALDKAMKQLLKDKQQSFFRQVDALEHLSPLSLLKRGFGVTY 81 Query: 467 DTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 N + + L I + G +A++ K Sbjct: 82 -KENTLVKSVQELEAGDNIQVKMQGGHIDALITAKE 116 >gi|46204803|ref|ZP_00049456.2| COG1570: Exonuclease VII, large subunit [Magnetospirillum magnetotacticum MS-1] Length = 96 Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 31/96 (32%), Gaps = 11/96 (11%) Query: 445 TTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPP 504 +L + +YK L RGY ++D + + + A R+ + F DG A Sbjct: 1 MAGLLGALSYKAVLARGYALVRDADGLPVRTREAAAGTARLQLQFADGAIFARPEEGPAE 60 Query: 505 -----------KEQPTKKCQLHNNKREKQGTQGELF 529 + + E QG LF Sbjct: 61 IPPPPRPKRAPRRPAPESAAKAEAVAEPAARQGSLF 96 >gi|325067879|ref|ZP_08126552.1| exodeoxyribonuclease VII [Actinomyces oris K20] Length = 75 Score = 75.2 bits (183), Expect = 2e-11, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%) Query: 451 SFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 + + + L RGYT ++ IT ++ I G+ A V+ P+ Sbjct: 16 ALSPQGVLDRGYTILRTPGGKVITSAEDVKKGDLIEGVLAHGRLVAQVVGATKPRPA 72 >gi|89071021|ref|ZP_01158238.1| Exonuclease VII, large subunit [Oceanicola granulosus HTCC2516] gi|89043409|gb|EAR49626.1| Exonuclease VII, large subunit [Oceanicola granulosus HTCC2516] Length = 127 Score = 74.8 bits (182), Expect = 3e-11, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 45/126 (35%), Gaps = 10/126 (7%) Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + + +L + + + + ++ R+ ++ Y+ TL+RGY ++ + + Sbjct: 3 MRERRRKLDELSLSLTRLGQADLVARKDRLAALDRLRETLGYRATLRRGYAVVRG-DGDV 61 Query: 473 ITQKRNLATKTRILINFFDGQA---------NAIVINKAPPKEQPTKKCQLHNNKREKQG 523 +T + I F DG+ P P + ++E Sbjct: 62 VTSAAAARAARALEIEFADGRMVPGGGGGGAGGGAAGAVPGGAAPGASGRARTRRKEAPP 121 Query: 524 TQGELF 529 QG+LF Sbjct: 122 EQGDLF 127 >gi|255030964|ref|ZP_05302915.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes LO28] Length = 179 Score = 74.4 bits (181), Expect = 4e-11, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 41/158 (25%), Gaps = 3/158 (1%) Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 RL L + RK R + + + H +++ + + Sbjct: 25 PDYRDLEERLAERKYRLLAVTRQALERKERSLEQLKQHLILNGPKHQLEQQMERTDYFSE 84 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + + + LH I + + ++ + +K Sbjct: 85 RLNNAFSKQIFVKQTAFDRLNDRLHY--YHPNKEIELQKEQMTLHLQALDKAMKQLLKDK 142 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQK 476 S L+ + + LKRG+ N + Sbjct: 143 QQSFFRQVDALEHLSPLSLLKRGFGVTY-KENTLVKSV 179 >gi|322392010|ref|ZP_08065473.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC 700780] gi|321145108|gb|EFX40506.1| exodeoxyribonuclease VII large subunit [Streptococcus peroris ATCC 700780] Length = 152 Score = 73.3 bits (178), Expect = 1e-10, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 3/153 (1%) Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + + Q + + Q ++Q V L + E++ L L N+ Sbjct: 2 LSQSVIFRQPERLYDSYLQRLDQLQLRLKQSVNTELVRQQQKVLEQVHRLEQL--SPINK 59 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 I + +L + ++ + V + L + RGY ++ + Sbjct: 60 IQRYQDRLLQLEKLLRSQMAVVYDAKVAEVKRLSEALMMLDTGRIVARGYAIVKKED-TV 118 Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + + L K ++ + DGQ V + + Sbjct: 119 VDSVQILKKKDQLTLLMRDGQVKLEVKDVKAKE 151 >gi|255024115|ref|ZP_05296101.1| exodeoxyribonuclease VII large subunit [Listeria monocytogenes FSL J1-208] Length = 92 Score = 72.9 bits (177), Expect = 1e-10, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 29/87 (33%), Gaps = 1/87 (1%) Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 + + ++ + +K S L+ + + LKRG+ N + Sbjct: 1 QKEQMTLRLQALDKAMKQLLKDKQQSFFRQVDALEHLSPLSLLKRGFGVTY-KENTLVKS 59 Query: 476 KRNLATKTRILINFFDGQANAIVINKA 502 + L I + G +A++ K Sbjct: 60 VQELEVGDNIQVKMQGGHIDALITAKE 86 >gi|255524171|ref|ZP_05391131.1| exodeoxyribonuclease VII large subunit [Clostridium carboxidivorans P7] gi|255512156|gb|EET88436.1| exodeoxyribonuclease VII large subunit [Clostridium carboxidivorans P7] Length = 135 Score = 72.5 bits (176), Expect = 2e-10, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 5/126 (3%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ-----TKNRIFYLHTHIKKLITRI 427 + + Q I I KEK L +L+ + I + +I +L + Sbjct: 1 MEDLQSKIVSYKNTLNNLIDFILKEKSNSLELLKRNLDVNSPYSYIVNEYNNIDRLKELM 60 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILI 487 + +++ + +L + N L +GY I++ + +NL ++ I Sbjct: 61 NIKIKTRLEKEREKLIKANSLLTAHNPMNILNKGYAVIENEKIGVVNTIQNLKKLDKVKI 120 Query: 488 NFFDGQ 493 DG Sbjct: 121 TLKDGS 126 >gi|297380181|gb|ADI35068.1| Exodeoxyribonuclease 7 large subunit [Helicobacter pylori v225d] Length = 120 Score = 71.3 bits (173), Expect = 4e-10, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 3/99 (3%) Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 R ++ F ++ + + A+ QL T D I++ARGGGS+EDL+ FN Sbjct: 24 RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSMEDLYSFN 80 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267 DE I A+ + +SAIGHE+D+ L+D ADLRA TP Sbjct: 81 DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 119 Score = 64.0 bits (154), Expect = 6e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135 +EG E +V G I+ + YQI + P G+L ALE+ K+K L + F Sbjct: 6 LKEGQEVVVSGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 63 >gi|76800287|ref|ZP_00782001.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 18RS21] gi|76584514|gb|EAO61405.1| exodeoxyribonuclease VII, large subunit [Streptococcus agalactiae 18RS21] Length = 154 Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 3/140 (2%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYLHTHIK 421 ++ L+K ++ Q + +R ++K +LH + K RI + Sbjct: 11 RQPERLYDGFLQKLDNLNQQLTYSMRDKLQTVRQKQGLLHQKLQGIDLKQRIHIYQERVV 70 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + + ++ + S L S + RGY I+ N+ ++ + Sbjct: 71 QSRRLLSSTMTSQYDSKLARFEKAQDALISLDSSRIVARGYAIIE-KNHTLVSTTNGINE 129 Query: 482 KTRILINFFDGQANAIVINK 501 + + DG V + Sbjct: 130 GDHLQVKMQDGLLEVEVKDV 149 >gi|188527802|ref|YP_001910489.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470] gi|188144042|gb|ACD48459.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Shi470] Length = 120 Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats. Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 3/99 (3%) Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 R ++ F ++ + + A+ QL T D I++ARGGGSIEDL+ FN Sbjct: 24 RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSIEDLYPFN 80 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267 DE I A+ + +SAIGHE+D+ L+D ADLRA TP Sbjct: 81 DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 119 Score = 64.4 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135 +EG E +V G I+ + YQI + P G+L ALE+ K+K L + F Sbjct: 6 LKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 63 >gi|289677933|ref|ZP_06498823.1| exodeoxyribonuclease VII large subunit [Pseudomonas syringae pv. syringae FF5] Length = 70 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 22/58 (37%) Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 + L + TL RGY+ + D + I T R+ +G+ + V + Sbjct: 1 QSQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQTGQRLTARLGEGELHVRVED 58 >gi|308063808|gb|ADO05695.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Sat464] Length = 120 Score = 70.9 bits (172), Expect = 5e-10, Method: Composition-based stats. Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 3/99 (3%) Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 R ++ F ++ + + A+ QL T D I++ARGGGSIEDL+ FN Sbjct: 24 RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSIEDLYSFN 80 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267 DE I A+ + +SAIGHE+D+ L+D ADLRA TP Sbjct: 81 DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 119 Score = 64.4 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135 +EG E +V G I+ + YQI + P G+L ALE+ K+K L + F Sbjct: 6 LKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 63 >gi|325522434|gb|EGD01014.1| exodeoxyribonuclease VII large subunit [Burkholderia sp. TJI49] Length = 80 Score = 70.2 bits (170), Expect = 7e-10, Method: Composition-based stats. Identities = 13/74 (17%), Positives = 32/74 (43%), Gaps = 1/74 (1%) Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINF 489 + + + V+ L+ + + TL+RGY ++ D + L + R+ ++ Sbjct: 1 MQRRHERDTARVAACAARLEVLSPQRTLERGYAALIDAQTGRAVRTPNALKPQRRLTVHL 60 Query: 490 FDGQANAIVINKAP 503 +G A+ + + P Sbjct: 61 AEGSADVSLADVQP 74 >gi|308062297|gb|ADO04185.1| exodeoxyribonuclease VII large subunit [Helicobacter pylori Cuz20] Length = 129 Score = 70.2 bits (170), Expect = 9e-10, Method: Composition-based stats. Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 3/99 (3%) Query: 169 RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN 228 R ++ F ++ + + A+ QL T D I++ARGGGS++DL+ FN Sbjct: 33 RGDYQINCFEIEPKDIGS---LTLALEQLKEKLRLNTKNAFDAIVVARGGGSMKDLYSFN 89 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267 DE I A+ + +SAIGHE+D+ L+D ADLRA TP Sbjct: 90 DEKIADALHLAKTFSMSAIGHESDFLLSDLVADLRASTP 128 Score = 64.4 bits (155), Expect = 4e-08, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKK--LLEEGLFSD 135 +EG E +V G I+ + YQI + P G+L ALE+ K+K L + F Sbjct: 15 LKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLNTKNAFDA 72 >gi|328479793|gb|EGF48909.1| exodeoxyribonuclease VII large subunit [Lactobacillus rhamnosus MTCC 5462] Length = 140 Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 2/114 (1%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + Q + + +Q ++Q + + + E + +A + Q ++ L Sbjct: 1 PDRLYDQYVQRVDQLRQRLQQSI--NNQLRENEHRLAMATAQLDGRQLLVKVANLQRQQV 58 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 R++ + + + H +V+ L + L RG+ + D + Sbjct: 59 DDRRRLDRAMIALVTAKHQAVANAALGLDHLSPLKILGRGFAFVTDDAGKMLKN 112 >gi|210631301|ref|ZP_03296844.1| hypothetical protein COLSTE_00729 [Collinsella stercoris DSM 13279] gi|210160068|gb|EEA91039.1| hypothetical protein COLSTE_00729 [Collinsella stercoris DSM 13279] Length = 56 Score = 67.5 bits (163), Expect = 5e-09, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 17/52 (32%) Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQ 507 L RGY+ D + T + A + + DG A V + Sbjct: 1 KVLARGYSIAYDGDGRVATSAGSFAPGDGLRVRMADGDVRARVDEVSLAPRP 52 >gi|238809724|dbj|BAH69514.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 101 Score = 67.5 bits (163), Expect = 6e-09, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%) Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + + + TR + H + + SI + L++G+ + + NN Sbjct: 10 LQKIQAKFEMAKTRFKNQALHCFNNQLATFSIVKEKVIQRNPLKILEKGFAKVTNENNQI 69 Query: 473 ITQKRNLATKTRILINFFDGQANAIVINKAPP 504 I + + ++ I DG A +V Sbjct: 70 IKTIKQVKVDKKLYIELKDGIAEVVVQKVNKK 101 >gi|194246841|ref|YP_002004482.1| similar to exonuclease VII, large subunit (weak similar to botulinum neurotoxin subunit) [Candidatus Phytoplasma mali] gi|193807200|emb|CAP18642.1| similar to exonuclease VII, large subunit (weak similar to botulinum neurotoxin subunit) [Candidatus Phytoplasma mali] Length = 417 Score = 64.8 bits (156), Expect = 4e-08, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 7/131 (5%) Query: 147 IIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTC 206 I ++T+ G I DI ++ + IF V QG +I++ + ++N Sbjct: 117 KIGILTNEKGDAISDIEAELNKENYKKYEIFSVFTQGYNAIVDISDKVKEIN------DK 170 Query: 207 PRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265 + +II+L+RGGG+ D+ FN+ I++ I S IPI++AIGH D T +D A A Sbjct: 171 NQCNIILLSRGGGNESDIDAVFNNLDIIKTIQQSKIPIVTAIGHANDVTFSDLVAFDNAT 230 Query: 266 TPTGAAEMAVP 276 TPT ++ + Sbjct: 231 TPTSGIQIVLK 241 >gi|167590712|ref|ZP_02383100.1| exodeoxyribonuclease VII large subunit [Burkholderia ubonensis Bu] Length = 67 Score = 62.1 bits (149), Expect = 2e-07, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKA 502 L+ + + TL+RGY ++ D + L + R+ ++ +G A+ + + Sbjct: 1 ACAARLEVLSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGSADVSLADVQ 60 Query: 503 P 503 P Sbjct: 61 P 61 >gi|319949372|ref|ZP_08023441.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4] gi|319436955|gb|EFV92006.1| exodeoxyribonuclease VII large subunit [Dietzia cinnamea P4] Length = 415 Score = 61.3 bits (147), Expect = 4e-07, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 89/292 (30%), Gaps = 31/292 (10%) Query: 75 KIEFLPEEGIEFLVIGKITTFPGSSKY------QIIIESLIPSG--SGTLLTALEKRKKK 126 ++ G IG++ S ++ I+ + G L Sbjct: 39 SLDKCLINGRVVTAIGRLGV--NRSSVVELRVQKLFIDDMRAVGSVQAALNALPVSLDAL 96 Query: 127 LLEEGLFSD---QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL-----RVIIFP 178 + + + +P I V+ + D + + ++ Sbjct: 97 GIAADRLDPKGREARLTVPQPMSHITVVAGGSSQGRADFERALRRTVGKAATQPQLQHIS 156 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 +QG + I + + L+ D + + RGGG+ DLW F+ + A+ Sbjct: 157 CSMQGPDVASRIIDVLDGLD-------PATTDAVCIVRGGGAWFDLWPFHSLALAHAVRG 209 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + P+ +AIGH +D D AAD A TP+ R + Sbjct: 210 FAAPVYTAIGHSSDRFAIDCAADGAADTPSALGVALGLAAGAAVPGSEVASQRSVPLQTG 269 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 + + + + + L R R +L E + +K+ Sbjct: 270 ------SRVANTPLRSGSFRRELEEERQARLRAESDLVRAQEELQRQKHFSH 315 >gi|256026616|ref|ZP_05440450.1| exodeoxyribonuclease VII large subunit [Fusobacterium sp. D11] Length = 77 Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFF 490 + + + NTLKRGYT Q N I ++ ++ Sbjct: 1 MESFLAQKRNIFETKIDKISVLNPINTLKRGYTVSQVKNKR-IDVLDDIEINDEMVTILK 59 Query: 491 DGQANAIVINK 501 DG+ +IV K Sbjct: 60 DGKVISIVKEK 70 >gi|239503439|ref|ZP_04662749.1| exodeoxyribonuclease VII large subunit [Acinetobacter baumannii AB900] Length = 375 Score = 57.1 bits (136), Expect = 6e-06, Method: Composition-based stats. Identities = 46/233 (19%), Positives = 85/233 (36%), Gaps = 27/233 (11%) Query: 81 EEGIEFLVIGKITT--FPGSSKYQII---IESLIPSGSGTLLTAL----EKRKKKLLEEG 131 + G + G T F ++ I+++ + + + KK + Sbjct: 82 KNGSYVEIHGVPTFNFFREQCTKRLKGYTIQAIEDDSAIQAFQSKLSTLDDLKKHRPKSH 141 Query: 132 LFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC-RFPLRVIIFPVKVQGDECPKEI 190 F +Q + + ++ + +D ++ R PV + + ++ Sbjct: 142 TFPNQFDLSVA-----VIYSSASKVDIQKDFYNYLNEYRDEFNFDEKPVSLSNVDALSQV 196 Query: 191 ANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHE 250 +C D++++ RGGGS + FNDE ++ A +N + I +GH Sbjct: 197 I------------SSCVDHDVVVVIRGGGSSDAFDIFNDEKVLNAFSNLNGYRIVGLGHN 244 Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +D TL DY AD A TP+ A + L S LE + I K Sbjct: 245 SDVTLLDYLADHSAITPSDAGIHLKGQFDELFSRNDILEQQKIKIFKLESDLK 297 >gi|144897552|emb|CAM74416.1| hypothetical protein MGR_0986 [Magnetospirillum gryphiswaldense MSR-1] Length = 79 Score = 57.1 bits (136), Expect = 7e-06, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 8/85 (9%) Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + S ++ L RG+ I+D + + I F DG + +V AP Sbjct: 2 HLAAAVDSRDPQDVLDRGFAVIRDDAGKLV-SAADAQAGAAWSIEFKDGTTDVVVGANAP 60 Query: 504 PKEQPTKKCQLHNNKREKQGTQGEL 528 P KK + QG L Sbjct: 61 PAPPRPKKGK-------DDVRQGSL 78 >gi|58038980|ref|YP_190944.1| exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H] gi|58001394|gb|AAW60288.1| Exodeoxyribonuclease VII large subunit [Gluconobacter oxydans 621H] Length = 344 Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 83/246 (33%), Gaps = 33/246 (13%) Query: 70 KGTLNKIEFLPEEGIEFLVIG--KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKL 127 K L + E P G V G + + G + + ++ G ++K + Sbjct: 87 KSILARAEVGP--GDHVHVTGMLRARQYRGQVVLRFEVVAVELHDPG-------RQKVER 137 Query: 128 LEEGLFSDQHKNPIPFIPK------IIAVITSPTGAVI--RDILQRISCRF-PLRVIIFP 178 +E + P F P + +I S + + D LQ + + P RV P Sbjct: 138 VERSVLDVLRGLPCAFHPYPTRPDARLLLIHSAASSALVAEDFLQALGGAWRPERVRSLP 197 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIAN 238 + L E R DII+L RGGG + D F + +++ A+A Sbjct: 198 TAMNDPG-------------RLAEAIRTCREDIIVLIRGGGDVSDFVVFENPLVLEALAV 244 Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + +GH + TLA+ D A TP A + + A+ + Sbjct: 245 CPAHRVLGLGHTANRTLAERVVDHAATTPADAGHYIRRMSGRVWQEQEEARAQQEEMAAL 304 Query: 299 LIKYKI 304 Sbjct: 305 RDSVTQ 310 >gi|257053992|ref|YP_003131825.1| nucleic acid binding OB-fold tRNA/helicase-type [Halorhabdus utahensis DSM 12940] gi|256692755|gb|ACV13092.1| nucleic acid binding OB-fold tRNA/helicase-type [Halorhabdus utahensis DSM 12940] Length = 730 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 18/167 (10%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 P + + + P V +L + V + GEI +SG F L+D Sbjct: 211 EPAEAERTPEPPSVDVGDLEGWIGDT-------VRITGEIVD--ARQTSGPTVFELRDGT 261 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 +D + + EEG + G++ + Q+ E L LE Sbjct: 262 GSVDCAAFVEAGVRAYPSVEEGAVVEIDGEVR--ERRGELQVETEELELFDEDKREAVLE 319 Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISC 168 + E L + I P + + IRD++ I Sbjct: 320 EI-----EATLSERARPDEID--PLVADEAVAAESESIRDVVGEIRR 359 >gi|171323163|ref|ZP_02911763.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria MEX-5] gi|171091441|gb|EDT37104.1| exodeoxyribonuclease VII, large subunit [Burkholderia ambifaria MEX-5] Length = 60 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 452 FAYKNTLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 + + TL+RGY ++ D + L + R+ ++ +G A+ + + P Sbjct: 2 LSPQRTLERGYAALIDAQTGRAVRAPSALKPQRRLTVHLAEGSADVSLADVQP 54 >gi|297487911|ref|XP_002696577.1| PREDICTED: A kinase (PRKA) anchor protein 13 [Bos taurus] gi|296475623|gb|DAA17738.1| A kinase (PRKA) anchor protein 13 [Bos taurus] Length = 2637 Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 19/213 (8%), Positives = 63/213 (29%), Gaps = 17/213 (7%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2307 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNANLVFMHKRNSEQVIQSVVHLHEL 2366 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ R + + +++K RQ + Q+ Sbjct: 2367 LSTLQGVVLQQDSYIEDQKLLLSERALTRTASRPSSLIEQEKQRSLEKQRQDLANLQRQQ 2426 Query: 381 EQIVKQHLRYIFLE---------KKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424 Q ++ R+ ++ ++A ++ + +++ Sbjct: 2427 AQHQEEKRRHEREWESRERALQEREARLAQREDELRRSCQDLEREREELQQRKGAYQGDL 2486 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 R+ +++ + + L +Y+NT Sbjct: 2487 ERL-RAAQRQLEREQEQLRRDSERLSQVSYQNT 2518 >gi|312136892|ref|YP_004004229.1| tRNA(ile2) 2-agmatinylcytidine synthetase [Methanothermus fervidus DSM 2088] gi|311224611|gb|ADP77467.1| tRNA(Ile2) 2-agmatinylcytidine synthetase [Methanothermus fervidus DSM 2088] Length = 416 Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 7/101 (6%) Query: 31 NLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFLV 88 V GE+ + GH +F+LKD+ I ++ T KI + G + + Sbjct: 261 QFESYVVIGEVKDEPKVIEGGHVFFTLKDSSGEITCAAYEPTKEFRKIVMKLKPGDKLKI 320 Query: 89 IGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 G I + IE + L L K + Sbjct: 321 YGGIGVHN-----TLNIEKMKILELAPLYKKLNPLCPKCGK 356 >gi|15679576|ref|NP_276693.1| hypothetical protein MTH1581 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622704|gb|AAB86054.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 137 Score = 51.7 bits (122), Expect = 3e-04, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 12/94 (12%) Query: 25 KHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFL----- 79 + +++ V V G ++ R SG + + D I A+I++ T I+ Sbjct: 44 RGMIDR---KVTVEGTVADVRESEHSGIIFLKINDGTGTITAVIFESTAETIKRNGPAPI 100 Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 +G+ V G++ + ++ +E PSG Sbjct: 101 LLKGMRVQVTGRVKEY--RGLLEVAVE--EPSGL 130 >gi|167533542|ref|XP_001748450.1| hypothetical protein [Monosiga brevicollis MX1] gi|163772969|gb|EDQ86614.1| predicted protein [Monosiga brevicollis MX1] Length = 1600 Score = 51.3 bits (121), Expect = 4e-04, Method: Composition-based stats. Identities = 25/259 (9%), Positives = 67/259 (25%), Gaps = 20/259 (7%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 A I+ + + ++ + L S + Sbjct: 531 DARPVAQRRVSNNLHAQLVKQISDQIKAQESLLLRLTTTNRELESQRVLYERRLALVEDE 590 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 + ++ L L I +K H + I + + R + +Q ++ Sbjct: 591 KQKIAADRDRLRSALAEISGQKTSHADQIRREYQRQLAELQSRAQRIEKDKLEQQ--RLE 648 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS--HKIKSCHTSV 442 + R + +I R++ K I +++ + ++++ + Sbjct: 649 QSRNRAAAQIDSLRTSIQTAKRQR-KEMIEQAQQEMRRNREQAREHEREINRLRRENAKT 707 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 L+ + + + I R L R+ D Q + Sbjct: 708 KTEASRLERL------------VTNKD---IAHARALEENKRLKARLRDNQPASRTKQSQ 752 Query: 503 PPKEQPTKKCQLHNNKREK 521 + K+ ++ Sbjct: 753 SSPWRNVKRNATKQVTKDP 771 >gi|169838357|ref|ZP_02871545.1| hypothetical protein cdivTM_14876 [candidate division TM7 single-cell isolate TM7a] Length = 102 Score = 50.9 bits (120), Expect = 6e-04, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 36/101 (35%), Gaps = 7/101 (6%) Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 + ++ I H+ + + + I ++ +I +S +N L Sbjct: 5 QSILRVKPTLHQIISDNKAHLHSRKLTARYHILNYIDLQKAKIAALGKIAKSLDPRNVLA 64 Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVIN 500 RGY ++ N+ L+ ++ I D A VI+ Sbjct: 65 RGYVIMRMENDI-------LSNGAQVDIETKDYFIKAKVID 98 >gi|149912523|ref|ZP_01901057.1| lipopolysaccharide biosynthesis [Roseobacter sp. AzwK-3b] gi|149812929|gb|EDM72755.1| lipopolysaccharide biosynthesis [Roseobacter sp. AzwK-3b] Length = 519 Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 83/271 (30%), Gaps = 18/271 (6%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E + ++ A+ ++ + R N + + ++ N S Sbjct: 152 EENVSMRKAASGQTLEFFVQEVARLDQELADQGQRILEFKLRNQNALPESVDFRRNRQAS 211 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + + ++ LS R R DRL E I + + D L + Sbjct: 212 LQERILQIERDLSSLRDRRDRLTEMYERTGSITMSEEEMTPEERRLIQLQDDLTTALTVY 271 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + Q L+ + K+A Q + I + ++EF Sbjct: 272 SEQNPRIQN---------LQRRVEVLENKVAEQRAAEGQGSEDLSPYEIQIADIEGQMEF 322 Query: 430 ILSHKIKSCHTSVSITTRILQSFAY-----KNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 ++ + + ++ L++ TL+R Y +++ N T + Sbjct: 323 LIEQR-TTIEEDLTELNASLEAT-PANAITLGTLERDYENLRIQYNQATADLSTARTGDQ 380 Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLH 515 I GQ VI +A +PT + Sbjct: 381 IEAQ-SRGQRI-TVIEQAVAPREPTAPDRRK 409 >gi|227885435|ref|ZP_04003240.1| conserved hypothetical protein [Escherichia coli 83972] gi|227837592|gb|EEJ48058.1| conserved hypothetical protein [Escherichia coli 83972] Length = 79 Score = 50.5 bits (119), Expect = 7e-04, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 3 PFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHS-SGHAYFSLKDNH 61 P ++ + VS +S VE V G+I S SG Y +L+D++ Sbjct: 9 PLKAADTTAENPWPVSVISQKFHGAVEK-WPAAWVEGQIVEINMRRSTSG--YITLRDSN 65 Query: 62 SRID 65 I Sbjct: 66 EDIS 69 >gi|317484212|ref|ZP_07943141.1| hypothetical protein HMPREF0179_00492 [Bilophila wadsworthia 3_1_6] gi|316924561|gb|EFV45718.1| hypothetical protein HMPREF0179_00492 [Bilophila wadsworthia 3_1_6] Length = 317 Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats. Identities = 63/325 (19%), Positives = 111/325 (34%), Gaps = 43/325 (13%) Query: 13 PEYSVSELSY--------HLKHIVESNLSHVCVRGEISGYRGIHS--SGHAY-FSLKDNH 61 P SV+ LS LK+ V+ + +G I + + +G Y L D Sbjct: 2 PSLSVARLSSVFEDMAGAALKNAVDDSSCVFRTQGIIGDWTAKRTFWNGVHYSIELADGG 61 Query: 62 SRIDAI-IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK--YQIIIES---LIPSGSGT 115 I + + + P G V+G + S +++ + + + S G Sbjct: 62 KSI-CVDLPLEVIQNGGIRP--GDRVDVLGIPVVYLKKSVVLFKLHVHAASVIEASAGGR 118 Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVIT-----SPTGAVIRDILQRISCRF 170 ++ + + + PK I+ S V D + + Sbjct: 119 GPEPVKNVEGTISHLK----ELGFKRIPFPKRATAISVIHSKSHAANVFADFKNELDLK- 173 Query: 171 PLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 + V P + P IA AI Q + ++++L RGGG + F + Sbjct: 174 SVNVESLPTAMTD---PSAIARAIDQAS----------GNVVVLIRGGGDDAEFTTFQHD 220 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 +V+A+A + I+ +GH + T AD AD TPT A + Sbjct: 221 DVVKALARKAAHRITGLGHYGNLTYADIIADFCTTTPTSAGAYVREQLIRTYNMRQTERE 280 Query: 291 RLNNIIIRLIKYKINTLNSLLKALP 315 L + +I+ L +L AL Sbjct: 281 ALEEQAALIKALRISKLKWMLIALA 305 >gi|218459345|ref|ZP_03499436.1| exodeoxyribonuclease VII large subunit [Rhizobium etli Kim 5] Length = 47 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 4/51 (7%) Query: 479 LATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 L+ T I I F DG+ A+ P + + K + QG LF Sbjct: 1 LSAGTGIAIEFADGRVGAMTTEGGA----PPAGAKKRSAKLAEPPKQGSLF 47 >gi|124024834|ref|YP_001013950.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. NATL1A] gi|123959902|gb|ABM74685.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. NATL1A] Length = 1201 Score = 49.8 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 78/234 (33%), Gaps = 17/234 (7%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 +A +A + L ++ + + + + + L ++ Sbjct: 883 TLASAHIAWREQSKLLTTNRQDLINQQKDLETRFGEQRRERDCVEADVAKKRFNLQEMQW 942 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIV 384 L RL E + N++ I + + ++ + + + + + + +E Q Sbjct: 943 SLQRLR-EDQKNMKEEIRMETIRCTELERKLPNPMPLISDEIRDNGLDDLLSKLEDLQKR 1001 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-------- 436 + L + + E++A L + +NR+ L +L+ RIE + + + + Sbjct: 1002 MEELEPVNMLALEELAKLEERLNELENRLQVLTDERSELLLRIETVATLREEAFMEAFKA 1061 Query: 437 ---SCHTSVSITTR---ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + LQ + L+ G T + + + ++ + Sbjct: 1062 VDIHFREIFASLSEGDGHLQLENPEEPLEGGLTLVAHPKGKPVRRLAAMSGGEK 1115 >gi|72383256|ref|YP_292611.1| condensin subunit Smc [Prochlorococcus marinus str. NATL2A] gi|72003106|gb|AAZ58908.1| condensin subunit Smc [Prochlorococcus marinus str. NATL2A] Length = 1183 Score = 49.4 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 27/234 (11%), Positives = 78/234 (33%), Gaps = 17/234 (7%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 ++ +A + L ++ + + + + + L ++ Sbjct: 865 TLASSHIAWREQSKLLNTNRQDLINQQKDLETRFGEQRRERDCVEADVAKKRLNLQEMQW 924 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIV 384 L RL E + N++ I + + ++ + + + + + + +E Q Sbjct: 925 SLQRL-MEDQKNMKEEIRMETIRCTELERKLPNPRPLISDEIRDNGLDDLLSKLEDLQKR 983 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-------- 436 + L + + E++A L + +NR+ L +L+ RIE + + + + Sbjct: 984 MEELEPVNMLALEELAKLEERLNELENRLQVLTDERSELLLRIETVATLREEAFMEAFKA 1043 Query: 437 ---SCHTSVSITTR---ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + LQ + L+ G T + + + ++ + Sbjct: 1044 VDVHFREIFASLSEGDGHLQLENPEEPLEGGLTLVAHPKGKPVRRLAAMSGGEK 1097 >gi|116048621|ref|YP_792579.1| hypothetical protein PA14_55080 [Pseudomonas aeruginosa UCBPP-PA14] gi|115583842|gb|ABJ09857.1| hypothetical protein PA14_55080 [Pseudomonas aeruginosa UCBPP-PA14] Length = 401 Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 2/135 (1%) Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 PV L+ L + P ++++ARGGG ++ + + A+ Sbjct: 214 PVFSHCRRVETNFMEPEQFLSDLAKVCQDPAIQVLVIARGGGDSLEVIG-DSREVACALL 272 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 P +A+GH+ + L D AD TP+ + + + L+ L Sbjct: 273 ACGRPFYTALGHDDNVMLLDKHADRSFSTPSILGQALME-TARDITQRQELQESLGKFAQ 331 Query: 298 RLIKYKINTLNSLLK 312 K L + + Sbjct: 332 ENASLKEQLLQANAR 346 >gi|84489086|ref|YP_447318.1| hypothetical protein Msp_0259 [Methanosphaera stadtmanae DSM 3091] gi|84372405|gb|ABC56675.1| hypothetical protein Msp_0259 [Methanosphaera stadtmanae DSM 3091] Length = 122 Score = 49.0 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 11/97 (11%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK 70 + E SV+E+ K +++ V V G I Y +G +L D + I +I+ Sbjct: 29 NPEELSVNEID---KSKIDN---QVKVTGIIENYTIT-KTGTMIITLNDGSNVIKVVIFP 81 Query: 71 GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 T + G+ V ++ + + + ++IIE Sbjct: 82 ST--SLNTTLYNGMNITVTARVVEY--NGEMELIIEK 114 >gi|332653506|ref|ZP_08419251.1| DNA polymerase III, alpha subunit [Ruminococcaceae bacterium D16] gi|332518652|gb|EGJ48255.1| DNA polymerase III, alpha subunit [Ruminococcaceae bacterium D16] Length = 1155 Score = 48.6 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 26/153 (16%), Positives = 60/153 (39%), Gaps = 10/153 (6%) Query: 34 HVCVRGEISGYRGIHSSG---HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90 V V G I+ Y+ + AY +L+D+ + ++ + + L + E LV G Sbjct: 997 RVTVAGVIATYKTRTTRNNTLMAYVNLEDDTASMELLCFSRVLGESGGYIRENSAVLVTG 1056 Query: 91 KITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150 +I+ + QI+++++ P G + ++ + + ++P +++ Sbjct: 1057 RISVRDEK-EPQIMVDTIAPLNQGEVQQQEKEPRLYIRM-----PSRQDPRMRKVELVLS 1110 Query: 151 ITSPTGAVIRDILQRISCRFPLRVIIFPVKVQG 183 G + R+ R +I P +Q Sbjct: 1111 FFPGEGQAVLYFEDT-KKRYGARCLIHPALIQD 1142 >gi|313106799|ref|ZP_07793013.1| putative exonuclease [Pseudomonas aeruginosa 39016] gi|310879515|gb|EFQ38109.1| putative exonuclease [Pseudomonas aeruginosa 39016] Length = 1211 Score = 48.6 bits (114), Expect = 0.003, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342 + +++ S ++ L +L + RL L+ + Sbjct: 863 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + + L + + + + ++ ++++ ++ R LE + + +L Sbjct: 923 LQADWQAWRERQDNLDDSHLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R++ + L ++++ R+ + + + R QS A L+R Sbjct: 983 QHRRQRPETDREALEDNLRQQRERLATSEQAYLDTYSQLQADNQRREQSQALLAELER 1040 >gi|167835697|ref|ZP_02462580.1| exodeoxyribonuclease VII large subunit [Burkholderia thailandensis MSMB43] Length = 54 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Query: 457 TLKRGYTSIQDTN-NNFITQKRNLATKTRILINFFDGQANAIVINKAP 503 TL+RGY +I D + L + R+ ++ +G A+ + + P Sbjct: 1 TLERGYAAIIDAQTGRAVRAPAALKPQRRLTVHLAEGSADVSLADVQP 48 >gi|156837241|ref|XP_001642651.1| hypothetical protein Kpol_378p4 [Vanderwaltozyma polyspora DSM 70294] gi|156113205|gb|EDO14793.1| hypothetical protein Kpol_378p4 [Vanderwaltozyma polyspora DSM 70294] Length = 559 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 11/116 (9%), Positives = 43/116 (37%), Gaps = 1/116 (0%) Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 + R + ++H + + ++ R I +++ L I++ ++ + + + + ++ Sbjct: 1 MKRIRQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLK-RIRQQKRIQHQMMRRLLKRIR 59 Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 Q R ++ + + + + L I++ ++ +K Sbjct: 60 QQKRIQHQMMRQLLKRIRQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLKRIRQQ 115 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 19/177 (10%), Positives = 52/177 (29%), Gaps = 23/177 (12%) Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 I L+ I++ ++ + + + + ++Q R + + + + Sbjct: 5 RQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLKRIRQQKRIQHQMMRRLLKRIRQQKRI 64 Query: 409 TKNRIFYLHTHIKKLITRIEFI-LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + L I++ RI+ + +K I ++++ LKR Sbjct: 65 QHQMMRQLLKRIRQ-QKRIQHQMMRRLLKRIRQQKRIQHQMMR-----RLLKR-----IR 113 Query: 468 TNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGT 524 Q AT+ ++ V + P ++ + + Sbjct: 114 QQKRIQHQTNETATEE-----------DSTVEEDSTPDDETATEEDSTAEEDSTPDD 159 >gi|260790923|ref|XP_002590490.1| hypothetical protein BRAFLDRAFT_124497 [Branchiostoma floridae] gi|229275684|gb|EEN46501.1| hypothetical protein BRAFLDRAFT_124497 [Branchiostoma floridae] Length = 1384 Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 19/185 (10%), Positives = 54/185 (29%), Gaps = 2/185 (1%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 S + + K + + N Q + R ++ Sbjct: 328 PASCSSCMQHQRRHKAKKSKPKRKQRTTSGNGQQMERKQPLQKNIAPTQTILRALQKGLQ 387 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 L+ + + + +++ + L+K Q Q L+ ++ Sbjct: 388 ALQKGLQALQKGLQALQKGLQALQKGLQALQKGLQALQKGLQAPQKGPQALQMRLQALQK 447 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY-KN 456 + L + + + + L ++ L ++++ + + LQ+ Sbjct: 448 GLQALQKGPQALQKGLQAPQKGPQALQMKL-QALQMRLQALQMRLQALQKGLQALQKGLQ 506 Query: 457 TLKRG 461 TL++G Sbjct: 507 TLQKG 511 >gi|15599478|ref|NP_252972.1| exonuclease [Pseudomonas aeruginosa PAO1] gi|17433243|sp|Q9HWB8|SBCC_PSEAE RecName: Full=Nuclease sbcCD subunit C gi|9950502|gb|AAG07670.1|AE004844_2 probable exonuclease [Pseudomonas aeruginosa PAO1] Length = 1211 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 64/178 (35%), Gaps = 6/178 (3%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342 + +++ S ++ L +L + RL L+ + Sbjct: 863 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + + L + + + + ++ ++++ ++ R LE + + +L Sbjct: 923 LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R++ + L ++++ R+ +++ + R QS A L+R Sbjct: 983 QHRRQRPETDREALEDNLRQQRERLAASEQAYLETYSQLQADNQRREQSQALLAELER 1040 >gi|20089795|ref|NP_615870.1| hypothetical protein MA0917 [Methanosarcina acetivorans C2A] gi|19914737|gb|AAM04350.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 714 Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 11/114 (9%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77 SE+ +K + + + GE+ + +SG F++ D I ++ + Sbjct: 206 SEIDTSMKGRL------IRIEGEVIQVKQ--TSGPTIFTISDEGGFIPCAAFESAGKRSY 257 Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 + G+ + G++T P + QI + S+ G A++ R +K++EE Sbjct: 258 PHIDVGMIVSITGEVT--PRDEQVQIEVMSMKLLT-GEKEAAVKFRVEKVIEEK 308 >gi|261886026|ref|ZP_06010065.1| exodeoxyribonuclease VII large subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 82 Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 24/75 (32%), Positives = 38/75 (50%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 NDE + R I PI+SA+GHE D+ ++D+ +D R+ TPT A +P + SL Sbjct: 1 NDEHLARVIFTLETPIVSAVGHEIDYCISDFVSDHRSLTPTAAMVDLLPDANTILQSLDI 60 Query: 288 LEARLNNIIIRLIKY 302 + + I + Sbjct: 61 AFDKFESFIDGKFQN 75 >gi|116052316|ref|YP_792627.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14] gi|115587537|gb|ABJ13552.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14] Length = 1211 Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342 + +++ S ++ L +L + RL L+ + Sbjct: 863 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + + L + + + + ++ ++++ ++ R LE + + +L Sbjct: 923 LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R++ + L ++++ R+ + + + R QS A L+R Sbjct: 983 QHRRQRPETDREALEDNLRQQRERLATSEQAYLDTYSQLQADNQRREQSQALLAELER 1040 >gi|326429686|gb|EGD75256.1| hypothetical protein PTSG_06911 [Salpingoeca sp. ATCC 50818] Length = 2361 Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 18/193 (9%), Positives = 45/193 (23%), Gaps = 7/193 (3%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 ++ R + + RL + L ++ +E E Sbjct: 1293 EDVRRRRQDALSRLDAELDERRQAADADFERKRSALCELEEATEQRLQEARAAAEHDASE 1352 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + R + + + E + + + + + ++ A L + Sbjct: 1353 TRKQAKEDAERTRQQARDRAAEDEKAMREEMEARRHAMEEDLRKLQQRLEDDRQAALADM 1412 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSI 465 E + + + R E + + L+S + KR Sbjct: 1413 EEALQQERAKHQKRLAEQRERDEAAMREDLARLRQRTEDEIAQLESSS-----KR--ALA 1465 Query: 466 QDTNNNFITQKRN 478 Q Sbjct: 1466 QSEAGRVAVSVHE 1478 >gi|218893374|ref|YP_002442243.1| putative exonuclease [Pseudomonas aeruginosa LESB58] gi|218773602|emb|CAW29416.1| probable exonuclease [Pseudomonas aeruginosa LESB58] Length = 1211 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342 + +++ S ++ L +L + RL L+ + Sbjct: 863 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + + L + + + + ++ ++++ ++ R LE + + +L Sbjct: 923 LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R++ + L ++++ R+ + + + R QS A L+R Sbjct: 983 QHRRQRPETDREALEDNLRQQRERLAASEQAYLDTYSQLQADNQRREQSQALLAELER 1040 >gi|294498685|ref|YP_003562385.1| hypothetical protein BMQ_1922 [Bacillus megaterium QM B1551] gi|294348622|gb|ADE68951.1| hypothetical protein BMQ_1922 [Bacillus megaterium QM B1551] Length = 331 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%) Query: 146 KIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRT 205 +AVI+S G +D + + +F + P++I AI +++ Sbjct: 138 WRVAVISS-EGDGFKDAEAVLKSCEFIDYELFSCNLLE---PEDIVAAIKRVD------- 186 Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265 P I+++ RGGG + L FND IV AI N +++ +GH D T+AD + A Sbjct: 187 -PSYHILLIVRGGG--KGLGKFNDVRIVEAIQNHERYVVTGLGHTEDKTIADTVSCYCAN 243 Query: 266 TPTGAAEMAVPVKEHLQSSLIN 287 P AA + N Sbjct: 244 VPADAARHIKNKCIQEREKKKN 265 >gi|254244905|ref|ZP_04938227.1| exonuclease [Pseudomonas aeruginosa 2192] gi|126198283|gb|EAZ62346.1| exonuclease [Pseudomonas aeruginosa 2192] Length = 782 Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342 + +++ S ++ L +L + RL L+ + Sbjct: 434 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 493 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + + L + + + + ++ ++++ ++ R LE + + +L Sbjct: 494 LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 553 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R++ + L ++++ R+ + + + R QS A L+R Sbjct: 554 QHRRQRPETDREALEDNLRQQRERLAASEQAYLDTYSQLQADNQRREQSQALLAELER 611 >gi|55377803|ref|YP_135653.1| nuclease [Haloarcula marismortui ATCC 43049] gi|55230528|gb|AAV45947.1| putative nuclease [Haloarcula marismortui ATCC 43049] Length = 726 Score = 47.1 bits (110), Expect = 0.007, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 10/126 (7%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 + D P ++ + + + + V + GE+ G +SG F L+D +D Sbjct: 220 SDETTDEP------VAAAIGDLDDHVGADVRLEGEVVGI--RQTSGPTVFELQDETGTVD 271 Query: 66 AIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 + + EE + G + + Q+ E L + ++ Sbjct: 272 CAAFVEAGVRAYPEVEEDDYIRLSGDVR--ERRGELQVETEDLDVLEAEEREEVEQRLAD 329 Query: 126 KLLEEG 131 L +E Sbjct: 330 ALDDEA 335 >gi|172039636|ref|YP_001806137.1| DNA polymerase III subunit alpha [Cyanothece sp. ATCC 51142] gi|171701090|gb|ACB54071.1| DNA polymerase III alpha subunit, C-terminal intein/extein [Cyanothece sp. ATCC 51142] Length = 452 Score = 47.1 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 2/72 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ Y A+ L+D +++DA+ + + +I + E +V GK+ Sbjct: 292 EVKQYTTKKGDQMAFLVLEDGSAQVDAVCFPESYKRIREVLIEDSRLIVWGKVDY--RDD 349 Query: 100 KYQIIIESLIPS 111 K Q+I+E P Sbjct: 350 KVQLIVEDAEPV 361 >gi|294669570|ref|ZP_06734637.1| hypothetical protein NEIELOOT_01471 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308483|gb|EFE49726.1| hypothetical protein NEIELOOT_01471 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 48 Score = 47.1 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 8/43 (18%), Positives = 19/43 (44%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKE 506 ++++ I L ++ I FF+G+A+ V + + Sbjct: 1 MVKNSRGQVIRDAALLKQGQKLHITFFEGEADVRVTGEQAQPD 43 >gi|332884094|gb|EGK04374.1| hypothetical protein HMPREF9456_01402 [Dysgonomonas mossii DSM 22836] Length = 498 Score = 47.1 bits (110), Expect = 0.008, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 117/362 (32%), Gaps = 30/362 (8%) Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKY-QII-----IESLIPSGSGTLLTALEKRKKKLLE 129 ++ G +V G + Y Q+ I+ + L + + L+ Sbjct: 134 LKQKVTNGNLVMVAGIVLREIRKGGYVQLQLKATRIDIIQEQTISETEIKLAELRNIKLK 193 Query: 130 EGLFS-----DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGD 184 +G F ++K PKI + + I + + + I F V Sbjct: 194 KG-FHNVDTLLENKLYTEDRPKIALIFADTSITDKDFITGKAAASSHIDFIEFRVSF--- 249 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII 244 N L + D I + RGGG+ ++ ++ ++ I + PII Sbjct: 250 -------NKTSDFLQLLKNLDTQSFDAISIIRGGGTGLEVV--DNINLIETIVYMNTPII 300 Query: 245 SAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 SAIGHE D AD P + E + S A L + + + ++ Sbjct: 301 SAIGHENDKIFIKNIADKVVAVPHALGTYFKDMVERVISEKSKSRAALVEQVKKQYEKQL 360 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 K+L + ++ S NL+ + + + + ++ I Sbjct: 361 VQQEEQNKSLQKQLKEITESHKLTSEKSNTQITNLQKQLKEIFE--TNTVKDKRNQEQIT 418 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + + Q IEQ R L K+ + + + I + I +L Sbjct: 419 AFTVQIKKLTDNQ--IEQDRTATKRTEELNKQLIASQIKID--NLLKSIEEKNKQINQLS 474 Query: 425 TR 426 ++ Sbjct: 475 SK 476 >gi|292657002|ref|YP_003536899.1| putative nuclease [Haloferax volcanii DS2] gi|291370734|gb|ADE02961.1| putative nuclease [Haloferax volcanii DS2] Length = 729 Score = 46.7 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 5/82 (6%) Query: 28 VESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86 ++ + V V GEI+ + G F L+D + D + + E G Sbjct: 239 IDDRVGDVIRVEGEIASV--RQTGGPTVFELRDETAIADCAAFVEAGVRAYPEVEVGDYV 296 Query: 87 LVIGKITTFPGSSKYQIIIESL 108 + G++ + QI E L Sbjct: 297 RIDGEVE--RRRGELQIETEEL 316 >gi|322368923|ref|ZP_08043490.1| hypothetical protein ZOD2009_05537 [Haladaptatus paucihalophilus DX253] gi|320551654|gb|EFW93301.1| hypothetical protein ZOD2009_05537 [Haladaptatus paucihalophilus DX253] Length = 698 Score = 46.7 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 11/121 (9%) Query: 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 V + GEI +SG F L+D + +D +K + + G + G++ Sbjct: 210 DRVRIEGEI--VSTSQTSGPTVFELRDETAVVDCAAFKEAGVRAYPEVDTGDIARLTGEV 267 Query: 93 TTFPGSSKYQIIIESLIPSG-------SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145 +++ Q+ E L G L ALE + E L D I Sbjct: 268 EL--RNNELQVETEQLDALTEDEKATVEGRLAKALEDEARPADVEPLADDAAVEAIHEDI 325 Query: 146 K 146 + Sbjct: 326 R 326 >gi|107100133|ref|ZP_01364051.1| hypothetical protein PaerPA_01001154 [Pseudomonas aeruginosa PACS2] Length = 1211 Score = 46.7 bits (109), Expect = 0.009, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 63/178 (35%), Gaps = 6/178 (3%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE------II 342 + +++ S ++ L +L + RL L+ + Sbjct: 863 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQDEFQR 922 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + + L + + + + ++ ++++ ++ R LE + + +L Sbjct: 923 LQADWQAWRKRQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R++ + L ++++ R+ + + + R QS A L+R Sbjct: 983 QHRRQRPETDREALEDNLRQQRERLAASEQAYLDTYSQLQADNQRREQSQALLAELER 1040 >gi|167589925|ref|ZP_02382313.1| hypothetical protein BuboB_31613 [Burkholderia ubonensis Bu] Length = 655 Score = 46.7 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 30/282 (10%), Positives = 78/282 (27%), Gaps = 26/282 (9%) Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 A + I +A + +L + D A T A +SL + A+L Sbjct: 285 ALAQTATDIGTQTATFEQHSASLLNTMRDSHANLQTELASRDEQRLAAWNASLAAMAAKL 344 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI--------IIF 344 ++ + + ++ AL + + ++ L + + + Sbjct: 345 SDEWAQTSANHTSRQQAICDALAQTATDIGTQTTTFEQHSASLLNTMRESHANLQTELAS 404 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH------IEQIVKQHLRYIFLEKKEK 398 R + + + + + + + + Sbjct: 405 RDEQRLAAWSASLAEMAAKLRDEWAQTSAQAASRQQDICDTLARTANDITAQAQAHASDT 464 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYK 455 IA + L + + +L R+ + + ++ +L + + Sbjct: 465 IAEISRLVQAASEAPKAAAEVVAELRQRLSDSMVRDTAMLDERSRLLATLETLLDAVNHA 524 Query: 456 NTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAI 497 +T +RG + + +L R+ F D +A Sbjct: 525 STEQRG-AV-----DALVRTSADLL--DRVGARFND-TVDAE 557 >gi|295695077|ref|YP_003588315.1| protein of unknown function DUF16 [Bacillus tusciae DSM 2912] gi|295410679|gb|ADG05171.1| protein of unknown function DUF16 [Bacillus tusciae DSM 2912] Length = 263 Score = 46.7 bits (109), Expect = 0.010, Method: Composition-based stats. Identities = 18/156 (11%), Positives = 61/156 (39%), Gaps = 2/156 (1%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + L ++ + L +Q L RL+ + + LE +E + + + Sbjct: 26 RLEARVDRIDQRLEAVEQRLEAVEQRLEAVEQRLEVVEQRLEV-VEQRLEAVEQRLEVVE 84 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 R++ + + R ++E++ + + + + ++++ + E + R+ Sbjct: 85 QRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEAVEQRLEVVEQRLE 144 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + ++ + R+E + ++++ + R L Sbjct: 145 AVEQRLEVVEQRLE-AVEQRLEAVEQRLDAVERRLD 179 Score = 46.3 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 18/157 (11%), Positives = 65/157 (41%), Gaps = 2/157 (1%) Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 I++ ++ + L + DQ L RL+ + + LE +E + + + Sbjct: 13 ILQEVRSLHGRFDRLEARVDRIDQRLEAVEQRLEAVEQRLE-AVEQRLEVVEQRLEVVEQ 71 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R+++ + + R ++E++ + + + + ++++ ++ E + R+ Sbjct: 72 RLEAVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEVVEQRLEA 131 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + ++ + R+E + +++ + + L++ Sbjct: 132 VEQRLEVVEQRLE-AVEQRLEVVEQRLEAVEQRLEAV 167 >gi|296390979|ref|ZP_06880454.1| putative exonuclease [Pseudomonas aeruginosa PAb1] Length = 1211 Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 19/178 (10%), Positives = 61/178 (34%), Gaps = 6/178 (3%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE------LEHNLEII 342 + +++ S ++ L +L + RL + Sbjct: 863 QHACAQDWQLSLEHAAQAAQSAVETLQAPLDSLREEQLRLAEALEHLQQQRQRQQEEFQR 922 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + + L + + + + ++ ++++ ++ R LE + + +L Sbjct: 923 LQADWQAWRERQDNLDDSRLDALLGLSEEQATQWREQLQRLQEEITRQQTLEAERQAQLL 982 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R++ + L ++++ R+ + + + R QS A L+R Sbjct: 983 QHRRQRPETDREALEDNLRQQRERLATSEQAYLDTYSQLQADNQRREQSQALLAELER 1040 >gi|304315105|ref|YP_003850252.1| DNA-binding protein [Methanothermobacter marburgensis str. Marburg] gi|302588564|gb|ADL58939.1| predicted DNA-binding protein [Methanothermobacter marburgensis str. Marburg] Length = 429 Score = 46.7 bits (109), Expect = 0.011, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 7/90 (7%) Query: 30 SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFL 87 + GE+ + GH +F+L D+ +I+ ++ T K+ G Sbjct: 265 ETFGCYRISGEVLDSPRVIEGGHVFFTLGDDSGKIECGAYEPTKDFRKVILELIPGDRVT 324 Query: 88 VIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 V G I + IE + + L Sbjct: 325 VYGGI---GAQGT--LNIEKIHLERAAELY 349 >gi|116754783|ref|YP_843901.1| phosphoesterase domain-containing protein [Methanosaeta thermophila PT] gi|116666234|gb|ABK15261.1| phosphoesterase, RecJ domain protein [Methanosaeta thermophila PT] Length = 722 Score = 46.3 bits (108), Expect = 0.011, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 6/110 (5%) Query: 28 VESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86 ++ +L VC++GE+ + G F++ D+ + ++ + + + Sbjct: 211 LQKHLGKIVCIKGEVIQVKQTA--GPTIFTIADDSGTVSCAAFERAGVRAYPEIQGDMVV 268 Query: 87 LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL-FSD 135 VIG+ T +++ QI I S+ G E+ ++ + F Sbjct: 269 KVIGEPTI--RNNQMQIEIRSMKQLFGGEATKVREEIEQAIDRRAEPFDP 316 >gi|220906791|ref|YP_002482102.1| DNA gyrase subunit A [Cyanothece sp. PCC 7425] gi|219863402|gb|ACL43741.1| DNA gyrase, A subunit [Cyanothece sp. PCC 7425] Length = 839 Score = 46.3 bits (108), Expect = 0.013, Method: Composition-based stats. Identities = 24/260 (9%), Positives = 67/260 (25%), Gaps = 29/260 (11%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH-FNHI 353 + + + LK L + L ++ + + + Sbjct: 303 DLRDESDREGMRIVIELKRETQPQPLLDQLYRQTQLQTNFGVIMLALVDGQPRQMGLKEL 362 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIE------QIVKQHLRYIFLEKKEKIAILHMLRE 407 + + ++ R + + Q + ++ R I L ++ Sbjct: 363 LEHFLNFREHTLTRRYRHQLDQAQSRLHLVEGLLTALQNLDRVITLLREATDGSAAKQTL 422 Query: 408 QTKNRIFYLHTH--IKKLITRIEFILSHKIKSCHTSVSITTRILQSF------------- 452 Q++ + + + R+ + +++ H + + L++ Sbjct: 423 QSELNLSDRQADAILSMPLRRLTGLEQQNLRTEHDQLVGQIQQLETLLGSRHELLKALKK 482 Query: 453 AYKNTLKRGYT---SIQDTNN-NFITQKRNLATKTRILINFF-DGQANAIVINKAPPKEQ 507 +LKR Y + + LA T + + G + + Sbjct: 483 D-LRSLKRQYADQRLTRIQTEAEPLPSVEELAADTEVTLELSQRGYVRC-LRGGERGRRN 540 Query: 508 PTKKCQLHNNKREKQGTQGE 527 + N + Q E Sbjct: 541 QARSEGAKANNAKADPAQPE 560 >gi|21228136|ref|NP_634058.1| hypothetical protein MM_2034 [Methanosarcina mazei Go1] gi|20906581|gb|AAM31730.1| conserved protein [Methanosarcina mazei Go1] Length = 710 Score = 46.3 bits (108), Expect = 0.014, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 88/249 (35%), Gaps = 35/249 (14%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77 S++ +K + + + GE+ + +SG F++ D I ++ + Sbjct: 202 SQIDTSMKGRL------IRIEGEVIQVKQ--TSGPTIFTISDEGGFIPCAAFESAGKRSY 253 Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQH 137 + G+ + G++T P + QI + S+ G ++ R +K+++E Sbjct: 254 PHIDVGMIVSITGEVT--PRDEQVQIEVMSMKLLT-GEKEAVVKTRVEKVIDEKAAPADI 310 Query: 138 KNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQL 197 I + + V ++I + I P+ ++ I +AI Sbjct: 311 PFLIESEI--LEKLRPRMLHVAKEIKKAILHSTPI-------LLRHHADADGITSAIAIE 361 Query: 198 NTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLAD 257 + ++ GGS + + + RA + + ++ + + + L D Sbjct: 362 RAILP----------LITEIGGSDAEYYFYK-----RAPSKAPFYELADVTRDISFALED 406 Query: 258 YAADLRAPT 266 YA + Sbjct: 407 YARHGQKMP 415 >gi|313673612|ref|YP_004051723.1| metal dependent phosphohydrolase [Calditerrivibrio nitroreducens DSM 19672] gi|312940368|gb|ADR19560.1| metal dependent phosphohydrolase [Calditerrivibrio nitroreducens DSM 19672] Length = 311 Score = 45.9 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 13/84 (15%) Query: 57 LKDNHS-RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115 L D +I I++ K++F P++G V G I ++ + ++Q+ I ++ Sbjct: 30 LIDKDGVQIQGIMFDSN--KLKFDPQKGDVVEVSGTIQSY--NGQFQVKINNMAKMPE-- 83 Query: 116 LLTALEKRKKKLLEEGLFSDQHKN 139 E+ K L + F + Sbjct: 84 -----EESKDFLPKGN-FDENQLY 101 >gi|15645596|ref|NP_207772.1| exonuclease VII-like protein (xseA) [Helicobacter pylori 26695] gi|2314123|gb|AAD08027.1| exonuclease VII-like protein (xseA) [Helicobacter pylori 26695] Length = 121 Score = 45.9 bits (107), Expect = 0.015, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 43/97 (44%) Query: 236 IANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 + +SAIGHE+D+ L+D ADLRA TP+ A E+ +P + L +L+ Sbjct: 24 YYLARTFSMSAIGHESDFLLSDLVADLRASTPSNAMEILLPNSDEWLQKLDGFNVKLHRS 83 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 L+ K L L L + ++ S L Sbjct: 84 FKILLHQKKAHLEHLADFLEKRNYPVNHSEPGSQALH 120 >gi|260833006|ref|XP_002611448.1| hypothetical protein BRAFLDRAFT_63920 [Branchiostoma floridae] gi|229296819|gb|EEN67458.1| hypothetical protein BRAFLDRAFT_63920 [Branchiostoma floridae] Length = 419 Score = 45.9 bits (107), Expect = 0.017, Method: Composition-based stats. Identities = 22/150 (14%), Positives = 59/150 (39%), Gaps = 12/150 (8%) Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 + P S + R L R + H + +I + +H N+ +++ Sbjct: 270 RTWPISGKFTEPQRQNLRRHQSDPLHQQQNLIRHQLDMLHH----------QQNLIRHQL 319 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EF 429 +L +QQ++ + L + + ++ +LH + ++++ LH + ++ + Sbjct: 320 ELLHQQQNLIRHQLDLLHHQQNLIRHQLELLHHPQNLIRHQLDMLHHQQNLIRHQLELQN 379 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 ++ H++ H + L ++ LK Sbjct: 380 LIRHQLDLLHHQQNPIRHQLDQLHHQQNLK 409 >gi|254779576|ref|YP_003057682.1| putative exonuclease VII, large subunit [Helicobacter pylori B38] gi|254001488|emb|CAX29493.1| Putative exonuclease VII, large subunit [Helicobacter pylori B38] Length = 84 Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats. Identities = 25/78 (32%), Positives = 37/78 (47%) Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 + +SAIGHE+D+ L+D ADLRA TP+ A E+ +P + L +L+ Sbjct: 1 MAKTFSMSAIGHESDFLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLHRSFK 60 Query: 298 RLIKYKINTLNSLLKALP 315 L+ K L L Sbjct: 61 TLLHQKKAHLEHLADFFR 78 >gi|119482906|ref|XP_001261481.1| septin AspB [Neosartorya fischeri NRRL 181] gi|119409636|gb|EAW19584.1| septin AspB [Neosartorya fischeri NRRL 181] Length = 526 Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 84/275 (30%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N + PTG ++ + + R +V + PV + D E + Sbjct: 254 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 313 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251 Q + I R E+ N E++ A+ ++ + +A G + Sbjct: 314 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVTTADGRKVR 371 Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 W + D + ++ E ++ + ++ + Sbjct: 372 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNWLYENYRSDKLTQMGVAQDP 431 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 432 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 491 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 492 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 526 >gi|159123258|gb|EDP48378.1| septin AspB [Aspergillus fumigatus A1163] Length = 526 Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 84/275 (30%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N + PTG ++ + + R +V + PV + D E + Sbjct: 254 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 313 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251 Q + I R E+ N E++ A+ ++ + +A G + Sbjct: 314 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVTTADGRKVR 371 Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 W + D + ++ E ++ + ++ + Sbjct: 372 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNWLYENYRSDKLTQMGVAQDP 431 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 432 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 491 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 492 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 526 >gi|70986973|ref|XP_748972.1| septin AspB [Aspergillus fumigatus Af293] gi|66846602|gb|EAL86934.1| septin AspB [Aspergillus fumigatus Af293] Length = 527 Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 84/275 (30%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N + PTG ++ + + R +V + PV + D E + Sbjct: 255 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 314 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251 Q + I R E+ N E++ A+ ++ + +A G + Sbjct: 315 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVTTADGRKVR 372 Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 W + D + ++ E ++ + ++ + Sbjct: 373 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNWLYENYRSDKLTQMGVAQDP 432 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 433 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 492 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 493 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 527 >gi|318040497|ref|ZP_07972453.1| SMC ATPase superfamily chromosome segregation protein [Synechococcus sp. CB0101] Length = 354 Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 68/239 (28%), Gaps = 17/239 (7%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 ++A A A ++ + + + + + L QTL Sbjct: 31 VQAVNALVAERAAWKEQQQADQAKRSELEERQQELQARFGERRRARDEAEAQLSRQRQTL 90 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + L RL E L + + + Q ++ Sbjct: 91 QQQEWELQRLGEE-LTALAEQERSGALRLEQLQRELPDPLPEIPEDVRENGLEALQAELK 149 Query: 382 --QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 Q + L + + +++ L + R+ L ++L+ RIE + + + ++ Sbjct: 150 SLQARMEALEPVNMLALQELEELEARLADLQERLDVLCKEREELLLRIETVATLRQEAFM 209 Query: 440 TSVSIT--------------TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + LQ ++ L G + + + + +++ + Sbjct: 210 EAFKAVDGHFREIFAGLSDGEGHLQLENPESPLDGGLSLVAHPKGKAVRRLASMSGGEK 268 >gi|224495963|ref|NP_001139073.1| STE20-like serine/threonine-protein kinase [Danio rerio] gi|220675923|emb|CAX14344.1| novel protein similar to vertebrate STE20-like kinase (yeast) (SLK) [Danio rerio] Length = 1201 Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 51/168 (30%), Gaps = 3/168 (1%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 V+ + +E + RL K L L + + Sbjct: 873 QEVENLEKQQKQTIERLEQDHTNRLRDEAKRIKAEQDKELSKFQNMLKNRKKEEQEFLQR 932 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + L+ + + + I I+ D L H Q R + E+ +++ + + + Sbjct: 933 QQQELDGALKKIIQQHKLEIATIERDCLNHKQQLMRAREAAMWELEERHLQEKHQLLKQQ 992 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 K++ M R Q R ++ R+ + ++ + Sbjct: 993 LKDQ---YFMQRHQLLKRHDKEMEQMQGYNQRLIEEMKNRQAQERARL 1037 >gi|110667751|ref|YP_657562.1| RecJ-like exonuclease [Haloquadratum walsbyi DSM 16790] gi|109625498|emb|CAJ51925.1| RecJ-like exonuclease [Haloquadratum walsbyi DSM 16790] Length = 767 Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 13/131 (9%) Query: 2 NPFSQKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNH 61 + + + D S+ LS + S V + GEI + G F L+D Sbjct: 253 SEALNELADDREPVSIDSLSDRVG-------SDVQIEGEIVE--ARQTGGPTVFELRDES 303 Query: 62 SRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALE 121 ++ + + +G + G++ + Q+ L P G +E Sbjct: 304 GTVECAAFVEAGVRAYPDVGDGDIVRLNGEVE--RRRGEIQVETNELTPL-EGAAAETVE 360 Query: 122 -KRKKKLLEEG 131 + L E Sbjct: 361 NRLVDALTAEA 371 >gi|14601265|ref|NP_147800.1| hypothetical protein APE_1221 [Aeropyrum pernix K1] gi|5104896|dbj|BAA80210.1| hypothetical protein [Aeropyrum pernix K1] Length = 356 Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 42/144 (29%), Gaps = 2/144 (1%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L + ++ S R +L + + + RH K D Sbjct: 55 ERFEKLEERQLRLEERFSQLEERQIKLEERFQLLEKRFQRLEERHLRLERRFQKLDERFQ 114 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ + + E+ Q +EQ + L +++ L + R L L Sbjct: 115 RLEQRQLRLEERFQRLEQRFQSLEERY-LRLEQRFQRLEERFRLLEERFQKLEQRQLHLE 173 Query: 425 TRIEFILSHKIKSCHTSVSITTRI 448 R + + ++K Sbjct: 174 ERFQRLEERQLK-LEQRFQKLEER 196 Score = 44.4 bits (103), Expect = 0.054, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 52/154 (33%), Gaps = 8/154 (5%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-RI 357 ++ + + L L Q L RL+ LE + F + ++ Sbjct: 66 RLEERFSQLEERQIKLEERFQLLEKRFQRLEERH----LRLERRFQKLDERFQRLEQRQL 121 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + +++ Q + E+ +EQ ++ L +E+ L + + R L Sbjct: 122 RLEERFQRLEQRFQSLEERYLRLEQRFQRLEERFRL-LEERFQKLEQRQLHLEERFQRLE 180 Query: 418 THIKKLITRIEFILSH--KIKSCHTSVSITTRIL 449 KL R + + K++ + R L Sbjct: 181 ERQLKLEQRFQKLEERHLKLEQRFQRLEEEFRRL 214 Score = 44.0 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 44/130 (33%), Gaps = 5/130 (3%) Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 R +I + +++ R++ L +++ Q + E+ Q +EQ Sbjct: 61 EERQLRLEERFSQLEERQIKLEERFQLLEKRFQRLEERHL--RLERRFQKLDERFQRLEQ 118 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440 + L F +++ L + + R L + L R + + + ++ Sbjct: 119 -RQLRLEERFQRLEQRFQSLEERYLRLEQRFQRLEERFRLLEERFQKLEQRQLHLEERFQ 177 Query: 441 SVSITTRILQ 450 + L+ Sbjct: 178 RLEERQLKLE 187 >gi|301103308|ref|XP_002900740.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262101495|gb|EEY59547.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 594 Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 55/147 (37%), Gaps = 2/147 (1%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 +Q L + L L +L + + ++ ++ L++ ++ R Sbjct: 54 KRKEQFLKKAEGDPISLLNALRTHLRLRFAEQEARQTATARQVHAEDLLNQQREQRTRDQ 113 Query: 375 EKQQHIE-QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 +Q + + +K+ + + ++ R Q +N + ++ ++ +R E Sbjct: 114 LQQLELTCRQLKEQRDSLICQLNQREIDQTQTRRQHQNLLEKMNAQVQDGRSR-EQEAKL 172 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKR 460 + ++ ++ +++ TL+R Sbjct: 173 LVAKQQQEIATLKEAREALSHQKTLER 199 >gi|291295132|ref|YP_003506530.1| RNA binding metal dependent phosphohydrolase [Meiothermus ruber DSM 1279] gi|290470091|gb|ADD27510.1| RNA binding metal dependent phosphohydrolase [Meiothermus ruber DSM 1279] Length = 591 Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats. Identities = 12/175 (6%), Positives = 51/175 (29%), Gaps = 7/175 (4%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 + + + TL + + + + L R +L Sbjct: 26 QRSNRQTEVSKSELEAARREAQQTLEAARRQAQTALEQAQNQAQALLEAARAEAQSLRQN 85 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK------QHLRYIFLEKK 396 + ++ + ++ RQ + E+++ ++ ++ R ++ Sbjct: 86 AQTEIQNLRQNAHVELERLRQQGEERLRQQLREERERLQASLQAEREALMSERASIQAER 145 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 E++ + + + + +++ + K+ + + L++ Sbjct: 146 ERLQADLQASRAEREELKRETERLARRGEQLD-ARAAKLDEQEEKLDALEKTLEA 199 >gi|159902606|ref|YP_001549950.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. MIT 9211] gi|159887782|gb|ABX07996.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. MIT 9211] Length = 1207 Score = 45.5 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 24/229 (10%), Positives = 69/229 (30%), Gaps = 17/229 (7%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + + + + K + L N Q L +++ +RL Sbjct: 894 HIKWREQNQALGVHRKELEKEKQNLETHFGQKRQERDKAEADLANQRQKLQDLQFKFERL 953 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFL-------IHNIQKNRQHILEKQQHIEQIV 384 E+ ++ + + N + + I+ + + + + +E + Sbjct: 954 KEEIL-SVNEELRHSHIRLNELEANLPDPLPDIPEEVRINGLDFIQDQLKNLENRLEALE 1012 Query: 385 KQHLRYIFLE---------KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 ++ + EK+ +L R + R+ + T ++ + Sbjct: 1013 PVNMLALEELEKLESRLFALAEKLEVLTEERSELLLRVETVATLRQEAFMEAFEAVDGYF 1072 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + S+S LQ ++ L+ G T + + + ++ + Sbjct: 1073 REIFASLSEGDGHLQLDNPEDPLEGGLTLVAHPKGKSVRRLAAMSGGEK 1121 >gi|150399109|ref|YP_001322876.1| replication factor A [Methanococcus vannielii SB] gi|150011812|gb|ABR54264.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanococcus vannielii SB] Length = 641 Score = 45.5 bits (106), Expect = 0.022, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 10/73 (13%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS--KYQIIIESLIPSG 112 +LKD+ I +W +F ++G V G + ++ +++ Sbjct: 212 LTLKDSTGSIRVTLW---NELADFEVKKGDYVEVKG----YAKQGYSGLELSADNITIIR 264 Query: 113 SGTLLTAL-EKRK 124 G L +L E K Sbjct: 265 EGQLEESLSENLK 277 >gi|195448509|ref|XP_002071689.1| GK10116 [Drosophila willistoni] gi|194167774|gb|EDW82675.1| GK10116 [Drosophila willistoni] Length = 1733 Score = 45.5 bits (106), Expect = 0.024, Method: Composition-based stats. Identities = 9/168 (5%), Positives = 43/168 (25%), Gaps = 8/168 (4%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + + +AR ++ + L + + + R + Sbjct: 546 EQNPMMMRQITEEQARQQMAQNPMMMQQRQMSEDLARQQAAQNPMMMQQRQMAEEQA--- 602 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 ++ + + + +Q+ + + +QH+ Q + E+ Sbjct: 603 --RQQMSQNPMMMQQRQMAEDLARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEE 660 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHT 440 + + + ++ + + + ++ + Sbjct: 661 QARQQAAQNPMMMQQRQMAEDQARQQMAQNPMMMQQRQMAEDLARQQA 708 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 11/168 (6%), Positives = 46/168 (27%), Gaps = 2/168 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 +MA Q + AR ++ + + + + + R + L Sbjct: 563 QMAQNPMMMQQRQMSEDLARQQAAQNPMMMQQRQMAEEQARQQMSQNPMMMQQRQMAEDL 622 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 R+ + + + + + + + Q+ + ++ + Sbjct: 623 ARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQAR-QQAAQNPMMMQQRQMAED 681 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + M + Q + ++ + + ++ + Sbjct: 682 QARQQMAQNPMMMQQRQMAEDLARQQAAQNPMMMQ-QRQMAEEQARQQ 728 Score = 41.7 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 10/138 (7%), Positives = 41/138 (29%), Gaps = 1/138 (0%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 + Q + +AR + ++ + + + + R + + Sbjct: 629 QMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQARQQAAQNPMMMQQRQMAEDQA-RQQM 687 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 ++ ++ + + + + + Q+ +QQ + + R + + Sbjct: 688 AQNPMMMQQRQMAEDLARQQAAQNPMMMQQRQMAEEQARQQMAQNPMMMQQRQMAEDLAR 747 Query: 398 KIAILHMLREQTKNRIFY 415 + A + + Q + Sbjct: 748 QQAEQNPMMMQQRQMAEE 765 Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats. Identities = 7/156 (4%), Positives = 49/156 (31%), Gaps = 2/156 (1%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTL--NSLLKALPNSDQTLSCSRYRLDRLPR 333 + + + ++ + + + + R + R Sbjct: 604 QQMSQNPMMMQQRQMAEDLARQQVAQMMQQRQMAEEQARQHMAQNPMMMQQRQMAEEQAR 663 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + +++ ++ + ++ + ++ ++ + + +Q ++ Q + Sbjct: 664 QQAAQNPMMMQQRQMAEDQARQQMAQNPMMMQQRQMAEDLARQQAAQNPMMMQQRQMAEE 723 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + ++++A M+ +Q + ++ ++ Sbjct: 724 QARQQMAQNPMMMQQRQMAEDLARQQAEQNPMMMQQ 759 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 16/163 (9%), Positives = 51/163 (31%), Gaps = 2/163 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 MA Q + +AR ++ + + + + R + L Sbjct: 644 HMAQNPMMMQQRQMAEEQARQQAAQNPMMMQQRQMAEDQARQQMAQNPMMMQQRQMAEDL 703 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 R+ +++ ++ ++ + ++ ++ + + +Q EQ + Sbjct: 704 ARQQAAQNPMMMQQRQMAEEQARQQMAQNPMMMQQRQMAEDLA--RQQAEQNPMMMQQRQ 761 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 E++ KI + M + Q ++ ++ + Sbjct: 762 MAEEQAKIQQIQMQQRQMAEEQARQQQQQQQAAQNPTMMMQQR 804 >gi|195472567|ref|XP_002088571.1| GE18639 [Drosophila yakuba] gi|194174672|gb|EDW88283.1| GE18639 [Drosophila yakuba] Length = 696 Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 69/215 (32%), Gaps = 14/215 (6%) Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 + + PV L+ + I K+ TL L + + ++ Sbjct: 213 NSPAVSRSSSPVLRMSTMRYAQLKCQRQEIRRSNNLEKLLTLQRLQRLHQQKRRQMAEVC 272 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 + RL E+ + + + H++ + +L +QQ I + Sbjct: 273 REIARLSVHCVTRNELRLKPRTTSL----SGDHYAHQYHSMGRALSVLLAEQQQIAPLTL 328 Query: 386 QHLRYIFLE---KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + + + + +L RE + R ++++ + L ++ S + Sbjct: 329 YNAQQLTRRIEALSSQQRLLKAERETFRQRNERARQRLEEMREQ-REALQKQLHSQRHRL 387 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 L++ A ++ L++ +D + Q Sbjct: 388 EKERLELRTLAPQH-LEQ-----RDQRRQIVRQVE 416 Score = 40.5 bits (93), Expect = 0.64, Method: Composition-based stats. Identities = 15/177 (8%), Positives = 51/177 (28%), Gaps = 28/177 (15%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 ++ + L + ++ L L I + + + Sbjct: 301 HYAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKA--ERETFRQR 358 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ RQ + E ++ E + KQ +KE++ + + + + R ++++ Sbjct: 359 NERARQRLEEMREQREALQKQLHSQRHRLEKERLELRTLAPQHLEQR-DQRRQIVRQVER 417 Query: 426 RIEFILSHKIKSC-------------------------HTSVSITTRILQSFAYKNT 457 R+ ++ + + + ++L + + Sbjct: 418 RMSTLVLELQEIYNIQNVGGRQFSICGIAFPHMEQYTSESRQAANAQLLDNVSPLAV 474 >gi|15678984|ref|NP_276101.1| hypothetical protein MTH966 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622064|gb|AAB85462.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 444 Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 7/90 (7%) Query: 30 SNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFL 87 VRGE+ + GH +F+L D+ +I+ ++ T KI G Sbjct: 265 ETFGCYRVRGEVIDGPRVIEGGHVFFTLGDDSGQIECGAYEPTKDFRKIILELIPGDVLT 324 Query: 88 VIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 V G I + IE + L Sbjct: 325 VYGGI---GAQGT--MNIEKIHLERLAELY 349 >gi|67920557|ref|ZP_00514077.1| Protein splicing (intein) site [Crocosphaera watsonii WH 8501] gi|67858041|gb|EAM53280.1| Protein splicing (intein) site [Crocosphaera watsonii WH 8501] Length = 450 Score = 45.1 bits (105), Expect = 0.029, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ Y A+ L+D +++ + + T K+ + E +V GK+ Sbjct: 292 EVKQYTTKKGDPMAFLVLEDGSAQVKGVCFPETYKKVREVLTEDSRLIVWGKVD--HRED 349 Query: 100 KYQIIIESLIPS 111 K Q+I+ P Sbjct: 350 KIQLIVNDAEPV 361 >gi|261350689|ref|ZP_05976106.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] gi|288861472|gb|EFC93770.1| conserved hypothetical protein [Methanobrevibacter smithii DSM 2374] Length = 101 Score = 45.1 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 8/76 (10%), Positives = 28/76 (36%), Gaps = 3/76 (3%) Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462 + + + + ++ ++ ++ + S + I L+ L++GY Sbjct: 7 NHVFSNPCQVLDDKFVKMAQIHKSLDAEITKTLDSNENKLRILEEKLKILNPDELLEKGY 66 Query: 463 TSIQDTNNNFITQKRN 478 ++D + I + + Sbjct: 67 -VVKDPDE--IRKSKA 79 >gi|301633176|gb|ADK86730.1| conserved hypothetical protein [Mycoplasma pneumoniae FH] Length = 257 Score = 45.1 bits (105), Expect = 0.030, Method: Composition-based stats. Identities = 13/204 (6%), Positives = 54/204 (26%), Gaps = 19/204 (9%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 + + L + L + Sbjct: 62 CHVWEEELPDGSYDMGFNGNFNHMEKRKSGYVTQKQFSEFKDANNQRLIKIETTLAIQGE 121 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 ++ +++ ++ +++++ + + L + RQ + Sbjct: 122 QINKLTQTVEKQGEQINQLVQVVLLQGEQIRE----------LQVEQKAQRQEFNARMDR 171 Query: 380 IEQIV---KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI------ 430 +E ++ + F + ++ + + +NR+ + + + R++ + Sbjct: 172 LENLLVESIESTNNRFDSMERRLDSMDSRLDSMENRLDSMEGRLDSMENRLDSMEGCLDF 231 Query: 431 LSHKIKSCHTSVSITTRILQSFAY 454 + ++ S T + L Sbjct: 232 VEGRLDSMETRLDSMETRLDKVDP 255 >gi|167523503|ref|XP_001746088.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775359|gb|EDQ88983.1| predicted protein [Monosiga brevicollis MX1] Length = 1357 Score = 45.1 bits (105), Expect = 0.031, Method: Composition-based stats. Identities = 21/218 (9%), Positives = 58/218 (26%), Gaps = 27/218 (12%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 ++ + R+ + + + L + + D L R D L Sbjct: 1016 ASHATAKHSWLVWRQKFETRISQGLQDEVRELEQNATSVDARLQELRELRDTLAARRGEL 1075 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + +++ I +Q + + + + Q+ R ++ Sbjct: 1076 TRGR--------SSLQTALRTPEQIAAMQDQAERVASLRARLSQL-----REQVATRRAA 1122 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 +A Q + R+E + V L++ + Sbjct: 1123 LAEQEEKVAQLDEDVQAKSAEAAAQRARLESLCKEGSAEELARVEGLRSQLETMS----- 1177 Query: 459 KRGYTSIQDTNNN---FITQKRNLATKTRILINFFDGQ 493 G+ ++ + + + TR+ + G Sbjct: 1178 --GWAIVELSEEHRLEVLHTTS----GTRMTVQLQAGT 1209 >gi|9453839|dbj|BAB03273.1| myosin [Chara corallina] Length = 2182 Score = 45.1 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 18/190 (9%), Positives = 66/190 (34%), Gaps = 9/190 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRL 328 + A+ + +L+ ++ + ++ L S ++L + + L R Sbjct: 1004 KKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSEKLNLQLDNRILRQ 1063 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 L + + + R +H ++++ Q + + Q++++ + Sbjct: 1064 QALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1123 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI-------TRIEFILSHKIKSCHTS 441 + K + + + + + +L + + L ++E + S ++ Sbjct: 1124 ALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQH 1183 Query: 442 VSITTRILQS 451 + ++ L++ Sbjct: 1184 LEANSQALRA 1193 Score = 43.2 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 13/153 (8%), Positives = 51/153 (33%), Gaps = 2/153 (1%) Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + +L++L + + + +K Q ++++ + + + Sbjct: 1487 QTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1546 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + ++ ++ + L + + + L + L ++E + S ++ Sbjct: 1547 ALRAENQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQH 1606 Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + ++ L++ TLK+ + + Sbjct: 1607 LEANSQALRAEN--QTLKQQLEQLTSKGGTVVK 1637 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 74/230 (32%), Gaps = 5/230 (2%) Query: 227 FNDEMIVRAIANSSIPIIS-AIGHETDWTLADYAADL--RAPTPTGAAEMAVPVKEHLQS 283 F E + I + GHE D A AA A A++ + E L Sbjct: 931 FAMEGAQAQVEQMKILLAKEREGHEADLAQAKVAAAQLLEAEMSAQASKEVLDKVEALSE 990 Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEI 341 L+ + + + + + L + L+ S ++ L E + Sbjct: 991 ENSKLKELVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSE 1050 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + + + + L Q ++++ + + + + ++ ++ + Sbjct: 1051 KLNLQLDNRILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQD 1110 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 L + + L + L ++E + S ++ + ++ L++ Sbjct: 1111 LQRNLQHLEANSQALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRA 1160 >gi|6472600|dbj|BAA87057.1| unconventional myosin heavy chain [Chara corallina] Length = 2167 Score = 45.1 bits (105), Expect = 0.032, Method: Composition-based stats. Identities = 18/190 (9%), Positives = 66/190 (34%), Gaps = 9/190 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRL 328 + A+ + +L+ ++ + ++ L S ++L + + L R Sbjct: 1004 KKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSEKLNLQLDNRILRQ 1063 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 L + + + R +H ++++ Q + + Q++++ + Sbjct: 1064 QALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1123 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI-------TRIEFILSHKIKSCHTS 441 + K + + + + + +L + + L ++E + S ++ Sbjct: 1124 ALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQH 1183 Query: 442 VSITTRILQS 451 + ++ L++ Sbjct: 1184 LEANSQALRA 1193 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 13/153 (8%), Positives = 51/153 (33%), Gaps = 2/153 (1%) Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + +L++L + + + +K Q ++++ + + + Sbjct: 1487 QTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQ 1546 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + ++ ++ + L + + + L + L ++E + S ++ Sbjct: 1547 ALRAENQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQH 1606 Query: 442 VSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 + ++ L++ TLK+ + + Sbjct: 1607 LEANSQALRAEN--QTLKQQLEQLTSKGGTVVK 1637 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 28/230 (12%), Positives = 74/230 (32%), Gaps = 5/230 (2%) Query: 227 FNDEMIVRAIANSSIPIIS-AIGHETDWTLADYAADL--RAPTPTGAAEMAVPVKEHLQS 283 F E + I + GHE D A AA A A++ + E L Sbjct: 931 FAMEGAQAQVEQMKILLAKEREGHEADLAQAKVAAAQLLEAEMSAQASKEVLDKVEALSE 990 Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPN--SDQTLSCSRYRLDRLPRELEHNLEI 341 L+ + + + + + L + L+ S ++ L E + Sbjct: 991 ENSKLKELVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSE 1050 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + + + + L Q ++++ + + + + ++ ++ + Sbjct: 1051 KLNLQLDNRILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQD 1110 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 L + + L + L ++E + S ++ + ++ L++ Sbjct: 1111 LQRNLQHLEANSQALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRA 1160 >gi|255692855|ref|ZP_05416530.1| exonuclease VII, large subunit domain protein [Bacteroides finegoldii DSM 17565] gi|260621421|gb|EEX44292.1| exonuclease VII, large subunit domain protein [Bacteroides finegoldii DSM 17565] Length = 488 Score = 44.7 bits (104), Expect = 0.032, Method: Composition-based stats. Identities = 61/415 (14%), Positives = 128/415 (30%), Gaps = 53/415 (12%) Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK------YQIIIESLIP 110 L+D ++ + + K+ ++G V G + +++ + Sbjct: 63 LRDEDTQTEITL--QISQKLCSELKDGNLVTVGG---VLGKRVQNNSHIQLMLVVSRVEI 117 Query: 111 SGSGTLLTALEKRKKKLLEEGL------FS--DQHKNPIPFIPKIIAVITSPTGAVIRDI 162 ++ E+++ + + + + K I P++ V + + Sbjct: 118 VQE-QVVDEEEQKRIEFRRKKVQIGYKNIDGVLEQKLFIDERPRVALVFAATS------- 169 Query: 163 LQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIE 222 F + + E AN LKE + D+I L RGGG Sbjct: 170 --ITMSDFNAGINAAKSAIDFYEQRVNFANTKELTALLKELDQQ-KYDVIALVRGGGG-- 224 Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQ 282 + ++ ++ I PII+AIGH + D APTP G + + E + Sbjct: 225 GIESLDELDVLDMIVEMQTPIIAAIGHVEEKLFIKQIVDKEAPTPNGLGQYFSDLVETVS 284 Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 A L I + + ++ K L L+ ++ RL +E Sbjct: 285 EKKNKSRAVLTEQIKKQFQEQLIAAQRQNKELQEKLVFLTKAQEAAQRLHKEQVEVAHRQ 344 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + I E Q + + + E ++K+A + Sbjct: 345 NQELQKKLVGIS-----------------KANEAAQKLHKEQVEVAHKQNQELQKKLAGI 387 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 E + I K L ++ + +++ + + L + + T Sbjct: 388 SKANEDIQ---KAHVEQINKQSKEFNASLK-MMQEINDNLNKSLQKLTAQNTQAT 438 >gi|126659690|ref|ZP_01730819.1| DNA polymerase III subunit alpha [Cyanothece sp. CCY0110] gi|126619035|gb|EAZ89775.1| DNA polymerase III subunit alpha [Cyanothece sp. CCY0110] Length = 452 Score = 44.7 bits (104), Expect = 0.032, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ Y A+ L+D ++++ + + T +I + E +V GK+ Sbjct: 292 EVKQYTTKKGDQMAFLVLEDGSAQVEGVCFPETYKRIREVLIEDSRLIVWGKVDY--RDD 349 Query: 100 KYQIIIESLIPS 111 K Q+I+E P Sbjct: 350 KVQLIVEDAEPV 361 >gi|315924481|ref|ZP_07920702.1| DNA polymerase III PolC [Pseudoramibacter alactolyticus ATCC 23263] gi|315622185|gb|EFV02145.1| DNA polymerase III PolC [Pseudoramibacter alactolyticus ATCC 23263] Length = 1442 Score = 44.7 bits (104), Expect = 0.034, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Query: 55 FSLKDNHSRIDAIIWKGTLNK-IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 F++ D + I I+ G I+ + GI V G+++ + + Q++ + Sbjct: 271 FNITDERASISCKIFVGKNASAIKERLKNGIWVQVEGQVSFDEYAHEKQLMPRVIE 326 >gi|257454406|ref|ZP_05619668.1| SMC domain protein [Enhydrobacter aerosaccus SK60] gi|257448172|gb|EEV23153.1| SMC domain protein [Enhydrobacter aerosaccus SK60] Length = 1215 Score = 44.7 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 12/159 (7%), Positives = 40/159 (25%), Gaps = 5/159 (3%) Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + L N L ++ + + E I H +++ Sbjct: 656 QTSAQQLILCNQQLLINLSHLLQAEGQQV--ISFSQQLMNEARIEELDEHLAQQQPQLQR 713 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + Q + L + +++ + +++ Sbjct: 714 LANRLQQARVSLQEWQAQDRTARNQLLSLTQQQQQCQQQKLQQQYRYQSALDKLTQDKKR 773 Query: 420 IKKLITRIEFI---LSHKIKSCHTSVSITTRILQSFAYK 455 + R++ + K++ V + L + Sbjct: 774 LDSDSERLQQEGLGFADKLQQEQQRVYELSNTLSHLQPQ 812 Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 45/176 (25%), Gaps = 7/176 (3%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 ++ + + + + + S L L + L RL + Sbjct: 728 WQAQDRTARNQLLSLTQQQQQCQQQKLQQQYRYQSALDKLTQDKKRLDSDSERLQQEGLG 787 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLI-HNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 L+ R Y + N + RQ + E+ ++ + Sbjct: 788 FADKLQQEQQRVY----ELSNTLSHLQPQLQQQISERQSLDERLNQFASQQRELEQQQNR 843 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + L + + +LSHKI + + L Sbjct: 844 ITQTLATGQLQITASEQQLAKALQDQARFTSE--QQLLSHKISEHKARLPQLQQQL 897 >gi|256079311|ref|XP_002575932.1| myosin heavy chain IIb [Schistosoma mansoni] gi|238661186|emb|CAZ32167.1| Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B), putative [Schistosoma mansoni] Length = 1955 Score = 44.7 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 83/264 (31%), Gaps = 16/264 (6%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 + I + + +++ + + D L + +A A A + + Sbjct: 758 DVYCIGHSKIFFKVGVLAQLEEDRDIHLTNSIIKFQAYARGYLARRAKEQRIQNIQASKI 817 Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 ++ + + + L + ++ L ++ ++E + + Sbjct: 818 IQRNCDAYLKLRNWPWWRLFTKVRPLLTVTRQEDLVAVKEEELRKIREQMEKVVNELNEM 877 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + +I+ + + + Q++ ++ + + ++ + + + Sbjct: 878 QRSYEKLSNEKIQLNAELQQEHDSNQNLQTERDRLREKLQTLEEDYME-LENRDSEEKSK 936 Query: 406 REQTKNRIFYLHTHIKKLITRIE--FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + L I L ++E K++ TS+ L GY Sbjct: 937 LHNLEAEQKRLLEQISDLSDQLELEEQQRQKLQVEKTSIEQKVSQLND---------GYV 987 Query: 464 SIQDTNNNFITQKRNLATKTRILI 487 SI+D N + K+ L RI + Sbjct: 988 SIEDKYNKLVKDKKQLT--DRIDL 1009 >gi|256079309|ref|XP_002575931.1| myosin heavy chain type B [Schistosoma mansoni] gi|238661185|emb|CAZ32166.1| Myosin-10 (Myosin heavy chain, nonmuscle IIb) (Nonmuscle myosin heavy chain IIb) (NMMHC II-b) (NMMHC-IIB) (Cellular myosin heavy chain, type B) (Nonmuscle myosin heavy chain-B) (NMMHC-B), putative [Schistosoma mansoni] Length = 1961 Score = 44.7 bits (104), Expect = 0.035, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 83/264 (31%), Gaps = 16/264 (6%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 + I + + +++ + + D L + +A A A + + Sbjct: 764 DVYCIGHSKIFFKVGVLAQLEEDRDIHLTNSIIKFQAYARGYLARRAKEQRIQNIQASKI 823 Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 ++ + + + L + ++ L ++ ++E + + Sbjct: 824 IQRNCDAYLKLRNWPWWRLFTKVRPLLTVTRQEDLVAVKEEELRKIREQMEKVVNELNEM 883 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + +I+ + + + Q++ ++ + + ++ + + + Sbjct: 884 QRSYEKLSNEKIQLNAELQQEHDSNQNLQTERDRLREKLQTLEEDYME-LENRDSEEKSK 942 Query: 406 REQTKNRIFYLHTHIKKLITRIE--FILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 + L I L ++E K++ TS+ L GY Sbjct: 943 LHNLEAEQKRLLEQISDLSDQLELEEQQRQKLQVEKTSIEQKVSQLND---------GYV 993 Query: 464 SIQDTNNNFITQKRNLATKTRILI 487 SI+D N + K+ L RI + Sbjct: 994 SIEDKYNKLVKDKKQLT--DRIDL 1015 >gi|118350336|ref|XP_001008449.1| hypothetical protein TTHERM_00019670 [Tetrahymena thermophila] gi|89290216|gb|EAR88204.1| hypothetical protein TTHERM_00019670 [Tetrahymena thermophila SB210] Length = 1164 Score = 44.7 bits (104), Expect = 0.036, Method: Composition-based stats. Identities = 15/169 (8%), Positives = 52/169 (30%), Gaps = 6/169 (3%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 + L++ E + + +L + +L + E Sbjct: 754 FDELRTQTKEYEQSITELTQQLEDANQKLILEKQLHETKILTLNQQQEVEKMQLKSDYEQ 813 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 +I + + + I+ L + + Q + ++ + +Q++ +K + Sbjct: 814 QKSELIQQHNQTAQRLQKEIE--SLNQQMTQMAQELKQQHEQEKQVLIDQHNRAIQDKNQ 871 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKL----ITRIEFILSHKIKSCHTSV 442 +I +L ++ ++ ++ + + KI + + Sbjct: 872 EIQVLEQRIQELLVQLEKQKAQLQMQFEEEKRILNQEMQQKIDELNQRL 920 >gi|319935864|ref|ZP_08010290.1| hypothetical protein HMPREF9488_01121 [Coprobacillus sp. 29_1] gi|319809131|gb|EFW05612.1| hypothetical protein HMPREF9488_01121 [Coprobacillus sp. 29_1] Length = 1018 Score = 44.7 bits (104), Expect = 0.040, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 8/110 (7%) Query: 1 MNPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+P K L+ P +VS L ++ V + V+ + D Sbjct: 913 MHPIELMKEKLNTPYINVSSLYEYVNQTVNIVVQLQRVK----NITDRKGDEMCFIEGFD 968 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 +D +++ I + ++G L+ GK+ K I++ Sbjct: 969 ETGSVDGVVFASRYKSIGMMLKKGNICLMNGKVDM---KDKLSFIVDKAR 1015 >gi|297567937|ref|YP_003686907.1| Exonuclease VII, large subunit [Meiothermus silvanus DSM 9946] gi|296852386|gb|ADH65399.1| Exonuclease VII, large subunit [Meiothermus silvanus DSM 9946] Length = 305 Score = 44.7 bits (104), Expect = 0.041, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 12/130 (9%) Query: 147 IIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTC 206 + +I + G V D+ + + R Q +E I L + E Sbjct: 139 RLLLIYAYEGIVDHDVEKALGDR--------RAAYQIEE--HRIRFTPEALASHLEQADL 188 Query: 207 PRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPT 266 I + RGGGS L F+ +V A+ P I+AIGH D TL AAD R T Sbjct: 189 RGYAAIGIVRGGGS--GLEVFDHPQLVEAVLGMRTPFIAAIGHAKDQTLVAAAADWRVET 246 Query: 267 PTGAAEMAVP 276 P+ Sbjct: 247 PSLLGTRLGE 256 >gi|322787446|gb|EFZ13534.1| hypothetical protein SINV_05789 [Solenopsis invicta] Length = 1574 Score = 44.7 bits (104), Expect = 0.042, Method: Composition-based stats. Identities = 22/210 (10%), Positives = 60/210 (28%), Gaps = 8/210 (3%) Query: 248 GHETD-WTLAD-YAADLRAPTPTGA----AEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 GHE T+AD AD + A + ++ + A + + Sbjct: 875 GHEGLGKTMADRLLADRQHYDNNRAFREQEMRIQEHRMAAMQAVEHRLAVAAAAQHQRDR 934 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L L + + + RL + + + + ++ + Sbjct: 935 DRERDLVHLREKEEHRLHREKELQQLEHRLAVQHHQHRDKDLQQQEHRLAQQREK-DMHV 993 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH-I 420 + +Q + QH ++ R + ++ A + + + I Sbjct: 994 EHARLCSVQQVREKDMQHDHRLSVHQQREKEIHQQMVAAAQREKEHEHRLAVQQQREKEI 1053 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQ 450 ++ R+ H+ + +++ Sbjct: 1054 QQQEQRLAIQQQHEKEHAERRLAMQQAHRD 1083 >gi|195995537|ref|XP_002107637.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens] gi|190588413|gb|EDV28435.1| hypothetical protein TRIADDRAFT_51343 [Trichoplax adhaerens] Length = 7662 Score = 44.4 bits (103), Expect = 0.043, Method: Composition-based stats. Identities = 18/176 (10%), Positives = 54/176 (30%), Gaps = 1/176 (0%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIF 344 + L++ L + N + K + L R R +L R+ E ++ + Sbjct: 6998 EEFQKMLDDHEKELESMQQNQEIEIAKHRDQLNSKLEERRRRKQQQLARKQEIEMQKKLL 7057 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 ++ + + ++ + + + + E ++L Y ++++ L Sbjct: 7058 QQQAEADRLNAEREAKKEDAALAETIKELKNSDNENESKRAENLIYHVMQQRHAKETLQH 7117 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + K L + T+ + ++ ++ + R Sbjct: 7118 EEQLKKELATALAEAQNNVATKCQDNRDKLVEQHEHQLAELLAHSDGISPLELKSR 7173 >gi|87311203|ref|ZP_01093326.1| CMP-binding protein [Blastopirellula marina DSM 3645] gi|87286111|gb|EAQ78022.1| CMP-binding protein [Blastopirellula marina DSM 3645] Length = 324 Score = 44.4 bits (103), Expect = 0.043, Method: Composition-based stats. Identities = 10/72 (13%), Positives = 29/72 (40%), Gaps = 6/72 (8%) Query: 41 ISGYRGIH-SSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPG 97 +S + G+ Y ++ D +++ ++W + + ++G + G + Sbjct: 21 VSNKQLRPNRQGNLYLQMQIGDKSGQVNGMMW-NANDHVYRKFDDGDYVRIQGTSQFY-- 77 Query: 98 SSKYQIIIESLI 109 + QII+ + Sbjct: 78 NGAMQIIVSGIE 89 >gi|332822639|ref|XP_518098.3| PREDICTED: serine/threonine-protein kinase 10 [Pan troglodytes] Length = 1350 Score = 44.4 bits (103), Expect = 0.043, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 1096 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 1153 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 1154 ELLRKHEKEREQMQRYNQRMTEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 1213 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 1214 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 1273 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 1274 VEHETQKLKALD 1285 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 11/135 (8%), Positives = 44/135 (32%), Gaps = 1/135 (0%) Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + Q + + L R+ + + + R D + K Sbjct: 1054 PRQQRKESMKQKMEEHTQKKQLLDRDFVAKQKEDLELAMKRLTTDNRREICDKERECLMK 1113 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + +++ + ++ + L+ K+++ + R + + +++ R+ Sbjct: 1114 KQELLRDREAALWEMEEHQLQERHQLVKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRM 1173 Query: 428 EFILSHKIKSCHTSV 442 L + + + Sbjct: 1174 TEQLKVRQQQEKARL 1188 >gi|229824039|ref|ZP_04450108.1| hypothetical protein GCWU000282_01343 [Catonella morbi ATCC 51271] gi|229786393|gb|EEP22507.1| hypothetical protein GCWU000282_01343 [Catonella morbi ATCC 51271] Length = 1116 Score = 44.4 bits (103), Expect = 0.044, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Query: 35 VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 V V+G I A+ L+D + I +++ + L +EG LV G + Sbjct: 953 VLVKG-IRVINTKKQELMAFLELEDEVASISGVVFPQSYRHYVSLLKEGQVLLVEGTVEL 1011 Query: 95 FPGSSKYQIIIESLIPSGS 113 ++Q+II+ L P Sbjct: 1012 -DRQGRHQLIIKRLSPVNE 1029 >gi|218506153|ref|ZP_03504031.1| exodeoxyribonuclease VII large subunit [Rhizobium etli Brasil 5] Length = 43 Score = 44.4 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 15/45 (33%), Gaps = 4/45 (8%) Query: 485 ILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 I I F DG+ A+ + K + QG LF Sbjct: 3 IAIEFADGRVGAMTTEGGSAP----ASAKKRGAKPAEPTKQGSLF 43 >gi|332158053|ref|YP_004423332.1| hypothetical protein PNA2_0411 [Pyrococcus sp. NA2] gi|331033516|gb|AEC51328.1| hypothetical protein PNA2_0411 [Pyrococcus sp. NA2] Length = 460 Score = 44.4 bits (103), Expect = 0.045, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 18/114 (15%) Query: 22 YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75 +K I +V VRG+++ + H +F L+D +I ++ + K Sbjct: 295 KKVKDI--RLYDNVIVRGKVAS-KYWEKGRHVFFELEDETGKIRVAAFEPTKKFRNYVRK 351 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + G E +V G + I +E L P L+ +E RK K + Sbjct: 352 LIP----GDEVIVAGGVK--EHEGVLTINLEKLYPV---KLVPKVEYRKPKCPK 396 >gi|114588411|ref|XP_001153727.1| PREDICTED: pleckstrin homology-like domain, family B, member 2 isoform 5 [Pan troglodytes] Length = 1277 Score = 44.4 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 674 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 733 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 734 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 791 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 792 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 850 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 851 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 902 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 903 KEHFRSLEERKKQ 915 >gi|189537765|ref|XP_001920876.1| PREDICTED: ankyrin repeat domain-containing protein 26 [Danio rerio] Length = 2319 Score = 44.4 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 13/163 (7%), Positives = 40/163 (24%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + R + L L + + L + + E Sbjct: 2022 QQLKEKLKSRSRSQEQTERRQLEDELLSLRRQLEAGVMDQSQAEQYRRDTEERARQEIRH 2081 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + +++ + + E Q + L + + ++ Sbjct: 2082 KLEEVNLFLQTQAASQEALEQMKAANESSQRAHLEQRIRDLEAELSRSRSVQQDSQIQRD 2141 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + R+ L+ K+ + ++ L S Sbjct: 2142 SSQSELQRYKQLYGEELRLRKSLAAKLDRSNERLAEANTKLLS 2184 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 48/192 (25%), Gaps = 19/192 (9%) Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + ++++ T L L + +R + + H Sbjct: 1472 LSAKLEHERQTRQQLEAEAEAGRARLQAAIQEAERCQASRTEAERSLQRDREEHQRMQEK 1531 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 I + ++ L K + + L EK +L L + + Sbjct: 1532 HIFESGTQRDTIQSLSQKLSKSEARANSFENECHRNALTLAEKAVLLETLAREKDQALSK 1591 Query: 416 LHT-HIKKLITR--------IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQ 466 L L R + ++ + ++ + L+ L +G Sbjct: 1592 LKELEATVLNERDQTSRAGAKHEAMQERLAQAQSEAALLRQQLE-----EALNKG----- 1641 Query: 467 DTNNNFITQKRN 478 + +T Sbjct: 1642 SAKDKAVTDVHQ 1653 >gi|114588413|ref|XP_516644.2| PREDICTED: pleckstrin homology-like domain, family B, member 2 isoform 7 [Pan troglodytes] Length = 1250 Score = 44.4 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 876 KEHFRSLEERKKQ 888 >gi|150395374|ref|YP_001325841.1| peptidoglycan binding domain-containing protein [Sinorhizobium medicae WSM419] gi|150026889|gb|ABR59006.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium medicae WSM419] Length = 1226 Score = 44.4 bits (103), Expect = 0.046, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 97/340 (28%), Gaps = 34/340 (10%) Query: 116 LLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVI 175 L + + K + ++ F++ ++ I + I + D L+ + Sbjct: 147 LRSEIRGIKAEAAQDRRFAEDVRDDIERLSAGIKELGRQASPAEADALR-------IEFD 199 Query: 176 IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFN----DEM 231 ++G + + + N G + L F+ DE+ Sbjct: 200 ELRAMLEGLAREESMRRMENRWN--------------------GVEDRLNAFDQNRDDEL 239 Query: 232 IVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 + A I I+++ + + + A P L+ Sbjct: 240 VALAYRLDEIKAQINSLDKGSAVEVLEGKLVAVAKAIEMLGRQIQPDDRRFAPQFAGLDR 299 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 RL+ I + N + + + L+ ++D L + L I Sbjct: 300 RLDEISRAIAADDRNVAGADGSFVERLEGRLTDLSRQIDSLSVRGDSGLGARIEALAARV 359 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + + + L + + + +Q E + H + ++ + + + Sbjct: 360 EDLASEKAAARLEERLDQLSAVLEHSRQGAEPDLTDH--LADISRRIEALSEYSVNNGLA 417 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 R+ L I+ L E + ++ L+ Sbjct: 418 ERLDDLARRIEGLAPHAEPTADRRFDRLEDRLAGIAERLE 457 >gi|297670370|ref|XP_002813345.1| PREDICTED: pleckstrin homology-like domain family B member 2-like isoform 1 [Pongo abelii] gi|297670372|ref|XP_002813346.1| PREDICTED: pleckstrin homology-like domain family B member 2-like isoform 2 [Pongo abelii] Length = 1253 Score = 44.4 bits (103), Expect = 0.048, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 876 KEHFRSLEERKKQ 888 >gi|326435459|gb|EGD81029.1| hypothetical protein PTSG_10972 [Salpingoeca sp. ATCC 50818] Length = 1209 Score = 44.4 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 13/172 (7%), Positives = 47/172 (27%), Gaps = 4/172 (2%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 + ++ + Q L + + Sbjct: 600 HWQQQRVRAAQVEVAACQHEGWLVWSAWRRWHGAWRQQLQLQHVYTCAAAAHERWAVAVA 659 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 R F H + + +H ++ +Q + + + + H+R L + + Sbjct: 660 WRRWQGRFQHRQHI--ASVAVHVTRQQQQRLESRVWDRWRALTAHMRTQRLSTRRAMQQR 717 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCHTSVSITTRILQSF 452 H+ ++ ++ + + + ++ ++++ T Q+ Sbjct: 718 HLQLQRRYLHLWRARCNAARQAAGHHNAAVMRTALRRMQSALAHTRAKQQAL 769 >gi|62089392|dbj|BAD93140.1| LL5 beta protein variant [Homo sapiens] Length = 1259 Score = 44.4 bits (103), Expect = 0.049, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 653 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 712 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 713 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 770 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 771 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 829 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 830 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 881 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 882 KEHFRSLEERKKQ 894 >gi|27650425|emb|CAD42711.1| LL5 beta protein [Homo sapiens] Length = 1253 Score = 44.4 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 876 KEHFRSLEERKKQ 888 >gi|197313730|ref|NP_001127910.1| pleckstrin homology-like domain family B member 2 isoform a [Homo sapiens] gi|197313732|ref|NP_001127911.1| pleckstrin homology-like domain family B member 2 isoform a [Homo sapiens] gi|84029396|sp|Q86SQ0|PHLB2_HUMAN RecName: Full=Pleckstrin homology-like domain family B member 2; AltName: Full=Protein LL5-beta gi|119600096|gb|EAW79690.1| pleckstrin homology-like domain, family B, member 2, isoform CRA_a [Homo sapiens] gi|148744368|gb|AAI42679.1| PHLDB2 protein [Homo sapiens] gi|152012502|gb|AAI50211.1| PHLDB2 protein [Homo sapiens] gi|168278024|dbj|BAG10990.1| pleckstrin homology-like domain family B member 2 [synthetic construct] Length = 1253 Score = 44.4 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLASQPQS 875 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 876 KEHFRSLEERKKQ 888 >gi|147919533|ref|YP_686727.1| phosphoesterase (RecJ-like) [uncultured methanogenic archaeon RC-I] gi|110622123|emb|CAJ37401.1| predicted phosphoesterase (RecJ-like) [uncultured methanogenic archaeon RC-I] Length = 702 Score = 44.4 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 8/99 (8%) Query: 35 VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW--KGTLNKIEFLPEEGIEFLVIGKI 92 V + GEI + +SG F++ D + + G + E+ V G+I Sbjct: 206 VSISGEIVQVKQ--TSGPTIFTVADEEGSVSCAAFVEAGQRAFPDVGLED--MVKVTGEI 261 Query: 93 TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEG 131 T ++ Q+ + + G + + + Sbjct: 262 T--KRNNGLQLEVLDMKKLSDGDAAQVRKVIEDAIEARA 298 >gi|227494166|ref|ZP_03924482.1| single-stranded DNA-binding protein [Actinomyces coleocanis DSM 15436] gi|226831900|gb|EEH64283.1| single-stranded DNA-binding protein [Actinomyces coleocanis DSM 15436] Length = 202 Score = 44.4 bits (103), Expect = 0.050, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 29/72 (40%), Gaps = 12/72 (16%) Query: 48 HSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQ-- 102 +SG KD + + +W+ + +G+ +V G++ ++ G Q Sbjct: 42 RASGQW----KDGDALFMRCSVWREFAENVADSLSKGMRVVVQGRLIQRSYEGRDGSQRT 97 Query: 103 ---IIIESLIPS 111 + ++ + PS Sbjct: 98 SVELQVDEIGPS 109 >gi|307320679|ref|ZP_07600092.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti AK83] gi|306893714|gb|EFN24487.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti AK83] Length = 1220 Score = 44.4 bits (103), Expect = 0.051, Method: Composition-based stats. Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 7/240 (2%) Query: 216 RGGGSIEDLWHFN----DEMIVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGA 270 R G + L F+ DE++ A I I+++ + + A Sbjct: 221 RWTGVEDRLNAFDQNRDDELVALAYRLDEIKAQINSLDRGAGVEVLESKLVAVAQAIEML 280 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 P + L +L+ RL+ I + N + + + L ++D Sbjct: 281 GRQIQPDERRLAPQFADLDRRLDEISRAIAAGSRNVAGTDGSFVDRLENRLGDLSRQIDT 340 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 L ++ L I + + L + + + K R Sbjct: 341 LSNPVDSGLGARIEALAARVEDLAGEKAAARLEERLDQLSAVL--KHNRPGAEPDLTDRL 398 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + +K + + + R+ L I L +E + ++ + L+ Sbjct: 399 ADISRKIEALSGDSITDALAERLDDLARRIDGLAGNVEPSADTRFDRLEDRLAGIAQRLE 458 >gi|310794463|gb|EFQ29924.1| myb-like DNA-binding domain-containing protein [Glomerella graminicola M1.001] Length = 2384 Score = 44.0 bits (102), Expect = 0.056, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 51/148 (34%), Gaps = 1/148 (0%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + + R + +R + +E + R + R + + Sbjct: 1682 EPAQQRPLAAAQPIQPAQPEPQVDRQQAERQQQMERQAIERQQIERQRLEQQQLERQQIE 1741 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 Q+ + +E+QQ Q +++ ++++I + R+Q + + Sbjct: 1742 RQQIERQQIERQQIERQQIERQQIERQQIERQQIERQQIERQQIERQQMERQQIERQQLE 1801 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRI 448 ++ I R + I +++ R Sbjct: 1802 RQAIER-QQIERQQLERQQMERQQAERQ 1828 >gi|326485094|gb|EGE09104.1| cell division control protein 3 [Trichophyton equinum CBS 127.97] Length = 542 Score = 44.0 bits (102), Expect = 0.057, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 94/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 228 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 287 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 288 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 345 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ ++SA G + W + D Sbjct: 346 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVVSADGRKVRGRRYPWGVIEVDNEEHCD 405 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + ++ + ++ + ++ + Sbjct: 406 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 465 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + + + + RQ + EK+ +E Sbjct: 466 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 525 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 526 SGRPLEDKIKRKGFSLR 542 >gi|56421279|ref|YP_148597.1| DNA-directed DNA polymerase III subunit alpha [Geobacillus kaustophilus HTA426] gi|56381121|dbj|BAD77029.1| DNA-directed DNA polymerase III alpha subunit [Geobacillus kaustophilus HTA426] Length = 1091 Score = 44.0 bits (102), Expect = 0.058, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 +F++ D ++A+ + + + +EG L+ G I + Q+II + Sbjct: 962 FFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEV--RGGRRQLIIRRAERLTA 1019 Query: 114 GTLL 117 L Sbjct: 1020 SALY 1023 >gi|326803733|ref|YP_004321551.1| DNA polymerase III, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651141|gb|AEA01324.1| DNA polymerase III, alpha subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 1124 Score = 44.0 bits (102), Expect = 0.060, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%) Query: 33 SHVCVRGEISGYRGIHSSG---HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89 S V + GEI + I + A+ +L+D HS ++ I + EG++ LV Sbjct: 956 SQVTIIGEIVKVKRIQTKKNQPMAFLTLRDEHSEVEVIAFPKAYIDFAAYIREGLQVLVQ 1015 Query: 90 GKITTFPGSSKYQIIIESLIP 110 GK T Q++++ P Sbjct: 1016 GKTQT-RKQG-LQVVLDQCQP 1034 >gi|29565980|ref|NP_817551.1| gp102 [Mycobacterium phage Cjw1] gi|194303395|ref|YP_002014420.1| gp99 [Mycobacterium phage Porky] gi|29424705|gb|AAN01716.1| gp102 [Mycobacterium phage Cjw1] gi|194150880|gb|ACF33916.1| gp99 [Mycobacterium phage Porky] Length = 146 Score = 44.0 bits (102), Expect = 0.061, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 5/53 (9%) Query: 41 ISGYRGIHSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 +S R + G+ D + + IW+ + ++G +V G + Sbjct: 34 VSNERRRDAQGNW----VDGDATFLRCTIWRDAAENVAESLQKGQRVIVHGYL 82 >gi|109302854|ref|YP_654856.1| gp101 [Mycobacterium phage 244] gi|194303153|ref|YP_002014568.1| gp100 [Mycobacterium phage Kostya] gi|88910145|gb|ABD58076.1| gp101 [Mycobacterium phage 244] gi|194153201|gb|ACF34267.1| gp100 [Mycobacterium phage Kostya] gi|255928420|gb|ACU42036.1| gp102 [Mycobacterium phage Pumpkin] Length = 146 Score = 44.0 bits (102), Expect = 0.063, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 5/53 (9%) Query: 41 ISGYRGIHSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 +S R + G+ D + + IW+ + ++G +V G + Sbjct: 34 VSNERRRDAQGNW----VDGDATFLRCTIWRDAAENVAESLQKGQRVIVHGYL 82 >gi|55379177|ref|YP_137027.1| hypothetical protein rrnAC2518 [Haloarcula marismortui ATCC 43049] gi|55231902|gb|AAV47321.1| unknown [Haloarcula marismortui ATCC 43049] Length = 406 Score = 44.0 bits (102), Expect = 0.063, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 4/64 (6%) Query: 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW---KGTLNKIEFLPEEGIEFLVI 89 S V G + + GH + +L+ + + +D + KG N++ + G Sbjct: 251 SAYRVTGTVVEASETRAGGHVFLTLEGDGATLDCAAFEPTKGFRNRVR-SLKAGDRITAC 309 Query: 90 GKIT 93 G++T Sbjct: 310 GEVT 313 >gi|254414734|ref|ZP_05028499.1| hypothetical protein MC7420_3755 [Microcoleus chthonoplastes PCC 7420] gi|196178582|gb|EDX73581.1| hypothetical protein MC7420_3755 [Microcoleus chthonoplastes PCC 7420] Length = 1412 Score = 44.0 bits (102), Expect = 0.064, Method: Composition-based stats. Identities = 16/157 (10%), Positives = 51/157 (32%), Gaps = 11/157 (7%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + N L + + + R L++ +L L + + + + + Sbjct: 190 NDEFNQLQTQVAEEAKRQADIEQERRELEQQQHQLTSTLAQLQDQIAAQEIQLQEQAELT 249 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLR------YIFLEKKEKIAILHMLREQTKNRIF 414 ++++ RQ + + ++ + + +E + + + Q +++I Sbjct: 250 AQNQHLEQERQRLHHQIGKLQHQETDLNQSLARIAAQEQQAQENLNLYQIQLNQLQDQIA 309 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 T +L + ++ + I L+S Sbjct: 310 AQETQTSQLSQELAD-----LEQQRHQLEIYISNLES 341 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 11/156 (7%), Positives = 48/156 (30%), Gaps = 6/156 (3%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + ++ ++ + L ++ + R+ + + Sbjct: 117 EQLQTQVATQQRHKQELERAIASLTRQKQELEQDSAQLHTQLQARQDQETTLNYSLSAIA 176 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ N + ++ ++ V + + ++E+ L + Q + + L I Sbjct: 177 AEKQRVEANIASLNDEFNQLQTQVAEEAKRQADIEQER-RELEQQQHQLTSTLAQLQDQI 235 Query: 421 KKLITRIE-----FILSHKIKSCHTSVSITTRILQS 451 +++ + ++ + LQ Sbjct: 236 AAQEIQLQEQAELTAQNQHLEQERQRLHHQIGKLQH 271 >gi|326469758|gb|EGD93767.1| septin [Trichophyton tonsurans CBS 112818] Length = 523 Score = 44.0 bits (102), Expect = 0.065, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 94/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 209 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 268 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 269 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 326 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ ++SA G + W + D Sbjct: 327 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVVSADGRKVRGRRYPWGVIEVDNEEHCD 386 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + ++ + ++ + ++ + Sbjct: 387 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 446 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + + + + RQ + EK+ +E Sbjct: 447 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 506 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 507 SGRPLEDKIKRKGFSLR 523 >gi|198458447|ref|XP_001361047.2| GA17478 [Drosophila pseudoobscura pseudoobscura] gi|198136346|gb|EAL25623.2| GA17478 [Drosophila pseudoobscura pseudoobscura] Length = 1476 Score = 44.0 bits (102), Expect = 0.066, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 55/140 (39%), Gaps = 1/140 (0%) Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + N ++ L+ + L L + + + + R + ++S+ + +N Sbjct: 970 QRVKTNLERDLAEQQQHLLELRERQREHEQQVKDQSERCTELEASHLESESQLQATIQNL 1029 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + ++ + EQ V++ ++ + + ++A L + LH L ++ Sbjct: 1030 RQQIDAFRLTEQGVQEKMQATSVAQASQMATLEARWSAANADVERLHEANDALQLAMDQ- 1088 Query: 431 LSHKIKSCHTSVSITTRILQ 450 S +++ +++ R L+ Sbjct: 1089 QSQRLEELQETLAQKDRQLE 1108 >gi|194676794|ref|XP_001787994.1| PREDICTED: A-kinase anchor protein 13 [Bos taurus] Length = 1017 Score = 44.0 bits (102), Expect = 0.070, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 6/133 (4%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEK 376 DQ L S L R +E R + ++ H +K R + E Sbjct: 642 DQKLLLSERALTRTASRPSSLIEQEKQRSLEKQRQDLANLQRQQAQHQEEKRRHEREWES 701 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 ++ Q + L E + L RE+ + R +++L +++ Sbjct: 702 RERALQEREARLAQREDELRRSCQDLEREREELQQRKGAYQGDLERL-----RAAQRQLE 756 Query: 437 SCHTSVSITTRIL 449 + + L Sbjct: 757 REQEQLRRDSERL 769 >gi|304313942|ref|YP_003849089.1| hypothetical protein MTBMA_c01670 [Methanothermobacter marburgensis str. Marburg] gi|302587401|gb|ADL57776.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 130 Score = 44.0 bits (102), Expect = 0.071, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 14/115 (12%) Query: 6 QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRID 65 SL P VS+L +++ + V G + + SG + D + Sbjct: 25 SSASLTPPVVRVSDLDRA---MMDRE---ITVEGTVMAVHELE-SGTLLLKINDGTGTVT 77 Query: 66 AIIWKGTLNKIEFLPE--EGIEFLVIGKITTFPGSSKYQIIIE---SLIPSGSGT 115 A+ +K +E PE G+ V G++ + +I++E S++P G+ Sbjct: 78 AVAFKSVSKDMELSPEILSGMRIQVTGRVKEYH--GSLEIVVEKPSSIMPKSFGS 130 >gi|289811727|ref|ZP_06542356.1| exodeoxyribonuclease VII large subunit [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 120 Score = 43.6 bits (101), Expect = 0.073, Method: Composition-based stats. Identities = 7/90 (7%), Positives = 32/90 (35%), Gaps = 2/90 (2%) Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 ++ + + + + +Q + ++ ++ ++ L ++ + RI + Sbjct: 31 LQQQHPQLRLARQQTALERLRQRMGFALEARIKQATQRQQRVSQRLS--QQNPQPRIHRV 88 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + I++L R+ + ++ Sbjct: 89 QSRIQQLEYRLTENIRSRLSEQRERFGNAV 118 >gi|302661429|ref|XP_003022382.1| hypothetical protein TRV_03446 [Trichophyton verrucosum HKI 0517] gi|291186325|gb|EFE41764.1| hypothetical protein TRV_03446 [Trichophyton verrucosum HKI 0517] Length = 537 Score = 43.6 bits (101), Expect = 0.075, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 92/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 223 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 282 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 283 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 340 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ + SA G + W + D Sbjct: 341 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSADGRKVRGRRYPWGVIEVDNEEHCD 400 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + ++ + ++ + ++ + Sbjct: 401 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 460 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + + + RQ + EK+ +E Sbjct: 461 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEEELFARHREMKEQLDRQRQELEEKKARLE 520 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 521 SGRPLEDKIKRKGFSLR 537 >gi|302509026|ref|XP_003016473.1| Similar to sporulation-specific protein of the yeast CDC3/10/11/12 [Arthroderma benhamiae CBS 112371] gi|291180043|gb|EFE35828.1| hypothetical protein ARB_04762 [Arthroderma benhamiae CBS 112371] Length = 543 Score = 43.6 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 92/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 229 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 288 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 289 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 346 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ + SA G + W + D Sbjct: 347 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSADGRKVRGRRYPWGVIEVDNEEHCD 406 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + ++ + ++ + ++ + Sbjct: 407 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 466 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + + + RQ + EK+ +E Sbjct: 467 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEEELFARHREMKEQLDRQRQELEEKKARLE 526 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 527 SGRPLEDKIKRKGFSLR 543 >gi|195154531|ref|XP_002018175.1| GL16908 [Drosophila persimilis] gi|194113971|gb|EDW36014.1| GL16908 [Drosophila persimilis] Length = 1476 Score = 43.6 bits (101), Expect = 0.076, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 55/140 (39%), Gaps = 1/140 (0%) Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + N ++ L+ + L L + + + + R + ++S+ + +N Sbjct: 970 QRVKTNLERDLAEQQQHLLELRERQREHEQQVKDQSERCTELEASHLESESQLQATIQNL 1029 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + ++ + EQ +++ ++ + + ++A L + LH L ++ Sbjct: 1030 RQQIDAFRLTEQGIQEKMQATNVAQASQMATLEARWSAANADVERLHEANDALQLAMDQ- 1088 Query: 431 LSHKIKSCHTSVSITTRILQ 450 S +++ +++ R L+ Sbjct: 1089 QSQRLEELQETLAQKDRQLE 1108 >gi|121711515|ref|XP_001273373.1| septin AspB [Aspergillus clavatus NRRL 1] gi|119401524|gb|EAW11947.1| septin AspB [Aspergillus clavatus NRRL 1] Length = 525 Score = 43.6 bits (101), Expect = 0.086, Method: Composition-based stats. Identities = 30/275 (10%), Positives = 82/275 (29%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N + PTG ++ + + R +V + PV + D E Sbjct: 253 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFK 312 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET- 251 Q + I R E+ N E++ A+ ++ + +A G + Sbjct: 313 Q--RILADIQHHSIKIFEGPRYELDDEETIAENQEIMSKVPFAVVGANTEVATADGRKVR 370 Query: 252 ----DWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 W + D + ++ E + + ++ + Sbjct: 371 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNTLYEDYRSEKLTQMGVAQDP 430 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 431 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 490 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 491 DQLERQRQELEEKKSRLESGRPIEEKGKRKGFSLR 525 >gi|330913891|ref|XP_003296411.1| hypothetical protein PTT_06507 [Pyrenophora teres f. teres 0-1] gi|311331443|gb|EFQ95491.1| hypothetical protein PTT_06507 [Pyrenophora teres f. teres 0-1] Length = 1520 Score = 43.6 bits (101), Expect = 0.087, Method: Composition-based stats. Identities = 19/167 (11%), Positives = 58/167 (34%), Gaps = 6/167 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 P + + + ++ + + Q + + +D + + Sbjct: 439 PPPQAEPLRQYEQHRQYMEEPQQYMEEPRYYPEEPQQYMDEPRQYVEPPQQYMDEPRQYV 498 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL--RYIFL 393 E + + ++ +++ + ++++ R+ + + +QHIEQ + R Sbjct: 499 EPP-QQYMEEPRQYVEPPRQQVE--SPLQHVEQPRRSVEQMRQHIEQPRQHVQPLRQHVE 555 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 ++++I L E + ++ L + RIE L + + Sbjct: 556 PQQQRIEPLRQYTEPPRQQVEPLRQQPEPRRQRIEP-LRQQSEPQRQ 601 Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 52/180 (28%), Gaps = 17/180 (9%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE----ARLNNIIIRLIKYKINTLNSLL 311 D + P P A + + + + + Sbjct: 429 MDMSRQPVEPPPPQAEPLRQYEQHRQYMEEPQQYMEEPRYYPEEPQQYMDEPRQYVEPPQ 488 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEI------IIFRKYRHFNHIINRIKSDFLIHN 365 + + Q + + ++ + +E + + + R + I+ + Sbjct: 489 QYMDEPRQYVEPPQQYMEEPRQYVEPPRQQVESPLQHVEQPRRSVEQMRQHIEQ--PRQH 546 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q RQH+ +QQ IE + R ++++ L E + RI L + Sbjct: 547 VQPLRQHVEPQQQRIEPL-----RQYTEPPRQQVEPLRQQPEPRRQRIEPLRQQSEPQRQ 601 >gi|114603379|ref|XP_001152944.1| PREDICTED: serine/threonine kinase 10 [Pan troglodytes] Length = 937 Score = 43.6 bits (101), Expect = 0.090, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 683 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 740 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 741 ELLRKHEKEREQMQRYNQRMTEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 800 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 801 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 860 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 861 VEHETQKLKALD 872 >gi|73670910|ref|YP_306925.1| hypothetical protein Mbar_A3472 [Methanosarcina barkeri str. Fusaro] gi|72398072|gb|AAZ72345.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 710 Score = 43.6 bits (101), Expect = 0.093, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 63/176 (35%), Gaps = 14/176 (7%) Query: 19 ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78 E+ +K + + + GE+ + +SG F++ D + ++ + Sbjct: 203 EIDSSMKGKL------LRIEGEVIQVKQ--TSGPTIFTISDEGGFVPCAAFESAGKRSYP 254 Query: 79 LPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHK 138 + G+ + G++T + QI + S+ G ++ R +++++E Sbjct: 255 HIDVGMIVSITGEVTL--RDDQIQIEVMSMKLLT-GEKEAVVKGRVERVIDEKASPADIP 311 Query: 139 NPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194 + + + V ++I + I P+ ++ G I AI Sbjct: 312 FLVQSEI--MEKLKPRMLHVAKEIKKAILHSTPI-ILRHHADADGITSAIAIERAI 364 >gi|145537942|ref|XP_001454682.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124422448|emb|CAK87285.1| unnamed protein product [Paramecium tetraurelia] Length = 538 Score = 43.2 bits (100), Expect = 0.099, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 58/166 (34%), Gaps = 5/166 (3%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + L+ S LE ++ S ++ L + + R +RL + Sbjct: 350 DDLRRSRERLEQLEQERKNNEQLEELRKSRSRIEELQKQRRRIEDLRTSQERLDALKRNR 409 Query: 339 LEIIIFRKYRHFNHI---INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 E + R N + R++ + ++ ++ + E +Q E++ + + +++ Sbjct: 410 DEQELRRSQERLNDLKKSRERLEQIEALRQSREQQRALDELRQSRERLDQLRVSQNRIDQ 469 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 E Q + I Y K + R+E L +++ Sbjct: 470 LENERKALQRSRQIEREIEYERQRSKDRLERLE--LEAQLERQRER 513 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 47/148 (31%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ L S + L R +RL + E + R + Sbjct: 284 QKSRERLEDLRRSRERLDDLRRSRERLNQLEELQRSRQRIEQLEDLKKSRERQAQIDELR 343 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ + ++ +EQ+ ++ LE+ K ++ + RI L T ++L Sbjct: 344 RSRERLDDLRRSRERLEQLEQERKNNEQLEELRKSRSRIEELQKQRRRIEDLRTSQERLD 403 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSF 452 +++ ++ + + Sbjct: 404 ALKRNRDEQELRRSQERLNDLKKSRERL 431 >gi|260788742|ref|XP_002589408.1| hypothetical protein BRAFLDRAFT_77852 [Branchiostoma floridae] gi|229274585|gb|EEN45419.1| hypothetical protein BRAFLDRAFT_77852 [Branchiostoma floridae] Length = 1219 Score = 43.2 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 46/153 (30%), Gaps = 12/153 (7%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + +L + L L + +L + + + Sbjct: 109 QMVQNLTRELQEQQIRLLTRLQEQKTSQQGQIGSLSDQLSEERVRSAELKQNF-----TR 163 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI---K 421 +Q+ + + Q++ Q +++ + + + L + L + K Sbjct: 164 KLQEQETRLQTQVQNLAQELQEQETRLQTQVQNLTQELQEQNTSFWTQTVSLSNQLLEEK 223 Query: 422 KLITRIEFILSHKIKSC----HTSVSITTRILQ 450 + R+E L+ K++ + T+ LQ Sbjct: 224 GMSVRLEQNLTRKLEEQETRIRARLQNLTQELQ 256 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 11/110 (10%), Positives = 38/110 (34%), Gaps = 5/110 (4%) Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 R + + + + + + +++ Q+V+ R + ++ + L Sbjct: 72 TTRLKNQVERLSSLVDTLLP--RLDSLSAELSKEKVKSAQMVQNLTRELQEQQIRLLTRL 129 Query: 403 HMLREQTKNRIFYLHTHIKKLITR---IEFILSHKIKSCHTSVSITTRIL 449 + + +I L + + R ++ + K++ T + + L Sbjct: 130 QEQKTSQQGQIGSLSDQLSEERVRSAELKQNFTRKLQEQETRLQTQVQNL 179 >gi|47125294|gb|AAH70077.1| Serine/threonine kinase 10 [Homo sapiens] Length = 968 Score = 43.2 bits (100), Expect = 0.100, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 892 VEHETQKLKALD 903 >gi|126362971|ref|NP_005981.3| serine/threonine-protein kinase 10 [Homo sapiens] gi|12643358|sp|O94804|STK10_HUMAN RecName: Full=Serine/threonine-protein kinase 10; AltName: Full=Lymphocyte-oriented kinase gi|4001688|dbj|BAA35073.1| protein kinase [Homo sapiens] gi|119581843|gb|EAW61439.1| serine/threonine kinase 10 [Homo sapiens] gi|189053883|dbj|BAG36152.1| unnamed protein product [Homo sapiens] Length = 968 Score = 43.2 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 892 VEHETQKLKALD 903 >gi|332225345|ref|XP_003261841.1| PREDICTED: pleckstrin homology-like domain family B member 2 isoform 1 [Nomascus leucogenys] gi|332225347|ref|XP_003261842.1| PREDICTED: pleckstrin homology-like domain family B member 2 isoform 2 [Nomascus leucogenys] Length = 1253 Score = 43.2 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVATEPATAVLVSQPQS 875 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 876 KEHFRSLEERKKQ 888 >gi|33304017|gb|AAQ02516.1| serine/threonine kinase 10 [synthetic construct] Length = 969 Score = 43.2 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 892 VEHETQKLKALD 903 >gi|148678542|gb|EDL10489.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_c [Mus musculus] Length = 876 Score = 43.2 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A+ + + + +E + + S + L L R + Sbjct: 292 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 351 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 +L+ L+ + + + + + +L+ + + +R Sbjct: 352 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 411 Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + +++++ E + ++ +++ R+ + ++ + + LQ Sbjct: 412 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 471 Query: 452 FA 453 + Sbjct: 472 LS 473 >gi|332248198|ref|XP_003273249.1| PREDICTED: serine/threonine-protein kinase 10 [Nomascus leucogenys] Length = 961 Score = 43.2 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 707 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 764 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 765 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 824 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 825 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 884 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 885 VEHETQKLKALD 896 >gi|145348896|ref|XP_001418879.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579109|gb|ABO97172.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 644 Score = 43.2 bits (100), Expect = 0.10, Method: Composition-based stats. Identities = 22/193 (11%), Positives = 58/193 (30%), Gaps = 7/193 (3%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 A PT A A P +LE + + + + + +K L + + Sbjct: 249 RHAAPPTNAP--ADPRAGAEYKVAYDLEVWKQHQMTKFYEDLRMKESVRMKILEDEWRRH 306 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI-----KSDFLIHNIQKNRQHILEK 376 R R +E + ++ D H +++ E+ Sbjct: 307 ETQRAREAEEGANRLRIMEKKLQEAAVALESRERKLVELEENFDHRKHKLERETSRAREE 366 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 + + ++ + +K+K R+ R+ + + +L + +++ Sbjct: 367 AKDSIRRNQETSEHRVEMEKQKAREAIRERDSLHRRLEHADAQLIELESSFAAHKKAQLE 426 Query: 437 SCHTSVSITTRIL 449 + ++ L Sbjct: 427 TNEAALQAEISRL 439 >gi|145976948|ref|NP_766148.2| centrobin [Mus musculus] gi|85540706|sp|Q8CB62|CNTRB_MOUSE RecName: Full=Centrobin; AltName: Full=Centrosomal BRCA2-interacting protein; AltName: Full=LYST-interacting protein 8 gi|168984396|emb|CAQ13013.1| centrobin, centrosomal BRCA2 interacting protein [Mus musculus] Length = 887 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A+ + + + +E + + S + L L R + Sbjct: 303 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 362 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 +L+ L+ + + + + + +L+ + + +R Sbjct: 363 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 422 Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + +++++ E + ++ +++ R+ + ++ + + LQ Sbjct: 423 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 482 Query: 452 FA 453 + Sbjct: 483 LS 484 >gi|194860747|ref|XP_001969648.1| GG23835 [Drosophila erecta] gi|190661515|gb|EDV58707.1| GG23835 [Drosophila erecta] Length = 692 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 62/193 (32%), Gaps = 8/193 (4%) Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 + + PV L+ + I K+ TL L + + ++ Sbjct: 213 NSPAVSRSSSPVLRMSTMRYAQLKCQRQEIRRSNNLEKLLTLQRLQRLHQQKRRQMAEVC 272 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 + RL E+ + + + S H++ + +L +QQ I + Sbjct: 273 REIARLSVHCVTRNELRLKPRTTSL----SGDHSAHQYHSMGRALSVLLAEQQQIAPLTL 328 Query: 386 QHLRYIFLE---KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + + + + +L RE + R ++++ + L ++ S + Sbjct: 329 YNAQQLTRRIEALSSQQRLLKAERETFRQRNERARQRLEEMREQ-REALQKQLHSQRHRL 387 Query: 443 SITTRILQSFAYK 455 L++ A + Sbjct: 388 EKERLELRTLAPQ 400 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 53/182 (29%), Gaps = 6/182 (3%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 +H ++ L+ ++ + TL + + + S R + Sbjct: 298 SGDHSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395 N + + + H ++K R + QH+EQ + R+I + Sbjct: 358 RNERARQRLEEMREQREALQKQLHSQRHRLEKERLELRTLAPQHLEQ--RDQRRHIERQV 415 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + +++ L + ++ N + + ++L + + Sbjct: 416 ERRMSTLVLELQEIYNIQNVGSRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472 Query: 456 NT 457 Sbjct: 473 AV 474 >gi|24641628|ref|NP_727647.1| CG32650 [Drosophila melanogaster] gi|22832167|gb|AAF48208.2| CG32650 [Drosophila melanogaster] Length = 346 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 18/206 (8%), Positives = 61/206 (29%), Gaps = 2/206 (0%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D +++D + +L +P E+A P + ++ + + + + Sbjct: 24 DIDGSVSDGSEELEEQSPEQIEEIAWPQMKREIGAMNRTLDEIQAQLAIDFHERDGGRSC 83 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + + L R + E L + + R + + ++ L Sbjct: 84 WEEEQEALAKGLEPEDSRWMIMHGSREAALRELQWNNLRIRRQLADLVRCSELGRARISA 143 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK--NRIFYLHTHIKKLITRI 427 + ++Q +Q + K ++ + ++ + K+ + Sbjct: 144 LDRLFQRQTKELVGCRQDHERVLSFHLTKQLEAGKCLQRYRYARDLYASWRELFKMGRHL 203 Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453 + ++ + + Q+ Sbjct: 204 KEAYKKILERTQSRLEYAEIKRQALD 229 >gi|307307025|ref|ZP_07586764.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti BL225C] gi|306901965|gb|EFN32564.1| Peptidoglycan-binding domain 1 protein [Sinorhizobium meliloti BL225C] Length = 1220 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 7/240 (2%) Query: 216 RGGGSIEDLWHFN----DEMIVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGA 270 R G + L F+ DE++ A I I+++ + + A Sbjct: 221 RWTGVEDRLNAFDQNRDDELVALAYRLDEIKAQINSLDRGAGVEVLESKLVAVAQAIEML 280 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 P + L +L+ RL+ I + N + + + L ++D Sbjct: 281 GRQIQPDERRLAPQFADLDKRLDEISRAIAAGSRNVAGTDGSFVDRLENRLGDLSRQIDT 340 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 L ++ L I + + L + + + R Sbjct: 341 LSNPVDSGLGARIEALAARVEDLAGEKAAARLEERLDQLSAVLE--HNRPGAEPDLTDRL 398 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + +K + + + R+ L I L +E + ++ + L+ Sbjct: 399 ADISRKIEALSGDSITDALAERLDDLARRIDGLAGNVEPSADTRFDRLEDRLAGIAQRLE 458 >gi|297676652|ref|XP_002816236.1| PREDICTED: serine/threonine-protein kinase 10-like isoform 1 [Pongo abelii] gi|297676654|ref|XP_002816237.1| PREDICTED: serine/threonine-protein kinase 10-like isoform 2 [Pongo abelii] Length = 968 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 714 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 771 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 891 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 892 VEHETQKLKALD 903 >gi|289548463|ref|YP_003473451.1| chromosome segregation protein SMC [Thermocrinis albus DSM 14484] gi|289182080|gb|ADC89324.1| chromosome segregation protein SMC [Thermocrinis albus DSM 14484] Length = 1165 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 75/207 (36%), Gaps = 18/207 (8%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 + E + + + N++ +K L + + Q L Sbjct: 246 TIESKEKVLREELASLRQQEEEKQGELNLLEEKLKELREKLLPHREMVGRLSQKLESISN 305 Query: 327 RLDRLPRELEHNLEII--IFRKYRHFNHIINRIKSD--FLIHNIQKNRQHILEKQQHIEQ 382 RL ++ R E L+ + R+ H H +R++ + L H + + + + E + +E+ Sbjct: 306 RLQQIARTKEELLDQRTTLERQLEHLKHDADRLRIEKEDLAHQLIQREEELTEDEVMLEE 365 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI------LSHKIK 436 + K EK+ + E + RI L ++ ++ + + +I+ Sbjct: 366 LQK-----TLQEKESFLKASFGELESVEERIKKLEGTLRHKKDQLSQLEIKIKDIQLRIE 420 Query: 437 SCHTSVSITTRILQSF---AYKNTLKR 460 + T R L+S + + L++ Sbjct: 421 RLEEELQNTERELESLKEGSKDSVLQK 447 >gi|321478076|gb|EFX89034.1| hypothetical protein DAPPUDRAFT_310878 [Daphnia pulex] Length = 811 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 75/259 (28%), Gaps = 20/259 (7%) Query: 220 SIEDLWHFNDEMIVRAIANSSI----PIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275 S + D + R + + ++S HE + A+ R T + Sbjct: 265 SRTGVCIGCDAGMCRTFFHVTCAQRDGLLSETFHEETVQADPFYANCRLHTEKSTIKRRK 324 Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 Q L+ + N L + ++ Q + R Sbjct: 325 QNYLSHQRHLVWWTNKRNTGRDLLTSGQSEDVSLRRILRKLGRQRVKFQTKHWPRASWVP 384 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI------LEKQQHIEQIVKQHLR 389 + ++ + + + ++ R+ L K+ HI Sbjct: 385 TQKMPRLLTTCASAVRRLRAKAVLMAVDVEAEEVREAQVSALSDLPKKWHIPPAFSVEFI 444 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL--SHKIKSC----HTSVS 443 ++++ +IA L K L K+ R + ++ + +K+ ++ Sbjct: 445 AYVIDRERRIAQLREQTTSMKEESRELDDSEKQWRLRYDCLIEEQNLLKNRETAYRNQLN 504 Query: 444 ITTRILQSFAYKNTLKRGY 462 IL + + KRG+ Sbjct: 505 TLHHILSAVSP----KRGF 519 >gi|307544966|ref|YP_003897445.1| hypothetical protein HELO_2376 [Halomonas elongata DSM 2581] gi|307216990|emb|CBV42260.1| hypothetical protein HELO_2376 [Halomonas elongata DSM 2581] Length = 1226 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 23/212 (10%), Positives = 59/212 (27%), Gaps = 14/212 (6%) Query: 250 ETDWTLADYAADLRAPTPT-----GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 E D +AD + L P AE + E + + Sbjct: 256 EVDRDIADLESTLWQLGPQLDADRHRAERVLADTEAELNVQQEAFQARERDYEQARDTLN 315 Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDF 361 + ++ L L + ++L+ + + ++ LE + + + + Sbjct: 316 DRISELASELDRTQRSLNDLQQQYEQYAEADMPALERDLAELPQWRGQVQELQQHLALMQ 375 Query: 362 LIHNIQKNRQ--HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++R + E ++ + + I EK A ++ H Sbjct: 376 DAAQENQSRLDGRLRELADNLSRRSDEIQALIDELGDEKAACQERQWAAERDLEAQYHAR 435 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 ++ +++ ++ L S Sbjct: 436 ----RAELDASYQQRLEQGIERLADLKAQLDS 463 >gi|208434884|ref|YP_002266550.1| exonuclease VII, large subunit [Helicobacter pylori G27] gi|208432813|gb|ACI27684.1| exonuclease VII, large subunit [Helicobacter pylori G27] Length = 90 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 28/89 (31%), Positives = 40/89 (44%) Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +SAIGHE D+ L+D ADLRA TP+ A E+ +P + L +L L+ K Sbjct: 1 MSAIGHENDFLLSDLVADLRASTPSNAMEILLPNSDEWLQRLDGFNVKLRRSFKILLHQK 60 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLP 332 L L L + ++ S L Sbjct: 61 KAHLEHLADFLEKRNYPVNHSEPGSQALH 89 >gi|123443387|ref|YP_001007361.1| exonuclease [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090348|emb|CAL13216.1| exonuclease [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 1229 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 20/194 (10%), Positives = 61/194 (31%), Gaps = 8/194 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 A +A Q L + + LI + ++L L L S+ +L+ Sbjct: 336 ANLARQQHATNQHEQETLIEQKVVPLDNLIAQQQHSLMLLGTQLEQLRTKKQQSKQQLEL 395 Query: 331 LPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 ++ + + + + + + + Q + H+ ++Q + Q Sbjct: 396 NEQQFKLAYQRLQQLTEYTQQYAHHQHWAKNLPLWREQFRQLHMQQQQSVESEQQLQQQA 455 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI 448 + +++I L+ +Q + + H+ + ++ + + + + Sbjct: 456 RLLATLQQQIDTLNEQDKQQQAALVQAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQ 515 Query: 449 ------LQSFAYKN 456 L + + Sbjct: 516 RPVRQQLAALSPLA 529 >gi|45825121|gb|AAS77468.1| AT08472p [Drosophila melanogaster] Length = 346 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 17/206 (8%), Positives = 61/206 (29%), Gaps = 2/206 (0%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 + D +++D + ++ +P E+A P + ++ + + + + Sbjct: 24 DIDGSVSDGSEEVEEQSPEQIEEIAWPQMKREIGAMNRTLDEIQAQLAIDFHERDGGRSC 83 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + + L R + E L + + R + + ++ L Sbjct: 84 WEEEQEALAKGLEPEDSRWMIMHGSREAALRELQWNNLRIRRQLADLVRCSELGRARISA 143 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK--NRIFYLHTHIKKLITRI 427 + ++Q +Q + K ++ + ++ + K+ + Sbjct: 144 LDRLFQRQTKELVGCRQDHERVLSFHLTKQLEAGKCLQRYRYARDLYASWRELFKMGRHL 203 Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453 + ++ + + Q+ Sbjct: 204 KEAYKKILERTQSRLEYAEIKRQALD 229 >gi|259648496|dbj|BAI40658.1| antimicrobial peptide ABC transporter permease component [Lactobacillus rhamnosus GG] Length = 1097 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 13/198 (6%), Positives = 52/198 (26%), Gaps = 12/198 (6%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 + +G+ ++ + + K + + + Sbjct: 179 DSTSGSGDLKGYGVVTANNFDSDFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNQRL 238 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS-----DFLIHNIQKNRQHILEKQQH 379 + ++ + I + + ++ S + +Q I KQQ Sbjct: 239 KDAPADRLAAIKKQYQKKIDAGQKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQE 298 Query: 380 IEQIVKQHLRY------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ VK + +++ + K ++ + + Sbjct: 299 LDTAVKNGQAQIASGEAQLQQAATQLSQSELQLASAKQQLEASQQQLDAKHQDLASA-KQ 357 Query: 434 KIKSCHTSVSITTRILQS 451 ++ + + ++ + L + Sbjct: 358 QLDTANQQLANSQAQLAA 375 >gi|199599007|ref|ZP_03212415.1| ABC transporter [Lactobacillus rhamnosus HN001] gi|199590115|gb|EDY98213.1| ABC transporter [Lactobacillus rhamnosus HN001] Length = 1101 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 13/198 (6%), Positives = 52/198 (26%), Gaps = 12/198 (6%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 + +G+ ++ + + K + + + Sbjct: 183 DSTSGSGDLKGYGVVTANNFDSDFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNQRL 242 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS-----DFLIHNIQKNRQHILEKQQH 379 + ++ + I + + ++ S + +Q I KQQ Sbjct: 243 KDAPADRLAAIKKQYQKKIDAGQKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQE 302 Query: 380 IEQIVKQHLRY------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ VK + +++ + K ++ + + Sbjct: 303 LDTAVKNGQAQIASGEAQLQQAATQLSQSELQLASAKQQLEASQQQLDAKHQDLASA-KQ 361 Query: 434 KIKSCHTSVSITTRILQS 451 ++ + + ++ + L + Sbjct: 362 QLDTANQQLANSQAQLAA 379 >gi|91773749|ref|YP_566441.1| phosphoesterase, RecJ-like protein [Methanococcoides burtonii DSM 6242] gi|91712764|gb|ABE52691.1| Nucleic acid binding protein [Methanococcoides burtonii DSM 6242] Length = 707 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 6/75 (8%) Query: 35 VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 V + GE+ + G F++ D I ++ + + + G++T Sbjct: 211 VKIEGEVIQVKQTA--GPTIFTISDEDGLISCAAFESAGTRAFPEIDADMIITATGEVT- 267 Query: 95 FPGSS-KYQIIIESL 108 + Q+ + S+ Sbjct: 268 --SRGDRLQLEVRSM 280 >gi|17375431|sp|P74750|DPO3A_SYNY3 RecName: Full=DNA polymerase III subunit alpha; Contains: RecName: Full=Ssp dnaE intein Length = 1355 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 + +L+D + +A+++ +++ + EG + ++ GK+ +YQ+I+E L P Sbjct: 1207 FLTLEDMSGQSEAVVFPSNYERLQDVLIEGSQQMIWGKVD--RRDDQYQLIVEDLEPV 1262 >gi|258507126|ref|YP_003169877.1| ABC transporter permease [Lactobacillus rhamnosus GG] gi|257147053|emb|CAR86026.1| ABC transporter permease protein [Lactobacillus rhamnosus GG] Length = 1101 Score = 43.2 bits (100), Expect = 0.11, Method: Composition-based stats. Identities = 13/198 (6%), Positives = 52/198 (26%), Gaps = 12/198 (6%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 + +G+ ++ + + K + + + Sbjct: 183 DSTSGSGDLKGYGVVTANNFDSDFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNQRL 242 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS-----DFLIHNIQKNRQHILEKQQH 379 + ++ + I + + ++ S + +Q I KQQ Sbjct: 243 KDAPADRLAAIKKQYQKKIDAGQKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQE 302 Query: 380 IEQIVKQHLRY------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ VK + +++ + K ++ + + Sbjct: 303 LDTAVKNGQAQIASGEAQLQQAATQLSQSELQLASAKQQLEASQQQLDAKHQDLASA-KQ 361 Query: 434 KIKSCHTSVSITTRILQS 451 ++ + + ++ + L + Sbjct: 362 QLDTANQQLANSQAQLAA 379 >gi|307297642|ref|ZP_07577448.1| metal dependent phosphohydrolase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916902|gb|EFN47284.1| metal dependent phosphohydrolase [Thermotogales bacterium mesG1.Ag.4.2] Length = 353 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 +L D I AI W + + E+G+ + G++ + + + E + G Sbjct: 62 LTLSDKTGAIRAIDW-FNAERNDSTLEQGMVVRISGRVAVYEDRIQLNLDSEGIQILQVG 120 >gi|47218622|emb|CAG04951.1| unnamed protein product [Tetraodon nigroviridis] Length = 553 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 14/189 (7%), Positives = 51/189 (26%), Gaps = 13/189 (6%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 TP+ +P + + ++ I ++ + + Sbjct: 1 MTPSSGISAGLPFRFRPRREKVDWRRIHAVDIDHVVSQLDVDVLQEHINTVTFCSLDAEQ 60 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R L + + NH K + Q E+ + Sbjct: 61 CQRCQSPMDLTLMKLFRLAQLSEANLNHSAKNEKPASPV-------------QSQAERDL 107 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 + ++ + + +R+ + ++ R++ ++ +++ ++ Sbjct: 108 DNYKELQLQAIQKLEQQMKKQLLKEMSRMQSSVSDHQEQSQRLQQEMTKRLQEKEQTIKA 167 Query: 445 TTRILQSFA 453 L++ + Sbjct: 168 QREQLKTLS 176 >gi|315050912|ref|XP_003174830.1| cell division control protein 3 [Arthroderma gypseum CBS 118893] gi|311340145|gb|EFQ99347.1| cell division control protein 3 [Arthroderma gypseum CBS 118893] Length = 538 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 92/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 224 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 283 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 284 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 341 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ + S G + W + D Sbjct: 342 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSTDGRKVRGRRYPWGVIEVDNEEHCD 401 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + ++ + ++ + ++ + Sbjct: 402 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 461 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + + + + RQ + EK+ +E Sbjct: 462 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 521 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 522 SGRPLEDKIKRKGFSLR 538 >gi|291387818|ref|XP_002710248.1| PREDICTED: serine/threonine kinase 10 [Oryctolagus cuniculus] Length = 968 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 15/192 (7%), Positives = 54/192 (28%), Gaps = 5/192 (2%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 + + L + + ++++ + L K L Sbjct: 712 TSDNRREICDKERECLGRKQELLREREAALWEMEEHQLQERHQLAKQQLKDQYFLQRFSP 771 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 + L + ++ R + K+ + + + ++ + Sbjct: 772 SMPSLGKLEREQMQRYNQRMVEQLKLRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 832 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMMAQCESNMSELQQLQNEKCHLL 891 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 892 VEHETQKLKALD 903 >gi|261418242|ref|YP_003251924.1| DNA polymerase III subunit alpha [Geobacillus sp. Y412MC61] gi|319767798|ref|YP_004133299.1| DNA polymerase III subunit alpha [Geobacillus sp. Y412MC52] gi|261374699|gb|ACX77442.1| DNA polymerase III, alpha subunit [Geobacillus sp. Y412MC61] gi|317112664|gb|ADU95156.1| DNA polymerase III, alpha subunit [Geobacillus sp. Y412MC52] Length = 1092 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 +F++ D ++A+ + + + +EG L+ G I + Q+II Sbjct: 961 FFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEV--RGGRRQLIIRRAERLLV 1018 Query: 114 GTLL 117 L Sbjct: 1019 SALY 1022 >gi|160333855|ref|NP_001103956.1| filamin A-interacting protein 1-like [Danio rerio] gi|160385738|sp|A3KNA5|FIL1L_DANRE RecName: Full=Filamin A-interacting protein 1-like gi|126631251|gb|AAI33735.1| Zgc:158292 protein [Danio rerio] Length = 1129 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 76/220 (34%), Gaps = 7/220 (3%) Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL---EARLNNII 296 ++ ++ + + + D+ + +E + L L E + + Sbjct: 105 PTAVLKSLQRDGLQQSSGWQEDIYEKPIAELDRLVEKQRETHRRMLEQLLLVERAHKHTL 164 Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 RL K N + + K+ + L R RL +L + + E + ++ + Sbjct: 165 HRLEDEKKNHRDFMKKS-DDFTSLLEHDRERLKQLIDQEKTYQERKEEESNKQVTNLKDE 223 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + + + Q L +Q + Q L+ + +E++ + +N++ L Sbjct: 224 LTKLKSFALLVVDEQQRLTEQLSQQITKVQELQNSAGQAQEELNSAQTRLQDEENKVLRL 283 Query: 417 HTHIKKLI---TRIEFILSHKIKSCHTSVSITTRILQSFA 453 ++K + + ++ K+ + + L S + Sbjct: 284 EEELRKQTCHFHQEQDAMTAKLTNEDAQNRQLRQKLSSLS 323 >gi|297529096|ref|YP_003670371.1| DNA polymerase III subunit alpha [Geobacillus sp. C56-T3] gi|297252348|gb|ADI25794.1| DNA polymerase III, alpha subunit [Geobacillus sp. C56-T3] Length = 1092 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 2/64 (3%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 +F++ D ++A+ + + + +EG L+ G I + Q+II Sbjct: 961 FFTVGDESGELEAVAFPNVYRRAADILKEGQFVLLAGTIEV--RGGRRQLIIRRAERLLV 1018 Query: 114 GTLL 117 L Sbjct: 1019 SALY 1022 >gi|329665086|ref|NP_001193237.1| pleckstrin homology-like domain family B member 2 [Bos taurus] gi|297470848|ref|XP_002684815.1| PREDICTED: hypothetical protein [Bos taurus] gi|296491493|gb|DAA33546.1| hypothetical protein BOS_811 [Bos taurus] Length = 1254 Score = 43.2 bits (100), Expect = 0.12, Method: Composition-based stats. Identities = 23/192 (11%), Positives = 62/192 (32%), Gaps = 12/192 (6%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKITELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L + + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLERESRLDEEKENLTQQLLREVAEYQRNIVTRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVT 823 Query: 454 YKNTLKRGYTSI 465 NTLK GY + Sbjct: 824 P-NTLKEGYIIV 834 >gi|148678541|gb|EDL10488.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_b [Mus musculus] Length = 796 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A+ + + + +E + + S + L L R + Sbjct: 212 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 271 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 +L+ L+ + + + + + +L+ + + +R Sbjct: 272 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 331 Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + +++++ E + ++ +++ R+ + ++ + + LQ Sbjct: 332 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 391 Query: 452 FA 453 + Sbjct: 392 LS 393 >gi|88810626|ref|ZP_01125883.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231] gi|88792256|gb|EAR23366.1| hypothetical protein NB231_16138 [Nitrococcus mobilis Nb-231] Length = 1170 Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 13/171 (7%), Positives = 50/171 (29%), Gaps = 16/171 (9%) Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR-HFNHIINRIKSD 360 ++ + + + ++ +R + R + L+ + R ++ + Sbjct: 725 HRRDQIRQRRSVIAQEQTEIAATRQDTVEVIRTAQARLQEALERGETLERERALHNEEQQ 784 Query: 361 FLIHNIQKNRQHILEKQQHIE------------QIVKQHLRYIFLEKKEKIAILHMLREQ 408 L + + E Q + Q + ++E++ E Sbjct: 785 RLQAQLATAQNRCNELQARLHELTLQEQSVATAQAALEESFTRLQTRRERLLTRDAELEA 844 Query: 409 TKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRILQSFAYKN 456 ++ ++ R+ + + +++ + + R L+ + Sbjct: 845 VLAQLDAPEAELESERERLLARQRTVEEELRQARRELDESGRRLRELEPQR 895 >gi|238795235|ref|ZP_04638819.1| Exonuclease SbcC [Yersinia intermedia ATCC 29909] gi|238725428|gb|EEQ16998.1| Exonuclease SbcC [Yersinia intermedia ATCC 29909] Length = 1157 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 21/189 (11%), Positives = 53/189 (28%), Gaps = 8/189 (4%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + Q L + + LI + ++L L R +L+ ++L Sbjct: 271 QQQAARQHEQETLIEQKVVPLDNLIAQQQHSLAQFAAQLQQLRGKEQQGRQQLELNEQQL 330 Query: 336 EHNLEIIIF-----RKYRHFNHIINRIKSDFLIHN---IQKNRQHILEKQQHIEQIVKQH 387 + + ++Y H H + IQ + E+Q + ++ Sbjct: 331 LKTHQRLQQLAEYAQQYPHHQHWEKCLPLWREQFRQLHIQHQQSVANEQQLQQQAVLLSS 390 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 L+ E+ ++ Q + + + L + + + Sbjct: 391 LQQQATTLNEQDKQQQVVLAQATLQAGSIQQQLTALEQQQPSTQLRQQLDELQQQRSARQ 450 Query: 448 ILQSFAYKN 456 L + + Sbjct: 451 QLATLSPLA 459 >gi|297295724|ref|XP_002804682.1| PREDICTED: serine/threonine-protein kinase 10-like [Macaca mulatta] Length = 923 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 669 TTDNRREICGKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 726 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 727 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 786 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 787 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 846 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 847 VEHETQKLKALD 858 >gi|194893896|ref|XP_001977962.1| GG17951 [Drosophila erecta] gi|190649611|gb|EDV46889.1| GG17951 [Drosophila erecta] Length = 388 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 7/143 (4%) Query: 314 LPNSDQTLSCSRYRLDRLPRELEHN--LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L D L L+RL LE L + + ++ R+ + + R Sbjct: 18 LERLDPLLERVVPLLERLDPLLERLDPLLERLDPLLERLDPLLERLDPLLERLDPLRERD 77 Query: 372 HILEKQQHIE----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + +E + L +E++ L R+ + R L + L R+ Sbjct: 78 RLDPLLDRLEPEPLRERLDPLLERLDPLRERLEPLRERRDPLRERADPLRERLDPLRERL 137 Query: 428 EFILSHKIKSCHTSVSITTRILQ 450 E L +++ + L Sbjct: 138 EP-LRERLEPLRERLEPLRERLD 159 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 36/188 (19%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII-FRKYRHFNHIINRIKSDFLI 363 L+ LL+ L + L RLD L L+ LE + R+ + +++R++ + L Sbjct: 33 ERLDPLLERLDPLLERLDPLLERLDPLLERLDPLLERLDPLRERDRLDPLLDRLEPEPLR 92 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHL--RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + + + ++ +E + ++ R +E++ L E + R+ L ++ Sbjct: 93 ERLDPLLERLDPLRERLEPLRERRDPLRERADPLRERLDPLRERLEPLRERLEPLRERLE 152 Query: 422 KLITRIE-----------------------------FILSHKIKSCHTSVSITTRIL--- 449 L R++ +L +++ L Sbjct: 153 PLRERLDPDPLRDLLDPEPLRERREPLRDLFERLEPDLLRDRLEPLRERCDPLRDRLDPL 212 Query: 450 -QSFAYKN 456 +S Sbjct: 213 RESLEPLR 220 >gi|332250912|ref|XP_003274593.1| PREDICTED: centrobin [Nomascus leucogenys] Length = 819 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 49/169 (28%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + + S + L L R + +L+ + + + Sbjct: 223 EAEQQRCCALQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 282 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 283 QAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 342 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 343 ESQRIQLESELAVQLEQQVTERLAQAQESSLRQAASLREHHRKQLQDLS 391 >gi|148678540|gb|EDL10487.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_a [Mus musculus] Length = 793 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A+ + + + +E + + S + L L R + Sbjct: 209 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 268 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 +L+ L+ + + + + + +L+ + + +R Sbjct: 269 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 328 Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + +++++ E + ++ +++ R+ + ++ + + LQ Sbjct: 329 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 388 Query: 452 FA 453 + Sbjct: 389 LS 390 >gi|281182792|ref|NP_062079.2| serine/threonine-protein kinase 10 [Rattus norvegicus] Length = 980 Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats. Identities = 15/207 (7%), Positives = 55/207 (26%), Gaps = 10/207 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + + ++ + Sbjct: 710 DFVAKQKEDLELAMKKLTAENRREICDKERDCLNKKQELLRDREAALWEMEEHQLQERHQ 769 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ + Sbjct: 770 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 829 Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ + +Q + ++E+ +Q + + + + + Sbjct: 830 RMAMYKKSLHINGAGSASEQREKVKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 889 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + CH V T+ L++ Sbjct: 890 MNELQQLQNEKCHLLVEHETQKLKALD 916 >gi|315925523|ref|ZP_07921733.1| CMP-binding-factor 1 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621064|gb|EFV01035.1| CMP-binding-factor 1 [Pseudoramibacter alactolyticus ATCC 23263] Length = 319 Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 23/106 (21%) Query: 19 ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYF--SLKDNHSR-IDAIIWKGTLNK 75 +L+ K ES L ++ ++ S ++G YF +L D+ ++A +W Sbjct: 5 QLNQVKKG--ESLLGYLFIK---SQTVKTSTNGSRYFNMTLTDSAFTGMNAKMW------ 53 Query: 76 IEFLP------EEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGT 115 + P EG V K+ + + QII+ + + G Sbjct: 54 -DVKPVDEEEFTEGQLVKVKAKVQEY--NGNLQIIVNRMRLTNEGD 96 >gi|220678338|emb|CAX14364.1| novel protein similar to vertebrate STE20-like kinase (yeast) (SLK) [Danio rerio] Length = 969 Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 54/181 (29%), Gaps = 3/181 (1%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 T + + V+ + +E RL K L T Sbjct: 627 FEHETTSKKRQYDTEVENMERQQKQTIERLEQEHTERLRDEAKRIKAEQDKELSKFQNTH 686 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + ++ + +L+ + + + + + D L H Q R + E Sbjct: 687 KNRKKEEQEFVQKQQQDLDSALKKIIQQHKLELATTERDCLNHKQQLLRAREAAMWELEE 746 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + +++ + L K++ M R Q R + + R+ + ++ T Sbjct: 747 RHLQEKHQ---LYKQQLKDQYFMQRHQLLKRHEKEMEQMHRYNQRLMEDMKNRQMQEKTR 803 Query: 442 V 442 + Sbjct: 804 L 804 >gi|15964288|ref|NP_384641.1| hypothetical protein SMc02230 [Sinorhizobium meliloti 1021] gi|15073465|emb|CAC45107.1| Hypothetical transmembrane protein [Sinorhizobium meliloti 1021] Length = 960 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 7/240 (2%) Query: 216 RGGGSIEDLWHFN----DEMIVRAIANSSI-PIISAIGHETDWTLADYAADLRAPTPTGA 270 R G + L F+ DE++ A I I+++ + + A Sbjct: 221 RWTGVEDRLNAFDQNRDDELVALAYRLDEIKAQINSLDRGAGVEVLESKLVAVAQAIEML 280 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 P + L +L+ RL+ I + N + + + L ++D Sbjct: 281 GRQIQPDERRLAPQFADLDKRLDEISRAIAAGSRNVAGTDGSFVDRLENRLGDLSRQIDT 340 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 L ++ L I + + L + + + R Sbjct: 341 LSNPVDSGLGARIEALAARVEDLAGEKAAARLEERLDQLSAVLEH--NRPGAEPDLTDRL 398 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + +K + + + R+ L I L +E + ++ + L+ Sbjct: 399 ADISRKIEALSGDSITDALAERLDDLARRIDGLAGNVEPSADTRFDRLEDRLAGIAQRLE 458 >gi|268316211|ref|YP_003289930.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252] gi|262333745|gb|ACY47542.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252] Length = 1185 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 17/163 (10%), Positives = 46/163 (28%), Gaps = 15/163 (9%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + N L +L D+ L +R +RL + + Sbjct: 287 QERLHALQNRLQALDSEGRLLDERLQAARSEQERL--------QREAKEAEHQEQRLRQA 338 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 +++ R E + ++ +++E++ L +Q + + Sbjct: 339 LEAAETAVREAMPRHEAAEAALRQALEARDAAQHALEQQRERVREARRLLQQAEQTLHEA 398 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 + + R ++ + + L + TL+ Sbjct: 399 RRQLDRQSNR-----RELLEQERERLDAEQKTLDAQ--LQTLE 434 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 63/206 (30%), Gaps = 30/206 (14%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + RL+ ++ S + L + RL + E Sbjct: 284 EAAQERLHALQNRLQALDSEGRLLDERLQAARSEQERLQREAKEAEHQEQRLRQALEAAE 343 Query: 337 HNLEIIIFRKYRHFNHIINRIK-SDFLIHNIQKNRQHILEKQQHIEQIVKQHL--RYIFL 393 + + R + ++ D H +++ R+ + E ++ ++Q + R Sbjct: 344 TAVREAMPRHEAAEAALRQALEARDAAQHALEQQRERVREARRLLQQAEQTLHEARRQLD 403 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLI-----------------TRIEF------- 429 + + +L RE+ L ++ L R+ Sbjct: 404 RQSNRRELLEQERERLDAEQKTLDAQLQTLETEQEETLRKRKTARQTCERLRKEIEALEA 463 Query: 430 ---ILSHKIKSCHTSVSITTRILQSF 452 L +I + + ++ R L++ Sbjct: 464 RRQALRQEIAARNEALHRRERRLEAV 489 >gi|301063318|ref|ZP_07203863.1| HDIG domain protein [delta proteobacterium NaphS2] gi|300442615|gb|EFK06835.1| HDIG domain protein [delta proteobacterium NaphS2] Length = 334 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 3/59 (5%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 +L D + A +W + L EG V G+ +T+ + Q+ I L PS Sbjct: 33 LTLADKTGDLPAKVW-DRAEALSPLFHEGEVVEVTGRSSTY--QGQLQLTISELRPSPE 88 >gi|297284953|ref|XP_001097875.2| PREDICTED: pleckstrin homology-like domain family B member 2-like [Macaca mulatta] Length = 1253 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 35/253 (13%), Positives = 82/253 (32%), Gaps = 20/253 (7%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-------- 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 823 Query: 454 YKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF-FDGQANAIVINKAPPKEQPTKKC 512 NTLK GY + N NL+ F D A+A+ A + Sbjct: 824 P-NTLKEGY-ISVNEINEPCGNSTNLSP----STQFPAD--ADAVAAEPATAVLASQPQS 875 Query: 513 QLHNNKREKQGTQ 525 + H E++ Q Sbjct: 876 KEHFRSLEERKKQ 888 >gi|119718880|ref|YP_925845.1| single-strand binding protein [Nocardioides sp. JS614] gi|119539541|gb|ABL84158.1| single-strand binding protein [Nocardioides sp. JS614] Length = 188 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109 KD + + +W+ + + G+ +V G++ T+ + ++I +E + Sbjct: 48 KDGDALFLSCSVWRQAAENVAESLQRGMRVVVQGRLKSRTYETREGEKRTVFEIEVEEVG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|312200637|ref|YP_004020698.1| single-strand binding protein [Frankia sp. EuI1c] gi|311231973|gb|ADP84828.1| single-strand binding protein [Frankia sp. EuI1c] Length = 141 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSS----KYQIIIESLIPS 111 + IW+ + +G+ +V G++ ++ +++ ++ + PS Sbjct: 55 LRCSIWRQPAEHVADSLAKGMRVIVTGRLRQRSYEKDGVKRTAFELDVDEIGPS 108 >gi|124806285|ref|XP_001350680.1| NIMA-related protein kinase, Pfnek-1 [Plasmodium falciparum 3D7] gi|23496806|gb|AAN36360.1| NIMA-related protein kinase, Pfnek-1 [Plasmodium falciparum 3D7] Length = 1057 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 27/280 (9%), Positives = 81/280 (28%), Gaps = 16/280 (5%) Query: 178 PVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIA 237 P+ + + + N + D++I R + + ++ AI+ Sbjct: 304 PILSKKEHGTELTNIDSCTSNMDNKHNYAHPNDVLINKRNNERERSSSCLSRQSVITAIS 363 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 ++ G + + A + + Sbjct: 364 KDNVKYHPPDGTNNSHLINN---GKYTNNSRVGGVHADGPTKMYHIETDRFNEKEKMKRE 420 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + +K L R + +R+ RE + +E I + + Sbjct: 421 IYERERSQRKAFEMKLLEKK----RLEREKKERVEREKKGKMERIERERMQRLERERLER 476 Query: 358 KSDFLIHNIQKNRQHILEKQQ-------HIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + ++K R LEK++ ++++ K L + ++ +++ + R + + Sbjct: 477 LEKERLDRLEKERLDRLEKERLDRLEKDRLDRLEKDRLDRLEKDRLDRLEKDRLDRLEKE 536 Query: 411 NRIFYLHTHIKKLIT-RIEFILSHKIKSC-HTSVSITTRI 448 + + R++ + ++ R+ Sbjct: 537 RLERLEKERLDRFEKERLDRLGKERLDRLGKERFERMDRL 576 >gi|222480812|ref|YP_002567049.1| phosphoesterase RecJ domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222453714|gb|ACM57979.1| phosphoesterase RecJ domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 648 Score = 42.8 bits (99), Expect = 0.15, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 4/88 (4%) Query: 35 VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 V V GE+ + G F++ D + ++ + E G V G + T Sbjct: 137 VTVEGEVVQ--AKQTGGPTIFAVADASGVVSCAAFEEAGVRAYPEVEVGDMVHVSGTVET 194 Query: 95 FPGSSKYQIIIESLIPSGSGTLLTALEK 122 Q+ ++SL G A E+ Sbjct: 195 REN--ALQLEVDSLKRLPEGRAAEARER 220 >gi|26331630|dbj|BAC29545.1| unnamed protein product [Mus musculus] gi|35193227|gb|AAH58512.1| Cntrob protein [Mus musculus] Length = 662 Score = 42.8 bits (99), Expect = 0.16, Method: Composition-based stats. Identities = 14/182 (7%), Positives = 55/182 (30%), Gaps = 2/182 (1%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A+ + + + +E + + S + L L R + Sbjct: 78 ALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEH 137 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 +L+ L+ + + + + + +L+ + + +R Sbjct: 138 QLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERD 197 Query: 394 EKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + +++++ E + ++ +++ R+ + ++ + + LQ Sbjct: 198 ALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQE 257 Query: 452 FA 453 + Sbjct: 258 LS 259 >gi|87124553|ref|ZP_01080402.1| RecF protein:ABC transporter [Synechococcus sp. RS9917] gi|86168125|gb|EAQ69383.1| RecF protein:ABC transporter [Synechococcus sp. RS9917] Length = 898 Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats. Identities = 27/226 (11%), Positives = 69/226 (30%), Gaps = 18/226 (7%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--ALPNSDQTLSCSRYRLDRLPRELE 336 + L + +E + + I+ + ++ L L + L R L RL E Sbjct: 240 DQLVQQIDTIERQQLPALQGRIRSQKQRISLLQSLEPLRLRREPLERQRGSLQRLETEAR 299 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI-FLEK 395 E + ++ + + Q + +++Q +EQ + R Sbjct: 300 SQAERQVQLDLALERLQQENDQAVQTCRQQRTDLQALEQQRQALEQRGQTLRRLEERAGL 359 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLIT--RIEFILSHKIKSCHTSVSIT-------- 445 +++ L + R + +KL + ++ ++ Sbjct: 360 EQRCRELEIRRTTVQALQRQRQQLQEKLRRCRSLSAAEHEALQEQRQALEALRIRREAMA 419 Query: 446 --TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINF 489 R+L++ + G ++Q ++Q L + + Sbjct: 420 TRVRLLRASSPVAL---GGAALQVGEERLLSQPFGLTVGEGVELEL 462 >gi|18978227|ref|NP_579584.1| putative transcription-associated protein TFIIS [Pyrococcus furiosus DSM 3638] gi|18894042|gb|AAL81979.1| putative transcription-associated protein TFIIS [Pyrococcus furiosus DSM 3638] Length = 424 Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 20 LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTL 73 + +K + +V +RG+++G + H +F L+D +I ++ + Sbjct: 255 VVKKIKDV--KPYDNVVIRGKVAG-KYWEKGRHVFFELEDETGKIRVAAFEPTKKFRNYV 311 Query: 74 NKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 K+ G E ++ G + F + +E P L+ +E K + + Sbjct: 312 RKLLP----GDEVIIAGGVKEFE--GVLTVNLEKFYPV---NLVPKVEYEKPRCPK 358 >gi|164660680|ref|XP_001731463.1| hypothetical protein MGL_1646 [Malassezia globosa CBS 7966] gi|159105363|gb|EDP44249.1| hypothetical protein MGL_1646 [Malassezia globosa CBS 7966] Length = 879 Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats. Identities = 22/261 (8%), Positives = 77/261 (29%), Gaps = 30/261 (11%) Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 IGH + D A++ + + + A + R ++++ Sbjct: 574 IGHLHRDRITDTASEAEHQHLQHTIRTLRAQLQGINARFDRQRAEMQAANARHMQWEREL 633 Query: 307 LN--SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI- 363 + + + + R R + + +I + + Sbjct: 634 NAKLNSYRDERRAWTVRVQNLERELEQARRMTKSQADVISSMGARLFTAQSDLAMAAPKL 693 Query: 364 ----------HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR-EQTKNR 412 H ++ + +K ++Q ++ + + + ++A+++ R + ++ Sbjct: 694 ARLQRYDASVHRLEGSLSEWEDKLTILDQQREEMNKLLLRFRGMELAVVNSERSARQHSQ 753 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT-RILQSFA-YKNTLKRGYTSIQDTNN 470 + + + + R L K+ H V + L++ + + + + Sbjct: 754 LAESLSFENEQLQRDLHALRTKLLQQHERVQALEEQRLRALSTPQ---------VSMDDV 804 Query: 471 NFITQKRNLATKTRILINFFD 491 + ++ + D Sbjct: 805 RALRS-----KNEQLELELLD 820 >gi|158296271|ref|XP_001688950.1| AGAP006661-PA [Anopheles gambiae str. PEST] gi|157016431|gb|EDO63956.1| AGAP006661-PA [Anopheles gambiae str. PEST] Length = 640 Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 55/149 (36%), Gaps = 8/149 (5%) Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN--RIKSDFLIHNIQK 368 P ++TL +L + E + L+ + ++ ++ ++ + L I K Sbjct: 465 CSNYPELERTLRALEQQLTAVFAEYQ-ALQQRLSQQKMRLEQQVSDEQLTIEPLETKIAK 523 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFL-----EKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + + QQ E +V++ + +++ L EQ ++ I KL Sbjct: 524 QTERLQQLQQRRETVVRELVALAERANERGTLEQRTKELDQRIEQAMEQMESNRKAIVKL 583 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSF 452 + ++ ++ C ++ + L Sbjct: 584 TYDKQQLMEDGLERCRQALEERHQKLADL 612 >gi|220935761|ref|YP_002514660.1| trypsin family protein [Thioalkalivibrio sp. HL-EbGR7] gi|219997071|gb|ACL73673.1| trypsin family protein [Thioalkalivibrio sp. HL-EbGR7] Length = 344 Score = 42.4 bits (98), Expect = 0.19, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Query: 456 NTLKR-GYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKE 506 T++R G + + +T + + +I ++F DG +A VI P + Sbjct: 54 RTIQRVGSGVLVSGDGRIVTAAHVVQSADQIQVSFADGSTVDARVIGSEPAAD 106 >gi|119945049|ref|YP_942729.1| SMC domain-containing protein [Psychromonas ingrahamii 37] gi|119863653|gb|ABM03130.1| SMC domain protein [Psychromonas ingrahamii 37] Length = 1234 Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 62/209 (29%), Gaps = 9/209 (4%) Query: 255 LADYAADLRAPTP-TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 L+D L+ P + P + Q I ++ + ++ + Sbjct: 590 LSDLKKHLQKDNPCPLCGSIEHPSVSNYQPVDIPETQIALSLQEQRLESIREQYSDAKNR 649 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF--NHIINRIKSDFLIHNIQKNRQ 371 + + L+ R + L + LE L Y + L ++++ R Sbjct: 650 IKTDTRQLAEYRLQAANLSQLLEKQLTEWQDSPYLSAFTYQQSSFADLSLLTQSLREKRF 709 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 +I Q+ I+QI Q + + + ++ ++ H R+ Sbjct: 710 NIENLQKQIQQIDAQLPDLREVMQA--LTQKANDHDRLLQQLNNQHAVADNEDQRLAKEQ 767 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + + L LK+ Sbjct: 768 QMLLAQLEENQQGICQQL----PAELLKK 792 >gi|189204800|ref|XP_001938735.1| SH3 domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187985834|gb|EDU51322.1| SH3 domain containing protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 1508 Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 54/176 (30%), Gaps = 7/176 (3%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 ++ D+ A P +++ Q E + R + + Sbjct: 413 HSIDMSRQPVELPPPQAEPPRQYEQHRQYAEEPQQYMEEARYYPEEPQQYMEEPRQYVEP 472 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 Q + P++ + + + ++ ++++ RQHI + + Sbjct: 473 PQQYVEPPQQYMEPPQQYMEEPRQYVEPPQQQAEPLRQHVEQ--PRKSVEQMRQHIEQPR 530 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 Q ++ + R ++++I L E + + L + RIE Sbjct: 531 QQVQPL-----RQHVEPQQQRIEPLRQHTEPPRQHVEPLRQQPEPRRQRIEPSRQQ 581 Score = 40.5 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 8/135 (5%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + + ++ + + + Q + R ++ ++ E L + + + Sbjct: 460 QQYMEEPRQYVEPPQQYVEPPQQYMEPPQQYMEEPRQYVEPPQQQAEP-LRQHVEQPRKS 518 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + I+ +Q RQH+ +QQ IE + R ++ + L E Sbjct: 519 VEQMRQHIEQ--PRQQVQPLRQHVEPQQQRIEPL-----RQHTEPPRQHVEPLRQQPEPR 571 Query: 410 KNRIFYLHTHIKKLI 424 + RI + Sbjct: 572 RQRIEPSRQQSEPQR 586 >gi|124022037|ref|YP_001016344.1| hypothetical protein P9303_03271 [Prochlorococcus marinus str. MIT 9303] gi|123962323|gb|ABM77079.1| Hypothetical protein P9303_03271 [Prochlorococcus marinus str. MIT 9303] Length = 1184 Score = 42.4 bits (98), Expect = 0.20, Method: Composition-based stats. Identities = 25/226 (11%), Positives = 66/226 (29%), Gaps = 17/226 (7%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 ++ + + + ++ + N Q L +++ L+RL ++ Sbjct: 874 WRDQQQELQARRQTLESQQQDLQTRFGEQRRARDAAEAEVANQRQGLQEAQWNLERLRQD 933 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH------- 387 L + + + + + Q ++QI + Sbjct: 934 -RQALAEELRSGGLRLKELQQALPDPPPEIPAELRSAGLEALQADLQQIQSRMEALEPVN 992 Query: 388 ---------LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 L + E++ +L RE+ RI + T ++ + + Sbjct: 993 MLALEELEQLEQRLGDLVERLEVLSQEREELLLRIETVATLRQEAFMEAFEAVDGHFRDI 1052 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 S+S LQ + L+ G T + + + ++ + Sbjct: 1053 FASLSEGDGHLQLDNPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1098 Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 17/168 (10%), Positives = 49/168 (29%), Gaps = 3/168 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + + L K +++ + SR RL + LE R Sbjct: 334 NRRKQLQQEAHSQTEDPHRTALEDAEKTCRDAEAAVEVSRRRLGDVAGRSGAWLEQQRQR 393 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 R + + + + R +++ + +Q + ++++ L Sbjct: 394 SSRR-QELQSTLTPLQQEQQQLQERLRQDGERRVELEAEQQRDGTEDQQVQKQLDQLEQE 452 Query: 406 REQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451 + I +++ + + +++ T + L+S Sbjct: 453 WQALLQNISDKKEQVQQAAESLAVQQRTRSRLEQEQTRLEKEIARLES 500 >gi|296812345|ref|XP_002846510.1| cell division control protein 3 [Arthroderma otae CBS 113480] gi|238841766|gb|EEQ31428.1| cell division control protein 3 [Arthroderma otae CBS 113480] Length = 518 Score = 42.4 bits (98), Expect = 0.21, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 95/317 (29%), Gaps = 29/317 (9%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 210 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 269 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + + PR ++ Sbjct: 270 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQRHHSIQIFEGPRYEL-- 327 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 E+ N E++ A+ ++ + + G + W + D Sbjct: 328 ------DDEETIAENKEIMSKVPFAVVGANSEVTNNEGRKVRGRRYPWGVIEVDNEEHCD 381 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + ++ + ++ + ++ + Sbjct: 382 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 441 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + + + + RQ + EK+ +E Sbjct: 442 HEQKLAKMESEMKMVFQQKVQEKESKLKQSEDELFARHREMKEQLDRQRQELEEKKARLE 501 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 502 SGRPLEDKIKRKGFSLR 518 >gi|258538319|ref|YP_003172818.1| ABC transporter permease [Lactobacillus rhamnosus Lc 705] gi|257149995|emb|CAR88967.1| ABC transporter permease protein [Lactobacillus rhamnosus Lc 705] Length = 1101 Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats. Identities = 11/176 (6%), Positives = 45/176 (25%), Gaps = 2/176 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPREL 335 + +L+ + + +L K L + L+ + + + Sbjct: 205 DFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNKRLKDAPTDRLAAIKKQYQKKIDAG 264 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + L+ + + + +Q L+ Q + Sbjct: 265 QKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQELDTAVKNGQAQIASGEAQLQQA 324 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 +++ K ++ + + ++ + + ++ + L + Sbjct: 325 ATQLSQSESQLASAKQQLEASQQQLDAKQQDLASA-KQQLDTANQQLANSQAQLAA 379 >gi|229550969|ref|ZP_04439694.1| ABC superfamily ATP binding cassette transporter [Lactobacillus rhamnosus LMS2-1] gi|229315661|gb|EEN81634.1| ABC superfamily ATP binding cassette transporter [Lactobacillus rhamnosus LMS2-1] Length = 1097 Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats. Identities = 11/176 (6%), Positives = 45/176 (25%), Gaps = 2/176 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN-SDQTLSCSRYRLDRLPREL 335 + +L+ + + +L K L + L+ + + + Sbjct: 201 DFYMMARITYQNTQKLDPYSDQYTDRIQSHKTALNKRLKDAPTDRLAAIKKQYQKKIDAG 260 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + L+ + + + +Q L+ Q + Sbjct: 261 QKKLDEAKAQLDSAKEQLTTGQQQLASAKQQITAKQQELDTAVKNGQAQIASGEAQLQQA 320 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 +++ K ++ + + ++ + + ++ + L + Sbjct: 321 ATQLSQSESQLASAKQQLEASQQQLDAKQQDLASA-KQQLDTANQQLANSQAQLAA 375 >gi|332306123|ref|YP_004433974.1| chromosome segregation protein SMC [Glaciecola agarilytica 4H-3-7+YE-5] gi|332173452|gb|AEE22706.1| chromosome segregation protein SMC [Glaciecola agarilytica 4H-3-7+YE-5] Length = 1164 Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats. Identities = 14/147 (9%), Positives = 44/147 (29%), Gaps = 4/147 (2%) Query: 307 LNSLLKALPNSDQTLSCS---RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 +++ L + + R + ++ L + + + + Sbjct: 654 RANMISTLESKLPAIQQQCDTAQRSNEQAQQNVERLNQSKEQAQSTLSRCSDALSQKKNH 713 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 +Q ++ Q+ Q + I L+++ +A E+ + L + Sbjct: 714 AQWLTQQQQTNAQRSQKLQVELQKQQEILLKEQADLAETTAQTEELAETLLGLEDQQTDI 773 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQ 450 + L+++++ V L Sbjct: 774 EKQ-REALNNQLREQRHQVDNLKAQLH 799 >gi|80861396|ref|NP_001032221.1| centrobin isoform beta [Homo sapiens] gi|37724707|gb|AAO22136.1| centrobin beta [Homo sapiens] Length = 925 Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|33863851|ref|NP_895411.1| SMC ATPase superfamily chromosome segregation protein [Prochlorococcus marinus str. MIT 9313] gi|33635434|emb|CAE21759.1| putative chromosome segregation protein, SMC ATPase superfamily [Prochlorococcus marinus str. MIT 9313] Length = 1202 Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats. Identities = 24/226 (10%), Positives = 68/226 (30%), Gaps = 17/226 (7%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 ++ + + + ++ + N Q L +++ L+RL ++ Sbjct: 892 WRDQQQELQARRQTLESQQQDLQTRFGEQRRARDAAEAEVANQRQGLQEAQWNLERLRQD 951 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLRYIF 392 L + N + + + + Q ++ Q + L + Sbjct: 952 -RQALTEELRSGGLRLNELQQALPDPPPEIPAELRSAGLEALQADLQKLQSRMEALEPVN 1010 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI---- 448 + E++ L R+ L ++L+ RIE + + + ++ + Sbjct: 1011 MLALEELEQLEQRLGDLVKRLEVLSQEREELLLRIETVATLRQEAFMEAFEAVDGHFRDI 1070 Query: 449 ----------LQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 LQ + L+ G T + + + ++ + Sbjct: 1071 FASLSEGDGHLQLDNPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1116 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 50/168 (29%), Gaps = 3/168 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + + L K +++ + SR RL + LE R Sbjct: 352 NRRKQLQQEAHSQTEDPHRTALEDAEKNCRDAEAAVEVSRRRLGDVAGRSGAWLEQQRQR 411 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 R + + + + R E+++ + +Q + ++++ L Sbjct: 412 SSRR-QELQSTLTPLQQEQQQLQERLRQDEERRVELEAEQQRDGTEDQQVQKQLDQLEQE 470 Query: 406 REQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451 + I +++ + + +++ T + L+S Sbjct: 471 WQTLLQSISDKKEQVQQAAEALAVQQRTRSRLEQEQTRLEKEIARLES 518 >gi|16329834|ref|NP_440562.1| DNA polymerase III subunit alpha [Synechocystis sp. PCC 6803] gi|1652319|dbj|BAA17242.1| DNA polymerase III alpha subunit [Synechocystis sp. PCC 6803] Length = 458 Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 32/58 (55%), Gaps = 2/58 (3%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 + +L+D + +A+++ +++ + EG + ++ GK+ +YQ+I+E L P Sbjct: 310 FLTLEDMSGQSEAVVFPSNYERLQDVLIEGSQQMIWGKVD--RRDDQYQLIVEDLEPV 365 >gi|167517193|ref|XP_001742937.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778036|gb|EDQ91651.1| predicted protein [Monosiga brevicollis MX1] Length = 700 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 23/195 (11%), Positives = 57/195 (29%), Gaps = 28/195 (14%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + + L + L K + ++ + ++ + S R R + L Sbjct: 78 QSRLQAAEKENQELRRELKLLEKIQRRQTKAIDQYEGSNSELPSQLRQREEEL------- 130 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + R+ +++ K+ Q + +K + +E +VK E+ Sbjct: 131 --RALREQMRNLKARNTELEASH--QKKDKHMQQVRDKARRLESLVKDKDLLEAATATER 186 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFI-----------------LSHKIKSCHTS 441 + L + + L H L ++ L +I+ Sbjct: 187 VHQLEQELQTKNEAVSKLQHHCDLLQKQLARAEASQGKQVSQVKGEVSHLERRIEELEDK 246 Query: 442 VSITTRILQSFAYKN 456 ++ R L+ Sbjct: 247 LAARDRQLEKLNILA 261 >gi|300797921|ref|NP_001179556.1| serine/threonine-protein kinase 10 [Bos taurus] gi|297487538|ref|XP_002696297.1| PREDICTED: serine/threonine kinase 10 [Bos taurus] gi|296475893|gb|DAA18008.1| serine/threonine kinase 10 [Bos taurus] Length = 967 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 15/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + L + + ++ + + L+K R+ L R Sbjct: 719 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELLRKHE 776 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + K+ + + + ++ + +Q Sbjct: 777 KEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGGSAAEQRE 836 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + + CH + T+ Sbjct: 837 KIKQFSQQEEKRQKAERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLLIEHETQK 896 Query: 449 LQSFA 453 L++ Sbjct: 897 LKALD 901 >gi|195040128|ref|XP_001991006.1| GH12443 [Drosophila grimshawi] gi|193900764|gb|EDV99630.1| GH12443 [Drosophila grimshawi] Length = 1053 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 56/172 (32%), Gaps = 8/172 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + V + N E + + K +L N Q + R+ + Sbjct: 671 GDRKVFDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 730 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 ++ R+ H ++ L + K +Q + + + +K H + Sbjct: 731 AQKQYIELEMRKFKRRRMTHQH---DLEDHLLRDELSKKQQQLEQAHAML---LKHHEKT 784 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440 LE +++ ++ + EQ + + + + RI+ L K ++ Sbjct: 785 QELEYRQQKSVHQLREEQINKQHDTEFHNQEDYMDRIKKDLQRKHALELRQQ 836 >gi|256389566|ref|YP_003111130.1| single-strand binding protein [Catenulispora acidiphila DSM 44928] gi|256355792|gb|ACU69289.1| single-strand binding protein [Catenulispora acidiphila DSM 44928] Length = 219 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109 KD + + IW+ + G+ +V G++ ++ + ++ +E + Sbjct: 48 KDGDALFLRCSIWRQAAENVAESLTRGMRVIVSGRLRQRSYETKEGEKRTVVELDVEEIG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|317139349|ref|XP_001817449.2| cell division control protein 3 [Aspergillus oryzae RIB40] Length = 461 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 81/275 (29%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N + PTG ++ + + R +V + PV + D E Sbjct: 189 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAQFK 248 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHETD 252 Q + I R E+ N E++ A+ ++ + +A G + Sbjct: 249 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANAEVATADGRKVR 306 Query: 253 -------WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 D + ++ E ++ + ++ + Sbjct: 307 GRSYPWGTIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNHLYENYRSDKLTQMGVAQDP 366 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 367 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 426 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 427 DQLERQRQELDEKKSRLESGRPIEEKGKRKGFSLR 461 >gi|222528287|ref|YP_002572169.1| hypothetical protein Athe_0246 [Caldicellulosiruptor bescii DSM 6725] gi|222455134|gb|ACM59396.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM 6725] Length = 212 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 6/87 (6%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ +Q + ++ ++++ ++ R +E++ + ++ + R+ + + + Sbjct: 22 LEEVKQRLDRVEERLDRVEERLDR-----VEERLDRVEERLDRVEERLDRVEKRLDAVEK 76 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSF 452 R++ + ++ + + + L + Sbjct: 77 RLD-AVEQRLDAVEQRLDAVEQRLDTL 102 >gi|157273447|gb|ABV27346.1| DNA polymerase III alpha subunit [Candidatus Chloracidobacterium thermophilum] Length = 445 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 5/101 (4%) Query: 35 VCVRGEISGYRGIH-SSGHAY--FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 V + G +S + + G + F+L+D I+ I W T + +G LV G+ Sbjct: 282 VRMGGIVSNFVVKNTKKGDRFAVFTLEDETGSIEVIAWPETFRRFGEQVTDGAAVLVTGR 341 Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 + G +II E+ P +G + + + L Sbjct: 342 VEVEAGKPT-KIIAEAAEPL-AGIRERHAKGIILRFPADSL 380 >gi|238482571|ref|XP_002372524.1| septin AspB [Aspergillus flavus NRRL3357] gi|220700574|gb|EED56912.1| septin AspB [Aspergillus flavus NRRL3357] Length = 523 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 81/275 (29%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N + PTG ++ + + R +V + PV + D E Sbjct: 251 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAQFK 310 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHETD 252 Q + I R E+ N E++ A+ ++ + +A G + Sbjct: 311 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANAEVATADGRKVR 368 Query: 253 -------WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 D + ++ E ++ + ++ + Sbjct: 369 GRSYPWGTIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNHLYENYRSDKLTQMGVAQDP 428 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 429 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 488 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 489 DQLERQRQELDEKKSRLESGRPIEEKGKRKGFSLR 523 >gi|47224891|emb|CAG06461.1| unnamed protein product [Tetraodon nigroviridis] Length = 929 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 18/173 (10%), Positives = 48/173 (27%), Gaps = 6/173 (3%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 KE L+ ++ I + S + DRL E Sbjct: 437 EKEQLRLRWDRMQMSNFTCITNITHTSQLREESEGLLKQLRTSLEAERAEERDRLEAEKR 496 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 +E + + + + S +Q ++ + ++ + K Sbjct: 497 QEMERLKKESELESSQRKSWLSS------LQDEKERLQAAHSEQLGKLRLQFDKQMEQMK 550 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + +Q +I ++ R++ H+++ + + L Sbjct: 551 LEHSRRESKLQQVAEQIKLRAKELETQEARLQTKAFHRLRLERDLLKEELQRL 603 >gi|88807230|ref|ZP_01122742.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. WH 7805] gi|88788444|gb|EAR19599.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. WH 7805] Length = 1183 Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 66/226 (29%), Gaps = 17/226 (7%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + + + + + ++ Q L +R+ L+RL E Sbjct: 873 WRQQHQDLNRRRDALNAQQQDLQTRFGEERRARDEAEASVAEQRQGLQQARWELERLREE 932 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFL----------------IHNIQKNRQHILEKQQ 378 LE + + + + + + R LE Sbjct: 933 -RIGLEEQLRSGSMRLDELKSSLPDPLPEISDAVRDGGLEALQEQLQQLQRRMEALEPVN 991 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + Q L + E++ +L RE+ RI + T ++ + + Sbjct: 992 MLALEELQELEQRLGDLGERLELLSQEREELLLRIETVATLRQEAFMEAFEAVDGHFREI 1051 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 S+S LQ ++ L+ G T + + + ++ + Sbjct: 1052 FASLSDGDGKLQLDNPEDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1097 >gi|313108400|ref|ZP_07794416.1| hypothetical protein PA39016_001340017 [Pseudomonas aeruginosa 39016] gi|310880918|gb|EFQ39512.1| hypothetical protein PA39016_001340017 [Pseudomonas aeruginosa 39016] Length = 455 Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 21/220 (9%), Positives = 55/220 (25%), Gaps = 19/220 (8%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + A +MA + + A + + + + Sbjct: 135 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAAPAEPPRKQEDEQAARLAQLVKQQRQQL 194 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 RL L R+ E L + + + + L +++ + E Q Sbjct: 195 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 252 Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422 Q + + +Q R ++ + L + + + Sbjct: 253 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAVAVAGYKEQVSI 312 Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + L +++ + L + + L+R Sbjct: 313 RDVELAYRNELDQQLEQELAELRAERDRLAALGPEQLLER 352 >gi|297563758|ref|YP_003682732.1| single-strand binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848206|gb|ADH70226.1| single-strand binding protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 195 Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 30/72 (41%), Gaps = 12/72 (16%) Query: 48 HSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSS 99 +SG KD S + +W+ + + G+ +V G++ ++ + Sbjct: 42 RASGEW----KDGESMFLTCTVWRQYAENVAESLQRGMRVIVQGRLKQRSYETREGEKRT 97 Query: 100 KYQIIIESLIPS 111 ++I ++ + P+ Sbjct: 98 VFEIDVDEVGPA 109 >gi|115449333|ref|XP_001218580.1| predicted protein [Aspergillus terreus NIH2624] gi|114187529|gb|EAU29229.1| predicted protein [Aspergillus terreus NIH2624] Length = 340 Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 68/238 (28%), Gaps = 3/238 (1%) Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 L IV+ ++I ++A G+ T+ A + Sbjct: 20 GYHGLCLLCVLFIVQVALGTTITALAAKGYHPMSTITALAGTNTGVVALVIVLQPFYQRR 79 Query: 280 HLQSSLINLEA--RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 + + E+ I L ++ + SL L ++L R + ++ Sbjct: 80 KENKNQRDEESVLPGWAEIDSLERHLGAQICSLKLHLSAQMESLERHLRRQFQRHPNGQN 139 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 N ++ L H + + + H++++++ + + Sbjct: 140 NNPREKYKNKADNILEHIEDFKQDLQHQFDIYQHDLGAQLHHLKKVLQVKIGTFEQGIRA 199 Query: 398 KIAILHMLREQT-KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 +I ++ N L I R++ +S ++ + + Sbjct: 200 QIHNSQYNLQEPIYNDQQELWVRIIPFKKRLQETISQVLQRQIHVLQDIRAQIDGIQP 257 >gi|228476930|ref|ZP_04061575.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus salivarius SK126] gi|228251504|gb|EEK10649.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus salivarius SK126] Length = 741 Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 11/120 (9%) Query: 5 SQKNSLDH-PEYSVSELS-YHLKHI-------VESNLSHVCVRG-EISGYRGIHSSG-HA 53 S KN+L+ E +SELS +K + +++ +R ++ R + +G H Sbjct: 451 SAKNTLNLDEELQLSELSLDTIKSLEKLAPFGMDNKKPVFWLRDITVTQARTMGQNGAHL 510 Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 F +K D + + EF +G+E V + + G + Q+++E G Sbjct: 511 KFKVKQGKDSFDVVAFNKGNLLQEFQQAQGLELAVTLSVNVWNGQTTLQLMLEDARVDGV 570 >gi|86607501|ref|YP_476264.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab] gi|86556043|gb|ABD01001.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab] Length = 1180 Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 49/169 (28%), Gaps = 5/169 (2%) Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII--IFR 345 + + + L L +L + RL ++ + + + + R Sbjct: 730 QAQQYLERHQADCQNQQARLQHLQGSLAQWQSESQQIQERLHQIQLRWDPLQQRLADLAR 789 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILH 403 K L +Q+ H+ E Q H+ + +Q + + K+ +I Sbjct: 790 KLSQLEGSPVNQHWQQLQQAVQQQESHLAELQHHLAHLERQQQENLSQQHLKQAQIQHHQ 849 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 ++ + R L I + + + I + L Sbjct: 850 ERLQEGERRQAQLQEQIAQAQATLAH-IQQHIAEQRQQMGQIEARLAHL 897 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 21/208 (10%), Positives = 62/208 (29%), Gaps = 2/208 (0%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + Q I ++++ L+ L + + + +L+ Sbjct: 883 QRQQMGQIEARLAHLRQERERQEFQLRAQQQQLQRLEWERYHALTQQQEKEAILAQLQAQ 942 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQHLRYIFLEKK 396 L+ + + D L +K + + + + + ++ + Sbjct: 943 LQAAAQELPDPLPPLPPHLTLDELQRQKRKIEEQLRSLEPVNMLAIAEYEQIQARLGDLN 1002 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 K+ LH R + RI T ++ ++ ++ +S L+ ++ Sbjct: 1003 AKLETLHQERTELLLRIENFSTLRRQAFLDAFHAINGHFQTIFAQLSEGEGYLELENPED 1062 Query: 457 TLKRGYTSIQDTNNNFITQKRNLATKTR 484 L G T + + + ++ + Sbjct: 1063 PLAGGLTLVARPKGKPVRRLSAMSGGEK 1090 >gi|254167904|ref|ZP_04874753.1| conserved domain protein [Aciduliprofundum boonei T469] gi|197623195|gb|EDY35761.1| conserved domain protein [Aciduliprofundum boonei T469] Length = 439 Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 16/94 (17%) Query: 22 YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75 +K + +V +RG++ GHA F ++D+ +ID ++ T+NK Sbjct: 271 RRIKEV--KEYQNVILRGKVVKEARKIEGGHAIFQIEDSTGKIDCAAYEPTKNFRNTINK 328 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 ++ G E V G + I IE + Sbjct: 329 LKV----GDEVEVYGSVRD-EPR---TINIEKIR 354 >gi|332847244|ref|XP_523825.3| PREDICTED: centrobin [Pan troglodytes] Length = 903 Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|119610513|gb|EAW90107.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_d [Homo sapiens] gi|261858904|dbj|BAI45974.1| centrobin, centrosomal BRCA2 interacting protein [synthetic construct] Length = 903 Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|21887052|gb|AAL56068.2|AF331638_1 PP1221 [Homo sapiens] Length = 903 Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|191252785|ref|NP_444279.2| centrobin isoform alpha [Homo sapiens] gi|74728485|sp|Q8N137|CNTRB_HUMAN RecName: Full=Centrobin; AltName: Full=Centrosomal BRCA2-interacting protein; AltName: Full=LYST-interacting protein 8 gi|21594796|gb|AAH21134.1| Centrobin, centrosomal BRCA2 interacting protein [Homo sapiens] gi|21739441|emb|CAD38763.1| hypothetical protein [Homo sapiens] gi|37724705|gb|AAO22135.1| centrobin alpha [Homo sapiens] gi|123982446|gb|ABM82964.1| centrobin, centrosomal BRCA2 interacting protein [synthetic construct] gi|123997107|gb|ABM86155.1| centrobin, centrosomal BRCA2 interacting protein [synthetic construct] Length = 903 Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|83749426|ref|ZP_00946419.1| Hypothetical Protein RRSL_00453 [Ralstonia solanacearum UW551] gi|207738950|ref|YP_002257343.1| hypothetical protein RSIPO_03645 [Ralstonia solanacearum IPO1609] gi|83723906|gb|EAP71091.1| Hypothetical Protein RRSL_00453 [Ralstonia solanacearum UW551] gi|206592321|emb|CAQ59227.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609] Length = 698 Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 62/281 (22%), Gaps = 42/281 (14%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D + + L + + L Sbjct: 340 LDAHRQSNEALAEHWRTSLDRLTDTFDHRSAGLLEGVAARLDTTASRMSQAWTEALSQQD 399 Query: 316 NSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ L+ R L + + R + + + S Sbjct: 400 QANAQLTGQHQRALEAATATFEQHAATLQRTLHQSHADLQAGLASRDEQRLAAWTDTLGS 459 Query: 360 DF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 L + QQ + + + IA L L + Sbjct: 460 MATTLSQQWDQAGARTASHQQAICETLARTAHDISARTQAHASDTIAELSRLVQAASEAP 519 Query: 414 FYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 + +L ++ + ++ ++ +L + + +T +R + Sbjct: 520 KAAAEVVAELRQKLSDSMVRDTEMLEERGRLLATVQTLLDAVNHASTEQR-----TAVDG 574 Query: 471 NFITQKRNLATKTRILINFFD---------GQANAIVINKA 502 T L R+ F D G A A V A Sbjct: 575 LISTSADLL---DRVGTRFADQVQAEGERLGTAAAQVTGSA 612 >gi|194766886|ref|XP_001965555.1| GF22554 [Drosophila ananassae] gi|190619546|gb|EDV35070.1| GF22554 [Drosophila ananassae] Length = 2609 Score = 42.0 bits (97), Expect = 0.24, Method: Composition-based stats. Identities = 22/195 (11%), Positives = 68/195 (34%), Gaps = 17/195 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 K + ++ + + + K+ L+ L +Q LS +L + ++ Sbjct: 1167 QQEKLSEKQQKLSEQQEKLSEQEEKLSEKVQKLSEQETKLSEQEQKLSEQEQKLSQQEKK 1226 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQK----------------NRQHILEKQ 377 + E +I ++ +H I N IH ++K NR+ + Sbjct: 1227 ISEQEEQLIRKEEKHLEEIKNMKADCSGSIHQLEKEHWKQVQGLQEELAETNREMCKQLS 1286 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 H +++ + + + + + E++ + + + +++ + R + + +I Sbjct: 1287 DHAQEMRQLQQKAVDIHRLEELKTANAEMVAERKDMEVQLKQLEEEMKREKQLAQQEIDQ 1346 Query: 438 CHTSVSITTRILQSF 452 + + + + Sbjct: 1347 LKARLRESEEQMDAL 1361 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 46/176 (26%), Gaps = 10/176 (5%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338 +LE +I + K + L + L +L Sbjct: 550 QNSDLERSSAEMIQKYEKELQAVKEHCERELQEQKHCHEAIQRHDKELREKLAEADDHLE 609 Query: 339 -LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 ++ + K F + +K + + R L QQ + + + + K Sbjct: 610 KMKQQLVEKEEQFAQLGRNLKVICEKNKDLECRAARLHNQQELVRAKYLQCQQQLVAKTT 669 Query: 398 KIAILHMLREQTKNRIFYLH-THIKKLITRI---EFILSHKIKSCHTSVSITTRIL 449 I+ L + + + R+ L ++ + + L Sbjct: 670 DISQLADNLDTADWDSTLARIDEVIEARNRLIAENSALQSELLQNRERIQTAEQRL 725 >gi|109113169|ref|XP_001111510.1| PREDICTED: centrobin-like isoform 1 [Macaca mulatta] Length = 923 Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 10/169 (5%), Positives = 49/169 (28%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + + S + L + R + +L+ + + + Sbjct: 319 EAEQQRCCALQEERDAARAGQLSEHRELETLRAAIEEERQTWAQQEHQLKEHYQALQEEN 378 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 379 QAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 438 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 439 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 487 >gi|284034856|ref|YP_003384787.1| single-strand binding protein [Kribbella flavida DSM 17836] gi|283814149|gb|ADB35988.1| single-strand binding protein [Kribbella flavida DSM 17836] Length = 192 Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 24/70 (34%), Gaps = 7/70 (10%) Query: 48 HSSGHAYFSLKDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQII 104 SG KD S + +W+ + + G+ +V G++ T+ + Sbjct: 42 RQSGEW----KDGESLFLSCAVWRQAAENVAESLQRGMRVIVQGRLKSRTYDDREGNKRT 97 Query: 105 IESLIPSGSG 114 + + G Sbjct: 98 VFEIDVDEVG 107 >gi|301788063|ref|XP_002929452.1| PREDICTED: peripheral-type benzodiazepine receptor-associated protein 1-like [Ailuropoda melanoleuca] Length = 1864 Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 74/259 (28%), Gaps = 24/259 (9%) Query: 199 TLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI-----GHETDW 253 + R P A GS + F D + A +++ S + GH Sbjct: 275 QRQIDRPRPPGGGGASASAPGSSPPPF-FADFEMGWAGGQAALGPCSQVPAPIPGHFQAT 333 Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 D P E + S ++ + + + + + K L Sbjct: 334 PQEDV-----ENPPAILGEPERQQRVQQLESELSKKRKKCESLEQEARKKQRRCEELELQ 388 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + RL ++ + + D + Q + + Sbjct: 389 LREAQNENARLVEENSRLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKL 448 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 +Q ++ + + R LE + + A L + +Q + R R++ + Sbjct: 449 EGLEQVLKHMREAAQRRRQLEVEHEQARLSLQEKQEEVR-------------RLQQAQAE 495 Query: 434 KIKSCHTSVSITTRILQSF 452 + +V + L S Sbjct: 496 AKREHEGAVQLLESTLDSM 514 >gi|238021325|ref|ZP_04601751.1| hypothetical protein GCWU000324_01224 [Kingella oralis ATCC 51147] gi|237868305|gb|EEP69311.1| hypothetical protein GCWU000324_01224 [Kingella oralis ATCC 51147] Length = 880 Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 15/183 (8%), Positives = 52/183 (28%), Gaps = 7/183 (3%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 + S+ +N + + + + + N Q ++ Sbjct: 1 MADNNLVLRIIMNASDRASNAMNRVRDAASGLSGRLGRLQQAFDRSARNRNNLTQYINQ- 59 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R + +L ++++ + I + +Q++ + ++ Q ++Q Sbjct: 60 RQAMRQLDAQMQNTQQRIQSLAQTQRQQGSLTREQQREWTQLQRSMRQSQQEYQRLQQSS 119 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 + I +++ R+ H + R E +++ Sbjct: 120 HALGNEL-----RTQGISTTRLRESQARLNREHDEAAHALER-ERAALNRLDRARERSQR 173 Query: 445 TTR 447 ++ Sbjct: 174 MSQ 176 >gi|145539446|ref|XP_001455413.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124423221|emb|CAK88016.1| unnamed protein product [Paramecium tetraurelia] Length = 555 Score = 42.0 bits (97), Expect = 0.25, Method: Composition-based stats. Identities = 21/189 (11%), Positives = 58/189 (30%), Gaps = 10/189 (5%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + + + +L + + L L S + L R +RL Sbjct: 256 VLEDLKKSRERVEDLRRSRERLEYMQDLKRSRERIEQLDDLRRSRERLDDLRRSRERLED 315 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + + + + + ++ Q + + ++ +E + K R L Sbjct: 316 LKKSRERLSQLEELKRSRQRMEELEELKKSRERQAQIDELKKSRERLEDLRKSRERLEQL 375 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTH------IKKLITRIEFILSHK----IKSCHTSVS 443 E++ K ++++RI L ++ R+E + K ++ + Sbjct: 376 EQERKNQEKIEELRKSRSRIEELQKQRRKVEELRTSQERLEQLKKQKEEIELRRSQERLE 435 Query: 444 ITTRILQSF 452 + + Sbjct: 436 DLRKSRERL 444 >gi|169348422|ref|ZP_02866360.1| hypothetical protein CLOSPI_00137 [Clostridium spiroforme DSM 1552] gi|169293891|gb|EDS76024.1| hypothetical protein CLOSPI_00137 [Clostridium spiroforme DSM 1552] Length = 1017 Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 1 MNPFS-QKNSLDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD 59 M+P + K +L+ SVSEL ++ V ++ V+ I +G + D Sbjct: 912 MHPIALIKQNLNLKIISVSELHNNIDKYVTIVMAISRVKA-IVDKKGQE---MCFVDGYD 967 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105 ID +++ ++ + G L+ G++ K ++I Sbjct: 968 ETGEIDGVVFANNYQTLKNVLVRGDICLIEGQVKF---RDKLSLVI 1010 >gi|312864545|ref|ZP_07724776.1| DNA polymerase III, alpha subunit [Streptococcus downei F0415] gi|311099672|gb|EFQ57885.1| DNA polymerase III, alpha subunit [Streptococcus downei F0415] Length = 1035 Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 6/81 (7%) Query: 34 HVCVRGEISGYRGIH--SSG--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89 V V G+I R I S G A+ SL D ++D ++ + K +EG + + Sbjct: 887 QVRVLGQIEAVRVIRTKSKGQQMAFVSLTDTKQKLDVTVFPESYQKWRDWLKEGQIYYMT 946 Query: 90 GKITTFPGSSKYQIIIESLIP 110 GK+ Q+I++++ P Sbjct: 947 GKVR--ERDGHLQLILQAIEP 965 >gi|269217870|ref|ZP_06161724.1| single-strand binding protein [Actinomyces sp. oral taxon 848 str. F0332] gi|269212805|gb|EEZ79145.1| single-strand binding protein [Actinomyces sp. oral taxon 848 str. F0332] Length = 176 Score = 42.0 bits (97), Expect = 0.26, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Query: 59 DNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FPGSSK----YQIIIESLIPS 111 D + I +W+ + +G+ LV G++T + + + ++ ++ + PS Sbjct: 49 DGEAMFIRCSVWREHGENVAESLSKGMRVLVTGRLTVRSYEYNGQQRTSLEMQVDEIGPS 108 >gi|257093175|ref|YP_003166816.1| hypothetical protein CAP2UW1_1573 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045699|gb|ACV34887.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 717 Score = 42.0 bits (97), Expect = 0.27, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 47/161 (29%), Gaps = 5/161 (3%) Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + L + +AL + R L + + + + Sbjct: 21 RHQQLANKSQALDEALHHFLDQRPVGKNLSWLDRATGLAAAPFWREADVVNASELSALAM 80 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 ++ +E + + V LR+ K L ++R+ I Sbjct: 81 SRILRHESAISVELLEQLSHAVPDTLRWAIRYSKLFARTDSALWTLLRDRVQGEEWRIFI 140 Query: 423 -LITRIEFILS---HKIKSCHTSVSITTRILQSFAYKNTLK 459 + R+ L I+ ++ + +L++ +Y + L Sbjct: 141 GVCDRLLAQLQPFDQLIQRAQKQLAYLS-LLETLSYLSVLA 180 >gi|327303746|ref|XP_003236565.1| hypothetical protein TERG_03608 [Trichophyton rubrum CBS 118892] gi|326461907|gb|EGD87360.1| hypothetical protein TERG_03608 [Trichophyton rubrum CBS 118892] Length = 363 Score = 41.7 bits (96), Expect = 0.28, Method: Composition-based stats. Identities = 35/317 (11%), Positives = 92/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 49 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 108 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 109 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQHHSIQIFE 166 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ + SA G + W + D Sbjct: 167 GPRYELDDEETIAENKEIMSKVPFAVVGANSEVTSADGRKVRGRRYPWGVIEVDNEEHCD 226 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + ++ + ++ + ++ + Sbjct: 227 FVKLRQMLIRTHMEELKEHTNNTLYENYRSDKLTQMGVTQDPSVFKEVNPAVKQEEERAL 286 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + + + RQ + EK+ +E Sbjct: 287 HEQKLAKMEAEMKMVFQQKVQEKESKLKQSEEELFARHREMKEQLDRQRQELEEKKARLE 346 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 347 SGRPLEDKIKRKGFSLR 363 >gi|60360472|dbj|BAD90480.1| mKIAA4026 protein [Mus musculus] Length = 986 Score = 41.7 bits (96), Expect = 0.28, Method: Composition-based stats. Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + ++ ++ + Sbjct: 716 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 775 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ + Sbjct: 776 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 835 Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ + +Q + ++E+ +Q + + + + + Sbjct: 836 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 895 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + CH V T+ L++ Sbjct: 896 MSELQQLQNEKCHLLVEHETQKLKALD 922 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D A + + L+ + + K +K Q Sbjct: 649 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 702 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + + RL R+ + + R R D + K ++ + +++ + Sbjct: 703 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 762 Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + L+ K+++ + R + +++ R+ L + + Sbjct: 763 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 822 Query: 440 TSV 442 + Sbjct: 823 ARL 825 >gi|115400025|ref|XP_001215601.1| cell division control protein 3 [Aspergillus terreus NIH2624] gi|114191267|gb|EAU32967.1| cell division control protein 3 [Aspergillus terreus NIH2624] Length = 405 Score = 41.7 bits (96), Expect = 0.28, Method: Composition-based stats. Identities = 32/275 (11%), Positives = 82/275 (29%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N I PTG ++ + + R +V + PV + D E + Sbjct: 133 NRTNIIDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEISLFK 192 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEM-------IVRAIANSSIPIISAI- 247 Q + I R E+ N E+ +V A + P + Sbjct: 193 Q--RILADIQHHNIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANNEITTPDGRKVR 250 Query: 248 GHETDWTLA--DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 G W + D + ++ + E ++ + ++ + Sbjct: 251 GRSYPWGVIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNMLYENYRSDKLTQMGVAQDP 310 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 311 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 370 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 371 DQLERQRQELEEKKARLESGRPIEEKGKRKGFSLR 405 >gi|22299718|ref|NP_682965.1| hypothetical protein tlr2175 [Thermosynechococcus elongatus BP-1] gi|22295902|dbj|BAC09727.1| tlr2175 [Thermosynechococcus elongatus BP-1] Length = 1003 Score = 41.7 bits (96), Expect = 0.28, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 68/216 (31%), Gaps = 21/216 (9%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 ADL A P AA ++ + + + + +L+ + L + Sbjct: 277 IADLEARAPLLAAAVSQWQSLKTAEAQLQQCFANYQQLRQERDRHQQSLDQQRQDLLRTL 336 Query: 319 QTLSCSRYRLDRLPRELEHNLEI---------IIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + L ++LE L+ + R H + F + ++ Sbjct: 337 HGLESQQQFLLEQCQQLEKLLKQENQIVAAFEQLQRARAHLQAQEALQQKVFPLLQAKQR 396 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT-----------KNRIFYLHT 418 + ++Q+ + + L+ ++ ++I L+E K RI+ H Sbjct: 397 LELERQQQEQRLRSRRDELQQLWQHLHQQIERQPALQEAVTLITAQIATLEKQRIYQDHV 456 Query: 419 HIKKL-ITRIEFILSHKIKSCHTSVSITTRILQSFA 453 K L R L + + + + L+ Sbjct: 457 REKGLERRRFLEQLQTRQREYERQIHQLEQRLELLN 492 >gi|154335920|ref|XP_001564196.1| kinesin [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061230|emb|CAM38252.1| putative kinesin [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1097 Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 18/197 (9%), Positives = 63/197 (31%), Gaps = 9/197 (4%) Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + + LQ + ++ + K + L + ++ L+ Sbjct: 714 HFDDIDIVMALVREKETLLQRACEDILDTNTESAAAVEKMLREREHDLRETKRLHEEKLA 773 Query: 323 CSRYRL----DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNIQKNRQHI 373 R E + ++ R + R++ I ++ ++ + Sbjct: 774 AQAERFCTRLKEASDENAAQQQQLLDRHRDAIAQLEERLQRSREISEIELKRSEEAKEQL 833 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ Q ++ ++ + + ++ R ++ + + L ++ TR++ + H Sbjct: 834 KQRMQVAQERMRHEYQQEIERLRARLDGDIGDRHKSVDALRQLQEMHEREATRLKDEMDH 893 Query: 434 KIKSCHTSVSITTRILQ 450 +S + + L+ Sbjct: 894 LRRSRDSDCARLQNQLE 910 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 14/155 (9%), Positives = 44/155 (28%), Gaps = 1/155 (0%) Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + + ++ ++ + + L + + E +E ++ + Sbjct: 707 LYHRVLPHFDDIDIVMALVREKETLLQRACEDILDTNTESAAAVEKMLREREHDLRE-TK 765 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 R+ + L ++ + E +Q L + L RE ++ + Sbjct: 766 RLHEEKLAAQAERFCTRLKEASDENAAQQQQLLDRHRDAIAQLEERLQRSREISEIELKR 825 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 ++L R++ + L Sbjct: 826 SEEAKEQLKQRMQVAQERMRHEYQQEIERLRARLD 860 >gi|220910351|ref|YP_002485662.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425] gi|219866962|gb|ACL47301.1| TPR repeat-containing protein [Cyanothece sp. PCC 7425] Length = 699 Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 21/180 (11%), Positives = 66/180 (36%), Gaps = 1/180 (0%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + E+ Q+ + + ++ + + K + + K + Q L + + Sbjct: 109 DQLGEEAENFQTEVEQQRQTITGLVASVDRLKQEQVTTWTKEQEAARQQLQTAIASFNTD 168 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 +L+ NL+ + + + L ++ + E +Q++E + Q + + Sbjct: 169 LHQLQDNLQSRKTQIEQGLAR-AQTEFATRLDQLQKETQTKHSEIRQYLESLPTQMIPQL 227 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 ++ L ++QT + L ++R++ ++ ++ ++S L + Sbjct: 228 EELRQAAQHQLQQQQQQTLETLQKLEREFSGQLSRLQSAAQNQQEATEQTLSSLQAQLTA 287 >gi|148691804|gb|EDL23751.1| serine/threonine kinase 10 [Mus musculus] Length = 946 Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + ++ ++ + Sbjct: 676 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 735 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ + Sbjct: 736 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 795 Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ + +Q + ++E+ +Q + + + + + Sbjct: 796 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 855 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + CH V T+ L++ Sbjct: 856 MSELQQLQNEKCHLLVEHETQKLKALD 882 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D A + + L+ + + K +K Q Sbjct: 609 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 662 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + + RL R+ + + R R D + K ++ + +++ + Sbjct: 663 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 722 Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + L+ K+++ + R + +++ R+ L + + Sbjct: 723 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 782 Query: 440 TSV 442 + Sbjct: 783 ARL 785 >gi|117616478|gb|ABK42257.1| Stk10 [synthetic construct] gi|118763622|gb|AAI28364.1| Serine/threonine kinase 10 [Mus musculus] Length = 966 Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + ++ ++ + Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ + Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 815 Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ + +Q + ++E+ +Q + + + + + Sbjct: 816 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 875 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + CH V T+ L++ Sbjct: 876 MSELQQLQNEKCHLLVEHETQKLKALD 902 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D A + + L+ + + K +K Q Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + + RL R+ + + R R D + K ++ + +++ + Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742 Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + L+ K+++ + R + +++ R+ L + + Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802 Query: 440 TSV 442 + Sbjct: 803 ARL 805 >gi|109113171|ref|XP_001111594.1| PREDICTED: centrobin-like isoform 3 [Macaca mulatta] Length = 901 Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 10/169 (5%), Positives = 49/169 (28%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + + S + L + R + +L+ + + + Sbjct: 319 EAEQQRCCALQEERDAARAGQLSEHRELETLRAAIEEERQTWAQQEHQLKEHYQALQEEN 378 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 379 QAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 438 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 439 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 487 >gi|126362973|ref|NP_033314.2| serine/threonine-protein kinase 10 [Mus musculus] gi|56207153|emb|CAI25517.1| serine/threonine kinase 10 [Mus musculus] Length = 966 Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 15/207 (7%), Positives = 56/207 (27%), Gaps = 10/207 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + ++ ++ + Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ + Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 815 Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ + +Q + ++E+ +Q + + + + + Sbjct: 816 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 875 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + CH V T+ L++ Sbjct: 876 MSELQQLQNEKCHLLVEHETQKLKALD 902 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D A + + L+ + + K +K Q Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + + RL R+ + + R R D + K ++ + +++ + Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742 Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + L+ K+++ + R + +++ R+ L + + Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802 Query: 440 TSV 442 + Sbjct: 803 ARL 805 >gi|78063640|ref|YP_373548.1| hypothetical protein Bcep18194_B2793 [Burkholderia sp. 383] gi|77971525|gb|ABB12904.1| hypothetical protein Bcep18194_B2793 [Burkholderia sp. 383] Length = 448 Score = 41.7 bits (96), Expect = 0.30, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 65/218 (29%), Gaps = 17/218 (7%) Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 R L L + + + + R E L I R+ Sbjct: 150 WALMTHPRTTMGVRQAAFGDLHMLSHLVGSANRADIRRLVALEEENAALHAKIERQQARL 209 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + + + RQ+ +++ + LR + E++A+ RE Sbjct: 210 QEMSAQRDAALQERDALAARQNAQPLAAENVLREEVHELREALAARDERLALHTSRREAA 269 Query: 410 KNRIFYLHTHIKKLITRIE--FILSHKIKSCHTSVSITTR------ILQSFAYKNTLKRG 461 + RI + + R++ + +++ +++ + ++ + L+ G Sbjct: 270 EQRIAAEQASARAMRARLDDLMAMVKTLRAEASAIEQAVQASADDPAERAADPLSILQ-G 328 Query: 462 ----YTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 Y + +N I + A DG Sbjct: 329 TRLVYVGGRPGSNRAIKRIVETAGGEM---TLHDGGIE 363 >gi|118395962|ref|XP_001030325.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena thermophila] gi|89284624|gb|EAR82662.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena thermophila SB210] Length = 3175 Score = 41.7 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 49/164 (29%), Gaps = 9/164 (5%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD--- 360 + + + N ++ L+ LE + + R Sbjct: 799 MQQNLDNVNNILNEERQLNSQLQEEIAKLNGANSQLESQFIEESIKCKQLNEREVHYKQE 858 Query: 361 --FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 L I Q +L+ + I + + +K K ++ + +Q + I + Sbjct: 859 IGNLQQQIAYKHQELLQLKDQITSLSDSSSEFKEEAQK-KFEYMNQVIKQKQQEIEDMQN 917 Query: 419 HIKKLITR---IEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 + L + + K++S + + L S + LK Sbjct: 918 QLDDLEKQIQDLNHQSEQKLESQKIQYNQQIQELNSLNQQYILK 961 >gi|238752747|ref|ZP_04614216.1| Exonuclease SbcC [Yersinia rohdei ATCC 43380] gi|238709005|gb|EEQ01254.1| Exonuclease SbcC [Yersinia rohdei ATCC 43380] Length = 1179 Score = 41.7 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 60/182 (32%), Gaps = 8/182 (4%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 L + + LI + + L L L R +L+ ++L+ + + Sbjct: 298 HEQETLIEQKVVPLDNLIAQQQHLLAQLATQLQQLRGKEQQGRQQLELNLQQLQQTHQRL 357 Query: 343 IFRKYR-HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 H + + + + Q + H+ ++Q + Q + E +++ Sbjct: 358 QQLAEYAHLHTHHQHWEKNLPLWREQFRQIHMQQQQSAESKQQLQQQITLLNELQQQTTT 417 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI------LQSFAY 454 L+ +Q + + H+ + ++ + + + +++ + L + + Sbjct: 418 LNEQDKQQQTALAQAHSQTSSIQQQLSRLEQLQPLAQLRQQLTVLQQQRPMRQQLAALSP 477 Query: 455 KN 456 Sbjct: 478 LA 479 >gi|58268954|ref|XP_571633.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|57227868|gb|AAW44326.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 2094 Score = 41.7 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 21/197 (10%), Positives = 53/197 (26%), Gaps = 17/197 (8%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRLPREL 335 + L+ + + + + D + Sbjct: 1809 YHQQLRTRNAGTVEFHALVNLVEQQSVIPFSQISQVQRLIDELYPTVTKQRDSDAMAERK 1868 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 +L + R + IK+ + R L+ +Q Q + + Sbjct: 1869 LADLRSKMSRMDMKIGQVEKLIKARRDSSFSEAARLMDLDPEQAAYQAKLRKATQDAEGQ 1928 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK---IKSCHTSVSITTRILQSF 452 E++ L ++ R + + + RI+ + + I+ ++ +R + S Sbjct: 1929 IEQLENLLAGLKRRAERQEHRQNPSQPPLERIQRSVRNIDAAIRERQQTIDELSRRIASL 1988 Query: 453 ---AYKNTL-----KRG 461 + L RG Sbjct: 1989 RVSTPREILLSQSVARG 2005 >gi|134112630|ref|XP_774858.1| hypothetical protein CNBF0230 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257506|gb|EAL20211.1| hypothetical protein CNBF0230 [Cryptococcus neoformans var. neoformans B-3501A] Length = 2094 Score = 41.7 bits (96), Expect = 0.32, Method: Composition-based stats. Identities = 21/197 (10%), Positives = 53/197 (26%), Gaps = 17/197 (8%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRLPREL 335 + L+ + + + + D + Sbjct: 1809 YHQQLRTRNAGTVEFHALVNLVEQQSVIPFSQISQVQRLIDELYPTVTKQRDSDAMAERK 1868 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 +L + R + IK+ + R L+ +Q Q + + Sbjct: 1869 LADLRSKMSRMDMKIGQVEKLIKARRDSSFSEAARLMDLDPEQAAYQAKLRKATQDAEGQ 1928 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK---IKSCHTSVSITTRILQSF 452 E++ L ++ R + + + RI+ + + I+ ++ +R + S Sbjct: 1929 IEQLENLLAGLKRRAERQEHRQNPSQPPLERIQRSVRNIDAAIRERQQTIDELSRRIASL 1988 Query: 453 ---AYKNTL-----KRG 461 + L RG Sbjct: 1989 RVSTPREILLSQSVARG 2005 >gi|332523900|ref|ZP_08400152.1| DNA polymerase III, alpha subunit [Streptococcus porcinus str. Jelinkova 176] gi|332315164|gb|EGJ28149.1| DNA polymerase III, alpha subunit [Streptococcus porcinus str. Jelinkova 176] Length = 1036 Score = 41.7 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 44/95 (46%), Gaps = 5/95 (5%) Query: 19 ELSYHLKHIVESNLSHVCVRGEISGYRGIHSSG--HAYFSLKDNHSRIDAIIWKGTLNKI 76 E + +K +++ + V V+ E SSG A+ ++ D +ID ++ + Sbjct: 876 EFTPIIK-LLKDSDQTVLVQIEKVRIIRTKSSGQQMAFLTVTDTKKKIDVTVFPQEFLQF 934 Query: 77 EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 + L EG + G++ ++ QI+++++ + Sbjct: 935 KHLLTEGQMVFIQGRVK--ERDNRLQIVVQTITLA 967 >gi|124244085|ref|NP_001013793.2| hypothetical protein LOC381260 [Mus musculus] Length = 1059 Score = 41.7 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 17/175 (9%), Positives = 47/175 (26%), Gaps = 4/175 (2%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIII-RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 E + E + I + + + + + ++ Sbjct: 837 ERSHEDPSKALQDKKQQEKASRDRIRIEKAEMRWLKVEQRRREQEELTWLHKEQLEKAEK 896 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + ELE + + +K R + ++ Q ++ R Sbjct: 897 MKEELELEQQRRTEEN--RLRKQRLEEERQQQEEAEKKRRLQLQAARERARQQQEELRRK 954 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-EFILSHKIKSCHTSVSI 444 + +++K E K R L + + R+ E +++ ++ Sbjct: 955 LQEIQRKKQQEAAERAEAEKQRQKELEMQLAEEQKRLMEMAEEERLEYQQQKLAA 1009 >gi|73669808|ref|YP_305823.1| hypothetical protein Mbar_A2319 [Methanosarcina barkeri str. Fusaro] gi|72396970|gb|AAZ71243.1| tRNA(Ile2) 2-agmatinylcytidine synthetase [Methanosarcina barkeri str. Fusaro] Length = 428 Score = 41.7 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 9/93 (9%) Query: 30 SNLSHVCVRGEISGYRGIHSSGHAYFSLKD-NHSRIDAIIWK--GTLNKIEFLPEEGIEF 86 ++ + G +S GH F ++D + ID ++ + G Sbjct: 267 RDMHSYTLEGTVSAIPKTLHGGHVIFPIQDKEENEIDCAAFEPTKNFRLLIRRLRPGDRI 326 Query: 87 LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 +V G + + IE + L Sbjct: 327 VVSGSVN------SRTLNIEKIEIKNLVPLYRE 353 >gi|307111694|gb|EFN59928.1| hypothetical protein CHLNCDRAFT_56456 [Chlorella variabilis] Length = 2869 Score = 41.7 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 45/162 (27%), Gaps = 2/162 (1%) Query: 292 LNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFN 351 R L L +L +Q + ++ L L + Sbjct: 1638 WQLDQARSSGAHQADLEEQLASLRRLEQHALQEKQQMADQAARLSSELNLARSEAAHRTA 1697 Query: 352 HIINRIKS-DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + ++ S Q RQ + ++ + ++Q + + LH+LR+ + Sbjct: 1698 ELEAQLASLQHSEQQAQHERQQLADQAARLAAELEQARSDAGQRMADLESQLHLLRQS-E 1756 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R+ L S ++ L S Sbjct: 1757 QAAQHERQQAADYAGRLSAELEQARDSAGQQIADLEGQLHSL 1798 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 10/163 (6%), Positives = 40/163 (24%), Gaps = 1/163 (0%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + + ++ L ++ + +LE L+ Sbjct: 1591 QAQLAALRQSERHAQQERQQQADEASRLAAELQQAQAAAAQRAADLEWQLDQARSSGAHQ 1650 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + L + + +Q + ++ + + R + ++ + + Sbjct: 1651 ADLEEQLASLRRLEQHALQEKQQMADQAARLSSEL-NLARSEAAHRTAELEAQLASLQHS 1709 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + R+ L ++ L Sbjct: 1710 EQQAQHERQQLADQAARLAAELEQARSDAGQRMADLESQLHLL 1752 >gi|153874825|ref|ZP_02002894.1| conserved hypothetical protein [Beggiatoa sp. PS] gi|152068712|gb|EDN67107.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 381 Score = 41.7 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 52/163 (31%), Gaps = 11/163 (6%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + + + RL++ E R + + + Sbjct: 9 RQKWVKNQQQWKKHDQQIAGLTSAIKKLEQRLEQKIEEDRQKWAENQKRFEKLEQRLEQK 68 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQI------VKQHLRYIFLEKKEKIAILHMLREQTK 410 I+ D +N+Q + + Q I ++ ++Q L E ++K E+ Sbjct: 69 IEED--RQKWAENQQQLEKHGQQIARLTSAIEKLEQRLDQKIEEDRQKWMENQQQLEKHG 126 Query: 411 NRIFYLHTHIKKLITRIEFIL---SHKIKSCHTSVSITTRILQ 450 +I L + I+KL R+E + K + + L Sbjct: 127 QQIARLTSAIEKLEQRLEQKIEEDRQKWMENQKRLENLEQRLD 169 >gi|119610511|gb|EAW90105.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_b [Homo sapiens] Length = 806 Score = 41.7 bits (96), Expect = 0.33, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 223 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 282 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 283 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 342 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 343 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 391 >gi|302535600|ref|ZP_07287942.1| single-stranded DNA-binding protein 1 [Streptomyces sp. C] gi|302444495|gb|EFL16311.1| single-stranded DNA-binding protein 1 [Streptomyces sp. C] Length = 195 Score = 41.7 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109 KD S + +W+ + + G+ +V G++ ++ + Y++ +E + Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLRQRSYEDREGVKRTVYELDVEEVG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|207722386|ref|YP_002252822.1| hypothetical protein RSMK04992 [Ralstonia solanacearum MolK2] gi|206587565|emb|CAQ18147.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 698 Score = 41.7 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 62/281 (22%), Gaps = 42/281 (14%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D + + L + + L Sbjct: 340 LDAHRQSNEALAEHWRTSLDRLTDTFDHRSAGLLEGVAVRLDTTASRISQAWTEALSQQD 399 Query: 316 NSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYRHFNHIINRIKS 359 ++ L+ R L + + R + + + S Sbjct: 400 QANAQLTGQHQRALEAATATFEQHAATLQRTLHQSHADLQAGLASRDEQRLAAWTDTLGS 459 Query: 360 DF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 L + QQ + + + IA L L + Sbjct: 460 MATTLSQQWDQAGARTASHQQAICETLARTAHDISARTQAHASDTIAELSRLVQAASEAP 519 Query: 414 FYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 + +L ++ + ++ ++ +L + + +T +R + Sbjct: 520 KAAAEVVAELRQKLSDSMVRDTEMLEERGRLLATVQTLLDAVNHASTEQR-----TAVDG 574 Query: 471 NFITQKRNLATKTRILINFFD---------GQANAIVINKA 502 T L R+ F D G A A V A Sbjct: 575 LISTSADLL---DRVGTRFADQVQAEGERLGTAAAQVTGSA 612 >gi|149177992|ref|ZP_01856589.1| hypothetical protein PM8797T_32275 [Planctomyces maris DSM 8797] gi|148843185|gb|EDL57551.1| hypothetical protein PM8797T_32275 [Planctomyces maris DSM 8797] Length = 1249 Score = 41.7 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 15/205 (7%), Positives = 54/205 (26%), Gaps = 16/205 (7%) Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 A + ++ ++E Q E + + + L + Sbjct: 684 AQPDRESLQILNRLRELAQRQKDLNEQLKALADKQRFAKTDQEREEIERQLKRLRERQRE 743 Query: 324 S-------RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ---KNRQHI 373 R+D+ + + + H +K + + + +Q + Sbjct: 744 LLRKADEVAQRMDQSKQPSSTKSRRELEQTRNHLQQSSESLKEGQISRALNSGTRAQQQL 803 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH------THIKKLITRI 427 + + + K++ L ++Q N++ + Sbjct: 804 DQLKNDFRKKTANQFADTMRGLKQQAEQLDEKQKQISNQLDKQQQQAQTQERKSLRKNQG 863 Query: 428 EFILSHKIKSCHTSVSITTRILQSF 452 + L+++++ + ++ Sbjct: 864 QQELANQLQEQEDRLKNLMEQMKQV 888 >gi|62914024|gb|AAH14055.3| CNTROB protein [Homo sapiens] Length = 805 Score = 41.7 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 222 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 281 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 282 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 341 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 342 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 390 >gi|51172578|dbj|BAD36753.1| single stranded-DNA binding protein [Onion yellows phytoplasma] gi|327202153|gb|AEA36724.1| single-stranded DNA binding protein [Periwinkle leaf yellowing phytoplasma] Length = 104 Score = 41.7 bits (96), Expect = 0.34, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEIS + ++KD + I +I++ + + +G + V G ++ Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRTQADNMFMYLHKGSKVYVEGSLSV 75 >gi|289596603|ref|YP_003483299.1| domain of unknown function DUF1743 [Aciduliprofundum boonei T469] gi|289534390|gb|ADD08737.1| domain of unknown function DUF1743 [Aciduliprofundum boonei T469] Length = 446 Score = 41.7 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 16/94 (17%) Query: 22 YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75 +K + +V +RG++ GHA F ++D+ +ID ++ T+NK Sbjct: 278 RRIKKV--KEYQNVILRGKVVKEARKIEGGHAIFQIEDSTGKIDCAAYEPTKNFRNTINK 335 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 ++ G E V G + I IE + Sbjct: 336 LKV----GDEVEVYGSVRD-EPR---TINIEKIR 361 >gi|254167847|ref|ZP_04874696.1| conserved domain protein [Aciduliprofundum boonei T469] gi|197623138|gb|EDY35704.1| conserved domain protein [Aciduliprofundum boonei T469] Length = 439 Score = 41.7 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 16/94 (17%) Query: 22 YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75 +K + +V +RG++ GHA F ++D+ +ID ++ T+NK Sbjct: 271 RRIKKV--KEYQNVILRGKVVKEARKIEGGHAIFQIEDSTGKIDCAAYEPTKNFRNTINK 328 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 ++ G E V G + I IE + Sbjct: 329 LKV----GDEVEVYGSVRD-EPR---TINIEKIR 354 >gi|145527772|ref|XP_001449686.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417274|emb|CAK82289.1| unnamed protein product [Paramecium tetraurelia] Length = 1178 Score = 41.7 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 17/176 (9%), Positives = 58/176 (32%), Gaps = 6/176 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL--SCSRYRLDRLPR 333 +E LQ+ + ++ + + + K + + ++ L + + + Sbjct: 814 QEEEALQNLEYQIFSKFQHQMEQRSKQENQRKIQSQLEFRSKEKELLDQIKQEQWKMDSQ 873 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + + +E + + + + N + + + + + N+ K +E+ K + Sbjct: 874 QQQIKVEQLKQLRMQQIQELENEAQLEEVEYQERINQFQQDLKMIQLEREKKLRDQLF-- 931 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 +E+I+ + K + + E + K + + + L Sbjct: 932 --QEQISKEELQLRDKKQVEDKKRQSSVQRRQQFEQEMERIAKQHQEKLRMQEQQL 985 >gi|328772567|gb|EGF82605.1| hypothetical protein BATDEDRAFT_86542 [Batrachochytrium dendrobatidis JAM81] Length = 858 Score = 41.7 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 17/166 (10%), Positives = 50/166 (30%), Gaps = 6/166 (3%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 Q E + + L + + R L + + Sbjct: 454 QDEKRRQEELERLEKRLQEEKQRQDERRLQDEKRRQQELEELQKQRQRELKELEKQRQQE 513 Query: 342 IIFRKYRHFNHIINRIKSDFL---IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + + + + +K Q +QQ +E++ KQ + + +K++ Sbjct: 514 LEELEKQRQEEKRLQDEKRRQDEKRRQEEKRLQDEKRRQQELEELEKQRQQELEKLEKQR 573 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK---SCHTS 441 L L +Q + + L ++ + +++ +++ Sbjct: 574 QQELEKLEKQRQQELEKLEKQRQQELEKLQKQRQQELEELERKRQQ 619 >gi|83765304|dbj|BAE55447.1| unnamed protein product [Aspergillus oryzae] Length = 405 Score = 41.7 bits (96), Expect = 0.35, Method: Composition-based stats. Identities = 29/275 (10%), Positives = 81/275 (29%), Gaps = 14/275 (5%) Query: 136 QHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL 195 N + PTG ++ + + R +V + PV + D E Sbjct: 133 NRTNIVDNRIHACVYFIQPTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAQFK 192 Query: 196 QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHETD 252 Q + I R E+ N E++ A+ ++ + +A G + Sbjct: 193 Q--RILADIQHHSIQIFEGPRYELDDEETIAENQEIMSKVPFAVVGANAEVATADGRKVR 250 Query: 253 -------WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 D + ++ E ++ + ++ + Sbjct: 251 GRSYPWGTIEVDNEEHCDFVKLRQMLIRTHMEELKEHTNNHLYENYRSDKLTQMGVAQDP 310 Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LI 363 ++ + ++ + +L ++ E++ + + K + + + + Sbjct: 311 SVFKEVNPAVKQEEERALHEQKLAKMEAEMKMVFQQKVAEKESKLKQSEDELYARHREMK 370 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 +++ RQ + EK+ +E + + Sbjct: 371 DQLERQRQELDEKKSRLESGRPIEEKGKRKGFSLR 405 >gi|156034591|ref|XP_001585714.1| hypothetical protein SS1G_13230 [Sclerotinia sclerotiorum 1980] gi|154698634|gb|EDN98372.1| hypothetical protein SS1G_13230 [Sclerotinia sclerotiorum 1980 UF-70] Length = 587 Score = 41.3 bits (95), Expect = 0.36, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 83/300 (27%), Gaps = 23/300 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + E + + E F N + Sbjct: 273 LRLTVVDTPGFGDFVNNDESWRPIVDNIEQRFDAYLDAENKVNRVNIVDNRVHACVYFIQ 332 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E A + I Sbjct: 333 PTGHALKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEITAFKF--RILADIKHHDIQIFE 390 Query: 214 LARGGGSIEDLWHFNDEMI-----VRAIANSSIPIISA---IGHETDWTLA--DYAADLR 263 E+ N E++ ANS I G + W + D Sbjct: 391 GPHYEKDDEETIAENKEIMDKVPFAVVGANSEITNNEGRKVRGRKYPWGVIEVDNEEHCD 450 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E + + + + + + ++ Sbjct: 451 FVKLRQMLIRTHMEELKEHTNNALYENYRSEKLTAMGVTQDPNVFKEVNPAVKQEEERQL 510 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + +++ RQ + EK+ +E Sbjct: 511 HEQKLAKMEAEMKMVFQQKVAEKESKLKQSEEELYARHREMKEQLERQRQELEEKKSRVE 570 >gi|294630309|ref|ZP_06708869.1| single-strand binding protein [Streptomyces sp. e14] gi|292833642|gb|EFF91991.1| single-strand binding protein [Streptomyces sp. e14] Length = 194 Score = 41.3 bits (95), Expect = 0.36, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109 KD S + +W+ + + G+ +V G++ ++ + Y++ +E + Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|42558981|sp|Q8BSS9|LIPA2_MOUSE RecName: Full=Liprin-alpha-2; AltName: Full=Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2; Short=PTPRF-interacting protein alpha-2 Length = 1257 Score = 41.3 bits (95), Expect = 0.36, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + V +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|312869939|ref|ZP_07730078.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3] gi|311094524|gb|EFQ52829.1| chromosome segregation protein SMC [Lactobacillus oris PB013-T2-3] Length = 1188 Score = 41.3 bits (95), Expect = 0.37, Method: Composition-based stats. Identities = 17/173 (9%), Positives = 48/173 (27%), Gaps = 4/173 (2%) Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 + ++R + + L L L +S Q + R + ELE Sbjct: 214 DYLEQKEQFDRLDQTQLVRNYDQQHDQLQRLQGKLADSRQLVDQYRKKTAAADTELEKYK 273 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + + I + +N+Q I ++ ++ + L +++ Sbjct: 274 QQRTALQRDK-DAANQSILRQTQLIADYQNQQSISTVKRQQQEQEQHRLSEQISANQQEQ 332 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + K + + + +++ + L+ Sbjct: 333 EQVQKRLAAVKQDLTAHEQTMAEHKKQLQAAEQQT---ASERLQQLQARLEEL 382 >gi|254416888|ref|ZP_05030636.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC 7420] gi|196176252|gb|EDX71268.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC 7420] Length = 1274 Score = 41.3 bits (95), Expect = 0.37, Method: Composition-based stats. Identities = 15/188 (7%), Positives = 48/188 (25%), Gaps = 3/188 (1%) Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 R + +S + I L + + + L K Sbjct: 741 RESATAKQLTQTLTDARETRSQTQLRLEQSRKDIQGLTEQQTQVRSLLAKNTQEVQTAAE 800 Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 + L + + + + + I+ + +++Q + + Sbjct: 801 RLQQLNQDL--PAQERQLQALREQLAQLEAEQTPQEWQQIQSQIKTQEAVLGDREQALRE 858 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH-THIKKLITRIEFILSHKIKSCHTS 441 KQ ++ + + + + + + I R + +I+ Sbjct: 859 AEKQLQALENQHQRTNEQLATSYQRIAEYQTQHQSIQEQQAEINRQLEAIEVQIEQTQAR 918 Query: 442 VSITTRIL 449 ++ + L Sbjct: 919 LTQLEQRL 926 >gi|60360140|dbj|BAD90289.1| mKIAA4112 protein [Mus musculus] Length = 1261 Score = 41.3 bits (95), Expect = 0.37, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 168 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 225 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + V +G + + ++ + D +++L + Sbjct: 226 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 285 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + S +G E + D T ++ I Sbjct: 286 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 344 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 345 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 404 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 405 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 447 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 448 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 501 >gi|330504719|ref|YP_004381588.1| SMC domain-containing protein [Pseudomonas mendocina NK-01] gi|328919005|gb|AEB59836.1| SMC domain-containing protein [Pseudomonas mendocina NK-01] Length = 1144 Score = 41.3 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 23/205 (11%), Positives = 59/205 (28%), Gaps = 3/205 (1%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E + + D A P A + + S L + + ++ L S Sbjct: 528 EQEQRIQDLEAYRAQLQPGEACPLCGSHEHPAVSQYQALNVSATRQALEECRGELAQLES 587 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK- 368 AL + L+ +L + + + + +H +I + +Q+ Sbjct: 588 QGAALRDELTRLATQIVQLQQQLEQAQLQSTQQSAQWQQHLAEQNWQIADGNALRQLQRE 647 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + Q + + Q + + + + ++A Q + + R + Sbjct: 648 HEQSLAQLQDRLAAVETRQTQLAQARNVREVAERAQADMQQRQALLARDEDNLLARQREQ 707 Query: 429 FILSHKIKSCHTSVSITTRILQSFA 453 +++ +L S Sbjct: 708 REHLQRLEHELQRHEQ--ALLASLD 730 >gi|118377124|ref|XP_001021744.1| hypothetical protein TTHERM_00152120 [Tetrahymena thermophila] gi|89303510|gb|EAS01498.1| hypothetical protein TTHERM_00152120 [Tetrahymena thermophila SB210] Length = 505 Score = 41.3 bits (95), Expect = 0.38, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 54/181 (29%), Gaps = 1/181 (0%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + + + + + L + + N + ++ L + Q + + Sbjct: 158 NIPSYFENQEDNQMQENISELYVDSVICRMIEKNCYDLSIQDLYSDIQKIKEDNSKEMFF 217 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 + LE +I + H N K+ + +Q L QQ Q + Q + Sbjct: 218 QEKRIFQLESLIQIEQMHHRTYENEKKNLITKIAEMEIKQENLLSQQKQYQELIQKFKQE 277 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 +EK+ Q K + +K + +++ + + L+ Sbjct: 278 MGRLQEKLEFREYELNQLKEKKNVYQAKLKDCQD-LNQEFKQRLEYKEKQLDDKDKQLED 336 Query: 452 F 452 Sbjct: 337 L 337 >gi|329112534|ref|NP_001192270.1| liprin-alpha-2 isoform 1 [Mus musculus] gi|190148193|gb|ACE63188.1| liprin-alpha 2 [Mus musculus] Length = 1257 Score = 41.3 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + V +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|40789298|ref|NP_796347.2| liprin-alpha-2 isoform 2 [Mus musculus] gi|40674816|gb|AAH65133.1| Protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Mus musculus] gi|148689738|gb|EDL21685.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2, isoform CRA_a [Mus musculus] Length = 1256 Score = 41.3 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + V +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERL-TALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|301065253|ref|YP_003787276.1| hypothetical protein LCAZH_0128 [Lactobacillus casei str. Zhang] gi|300437660|gb|ADK17426.1| Protein of unknown function DUF214 [Lactobacillus casei str. Zhang] Length = 1185 Score = 41.3 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 24/278 (8%), Positives = 88/278 (31%), Gaps = 13/278 (4%) Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI-AN 238 ++ + + + +L+ + K P+II G S +V + + Sbjct: 144 TIKFVQRADQTGSKVLKRTSFKVVGFVYSPEIISSINKGNSTSGSGDLKGYGVVTSNNFD 203 Query: 239 SSIPIISAIGH---ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 S + +++ + + + + D T + + +++ + Sbjct: 204 SDVYMMARLTYRNTKGLDPYSSQYTDRIQAHKTALNHLLQNAPQARLAAIKKQYQAKIDA 263 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + LN+ + L Q L+ ++ ++ +EL+ ++ + + Sbjct: 264 GQKKLDDAKAQLNAAQEQLTTGAQQLATAKQQVAAKQQELDAGVKNGQAQIASGETQLQQ 323 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + ++RQ ++ +Q + Q + K+++ + ++ ++ Sbjct: 324 A------STQLSQSRQQLITAKQQLVAGQQQLDDKHQALVAAKQQLDAAKQQLDNSQQQL 377 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + ++ + L + Sbjct: 378 ATAKQQLTTGQQ-QLNAKQQDLTTAKQQLNAAKQQLDA 414 >gi|218440494|ref|YP_002378823.1| hypothetical protein PCC7424_3565 [Cyanothece sp. PCC 7424] gi|218173222|gb|ACK71955.1| protein of unknown function DUF323 [Cyanothece sp. PCC 7424] Length = 925 Score = 41.3 bits (95), Expect = 0.39, Method: Composition-based stats. Identities = 23/188 (12%), Positives = 55/188 (29%), Gaps = 6/188 (3%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR--LPRELE 336 E + + R + + + + + R R + + Sbjct: 408 ERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEIQKQRQA 467 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL----RYIF 392 + R + + D + RQ L++Q+ E+I KQ R Sbjct: 468 EAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAK 527 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 LE++ + E + R ++ + + L + + + Q+ Sbjct: 528 LERQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQKRFNSERQQTT 587 Query: 453 AYKNTLKR 460 + +T+ R Sbjct: 588 SQSSTISR 595 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 21/165 (12%), Positives = 43/165 (26%), Gaps = 5/165 (3%) Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLN---SLLKALPNSDQTLSCSRYRLDRLPRELE 336 Q ++ + R K + L + R R E Sbjct: 385 EKQHQEEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREE 444 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + R I + +++ + RQ E+ Q ++ +Q R +++ Sbjct: 445 EAQRQAELDRQRREEEIQKQRQAEA-KRQAKLERQRREEEAQRQAELDRQR-REEEAQRQ 502 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 ++ E K R K R E + + Sbjct: 503 AELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQR 547 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 59/195 (30%), Gaps = 5/195 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D+ + A + V ++E +Q + + + ++ + + Sbjct: 339 DIESIETEILAPIKVRLEEEVQRQKQAELEKQRREEEQQRQKQVELEKQHQEEEIQKQRQ 398 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 R R E + R + + D + RQ L++Q+ Sbjct: 399 AEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEAQRQAELDRQRRE 458 Query: 381 EQIVKQHL----RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEFILSHKI 435 E+I KQ R LE++ + E + R +L R E + + Sbjct: 459 EEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAELDRQRREEEIQKQR 518 Query: 436 KSCHTSVSITTRILQ 450 ++ + R + Sbjct: 519 QAEAKRQAKLERQRR 533 >gi|328883730|emb|CCA56969.1| Single-stranded DNA-binding protein [Streptomyces venezuelae ATCC 10712] Length = 196 Score = 41.3 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109 KD S + +W+ + + G+ +V G++ ++ + Y++ +E + Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVVVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|254391457|ref|ZP_05006659.1| single-stranded DNA-binding domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294813712|ref|ZP_06772355.1| Single-stranded DNA-binding protein 1 [Streptomyces clavuligerus ATCC 27064] gi|326442134|ref|ZP_08216868.1| single-stranded DNA-binding protein [Streptomyces clavuligerus ATCC 27064] gi|197705146|gb|EDY50958.1| single-stranded DNA-binding domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294326311|gb|EFG07954.1| Single-stranded DNA-binding protein 1 [Streptomyces clavuligerus ATCC 27064] Length = 197 Score = 41.3 bits (95), Expect = 0.40, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109 KD S + +W+ + + G+ +V G++ ++ + Y++ +E + Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVVVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|242218009|ref|XP_002474799.1| predicted protein [Postia placenta Mad-698-R] gi|220726047|gb|EED80010.1| predicted protein [Postia placenta Mad-698-R] Length = 1244 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 23/214 (10%), Positives = 66/214 (30%), Gaps = 15/214 (7%) Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + + + HE ++ D D R + + S L+ R + Sbjct: 1041 ARVVCLDCDTHEKSFSTIDLCEDQRCMAAQVGLDRRSDLPTPHLPSHNVLKTRTMIHLRD 1100 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K + L +L +A +S + + I + I+ Sbjct: 1101 FGKVERQALAALQRATASSAEVEEQKHELITHRLAGDRGQTRNINSGEQVCTACKGALIR 1160 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + + I+ +Q +++ ++ + I ++ + M ++ Sbjct: 1161 PCW--YCIECEKQATDKEESLEHRLDFWESKLIVMDSRIDEQGSEM------------NS 1206 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + +L R+ + +++ + R+L++ Sbjct: 1207 RLVQLEMRLSK-VDNRLAQVDERLVHMERLLEAV 1239 >gi|328713962|ref|XP_001943041.2| PREDICTED: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like isoform 1 [Acyrthosiphon pisum] Length = 5583 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 +D P+ + ++ + R ++ L K ++ + + Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 +RL + + I + + + + ++ + E + Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435 I + ++ R L+ K L +++ I L ++ L R L ++ Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473 Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459 + H +L S TL Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499 >gi|328954373|ref|YP_004371707.1| metal dependent phosphohydrolase [Desulfobacca acetoxidans DSM 11109] gi|328454697|gb|AEB10526.1| metal dependent phosphohydrolase [Desulfobacca acetoxidans DSM 11109] Length = 337 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 57 LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL 108 L D I +W + + G V+G++ ++ + + Q+ I+ + Sbjct: 40 LADKSGAIPCKVWSNVRQEFPGSFQTGDYVGVVGRVESY--NGELQLNIKKI 89 >gi|297699961|ref|XP_002827035.1| PREDICTED: centrobin-like isoform 1 [Pongo abelii] Length = 925 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 49/169 (28%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + + S + L L R + +L+ + + + Sbjct: 321 EAEQQRCCALQEERDTARAGQLSEHQELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQATWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|294496570|ref|YP_003543063.1| phosphoesterase RecJ domain protein [Methanohalophilus mahii DSM 5219] gi|292667569|gb|ADE37418.1| phosphoesterase RecJ domain protein [Methanohalophilus mahii DSM 5219] Length = 710 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 13/92 (14%) Query: 18 SELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIE 77 SEL ++ + V + GE+ + + G F + D I ++ + Sbjct: 201 SELKDYVGKL-------VRIEGEVLQVKQ--TGGPTIFVISDEGGIIPCAAFESAGERAY 251 Query: 78 FLPEEGIEFLVIGKITTFPGSS-KYQIIIESL 108 + + + G++ Q+ ++S+ Sbjct: 252 PDIDSDMVVSLTGEVNL---RGEDLQLEVKSM 280 >gi|169546403|ref|YP_001708789.1| single-stranded DNA binding protein [Paulownia witches'-broom phytoplasma] gi|148724156|gb|ABR08381.1| single-stranded DNA binding protein [Paulownia witches'-broom phytoplasma] Length = 104 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 39 GEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEIS + ++KD + I +I++ + + +G + V G ++ Sbjct: 25 GEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLRKGSKVYVEGSLSI 75 >gi|86610360|ref|YP_479122.1| chromosome segregation protein SMC [Synechococcus sp. JA-2-3B'a(2-13)] gi|86558902|gb|ABD03859.1| putative chromosome segregation protein SMC [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1188 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 58/190 (30%), Gaps = 12/190 (6%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A +E + + L + + ++ L + +L+ + ++ + Sbjct: 717 AAQAREKQLAQALLLARQDALQAQQYLERHQADCQKQQARLQHLQGSLAQRQSESHQIQQ 776 Query: 334 ELEHN------LEIIIFRKYRHFNHIIN---RIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 L+ L+ + + + L +Q+ + E QQ + Q+ Sbjct: 777 RLQQIQLRWDPLQQRLADLTLKLSQLEGSPVNQHWQQLQQTVQQQESRLAELQQQLTQLE 836 Query: 385 KQHLRY--IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 +Q K+ +I +++K R YL I + + + + + Sbjct: 837 RQQQENSGQQHLKQAQIQHHQERLQESKQRQAYLQEQIVQAQATLGQ-IQQHLAEQRQQM 895 Query: 443 SITTRILQSF 452 S L Sbjct: 896 SQIEARLSHL 905 Score = 40.1 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 21/218 (9%), Positives = 67/218 (30%), Gaps = 4/218 (1%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS--CSRYRL 328 + + +EARL+++ + + + + + + Sbjct: 881 LGQIQQHLAEQRQQMSQIEARLSHLRQERDRQEFQLRAQQQQIQRLEWERYNALTQQQEK 940 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQ 386 + L +L+ L+ + ++ + D L +K + + + + + Sbjct: 941 EALLAQLQTQLQAVAQELPDPLPNLPATLTLDELQRQKRKIEEQLRSLEPVNMLAIAEYE 1000 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + + K+ LH R + RI T ++ ++ ++ +S Sbjct: 1001 QTQARLRDLSAKLETLHQERTELLLRIENFSTLRRQAFLDAFHAVNGHFQTIFAQLSDGD 1060 Query: 447 RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 L+ ++ G T + + + ++ + Sbjct: 1061 GHLELENPEDPFAGGLTLVAHPKGKPVRRLSAMSGGEK 1098 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 49/162 (30%), Gaps = 11/162 (6%) Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 + ++ I + ++ + L + L + LS + Sbjct: 758 QHLQGSLAQRQSESHQIQQRLQQIQLRWDPLQQRLADLTLKLSQLEGSPVNQHWQQLQQT 817 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + ++ + +Q QQH++Q QH + E K++ Sbjct: 818 VQQQESRLAELQQQLTQL----------ERQQQENSGQQHLKQAQIQHHQERLQESKQRQ 867 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 A L Q + + + H+ + ++ + ++ Sbjct: 868 AYLQEQIVQAQATLGQIQQHLAEQRQQMSQ-IEARLSHLRQE 908 >gi|156538593|ref|XP_001607521.1| PREDICTED: similar to CG11199-PA [Nasonia vitripennis] Length = 1187 Score = 41.3 bits (95), Expect = 0.41, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 56/188 (29%), Gaps = 11/188 (5%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 Q + + L+ L + + + ++L + +S Sbjct: 280 LSKTQKDFLKAQDANVKLQRDLRENLAQKEDQEQRIATLEKRSLNAQREAISLH-----D 334 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 L +LE L+ + I L + + E ++ ++Q ++ + Sbjct: 335 LKEKLEQELQHKTAQLKFQEEKIAALQAKLELTEQELQQFAKLPEMEEQLKQRMEALTQA 394 Query: 391 IFLE--KKEKIAILHMLREQTKNRIFYLHTHIKK---LITRIEFILSHKIKSCHTSVS-I 444 +++I L E+ + L+ +K TR+ + + + + Sbjct: 395 QERHGSAEDRIQRLETQLEEKTAEVIRLNQRLKMNEEHNTRLSSTVDKLLSESNERLQVH 454 Query: 445 TTRILQSF 452 + + Sbjct: 455 LKERMHAL 462 >gi|327202141|gb|AEA36714.1| single-stranded DNA binding protein [Periwinkle leaf yellowing phytoplasma] Length = 104 Score = 41.3 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEIS + ++KD + I +I++ + + +G + V G ++ Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75 >gi|222446338|dbj|BAH20799.1| single stranded DNA binding protein [Onion yellows phytoplasma] gi|327202128|gb|AEA36703.1| single-stranded DNA binding protein [Periwinkle leaf yellowing phytoplasma] Length = 104 Score = 41.3 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEIS + ++KD + I +I++ + + +G + V G ++ Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75 >gi|152988436|ref|YP_001350185.1| nuclease sbcCD subunit C [Pseudomonas aeruginosa PA7] gi|150963594|gb|ABR85619.1| nuclease sbcCD subunit C [Pseudomonas aeruginosa PA7] Length = 1211 Score = 41.3 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 10/160 (6%), Positives = 41/160 (25%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 K L L + L + + ++ + L+ + ++ Sbjct: 213 DEQRKQLEQRLEGSLPLAEQARTELESTLANHTQARQQEQQALQRLENQQQWFLEERRLA 272 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + + + + R E + + +++ L ++ + Sbjct: 273 LSCEQAQRQLAEARHAWDGLAAERETLQQLERLAPVRGLLQRLEQLGQDLLLSQEQHRQQ 332 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 R+ + S ++ + + + ++ Sbjct: 333 SQRHTAGSERLLQLQSQLHEARQRQAAAESTLREAQGPLR 372 Score = 40.9 bits (94), Expect = 0.49, Method: Composition-based stats. Identities = 16/168 (9%), Positives = 54/168 (32%), Gaps = 7/168 (4%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII------ 342 + ++ + + ++ L TL + RL L+H Sbjct: 863 RHTRAQDWQQALENAVQAAQATVETLQAPLDTLREEQLRLGEALEHLQHQQSRQQEERQR 922 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + ++ + + L + + ++H++Q+ ++ R LE + + + Sbjct: 923 LQADWQAWREGQENLDDSRLDALLALPDAQARQWREHLQQLQEEITRQRTLEAERQEQLQ 982 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 R++ + L +++ R+ + + + + + Sbjct: 983 QHRRQRPELDHEALEDILRQQRERLAASEQAYLDAYSQ-LQADNQRRE 1029 >gi|18249854|ref|NP_543034.1| single-stranded DNA binding protein [Aster yellows phytoplasma] gi|18143627|dbj|BAB79698.1| single-stranded DNA binding protein [Aster yellows phytoplasma] Length = 104 Score = 41.3 bits (95), Expect = 0.42, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEIS + ++KD + I +I++ + + +G + V G ++ Sbjct: 24 EGEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75 >gi|261884175|ref|ZP_06008214.1| exodeoxyribonuclease VII large subunit [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 45 Score = 41.3 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 16 SVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHA 53 +VSEL+ K ++E++ V V GEIS HSSG Sbjct: 2 TVSELNEQAKALLETHKRIVEVTGEISRL-IRHSSGQW 38 >gi|169546409|ref|YP_001708794.1| single-stranded DNA binding protein [Paulownia witches'-broom phytoplasma] gi|148724162|gb|ABR08386.1| single-stranded DNA binding protein [Paulownia witches'-broom phytoplasma] Length = 104 Score = 41.3 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 39 GEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEIS + ++KD + I +I++ + + +G + V G ++ Sbjct: 25 GEISKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKVYVEGSLSV 75 >gi|156523116|ref|NP_001095972.1| serine/threonine-protein kinase MRCK gamma [Bos taurus] gi|151554127|gb|AAI49212.1| CDC42BPG protein [Bos taurus] Length = 1417 Score = 41.3 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 26/245 (10%), Positives = 68/245 (27%), Gaps = 29/245 (11%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK-YRHFNHIINRI 357 ++ + L+ + L + S+ RL+ RE E N E I + ++R Sbjct: 634 RLQEENRRLSQEQERLMEELEREQQSKQRLEGERRETESNWEAQIADILSWVNDEKVSRG 693 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 L + + + + ++ ++ A + + + Sbjct: 694 YLQALATKMAEELESLRNVGTQTLPSRPLDHQWKARRLQKMEASARLELQSA---LEAEI 750 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTL-----KRG---YTSIQDT 468 + L R+ ++ + + + Q+ TL RG Sbjct: 751 RAKQGLQERLTQAQEAQL-RAESRLQEAEKRHQALQQELATLREELRARGPPD----TKP 805 Query: 469 NNNFI---------TQKRNL-ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518 +N+ I ++ + + + +G+ + + P T Sbjct: 806 SNSLIPFLSFRGSEDSAKDAGTSGEALELR-PEGRRSLRLGAVFPRTPAATTPPAESPPA 864 Query: 519 REKQG 523 + Sbjct: 865 KPGSH 869 >gi|115636692|ref|XP_001190303.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115650720|ref|XP_790891.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1270 Score = 41.3 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 13/200 (6%), Positives = 56/200 (28%), Gaps = 2/200 (1%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 D+ P + K + + I + K Sbjct: 439 CDIHTPAEAEKKPIMKNDKVIEMDAAEKGWSAKKAKAISRKNMRKARKILAEKRAAMPVV 498 Query: 320 TL-SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 ++ + R+ ++ +++ + ++ + + + + + + + Sbjct: 499 SIPCIPQQRISKILKKVTLQKKQHFMQRLVSYWTLKRQSRHGVPLLRRLQAHHQSQRNKD 558 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-EFILSHKIKS 437 + + ++ R K + + R + + +K+ ++ + +++ Sbjct: 559 SVSRESQKANRLKEQLKYWQRLRHDLERARLLVELIRKREKLKREQMKLSQKATDMQLQP 618 Query: 438 CHTSVSITTRILQSFAYKNT 457 + + T L+ N Sbjct: 619 FNILLQRTLAKLEEMDPLNI 638 >gi|20093597|ref|NP_613444.1| RecJ-like exonuclease [Methanopyrus kandleri AV19] gi|19886456|gb|AAM01374.1| Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain [Methanopyrus kandleri AV19] Length = 752 Score = 41.3 bits (95), Expect = 0.43, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 F+L+D I ++G + E G VIG++TT + Q+ I + Sbjct: 255 FTLRDESGSIWMAAFEGPGIRAYPDIEAGDYVRVIGEVTTH--DGQLQVEILDME 307 >gi|242205782|ref|XP_002468748.1| predicted protein [Postia placenta Mad-698-R] gi|220732133|gb|EED85971.1| predicted protein [Postia placenta Mad-698-R] Length = 1237 Score = 41.3 bits (95), Expect = 0.44, Method: Composition-based stats. Identities = 22/214 (10%), Positives = 65/214 (30%), Gaps = 15/214 (7%) Query: 239 SSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIR 298 + + + HE ++ D D R + + S L+ R + Sbjct: 1034 ARVVCLDCDTHEKSFSTIDLCDDQRCMAAQVGLDRRSDLPTPHLPSHNVLKTRTMIHLRD 1093 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K + L +L +A + + + I + I+ Sbjct: 1094 FGKVERQALAALQRATASFAEVEEQKHELITHRLAGDRGQTRNINSGEQVCTACKGALIR 1153 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + + I+ +Q +++ ++ + I ++ + M ++ Sbjct: 1154 PCW--YCIECEKQATDKEESLEHRLDFWESKLIVMDSRIDEQGSEM------------NS 1199 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + +L R+ + +++ + R+L++ Sbjct: 1200 RLVQLEMRLSK-VDNRLAQVDERLVHMERLLEAV 1232 >gi|168756929|ref|ZP_02781936.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4401] gi|189355999|gb|EDU74418.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4401] Length = 1047 Score = 41.3 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 16/163 (9%), Positives = 43/163 (26%), Gaps = 16/163 (9%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHW-- 296 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML------------REQTKN 411 I ++R + +Q IE++ + + L + Q + Sbjct: 297 ERIAEHRAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHD 356 Query: 412 RIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 R + + + S + ++ ++ + L + Sbjct: 357 RFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|297699963|ref|XP_002827036.1| PREDICTED: centrobin-like isoform 2 [Pongo abelii] Length = 903 Score = 41.3 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 49/169 (28%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + + S + L L R + +L+ + + + Sbjct: 321 EAEQQRCCALQEERDTARAGQLSEHQELETLRAALEEERQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQATWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|254417320|ref|ZP_05031063.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes PCC 7420] gi|196175858|gb|EDX70879.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes PCC 7420] Length = 513 Score = 41.3 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 11/118 (9%), Positives = 41/118 (34%), Gaps = 3/118 (2%) Query: 338 NLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + +N ++ + L + + + + + +Q + + R L + Sbjct: 203 AQRQRLQASQNEYNSRVAAADLEVEQLNRQLTQTQIQLADAEQVLAFNQQITDRLEKLWR 262 Query: 396 KEKIAILHMLREQTKNRIFYLH-THIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + L LR++ +++ R+E + + +++++ L++ Sbjct: 263 EGAFGELQYLRQKQDTDSSAAEVARLRQEQERLEKAIQQAQERKQNTMALSEEELRTL 320 >gi|195351251|ref|XP_002042148.1| GM10377 [Drosophila sechellia] gi|194123972|gb|EDW46015.1| GM10377 [Drosophila sechellia] Length = 696 Score = 41.3 bits (95), Expect = 0.45, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 6/182 (3%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 +H ++ L+ ++ + TL + + + S R + Sbjct: 298 SGDHSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395 N + + + H ++K R + QH+EQ + R I + Sbjct: 358 RNERTRQRLQEMREQREAQQWELHSQRHRLEKERLELRTLAPQHLEQ--RDQKRQIERQV 415 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + +++ L + ++ N + + ++L + + Sbjct: 416 ERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472 Query: 456 NT 457 Sbjct: 473 AV 474 >gi|307329990|ref|ZP_07609142.1| single-strand binding protein [Streptomyces violaceusniger Tu 4113] gi|306884366|gb|EFN15400.1| single-strand binding protein [Streptomyces violaceusniger Tu 4113] Length = 201 Score = 41.3 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGIKRTVYELDVDEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|291411235|ref|XP_002721898.1| PREDICTED: A-kinase anchor protein 13 [Oryctolagus cuniculus] Length = 2737 Score = 41.3 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 21/204 (10%), Positives = 54/204 (26%), Gaps = 15/204 (7%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2392 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNATLVFTLKRNTEQVVQSIVHLHEL 2451 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ R + + +++K RQ + Q+ Sbjct: 2452 LSTLQGVVLQQDSYIEDQKLVLSERPLTRGASRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2511 Query: 381 EQ------IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR-------- 426 Q ++ E + + A L EQ + L + L R Sbjct: 2512 AQHAEERRRREREWEARERELQAREARLAEREEQVQRGQRDLEREREDLQQRKGAYQCDL 2571 Query: 427 -IEFILSHKIKSCHTSVSITTRIL 449 +++ + L Sbjct: 2572 EQLRAAQRQLEREQERLRRDAGRL 2595 >gi|302543992|ref|ZP_07296334.1| single-strand binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302461610|gb|EFL24703.1| single-strand binding protein [Streptomyces himastatinicus ATCC 53653] Length = 196 Score = 41.3 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGIKRTVYELDVDEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|328713964|ref|XP_003245225.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like isoform 5 [Acyrthosiphon pisum] Length = 5304 Score = 41.3 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 +D P+ + ++ + R ++ L K ++ + + Sbjct: 306 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 365 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 +RL + + I + + + + ++ + E + Sbjct: 366 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 422 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435 I + ++ R L+ K L +++ I L ++ L R L ++ Sbjct: 423 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 482 Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459 + H +L S TL Sbjct: 483 EKLHQRWVNLRSLLHSKVLTPLATLS 508 >gi|328713960|ref|XP_003245224.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like isoform 4 [Acyrthosiphon pisum] Length = 5312 Score = 41.3 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 +D P+ + ++ + R ++ L K ++ + + Sbjct: 306 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 365 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 +RL + + I + + + + ++ + E + Sbjct: 366 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 422 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435 I + ++ R L+ K L +++ I L ++ L R L ++ Sbjct: 423 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 482 Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459 + H +L S TL Sbjct: 483 EKLHQRWVNLRSLLHSKVLTPLATLS 508 >gi|291244243|ref|XP_002742009.1| PREDICTED: kinesin family member 3B-like [Saccoglossus kowalevskii] Length = 1333 Score = 41.3 bits (95), Expect = 0.46, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 4/145 (2%) Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHILEKQ 377 Q L + + LE + F + K L HNI+K RQ Q Sbjct: 817 QKLQSDYKKKVDAAKSKIKLLEKRQNDTEKIFKMQAHSEKKVSDLEHNIEKMRQQQELLQ 876 Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + + + ++ + ++ +++ L + EQ + + + ++ + + Sbjct: 877 RRLREEAERKTKLEREMQRDQQRMKELEIRNEQQQKILKRKTEEVAAAQRKLRQGSAQMV 936 Query: 436 KSCHTSVSITTRILQSFAYKNTLKR 460 + + L + + L+R Sbjct: 937 GEDQHKLDEQRKWLDN-EVERVLER 960 >gi|220908912|ref|YP_002484223.1| exonuclease SbcC [Cyanothece sp. PCC 7425] gi|219865523|gb|ACL45862.1| exonuclease SbcC [Cyanothece sp. PCC 7425] Length = 1003 Score = 40.9 bits (94), Expect = 0.47, Method: Composition-based stats. Identities = 15/181 (8%), Positives = 53/181 (29%), Gaps = 12/181 (6%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD-RLPRELEHNLEI 341 + I + + ++ L L L ++ ++ L+ Sbjct: 625 NHAIARGQVEYWRWAEVKQAELQQARKRQAQLAQQLPALEEQITILQTQIEQQQNSELQR 684 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR---------YIF 392 I + + ++ + + +Q + Q + + + + + Sbjct: 685 QIEHLEQTLASLDYNLEYHHELRQTLRQQQIWTLRHQELLRAQQNYPQVQQSVQTLHQSL 744 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 +++++ + ++ H H +++ +E L + +S LQ Sbjct: 745 QLRQQELGAIGEQMTNLTRQLAQTHDHSQRIRE-LETQLQADQQQREQKLSEL-GRLQQL 802 Query: 453 A 453 + Sbjct: 803 S 803 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 22/172 (12%), Positives = 61/172 (35%), Gaps = 3/172 (1%) Query: 281 LQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE 340 + + N+L L +Q L+ +E + + Sbjct: 247 WHRQQQQNLHTEVERLQQQYTTACQQANTLFNLLQQQEQILAGYTRWHQLQEQEESLSAK 306 Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 +++ + + +++ L ++ Q + ++ IEQ ++ + + + A Sbjct: 307 FQLYQATQAQRQQLQHQQAEQL-RALKHQHQQLETQKTLIEQHQQELQQTLSRSDQVTTA 365 Query: 401 ILHMLREQTK-NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + R + + +R+ L T L+ R + L + H+ +S L++ Sbjct: 366 LEELQRARVQLHRLDQLQTQAFPLLQR-QRELQLHLDRAHSRLSARLDELRA 416 >gi|169236237|ref|YP_001689437.1| hypothetical protein OE3155R [Halobacterium salinarum R1] gi|167727303|emb|CAP14089.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 682 Score = 40.9 bits (94), Expect = 0.47, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 5/79 (6%) Query: 26 HIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGI 84 ++ ++ V V GEI+ +SG F L D +DA + + E G Sbjct: 192 DALDDHVDDAVTVEGEIT--AARQTSGPTVFELTDETGAVDAAAFVEAGVRAYPEIEPGA 249 Query: 85 EFLVIGKITTFPGSSKYQI 103 + G + Q+ Sbjct: 250 VVQLTGTVE--RRRGDLQV 266 >gi|15790501|ref|NP_280325.1| hypothetical protein VNG1511C [Halobacterium sp. NRC-1] gi|10581003|gb|AAG19805.1| conserved hypothetical protein [Halobacterium sp. NRC-1] Length = 684 Score = 40.9 bits (94), Expect = 0.47, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 5/79 (6%) Query: 26 HIVESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGI 84 ++ ++ V V GEI+ +SG F L D +DA + + E G Sbjct: 194 DALDDHVDDAVTVEGEIT--AARQTSGPTVFELTDETGAVDAAAFVEAGVRAYPEIEPGA 251 Query: 85 EFLVIGKITTFPGSSKYQI 103 + G + Q+ Sbjct: 252 VVQLTGTVE--RRRGDLQV 268 >gi|325182278|emb|CCA16732.1| myosinlike protein putative [Albugo laibachii Nc14] gi|325187295|emb|CCA21835.1| myosinlike protein putative [Albugo laibachii Nc14] Length = 1267 Score = 40.9 bits (94), Expect = 0.47, Method: Composition-based stats. Identities = 46/364 (12%), Positives = 103/364 (28%), Gaps = 38/364 (10%) Query: 95 FPGSSKYQIIIES----LIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAV 150 FP +S+ Q +I ++ G L + L + PF+ ++ Sbjct: 555 FPRTSRTQFLIRHYAAPVLYESVGFLEKHKDALLP-----DLSELMRGSCKPFLCELFKP 609 Query: 151 ITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPD 210 I S A Q R + + V Q E KE+ I N C +P+ Sbjct: 610 IESEKSA------QSGRKRGGGALTLTTVGTQFKESLKELMTTIQSTNVHYVR--CIKPN 661 Query: 211 IIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGA 270 I + + ++ AI S + + HE D Sbjct: 662 AIKCSTTLNHEMVVSQLRCAGVIEAIRISRAAYPNRLQHEE-------ILDKFWLFVPEG 714 Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + Q L L + + + L L L R + Sbjct: 715 GKTP-------QDRCRLLMEHLELKTPEQYQMGKSRVYFQLGVLEE----LDDRRKKFLD 763 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ--HIEQIVKQHL 388 + ++ ++ + +K +I + R++ + + ++ + Sbjct: 764 QKATKLQAIMKCFTQRLKYLRQLEAILKLQSVIRCVIAMRRYTIILRGFIRLQAQWRGVR 823 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFILSHKIKSCHTSVSITTR 447 + ++ + +++ R++ K++ V++ + Sbjct: 824 ARRLATMMMRDKRAIAIQRNVRGYSKRRQYRLQRTNAIRLQAWTRMKLQRLKYLVALNEQ 883 Query: 448 ILQS 451 LQ+ Sbjct: 884 KLQA 887 >gi|239630932|ref|ZP_04673963.1| ABC transporter [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239527215|gb|EEQ66216.1| ABC transporter [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 1064 Score = 40.9 bits (94), Expect = 0.47, Method: Composition-based stats. Identities = 24/278 (8%), Positives = 88/278 (31%), Gaps = 13/278 (4%) Query: 180 KVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAI-AN 238 ++ + + + +L+ + K P+II G S +V + + Sbjct: 23 TIKFVQRADQTGSKVLKRTSFKVVGFVYSPEIISSINKGNSTSGSGDLKGYGVVTSNNFD 82 Query: 239 SSIPIISAIGH---ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 S + +++ + + + + D T + + +++ + Sbjct: 83 SDVYMMARLTYRNTKGLDPYSSQYTDRIQAHKTALNHLLQNAPQARLAAIKKQYQAKIDA 142 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + + LN+ + L Q L+ ++ ++ +EL+ ++ + + Sbjct: 143 GQKKLDDAKAQLNAAQEQLTTGAQQLATAKQQVAAKQQELDAGVKNGQAQIASGETQLQQ 202 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + ++RQ ++ +Q + Q + K+++ + ++ ++ Sbjct: 203 A------STQLSQSRQQLITAKQQLVAGQQQLDDKHQALVAAKQQLDAAKQQLDNSQQQL 256 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + ++ + L + Sbjct: 257 ATAKQQLTTGQQ-QLNAKQQDLTTAKQQLNAAKQQLDA 293 >gi|328713966|ref|XP_003245226.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like isoform 6 [Acyrthosiphon pisum] Length = 5295 Score = 40.9 bits (94), Expect = 0.48, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 +D P+ + ++ + R ++ L K ++ + + Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 +RL + + I + + + + ++ + E + Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435 I + ++ R L+ K L +++ I L ++ L R L ++ Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473 Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459 + H +L S TL Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499 >gi|328713958|ref|XP_003245223.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like isoform 3 [Acyrthosiphon pisum] Length = 5303 Score = 40.9 bits (94), Expect = 0.48, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 +D P+ + ++ + R ++ L K ++ + + Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 +RL + + I + + + + ++ + E + Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435 I + ++ R L+ K L +++ I L ++ L R L ++ Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473 Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459 + H +L S TL Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499 >gi|258545882|ref|ZP_05706116.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258518898|gb|EEV87757.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 899 Score = 40.9 bits (94), Expect = 0.48, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 43/130 (33%), Gaps = 5/130 (3%) Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-FLIHNIQKNRQHILEKQQHIE 381 R R N+ R R F+ N + + +I R+ +Q+ + Sbjct: 7 QVRLRAFDQMSRTFANVGRAGQRLLRQFDQNRNTLHRFDAQLRDIGAYRRQQQAIRQNSQ 66 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + + R L + + R+ + ++ ++++E S Sbjct: 67 DLTQMRQRVRDLHNQLRNGAAMGQSTAAMRRLRDEYNRARQSVSQLEQTRSR----EQQR 122 Query: 442 VSITTRILQS 451 ++ ++ L++ Sbjct: 123 LAQLSQRLRA 132 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 15/181 (8%), Positives = 49/181 (27%), Gaps = 3/181 (1%) Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329 AE+ + V+ + A + RL++ N+L + + R + Sbjct: 1 MAELNLQVRLRAFDQMSRTFANVGRAGQRLLRQFDQNRNTLHRFDAQLRDIGAYRRQQQA 60 Query: 330 -RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 R + + + + + +S + ++ + +EQ + Sbjct: 61 IRQNSQDLTQMRQRVRDLHNQLRNGAAMGQSTAAMRRLRDEYNRARQSVSQLEQ-TRSRE 119 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + + +++ + + L + + ++ Sbjct: 120 QQRLAQLSQRLRAAGIDTRNLASAEARLRREAGQTNDALNRQADR-LRRLAERQRQAEAR 178 Query: 449 L 449 L Sbjct: 179 L 179 >gi|328713956|ref|XP_003245222.1| PREDICTED: microtubule-actin cross-linking factor 1, isoforms 1/2/3/5-like isoform 2 [Acyrthosiphon pisum] Length = 5324 Score = 40.9 bits (94), Expect = 0.48, Method: Composition-based stats. Identities = 24/206 (11%), Positives = 60/206 (29%), Gaps = 8/206 (3%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 +D P+ + ++ + R ++ L K ++ + + Sbjct: 297 MSDRNFPSTLIEMKKLASDSTKFRNEELPPRHRDKQHLVHLYKELQKYFEAVGENDIEPE 356 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 +RL + + I + + + + ++ + E + Sbjct: 357 LQADAIDRTWNRLMMSYQDR-DSAIQEEIKRLERLQRLAEKVH--RETKRTDLKLDELET 413 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKI 435 I + ++ R L+ K L +++ I L ++ L R L ++ Sbjct: 414 RIVEEGRRADRLHPLDAKHNADQLETELRLSEDTIQSLFVDVQALREGRYVQAPELQKRV 473 Query: 436 KSCHTSVSITTRILQS--FAYKNTLK 459 + H +L S TL Sbjct: 474 EKLHQRWVNLRSLLHSKVLTPLATLS 499 >gi|260783656|ref|XP_002586889.1| hypothetical protein BRAFLDRAFT_129914 [Branchiostoma floridae] gi|229272018|gb|EEN42900.1| hypothetical protein BRAFLDRAFT_129914 [Branchiostoma floridae] Length = 479 Score = 40.9 bits (94), Expect = 0.48, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 7/193 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 +L + + LQ+ + E+ + + ++L +Y+ N +L+ Q Sbjct: 150 NLEHAKQSKGKNAMTEKYKELQAQIQRNESIIQMLQMQLKEYQENADVKVLR------QQ 203 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + R +++ LE R + + KS L Q R+ ++Q + Sbjct: 204 IEELRAQMESDKATNRRMLEKQRLDLERQMHEQVKNAKSSALSQAQQLAREAEEAEKQRL 263 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTK-NRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ Q R L K++ ++ + + R+ L + I R++ L ++ Sbjct: 264 REMEAQKRRQQELMAKQEASMASNSSAEEEVKRLKKLEMKQAEEIARLKKDLDRTNRTWE 323 Query: 440 TSVSITTRILQSF 452 +I + L + Sbjct: 324 KKFAILKQSLHAL 336 >gi|154311020|ref|XP_001554840.1| hypothetical protein BC1G_06628 [Botryotinia fuckeliana B05.10] gi|150851032|gb|EDN26225.1| hypothetical protein BC1G_06628 [Botryotinia fuckeliana B05.10] Length = 587 Score = 40.9 bits (94), Expect = 0.48, Method: Composition-based stats. Identities = 36/300 (12%), Positives = 83/300 (27%), Gaps = 23/300 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + E + + E F N + Sbjct: 273 LRLTVVDTPGFGDFVNNDESWRPIVDNIEQRFDAYLDAENKVNRMNIVDNRVHACVYFIQ 332 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E A + + I Sbjct: 333 PTGHALKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAAFK--SRILADIKHHDIQIFE 390 Query: 214 LARGGGSIEDLWHFNDEMI-----VRAIANSSIPIISA---IGHETDWTLA--DYAADLR 263 E+ N E++ ANS I G + W D Sbjct: 391 GPHYEKDDEETIAENKEIMDKVPFAVVGANSEITNSEGRKVRGRKYPWGTIEVDNEEHCD 450 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E + + + + + + ++ Sbjct: 451 FVKLRQMLIRTHMEELKEHTNNALYENYRSEKLTAMGVTQDPNVFKEVNPAVKQEEERQL 510 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + + +++ RQ + EK+ +E Sbjct: 511 HEQKLAKMEAEMKMVFQQKVAEKESKLKQSEEELYARHREMKEQLERQRQELEEKKSRVE 570 >gi|301614628|ref|XP_002936790.1| PREDICTED: switch-associated protein 70 [Xenopus (Silurana) tropicalis] Length = 563 Score = 40.9 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 20/204 (9%), Positives = 58/204 (28%), Gaps = 6/204 (2%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 + P P A + + + + K L + K L + Sbjct: 286 FQLPPPHKEARQKRRALRKKLLAEQEEMEKKMKELQVANETKQQELEVMRKELKEAADRA 345 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEKQQHI 380 + +L+ + + R+ + ++ NR + + E + + Sbjct: 346 MEEERKRQETQTQLQDRFQTEMERELLIRRQMEAQVAQKSNELQQNLNRVRELEEMYRKL 405 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-----IFYLHTHIKKLITRIEFILSHKI 435 ++ + + E+ ++ +L E+ R + K+ + L Sbjct: 406 QEALDDEKQARQEEENARLHQARLLEEEAAKRAMLEKLHKEQETAIKMTEAEKKELEQIR 465 Query: 436 KSCHTSVSITTRILQSFAYKNTLK 459 + ++ + L+ + L Sbjct: 466 EEKEKALQEAMQQLEQLEKERILA 489 >gi|206562276|ref|YP_002233039.1| hypothetical protein BCAM0413 [Burkholderia cenocepacia J2315] gi|198038316|emb|CAR54271.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 449 Score = 40.9 bits (94), Expect = 0.50, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 57/198 (28%), Gaps = 26/198 (13%) Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 LS +R LE + R+ + + L + Sbjct: 171 HMLSHLVGAANRADIRRLVALERENAELHAKLERQQARLHEMSTQRDAALQERDALHAHR 230 Query: 379 HIEQIVK--------QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 H + LR + E++A+ RE + RI + + R++ + Sbjct: 231 HAPPLAAESVLRDEVHALREALAARDERLALHTSRREAAEQRIAAEQASARAMRARLDDL 290 Query: 431 LSHKIKSCHTSVSITTRILQSF--AY-------KNTLKRG----YTSIQDTNNNFITQKR 477 + +K+ S + +Q+ + L RG Y + +N I + Sbjct: 291 M-AMVKTLRAEASALEQAVQASTDDPAEHAAHSLSIL-RGTRVVYVGGRPGSNRAIRRIV 348 Query: 478 NLATKTRILINFFDGQAN 495 A + DG Sbjct: 349 ETAGGE---VTLHDGGIE 363 >gi|239980815|ref|ZP_04703339.1| single-stranded DNA-binding protein [Streptomyces albus J1074] gi|291452674|ref|ZP_06592064.1| single-stranded DNA-binding protein 2 [Streptomyces albus J1074] gi|291355623|gb|EFE82525.1| single-stranded DNA-binding protein 2 [Streptomyces albus J1074] Length = 197 Score = 40.9 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGIKRTVYELDVDEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|195578928|ref|XP_002079314.1| GD23884 [Drosophila simulans] gi|194191323|gb|EDX04899.1| GD23884 [Drosophila simulans] Length = 696 Score = 40.9 bits (94), Expect = 0.51, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 6/182 (3%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 +H ++ L+ ++ + TL + + + S R + Sbjct: 298 SGDHSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395 N + + + H ++K R + QH+EQ + R I + Sbjct: 358 RNERTRQRLQEMREQREAQQWELHSQRHRLEKERLELRTLAPQHLEQ--RDQKRQIERQV 415 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + +++ L + ++ N + + ++L + + Sbjct: 416 ERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472 Query: 456 NT 457 Sbjct: 473 AV 474 >gi|86606057|ref|YP_474820.1| hypothetical protein CYA_1387 [Synechococcus sp. JA-3-3Ab] gi|86554599|gb|ABC99557.1| conserved domain protein [Synechococcus sp. JA-3-3Ab] Length = 618 Score = 40.9 bits (94), Expect = 0.52, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 51/160 (31%), Gaps = 6/160 (3%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-R 356 + + L + L S L + + LE + + + Sbjct: 256 EQHRAAQQRIQELEEQLRAQQDRGSAQVQALAEQLQAAQAELETLRRHCHELTEWQSQAK 315 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 +K L +Q+++Q + +Q +E + L E++ ++ + + + + Sbjct: 316 LKLQELGSRLQQHQQAEAQLRQALEHKEAELAALSQSLQEQQHQLQVAQSTKARLIADLA 375 Query: 415 YLHTHIKKLITRIE---FILSHKIKSCHTSVSITTRILQS 451 + + I R+ +++ + LQ+ Sbjct: 376 HARQEASQTIHRLRGELQEAQTQLQVTQERLQEVQAQLQA 415 >gi|291400707|ref|XP_002716758.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus] Length = 1254 Score = 40.9 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 63/188 (33%), Gaps = 10/188 (5%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 645 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 704 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 705 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVTRKEK 762 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-----YKN 456 + L++Q + + + ++ ++ ++ + S + N Sbjct: 763 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 821 Query: 457 --TLKRGY 462 TLK GY Sbjct: 822 PSTLKEGY 829 >gi|328772569|gb|EGF82607.1| hypothetical protein BATDEDRAFT_86540 [Batrachochytrium dendrobatidis JAM81] Length = 1169 Score = 40.9 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 12/169 (7%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 + ++LE +L + + + L + + + R L + Sbjct: 714 EDRQHELDLEQQLQHEFEEKLHQERQAWKELQQQREQDPERQHERQQRRKMLEERHKQEH 773 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 R+ + + + ++RQ ++ ++ +++ +++ + + K+K+ Sbjct: 774 HKKKEREEKQRQKELEQQPELEQRLQEFESRQRSIQLEKMLDRDFEENFKKQGRKLKQKL 833 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 ++ + + + K + + Sbjct: 834 E--KERQQNPEEQHERQQRRKGSEERHKQEHHKKKEREEKQRQKELEQQ 880 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 11/185 (5%), Positives = 54/185 (29%), Gaps = 3/185 (1%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 + + +S + + + + + N ++ + R Sbjct: 792 PELEQRLQEFESRQRSIQLEKMLDRDFEENFKKQGRKLKQKLEKERQQNPEEQHERQQRR 851 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 R + + + + + + + + + ++RQ ++ ++ +++ +++ Sbjct: 852 KGSEERHKQEHHKKKEREEKQRQKELEQQPELE-QRLQEFESRQRSIQLEKMLDRDFEEN 910 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 + + K+K+ ++ + + + K + + Sbjct: 911 FKKQGRKLKQKLE--KERQQNPEEQHERQQRRKGSEERHKQEHHKKKEREEKQRQKELEQ 968 Query: 448 ILQSF 452 LQ Sbjct: 969 RLQEL 973 >gi|282900460|ref|ZP_06308409.1| hypothetical protein CRC_01828 [Cylindrospermopsis raciborskii CS-505] gi|281194653|gb|EFA69601.1| hypothetical protein CRC_01828 [Cylindrospermopsis raciborskii CS-505] Length = 363 Score = 40.9 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 15/159 (9%), Positives = 50/159 (31%), Gaps = 2/159 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 L + + I + + +L + + ++ + + R Sbjct: 119 NELHEQSGDPITNESEKLAQEFRNFADSLTVIHRRYAQEISNASESFQDHLQRVAVAYER 178 Query: 346 KYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + +NR+ L ++ ++Q ++ Q Q + + ++ I + Sbjct: 179 MLDTYELQLNRLNKKHSELSEQLETSQQKFIDTQSRYYQKHSELSEQLETSQQRFIDNQN 238 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 Q +N I + + + + L +++++ Sbjct: 239 RYYLQMENAIEAQLSRLIAKHSELYNQLDNQLETSQQRF 277 >gi|118082455|ref|XP_416120.2| PREDICTED: similar to PTPRF interacting protein alpha 2 [Gallus gallus] Length = 1253 Score = 40.9 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 33/351 (9%), Positives = 97/351 (27%), Gaps = 19/351 (5%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 223 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 ++ I +G + I ++ + D +++L + Sbjct: 224 AHIQRKI--AAGEGPAESEHIEGMEPGQKVHEKRLSNGSIDSNDETSQVIELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + E L+ ++ T E+ + + + E Sbjct: 282 YEMAQMK-------------ERMAALSSRVGEVEQEAETARKELIKTEEMNSKYQRDIRE 328 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 A + + + S ++ + LE + Sbjct: 329 AMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQLEDKNRQLQER 388 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQ 408 +++ + + + E Q I + K R+ +E++ + + + Q Sbjct: 389 LELAEQKLQQT--MRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEAQLEEKNQ 446 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 R ++ R+ + + + + + + KN L Sbjct: 447 ELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|156399738|ref|XP_001638658.1| predicted protein [Nematostella vectensis] gi|156225780|gb|EDO46595.1| predicted protein [Nematostella vectensis] Length = 543 Score = 40.9 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 17/180 (9%), Positives = 63/180 (35%), Gaps = 3/180 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 ++ PV+ + + A + I + + N + + Q + R + Sbjct: 364 KILEPVRLLWRRVEDHEFAYAISCIESAYEELMIEFNKNIHGCRDICQDFAYFRQQELDR 423 Query: 332 PRELE-HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + E + + FR + + + R ++ + + + ++ ++++ +R Sbjct: 424 EMKKEVDWIRKMCFRNDQIMANKLARKDTEDEARRLGMMKLRLDQEMD--LKVMEAEMRE 481 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 E++A + ++ + + ++ R E + +++ + + L+ Sbjct: 482 EQRLLNEELAEMVRREKERGAQDNNYLRRRQDILQRGEQAMRRQLREREKEIEEARKRLE 541 >gi|73951388|ref|XP_536182.2| PREDICTED: similar to A-kinase anchor protein 13 isoform 2 [Canis familiaris] Length = 2786 Score = 40.9 bits (94), Expect = 0.53, Method: Composition-based stats. Identities = 18/205 (8%), Positives = 58/205 (28%), Gaps = 17/205 (8%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ L++++ + + Sbjct: 2441 DSHQMNASKGGEKEEGEDGQDLRRTESDSGLKKGGNANLVFMLKRNSEQLVQSVIHLHEL 2500 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ R + + + +++K RQ + Q+ Sbjct: 2501 LSTLQGVVLQQDSYIEDQKLLLAERALTRSSSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2560 Query: 381 EQIVKQHLRY---------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424 Q +++ R E++ ++A + + + ++ Sbjct: 2561 AQHLEEKRRREREWEARERALQEREARLAQREQDVWRGQQDLDREREELQHKKGAYQCDL 2620 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ +++ + L Sbjct: 2621 ERLRTA-QKQLEREQEQLKRDAERL 2644 >gi|189031481|sp|A4IFI1|CC157_BOVIN RecName: Full=Coiled-coil domain-containing protein 157 Length = 688 Score = 40.9 bits (94), Expect = 0.54, Method: Composition-based stats. Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 3/198 (1%) Query: 257 DYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D P T A K+ L+ L + L +AL Sbjct: 260 DSMGHRPLPAATVGLWAAEQSKDLACLGKLVGLLRAQLEEAEGQKDRLRMQVGELEQALQ 319 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 ++ + E + ++ + ++ + Sbjct: 320 EEQAARQRQAQEAEQHRAQWERERQQLLAETSD-LKTKVATLEGELKQQRESTQAVESKA 378 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q E + ++++ +L + +I + T + K R++ ++ H+ Sbjct: 379 QQLQAEAEHRLEAERQVQHLEQQVELLAGRLDGASQQIRWASTELDKEKARVDSMVRHQ- 437 Query: 436 KSCHTSVSITTRILQSFA 453 +S + L S Sbjct: 438 ESLQAKQRALLQQLDSLD 455 >gi|331085071|ref|ZP_08334158.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408771|gb|EGG88236.1| ATP-dependent DNA helicase RecG [Lachnospiraceae bacterium 9_1_43BFAA] Length = 685 Score = 40.9 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 17/93 (18%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL--------------KD 59 ++V +L + + V + GEI + G Y +L KD Sbjct: 26 VFTVGDLIRYFPRGYDVYDPPVSI-GEIQEQKVQAVRGMIYGTLQVSSRGAQVTSGYLKD 84 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 I + ++ + + + G ++ G++ Sbjct: 85 MTGTIKVVWYR--MPFLRNTLQNGQIVILRGRV 115 >gi|257387954|ref|YP_003177727.1| phosphoesterase RecJ domain protein [Halomicrobium mukohataei DSM 12286] gi|257170261|gb|ACV48020.1| phosphoesterase RecJ domain protein [Halomicrobium mukohataei DSM 12286] Length = 636 Score = 40.9 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 10/113 (8%) Query: 35 VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW--KGTLNKIEFLPEEGIEFLVIGKI 92 V VRGE+ + + G F L+D + + G G V G++ Sbjct: 124 VTVRGEVLQIKQ--TGGPTIFQLRDESGVVPCAAFDEAGVRAFPAVDL--GDVAEVTGRV 179 Query: 93 TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145 + Q+ ++ L G G A+ + L+E +P+ P Sbjct: 180 E--SRNGGVQVEVDELTVLG-GDRERAVRDDIDEALDEAA-EPADIDPLVEWP 228 >gi|161504420|ref|YP_001571532.1| exonuclease subunit SbcC [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865767|gb|ABX22390.1| hypothetical protein SARI_02531 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 1046 Score = 40.9 bits (94), Expect = 0.55, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 48/166 (28%), Gaps = 14/166 (8%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 +T L L ++ + R R L E + +++ + Sbjct: 239 QHTQQQHLHWLTRKNELHAELRARQQSLYEAQEAREKAQPQLAALTLAQPARQLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK------NR 412 +++ RQ I E ++ + LR I + L R++ K + Sbjct: 299 IQEQTTAVERVRQQINEVNARLQSAYRLRLR-IRACAYRQFTQLDATRQRLKTWLTEHDG 357 Query: 413 IFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQSFAYKN 456 I + + + + ++ + TR L + Sbjct: 358 IRVWRSELAGWRALLTQQSNERAQLSQWQRQLMSDTRQLDALPPLA 403 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 14/139 (10%), Positives = 46/139 (33%), Gaps = 7/139 (5%) Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH-ILEKQQ 378 L+ + + + + E + ++ + +H + RQ + E Q+ Sbjct: 212 LLAEEQLQQLVASLQALTDEEKRLLASQHTQQQHLHWLTRKNELHAELRARQQSLYEAQE 271 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-- 436 E+ Q + ++ ++ + + I ++ R++ +++ Sbjct: 272 AREKAQPQLAALTLAQPARQLRPHWERIQEQTTAVERVRQQINEVNARLQSAYRLRLRIR 331 Query: 437 ----SCHTSVSITTRILQS 451 T + T + L++ Sbjct: 332 ACAYRQFTQLDATRQRLKT 350 >gi|168786234|ref|ZP_02811241.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC869] gi|189373584|gb|EDU92000.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC869] Length = 1047 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|320656009|gb|EFX23925.1| exonuclease subunit SbcC [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320662566|gb|EFX29955.1| exonuclease subunit SbcC [Escherichia coli O55:H7 str. USDA 5905] Length = 1047 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|291281300|ref|YP_003498118.1| Nuclease SbcCD, C subunit [Escherichia coli O55:H7 str. CB9615] gi|209744260|gb|ACI70437.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|290761173|gb|ADD55134.1| Nuclease SbcCD, C subunit [Escherichia coli O55:H7 str. CB9615] Length = 1047 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|209744254|gb|ACI70434.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|320643765|gb|EFX12888.1| exonuclease subunit SbcC [Escherichia coli O157:H- str. 493-89] gi|320649116|gb|EFX17694.1| exonuclease subunit SbcC [Escherichia coli O157:H- str. H 2687] gi|320665136|gb|EFX32229.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. LSU-61] Length = 1047 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|158259613|dbj|BAF85765.1| unnamed protein product [Homo sapiens] Length = 903 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 10/169 (5%), Positives = 49/169 (28%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L + +L+ + + + Sbjct: 321 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEEWQTWAQQEHQLKEHYQALQEES 380 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 381 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 440 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 441 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 489 >gi|154149742|ref|YP_001403360.1| hypothetical protein Mboo_0194 [Candidatus Methanoregula boonei 6A8] gi|153998294|gb|ABS54717.1| domain of unknown function DUF1743 [Methanoregula boonei 6A8] Length = 407 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 8/77 (10%) Query: 34 HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGK 91 VRG ++G GH F+++DN + I + ++ +I G E + G Sbjct: 258 SYRVRGVVTGRPVTGEGGHVSFAIRDNEAEIRCMAYEPTKNFREIIRALVPGDEIIAAGS 317 Query: 92 ITTFPGSSKYQIIIESL 108 + I +E + Sbjct: 318 ---YKKG---SINLEKI 328 >gi|15800123|ref|NP_286135.1| exonuclease subunit SbcC [Escherichia coli O157:H7 EDL933] gi|168749849|ref|ZP_02774871.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4113] gi|168761593|ref|ZP_02786600.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4501] gi|168768338|ref|ZP_02793345.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4486] gi|168776307|ref|ZP_02801314.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4196] gi|168783253|ref|ZP_02808260.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4076] gi|168800270|ref|ZP_02825277.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC508] gi|195938542|ref|ZP_03083924.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. EC4024] gi|208806791|ref|ZP_03249128.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4206] gi|208814881|ref|ZP_03256060.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4045] gi|208823003|ref|ZP_03263321.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4042] gi|209396784|ref|YP_002269034.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4115] gi|217326260|ref|ZP_03442344.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. TW14588] gi|254791575|ref|YP_003076412.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. TW14359] gi|261223873|ref|ZP_05938154.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str. FRIK2000] gi|261256413|ref|ZP_05948946.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str. FRIK966] gi|12513240|gb|AAG54743.1|AE005218_8 ATP-dependent dsDNA exonuclease [Escherichia coli O157:H7 str. EDL933] gi|187768269|gb|EDU32113.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4196] gi|188015846|gb|EDU53968.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4113] gi|188999354|gb|EDU68340.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4076] gi|189362387|gb|EDU80806.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4486] gi|189368061|gb|EDU86477.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4501] gi|189377379|gb|EDU95795.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC508] gi|208726592|gb|EDZ76193.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4206] gi|208731529|gb|EDZ80217.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4045] gi|208737196|gb|EDZ84880.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4042] gi|209158184|gb|ACI35617.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. EC4115] gi|209744256|gb|ACI70435.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|209744258|gb|ACI70436.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|209744262|gb|ACI70438.1| ATP-dependent dsDNA exonuclease [Escherichia coli] gi|217322481|gb|EEC30905.1| nuclease SbcCD, C subunit [Escherichia coli O157:H7 str. TW14588] gi|254590975|gb|ACT70336.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli O157:H7 str. TW14359] gi|320192807|gb|EFW67447.1| Exonuclease SbcC [Escherichia coli O157:H7 str. EC1212] gi|320638385|gb|EFX08099.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. G5101] gi|326341154|gb|EGD64946.1| Exonuclease SbcC [Escherichia coli O157:H7 str. 1044] gi|326346070|gb|EGD69809.1| Exonuclease SbcC [Escherichia coli O157:H7 str. 1125] Length = 1047 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|15829701|ref|NP_308474.1| exonuclease subunit SbcC [Escherichia coli O157:H7 str. Sakai] gi|13359904|dbj|BAB33870.1| ATP-dependent dsDNA exonuclease [Escherichia coli O157:H7 str. Sakai] Length = 1047 Score = 40.9 bits (94), Expect = 0.56, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQNTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|163916357|gb|AAI57670.1| LOC100135363 protein [Xenopus (Silurana) tropicalis] Length = 599 Score = 40.9 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 20/204 (9%), Positives = 58/204 (28%), Gaps = 6/204 (2%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 + P P A + + + + K L + K L + Sbjct: 322 FQLPPPHKEARQKRRALRKKLLAEQEEMEKKMKELQVANETKQQELEVMRKELKEAADRA 381 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEKQQHI 380 + +L+ + + R+ + ++ NR + + E + + Sbjct: 382 MEEERKRQETQTQLQDRFQTEMERELLIRRQMEAQVAQKSNELQQNLNRVRELEEMYRKL 441 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-----IFYLHTHIKKLITRIEFILSHKI 435 ++ + + E+ ++ +L E+ R + K+ + L Sbjct: 442 QEALDDEKQARQEEENARLHQARLLEEEAAKRAMLEKLHKEQETAIKMTEAEKKELEQIR 501 Query: 436 KSCHTSVSITTRILQSFAYKNTLK 459 + ++ + L+ + L Sbjct: 502 EEKEKALQEAMQQLEQLEKERILA 525 >gi|76802252|ref|YP_327260.1| hypothetical protein NP3224A [Natronomonas pharaonis DSM 2160] gi|76558117|emb|CAI49703.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 635 Score = 40.9 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 5/88 (5%) Query: 35 VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 V + G+I + G FSL+D + ++ + E + G + T Sbjct: 124 VHLEGDIVQIKQTA--GPTIFSLRDGDGVVPCAAFESAGVRAYPAVELDDTVRITGAVET 181 Query: 95 FPGSSKYQIIIESL-IPSGSGTLLTALE 121 Q+ ++ L G E Sbjct: 182 HE--GALQLEVDKLVRLRGEAADEVRTE 207 >gi|318040328|ref|ZP_07972284.1| secreted protein MPB70 precursor-like [Synechococcus sp. CB0101] Length = 576 Score = 40.9 bits (94), Expect = 0.57, Method: Composition-based stats. Identities = 14/179 (7%), Positives = 43/179 (24%), Gaps = 4/179 (2%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPR 333 P + S + + + + Q + Sbjct: 218 TPEGQAWLSQPVQSLSAQQWQALWEHWQSWLQAMEQQRFGFTPGQCCAYRCWQAPAPAGS 277 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 L I H + +R Q+ Q + ++ +E + + Sbjct: 278 AAPEPLAINQALASYHQQRLGSRQVQQRQHQLRQRLEQLLQRERSQMEHQQQLLDQVENS 337 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTRIL 449 ++ ++ A + Q + K ++ ++ +++ + L Sbjct: 338 DQLQQQADALLCLPQPSRDQVAEAQKLYKRARKLRRSVAAITPRLEQHRQRIEQLETSL 396 >gi|320102047|ref|YP_004177638.1| hypothetical protein Isop_0494 [Isosphaera pallida ATCC 43644] gi|319749329|gb|ADV61089.1| protein of unknown function DUF820 [Isosphaera pallida ATCC 43644] Length = 320 Score = 40.9 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%) Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 ++ H ++ RQ E Q+ EQ + ++E+ A R+ + R Sbjct: 206 FLEEAEARHQAERERQARAEAQRQAEQERQARAEAQRQAEQERQARAEAQRQAEQERQAR 265 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + R + + ++ L + Sbjct: 266 AEAQRQAEQERQARAEAQRQAEEARRLAEEQARLIA 301 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 1/106 (0%) Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 E+ + R ++ RQ E Q+ EQ + ++E+ Sbjct: 204 EVFLEEAEARHQAERERQARAEAQRQAEQERQARAEAQRQAEQERQARAEAQRQAEQERQ 263 Query: 400 AILHMLREQTKNRIFYLH-THIKKLITRIEFILSHKIKSCHTSVSI 444 A R+ + R + R+ + I + Sbjct: 264 ARAEAQRQAEQERQARAEAQRQAEEARRLAEEQARLIAELQARLRQ 309 >gi|300698136|ref|YP_003748797.1| transmembrane protein, DUF802 [Ralstonia solanacearum CFBP2957] gi|299074860|emb|CBJ54428.1| putative transmembrane protein, DUF802 [Ralstonia solanacearum CFBP2957] Length = 698 Score = 40.9 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 29/281 (10%), Positives = 62/281 (22%), Gaps = 42/281 (14%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D + + NL + + L Sbjct: 340 LDAHRQSNEALAEHWRTSLDRLTDTFDHRSANLLEGVAARLDTTASRMSQAWTEALSQQD 399 Query: 316 NSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + L+ R L + + R + + + S Sbjct: 400 QTHAQLTGHHQRALEAATATFEQHAVTLQRTLHQSHADLQAGLASRDEQRLAAWTDTLGS 459 Query: 360 DF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 L + QQ + + + IA + L + Sbjct: 460 MATTLSQQWDQAGARTASHQQAICETLARTAHDISARTQAHASDTIAEMSRLVQAASEAP 519 Query: 414 FYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNN 470 + +L ++ + ++ ++ +L + + +T +R + Sbjct: 520 KAAAEVVAELRQKLSDSMVRDTEMLEERGRLLATVQTLLDAVNHASTEQR-----TAVDG 574 Query: 471 NFITQKRNLATKTRILINFFD---------GQANAIVINKA 502 T L R+ F D G A A V A Sbjct: 575 LISTSADLL---DRVGTRFADQVQAEGERLGTAAAQVTGSA 612 >gi|189501758|ref|YP_001957475.1| ATP-dependent DNA helicase RecG [Candidatus Amoebophilus asiaticus 5a2] gi|189497199|gb|ACE05746.1| hypothetical protein Aasi_0311 [Candidatus Amoebophilus asiaticus 5a2] Length = 695 Score = 40.9 bits (94), Expect = 0.58, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 11/135 (8%) Query: 56 SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP----- 110 +LKD I + ++ ++ GI + + GK T + +S Y I+ + Sbjct: 84 TLKDETGVISLVWFQKINGILK-QLRPGILYQLFGKPTVY--NSCYTIVHPEMEIFTAQT 140 Query: 111 ---SGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167 + EK K ++ N I P + I+ + + Sbjct: 141 TQEKTLIPVYHTTEKLKASYIDSKYIRRVQANLIEQFPIHLPETLPEDLCAQYKIIDKKT 200 Query: 168 CRFPLRVIIFPVKVQ 182 + P +Q Sbjct: 201 ALANIHFPATPEILQ 215 >gi|283782434|ref|YP_003373189.1| metal dependent phosphohydrolase [Pirellula staleyi DSM 6068] gi|283440887|gb|ADB19329.1| metal dependent phosphohydrolase [Pirellula staleyi DSM 6068] Length = 324 Score = 40.9 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 5/65 (7%) Query: 49 SSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106 +G+ Y L+ D + ++W ++ E G V G + + Q+I+ Sbjct: 30 RNGNLYLQLRMTDKTGSLTGMLW-NVTEQLGQSVEVGHYLRVQGTTQLY--NGGMQMIVT 86 Query: 107 SLIPS 111 + P Sbjct: 87 RIDPV 91 >gi|260866556|ref|YP_003232958.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O111:H- str. 11128] gi|257762912|dbj|BAI34407.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O111:H- str. 11128] gi|323178341|gb|EFZ63919.1| exonuclease sbcC [Escherichia coli 1180] Length = 1047 Score = 40.9 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQVLAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQRIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|260853617|ref|YP_003227508.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O26:H11 str. 11368] gi|257752266|dbj|BAI23768.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O26:H11 str. 11368] gi|323152136|gb|EFZ38429.1| exonuclease sbcC [Escherichia coli EPECa14] Length = 1047 Score = 40.9 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQVLAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQRIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|208022624|ref|NP_001101253.2| kinesin family member 16B [Rattus norvegicus] Length = 1311 Score = 40.9 bits (94), Expect = 0.60, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328 A + P E + LE + + + + L Q + R Sbjct: 587 SAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQKSD--KAELERMQQEVETRRKET 644 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + + R++ E + R + N + + + + Q LE+Q+ E+ + Sbjct: 645 EIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEEERLREQQGLEQQKRQEEDSFFRI 704 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT----SVSI 444 R +E + + Q + +LH ++ + +++ V+ Sbjct: 705 REELRRLQELNSHEQAEKGQPLQDLDWLHREQDAQSAKL-QLEKRRLEEQEKEQVLRVAH 763 Query: 445 TTRILQ 450 L+ Sbjct: 764 LEEQLR 769 >gi|291410931|ref|XP_002721755.1| PREDICTED: apoptosis-stimulating protein of p53, 1 [Oryctolagus cuniculus] Length = 1086 Score = 40.9 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 15/215 (6%), Positives = 57/215 (26%), Gaps = 17/215 (7%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D AA + + + + + + ++ + + L Sbjct: 128 LQDMAARQQQQIESQQQMLVAKEQRLHFLKQQERRQQQSLSENEKLQKLKERVEAQENKL 187 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + NL + R F +++ L + + Q + Sbjct: 188 KKIRAM-----RGQVDYSKIMNGNLSAEVERFSAMFQEKKQEVQTAIL--RVDQLSQQLE 240 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---- 430 + ++ + + + ++ L+ + ++ +++ + Sbjct: 241 DLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRTAEV 300 Query: 431 --LSHKIKSCHTSVSITTRILQ----SFAYKNTLK 459 + +I + L + + ++ L Sbjct: 301 AMMDRRIGELRERLYGKKAQLTRVNGTSSPQSPLS 335 >gi|260434986|ref|ZP_05788956.1| chromosome segregation protein SMC [Synechococcus sp. WH 8109] gi|260412860|gb|EEX06156.1| chromosome segregation protein SMC [Synechococcus sp. WH 8109] Length = 1202 Score = 40.9 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 18/178 (10%), Positives = 59/178 (33%), Gaps = 7/178 (3%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 + Q+ + + L++ ++ + SR RL + Sbjct: 344 QAQRQNLATRRQQWQLQSRELERDPHQDALSAANDNCKAAEAAVEISRRRLADVVGRSGA 403 Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--K 395 +E R R + L+ Q ++ + ++++ +E++ ++ + Sbjct: 404 WVEEQKRRSGRRQELQSSVTP---LLEEHQLLQERLRQERERLEELTQEQHQDGTDGDAV 460 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451 ++++A L + I +++ + + +++ T + L+S Sbjct: 461 EQQLATLEATWQNLLQAIADGKQELQQTAESLAIQQRTRSRLEQEQTRLEREIARLES 518 Score = 40.1 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 79/257 (30%), Gaps = 17/257 (6%) Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 I +G + + A+ A +A A ++ + + + Sbjct: 861 IERLGDQENALAAEETRLQEAVKALASAHGAWRQQQSDLQEKRKELEQQQTDLQERFGSQ 920 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 ++ + Q L + + L+RL + E +E + + Sbjct: 921 RRARDAAEAEVGRQRQALQQAEWNLERLKEDREGLIEEQ-RSGAVRLQEMEQALPDPRPE 979 Query: 364 HN-------IQKNRQHILEKQQHIEQIVKQHLRYIFLEKK---------EKIAILHMLRE 407 ++ + + QQ +E + ++ + + E++ +L+ RE Sbjct: 980 IPEALQLAGLEALQTDLQAIQQRMEALEPVNMLALEELEALEERLNELNERLDVLNNERE 1039 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQD 467 + RI + T + + + S+S LQ + L+ G T + Sbjct: 1040 ELLLRIETVATLRQDAFMEAFTAVDGHFREIFASLSDGDGHLQLENPEEPLEGGLTLVAH 1099 Query: 468 TNNNFITQKRNLATKTR 484 + + +++ + Sbjct: 1100 PKGKTVRRLASMSGGEK 1116 >gi|149041259|gb|EDL95192.1| kinesin family member 16B (predicted), isoform CRA_a [Rattus norvegicus] Length = 1297 Score = 40.9 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328 A + P E + LE + + + + L Q + R Sbjct: 573 SAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQKSD--KAELERMQQEVETRRKET 630 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + + R++ E + R + N + + + + Q LE+Q+ E+ + Sbjct: 631 EIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEEERLREQQGLEQQKRQEEDSFFRI 690 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT----SVSI 444 R +E + + Q + +LH ++ + +++ V+ Sbjct: 691 REELRRLQELNSHEQAEKGQPLQDLDWLHREQDAQSAKL-QLEKRRLEEQEKEQVLRVAH 749 Query: 445 TTRILQ 450 L+ Sbjct: 750 LEEQLR 755 >gi|189423130|ref|YP_001950307.1| metal dependent phosphohydrolase [Geobacter lovleyi SZ] gi|189419389|gb|ACD93787.1| metal dependent phosphohydrolase [Geobacter lovleyi SZ] Length = 371 Score = 40.9 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 29/63 (46%), Gaps = 5/63 (7%) Query: 48 HSSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105 +G Y +LK D ID +W +++++ ++G + G + + K Q++ Sbjct: 29 AKNGKPYMNLKFMDKSGEIDGKLW-DNVDELDKTFQKGDFVRIRGTASLYM--GKMQLVA 85 Query: 106 ESL 108 + + Sbjct: 86 KEI 88 >gi|66819079|ref|XP_643199.1| hypothetical protein DDB_G0276361 [Dictyostelium discoideum AX4] gi|60471299|gb|EAL69261.1| hypothetical protein DDB_G0276361 [Dictyostelium discoideum AX4] Length = 789 Score = 40.9 bits (94), Expect = 0.61, Method: Composition-based stats. Identities = 15/191 (7%), Positives = 46/191 (24%), Gaps = 2/191 (1%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 ++ + + +++ K L + Sbjct: 160 SNKSIDQTIKTIKELTFDPNEELKKIEAEIEMRKKEEEAMLEAKKQKEKQEQLKLTEQQR 219 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFR--KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 + R++R RE + L R + + L Q + I+ + Sbjct: 220 IEREQKQRMERAEREQQQRLREEYERRLNMELQKKLEIERQEQELTRRKQLELEQIMILK 279 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + E ++ ++K ++A + + + +++ Sbjct: 280 KQEEAGLRILQEQREHQEKVRLAKEKEEELKKRTMEEEARRSAIRAQEIARMSKQQQLEE 339 Query: 438 CHTSVSITTRI 448 + R Sbjct: 340 EAKRLEQQKRQ 350 >gi|91209463|ref|YP_539449.1| exonuclease subunit SbcC [Escherichia coli UTI89] gi|117622658|ref|YP_851571.1| exonuclease subunit SbcC [Escherichia coli APEC O1] gi|218557306|ref|YP_002390219.1| exonuclease subunit SbcC [Escherichia coli S88] gi|237707611|ref|ZP_04538092.1| exonuclease subunit SbcC [Escherichia sp. 3_2_53FAA] gi|91071037|gb|ABE05918.1| exonuclease SbcC [Escherichia coli UTI89] gi|115511782|gb|ABI99856.1| ATP-dependent dsDNA exonuclease [Escherichia coli APEC O1] gi|218364075|emb|CAR01740.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli S88] gi|226898821|gb|EEH85080.1| exonuclease subunit SbcC [Escherichia sp. 3_2_53FAA] gi|294490953|gb|ADE89709.1| nuclease SbcCD, C subunit [Escherichia coli IHE3034] gi|307628134|gb|ADN72438.1| exonuclease subunit SbcC [Escherichia coli UM146] gi|315289890|gb|EFU49280.1| nuclease sbcCD, subunit C [Escherichia coli MS 110-3] gi|323952992|gb|EGB48860.1| exonuclease SbcC [Escherichia coli H252] gi|323958589|gb|EGB54292.1| exonuclease SbcC [Escherichia coli H263] Length = 1047 Score = 40.5 bits (93), Expect = 0.62, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEGSRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R+ Sbjct: 299 IAEYSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRL 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|212537003|ref|XP_002148657.1| septin AspB [Penicillium marneffei ATCC 18224] gi|210068399|gb|EEA22490.1| septin AspB [Penicillium marneffei ATCC 18224] Length = 464 Score = 40.5 bits (93), Expect = 0.62, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 93/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 150 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLEAENKVNRMNIVDNRVHACVYFIQ 209 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 210 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQYHSIQIFE 267 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ + + G + W + D Sbjct: 268 GPRYELDDEETIAENQEIMSKVPFAVVGANAEVTTPDGRKVRGRRYPWGVIEVDNEEHCD 327 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ + E ++ + ++ + ++ + ++ + Sbjct: 328 FVKLRQMLIRTHMEELKEHTNNVLYENYRSDKLTQMGVAQDPSVFKEVNPAVKQEEERAL 387 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ E + K + + + + +++ RQ + EK+ +E Sbjct: 388 HEQKLAKMEAEMKMVFEQKVREKESKLKQSEDELYARHREMKDQLERQRQDLEEKKARLE 447 Query: 382 QIVKQHLRYIFLEKKEK 398 + Sbjct: 448 SGRPLEKESKRKGFSLR 464 >gi|257059354|ref|YP_003137242.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802] gi|256589520|gb|ACV00407.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8802] Length = 1226 Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats. Identities = 12/151 (7%), Positives = 50/151 (33%), Gaps = 3/151 (1%) Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + Q L + + +E ++N+ + + + Q++ Sbjct: 348 QRNQLEHRQQELINLSQQNQKSLQETQNNIAQLEHNLTHLTQETLELDNNTIPFLIQQRD 407 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R + + +++++ ++ + T N + + ++ Sbjct: 408 RTRQTLEMVRTQANAIAEASDAWVQEQSALSRKITAIQDTLNPQRTQQAKLNERRQQLNK 467 Query: 430 ILSH---KIKSCHTSVSITTRILQSFAYKNT 457 + + +++ T ++ + L + +++ T Sbjct: 468 TIDNETQQLQEIETELNSQHQELNTLSHQAT 498 >gi|219112917|ref|XP_002186042.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582892|gb|ACI65512.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 809 Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats. Identities = 23/218 (10%), Positives = 60/218 (27%), Gaps = 9/218 (4%) Query: 240 SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 + ++ GH T A A P L Sbjct: 241 PVATMATSGHTQPETPFGTPAQTATKPTNSGAPTGPPKPPIPPKPATQKAQDSAEAKEAL 300 Query: 300 IKYK--INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + + + SL + L ++ + R L+R +E + Sbjct: 301 KQVRILRRHVLSLNQELEKAESEMQAQRDELERAADRMEKDRVRRKEE-----QEKEKVR 355 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 ++ L ++ Q + + + +Q V R + + ++ + I Sbjct: 356 HAEELRALKSQHDQILKDVKARSDQQVNDVRRQLKELENRRMQEGGDYNNELAEAIQREQ 415 Query: 418 THIKK--LITRIEFILSHKIKSCHTSVSITTRILQSFA 453 +++ ++ + + +I + L+S + Sbjct: 416 DMMQRYSMLEDEKSTMLSQIATLQAQQESLGSRLESLS 453 >gi|149041260|gb|EDL95193.1| kinesin family member 16B (predicted), isoform CRA_b [Rattus norvegicus] Length = 1256 Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 7/186 (3%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328 A + P E + LE + + + + L Q + R Sbjct: 573 SAVMLYNPGLEFERQQREELEKLESKRKLIEEMEEKQKSD--KAELERMQQEVETRRKET 630 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + + R++ E + R + N + + + + Q LE+Q+ E+ + Sbjct: 631 EIVQRQIRKQEESLKRRSFHIENKLKDLLAEKERFEEERLREQQGLEQQKRQEEDSFFRI 690 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT----SVSI 444 R +E + + Q + +LH ++ + +++ V+ Sbjct: 691 REELRRLQELNSHEQAEKGQPLQDLDWLHREQDAQSAKL-QLEKRRLEEQEKEQVLRVAH 749 Query: 445 TTRILQ 450 L+ Sbjct: 750 LEEQLR 755 >gi|242810470|ref|XP_002485588.1| septin AspB [Talaromyces stipitatus ATCC 10500] gi|218716213|gb|EED15635.1| septin AspB [Talaromyces stipitatus ATCC 10500] Length = 467 Score = 40.5 bits (93), Expect = 0.64, Method: Composition-based stats. Identities = 34/317 (10%), Positives = 93/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + + + + E F N + Sbjct: 153 LRLTVVDTPGFGDFVNNDDSWRPIVENIEQRFDAYLEAENKVNRMNIVDNRVHACVYFIQ 212 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E Q + I Sbjct: 213 PTGHSLKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIALFKQ--RILADIQYHSIQIFE 270 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R E+ N E++ A+ ++ + + G + W + D Sbjct: 271 GPRYELDDEETIAENQEIMSKVPFAVVGANAEVTTPDGRKVRGRRYPWGVIEVDNEEHCD 330 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ + E ++ + ++ + ++ + ++ + Sbjct: 331 FVKLRQMLIRTHMEELKEHTNNVLYENYRSDKLTQMGVAQDPSVFKEVNPAVKQEEERAL 390 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ E + K + + + + +++ RQ + EK+ +E Sbjct: 391 HEQKLAKMEAEMKMVFEQKVREKESKLKQSEDELYARHREMKDQLERQRQDLEEKKARLE 450 Query: 382 QIVKQHLRYIFLEKKEK 398 + Sbjct: 451 SGRPLEKESKRKGFSLR 467 >gi|323164187|gb|EFZ49994.1| exonuclease sbcC [Shigella sonnei 53G] Length = 1047 Score = 40.5 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|281177567|dbj|BAI53897.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli SE15] Length = 1047 Score = 40.5 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEQAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|194217648|ref|XP_001504851.2| PREDICTED: similar to Centrobin (Centrosomal BRCA2-interacting protein) (LYST-interacting protein 8) isoform 1 [Equus caballus] Length = 894 Score = 40.5 bits (93), Expect = 0.66, Method: Composition-based stats. Identities = 13/169 (7%), Positives = 46/169 (27%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 LE + + S + L L R + +L+ + + Sbjct: 318 ELEQQRCRALQEERDEARAGQLSEHRQLETLQVALEEERQTRAQQEHQLKERYQALQEEG 377 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + + +++ + + R + +++++ Sbjct: 378 QAQLEREKGNTQREAQAAREAQQQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 437 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + +I +++ R+ ++ + + LQ Sbjct: 438 ESQRLQIESELAVQLEQQVTERLAQAQESSLRQAASLREHHRKQLQDLN 486 >gi|333008589|gb|EGK28057.1| exonuclease sbcC [Shigella flexneri VA-6] Length = 1047 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|332760674|gb|EGJ90962.1| exonuclease sbcC [Shigella flexneri 4343-70] gi|333007760|gb|EGK27236.1| exonuclease sbcC [Shigella flexneri K-218] Length = 1047 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|325282740|ref|YP_004255281.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Deinococcus proteolyticus MRP] gi|324314549|gb|ADY25664.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Deinococcus proteolyticus MRP] Length = 605 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 17/140 (12%), Positives = 46/140 (32%), Gaps = 8/140 (5%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI-INRIKSDFLIHNIQKNRQHILEK 376 D+ L+ +R + E+ NL + + + ++ L + R + + Sbjct: 81 DRLLAQARETAEEHRAEVAQNLREQRQQLEDRRSQLTEQHLQVQALQGTVSAERLQLEQD 140 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLR------EQTKNRIFYLHTHIKKLITRIEFI 430 ++ +E + + E++ A R + R + R++ Sbjct: 141 RERLEAERQALKAEMAQEREHLSADRQEYRAERDAMNRELERQSRRAEQLDVRGERLD-A 199 Query: 431 LSHKIKSCHTSVSITTRILQ 450 L +++ ++ LQ Sbjct: 200 LEERLEKQGRDLAAQAEELQ 219 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 17/177 (9%), Positives = 50/177 (28%), Gaps = 9/177 (5%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 LE + + + AL + S ++ + + + + Sbjct: 26 QQRERLEQQHEQQALERADTIRREAEADALALREQAR--SETQAAQAAALAQAQAQADRL 83 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAI 401 + + + + Q + +QH++ Q ++ + L+ ++ Sbjct: 84 LAQARETAEEHRAEVAQNLREQRQQLEDRRSQLTEQHLQVQALQGTVSAERLQLEQDRER 143 Query: 402 LHMLREQTKNRIFYLHTHIKKLIT--RIEF-ILSHKIKSCHTSVSITT---RILQSF 452 L R+ K + H+ R E ++ +++ L + Sbjct: 144 LEAERQALKAEMAQEREHLSADRQEYRAERDAMNRELERQSRRAEQLDVRGERLDAL 200 >gi|323170476|gb|EFZ56126.1| exonuclease sbcC [Escherichia coli LT-68] Length = 1047 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|74310966|ref|YP_309385.1| exonuclease subunit SbcC [Shigella sonnei Ss046] gi|73854443|gb|AAZ87150.1| ATP-dependent dsDNA exonuclease [Shigella sonnei Ss046] Length = 1047 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|333010836|gb|EGK30262.1| exonuclease sbcC [Shigella flexneri K-272] gi|333021335|gb|EGK40588.1| exonuclease sbcC [Shigella flexneri K-227] Length = 1047 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|300918226|ref|ZP_07134832.1| nuclease sbcCD, subunit C [Escherichia coli MS 115-1] gi|300414611|gb|EFJ97921.1| nuclease sbcCD, subunit C [Escherichia coli MS 115-1] Length = 1047 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|154506663|ref|ZP_02043120.1| hypothetical protein RUMGNA_03930 [Ruminococcus gnavus ATCC 29149] gi|153793312|gb|EDN75735.1| hypothetical protein RUMGNA_03930 [Ruminococcus gnavus ATCC 29149] Length = 242 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 56/153 (36%), Gaps = 3/153 (1%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L S+ + + L RL++ +++ + + F I + + Sbjct: 16 MGMTNEQLLQSITTVIVDRFDMLDGRIERLEQRVDKMDTEFRQKFEQIDQKFEQIDQKFE 75 Query: 359 SDFLI-HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 I + + I K + I+Q +Q R F + +K + EQ + + Sbjct: 76 QIGQKFEQIDRKFEQIDRKFEQIDQKFEQIDR-KFEQIDQKFEQIDRKFEQIDQKFDQMD 134 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 ++++ + E + +++ + + T R L Sbjct: 135 RKLEQIDQKFEQ-IDRRLEDMNQRLEGTNRRLD 166 >gi|119179866|ref|XP_001241463.1| hypothetical protein CIMG_08626 [Coccidioides immitis RS] Length = 734 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 21/217 (9%), Positives = 64/217 (29%), Gaps = 1/217 (0%) Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 V+ I I +L D D+ A++ + +++ L + Sbjct: 256 ATVQKCPFCKIEICGMCRGPVHVSLLDCPGDIGLEATLEEADLCGWRRCPQCRAMVELIS 315 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 ++I + T + + ++ L E E+ Sbjct: 316 GCRHMICKCRAQFCYTCGARWRTCQCTEVDQRRREEELQDRRFERNAAAELEARELADAL 375 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 I + + ++ + E+++ E+ ++ + + ++A+ + + Q Sbjct: 376 AEIERLEQREAEEIVRREEARRRAEEEEAREREAQRMMAIAESTRNMRLALDRINKLQQT 435 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 I L +++ + + + + R Sbjct: 436 VLIKRHEADASSLQEKLQDQMK-QFELRRQRLESALR 471 >gi|24111775|ref|NP_706285.1| exonuclease subunit SbcC [Shigella flexneri 2a str. 301] gi|30061893|ref|NP_836064.1| exonuclease subunit SbcC [Shigella flexneri 2a str. 2457T] gi|24050561|gb|AAN41992.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2a str. 301] gi|30040137|gb|AAP15870.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2a str. 2457T] gi|281599728|gb|ADA72712.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2002017] gi|313646988|gb|EFS11445.1| exonuclease sbcC [Shigella flexneri 2a str. 2457T] gi|332764270|gb|EGJ94506.1| exonuclease sbcC [Shigella flexneri K-671] gi|333022044|gb|EGK41289.1| exonuclease sbcC [Shigella flexneri K-304] Length = 1047 Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|291414864|ref|XP_002723676.1| PREDICTED: nesprin-3 [Oryctolagus cuniculus] Length = 1122 Score = 40.5 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 51/184 (27%), Gaps = 4/184 (2%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 ++ + H L + L Y+ +L Q LS + RL + Sbjct: 930 QLYWALSLHRTWMYQALSVYQTWLYWALDLYQARLYQALSLHWTRLYQALSVYQIRLYQA 989 Query: 332 PRELEHNLEIIIFRKYRHFNH---IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + L + + + L + Q + Q + Q + + Sbjct: 990 LDLYQARLYWALSLHWTRLYQALDLYQTRLYWALSLHQTWMYQALSVYQTRLYQALGLYQ 1049 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTR 447 A L+ R+ L+ + R+ LS + ++ R Sbjct: 1050 AQQDQALGLYQARLYQALSLHWTRLTRLYQALGLYQARLYQALSLHWTRLYQALGLALPR 1109 Query: 448 ILQS 451 LQ+ Sbjct: 1110 RLQA 1113 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 16/164 (9%), Positives = 43/164 (26%), Gaps = 9/164 (5%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L L + Y L R + + + Sbjct: 905 QKTRQYQALGLHQTRLYQALDLYQTQLYWALSLHRTWMYQALSVYQTWLYWALDLYQARL 964 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI----- 413 L + + Q + Q + Q + + ++ L+ + + R+ Sbjct: 965 YQALSLHWTRLYQALSVYQIRLYQALDLYQARLYWALSLHWTRLYQALDLYQTRLYWALS 1024 Query: 414 ---FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL-QSFA 453 +++ + TR+ L ++ + L Q+ + Sbjct: 1025 LHQTWMYQALSVYQTRLYQALGLYQAQQDQALGLYQARLYQALS 1068 >gi|116333410|ref|YP_794937.1| DNA polymerase III, alpha subunit [Lactobacillus brevis ATCC 367] gi|116098757|gb|ABJ63906.1| DNA polymerase III catalytic subunit, DnaE type [Lactobacillus brevis ATCC 367] Length = 1121 Score = 40.5 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 22/179 (12%), Positives = 53/179 (29%), Gaps = 25/179 (13%) Query: 17 VSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKI 76 VSEL+ + + V + V +I R A+ + D + + I+ +I Sbjct: 940 VSELTANTRVTV-----LLYVI-KIRQIRTKRGEPMAFVTGSDETADVSVTIFPNQFRQI 993 Query: 77 EFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136 +V GK+ QI+ + + + ++ + + Sbjct: 994 SEWLATDQVIVVRGKV---EQQRGLQIVADQVSLA-------------DQIPVKPVADQH 1037 Query: 137 HKNPIP---FIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIAN 192 +P + + + + R P+ VI++ + + Sbjct: 1038 TTPTLPAGARWFIRVDQQHTDRAIAQQLAQFLTAHRGPVPVIVYQPQTDEKRILPKTQW 1096 >gi|165926650|ref|ZP_02222482.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. F1991016] gi|165935941|ref|ZP_02224511.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. IP275] gi|167421647|ref|ZP_02313400.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167468102|ref|ZP_02332806.1| hypothetical protein YpesF_09434 [Yersinia pestis FV-1] gi|229838813|ref|ZP_04458972.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. PEXU2] gi|229899381|ref|ZP_04514524.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. India 195] gi|165916086|gb|EDR34693.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. IP275] gi|165921578|gb|EDR38775.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. F1991016] gi|166960566|gb|EDR56587.1| exonuclease SbcC [Yersinia pestis biovar Orientalis str. MG05-1020] gi|229687783|gb|EEO79856.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. India 195] gi|229695179|gb|EEO85226.1| Exonuclease SbcC [Yersinia pestis biovar Orientalis str. PEXU2] Length = 1235 Score = 40.5 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L ++Q L + RL +L + ++H+ + Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 F +Q+ + E+Q H + + L+ + + + + + YL Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + L + + + + L + + Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529 >gi|194219603|ref|XP_001917261.1| PREDICTED: serine/threonine kinase 10 [Equus caballus] Length = 972 Score = 40.5 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 15/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + L + + ++ + + L+K R+ L R Sbjct: 725 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 782 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + K+ + + + ++ + +Q Sbjct: 783 KEREQMQRYNQRMVEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSPAEQRE 842 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + + CH + T+ Sbjct: 843 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLLIEHETQK 902 Query: 449 LQSFA 453 L++ Sbjct: 903 LKALD 907 >gi|190347332|gb|EDK39582.2| hypothetical protein PGUG_03680 [Meyerozyma guilliermondii ATCC 6260] Length = 321 Score = 40.5 bits (93), Expect = 0.69, Method: Composition-based stats. Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 9/209 (4%) Query: 247 IGHETDWTLADYAADL-----RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 I E + + D AP P + + + +L+ + R I Sbjct: 28 INPECYHNICESCVDRIFSLGPAPCPYPKCGKILRKNKFKKQVFDDLKIEKEVDLRRRIS 87 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 N L + L ++ L L + +++ + ++I Sbjct: 88 AIYNKTEDDFDDLKEYNSYLEH----VETLVFNLINGVDVEATEQEIKKYEQDHKIDILE 143 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + + + + Q+ +E++ ++ L+ + E + ++ +R+ + Sbjct: 144 INMRESQKTSDLEKYQEAMERMKQEKLKIQHQMELEDLEYQKQQKQSLLDRLSSSNIDSD 203 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQ 450 ++I + ++ ++ + T L+ Sbjct: 204 EIIAQNNSRVNKRLSMRKQQLQQITSQLE 232 >gi|332761698|gb|EGJ91977.1| exonuclease sbcC [Shigella flexneri 2747-71] gi|332768500|gb|EGJ98683.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 2930-71] Length = 1047 Score = 40.5 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|301330746|ref|ZP_07223347.1| nuclease sbcCD, subunit C [Escherichia coli MS 78-1] gi|300843318|gb|EFK71078.1| nuclease sbcCD, subunit C [Escherichia coli MS 78-1] Length = 1047 Score = 40.5 bits (93), Expect = 0.70, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|325661173|ref|ZP_08149800.1| hypothetical protein HMPREF0490_00533 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472680|gb|EGC75891.1| hypothetical protein HMPREF0490_00533 [Lachnospiraceae bacterium 4_1_37FAA] Length = 139 Score = 40.5 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 17/93 (18%) Query: 14 EYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSL--------------KD 59 ++V +L + + V + GEI + G Y +L KD Sbjct: 26 VFTVGDLIRYFPRGYDVYDPPVSI-GEIQEQKVQAVRGMIYGTLQVSSRGAQVTSGYLKD 84 Query: 60 NHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 I + ++ + + + G ++ G++ Sbjct: 85 MTGTIKIVWYR--MPFLRNTLQNGQIVILRGRV 115 >gi|300924113|ref|ZP_07140106.1| nuclease sbcCD, subunit C [Escherichia coli MS 182-1] gi|300419666|gb|EFK02977.1| nuclease sbcCD, subunit C [Escherichia coli MS 182-1] Length = 1047 Score = 40.5 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|284165987|ref|YP_003404266.1| nucleic acid binding OB-fold tRNA/helicase-type [Haloterrigena turkmenica DSM 5511] gi|284015642|gb|ADB61593.1| nucleic acid binding OB-fold tRNA/helicase-type [Haloterrigena turkmenica DSM 5511] Length = 735 Score = 40.5 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 26 HIVESNLSHV-CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 +E+ + V + GEI+G +SG F L+D + ++ + Sbjct: 237 EAIENQVGSVVRLEGEITGV--RQTSGPTVFELRDETATVECAAF 279 >gi|289192816|ref|YP_003458757.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus sp. FS406-22] gi|288939266|gb|ADC70021.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus sp. FS406-22] Length = 202 Score = 40.5 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESL 108 +EG V G+I+ + +YQII+ + Sbjct: 102 IKEGDYVEVKGRISVY--QGRYQIILNDI 128 >gi|110804420|ref|YP_687940.1| exonuclease subunit SbcC [Shigella flexneri 5 str. 8401] gi|110613968|gb|ABF02635.1| ATP-dependent dsDNA exonuclease [Shigella flexneri 5 str. 8401] Length = 1047 Score = 40.5 bits (93), Expect = 0.71, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|256079983|ref|XP_002576263.1| serine/threonine protein kinase [Schistosoma mansoni] gi|238661527|emb|CAZ32499.1| serine/threonine kinase [Schistosoma mansoni] Length = 2290 Score = 40.5 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 22/234 (9%), Positives = 71/234 (30%), Gaps = 2/234 (0%) Query: 216 RGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275 R + L D++ V + +SAI + + D + + Sbjct: 1790 RADKAETQLKSLRDQIAVMLTERGRLVSLSAIDSQRLSDMQLQLNDAIMKKESAEISLRE 1849 Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + + + + + + + + + L + L + + R R+ RE+ Sbjct: 1850 ATLRLERLNTTHNQTLILDQMRNEFESTRSQLRTAQTELIHYKKNEELLRERVANYEREI 1909 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 L+ + + + + I N + I+ + + + + + Sbjct: 1910 SD-LQQEVTLLRTRHDQLQSSIAVGRTAENSSEVHNQIVTLTDEKQLLQDEIDQLRTQVE 1968 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITR-IEFILSHKIKSCHTSVSITTRI 448 + ++ +L ++ R + + + + + ++ +S T Sbjct: 1969 RLRLNNTQLLSQRDTARQEARESEMATVRAKELGEATQQALEREVHRLSTITEQ 2022 >gi|163847799|ref|YP_001635843.1| SMC domain-containing protein [Chloroflexus aurantiacus J-10-fl] gi|222525668|ref|YP_002570139.1| SMC domain-containing protein [Chloroflexus sp. Y-400-fl] gi|163669088|gb|ABY35454.1| SMC domain protein [Chloroflexus aurantiacus J-10-fl] gi|222449547|gb|ACM53813.1| SMC domain protein [Chloroflexus sp. Y-400-fl] Length = 1032 Score = 40.5 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 20/175 (11%), Positives = 51/175 (29%), Gaps = 13/175 (7%) Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN--LEIIIFR 345 + + +L + + L R L I R Sbjct: 217 FWQQAVAEAEQRQHTLQQQRTALEAEFTQASEKLRHLEQEAHRQREVQNRIAILTGEIQR 276 Query: 346 KYRHFNHIINRIKS----DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + RI I+ + + +E++ + RY L +++ Sbjct: 277 YSNELRELNARIAQAEQTIAQRPLIEAGLAELHAARADLERLEQLRTRYDELMARKR--- 333 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSFAY 454 L+++ K + L+ + I +++ + ++ V+ + L+ A Sbjct: 334 --ELQQELKAELNLLNERLSHAIQQLDRLYAEAQRLVGLQQRVAAIRQRLRELAP 386 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 16/152 (10%), Positives = 45/152 (29%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + N + +A+ ++Q + + L E E + + + + Sbjct: 209 QPIANQVPFWQQAVAEAEQRQHTLQQQRTALEAEFTQASEKLRHLEQEAHRQREVQNRIA 268 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L IQ+ + E I Q + + +E + ++ + + Sbjct: 269 ILTGEIQRYSNELRELNARIAQAEQTIAQRPLIEAGLAELHAARADLERLEQLRTRYDEL 328 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 ++ L ++ + +S + L Sbjct: 329 MARKRELQQELKAELNLLNERLSHAIQQLDRL 360 >gi|282880443|ref|ZP_06289150.1| ATP-dependent DNA helicase RecG [Prevotella timonensis CRIS 5C-B1] gi|281305546|gb|EFA97599.1| ATP-dependent DNA helicase RecG [Prevotella timonensis CRIS 5C-B1] Length = 700 Score = 40.5 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 53/439 (12%), Positives = 117/439 (26%), Gaps = 36/439 (8%) Query: 28 VESNLSHVCVRGEISGYRGIHSSGH-----AYFSLKDNHSRIDAIIWKGTLNKIEFLPEE 82 + +L V ++G+I + H A+FS D +D + ++G + + Sbjct: 55 LRGDLPFVQLKGKILSFEEFAMGAHRKRVVAHFS--DGTGVVDLVWFRG-AQYVYKTYKV 111 Query: 83 GIEFLVIGKITTFPGSSKYQI------IIESLIPSGSGT--LLTALEKRKKKLLEEGLFS 134 E++V G+ + + +YQ + + S G E+ KK L Sbjct: 112 NEEYIVFGRPSIYG--GRYQFAHPDIDKVTDVQLSEMGMQPYYMTTERMKKMGLTSRSLE 169 Query: 135 DQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAI 194 K + + + T P I L IS L I +P ++ + + Sbjct: 170 KLTKTLVEKLFEQTISETLPPY--IIGPLHLISRTEALHKIHYPKSLEDVQRAQVRLKFE 227 Query: 195 L----QLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI----VRAIANSSIPIISA 246 QLN L+ R + GS+ ++ N+ + I A Sbjct: 228 ELFYVQLNILRYAHDQRRKYRGYVFTQVGSLFHFFYHNNLPFELTNAQKRVMHEIRNDMA 287 Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 G + + + + + + + E + K+ Sbjct: 288 TGQQMNRLVQGDVGSGKTLV-ALMSMLIAIGNGFQACMMAPTEILAEQHFATIRKFLRQM 346 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI 366 + + F+ + + H Sbjct: 347 PVRIELLTGIVKGKKREEILNGLLTGEVQILVGTHAVIEDNVQFSRL--GLAVVDEQHRF 404 Query: 367 -QKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 R + K Q + R + + + + + + Sbjct: 405 GVAQRAKLWGKSQQPPHILVMTATPIPRTLAMTIYGDLDVSVIDELPPGRKPIQTIHKYD 464 Query: 422 KLITRIEFILSHKIKSCHT 440 +T + + +I+ Sbjct: 465 NQLTSLYQGIRQQIRQGRQ 483 >gi|194218419|ref|XP_001916972.1| PREDICTED: similar to CDC42 binding protein kinase gamma (predicted) [Equus caballus] Length = 1549 Score = 40.5 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 13/206 (6%), Positives = 58/206 (28%), Gaps = 9/206 (4%) Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 +++ + D + P + + + L L Sbjct: 363 SNFDVDDDTLNHPGTLPPPSHGTFSGHHLPFVGFTYTSSSPSPESSSEQVAALEQRLRCL 422 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK-SDFLIHNIQKN 369 + + L + LE + + + ++ S + + + Sbjct: 423 EQEKTELSRKLQEALQMPSDHRE-----LEQLRKEVQTLQDRLSEMLRESKAPVSQTEGS 477 Query: 370 RQHILEKQQHIEQIVKQHL--RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + QQ ++++++ + +++++ +E+ R+ ++ Sbjct: 478 PGQHSDLQQERDRLLQELAEAQTRLQMQEQELGRAQGRQEELLQRLQEAQEREASTASQ- 536 Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453 L+ +++ + + + + Sbjct: 537 TQALNSQLEEARDARRELQAQVATLS 562 >gi|156100779|ref|XP_001616083.1| hypothetical protein [Plasmodium vivax SaI-1] gi|148804957|gb|EDL46356.1| hypothetical protein, conserved [Plasmodium vivax] Length = 1785 Score = 40.5 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 27/256 (10%), Positives = 72/256 (28%), Gaps = 22/256 (8%) Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +A G + D E A P+ E +I L Sbjct: 1187 CTAYGETHPRSFCPQKGDCPVNCAKRGEEKAPPLSNTRMCVSSKCEVDEREELITLESIA 1246 Query: 304 INTLNSLLKA--LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 ++ + L + + + L + + R ++ + Sbjct: 1247 MHNEKFIKAYGNLQMCTTLEALKKEQEIDLSVRFKAAIRERKEVIKRKTEEAQRSVEREK 1306 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRY-----IFLEKKEKIAILHMLREQ----TKNR 412 I + Q +E Q + + + L +++ ++ R + +N+ Sbjct: 1307 QIRESIRKAQEYIESQLRRKNSLYRREEEAVTSIKKLHLRDRQMGRNIRRCRNDMVLQNK 1366 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 + Y+ + KL+ R + ++ ++ + S +Q+ +N Sbjct: 1367 LHYVKVEMVKLLHRHMAAIQLDMERKREELNQVEEKIHSN----------EMMQNESNEL 1416 Query: 473 ITQKRNLATKTRILIN 488 + R + + + Sbjct: 1417 AKKVRQ-KKEQILSLQ 1431 >gi|51595265|ref|YP_069456.1| ATP-dependent dsDNA exonuclease [Yersinia pseudotuberculosis IP 32953] gi|186894282|ref|YP_001871394.1| SMC domain-containing protein [Yersinia pseudotuberculosis PB1/+] gi|51588547|emb|CAH20155.1| putative ATP-dependent dsDNA exonuclease [Yersinia pseudotuberculosis IP 32953] gi|186697308|gb|ACC87937.1| SMC domain protein [Yersinia pseudotuberculosis PB1/+] Length = 1229 Score = 40.5 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L ++Q L + RL +L + ++H+ + Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 F +Q+ + E+Q H + + L+ + + + + + YL Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + L + + + + L + + Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529 >gi|19921240|ref|NP_609632.1| CG6116 [Drosophila melanogaster] gi|20140917|sp|Q9VK07|UVRAG_DROME RecName: Full=UVRAG-like protein gi|7298036|gb|AAF53277.1| CG6116 [Drosophila melanogaster] gi|17862042|gb|AAL39498.1| LD05963p [Drosophila melanogaster] gi|220943274|gb|ACL84180.1| CG6116-PA [synthetic construct] Length = 696 Score = 40.5 bits (93), Expect = 0.72, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 6/182 (3%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 ++ ++ L+ ++ + TL + + + S R + Sbjct: 298 SGDYSAHQYHSMGRALSVLLAEQQQIAPLTLYNAQQLTRRIEALSSQQRLLKAERETFRQ 357 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEK 395 N K + + H ++K R + QH+EQ + R I + Sbjct: 358 RNERTRQLLKEMREQREAQQWELHSQRHRLEKERLELRTLAPQHLEQ--RDQKRQIERQV 415 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 + +++ L + ++ N + + ++L + + Sbjct: 416 ERRMSTLVLELQEIYNIQNVGGRQFSICGIAFPH-MEQYTSESRQ--AANAQLLDNVSPL 472 Query: 456 NT 457 Sbjct: 473 AV 474 >gi|170025495|ref|YP_001722000.1| SMC domain-containing protein [Yersinia pseudotuberculosis YPIII] gi|169752029|gb|ACA69547.1| SMC domain protein [Yersinia pseudotuberculosis YPIII] Length = 1229 Score = 40.5 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L ++Q L + RL +L + ++H+ + Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 F +Q+ + E+Q H + + L+ + + + + + YL Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + L + + + + L + + Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529 >gi|239636287|ref|ZP_04677289.1| chromosome segregation protein SMC [Staphylococcus warneri L37603] gi|239597642|gb|EEQ80137.1| chromosome segregation protein SMC [Staphylococcus warneri L37603] Length = 1189 Score = 40.5 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 55/169 (32%), Gaps = 3/169 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + + + + + + + + L LS S L E L+ + + Sbjct: 683 MRHQLENYQKQTQEFEKQFQSHQAQSEKLSEKYFELSQSYNNLKEKAHGYELELDRLKKQ 742 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK--EKIAILH 403 + + + K++ + +KQQ + +I Q + +K + Sbjct: 743 ETHLKDEHEEFEFEKNDGYQSDKSKATLEQKQQQLSEIQSQLKQLEADIEKYTKLSKEGK 802 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 QT+ + + + + RI+ +I+ + T + L + Sbjct: 803 ETTTQTQQHLHQKQSDLAVVKERIK-GQQQEIERLEKQLQSTEQQLDTV 850 >gi|208019317|emb|CAQ14338.1| finTRIM family protein [Danio rerio] Length = 498 Score = 40.5 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 19/201 (9%), Positives = 47/201 (23%), Gaps = 8/201 (3%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D + ++ NL + LI + + Sbjct: 34 CDSCTGRKHKATKSCLVCLNSYCQNHLEQHENLFKGKRH---NLIDATGRLQEMICRKHD 90 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + + R + ++ + + ++ Q+ Q Sbjct: 91 KLLEIYRRTDQRCICMLCMVDEHKDHETVSTSAERTEKQKQLGEI--QRKFQQQIQKRER 148 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 K Q + + VK H R K+ + L + + + I+ + Sbjct: 149 KLQELNEAVKIHERSAQTAVKDSERVFSELIRSIERKRSEVTQMIRDQEKITVGRAEGLL 208 Query: 436 KSCHTSVSITT---RILQSFA 453 K + L+ + Sbjct: 209 KQLQQEIDDLRGKNAKLEQLS 229 >gi|153949358|ref|YP_001402099.1| nuclease SbcCD, C subunit [Yersinia pseudotuberculosis IP 31758] gi|152960853|gb|ABS48314.1| nuclease SbcCD, C subunit [Yersinia pseudotuberculosis IP 31758] Length = 1229 Score = 40.5 bits (93), Expect = 0.73, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L ++Q L + RL +L + ++H+ + Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 F +Q+ + E+Q H + + L+ + + + + + YL Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + L + + + + L + + Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529 >gi|297618776|ref|YP_003706881.1| hypothetical protein Mvol_0248 [Methanococcus voltae A3] gi|332321758|sp|D7DRZ8|TIAS_METV3 RecName: Full=tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS; Short=tRNA(Ile2)-agm2C synthetase; AltName: Full=tRNA(Ile2) agmatidine synthetase gi|297377753|gb|ADI35908.1| domain of unknown function DUF1743 [Methanococcus voltae A3] Length = 508 Score = 40.5 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 6/91 (6%) Query: 37 VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGT--LNKIEFLPEEGIEFLVIGKITT 94 + G IS + GH L D+ I+ I ++ T I G V G I Sbjct: 356 LSGYISEEFTEITGGHVLIELTDSTGSINCIAYEPTKKFRHIIRELAIGDLITVYGTIRE 415 Query: 95 FPGSSKYQIIIESLIPSGSGTLLTALEKRKK 125 YQ+ IE + L ++K + Sbjct: 416 -EP---YQLNIEKINVVKLNNLYEKVKKCEC 442 >gi|221632204|ref|YP_002521425.1| putative DNA helicase [Thermomicrobium roseum DSM 5159] gi|221156835|gb|ACM05962.1| putative DNA helicase [Thermomicrobium roseum DSM 5159] Length = 948 Score = 40.5 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 46/168 (27%), Gaps = 18/168 (10%) Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L + + H + R + Sbjct: 632 LAQPVSDVRGIVSTEAFEEIWRAFAARPLPDLDAMLLEHRRQVEARLAPERRRIEER--L 689 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 QQ + ++ +Q R+ + + ++ RI L +L ++ ++ Sbjct: 690 QTIQQTLHELTQQRFRHPCHACQRR-----KEHQRNLQRIARLEQERAELEAQLGREIAA 744 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGY--------TSIQDTNNNFI 473 + + + +L+ F Y L RGY + DTN I Sbjct: 745 EERRVRELLRGIRNVLEHFGY---LHRGYPTSKADTLADVFDTNGLII 789 >gi|22124883|ref|NP_668306.1| ATP-dependent dsDNA exonuclease [Yersinia pestis KIM 10] gi|45440575|ref|NP_992114.1| ATP-dependent dsDNA exonuclease [Yersinia pestis biovar Microtus str. 91001] gi|108811047|ref|YP_646814.1| hypothetical protein YPN_0882 [Yersinia pestis Nepal516] gi|145600099|ref|YP_001164175.1| hypothetical protein YPDSF_2840 [Yersinia pestis Pestoides F] gi|166010994|ref|ZP_02231892.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166212888|ref|ZP_02238923.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167423530|ref|ZP_02315283.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229896034|ref|ZP_04511204.1| Exonuclease SbcC [Yersinia pestis Pestoides A] gi|229901272|ref|ZP_04516394.1| Exonuclease SbcC [Yersinia pestis Nepal516] gi|270489461|ref|ZP_06206535.1| nuclease sbcCD, subunit C [Yersinia pestis KIM D27] gi|294504933|ref|YP_003568995.1| periplasmic binding transport protein [Yersinia pestis Z176003] gi|21957717|gb|AAM84557.1|AE013701_2 ATP-dependent dsDNA exonuclease [Yersinia pestis KIM 10] gi|45435432|gb|AAS60991.1| ATP-dependent dsDNA exonuclease [Yersinia pestis biovar Microtus str. 91001] gi|108774695|gb|ABG17214.1| hypothetical protein YPN_0882 [Yersinia pestis Nepal516] gi|145211795|gb|ABP41202.1| hypothetical protein YPDSF_2840 [Yersinia pestis Pestoides F] gi|165989994|gb|EDR42295.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205675|gb|EDR50155.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167057700|gb|EDR67446.1| nuclease SbcCD, C subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229681201|gb|EEO77295.1| Exonuclease SbcC [Yersinia pestis Nepal516] gi|229700957|gb|EEO88986.1| Exonuclease SbcC [Yersinia pestis Pestoides A] gi|262362997|gb|ACY59718.1| periplasmic binding transport protein [Yersinia pestis D106004] gi|262366921|gb|ACY63478.1| periplasmic binding transport protein [Yersinia pestis D182038] gi|270337965|gb|EFA48742.1| nuclease sbcCD, subunit C [Yersinia pestis KIM D27] gi|294355392|gb|ADE65733.1| periplasmic binding transport protein [Yersinia pestis Z176003] gi|320016392|gb|ADV99963.1| Exonuclease SbcC [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 1229 Score = 40.5 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L ++Q L + RL +L + ++H+ + Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 F +Q+ + E+Q H + + L+ + + + + + YL Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + L + + + + L + + Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529 >gi|14520587|ref|NP_126062.1| hypothetical protein PAB0247 [Pyrococcus abyssi GE5] gi|5457803|emb|CAB49293.1| Predicted DNA-binding protein [Pyrococcus abyssi GE5] Length = 422 Score = 40.5 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 18/114 (15%) Query: 22 YHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNK 75 +K I +V VRG+++ + H +F ++D ++ ++ + K Sbjct: 257 KKIKDI--RLYDNVIVRGKVAS-KYWEKGRHVFFEIEDETGKMRVAAFEPTKKFRNYVRK 313 Query: 76 IEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 + G E +V G + I +E P L+ E RK + Sbjct: 314 LLP----GDEVIVAGGVK--EHEGVLTINLEKFYPV---KLVPKREYRKPRCPR 358 >gi|162421047|ref|YP_001607635.1| nuclease SbcCD, C subunit [Yersinia pestis Angola] gi|162353862|gb|ABX87810.1| nuclease SbcCD, C subunit [Yersinia pestis Angola] Length = 1220 Score = 40.5 bits (93), Expect = 0.74, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L ++Q L + RL +L + ++H+ + Sbjct: 369 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 422 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 F +Q+ + E+Q H + + L+ + + + + + YL Sbjct: 423 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 482 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + L + + + + L + + Sbjct: 483 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 520 >gi|296314914|ref|ZP_06864855.1| SMC family protein [Neisseria polysaccharea ATCC 43768] gi|296838099|gb|EFH22037.1| SMC family protein [Neisseria polysaccharea ATCC 43768] Length = 1161 Score = 40.5 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + RQ Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQARQDETAAQIQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|332321829|sp|Q8PZP7|TIAS_METMA RecName: Full=tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS; Short=tRNA(Ile2)-agm2C synthetase; AltName: Full=tRNA(Ile2) agmatidine synthetase Length = 428 Score = 40.5 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 9/93 (9%) Query: 30 SNLSHVCVRGEISGYRGIHSSGHAYFSLKD-NHSRIDAIIWK--GTLNKIEFLPEEGIEF 86 ++ + G +S GH F+++D + ID ++ + G Sbjct: 267 RDMHSYRLEGTVSAAPKTLEGGHVIFAVRDREGAEIDCAAFEPTKNFRSLIRKLVPGDLI 326 Query: 87 LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + G +T S + IE + + Sbjct: 327 CLSGSVT----SGT--LNIEKIEIKSLAPVYRE 353 >gi|297517633|ref|ZP_06936019.1| exonuclease subunit SbcC [Escherichia coli OP50] Length = 553 Score = 40.5 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|293413649|ref|ZP_06656298.1| exonuclease subunit SbcC [Escherichia coli B185] gi|291433707|gb|EFF06680.1| exonuclease subunit SbcC [Escherichia coli B185] Length = 1047 Score = 40.5 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELHQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|21226547|ref|NP_632469.1| hypothetical protein MM_0445 [Methanosarcina mazei Go1] gi|20904819|gb|AAM30141.1| hypothetical protein MM_0445 [Methanosarcina mazei Go1] Length = 449 Score = 40.5 bits (93), Expect = 0.75, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 9/93 (9%) Query: 30 SNLSHVCVRGEISGYRGIHSSGHAYFSLKD-NHSRIDAIIWK--GTLNKIEFLPEEGIEF 86 ++ + G +S GH F+++D + ID ++ + G Sbjct: 288 RDMHSYRLEGTVSAAPKTLEGGHVIFAVRDREGAEIDCAAFEPTKNFRSLIRKLVPGDLI 347 Query: 87 LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTA 119 + G +T S + IE + + Sbjct: 348 CLSGSVT----SGT--LNIEKIEIKSLAPVYRE 374 >gi|307312228|ref|ZP_07591864.1| exonuclease SbcC [Escherichia coli W] gi|306907730|gb|EFN38232.1| exonuclease SbcC [Escherichia coli W] gi|315059674|gb|ADT74001.1| ATP-dependent dsDNA exonuclease [Escherichia coli W] gi|323379760|gb|ADX52028.1| exonuclease SbcC [Escherichia coli KO11] gi|324116880|gb|EGC10793.1| exonuclease SbcC [Escherichia coli E1167] Length = 1047 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 41/161 (25%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + RQ I E ++ + +H + ++ Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMVLRASIRHHAAKQSTELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|194438845|ref|ZP_03070930.1| nuclease SbcCD, C subunit [Escherichia coli 101-1] gi|253774618|ref|YP_003037449.1| exonuclease subunit SbcC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160464|ref|YP_003043572.1| exonuclease subunit SbcC [Escherichia coli B str. REL606] gi|300930312|ref|ZP_07145724.1| nuclease sbcCD, subunit C [Escherichia coli MS 187-1] gi|194422139|gb|EDX38141.1| nuclease SbcCD, C subunit [Escherichia coli 101-1] gi|242376175|emb|CAQ30866.1| ATP-dependent dsDNA exonuclease, subunit of SbcCD ATP-dependent dsDNA exonuclease [Escherichia coli BL21(DE3)] gi|253325662|gb|ACT30264.1| exonuclease SbcC [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972365|gb|ACT38036.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli B str. REL606] gi|253976574|gb|ACT42244.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BL21(DE3)] gi|300461772|gb|EFK25265.1| nuclease sbcCD, subunit C [Escherichia coli MS 187-1] gi|323972246|gb|EGB67456.1| exonuclease SbcC [Escherichia coli TA007] Length = 1048 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|323963382|gb|EGB58944.1| exonuclease SbcC [Escherichia coli H489] Length = 1048 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|320173787|gb|EFW48970.1| Exonuclease SbcC [Shigella dysenteriae CDC 74-1112] Length = 1047 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|312964583|ref|ZP_07778839.1| exonuclease sbcC [Escherichia coli 2362-75] gi|312290817|gb|EFR18694.1| exonuclease sbcC [Escherichia coli 2362-75] Length = 1047 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRTSIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|296478393|gb|DAA20508.1| coiled-coil domain-containing protein 157 [Bos taurus] Length = 623 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 3/198 (1%) Query: 257 DYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D P T A K+ L+ L + L +AL Sbjct: 209 DSMGHRPLPAATVGLWAAEQSKDLACLGKLVGLLRAQLEEAEGQKDRLRMQVGELEQALQ 268 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 ++ + E + ++ + ++ + Sbjct: 269 EEQAARQRQAQEAEQHRAQWERERQQLLAETSD-LKTKVATLEGELKQQRESTQAVESKA 327 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q E + ++++ +L + +I + T + K R++ ++ H+ Sbjct: 328 QQLQAEAEHRLEAERQVQHLEQQVELLAGRLDGASQQIRWASTELDKEKARVDSMVRHQ- 386 Query: 436 KSCHTSVSITTRILQSFA 453 +S + L S Sbjct: 387 ESLQAKQRALLQQLDSLD 404 >gi|134103770|ref|YP_001109431.1| single-strand DNA-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|291007703|ref|ZP_06565676.1| single-strand DNA-binding protein [Saccharopolyspora erythraea NRRL 2338] gi|133916393|emb|CAM06506.1| single-strand DNA-binding protein [Saccharopolyspora erythraea NRRL 2338] Length = 151 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 15/36 (41%), Gaps = 1/36 (2%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 KD + + IW+ + G+ +V G++ Sbjct: 40 KDGEALFLRCNIWRQAAENVAESLTRGMRVVVQGRL 75 >gi|82542886|ref|YP_406833.1| exonuclease subunit SbcC [Shigella boydii Sb227] gi|81244297|gb|ABB65005.1| ATP-dependent dsDNA exonuclease [Shigella boydii Sb227] gi|332098598|gb|EGJ03564.1| exonuclease sbcC [Shigella boydii 3594-74] Length = 1047 Score = 40.5 bits (93), Expect = 0.76, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|169235665|ref|YP_001688865.1| hypothetical protein OE2141F [Halobacterium salinarum R1] gi|167726731|emb|CAP13517.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 630 Score = 40.5 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 6/113 (5%) Query: 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 V + GE+ + G F ++D S I ++ + E G V G Sbjct: 120 DTVHIEGEVVQIKQTA--GPTVFRVRDETSAIPCTAFEDAGVRAHPGVEVGDIVHVSGDA 177 Query: 93 TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145 Q+ +++ G + L E+ + + P Sbjct: 178 D--DREGTTQLEVDAFEVLSGGDSADVARRLDAALAEQA--DPVDVDALVDWP 226 >gi|26246400|ref|NP_752439.1| exonuclease subunit SbcC [Escherichia coli CFT073] gi|300988104|ref|ZP_07178541.1| nuclease sbcCD, subunit C [Escherichia coli MS 45-1] gi|26106798|gb|AAN78983.1|AE016756_166 Exonuclease sbcC [Escherichia coli CFT073] gi|300407518|gb|EFJ91056.1| nuclease sbcCD, subunit C [Escherichia coli MS 45-1] gi|315294174|gb|EFU53525.1| nuclease sbcCD, subunit C [Escherichia coli MS 153-1] Length = 1047 Score = 40.5 bits (93), Expect = 0.77, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|297158763|gb|ADI08475.1| single-stranded DNA-binding protein [Streptomyces bingchenggensis BCW-1] Length = 196 Score = 40.5 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVDEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|215485478|ref|YP_002327909.1| exonuclease subunit SbcC [Escherichia coli O127:H6 str. E2348/69] gi|215263550|emb|CAS07880.1| exonuclease SbcC, dsDNA, ATP-dependent [Escherichia coli O127:H6 str. E2348/69] Length = 1047 Score = 40.5 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRTSIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|296193656|ref|XP_002744584.1| PREDICTED: serine/threonine-protein kinase 10 isoform 2 [Callithrix jacchus] Length = 968 Score = 40.5 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + L + + ++++ + L+K R+ L R Sbjct: 721 ICDKERECLMRKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRHELLRKHE 778 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + K+ + + + ++ + +Q Sbjct: 779 KELEQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 838 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + + CH V T+ Sbjct: 839 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNVSELQQLQNEKCHLLVEHETQK 898 Query: 449 LQSFA 453 L++ Sbjct: 899 LKALD 903 >gi|296193654|ref|XP_002744583.1| PREDICTED: serine/threonine-protein kinase 10 isoform 1 [Callithrix jacchus] Length = 968 Score = 40.5 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + L + + ++++ + L+K R+ L R Sbjct: 721 ICDKERECLMRKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRHELLRKHE 778 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + K+ + + + ++ + +Q Sbjct: 779 KELEQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 838 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + + CH V T+ Sbjct: 839 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNVSELQQLQNEKCHLLVEHETQK 898 Query: 449 LQSFA 453 L++ Sbjct: 899 LKALD 903 >gi|87125317|ref|ZP_01081163.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. RS9917] gi|86167086|gb|EAQ68347.1| putative chromosome segregation protein, SMC ATPase superfamily protein [Synechococcus sp. RS9917] Length = 1185 Score = 40.5 bits (93), Expect = 0.78, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 44/149 (29%), Gaps = 3/149 (2%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L+ + +++ + SR RL + H +E R R + N++ Sbjct: 353 QALDEAEQVCRDAEAAVEVSRRRLGDVAGRSGHWIEEQRQRSGRRLE-LQNQLTPLQREQ 411 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 R E++ Q ++ + L + + ++ L+ Sbjct: 412 QQLLERSLQDEERLSELQAELDSDGAEDRRVQDALEQLDREWQALLQDLQAGQQQVQALV 471 Query: 425 TRI--EFILSHKIKSCHTSVSITTRILQS 451 + + +++ + L S Sbjct: 472 DALAVQQRTRARLEQEQGRLEREIARLDS 500 >gi|306813137|ref|ZP_07447330.1| exonuclease subunit SbcC [Escherichia coli NC101] gi|305853900|gb|EFM54339.1| exonuclease subunit SbcC [Escherichia coli NC101] Length = 1047 Score = 40.5 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|296201331|ref|XP_002748010.1| PREDICTED: centrobin, partial [Callithrix jacchus] Length = 907 Score = 40.5 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 13/169 (7%), Positives = 51/169 (30%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 +E + + S +AL L R + +L+ + + + Sbjct: 303 EVEQQRCCALQEERDAARAGQLSEHRALEALQAALEEERQTWAQQELQLKEHYQALQLES 362 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 H + + + +++ +++ + R + +++++ Sbjct: 363 QAHLEREKEKGQREAQAAREAQHQLALVQSDMRRLEGELDTARRERDALQLEMSLVQARY 422 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 423 ESQRIQMESELAVQLEQQVTERLAQAQESSLRQAASLREQHRKQLQDLS 471 >gi|227884597|ref|ZP_04002402.1| exonuclease subunit SbcC [Escherichia coli 83972] gi|227838683|gb|EEJ49149.1| exonuclease subunit SbcC [Escherichia coli 83972] gi|307552301|gb|ADN45076.1| exonuclease SbcC [Escherichia coli ABU 83972] Length = 1047 Score = 40.5 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|157074178|ref|NP_001096803.1| coiled-coil domain-containing protein 157 [Bos taurus] gi|134025926|gb|AAI34592.1| LOC100125300 protein [Bos taurus] Length = 637 Score = 40.5 bits (93), Expect = 0.79, Method: Composition-based stats. Identities = 22/198 (11%), Positives = 54/198 (27%), Gaps = 3/198 (1%) Query: 257 DYAADLRAPTPTGAAEMAVPVKE-HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D P T A K+ L+ L + L +AL Sbjct: 209 DSMGHRPLPAATVGLWAAEQSKDLACLGKLVGLLRAQLEEAEGQKDRLRMQVGELEQALQ 268 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 ++ + E + ++ + ++ + Sbjct: 269 EEQAARQRQAQEAEQHRAQWERERQQLLAETSD-LKTKVATLEGELKQQRESTQAVESKA 327 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q E + ++++ +L + +I + T + K R++ ++ H+ Sbjct: 328 QQLQAEAEHRLEAERQVQHLEQQVELLAGRLDGASQQIRWASTELDKEKARVDSMVRHQ- 386 Query: 436 KSCHTSVSITTRILQSFA 453 +S + L S Sbjct: 387 ESLQAKQRALLQQLDSLD 404 >gi|281352120|gb|EFB27704.1| hypothetical protein PANDA_011044 [Ailuropoda melanoleuca] Length = 2755 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 17/205 (8%), Positives = 60/205 (29%), Gaps = 17/205 (8%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2430 DSHQMNASKGGEKEEGEDGQDLRRTESDGGLKKGGNANLVFMLKRNSEQVVQSVVHLHEL 2489 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ R + + + +++K RQ + Q+ Sbjct: 2490 LSTLQGVVLQQDSYIEDQKLLLAERALTRSSSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2549 Query: 381 EQIVKQHLRY---------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424 Q +++ R + E++ ++A + + + + ++ Sbjct: 2550 AQHLEEKRRREREWEARERVLQEREARLAQREQDVRRGQQDLEHERDELQLKKGAYQCDL 2609 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ +++ + L Sbjct: 2610 ERL-RAAQKQLEREQEQLRRDAERL 2633 >gi|301763908|ref|XP_002917361.1| PREDICTED: pleckstrin homology-like domain family B member 2-like [Ailuropoda melanoleuca] gi|281352112|gb|EFB27696.1| hypothetical protein PANDA_005585 [Ailuropoda melanoleuca] Length = 1247 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 62/188 (32%), Gaps = 10/188 (5%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 640 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQEIYSEQKTQLDNCPESMREQLQQ 699 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L + + E+++++ Q + + + + Sbjct: 700 QLKRDADLLDVESKHFE--DLEFQQLERESRLDEEKENLTQQLLREVAEYQRNIVTRKEK 757 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-----YKN 456 + L++Q + + + ++ ++ ++ + S + N Sbjct: 758 ISALKKQASHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLSGGKGFPVN 816 Query: 457 --TLKRGY 462 TLK GY Sbjct: 817 PSTLKEGY 824 >gi|218703678|ref|YP_002411197.1| exonuclease subunit SbcC [Escherichia coli UMN026] gi|293403514|ref|ZP_06647605.1| exonuclease subunit SbcC [Escherichia coli FVEC1412] gi|298379126|ref|ZP_06989007.1| exonuclease subunit SbcC [Escherichia coli FVEC1302] gi|300900457|ref|ZP_07118626.1| nuclease sbcCD, subunit C [Escherichia coli MS 198-1] gi|218430775|emb|CAR11649.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli UMN026] gi|291429367|gb|EFF02387.1| exonuclease subunit SbcC [Escherichia coli FVEC1412] gi|298280239|gb|EFI21743.1| exonuclease subunit SbcC [Escherichia coli FVEC1302] gi|300356048|gb|EFJ71918.1| nuclease sbcCD, subunit C [Escherichia coli MS 198-1] Length = 1047 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|195156401|ref|XP_002019088.1| GL26177 [Drosophila persimilis] gi|194115241|gb|EDW37284.1| GL26177 [Drosophila persimilis] Length = 672 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 8/203 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + A PV + + L+ I K+ L L + + Sbjct: 208 DQLGINSPNTSRSASPVLKMSTMRHVQLKCHRQEIRRSYNLDKLLLLQRLQRLQQQKLRH 267 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++ + RL E+ + + + S + H++ + +L +QQ I Sbjct: 268 MTEIGKEIARLSVHCVTRNELRLKPRTTSL----SGDHSHHIHHSMGRTLSVLLAEQQQI 323 Query: 381 EQIVKQHLRY---IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + + + K +L RE + R ++ L R + L K+ Sbjct: 324 APLALYNAQQLTKQIEGLRCKQRLLQAERETCQQRNEKATLRLEALAER-KEALQQKLHR 382 Query: 438 CHTSVSITTRILQSFAYKNTLKR 460 + LQ ++ +R Sbjct: 383 QRHHLEKERLELQLLQPQHLAQR 405 >gi|81908254|sp|O08815|SLK_RAT RecName: Full=STE20-like serine/threonine-protein kinase; Short=STE20-like kinase; AltName: Full=STE20-related serine/threonine-protein kinase; Short=STE20-related kinase gi|2114074|dbj|BAA20077.1| protein kinase [Rattus norvegicus] Length = 1206 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 883 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEEQEFVQKQQQELDGA 942 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 943 LKKIIQQQKAELANIERECLNNKQQLLRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 999 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + R Q R +++ R+ L ++ + Sbjct: 1000 FIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1039 >gi|157159914|ref|YP_001457232.1| exonuclease subunit SbcC [Escherichia coli HS] gi|170021231|ref|YP_001726185.1| exonuclease subunit SbcC [Escherichia coli ATCC 8739] gi|188491739|ref|ZP_02999009.1| exonuclease sbcC [Escherichia coli 53638] gi|193065209|ref|ZP_03046282.1| nuclease SbcCD, C subunit [Escherichia coli E22] gi|194428843|ref|ZP_03061378.1| nuclease SbcCD, C subunit [Escherichia coli B171] gi|209917608|ref|YP_002291692.1| exonuclease subunit SbcC [Escherichia coli SE11] gi|218552959|ref|YP_002385872.1| exonuclease subunit SbcC [Escherichia coli IAI1] gi|218693857|ref|YP_002401524.1| exonuclease subunit SbcC [Escherichia coli 55989] gi|260842595|ref|YP_003220373.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O103:H2 str. 12009] gi|312970490|ref|ZP_07784671.1| exonuclease sbcC [Escherichia coli 1827-70] gi|157065594|gb|ABV04849.1| nuclease SbcCD, C subunit [Escherichia coli HS] gi|169756159|gb|ACA78858.1| exonuclease SbcC [Escherichia coli ATCC 8739] gi|188486938|gb|EDU62041.1| exonuclease sbcC [Escherichia coli 53638] gi|192927183|gb|EDV81804.1| nuclease SbcCD, C subunit [Escherichia coli E22] gi|194413146|gb|EDX29433.1| nuclease SbcCD, C subunit [Escherichia coli B171] gi|209910867|dbj|BAG75941.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli SE11] gi|218350589|emb|CAU96279.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli 55989] gi|218359727|emb|CAQ97268.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli IAI1] gi|257757742|dbj|BAI29239.1| ATP-dependent dsDNA exonuclease SbcC [Escherichia coli O103:H2 str. 12009] gi|310337139|gb|EFQ02277.1| exonuclease sbcC [Escherichia coli 1827-70] gi|320201638|gb|EFW76214.1| Exonuclease SbcC [Escherichia coli EC4100B] gi|323160498|gb|EFZ46446.1| exonuclease sbcC [Escherichia coli E128010] gi|324016664|gb|EGB85883.1| nuclease sbcCD, subunit C [Escherichia coli MS 117-3] Length = 1047 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|328784641|ref|XP_395964.4| PREDICTED: LOW QUALITY PROTEIN: nucleoprotein TPR [Apis mellifera] Length = 2326 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 20/205 (9%), Positives = 58/205 (28%), Gaps = 4/205 (1%) Query: 250 ETDWTLADYAADLR--APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 E + T D A E + + + + + + Sbjct: 676 EENETKLKQVTDEYDTYKKERAAHERMLGDEVERLRKEAEANSARCCRLKAQLDSANDRF 735 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 N L + + + + + + + ++ K +++ + N++ Sbjct: 736 NLLQSNVTSYKSQIKVLEEKCFNYNVTIGKHEQSLMILKDEALAAQTRLSRAEVQLENLR 795 Query: 368 KNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + RQ + + + + E+ V Q R + + + E+ + T Sbjct: 796 QERQLLRDSEGRLLKEREVYQRERQTQALLRADVESIKASLERVQAEGQLRAEQRLDDAT 855 Query: 426 RIEFILSHKIKSCHTSVSITTRILQ 450 R L +++ + L+ Sbjct: 856 RECAALRRRLQEEQDRFRELSAHLE 880 >gi|149040345|gb|EDL94383.1| rCG57812, isoform CRA_b [Rattus norvegicus] Length = 1203 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 883 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEEQEFVQKQQQELDGA 942 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 943 LKKIIQQQKAELANIERECLNNKQQLLRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 999 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + R Q R +++ R+ L ++ + Sbjct: 1000 FIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1039 >gi|132626321|ref|NP_062222.2| STE20-like serine/threonine-protein kinase [Rattus norvegicus] Length = 1203 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 883 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEEQEFVQKQQQELDGA 942 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 943 LKKIIQQQKAELANIERECLNNKQQLLRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 999 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + R Q R +++ R+ L ++ + Sbjct: 1000 FIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1039 >gi|113954217|ref|YP_731649.1| chromosome segregation protein SMC [Synechococcus sp. CC9311] gi|113881568|gb|ABI46526.1| chromosome segregation protein SMC [Synechococcus sp. CC9311] Length = 1201 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 25/230 (10%), Positives = 71/230 (30%), Gaps = 17/230 (7%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 A ++ I+ + ++ ++ Q L +R+ L+R Sbjct: 887 AHQRWRDEQKELEERRQTLESQQQILQTKFGEERRARDAAEASVAELRQNLQQARWELER 946 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 L E ++ + + + + + + Q ++Q++K+ Sbjct: 947 LQEE-RLAIQEQLRSGGIRLEELKPTLPNPLPEIPEEIRHAGLEALQDQLQQLLKRMEAL 1005 Query: 391 --IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR- 447 + + E++ L R+ L ++L+ RIE + + + ++ + Sbjct: 1006 EPVNMLALEELTALEERLGDLGERLDVLSQEREELLLRIETVATLRQEAFMEAFQAVDGH 1065 Query: 448 -------------ILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 LQ + L+ G T + + + ++ + Sbjct: 1066 FSEIFASLSEGDGKLQLDNPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1115 >gi|193068718|ref|ZP_03049679.1| nuclease SbcCD, C subunit [Escherichia coli E110019] gi|192958081|gb|EDV88523.1| nuclease SbcCD, C subunit [Escherichia coli E110019] Length = 1047 Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAKFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|300820367|ref|ZP_07100519.1| nuclease sbcCD, subunit C [Escherichia coli MS 119-7] gi|331666743|ref|ZP_08367617.1| nuclease sbcCD, subunit C [Escherichia coli TA271] gi|331676062|ref|ZP_08376774.1| nuclease sbcCD, subunit C [Escherichia coli H591] gi|300527152|gb|EFK48221.1| nuclease sbcCD, subunit C [Escherichia coli MS 119-7] gi|331065967|gb|EGI37851.1| nuclease sbcCD, subunit C [Escherichia coli TA271] gi|331076120|gb|EGI47402.1| nuclease sbcCD, subunit C [Escherichia coli H591] Length = 1047 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|259046884|ref|ZP_05737285.1| DNA polymerase III, alpha subunit [Granulicatella adiacens ATCC 49175] gi|259036507|gb|EEW37762.1| DNA polymerase III, alpha subunit [Granulicatella adiacens ATCC 49175] Length = 1117 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 6/92 (6%) Query: 22 YHLKHIVESNLSHVCVRGEISGYR---GIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEF 78 ++ + E G I R AY +L+D ID +++ TL +I Sbjct: 942 QAIQSVFEEGYMRF--VGLIVDIRKISTRKGEKMAYVTLQDASGMIDVVVFPSTLAEIYQ 999 Query: 79 LPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 ++ L+ G++ ++Q+ + + P Sbjct: 1000 HLQQNTMVLMEGRVKR-GQKGQWQLQLNRMYP 1030 >gi|218134790|ref|ZP_03463594.1| hypothetical protein BACPEC_02693 [Bacteroides pectinophilus ATCC 43243] gi|217990175|gb|EEC56186.1| hypothetical protein BACPEC_02693 [Bacteroides pectinophilus ATCC 43243] Length = 90 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 5/43 (11%), Positives = 14/43 (32%) Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKK 511 N+ + ++ I I F + V + ++ + Sbjct: 38 NDKVVKASYDVKEGDVIEIQFGNKSVKVRVTDIRDTTKKKKPR 80 >gi|166365792|ref|YP_001658065.1| serine protease [Microcystis aeruginosa NIES-843] gi|166088165|dbj|BAG02873.1| serine protease [Microcystis aeruginosa NIES-843] Length = 426 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 26/69 (37%), Gaps = 3/69 (4%) Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHNNKR 519 G+ I + + IT + ++ + DG+ + V+ P + + + N R Sbjct: 146 GF-IISN-DGKIITNAHVVEGADKVTVTLKDGRTIDGKVLGSDPLTDVAVVQVEASNLPR 203 Query: 520 EKQGTQGEL 528 K G L Sbjct: 204 VKLGNSDSL 212 >gi|327398212|ref|YP_004339081.1| metal dependent phosphohydrolase [Hippea maritima DSM 10411] gi|327180841|gb|AEA33022.1| metal dependent phosphohydrolase [Hippea maritima DSM 10411] Length = 319 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 37 VRGE---ISG-YRGIHSSGHAY--FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90 + GE +S + +G Y LKD IDA IW L ++ E G + G Sbjct: 16 IEGEAFLVSEKHILKARNGDEYVGLKLKDRTGIIDAKIW-NNLLHLKDRFEAGDFVKIRG 74 Query: 91 KITTFPGSSKYQIIIESLI 109 + + +Q+II+ L Sbjct: 75 ESNYYND--NWQVIIKDLE 91 >gi|317180229|dbj|BAJ58015.1| outer membrane protein HopK [Helicobacter pylori F32] gi|317180650|dbj|BAJ58436.1| outer membrane protein HopK [Helicobacter pylori F32] Length = 368 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 22/166 (13%), Positives = 56/166 (33%), Gaps = 15/166 (9%) Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEII---IFRKYRHFNHIINRIKSDFLIHNIQ 367 A+ +++ L+ R + + + L + I F +I N +K+ + + Sbjct: 38 SHAIQHNNPFLNQERIKTISNAQNKIYKLNQVKNEITSMPNTFAYINNNLKNHSQLTPTE 97 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + Q ++ I K + + ++A ++ L ++K L + Sbjct: 98 MQAEKYY-LQSTLQNIEKIVMLSGGVASNPQLAQALEKMQEPITNPLELAENLKNLEAQF 156 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKN-----------TLKRGY 462 + + S + ++ + L + + TL GY Sbjct: 157 AQSQNRMLSSLSSQIAQISNSLNALDPSSYSKNISNMYGVTLNVGY 202 >gi|301773364|ref|XP_002922103.1| PREDICTED: a-kinase anchor protein 13-like [Ailuropoda melanoleuca] Length = 2782 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 17/205 (8%), Positives = 60/205 (29%), Gaps = 17/205 (8%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2441 DSHQMNASKGGEKEEGEDGQDLRRTESDGGLKKGGNANLVFMLKRNSEQVVQSVVHLHEL 2500 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ R + + + +++K RQ + Q+ Sbjct: 2501 LSTLQGVVLQQDSYIEDQKLLLAERALTRSSSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2560 Query: 381 EQIVKQHLRY---------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424 Q +++ R + E++ ++A + + + + ++ Sbjct: 2561 AQHLEEKRRREREWEARERVLQEREARLAQREQDVRRGQQDLEHERDELQLKKGAYQCDL 2620 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ +++ + L Sbjct: 2621 ERL-RAAQKQLEREQEQLRRDAERL 2644 >gi|124028238|ref|YP_001013558.1| hypothetical protein Hbut_1389 [Hyperthermus butylicus DSM 5456] gi|123978932|gb|ABM81213.1| hypothetical protein Hbut_1389 [Hyperthermus butylicus DSM 5456] Length = 835 Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats. Identities = 18/204 (8%), Positives = 53/204 (25%), Gaps = 22/204 (10%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + DY R + ++ +E I + N + + Sbjct: 568 IIDYDVVARFAFSLLQLAWNEGIHDNTNPLDEYMEIMWYYIWHHEGRRWRNGVFMMGPDF 627 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL--IHNIQKNRQH 372 + + +L R+ L +++ + I + ++ Sbjct: 628 AHWFGIVDTVLDKLGRMTNYLYIAMKVRLLETELQALKQAAAGAPYTPELAAQIAELQKE 687 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + +Q + + K +I L + + L T + L+ Sbjct: 688 LETLKQQLAAL-----EAQVPALKSQIQSLEAGYSSVEGELGTLKTDVSTLL-------- 734 Query: 433 HKIKSCHTSVSITTRILQSFAYKN 456 + ++ L++ + + Sbjct: 735 -------QQLDELSKQLEALSPQA 751 >gi|329938667|ref|ZP_08288063.1| single-strand DNA-binding protein [Streptomyces griseoaurantiacus M045] gi|329302158|gb|EGG46050.1| single-strand DNA-binding protein [Streptomyces griseoaurantiacus M045] Length = 200 Score = 40.1 bits (92), Expect = 0.83, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVDEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|149040344|gb|EDL94382.1| rCG57812, isoform CRA_a [Rattus norvegicus] Length = 1234 Score = 40.1 bits (92), Expect = 0.83, Method: Composition-based stats. Identities = 18/181 (9%), Positives = 53/181 (29%), Gaps = 10/181 (5%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL--SCSRYRLD 329 + L+ ++ + + N ++ + + + L + R + Sbjct: 890 RLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLRNRKKEVINEVEKAPKELRKELMKRRKE 949 Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 L + + + ++ + + + +I R+ + KQQ + Sbjct: 950 ELAQSQHAQEQEFVQKQQQELDGALKKIIQQQKAELANIERECLNNKQQLLRAREAAIWE 1009 Query: 390 YIFLEKKEKIAIL--------HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +EK +L + R Q R +++ R+ L ++ Sbjct: 1010 LEERHLQEKHQLLKQQLKDQYFIQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERAR 1069 Query: 442 V 442 + Sbjct: 1070 L 1070 >gi|254416225|ref|ZP_05029979.1| hypothetical protein MC7420_5061 [Microcoleus chthonoplastes PCC 7420] gi|196176907|gb|EDX71917.1| hypothetical protein MC7420_5061 [Microcoleus chthonoplastes PCC 7420] Length = 687 Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 18/193 (9%), Positives = 46/193 (23%), Gaps = 5/193 (2%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS----DQTLSCS 324 A E + L+ + I L + + + +Q L Sbjct: 62 TAIAQVYQNLEPIHEQFSQLDIQTQERISHLKDVNAQQYKAAIAKIHQLIEPLNQQLIQL 121 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R + + H +I+ ++ L + +Q + Q ++Q+ Sbjct: 122 DSRSQDQLEQFNSANQQQHAEIIAHIYQLIHPLQL-HLTQLDETTQQRDRQTQTQLDQLH 180 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 ++ L ++ + + I + Sbjct: 181 ALQHLQAEGILAYINPLIDTLNQELIRLDSQTQQRFAEFSVANQQQHDAIILQVQQQLEP 240 Query: 445 TTRILQSFAYKNT 457 L + + T Sbjct: 241 FKTQLDTLTPQVT 253 >gi|332221013|ref|XP_003259652.1| PREDICTED: liprin-alpha-2 isoform 2 [Nomascus leucogenys] Length = 1232 Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 93/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + + + A ++I+ Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVCALEEELAAANQEIV--ALRE 203 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 204 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 263 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 264 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 322 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 323 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 382 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 383 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 425 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 426 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 479 >gi|324010123|gb|EGB79342.1| nuclease sbcCD, subunit C [Escherichia coli MS 57-2] Length = 1047 Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 40/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEDEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|296216282|ref|XP_002754499.1| PREDICTED: centrosomal protein of 164 kDa [Callithrix jacchus] Length = 1455 Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + S + Sbjct: 786 AKHQEVVSSLQKKIEEAQQKEETQLQKCLGQVEHRVHQKAYHMIEYEQELSSLL----RE 841 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A LR + + +++ R Sbjct: 842 KRQEVEEEHERRLDKMKEEHHQVMAKAREQYEAEERKLRAELLGHLTGELERLQRAHERE 901 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + ++++ R L Sbjct: 902 LETVRQDQHNRLEDLRRRHREQERKLHDL 930 >gi|154252903|ref|YP_001413727.1| protease Do [Parvibaculum lavamentivorans DS-1] gi|154156853|gb|ABS64070.1| protease Do [Parvibaculum lavamentivorans DS-1] Length = 487 Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 21/68 (30%), Gaps = 5/68 (7%) Query: 442 VSITTRILQSFAYKNT--LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIV 498 +S + L G+ D + IT + RI + F DG A V Sbjct: 83 FEEFLEQQESMRPQRVQSLGSGFVI--DPDGIVITNNHVIEGADRIEVTFTDGTTLPATV 140 Query: 499 INKAPPKE 506 P + Sbjct: 141 AGTDPKTD 148 >gi|332221015|ref|XP_003259653.1| PREDICTED: liprin-alpha-2 isoform 3 [Nomascus leucogenys] Length = 1257 Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 93/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + + + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVCALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|331661769|ref|ZP_08362692.1| exonuclease SbcC [Escherichia coli TA143] gi|331060191|gb|EGI32155.1| exonuclease SbcC [Escherichia coli TA143] Length = 1047 Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|332221011|ref|XP_003259651.1| PREDICTED: liprin-alpha-2 isoform 1 [Nomascus leucogenys] Length = 1156 Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 93/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + + + A ++I+ Sbjct: 90 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVCALEEELAAANQEIV--ALRE 147 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 148 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 207 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 208 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 266 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 267 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 326 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 327 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 369 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 370 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 423 >gi|126306346|ref|XP_001367142.1| PREDICTED: similar to translocated promoter region (to activated MET oncogene), [Monodelphis domestica] Length = 2364 Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 87/256 (33%), Gaps = 21/256 (8%) Query: 247 IGHETDWTLADYAADLRAPTPTGAAEM--------AVPVKEHLQSSLINLEARLNNIIIR 298 I +E L + DLR+ + ++ + I N + Sbjct: 693 IQNEQSEKLQEQITDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTA 752 Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + + +N++ + L +++ L+ + R + L +E E + + + + + Sbjct: 753 TTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRG 812 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + L+ N+Q + + + +Q + + + E + L EQ Sbjct: 813 QNLLLTNLQTIQGILERSETETKQRLNNQIEKLEREIAQLKKKLENEVEQRHTLTRNQDV 872 Query: 419 HIKKLITRIEFILSHKIKSC-------------HTSVSITTRILQSFAYKNTLKRGYTSI 465 + ++E ++ + + +S L S + + L +G ++ Sbjct: 873 QLLDTKRQLETEINRHLNTKELLKNAQKEIVTLKQQLSNIEAQLASQSAQRALGKGQSTT 932 Query: 466 QDTNNNFITQKRNLAT 481 ++ ++ I+Q R Sbjct: 933 KEDIDDLISQLRQAEE 948 >gi|331671944|ref|ZP_08372740.1| ATP-dependent dsDNA exonuclease [Escherichia coli TA280] gi|331070933|gb|EGI42292.1| ATP-dependent dsDNA exonuclease [Escherichia coli TA280] Length = 1047 Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|194224685|ref|XP_001494184.2| PREDICTED: similar to Zinc finger protein 367 [Equus caballus] Length = 389 Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats. Identities = 24/277 (8%), Positives = 68/277 (24%), Gaps = 15/277 (5%) Query: 184 DECPKEIANAILQLNTLKEGRTCPRP--DIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 L C R + ++ G++ + + + + Sbjct: 113 RGIAPVCVMCELTGTLRNPRSHCLRGIAPVCVMCELTGTLRNPRSYCLRAVAPVCVMCEL 172 Query: 242 PIISAI--GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL 299 I + G AD DL ++ + + + +L+A Sbjct: 173 TNIKLMQDGIRRGRPRADTVRDLINEGEHSSSRIRCNICNRVFPREKSLQAHKRTHTGER 232 Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL--EHNLEIIIFRKYRHFNHIINRI 357 + KA S Q + R P L H R+ Sbjct: 233 --PYLCDYPDCGKAFVQSGQLKTHQRLHTGEKPFVCSENGCLSRFTHANRHCPKHPYARL 290 Query: 358 KSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 K + + K++ + + + + + + K + + ++ + Sbjct: 291 KREEPTDALSKHQAVDNQAAAEWLAKYWETREQRTPSLKGKLVQKADQEQQDPLEYLQSD 350 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + + +++ + +++ Sbjct: 351 EEDDE------KSGAQRRLQEQRERLHGALALIELAN 381 >gi|77165172|ref|YP_343697.1| chromosome segregation protein SMC [Nitrosococcus oceani ATCC 19707] gi|254434247|ref|ZP_05047755.1| chromosome segregation protein SMC [Nitrosococcus oceani AFC27] gi|76883486|gb|ABA58167.1| condensin subunit Smc [Nitrosococcus oceani ATCC 19707] gi|207090580|gb|EDZ67851.1| chromosome segregation protein SMC [Nitrosococcus oceani AFC27] Length = 1170 Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 15/177 (8%), Positives = 45/177 (25%), Gaps = 2/177 (1%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + ++ L + ++ L + ++ E Sbjct: 716 CQSALARVEAKQEQHQLRQRQVQEELEEIQTHLAEDERERQLAETCLQEALMDMESFAEE 775 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 E ++ + + +H ++ + + +Q V Q R Sbjct: 776 REQLIKQRDRLRASLNQLRGETGAAKDNLHRLEMEGHSLQTTLEATQQAVIQIRREYNEL 835 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + A+ L L R+ + ++ V+ L++ Sbjct: 836 LQRREALEVTLASGETPLQELQTQLETHLQQRM--SIERQLNEARERVTRLESQLRT 890 >gi|39970965|ref|XP_366873.1| hypothetical protein MGG_02949 [Magnaporthe oryzae 70-15] gi|149210495|ref|XP_001522622.1| hypothetical protein MGCH7_ch7g722 [Magnaporthe oryzae 70-15] gi|86196677|gb|EAQ71315.1| hypothetical protein MGCH7_ch7g722 [Magnaporthe oryzae 70-15] gi|145017219|gb|EDK01582.1| hypothetical protein MGG_02949 [Magnaporthe oryzae 70-15] Length = 1043 Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats. Identities = 19/195 (9%), Positives = 58/195 (29%), Gaps = 10/195 (5%) Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 R PTP + P + S E + + L + Sbjct: 284 RQPTPPPQPKNEEPGVINDFWSNQLEEQNREYEAQQRALEERQRQQMLAQEQAQMLAQQQ 343 Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 + + ++ + ++ + + ++ + L Q + ++ +Q Sbjct: 344 FEQQQRALAEQQQREHQALLEQQARMATQGRLAELEQENLRARAQYEQDQLMLQQ----- 398 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 Q ++ + E + + L ++I L + ++ E + + H + Sbjct: 399 -YDQRVKALEGELQHIQSSLGQQMNSKDDQIRALQEQLNTWRSKYEALAKLYSQLRHEHL 457 Query: 443 SITTR----ILQSFA 453 + + L++ + Sbjct: 458 DLLQKFKSVQLKAAS 472 >gi|284920203|emb|CBG33262.1| exonuclease SbcC [Escherichia coli 042] Length = 1047 Score = 40.1 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|218688259|ref|YP_002396471.1| exonuclease subunit SbcC [Escherichia coli ED1a] gi|218425823|emb|CAR06629.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli ED1a] Length = 1047 Score = 40.1 bits (92), Expect = 0.89, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTTLAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|222032192|emb|CAP74931.1| exonuclease sbcC [Escherichia coli LF82] gi|312944974|gb|ADR25801.1| exonuclease subunit SbcC [Escherichia coli O83:H1 str. NRG 857C] Length = 1047 Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|195388716|ref|XP_002053025.1| GJ23654 [Drosophila virilis] gi|194151111|gb|EDW66545.1| GJ23654 [Drosophila virilis] Length = 1981 Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 34/354 (9%), Positives = 98/354 (27%), Gaps = 31/354 (8%) Query: 113 SGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL 172 G L A + + + + + + ++ SP +LQ R L Sbjct: 963 LGALHDADFQLSGDISAADIVDGYREKTLSLLWQLCYKFRSPKFHAAARVLQVWWRRRWL 1022 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIIL----ARGGGSIEDLWHFN 228 V I + + Q+ + R +I+ R + + L+ Sbjct: 1023 HVFIRRRIRERAAIRIQAVFRGHQMRKYAKLYRVERLRAVIVLQKYTRRYLAQKHLYQVY 1082 Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 ++ +I + H+ + +A + S L Sbjct: 1083 QSIV-------TIQLWWRANHQG------RLCRQQFLHLRESAIFLQRIWRRRLFSRKLL 1129 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 A + R K N + ++ S + R R + + + + Sbjct: 1130 AAATTARLQR--DQKHNAAAACIQMCWRSYRLAKKQRETYIRERQLIIFVQRSVRNKWLM 1187 Query: 349 HFNHIINRIKSDF---LIHNIQKNRQHILEKQQHIEQI-----VKQHLRYIFLEKKEKIA 400 ++ L + + + ++ ++ ++ +++ R ++++ Sbjct: 1188 QHTRDQFQLLRQSALVLQRRYRARLKMLRTRRNYLHELQCIIDIQRRWRATLEMRRQRAY 1247 Query: 401 ILHM----LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + Q + R ++ R++ + +++ T Sbjct: 1248 YRKLKACTILLQIQYRARLQMRQQQQRFLRLKAATLVLQQRYRARLNMLTARRN 1301 >gi|126321136|ref|XP_001368990.1| PREDICTED: similar to dystrobrevin, alpha, isoform 1 [Monodelphis domestica] Length = 743 Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 46/155 (29%), Gaps = 10/155 (6%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 N + L + + + + F I ++ RQ I Sbjct: 418 SNPSRMLDSPNRLDEEHRLIARYAARLAAETSSTQPSQQRGPSDISFTIDANKQQRQLIA 477 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432 E + +I+++ R ++ ++ + L +L R+ + Sbjct: 478 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 537 Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 538 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|110640658|ref|YP_668386.1| exonuclease subunit SbcC [Escherichia coli 536] gi|191173503|ref|ZP_03035030.1| nuclease SbcCD, C subunit [Escherichia coli F11] gi|300997417|ref|ZP_07181757.1| nuclease sbcCD, subunit C [Escherichia coli MS 200-1] gi|110342250|gb|ABG68487.1| exonuclease SbcC [Escherichia coli 536] gi|190906212|gb|EDV65824.1| nuclease SbcCD, C subunit [Escherichia coli F11] gi|300304236|gb|EFJ58756.1| nuclease sbcCD, subunit C [Escherichia coli MS 200-1] gi|324010707|gb|EGB79926.1| nuclease sbcCD, subunit C [Escherichia coli MS 60-1] Length = 1047 Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|323191313|gb|EFZ76576.1| exonuclease sbcC [Escherichia coli RN587/1] Length = 1047 Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|320197168|gb|EFW71785.1| Exonuclease SbcC [Escherichia coli WV_060327] Length = 1047 Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTTLAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|254414789|ref|ZP_05028553.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] gi|196178278|gb|EDX73278.1| RecF/RecN/SMC N terminal domain, putative [Microcoleus chthonoplastes PCC 7420] Length = 1006 Score = 40.1 bits (92), Expect = 0.90, Method: Composition-based stats. Identities = 20/201 (9%), Positives = 55/201 (27%), Gaps = 13/201 (6%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 + ++ + H + R I ++ L + + P L Sbjct: 615 SQLQQLNYNEQTHALARGEVDRWRWAEIRQAKLEDAQRRLEKIQEQKPQLQAQLDQLNQS 674 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L+ L L+ + I + + + ++ Q + Q + + + + Sbjct: 675 LEELQTTSP--LKQQLDAIESQITEIGYNLDTHNQLRTALRHAQSWQLRHQELTKAQEHY 732 Query: 388 LR--YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL--ITRIEFILSHKIKSCHTSVS 443 + + +A RE ++ + +++ +R L +I + Sbjct: 733 PQLCQRLDSLTQTLAQRQGDRETLNTQLAEIVKQLEQYPDTSRDIQSLEQRILQRRRQLD 792 Query: 444 -------ITTRILQSFAYKNT 457 + L T Sbjct: 793 EHLSQIGRLQQRLTQLDTLKT 813 >gi|195118064|ref|XP_002003560.1| GI17983 [Drosophila mojavensis] gi|193914135|gb|EDW13002.1| GI17983 [Drosophila mojavensis] Length = 2091 Score = 40.1 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 12/192 (6%), Positives = 54/192 (28%), Gaps = 3/192 (1%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + T + + ++ + + + + Sbjct: 1378 DSHSTTTMQPSTANIVANYPRLKRYMDDGYLNYERLSKYFEANSEWQKEMDCQTLGLTIV 1437 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + +++ L +I + + + L + + ++QQ Sbjct: 1438 IQFMSKQMEMLSCRESKA-KISLEETMALLQQTQH--SCEELRQQLHEKDVEWSQRQQEW 1494 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 E + + L+ + +E + + + ++ K+ + ++H+++ Sbjct: 1495 EHLQLRELQQAHEKVQEVQLLAKERFRELEAQLVAKDEEKKQALQTYHQEIAHQLRHKQQ 1554 Query: 441 SVSITTRILQSF 452 ++ + + Sbjct: 1555 QLTAAEQQVLQL 1566 >gi|21222314|ref|NP_628093.1| single-stranded DNA-binding protein [Streptomyces coelicolor A3(2)] gi|37999820|sp|Q9X8U3|SSB2_STRCO RecName: Full=Single-stranded DNA-binding protein 2; Short=SSB 2; AltName: Full=Helix-destabilizing protein 2 gi|257471775|pdb|3EIV|A Chain A, Crystal Structure Of Single-Stranded Dna-Binding Protein From Streptomyces Coelicolor gi|257471776|pdb|3EIV|B Chain B, Crystal Structure Of Single-Stranded Dna-Binding Protein From Streptomyces Coelicolor gi|257471777|pdb|3EIV|C Chain C, Crystal Structure Of Single-Stranded Dna-Binding Protein From Streptomyces Coelicolor gi|257471778|pdb|3EIV|D Chain D, Crystal Structure Of Single-Stranded Dna-Binding Protein From Streptomyces Coelicolor gi|4808403|emb|CAB42735.1| putative single-strand DNA-binding protein [Streptomyces coelicolor A3(2)] Length = 199 Score = 40.1 bits (92), Expect = 0.91, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVDEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|193785708|dbj|BAG51143.1| unnamed protein product [Homo sapiens] Length = 551 Score = 40.1 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 56/192 (29%), Gaps = 7/192 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 T + L + + ++++ + L+K R+ Sbjct: 297 TTDNRREICDKERECLMKKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRH 354 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE----- 381 L R + ++ R + K+ + + + ++ + Sbjct: 355 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 414 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +Q + ++E+ +Q + + + + + + + + + CH Sbjct: 415 SAAEQREKIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNMSELQQLQNEKCHLL 474 Query: 442 VSITTRILQSFA 453 V T+ L++ Sbjct: 475 VEHETQKLKALD 486 >gi|187917992|ref|YP_001883555.1| single-strand DNA binding protein [Borrelia hermsii DAH] gi|119860840|gb|AAX16635.1| single-strand DNA binding protein [Borrelia hermsii DAH] Length = 145 Score = 40.1 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 22/58 (37%), Gaps = 10/58 (17%) Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFP---------GSSKYQIIIESLIPSGS 113 D +I+ + ++G + +V G + + SK ++++ + G Sbjct: 53 DCVIFAKRAESLSVFLKKGKQVVVSGSLK-YESWQDKNTGDKRSKCSVLVDEIQMFGM 109 >gi|145497947|ref|XP_001434962.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124402090|emb|CAK67565.1| unnamed protein product [Paramecium tetraurelia] Length = 1170 Score = 40.1 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 15/176 (8%), Positives = 53/176 (30%), Gaps = 6/176 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL--SCSRYRLDRLPR 333 +E LQ+ + ++ + + K + + ++ L + + + Sbjct: 814 QEEEALQNLEYQIFSKFQQQMEQRTKQENQRKIQSQLEFRSKEKELLDQIKQEQWKMDSQ 873 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + + +E + + + + N + + + + + + K +E+ + Sbjct: 874 QQQIKVEQLKQLRMQQLQELENEAQIEEVEYQERIHSFQQDLKMIQLER----EKKLRDQ 929 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 E+I+ K + + E + K + + + L Sbjct: 930 MFSEQISKEEQQLRDKKQVEDKKRQSSVQRRQQFEQEMERMAKQHQEKLRMQEQQL 985 >gi|14601261|ref|NP_147796.1| surface layer protein [Aeropyrum pernix K1] gi|5104891|dbj|BAA80205.1| surface layer protein [Aeropyrum pernix K1] Length = 533 Score = 40.1 bits (92), Expect = 0.92, Method: Composition-based stats. Identities = 11/114 (9%), Positives = 35/114 (30%), Gaps = 8/114 (7%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L + + + ++ L ++ + + + Q + Sbjct: 312 LSGAVDAMSQQLQALAEDLE--SLSSRVEDLEARVGSVEDRLSQAEEDIDSLTTS----- 364 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + L E R+ ++ L TR++ ++ ++ ++ LQ+ Sbjct: 365 LDSLRTELEDLSTRLAEAQASLEDLNTRLDQ-VASTLQQLQQRLATAEESLQAL 417 >gi|331645567|ref|ZP_08346671.1| exonuclease SbcC [Escherichia coli M605] gi|331045729|gb|EGI17855.1| exonuclease SbcC [Escherichia coli M605] Length = 1047 Score = 40.1 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 H-----NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 ITEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|269958122|ref|YP_003327911.1| single-strand binding protein [Xylanimonas cellulosilytica DSM 15894] gi|269306803|gb|ACZ32353.1| single-strand binding protein [Xylanimonas cellulosilytica DSM 15894] Length = 189 Score = 40.1 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 7/37 (18%), Positives = 17/37 (45%), Gaps = 1/37 (2%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKIT 93 KD + + +W+ + +G+ +V G++T Sbjct: 48 KDGDALFMRCSVWREAAENVAESLTKGMRVIVQGRLT 84 >gi|148269803|ref|YP_001244263.1| metal dependent phosphohydrolase [Thermotoga petrophila RKU-1] gi|147735347|gb|ABQ46687.1| metal dependent phosphohydrolase [Thermotoga petrophila RKU-1] Length = 336 Score = 40.1 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 +L+D + A+ W + +EG V G++ F QI +++ Sbjct: 52 MTLEDRTGTVRAVDW-YNAELNDQRLKEGTVVRVKGRVVFFENR--IQINVDN 101 >gi|257898652|ref|ZP_05678305.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium Com15] gi|257836564|gb|EEV61638.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium Com15] Length = 744 Score = 40.1 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 8/133 (6%) Query: 52 HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FPGSSKYQIIIESLI 109 H F L D S++DA+ + E + V+GK++ + G K Q+++ Sbjct: 480 HLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWNGRKKPQLMVSDFA 536 Query: 110 PSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRIS 167 G + + + E+ L+ + + F+P+ I T+ + I I Sbjct: 537 VGGLQVFDWRAKRFREQSRTYEDSLYLAFDSSTLKFVPERIQE-TAIVFEGMDSIHAVIE 595 Query: 168 CRFPLRVIIFPVK 180 R P ++I Sbjct: 596 KRKPKSLVIMDCP 608 >gi|257896024|ref|ZP_05675677.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium Com12] gi|257832589|gb|EEV59010.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium Com12] Length = 765 Score = 40.1 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%) Query: 40 EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96 +++ + I ++ H F L D S++DA+ + E + V+GK++ + Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544 Query: 97 GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154 G K Q+++ G + + + E+ L+ + + F+P+ I T+ Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPERIQE-TAI 603 Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180 + I I R P ++I Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629 >gi|227551359|ref|ZP_03981408.1| recombination protein J [Enterococcus faecium TX1330] gi|227179478|gb|EEI60450.1| recombination protein J [Enterococcus faecium TX1330] Length = 765 Score = 40.1 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%) Query: 40 EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96 +++ + I ++ H F L D S++DA+ + E + V+GK++ + Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544 Query: 97 GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154 G K Q+++ G + + + E+ L+ + + F+P+ I T+ Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPERIQE-TAI 603 Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180 + I I R P ++I Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629 >gi|124027865|ref|YP_001013185.1| hypothetical protein Hbut_0993 [Hyperthermus butylicus DSM 5456] gi|123978559|gb|ABM80840.1| universally conserved protein [Hyperthermus butylicus DSM 5456] Length = 448 Score = 40.1 bits (92), Expect = 0.93, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 43/123 (34%), Gaps = 3/123 (2%) Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 +E+ L+ + + + + L ++ + + + I++ Sbjct: 292 QLQEMLGELQSQLSSLAQQLGELSKGLS--VLAQDLNAKIEKLNSEITKIKEAYATKDEL 349 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + + + +I L+ I KL R++ + S I+ ++ T LQ Sbjct: 350 NTAINNVN-SRIDQEKASLEQQISALNEEINKLKQRLDQLESATIQQLSNNIQQLTSELQ 408 Query: 451 SFA 453 S + Sbjct: 409 SLS 411 >gi|330910189|gb|EGH38699.1| exonuclease SbcC [Escherichia coli AA86] Length = 1047 Score = 40.1 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|321470448|gb|EFX81424.1| hypothetical protein DAPPUDRAFT_317679 [Daphnia pulex] Length = 1734 Score = 40.1 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 21/221 (9%), Positives = 69/221 (31%), Gaps = 32/221 (14%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLE-----ARLNNIIIRLIKYKINTLNSLLKALPN 316 +P PT +M PV + + + + + + + Sbjct: 474 ATSPPPTDDMKMMSPVSFEDKRKENFDKGQAELDKRRKALAEQQRREQEERERKEREEYE 533 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 + L + R + E + + I ++ + ++ + + Sbjct: 534 RKEKLRLEQERRQQAELEKKLAKQREIE--MEKEEQRRKMLEQREAARKEMERQRQLEWQ 591 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--------- 427 +Q ++++++Q + +EK+A+L ++ + + L + +L ++I Sbjct: 592 KQRLQELLQQRQKE-----QEKVALLRANHQRLQTELSVLDDRVMELSSKIIETRTGVAE 646 Query: 428 -----------EFILSHKIKSCHTSVSITTRILQSFAYKNT 457 ++ + T + + L + + + Sbjct: 647 TKNTIDGMRTTRDTQMAQLSTLKTQLREQNQRLLTVSQEKV 687 >gi|315299627|gb|EFU58875.1| nuclease sbcCD, subunit C [Escherichia coli MS 16-3] Length = 1047 Score = 40.1 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|73955594|ref|XP_546602.2| PREDICTED: similar to LYST-interacting protein LIP8 isoform 1 [Canis familiaris] Length = 903 Score = 40.1 bits (92), Expect = 0.94, Method: Composition-based stats. Identities = 13/169 (7%), Positives = 46/169 (27%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 LE + + S + L L R + R++E + Sbjct: 322 ELEQQRCRSLQEERDEARAGQLSEHRQLETLKLALEEERQAWVQQERQMEGRYGALQEEV 381 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + + +++ + + R + +++++ Sbjct: 382 QAQLEKEKENTQREAQAAREAQKQLVLVQSEVRRLEGELDTARRERDALQLEMSLVQARY 441 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ Sbjct: 442 ESQRIQMESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLN 490 >gi|327285129|ref|XP_003227287.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like [Anolis carolinensis] Length = 1200 Score = 40.1 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 7/148 (4%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 D L SR ++RL E+ + R+ +S ++ ++ Q Sbjct: 219 DHVLEGSRAEMERLSHHSLVLAELGLDRESTSPLGKATDPESTHYQQRHEEVQERRAAIQ 278 Query: 378 Q-----HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 ++++++ + L K + + + L + + L+ ++E L+ Sbjct: 279 DNVELIRLQKLLRTKNSELVLTKAQFAGLQEAYETHLQQNQDALRSTSEALLAQVEE-LN 337 Query: 433 HKIKSCHTSVSITTRILQSFAYKN-TLK 459 +K V+ L+ + TLK Sbjct: 338 AHLKEETQKVTALESQLEILSPLQGTLK 365 >gi|293378804|ref|ZP_06624961.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium PC4.1] gi|292642597|gb|EFF60750.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium PC4.1] Length = 765 Score = 40.1 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%) Query: 40 EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96 +++ + I ++ H F L D S++DA+ + E + V+GK++ + Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544 Query: 97 GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154 G K Q+++ G + + + E+ L+ + + F+P+ I T+ Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPERIQE-TAI 603 Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180 + I I R P ++I Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629 >gi|281347972|gb|EFB23556.1| hypothetical protein PANDA_019624 [Ailuropoda melanoleuca] Length = 1900 Score = 40.1 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 29/231 (12%), Positives = 67/231 (29%), Gaps = 23/231 (9%) Query: 227 FNDEMIVRAIANSSIPIISAI-----GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281 F D + A +++ S + GH D P E + Sbjct: 286 FADFEMGWAGGQAALGPCSQVPAPIPGHFQATPQEDV-----ENPPAILGEPERQQRVQQ 340 Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 S ++ + + + + + K L L + + RL ++ Sbjct: 341 LESELSKKRKKCESLEQEARKKQRRCEELELQLREAQNENARLVEENSRLSGRATEKEQV 400 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + + D + Q + + +Q ++ + + R LE + + A Sbjct: 401 EWENAELRGQLLGVTQERDSALRKSQGLQSKLEGLEQVLKHMREAAQRRRQLEVEHEQAR 460 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 L + +Q + R R++ + + +V + L S Sbjct: 461 LSLQEKQEEVR-------------RLQQAQAEAKREHEGAVQLLESTLDSM 498 >gi|29830831|ref|NP_825465.1| single-stranded DNA-binding protein [Streptomyces avermitilis MA-4680] gi|37999531|sp|Q82FG5|SSB1_STRAW RecName: Full=Single-stranded DNA-binding protein 1; Short=SSB 1; AltName: Full=Helix-destabilizing protein 1 gi|29607944|dbj|BAC72000.1| putative single-stranded DNA-binding protein [Streptomyces avermitilis MA-4680] Length = 202 Score = 40.1 bits (92), Expect = 0.95, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|297627498|ref|YP_003689261.1| Single-strand binding protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296923263|emb|CBL57860.1| Single-strand binding protein [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 188 Score = 40.1 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 17/36 (47%), Gaps = 1/36 (2%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 KD + ++ +W+ + +G+ +V G++ Sbjct: 48 KDGEALFLNCAVWRQAAENVAESLTKGMRVIVQGRL 83 >gi|71280402|ref|YP_271665.1| chain length determinant family protein [Colwellia psychrerythraea 34H] gi|71146142|gb|AAZ26615.1| chain length determinant family protein [Colwellia psychrerythraea 34H] Length = 528 Score = 40.1 bits (92), Expect = 0.96, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 52/185 (28%), Gaps = 19/185 (10%) Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 I N + + + L + ++E +++E + K I + Sbjct: 257 NSIQTTYDDRINELEVLLDN--LKLRYTEKHPDVIETSRNLEHLNKLRSSEIEKYLAQNN 314 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY----- 454 L+ + N + + + L+ + + + + + Sbjct: 315 ENTGSLKRLSANPVIQEVQIHVNQLENLIASLNVRADNYRQRIIELENRVHTL-PEIEAE 373 Query: 455 KNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFD---GQANAIVINKAPPKEQPTKK 511 L RGY ++ +++K + D + VI+ P + TK Sbjct: 374 LIALNRGYGITKEKYEELLSRKETAQLAQQ-----ADETTDKIQFRVID---PPRKATKP 425 Query: 512 CQLHN 516 Sbjct: 426 SGPKR 430 >gi|269469110|gb|EEZ80658.1| DNA polymerase III, alpha subunit [uncultured SUP05 cluster bacterium] Length = 1150 Score = 40.1 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 7/115 (6%) Query: 25 KHIVESNLSHVCVRGEISGYRGIH-SSGHAYFSLK--DNHSRIDAIIWKGTLNKIEFLPE 81 K V N V V IS R I SG S+ D +++ A+I+ L + Sbjct: 980 KDTVLRNNKEVRVLALISELRYITTRSGDQMASIIIEDGSTKLSAVIFPRALGPLSDKLI 1039 Query: 82 EGIEFLVIGKITTFPGSSK-YQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 ++ KI YQ+I++ + + K K+ + LF+ Sbjct: 1040 ANEIVVISAKIKKNKKFGDEYQLIVDEIDSF---DSFFKSVEIKLKVEHQTLFNQ 1091 >gi|268317884|ref|YP_003291603.1| hypothetical protein Rmar_2336 [Rhodothermus marinus DSM 4252] gi|262335418|gb|ACY49215.1| hypothetical protein Rmar_2336 [Rhodothermus marinus DSM 4252] Length = 265 Score = 40.1 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 12/161 (7%), Positives = 42/161 (26%) Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 + L + + + + ++ L + R L ++ + Sbjct: 102 MAELIEQARALQEEAERLSRSVETWRQVRTAALEEHLEALQQRAAALSEQVRLLPRLEWE 161 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 RH + + + + + + I +++ + Sbjct: 162 MYLRHVQQQDAELARQIAEEWHWEETLQLQAMRIRQMPEGPEREQAIAELRRQLEQVFER 221 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 +E + I L ++ L R+ ++ + + Sbjct: 222 KQENRRREIARLEQQLRLLRARLSERERYRQQIIEQRLREL 262 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 15/149 (10%), Positives = 41/149 (27%), Gaps = 6/149 (4%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + +++ L + L RL R + + + Sbjct: 97 RMEAVMAELIEQARALQEEAERLSRSVETWRQVRTAALEEHLEALQQRAAALSEQVRLLP 156 Query: 366 IQKNRQHILEKQQH-----IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + ++ QQ + + H + +I + E+ + I L + Sbjct: 157 RLEWEMYLRHVQQQDAELARQIAEEWHWEETLQLQAMRIRQMPEGPER-EQAIAELRRQL 215 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRIL 449 +++ R + +I + + L Sbjct: 216 EQVFERKQENRRREIARLEQQLRLLRARL 244 >gi|261879120|ref|ZP_06005547.1| DNA helicase RecG [Prevotella bergensis DSM 17361] gi|270334216|gb|EFA45002.1| DNA helicase RecG [Prevotella bergensis DSM 17361] Length = 700 Score = 40.1 bits (92), Expect = 0.97, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 14/83 (16%) Query: 28 VESNLSHVCVRGEISGYRGIHSSG-------HAYFSLKDNHSRIDAIIWKGTLNKIEFLP 80 + + V V+G+I + S H F+ D +D + ++G + Sbjct: 55 LSGEMPFVQVKGKILSFEEFPMSARKKRVVAH--FT--DGFGIVDLVWFRG-AQYVYKNY 109 Query: 81 EEGIEFLVIGKITTFPGSSKYQI 103 + G E++V GK + + +YQ Sbjct: 110 KVGEEYIVFGKPSVY--QGRYQF 130 >gi|301025455|ref|ZP_07189002.1| nuclease sbcCD, subunit C [Escherichia coli MS 69-1] gi|300395970|gb|EFJ79508.1| nuclease sbcCD, subunit C [Escherichia coli MS 69-1] Length = 1047 Score = 40.1 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAVEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|212709804|ref|ZP_03317932.1| hypothetical protein PROVALCAL_00852 [Providencia alcalifaciens DSM 30120] gi|212687615|gb|EEB47143.1| hypothetical protein PROVALCAL_00852 [Providencia alcalifaciens DSM 30120] Length = 1479 Score = 40.1 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 17/179 (9%), Positives = 51/179 (28%), Gaps = 9/179 (5%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + L +L + + + K L AL + + ++ + ++ Sbjct: 424 NRARELCQLPDLSIENVDEWLETFEAKEQQATEALLALEQKMSVADAAHSQFEQAYQLVK 483 Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L + + + L +Q R + E QQ ++ Sbjct: 484 AMLGDVSRGDAYQHARTLLRDWSSQQHLAERVQPLRMQLSELQQRLDSQRNAEKLLSEFC 543 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448 K+ ++ + + L + + R++ + +++ +S + Sbjct: 544 KRYGQSVEPDELDALMAELEILQEELSTGVNESGEKRMQ--MRQELEQIRQRISQLSAK 600 >gi|54295457|ref|YP_127872.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens] gi|53755289|emb|CAH16783.1| hypothetical protein lpl2543 [Legionella pneumophila str. Lens] Length = 1164 Score = 40.1 bits (92), Expect = 0.99, Method: Composition-based stats. Identities = 17/179 (9%), Positives = 52/179 (29%), Gaps = 1/179 (0%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A+ +E + L N ++ + + L + Q R+ Sbjct: 306 AIQQQEREKKRLENDRQQMQVDSQLIEEQLKLDNEELHNCKLKAQQLEEHLRHLKMEFKE 365 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + E + + KS+ + + Q + + +Q Q++ + + Sbjct: 366 QESLWQEKQKEQSQWEKIWQEVQTKSNTIKNQYQLTQAKLQHLEQKRHQVLVRLEKLNLE 425 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + L + + + + L + ++ + + T + L + Sbjct: 426 QSAILLDDLQKNKIELQEKHSQLKETQEFDEEQLRQANETQ-SDLQNQLQNTEQQLHAL 483 >gi|302552666|ref|ZP_07305008.1| single-strand binding protein [Streptomyces viridochromogenes DSM 40736] gi|302470284|gb|EFL33377.1| single-strand binding protein [Streptomyces viridochromogenes DSM 40736] Length = 195 Score = 40.1 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|194380946|dbj|BAG64041.1| unnamed protein product [Homo sapiens] Length = 1048 Score = 40.1 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 861 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKSRKKEEQEFVQKQQQELDGS 920 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 921 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 977 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 978 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1017 >gi|193215249|ref|YP_001996448.1| ATP-dependent DNA helicase RecG [Chloroherpeton thalassium ATCC 35110] gi|193088726|gb|ACF14001.1| ATP-dependent DNA helicase RecG [Chloroherpeton thalassium ATCC 35110] Length = 711 Score = 40.1 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 15/147 (10%) Query: 56 SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS-- 113 SL D RID + ++G + + EG V GKI F + Q+ + P Sbjct: 87 SLYDKTGRIDLVWFQGAN-YLSKMLREGDALAVHGKIGFF--NGTPQL----MHPDFDKL 139 Query: 114 -GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL 172 G + + K LF+ P+ +P+ + ++R I++ + + Sbjct: 140 NGAERSDDDDLKNDF---ELFNTGKIVPLYSLPEAL-KRGGLNSRIMRRIVRNLLDKSLG 195 Query: 173 RV-IIFPVKVQGDECPKEIANAILQLN 198 + P + + +A A Q++ Sbjct: 196 HIEENLPASICENYRLMPLAMAYEQIH 222 >gi|149632137|ref|XP_001505810.1| PREDICTED: similar to PTPRF interacting protein alpha 2 [Ornithorhynchus anatinus] Length = 1257 Score = 40.1 bits (92), Expect = 1.00, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEEVAAANQEIVALREQN 223 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 ++ + +G + I ++ + D +++L + Sbjct: 224 AHIQRKM--ASGEGSTESEHIDGMEPGQKVHEKRLSNGSIDSTDDTSQVVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKDRLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|198471864|ref|XP_001355753.2| GA19364 [Drosophila pseudoobscura pseudoobscura] gi|198139499|gb|EAL32812.2| GA19364 [Drosophila pseudoobscura pseudoobscura] Length = 691 Score = 40.1 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 8/203 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + A PV + + L+ I K+ L L + + Sbjct: 208 DQLGINSPNTSRSASPVLKMSTMRHVQLKCHQQEIRRSYNLDKLLLLQRLQRLQQQKLRH 267 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++ + RL E+ + + + S + H++ + +L +QQ I Sbjct: 268 MTEIGKEIARLSVHCVTRNELRLKPRTTSL----SGDHSHHIHHSMGRTLSVLLAEQQQI 323 Query: 381 EQIVKQHLRY---IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + + + K +L RE + R ++ L R + L K+ Sbjct: 324 APLALYNAQQLTKQIEGLRCKQRLLQAERETCQQRNKKATLRLEALAER-KEALQQKLHR 382 Query: 438 CHTSVSITTRILQSFAYKNTLKR 460 + LQ ++ +R Sbjct: 383 QRHHLEKERLELQLLQPQHLAQR 405 >gi|118101519|ref|XP_417710.2| PREDICTED: similar to guanylate binding protein [Gallus gallus] Length = 1020 Score = 40.1 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 20/225 (8%), Positives = 63/225 (28%), Gaps = 7/225 (3%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 N E + A+A G E D L + + AV + + Sbjct: 728 NTEAVAEAVAEYRK------GMEQDLVLPTDSRAVLVDVHRRWERRAVTLFLSHAFADNE 781 Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 + ++ + + + + L ++R + ++ Sbjct: 782 RTYQCQLMVKLEAAKEEFCRRNEEASEQQCQKVLRELWQNVERRLQCGDYAAPGGAQLFQ 841 Query: 348 RHFNHIINRIKSDFLIH-NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 +++ + K + L +++ + Q + + + ++++ A Sbjct: 842 DDLGYVLEKYKWWPGKGVKADAVLEVFLREREPLAQALHATDAQLVMMERQREAAAAKEA 901 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + L + L + ++ + R+L+ Sbjct: 902 AVREAEVACLKEQQRSLEEHCRQLEQRLLEEQRLRLKEQDRMLEH 946 >gi|109090486|ref|XP_001114185.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 3 [Macaca mulatta] Length = 1205 Score = 40.1 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 885 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 944 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 945 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1001 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1002 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1041 >gi|326428285|gb|EGD73855.1| hypothetical protein PTSG_05550 [Salpingoeca sp. ATCC 50818] Length = 534 Score = 40.1 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 66/213 (30%), Gaps = 7/213 (3%) Query: 244 ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK 303 +A H D +A T + + LE + L+ Sbjct: 275 WTATAHAPPRPEHRDDDDRKAATKAEKQRHEQQLASERRQHKRELEQ-----LQHLLSSA 329 Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + + ++ L R ++D+L L+ E + H ++ I Sbjct: 330 QQKEEAATRTNKTQERELQRLRGKIDQLQANLKGKAEAANKLEATVTAHNATIRANEETI 389 Query: 364 HNIQKNRQHILEK-QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 ++ + + + QQ +++V++ L K+ + +L Q + L I+ Sbjct: 390 SRLKGEVKKLNSRMQQQDKKLVEEKEISTRLTKQNESLSAQLLLVQRDTSVTALKRRIEH 449 Query: 423 LITRIEFILSHK-IKSCHTSVSITTRILQSFAY 454 L ++ I + + LQ + Sbjct: 450 LRHALQQTQDLLVIAQVKEKIRQASARLQVASP 482 >gi|300818282|ref|ZP_07098493.1| nuclease sbcCD, subunit C [Escherichia coli MS 107-1] gi|300529173|gb|EFK50235.1| nuclease sbcCD, subunit C [Escherichia coli MS 107-1] Length = 1047 Score = 40.1 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|226939763|ref|YP_002794836.1| Chain length determinant protein [Laribacter hongkongensis HLHK9] gi|226714689|gb|ACO73827.1| Chain length determinant protein [Laribacter hongkongensis HLHK9] Length = 742 Score = 40.1 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 12/126 (9%), Positives = 34/126 (26%), Gaps = 4/126 (3%) Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH--NIQKNRQHILEKQQHIEQIVKQ 386 RL L + ++ N I ++ + + R+ Q + + Sbjct: 271 MRLQDNGLQALRNEVTKRTEQLNQSIAGLEDKHPARGPALAEIRELAQRLQARENEFDQH 330 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS--HKIKSCHTSVSI 444 + + L ++ + + L + + +S +I + + Sbjct: 331 VRENYLHRLQATLDQKTRLTQELEQSLAQLEGQAGTFAQQFQQAMSLTRQIAEQNERLKQ 390 Query: 445 TTRILQ 450 L Sbjct: 391 VQDRLD 396 >gi|114319840|ref|YP_741523.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii MLHE-1] gi|114226234|gb|ABI56033.1| chromosome segregation protein SMC [Alkalilimnicola ehrlichii MLHE-1] Length = 1168 Score = 40.1 bits (92), Expect = 1.0, Method: Composition-based stats. Identities = 10/165 (6%), Positives = 38/165 (23%), Gaps = 6/165 (3%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 ++ + L+ L + R + + I Sbjct: 192 ERLEDVREEVRRQLEKLRRQAEVARRYRELKQAERDTRAELITLRQASLKAQLEEQEAVI 251 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q E++ + + + + + + +I + Sbjct: 252 AAKVNAREFALATQRQAEREIEAIRATQGEAGDRLNAIQADYYGVGSEIARIEQQISHRR 311 Query: 418 THIKKLITRIE------FILSHKIKSCHTSVSITTRILQSFAYKN 456 K + + L ++ +++ L++ + Sbjct: 312 ELRDKQLRELRDSEGEVQALERGLEEDREKLALLEERLEALQPEQ 356 >gi|309794881|ref|ZP_07689302.1| nuclease sbcCD, subunit C [Escherichia coli MS 145-7] gi|308121534|gb|EFO58796.1| nuclease sbcCD, subunit C [Escherichia coli MS 145-7] Length = 1047 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|301771444|ref|XP_002921148.1| PREDICTED: dixin-like [Ailuropoda melanoleuca] Length = 822 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 23/238 (9%), Positives = 71/238 (29%), Gaps = 13/238 (5%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285 ++ +I ++ + II + G E D ++ D R +P + E + + Q Sbjct: 370 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTSLETSWEEQLLEQQEH 429 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + E +I ++ + + ++L ++ + + Sbjct: 430 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 484 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + + + QQ + Q L+ + + + Sbjct: 485 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 542 Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + + ++ + + + + ++ + R L +Y+ L+R Sbjct: 543 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQAKLEEALRKLSEASYQQVDLER 599 >gi|17556819|ref|NP_498834.1| hypothetical protein ZC262.3 [Caenorhabditis elegans] gi|21903495|sp|P34595|YOD3_CAEEL RecName: Full=Uncharacterized protein ZC262.3; Flags: Precursor gi|13559793|gb|AAK29995.1| Hypothetical protein ZC262.3a [Caenorhabditis elegans] Length = 773 Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 25/241 (10%), Positives = 67/241 (27%), Gaps = 19/241 (7%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 DY + + + L + + + I L + Sbjct: 480 LDYLDWYSYDVFN-SVFWGGLATSLIVCLISFLLNITWILTRKSALWWIQRAERLSRVRK 538 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + +++ L + ++I+ ++ + S K Q + Sbjct: 539 MVEAMEKYRVRQMESLHEKYTKRVQIVRDNYHQQVEALRVSYASQQEKFQNYKAAQ-VDA 597 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 H++ + + + ++ L E + ++ + T L R++ + + Sbjct: 598 VHSHLDAMRDGYNNQLGRVREYGSKRAEQLWESYERQVNRMRTF--SLQHRLK--MMRQY 653 Query: 436 KSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 K V+ LQ+ + + +Q N + + I DG + Sbjct: 654 KVKQRYVNKLLESLQATSPE---------VQLENEEKVRAALEI-PDDLATI---DGSMD 700 Query: 496 A 496 Sbjct: 701 T 701 >gi|297481405|ref|XP_002692090.1| PREDICTED: kinesin family member 16B [Bos taurus] gi|296481545|gb|DAA23660.1| kinesin family member 16B [Bos taurus] Length = 1339 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 54/161 (33%), Gaps = 6/161 (3%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 R + ++ K + + + + L + ++ +E E + I ++ Sbjct: 643 ERQQREELEKLESKRKLIEEMEEKQKSDKAALERMQQEVETQRQETEMA-QRQIRKQEES 701 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + ++S + ++ ++ E +Q +Q + + E+ ++ ++ Sbjct: 702 LKRRSSHLEST--LKDLLAEKERFEEARQREQQETELQKKKQEEERFLRVQEELQRLQEL 759 Query: 410 KNRIFYLHTHIKKLITRIEFILS---HKIKSCHTSVSITTR 447 + I + + R++ K++ + R Sbjct: 760 NSHEKAEKVQIFQELERLKREKEEQYAKLEQEKQRLEEQER 800 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 44/150 (29%), Gaps = 3/150 (2%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L LS + R+ + +L+ ++ ++ Sbjct: 948 QCKKRQLQDLLQQHLPRLSEEKQRVREILDRGPLDLDNTLYLVENEMEEKEEQLAQYQAS 1007 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 + + Q E ++ + ++ R + + E+ R+ H+ +++ Sbjct: 1008 ASQLQKLQATFEFTANVARQEEKVRRKEKEILESREQQQREALERAVARLERRHSALQRR 1067 Query: 424 ITRI---EFILSHKIKSCHTSVSITTRILQ 450 R E ++ + + L+ Sbjct: 1068 CARAAGGEQAGQEALEKDRERLEHEIQQLK 1097 >gi|239930203|ref|ZP_04687156.1| single-stranded DNA-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291438547|ref|ZP_06577937.1| single-strand DNA-binding protein [Streptomyces ghanaensis ATCC 14672] gi|291341442|gb|EFE68398.1| single-strand DNA-binding protein [Streptomyces ghanaensis ATCC 14672] Length = 190 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|297200911|ref|ZP_06918308.1| single-strand DNA-binding protein [Streptomyces sviceus ATCC 29083] gi|197716409|gb|EDY60443.1| single-strand DNA-binding protein [Streptomyces sviceus ATCC 29083] Length = 200 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|313499852|gb|ADR61218.1| SbcC [Pseudomonas putida BIRD-1] Length = 1214 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 56/199 (28%), Gaps = 9/199 (4%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY---KINTLNSLLKALPNS 317 DL P A + + +L A+ + + + L K Sbjct: 772 DLAGVLPKEALKALNEDPANAFLALDQQIAQRLQQLEQRKDELEEQQARQAQLDKLRDQQ 831 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 + + L E + H + +++ R + Sbjct: 832 QARVQGLQQLQHTLAALDEQRQQAQTSLGELLGEHASAEAWQQHMEATLEQARALNADTA 891 Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKL----ITRIEFIL 431 Q ++ + Q ++ K ++ L +Q + +I + +L + R+ + Sbjct: 892 QRLQDLRTQGVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMD 951 Query: 432 SHKIKSCHTSVSITTRILQ 450 ++ + + ++ Sbjct: 952 DAQVNELRQRLQGAEKAIE 970 >gi|195129944|ref|XP_002009414.1| GI15247 [Drosophila mojavensis] gi|193907864|gb|EDW06731.1| GI15247 [Drosophila mojavensis] Length = 872 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 93/342 (27%), Gaps = 37/342 (10%) Query: 119 ALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFP 178 EK + E F P+ +P++++ T V + I + +I F Sbjct: 461 KTEKLVLSKISESYFDKILAAPLALLPQMLSCQTLAQSEVEKAIYCLLL------LINFA 514 Query: 179 VKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND-EMIVRAIA 237 + K A R + ++A ++ + F A Sbjct: 515 SIAKKAYLDKCCALLEQPQLQYALARAMLSGNEQLVA----AMLQIAQFEHFPKAAVAKY 570 Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S I + G + ++ A R + + L + Sbjct: 571 VSRIG---SSGQGSPTASSEQAEQWRNLSAILKSHRTFMD------------RELAQRVS 615 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 LI TL Q + +R+D L + + + + N Sbjct: 616 TLIDTIGQTLRRNELQSAPVSQVIELYNHRIDSLNCTTHNMQQRLEQASVQLCNSTQQIN 675 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML------REQTKN 411 + + Q +L Q+ ++ K K +L + ++ Sbjct: 676 VQNAELERFQTKNFELLISQERLQTQCKDLKAQAAQLKTNLSDLLKRWSETSEHLQASER 735 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 R+ + I L E L + + + L++ + Sbjct: 736 RLSVKQSEIADLQKDCEE-LRRNLAAKSEELV----KLEALS 772 >gi|14591565|ref|NP_143647.1| hypothetical protein PH1812 [Pyrococcus horikoshii OT3] gi|74571671|sp|O59476|TIAS_PYRHO RecName: Full=tRNA(Ile2) 2-agmatinylcytidine synthetase TiaS; Short=tRNA(Ile2)-agm2C synthetase; AltName: Full=tRNA(Ile2) agmatidine synthetase gi|3258248|dbj|BAA30931.1| 424aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 424 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 16/104 (15%) Query: 32 LSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAII------WKGTLNKIEFLPEEGIE 85 +V V+G+++ + H +F ++D +I ++ + K+ G E Sbjct: 265 YDNVIVKGKVAS-KYWERGRHVFFEIEDETGKIRVAAFEPTKKFRNYVRKLLP----GDE 319 Query: 86 FLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLE 129 +V G + I +E P L+ +E RK K + Sbjct: 320 VIVAGGVK--EHEGVLTINLEKFYPI---KLVPKVEYRKPKCPK 358 >gi|224094146|ref|XP_002192005.1| PREDICTED: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Taeniopygia guttata] Length = 1199 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 33/351 (9%), Positives = 98/351 (27%), Gaps = 19/351 (5%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 205 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 ++ + +G + I ++ + D A +++L + Sbjct: 206 AHIQRKM--AAGEGSAESEHIEGMEPGQKVHEKRLSNGSIDSNDEASQVVELQELLEKQN 263 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + + E L+ ++ T E+ + + + E Sbjct: 264 YEMAQMK-------------ERLAALSSRVGEVEQEAETTRKELIKTEEMNSKYQRDIRE 310 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 A + + + S ++ + LE + Sbjct: 311 AMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQLEDKNRQLQER 370 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQ 408 +++ + + + E Q I + K R+ +E++ + + + Q Sbjct: 371 LELAEQKLQQT--MRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEAQLEEKNQ 428 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 R ++ R+ + + + + + + KN L Sbjct: 429 ELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 479 >gi|254456582|ref|ZP_05070011.1| ATP-dependent DNA helicase RecG [Candidatus Pelagibacter sp. HTCC7211] gi|207083584|gb|EDZ61010.1| ATP-dependent DNA helicase RecG [Candidatus Pelagibacter sp. HTCC7211] Length = 683 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%) Query: 58 KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI 103 KD ID I + ++ + G E V GKI F ++YQ+ Sbjct: 89 KDETGEIDCIFFNSYEGYVKKILPIGKEITVSGKIGYF--RNRYQL 132 >gi|40788907|dbj|BAA13195.2| KIAA0204 protein [Homo sapiens] Length = 1164 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 896 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 955 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 956 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1012 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1013 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1052 >gi|241171657|ref|XP_002410681.1| conserved hypothetical protein [Ixodes scapularis] gi|215494918|gb|EEC04559.1| conserved hypothetical protein [Ixodes scapularis] Length = 514 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 22/208 (10%), Positives = 61/208 (29%), Gaps = 15/208 (7%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D + + TP V + ++ + ++ L+ Sbjct: 290 LLDSGSCSSSKTPEEKMPSQVFSHLAEMKQCLEQASQRQLQHSKQKLRELQHEQEELQRQ 349 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH-------FNHIINRIKSDFLIHN-- 365 + + + R DR+ ++ E R + +++ L Sbjct: 350 RHMEMERAYRRQLEDRIRQKEALFAERKRQRSAEKESVLRKSAEELEEKLEQVRLNQREM 409 Query: 366 ---IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + R+ + + Q+ +Q + KK +LR+ R + + Sbjct: 410 DSALDMWRERVADYQEAANLRARQRAQEALEFKKRIAQHERLLRQAEHQRNMHRVEMEES 469 Query: 423 LITRIEFILSHKIKSC-HTSVSITTRIL 449 + R++ ++ + + + + L Sbjct: 470 I--RLQSMMERLREKEDKSRLHAQEKQL 495 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 17/177 (9%), Positives = 52/177 (29%), Gaps = 15/177 (8%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E + + L + K + + L +S Q L ++ + L R+ +E R+ Sbjct: 304 EKMPSQVFSHLAEMKQCLEQASQRQLQHSKQKLRELQHEQEELQRQRHMEMERAYRRQLE 363 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE------QIVKQHLRYIFLEKKEKIA-- 400 + ++ + + + + +E ++ ++ + +E++A Sbjct: 364 DRIRQKEALFAERKRQRSAEKESVLRKSAEELEEKLEQVRLNQREMDSALDMWRERVADY 423 Query: 401 --ILHMLREQTKNRIFYLHTHIKKLITRIEFI-----LSHKIKSCHTSVSITTRILQ 450 ++ Q I + + + + L+ Sbjct: 424 QEAANLRARQRAQEALEFKKRIAQHERLLRQAEHQRNMHRVEMEESIRLQSMMERLR 480 >gi|114632693|ref|XP_001137318.1| PREDICTED: STE20-like kinase isoform 4 [Pan troglodytes] Length = 1205 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 885 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 944 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 945 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1001 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1002 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1041 >gi|1944185|dbj|BAA19655.1| hSLK [Homo sapiens] gi|55664644|emb|CAH70403.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens] gi|55957392|emb|CAI12396.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens] gi|84105520|gb|AAI11566.1| SLK protein [Homo sapiens] gi|119570001|gb|EAW49616.1| STE20-like kinase (yeast), isoform CRA_b [Homo sapiens] gi|119570002|gb|EAW49617.1| STE20-like kinase (yeast), isoform CRA_b [Homo sapiens] Length = 1204 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 884 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 943 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 944 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1000 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1001 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1040 >gi|296193658|ref|XP_002744585.1| PREDICTED: serine/threonine-protein kinase 10 isoform 3 [Callithrix jacchus] Length = 860 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + L + + ++++ + L+K R+ L R Sbjct: 613 ICDKERECLMRKQELLRDREAALWEMEEHQLQERHQLVK--QQLKDQYFLQRHELLRKHE 670 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + K+ + + + ++ + +Q Sbjct: 671 KELEQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 730 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + + CH V T+ Sbjct: 731 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMLAQCESNVSELQQLQNEKCHLLVEHETQK 790 Query: 449 LQSFA 453 L++ Sbjct: 791 LKALD 795 >gi|291389958|ref|XP_002711489.1| PREDICTED: cytoskeleton-associated protein 4, partial [Oryctolagus cuniculus] Length = 584 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 13/164 (7%), Positives = 45/164 (27%), Gaps = 18/164 (10%) Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L + + L+ + + + + + + +++ Q + + Sbjct: 312 LKQEQQAFKEAADKERLALQALTEKLLQSEESVSH---LPDEVRRLEEELQQLKADARRP 368 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 E+ +EK L + ++ + + +E +LS K + Sbjct: 369 EEDGGFRSSGALEALQEKSQGLDSRLQTVEDGVHAVQVAAAHQTESLESLLS-KSQEHEQ 427 Query: 441 SVSITTRILQSF--AYKNTLKRGYTSIQDTNN--NFITQKRNLA 480 + + L+ + + D + + + Sbjct: 428 RLGALQQRLEGLGASPEA----------DKDGLASTVRSLGEAQ 461 >gi|311273921|ref|XP_003134102.1| PREDICTED: serine/threonine-protein kinase 10-like [Sus scrofa] Length = 434 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 16/185 (8%), Positives = 55/185 (29%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + L + + ++ + + L+K R+ L R Sbjct: 187 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 244 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + K+ + + + ++ + +Q Sbjct: 245 KEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSAAEQRE 304 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + + CH V T+ Sbjct: 305 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMVAQCESNMSELQQLQNEKCHLLVEHETQK 364 Query: 449 LQSFA 453 L++ Sbjct: 365 LKALD 369 >gi|297687338|ref|XP_002821173.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 2 [Pongo abelii] Length = 1205 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 885 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 944 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 945 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1001 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1002 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1041 >gi|159027567|emb|CAO86939.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 426 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 25/69 (36%), Gaps = 3/69 (4%) Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHNNKR 519 G+ I + + IT + ++ + DG+ + V+ P + + + N Sbjct: 146 GF-IISN-DGKIITNAHVVEGADKVTVTLKDGRTIDGKVLGSDPLTDVAVVQVETSNLPT 203 Query: 520 EKQGTQGEL 528 K G L Sbjct: 204 VKLGNSDSL 212 >gi|331651325|ref|ZP_08352350.1| exonuclease SbcC [Escherichia coli M718] gi|331051066|gb|EGI23118.1| exonuclease SbcC [Escherichia coli M718] Length = 1047 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|170767737|ref|ZP_02902190.1| nuclease SbcCD, C subunit [Escherichia albertii TW07627] gi|170123225|gb|EDS92156.1| nuclease SbcCD, C subunit [Escherichia albertii TW07627] Length = 1047 Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 46/162 (28%), Gaps = 14/162 (8%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ +R R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQKETRRRQQTLQQALAEEEKAQPQLAALRLALPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIV------KQHLRYIFLEKKEKIAILHMLREQTKNR 412 + RQ I E ++ + + H + E + + L+ ++ +R Sbjct: 299 IAEHSAALTHTRQQIEEVNTRLQSTMALRANIRHHATRLSAEIQHRQQTLNAWLQE-NDR 357 Query: 413 IFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 358 FRLWNNELTGWRAQFSQQASDRAHLRQWQQQLNHAGQKLNAL 399 >gi|309791512|ref|ZP_07686014.1| hypothetical protein OSCT_1965 [Oscillochloris trichoides DG6] gi|308226437|gb|EFO80163.1| hypothetical protein OSCT_1965 [Oscillochloris trichoides DG6] Length = 578 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 20/194 (10%), Positives = 57/194 (29%), Gaps = 9/194 (4%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 T + P + ++ L + ++ + + +D R Sbjct: 73 TLGVALLRPQPPRRVAQRLDQILDLRERLATAVELHQQQADDPTSRMQQADAHSVAQTLR 132 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD--------FLIHNIQKNRQHILEKQQH 379 ++P L+ + F ++ +Q+ Q + + ++ Sbjct: 133 PAQIPWRLDRPWFLGGFLPLALATTLLFLPNPQDAVLAERQATQAALQQVEQQLAQLEEQ 192 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 I Q + ++E A+ L + +R + R++ L + Sbjct: 193 IAQNSELSQADRERLEQELQALREALAQNPGDR-EEALAELSASEARLQQELDPNADAQR 251 Query: 440 TSVSITTRILQSFA 453 ++ R L++ + Sbjct: 252 AALEQMARNLETLS 265 >gi|312200938|ref|YP_004020999.1| single-strand binding protein [Frankia sp. EuI1c] gi|311232274|gb|ADP85129.1| single-strand binding protein [Frankia sp. EuI1c] Length = 196 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109 KD + + IW+ + ++G +V G++ TF + ++ ++ + Sbjct: 48 KDGEALFLRCSIWRQAAEHVAESLQKGARVIVQGRLKQRTFETREGEKRTVIELDVDEIG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|159491050|ref|XP_001703486.1| centriole proteome protein [Chlamydomonas reinhardtii] gi|158280410|gb|EDP06168.1| centriole proteome protein [Chlamydomonas reinhardtii] Length = 3124 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 56/212 (26%), Gaps = 11/212 (5%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E T+A A S + A L + Sbjct: 1678 EARVTIASQYCAFPVSVEQAANASISTSASTSTSGIGAAMAWLRHHSDTATASVRPKGWE 1737 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L + L R R + +L ++ + + + + + QK Sbjct: 1738 QLPGRAPPGRGLVKHRGRGSQRRPPEHSSLRRLVDQLHSDVVQLQDEQQRQKDEQQRQKQ 1797 Query: 370 R--------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 Q ++Q+ +Q K L+ E + K+ L +++ K ++ Sbjct: 1798 EVWAKMQQLQDEQQRQKDEQQRQKDELQRQKQEAEAKMQQLEDEQQRQKQEAEAKMQQLE 1857 Query: 422 KLITRIEFILSHK---IKSCHTSVSITTRILQ 450 R + + ++ + L+ Sbjct: 1858 DEQQRQKDEQQRQKDELQRQKQEAEAKMQQLE 1889 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 40/149 (26%), Gaps = 1/149 (0%) Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 ++ + DQ S D R+ + + Sbjct: 1747 RGLVKHRGRGSQRRPPEHSSLRRLVDQLHSDVVQLQDEQQRQKDEQQRQKQEVWAKMQQL 1806 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 + + + Q ++ + Q ++ + E + K+ L +++ K+ Sbjct: 1807 QDEQQRQKDEQQRQKDELQRQKQEAEAKMQQLEDEQQRQKQEAEAKMQQLEDEQQRQKDE 1866 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +++ E + +++ Sbjct: 1867 QQRQKDELQRQKQEAEAKMQ-QLEDEQQR 1894 >gi|332027402|gb|EGI67485.1| Nesprin-1 [Acromyrmex echinatior] Length = 11559 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 52/187 (27%), Gaps = 14/187 (7%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330 E + + + + + N K LP + R DR Sbjct: 10317 WEEYLTHVQDFLSSGMPGDYNSLSEHRNLCEVHRKLLPEQQNLILTVRQEEDRNRSVTEQ 10376 Query: 331 ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L L I+ R + I + + + + ++Q + + H Sbjct: 10377 FNALTNLHNETLARILERHATVRDRISAWDRYKLDQRKLLTWLKEVERERQRM-NLQFIH 10435 Query: 388 LRYIFLEKKEKIAILHMLR---EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 LR + + A+L + Q ++ + + + + + ++ Sbjct: 10436 LRRLEKILQRIQALLDKMPVGETQIESLQEQQEYLLTNCDEALAVSIRMEHAANVQRIAN 10495 Query: 445 TTRILQS 451 L++ Sbjct: 10496 LRAGLET 10502 >gi|290959031|ref|YP_003490213.1| single-strand DNA-binding protein [Streptomyces scabiei 87.22] gi|260648557|emb|CBG71668.1| putative single-strand DNA-binding protein [Streptomyces scabiei 87.22] Length = 185 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|242024665|ref|XP_002432747.1| Liprin-alpha, putative [Pediculus humanus corporis] gi|212518232|gb|EEB20009.1| Liprin-alpha, putative [Pediculus humanus corporis] Length = 1207 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 19/234 (8%), Positives = 62/234 (26%), Gaps = 10/234 (4%) Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 D+ N+ ++ I E ++D L K Sbjct: 260 PDSDVTKVNELQSTIEKQSTEISSWQRRVAELTSRISDLEETLAKTQKELLKSQDSCSKL 319 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 + I ++ + +L + ++ L + + E + Sbjct: 320 QRDLRENAAQKEDQEERISTLEKRYLNAQRESTSLHDLNEKLEQELQHKEAQMKLQEDKI 379 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 I + + +K + +++ + + + Q+ + R +++ Sbjct: 380 RAIQEKLELSEQKLEQFLKLPDMEEELKQRMEALTQAQERHGSAEDRIQRLEAQLEEKNA 439 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSF 452 +L R+ ++ TR+ + + + + + + Sbjct: 440 ELL---------RLNQRLKMNEEHNTRLGATVDKLLSESNDRLQVHLQERMHAL 484 >gi|108808691|ref|YP_652607.1| hypothetical protein YPA_2700 [Yersinia pestis Antiqua] gi|167399182|ref|ZP_02304706.1| exonuclease SbcC [Yersinia pestis biovar Antiqua str. UG05-0454] gi|108780604|gb|ABG14662.1| hypothetical protein YPA_2700 [Yersinia pestis Antiqua] gi|167051686|gb|EDR63094.1| exonuclease SbcC [Yersinia pestis biovar Antiqua str. UG05-0454] Length = 1080 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 48/158 (30%), Gaps = 6/158 (3%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 I+ + L ++Q L + RL +L + ++H+ + Sbjct: 378 QIQQLRAKEQQNSQQLALNEQKLLQTHQRLQQLADY------ANLHAHHQHWEKHLPLWH 431 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 F +Q+ + E+Q H + + L+ + + + + + YL Sbjct: 432 EQFRQLQLQQQQSAQSEQQLHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQ 491 Query: 419 HIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + L + + + + L + + Sbjct: 492 KLLVLEQQQPSAQLRQQLNEFNEQRQICQQLAALSPLA 529 >gi|300903341|ref|ZP_07121269.1| nuclease sbcCD, subunit C [Escherichia coli MS 84-1] gi|301301542|ref|ZP_07207677.1| nuclease sbcCD, subunit C [Escherichia coli MS 124-1] gi|300404636|gb|EFJ88174.1| nuclease sbcCD, subunit C [Escherichia coli MS 84-1] gi|300843039|gb|EFK70799.1| nuclease sbcCD, subunit C [Escherichia coli MS 124-1] gi|315256219|gb|EFU36187.1| nuclease sbcCD, subunit C [Escherichia coli MS 85-1] Length = 1047 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQVLAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|56418854|ref|YP_146172.1| hypothetical protein GK0319 [Geobacillus kaustophilus HTA426] gi|56378696|dbj|BAD74604.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 1373 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 20/164 (12%), Positives = 53/164 (32%), Gaps = 12/164 (7%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + I ++ + L ++ + D+ E+ + + Sbjct: 229 RHLSDTIENMDQAKQQLEQLERDERALKRLCDQYRLYNEYMIAEKATEYVKAVKQAEQLA 288 Query: 358 KSDFLIHNIQKN-RQHILEKQQHIEQIVKQHLRYIFL----------EKKEKIAILHMLR 406 + +H+ ++ R+ + E + I ++ ++ ++ EK L R Sbjct: 289 AAQHRLHDEEEQARKTLDELDESITRLRREEDVLRSREIDLAGHEVFQQAEKYEQLKSER 348 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 E+ + R I + R+E ++ + R L+ Sbjct: 349 ERLQERWERHEQTIAE-KERLERQHRRRLDESEARLDDLERKLE 391 >gi|332022213|gb|EGI62528.1| STE20-like serine/threonine-protein kinase [Acromyrmex echinatior] Length = 1701 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 55/199 (27%), Gaps = 11/199 (5%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQ 319 + T + + + + +++ ++ K S ++ Sbjct: 1165 MMTTTTSRVIYGDDENGKVYDDQIFRKQELRELKMLQKMEQKQYQDLSQKAQFNKDQQEK 1224 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 R L+R L ++ + + + + ++ Sbjct: 1225 RFEQERQILERSAEADLEALARQQRQQIERAEAQQEVDLRVSSKKIRSEQERELKQFREG 1284 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLR---------EQTKNRIFYLHTHIKKLITRIEFI 430 ++Q ++ + I L K+K +R E+ K + L+ + + R+ Sbjct: 1285 LKQELRLLKQEIDLMPKDKRKSTFKIRKEKLEAEHEEREKLFLEKLNESHEMSLRRLSDS 1344 Query: 431 LSHKIKSCHTSVSITTRIL 449 KI + L Sbjct: 1345 HREKIALMERQFLQQKQQL 1363 >gi|170288489|ref|YP_001738727.1| metal dependent phosphohydrolase [Thermotoga sp. RQ2] gi|170175992|gb|ACB09044.1| metal dependent phosphohydrolase [Thermotoga sp. RQ2] Length = 344 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 +L+D + A+ W + +EG V G++ F QI +++ Sbjct: 60 MTLEDRTGTVRAVDW-YNAELNDQRLKEGNVVRVKGRVVFFENR--IQINVDN 109 >gi|168008264|ref|XP_001756827.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692065|gb|EDQ78424.1| predicted protein [Physcomitrella patens subsp. patens] Length = 766 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 47/144 (32%), Gaps = 6/144 (4%) Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 + + ++ + KK + + R T + K + +++ Sbjct: 127 LLKKSERRKDRSNIPKKVQAPKAPVRTTPPTMRTVQPSTSLSKKADMEMEEIIRRMRDLQ 186 Query: 440 TSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINFFDGQANAIV 498 ++ KN LK+GY I + + + +L + NF G A+V Sbjct: 187 IKLAKLEENTSINNSKNVLKQGYGIICWKDGKIGLKNREDL-----LQTNFDKGGMRALV 241 Query: 499 INKAPPKEQPTKKCQLHNNKREKQ 522 + E ++ + + + + Sbjct: 242 QDYLKEHETVARESASYGARVDDE 265 >gi|157870327|ref|XP_001683714.1| hypothetical protein [Leishmania major strain Friedlin] gi|68126780|emb|CAJ05311.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 866 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 16/183 (8%), Positives = 51/183 (27%), Gaps = 10/183 (5%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + + R + L L + L + + + RE ++ Sbjct: 21 QQARMSEETCAELRRRCQGLETEKQGLRLELQEAQVRLQARQTQTEEQRREAAEAKLTVL 80 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK--QHLRYIFLEKKEKIAI 401 ++ + + + + Q ++ + QH + + +++ + Sbjct: 81 SLTAERDELAAKVQEAWDRVAELSAELRRQETEMQRLQTGITAAQHSKELAMQQHSHVEQ 140 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK-- 459 + ++ R+ L ++ +S ++ Y+ +L Sbjct: 141 QLRILQEQLRAHETDKHASAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLACE 195 Query: 460 -RG 461 RG Sbjct: 196 SRG 198 >gi|293418463|ref|ZP_06660898.1| exonuclease subunit SbcC [Escherichia coli B088] gi|291324991|gb|EFE64406.1| exonuclease subunit SbcC [Escherichia coli B088] Length = 1047 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 14/161 (8%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L + D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTHLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + + + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|47214811|emb|CAF89638.1| unnamed protein product [Tetraodon nigroviridis] Length = 541 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 20/194 (10%), Positives = 53/194 (27%), Gaps = 13/194 (6%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 A + + G A + S + + RL + + + Sbjct: 75 CAHPQPQSSPGGALVESVDDAEGLSVAVERCPLCGSSRRRLTCARCVQAGDFVYFSGRNS 134 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + RL +L E E + ++ + R + K+ +Q+ + + + Sbjct: 135 ERYKEKMERLKKLKEEKEQLQQRVVQKMSRRLQADQTKWKTMACRRTVQQLKDSVCGCRS 194 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + + LR ++++ + RI + L ++ Sbjct: 195 QLRSDSELLLRSQEE--RQRLQRRAGRHQDKLERIERHRRRLGDL-----------LERR 241 Query: 439 HTSVSITTRILQSF 452 + L + Sbjct: 242 GRELEARLAQLAAL 255 >gi|241758637|ref|ZP_04756751.1| chromosome segregation protein SMC [Neisseria flavescens SK114] gi|241321148|gb|EER57344.1| chromosome segregation protein SMC [Neisseria flavescens SK114] Length = 1161 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|194226617|ref|XP_001914960.1| PREDICTED: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Equus caballus] Length = 1257 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLGKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|167767440|ref|ZP_02439493.1| hypothetical protein CLOSS21_01959 [Clostridium sp. SS2/1] gi|317498565|ref|ZP_07956858.1| HD domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] gi|167710732|gb|EDS21311.1| hypothetical protein CLOSS21_01959 [Clostridium sp. SS2/1] gi|291558725|emb|CBL37525.1| uncharacterized domain HDIG [butyrate-producing bacterium SSC/2] gi|316894052|gb|EFV16241.1| HD domain-containing protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 313 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSG 114 +L+D ID +W+ T F E LV G++T++ Q+ I+ + + G Sbjct: 36 LTLQDKTGMIDGKVWELTNAIGHF--EAMDYILVRGQVTSY--QGSNQLNIQQIRKAQEG 91 Query: 115 T 115 Sbjct: 92 E 92 >gi|298246203|ref|ZP_06970009.1| SMC domain protein [Ktedonobacter racemifer DSM 44963] gi|297553684|gb|EFH87549.1| SMC domain protein [Ktedonobacter racemifer DSM 44963] Length = 1048 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 63/204 (30%), Gaps = 5/204 (2%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 +ETD A+ + ++ + E R + ++ Sbjct: 658 YETDIQTMRERANQLRDSEPRLQQVNEQLITLNDPRAQLREQRNIVAQAAQFQKEVAEAE 717 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L L L L ++ E+ + H N++ + ++ L + Sbjct: 718 QELAELNTQLAALHEQLAVYHELDESIKGQEELRQRSQGAHQNYLKHIEQARALPERERV 777 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 RQ E +Q +++ + YI L +R Q ++ LH I L +++ Sbjct: 778 FRQQEQETEQAHQRMREAEQAYIQARATFNEQELDEVRRQRRD----LHGEISSLAEKMQ 833 Query: 429 FILSHKIKSCHTSVSITTRILQSF 452 + I + + L+ Sbjct: 834 Q-IQRAINEAEQRIQNAEQQLREL 856 >gi|209862833|ref|NP_001129488.1| amyloid beta A4 protein isoform d [Homo sapiens] gi|194380694|dbj|BAG58500.1| unnamed protein product [Homo sapiens] Length = 746 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S+IP +A + T D E Sbjct: 317 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 376 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 377 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 434 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 435 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 494 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 495 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 526 >gi|114640309|ref|XP_522179.2| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] Length = 437 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 19/215 (8%), Positives = 59/215 (27%), Gaps = 11/215 (5%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 H + T + + D R +P E + + Q + E +I ++ + + Sbjct: 8 HFVEGTDSALSRDWRPGSPGTYLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGS 67 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 ++L ++ + + + + + Sbjct: 68 LPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQSMEENQDLKKELLKCKQEARNLQ 122 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITR 426 + QQ + Q L+ + + + + + ++ + + + Sbjct: 123 GIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKE 180 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + ++ + R L +Y L+R Sbjct: 181 LGQK-DRLLQQHQAKLEEALRKLSDVSYHQVDLER 214 >gi|108804744|ref|YP_644681.1| DNA polymerase III subunit alpha [Rubrobacter xylanophilus DSM 9941] gi|108765987|gb|ABG04869.1| DNA polymerase III, alpha subunit [Rubrobacter xylanophilus DSM 9941] Length = 1084 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 34 HVCVRGEISGYRGIH-SSGH--AYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIG 90 V V G I + SGH + ++D + A +++ + L G FL+ G Sbjct: 973 RVRVAGLIECLQHPPTRSGHPVWFLLIEDERGLLQATVFRRVYGRYGDLLHHGGAFLLEG 1032 Query: 91 KITTFPGSSKYQIIIESLI 109 ++ P + ++E + Sbjct: 1033 RVEQSPRRG-FAFLVERVE 1050 >gi|319637793|ref|ZP_07992559.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102] gi|317400948|gb|EFV81603.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102] Length = 1161 Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|332283756|ref|YP_004415667.1| DNA polymerase III subunit alpha [Pusillimonas sp. T7-7] gi|330427709|gb|AEC19043.1| DNA polymerase III subunit alpha [Pusillimonas sp. T7-7] Length = 1163 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 7/98 (7%) Query: 28 VESNLSHVCVRGEISGYRGI--HSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85 +E++ S G +S R Y L D ++++ I+ + +E Sbjct: 989 LEASRSLQWFAGVLSSLRPKMTRRGKMLYALLDDGSAQVEVAIFNELYEQHRNRLKEDQL 1048 Query: 86 FLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKR 123 ++ GK++ S ++ + + L A E R Sbjct: 1049 VIIHGKVSNDDYSGGLRVSADEIF-----DLQLAREAR 1081 >gi|331681789|ref|ZP_08382422.1| ATP-dependent dsDNA exonuclease [Escherichia coli H299] gi|331080991|gb|EGI52156.1| ATP-dependent dsDNA exonuclease [Escherichia coli H299] Length = 1047 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|301762800|ref|XP_002916827.1| PREDICTED: liprin-alpha-2-like, partial [Ailuropoda melanoleuca] Length = 1225 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 132 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 189 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 190 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 249 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 250 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 308 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 309 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 368 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 369 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 411 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 412 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 465 >gi|194892993|ref|XP_001977785.1| GG18048 [Drosophila erecta] gi|190649434|gb|EDV46712.1| GG18048 [Drosophila erecta] Length = 1060 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 15/182 (8%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + V + N E + + K +L N Q + R+ + Sbjct: 679 DRKVYDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQA 738 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ----IVKQH 387 ++ RK H H Q+ R + +K+Q ++Q ++K H Sbjct: 739 QKQYIELEMRKFKRKRMIMQH----------EHEDQQLRDELEKKEQQLQQAHAMLLKHH 788 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-SCHTSVSITT 446 + LE +++ ++ + EQ + + + + RI+ L K Sbjct: 789 EKTQELEYRQQKSVHQLREEQINKQHDTELHNQEDYMERIKKELERKHAVELRQQPKSLK 848 Query: 447 RI 448 + Sbjct: 849 QK 850 >gi|145526581|ref|XP_001449096.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124416673|emb|CAK81699.1| unnamed protein product [Paramecium tetraurelia] Length = 573 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 15/162 (9%), Positives = 50/162 (30%), Gaps = 1/162 (0%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + L + L + L ++ + LE + Sbjct: 154 QEKYLEELQQQNHVLRQKLQVKKQKLASLRDQLKQGETVFEQQGQSFGKELERVQQLCEE 213 Query: 349 HFNHI-INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 N I ++ L +++++ + K ++ + + +++ L + Sbjct: 214 FSNEIKNQEQQNRGLEVELEQSKNDLAHKMSRLDILNNYDQQQQIEGLNQQLNYLKSQLD 273 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 Q + + K + +L ++ +S + +L Sbjct: 274 QANEKQEVTQVQLAKAEKNQQRLLQNQEVEIEKRLSQQSNLL 315 >gi|296471447|gb|DAA13562.1| CDC42 binding protein kinase gamma (DMPK-like) [Bos taurus] Length = 1417 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 27/245 (11%), Positives = 68/245 (27%), Gaps = 29/245 (11%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK-YRHFNHIINRI 357 ++ + L+ + L + S+ RL+ RE E N E I + ++R Sbjct: 634 RLQEENRRLSQEQERLMEELEREQQSKQRLEGERRETESNWEAQIADILSWVNDEKVSRG 693 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 L + + + + ++ ++ A + + + Sbjct: 694 YLQALATKMAEELESLRNVGTQTLPSRPLDHQWKARRLQKMEASARLELQSA---LEAEI 750 Query: 418 THIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYKNTL-----KRG---YTSIQDT 468 + L R+ ++ + + + Q+ TL RG Sbjct: 751 RAKQGLQERLTQAQEAQL-RAESRLQEAEKRHQALQQELATLREELRARGPPD----TKP 805 Query: 469 NNNFI---------TQKRNL-ATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNK 518 +N+ I +N + + + +G+ + + P T Sbjct: 806 SNSLIPFLSFRGSEDSAKNAGTSGEALELR-PEGRRSLRLGAVFPRTPAATTPPAESPPA 864 Query: 519 REKQG 523 + Sbjct: 865 KPGSH 869 >gi|293115446|ref|ZP_05791529.2| HD domain protein [Butyrivibrio crossotus DSM 2876] gi|292809736|gb|EFF68941.1| HD domain protein [Butyrivibrio crossotus DSM 2876] Length = 322 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 2/51 (3%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIII 105 +L+D +D IW I E G L+ G +T F + Q+ + Sbjct: 42 LTLQDKTGNLDGKIWNPNSPGIRDDFESGDYILLNGDVTVF--NGALQLNV 90 >gi|281348462|gb|EFB24046.1| hypothetical protein PANDA_005977 [Ailuropoda melanoleuca] Length = 713 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 48/161 (29%), Gaps = 10/161 (6%) Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + N L S + + + + F I ++ Sbjct: 386 YVNRLQNNPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQ 445 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITR 426 RQ I E + +I+++ R ++ ++ + L +L R Sbjct: 446 QRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQR 505 Query: 427 IEFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + + + ++L++ + +T+ R Sbjct: 506 MSALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 545 >gi|296221156|ref|XP_002756625.1| PREDICTED: STE20-like serine/threonine-protein kinase isoform 2 [Callithrix jacchus] Length = 1206 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 886 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNILKNRKKEEQEFVQKQQQELDGS 945 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 946 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1002 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1003 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1042 >gi|296412224|ref|XP_002835825.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629620|emb|CAZ79982.1| unnamed protein product [Tuber melanosporum] Length = 491 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 92/317 (29%), Gaps = 23/317 (7%) Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLE-EGLFSD--------QHKNPIPFIPKIIAVITS 153 + + + G G + E + + E F N + Sbjct: 177 LRLTVVDTPGFGDFVDNDESWRPIVDNIEQRFDAYLEAENKVNRMNIVDNRVHACVYFIQ 236 Query: 154 PTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIII 213 PTG ++ + + R +V + PV + D E + + + I Sbjct: 237 PTGHALKPLDIEVMRRLHTKVNLIPVIAKADTLTDEEIAEFKK--RILADIDHHKIQIFE 294 Query: 214 LARGGGSIEDLWHFNDEMIV---RAIANSSIPIISAIGHET-----DWTLA--DYAADLR 263 R ++ N+E++ A+ ++ + +A G + W + D Sbjct: 295 GPRYELDDDETIAENNEIMSKVPFAVVGANSEVTNADGRKVRGRRYPWGIIEVDNEEHCD 354 Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + ++ E ++ + + + ++ + ++ + Sbjct: 355 FVKLRQMLIRTHMEELKEHTNNFLYENYRSDKLTAMGVAQDPSVFKEVNPAVKQEEERTL 414 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQHIE 381 +L ++ E++ + + K + + +Q+ R + EK+ +E Sbjct: 415 HEQKLAKMETEMKMVFQQKVAEKESKLRQSEQELYDRHRDMKEQLQRQRSELEEKKSRVE 474 Query: 382 QIVKQHLRYIFLEKKEK 398 + + Sbjct: 475 SGRPLEEKGKRKGFSLR 491 >gi|291404781|ref|XP_002718768.1| PREDICTED: serine/threonine kinase 2 isoform 2 [Oryctolagus cuniculus] Length = 1210 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 890 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNILKNRKKEEQEFVQKQQQELDGS 949 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 950 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1006 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1007 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1046 >gi|237809004|ref|YP_002893444.1| recombination and repair protein [Tolumonas auensis DSM 9187] gi|237501265|gb|ACQ93858.1| DNA repair protein RecN [Tolumonas auensis DSM 9187] Length = 555 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 62/182 (34%), Gaps = 6/182 (3%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + L + + +++ + K+ L + L N Q L ++ +++ EL Sbjct: 226 DSQFCLQLLHDGDDITIGTLMQNVLDKLEQLGEMDPLLKNVAQMLQDAKIQIEESHYELR 285 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 L+ + R K+ L + + EK + + Q +++ Sbjct: 286 SYLDNLDIDPTRFIEVENRLSKTMELARKHHVKPEELAEKHRQLRQELQELGAA-----D 340 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-AYK 455 E++ L +Q ++ + R LS +I + +++ L+ + Sbjct: 341 ERLQELATALQQARDEYLDAAQKLSASRKRYAAELSQQITEQISQLNMPDGRLEIVFHPQ 400 Query: 456 NT 457 T Sbjct: 401 ET 402 >gi|237832319|ref|XP_002365457.1| trichohyalin, putative [Toxoplasma gondii ME49] gi|211963121|gb|EEA98316.1| trichohyalin, putative [Toxoplasma gondii ME49] Length = 394 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 21/183 (11%), Positives = 61/183 (33%), Gaps = 8/183 (4%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 + + ++A L + + + + L + Q + + + E L+ Sbjct: 179 NRIEGIQANLQKKMQSAEERRNQLRAQEKERLAKALQQIEKVQGKNRLEEEEKSIRLQEK 238 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + ++ +S ++ R+ IL ++ +E+ K + L + K I+ Sbjct: 239 LEEAEKRRKQLLEE-ESTRRKQKWEEKREIILAREMEMEEKKKSLEERVELAIERKHKII 297 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-------AYK 455 + + +I + + T +E L + ++ ++ + Sbjct: 298 EETKLTLQKKITEAEEQVSRNRTEMERRLQELAEKMSQKQEKAEQLRETLMKKKKSASPS 357 Query: 456 NTL 458 TL Sbjct: 358 ATL 360 >gi|146416659|ref|XP_001484299.1| hypothetical protein PGUG_03680 [Meyerozyma guilliermondii ATCC 6260] Length = 321 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 9/209 (4%) Query: 247 IGHETDWTLADYAADL-----RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 I E + + D AP P + + + +L+ + R I Sbjct: 28 INPECYHNICESCVDRIFSLGPAPCPYPKCGKILRKNKFKKQVFDDLKIEKEVDLRRRIS 87 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 N L + L ++ L L + +++ + ++I Sbjct: 88 AIYNKTEDDFDDLKEYNLYLEH----VETLVFNLINGVDVEATEQEIKKYEQDHKIDILE 143 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 + + + + Q+ +E++ ++ L+ + E + ++ +R+ + Sbjct: 144 INMRESQKTSDLEKYQEAMERMKQEKLKIQHQMELEDLEYQKQQKQSLLDRLSSSNIDSD 203 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQ 450 ++I + ++ ++ + T L+ Sbjct: 204 EIIAQNNSRVNKRLSMRKQQLQQITSQLE 232 >gi|324021736|ref|NP_001191231.1| amyloid beta A4 protein isoform i precursor [Homo sapiens] Length = 733 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S+IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|41406055|ref|NP_958816.1| amyloid beta A4 protein isoform b precursor [Homo sapiens] gi|28721|emb|CAA30050.1| amyloid A4 protein [Homo sapiens] gi|41350939|gb|AAH65529.1| Amyloid beta (A4) precursor protein [Homo sapiens] gi|119630363|gb|EAX09958.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease), isoform CRA_b [Homo sapiens] gi|119630368|gb|EAX09963.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease), isoform CRA_b [Homo sapiens] gi|190692067|gb|ACE87808.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease) protein [synthetic construct] gi|254071445|gb|ACT64482.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease) protein [synthetic construct] gi|225936|prf||1403400A amyloid protein A4 Length = 751 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S+IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|331656449|ref|ZP_08357411.1| exonuclease SbcC [Escherichia coli TA206] gi|331054697|gb|EGI26706.1| exonuclease SbcC [Escherichia coli TA206] Length = 1047 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEGSRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 HN-----IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSTALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|291387405|ref|XP_002710280.1| PREDICTED: kinesin family member 20A [Oryctolagus cuniculus] Length = 890 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 48/167 (28%), Gaps = 9/167 (5%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 ++E + + + L + L D + E+ ++ Sbjct: 546 DDIENEADISVYGKEELLQVVEAMKALLLKERQEKLQLEMQLRDEICNEMVEQMQQREQW 605 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 H + ++ + + + ++ + ++ ++ +E A+L Sbjct: 606 CSEHLDTQKELLE--------EMYEEKLKILKESLTSFYQEEIQERDERIEELEALLQEA 657 Query: 406 REQTKNRIFYLHTHIKKLITRI-EFILSHKIKSCHTSVSITTRILQS 451 R+Q + R+ + +++ T + L S Sbjct: 658 RQQPVANQQSGSELSLRRSQRLAASASTQQLQEVKTKLEQCKAELHS 704 >gi|224087547|ref|XP_002192527.1| PREDICTED: rho/rac guanine nucleotide exchange factor (GEF) 18 [Taeniopygia guttata] Length = 1010 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 63/197 (31%), Gaps = 7/197 (3%) Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + A E + ++ + + +++ I+ + L SL + D + Sbjct: 605 HDPSSDAEEGSQTSDGTRLDDSSGVQPTVESQLVQRIQTLLQLLFSLQAVISQQDSYIEV 664 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 R RE +H L+ N K + N+QK + + +QQ +E+ Sbjct: 665 --QRATMADREKQHRLQSTRGNLLLEQEKQRNFEKQREELMNVQKLQSQLKLEQQRLERE 722 Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + R L + ++ Q + R+ + R H ++ + Sbjct: 723 RSRQQREFELT-EARLQEHAEEMRQLQERLSQDREEL----ERQREAYQHDLERLREAQR 777 Query: 444 ITTRILQSFAYKNTLKR 460 + + LK+ Sbjct: 778 AVEKERERLDQLRKLKK 794 >gi|327202147|gb|AEA36719.1| single-stranded DNA binding protein [Periwinkle leaf yellowing phytoplasma] Length = 104 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEI+ + ++KD + I +I++ + + +G + V G ++ Sbjct: 24 EGEITKLDFSIAV-----NIKDKVNFIPCVIFRNQADNMFMYLHKGSKIYVEGSLSV 75 >gi|301784541|ref|XP_002927685.1| PREDICTED: serine/threonine-protein kinase 10-like [Ailuropoda melanoleuca] Length = 983 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 15/185 (8%), Positives = 53/185 (28%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + L + ++ + + L+K R+ L R Sbjct: 736 ICDKERECLTRKQELLRDREAALWETEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 793 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + ++ + + + ++ + +Q Sbjct: 794 KEREQMQRYNQRMVEQLKVRQQQERARLPKIQRSEGKTRMAMYKKSLHINGAGSASEQRE 853 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + CH V T+ Sbjct: 854 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMTAQCESNMSELQQLQNEKCHLLVEHETQK 913 Query: 449 LQSFA 453 L++ Sbjct: 914 LKALD 918 >gi|92112181|ref|YP_572109.1| peptidase M23B [Chromohalobacter salexigens DSM 3043] gi|91795271|gb|ABE57410.1| peptidase M23B [Chromohalobacter salexigens DSM 3043] Length = 387 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 52/152 (34%), Gaps = 5/152 (3%) Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + ++ + + L + + ++ RL+ + + + R+ Sbjct: 29 WAQDSPEEVHRQLEALGENIEQTQARLEGTRDARDEA-QRELREVETRLAETHQRLTG-- 85 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 L + Q + E ++ Q ++ R +++ L+ L + ++ + Sbjct: 86 LQREQDQLDQEVAELKKR-RQTLEIERRRQREALAKQLNALYRLGPTPQLKLLLNQSDPA 144 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 +L R++ L+H ++ + ++ Sbjct: 145 RL-DRLQQYLNHLNQARQQRLDALAKLEDQLD 175 >gi|222099403|ref|YP_002533971.1| Metal dependent phosphohydrolase [Thermotoga neapolitana DSM 4359] gi|221571793|gb|ACM22605.1| Metal dependent phosphohydrolase [Thermotoga neapolitana DSM 4359] Length = 340 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 +L+D + A+ W + +EG V G++ F QI +E+ Sbjct: 55 MTLEDRTGAVRAVDW-YNAELNDQRLKEGSVVKVKGRVVFFENR--IQINVEN 104 >gi|3892157|emb|CAA10033.1| DYS-1 protein [Caenorhabditis elegans] Length = 3674 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 16/191 (8%), Positives = 57/191 (29%), Gaps = 10/191 (5%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 L + P + + + A + + L K P Sbjct: 3381 GYLPIDVAEEGIPLTCPPAKVTNQATEQMNADTSQMTAHLAKLSAEHGGGAEHMEPVQSP 3440 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 ++++ + ++ ++ R + ++ + I + Sbjct: 3441 L-----QIINQVEQLQRDEMDQMLHRLQFENKQLRKELEW----KRGAASTMEIDRSSKR 3491 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + R L + +++ + Q++N + ++ R+E S ++ + Sbjct: 3492 HQERHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHR-SRILEQQN 3550 Query: 440 TSVSITTRILQ 450 + + + L+ Sbjct: 3551 EQLEMQLQRLK 3561 >gi|194909438|ref|XP_001981946.1| GG11315 [Drosophila erecta] gi|190656584|gb|EDV53816.1| GG11315 [Drosophila erecta] Length = 1951 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 33/338 (9%), Positives = 93/338 (27%), Gaps = 26/338 (7%) Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRV 174 L A + + + + + + + +II SP +LQ+ R L V Sbjct: 928 ALSEANFQLGGDISAQDIVDGHREKTLSLLWQIIYKFRSPKFHAAATVLQKWWRRRWLHV 987 Query: 175 I----IFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDE 230 I I ++ + A+ + + +++ + A + + F Sbjct: 988 IIQRRIRHKELMRRHRAATVIQAVFRGHQMRKYVK------LFRAERTQAAIIMQKFTRR 1041 Query: 231 MIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEA 290 + + S I I + E Q+++ Sbjct: 1042 YLAQKQLYHSYHSIVTIQ-------------RWWRAQQLGRQYRQRFLELRQAAIFLQRI 1088 Query: 291 RLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF 350 + + + T + + ++R +L + Sbjct: 1089 WRRRLFAKKLLAAAETARLQRSQKQQAAASYIQVQWRSHQLGKLQRQKFLRQRDLIMFVQ 1148 Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ--IVKQHLRYIFLEKKEKIAILHMLREQ 408 + ++ Q+ ++ + QQ +++ + + + R Sbjct: 1149 RRMRSKWIMLKQQKEFQQLKRAAINVQQRWRAKLSMRKCNADYLALRSSVLKVQAYRRAT 1208 Query: 409 TKNRIFYLHTH-IKKLITRIEFILSHKIKSCHTSVSIT 445 + R+ H ++K + R++ + +K + Sbjct: 1209 IQMRMDRNHYCSLRKNVIRLQQRMRATMKMREQRQNYL 1246 >gi|158260637|dbj|BAF82496.1| unnamed protein product [Homo sapiens] Length = 472 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 17/203 (8%), Positives = 54/203 (26%), Gaps = 11/203 (5%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D R +P E + + Q + E +I ++ + + Sbjct: 55 DWRPGSPGTYLETSWEEQLLEQQEYLEREMEEAKKMISGLQALLLNGSLPEDEQERPLAL 114 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++L ++ + + + + + + QQ + Sbjct: 115 CEPGVNPEEQL-----IIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRL 167 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 Q L+ + + + + + ++ + + + + ++ Sbjct: 168 TQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQH 226 Query: 439 HTSVSITTRILQSFAYKNT-LKR 460 + R L +Y L+R Sbjct: 227 QAKLEEALRKLSDVSYHQVDLER 249 >gi|55153744|gb|AAH85224.1| LOC495519 protein [Xenopus laevis] Length = 525 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 15/203 (7%), Positives = 49/203 (24%), Gaps = 1/203 (0%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + A + + L +++ + + S+ + Sbjct: 93 FCTYCVLSPVPAAKSCLLCEASLCDTHLRGHSKSAEHVLTQPTDSFMERKCSVHNKVLEY 152 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN-IQKNRQHILEK 376 H +E++ + + ++ ++ Q + E+ Sbjct: 153 YCCEDSVCVSCCLAGEHRGHRVELLSEASEKKKEKLRKVLEKLRPKREETERGAQRLQER 212 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 ++ + + + ++ L L Q I + +T + L K Sbjct: 213 RREVAEKAAGETERVTALFRDIREQLEALERQVLRDISRQKEKLSLTLTNLIHQLEIKKD 272 Query: 437 SCHTSVSITTRILQSFAYKNTLK 459 + + L+ Sbjct: 273 ELSRKIRHIEELCNMADPLTVLQ 295 >gi|227530553|ref|ZP_03960602.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus vaginalis ATCC 49540] gi|227349559|gb|EEJ39850.1| SMC structural maintenance of chromosomes partitioning protein [Lactobacillus vaginalis ATCC 49540] Length = 1187 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 20/185 (10%), Positives = 60/185 (32%), Gaps = 20/185 (10%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + + + + L S + + L + D + E ++ + Sbjct: 718 QTQLHQASEQLHSATGQQQVLQSQRQTIERQVFALKFQSGQQDDQHADYEQKVQQNTQQL 777 Query: 347 YRHFNHI-INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 N+ ++ L I++ + + Q + Q+ + + E+ +++ Sbjct: 778 KDAQQQFDANKHRTGELQEQIKQLQSDESAQSQQLHQMEQWI--AVAQERLQQLKSSRHA 835 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSH-----------------KIKSCHTSVSITTRI 448 +Q KN + H+++ I R+ +++ ++ + + T Sbjct: 836 LQQEKNSLQINADHLEQQIHRLNLQINNDHADDESNETALQDATQQLTTVKQQLVTTKEK 895 Query: 449 LQSFA 453 L S + Sbjct: 896 LNSLS 900 >gi|161018581|emb|CAK02139.1| exodeoxyribonuclease VII large subunit (fragment) [Bartonella tribocorum CIP 105476] Length = 81 Score = 39.7 bits (91), Expect = 1.3, Method: Composition-based stats. Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 12/79 (15%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK------ITTFPGSSKYQIIIESL 108 F+LKD+ +++ +I G+ KI+ + GK IT F SSKYQI IE+L Sbjct: 9 FALKDDEMQLEGVIVMGSDVKIQISSS------IRGKNDQFRQITIFLRSSKYQIFIEAL 62 Query: 109 IPSGSGTLLTALEKRKKKL 127 +G G L T K KK++ Sbjct: 63 EATGVGVLATLFIKSKKEI 81 >gi|215485281|ref|YP_002327712.1| hypothetical protein E2348C_0120 [Escherichia coli O127:H6 str. E2348/69] gi|312966245|ref|ZP_07780471.1| uncharacterized protein yacH [Escherichia coli 2362-75] gi|215263353|emb|CAS07668.1| predicted protein [Escherichia coli O127:H6 str. E2348/69] gi|312289488|gb|EFR17382.1| uncharacterized protein yacH [Escherichia coli 2362-75] Length = 617 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 23/188 (12%), Positives = 50/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + ++ P + Sbjct: 430 AAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAAREKMQTNPQNQ 489 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370 Q +R R+ P E + + + + RI+S + R Sbjct: 490 QRREAARQRIQSAPPEQRQAVREKMQTNPQNQQRREAARQRIQSASPEQRQVFKEKVQQR 549 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH-THIKKLITRIEF 429 E++ + Q V+ +EK+ R NR L+ + R+ Sbjct: 550 PLNQEQRDNARQRVQSASPEQRPFFREKVQESRPQRLNDSNRTARLNNEQRSTVRERLSE 609 Query: 430 ILSHKIKS 437 + +++ Sbjct: 610 RGARRLER 617 Score = 36.7 bits (83), Expect = 9.2, Method: Composition-based stats. Identities = 7/134 (5%), Positives = 30/134 (22%), Gaps = 5/134 (3%) Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 + R P +++ H + +Q +Q + Sbjct: 410 QFQQRTHTAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQRYQS 469 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + + + + + + + +++ + Sbjct: 470 ASPEQRQAAREKMQTNPQNQQRREAARQRIQSAPPEQRQAVREKMQTNPQN-----QQRR 524 Query: 443 SITTRILQSFAYKN 456 + +QS + + Sbjct: 525 EAARQRIQSASPEQ 538 >gi|17506447|ref|NP_492946.1| DYStrophin related family member (dys-1) [Caenorhabditis elegans] gi|55584033|sp|Q9TW65|DMD_CAEEL RecName: Full=Dystrophin-1 gi|14530423|emb|CAB61012.2| C. elegans protein F15D3.1a, confirmed by transcript evidence [Caenorhabditis elegans] gi|14530444|emb|CAB61005.2| C. elegans protein F15D3.1a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 3674 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 16/191 (8%), Positives = 57/191 (29%), Gaps = 10/191 (5%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 L + P + + + A + + L K P Sbjct: 3381 GYLPIDVAEEGIPLTCPPAKVTNQATEQMNADTSQMTAHLAKLSAEHGGGAEHMEPVQSP 3440 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 ++++ + ++ ++ R + ++ + I + Sbjct: 3441 L-----QIINQVEQLQRDEMDQMLHRLQFENKQLRKELEW----KRGAASTMEIDRSSKR 3491 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + R L + +++ + Q++N + ++ R+E S ++ + Sbjct: 3492 HQERHQSESRGGTLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHR-SRILEQQN 3550 Query: 440 TSVSITTRILQ 450 + + + L+ Sbjct: 3551 EQLEMQLQRLK 3561 >gi|71018319|ref|XP_759390.1| hypothetical protein UM03243.1 [Ustilago maydis 521] gi|46099115|gb|EAK84348.1| hypothetical protein UM03243.1 [Ustilago maydis 521] Length = 1168 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 41/131 (31%), Gaps = 5/131 (3%) Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R RE E ++ R+ +++ L H RQ I Q + I Sbjct: 726 RRIGVDNIREYEERQVRLMQRQSDAKLQYESQLAR--LNHQANFERQQIENTQDRLNNIR 783 Query: 385 KQ--HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + R + + + I + + + +L T+ ++ T + Sbjct: 784 EAIARERNKLTSWQAQKQGKQQELDGMLEEISEMQSQLSELQTQ-NEAKKATLEEKRTEL 842 Query: 443 SITTRILQSFA 453 R+L S + Sbjct: 843 HKAARLLDSLS 853 >gi|308235863|ref|ZP_07666600.1| Single-strand DNA-binding protein [Gardnerella vaginalis ATCC 14018] gi|311115042|ref|YP_003986263.1| single-strand binding protein [Gardnerella vaginalis ATCC 14019] gi|310946536|gb|ADP39240.1| single-strand binding protein [Gardnerella vaginalis ATCC 14019] Length = 213 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 7/57 (12%), Positives = 19/57 (33%), Gaps = 8/57 (14%) Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF------PGSSKYQIIIESLIPS 111 + + W +G+ +V G++ + ++I+ + PS Sbjct: 54 SLRCVAWGDLAEHCAQTLTKGMRVIVQGRLRANNYVDKNSNEKRYSIDLMIDEIGPS 110 >gi|16550741|dbj|BAB71039.1| unnamed protein product [Homo sapiens] Length = 437 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 18/187 (9%), Positives = 48/187 (25%), Gaps = 14/187 (7%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 29 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 88 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + L+++ + L+ L Sbjct: 89 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIKDALQQRSTQQDTSVLQLKQELLR 148 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 LH + ++ + + + + ++ + R L +Y Sbjct: 149 ANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDVSY 207 Query: 455 KNT-LKR 460 L+R Sbjct: 208 HQVDLER 214 >gi|325206603|gb|ADZ02056.1| chromosome segregation protein SMC [Neisseria meningitidis M04-240196] Length = 1161 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|119617780|gb|EAW97374.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2, isoform CRA_a [Homo sapiens] Length = 1210 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|15789944|ref|NP_279768.1| hypothetical protein VNG0779C [Halobacterium sp. NRC-1] gi|10580354|gb|AAG19248.1| conserved hypothetical protein [Halobacterium sp. NRC-1] Length = 604 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 6/113 (5%) Query: 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 V + GE+ + G F ++D S I ++ + E G V G Sbjct: 120 DTVHIEGEVVQIKQTA--GPTVFRVRDETSAIPCTAFEDAGVRAHPGVEVGDIVHVSGDA 177 Query: 93 TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145 Q+ +++ G + L E+ + + P Sbjct: 178 D--DREGTTQLEVDAFEVLSGGDSADVARRLDAALAEQA--DPVDVDALVDWP 226 >gi|197100263|ref|NP_001127346.1| liprin-alpha-2 [Pongo abelii] gi|55728290|emb|CAH90890.1| hypothetical protein [Pongo abelii] Length = 1186 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 90 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 147 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 148 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 207 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 208 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 266 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 267 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 326 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 327 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 369 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 370 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 423 >gi|307152963|ref|YP_003888347.1| hypothetical protein Cyan7822_3117 [Cyanothece sp. PCC 7822] gi|306983191|gb|ADN15072.1| hypothetical protein Cyan7822_3117 [Cyanothece sp. PCC 7822] Length = 933 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 16/163 (9%), Positives = 50/163 (30%), Gaps = 6/163 (3%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 ++ L+ + + L + D +LE I + I Sbjct: 32 KEQLEQAKQALDEAEADVQDKQSLLRELQQGQDNQKVQLEAIYSEQIRELEAEYQAKIKD 91 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 ++ ++ ++ E + ++ ++ + E++ Q++ + L Sbjct: 92 LE------QSPVDQPNLEEIKAQLQAEIEASYQTTITERESSYQAKIEEILQSQREVQDL 145 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 + ++E +I+ S + L+ + L+ Sbjct: 146 ERLKAEFQEQLEQSYRGQIEEIEQSYQAQIQQLKDLHQEEILQ 188 >gi|255572862|ref|XP_002527363.1| ATP binding protein, putative [Ricinus communis] gi|223533282|gb|EEF35035.1| ATP binding protein, putative [Ricinus communis] Length = 1031 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 22/180 (12%), Positives = 41/180 (22%), Gaps = 6/180 (3%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 N + +K + K L + L L+ I Sbjct: 822 QYKVNELENRMKERAQEFEIHSKMLQQKIRELENKLTMERDYSDPRL--LQQKIKVLEEK 879 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 L + I + + + R + + +L+ Sbjct: 880 LREHEQGECISKLWSAEKLGATPIQTTSSRLGDVDSSNRRSLSASNRSMNQGSLLLKGPD 939 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 R I T F+L+ + TS S L+ L R ++ Sbjct: 940 SLREVRRKRDIPSKGTENNFLLATSLLEKKTS-SPQISKLRHLDPSKVLSR---ITRNAK 995 >gi|301784543|ref|XP_002927689.1| PREDICTED: cytoskeleton-associated protein 4-like [Ailuropoda melanoleuca] Length = 637 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 4/134 (2%) Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L + +L L+ + K + +R+ + I +Q+ +H+ + Sbjct: 367 LKQEQQKLKEAANSEHLTLQA-LTEKLLQSEEVTSRLPEE--IRKLQEELRHLETEALRA 423 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 E+ E +EK L + ++ + + T + +E +L+ ++ Sbjct: 424 EEDGVYKHSASLAELQEKSQGLDSRLQSVEDGVDAVQTASARHSENLEALLARSVEQ-EQ 482 Query: 441 SVSITTRILQSFAY 454 ++ + Sbjct: 483 RLAALQERVAGLGP 496 >gi|254804429|ref|YP_003082650.1| chromosome segregation protein [Neisseria meningitidis alpha14] gi|254667971|emb|CBA04250.1| chromosome segregation protein [Neisseria meningitidis alpha14] Length = 1161 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|194765787|ref|XP_001965007.1| GF23109 [Drosophila ananassae] gi|190617617|gb|EDV33141.1| GF23109 [Drosophila ananassae] Length = 690 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 63/214 (29%), Gaps = 13/214 (6%) Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 + + PV L+ + I K+ L L + + ++ Sbjct: 211 NSPAVSRSSSPVLRMSTMRYAQLKCQHQEIRRSYNLDKVLLLQHLQRLHQQRQKQMAVVT 270 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHF--NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 + RL + E+ + + +H N + + +Q I + Q Sbjct: 271 REIARLSVQCVTKNELRLKPRTTSMSGDHAANHHSMGRTLSVLLAEQQLIAPLTLYNAQ- 329 Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 HL + + +L RE + R ++ L + L ++ + Sbjct: 330 ---HLTRRIETLRSQQRLLQAERETFRQRNERARQRLEDLREQ-REALQKQLHGQRYRLE 385 Query: 444 ITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 L+S A ++ +R D I Q Sbjct: 386 QERLELRSVAPQHIAQR------DQRRQIIRQVE 413 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 21/194 (10%), Positives = 53/194 (27%), Gaps = 21/194 (10%) Query: 264 APTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC 323 + + V Q + L + R I+ + L Q Sbjct: 299 HAANHHSMGRTLSVLLAEQQLIAPLTLYNAQHLTRRIETLRSQQRLLQAERETFRQRNER 358 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 +R RL+ L E L+ + + ++S H Q++++ Sbjct: 359 ARQRLEDLR-EQREALQKQLHGQRYRLEQERLELRSVAPQHIAQRDQR------------ 405 Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 R I + + +++ L + ++ N + + Sbjct: 406 -----RQIIRQVERRMSTLVLELQEIYNVQSEGGQQFSICGIAFPH-MEQYTSESRQ--A 457 Query: 444 ITTRILQSFAYKNT 457 ++L++ + Sbjct: 458 ANAQLLENVSPLAV 471 >gi|186683312|ref|YP_001866508.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC 73102] gi|186465764|gb|ACC81565.1| peptidase S1 and S6, chymotrypsin/Hap [Nostoc punctiforme PCC 73102] Length = 388 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 3/72 (4%) Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHN 516 L G+ D N +T ++ + ++F DG+ V+ K + + N Sbjct: 162 LGSGFVI--DPNGRILTNAHVVSDADTVTVSFSDGRTVEGKVLGKDAVSDVAVVQIPGTN 219 Query: 517 NKREKQGTQGEL 528 + L Sbjct: 220 LPTVEIANSDTL 231 >gi|325133939|gb|EGC56595.1| chromosome segregation protein SMC [Neisseria meningitidis M13399] Length = 1161 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|316985405|gb|EFV64353.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76] gi|325200767|gb|ADY96222.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76] Length = 1161 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|301764443|ref|XP_002917641.1| PREDICTED: dystrobrevin alpha-like [Ailuropoda melanoleuca] Length = 743 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 48/161 (29%), Gaps = 10/161 (6%) Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + N L S + + + + F I ++ Sbjct: 412 YVNRLQNNPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQ 471 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITR 426 RQ I E + +I+++ R ++ ++ + L +L R Sbjct: 472 QRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQR 531 Query: 427 IEFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + + + ++L++ + +T+ R Sbjct: 532 MSALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|325674331|ref|ZP_08154020.1| single-strand binding protein [Rhodococcus equi ATCC 33707] gi|325555011|gb|EGD24684.1| single-strand binding protein [Rhodococcus equi ATCC 33707] Length = 161 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109 KD + + IW+ + G +V G++ ++ + ++ ++ + Sbjct: 48 KDGDALFLRCTIWREAAENVAETLTRGTRVIVSGRLKQRSYETREGEKRTVVELEVDEIG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|119630362|gb|EAX09957.1| amyloid beta (A4) precursor protein (peptidase nexin-II, Alzheimer disease), isoform CRA_a [Homo sapiens] Length = 563 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S+IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|73961742|ref|XP_547610.2| PREDICTED: similar to dystrobrevin alpha isoform 1 [Canis familiaris] Length = 797 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 48/161 (29%), Gaps = 10/161 (6%) Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + N L S + + + + F I ++ Sbjct: 412 YVNRLRNNPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQ 471 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITR 426 RQ I E + +I+++ R ++ ++ + L +L R Sbjct: 472 QRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQR 531 Query: 427 IEFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + + + ++L++ + +T+ R Sbjct: 532 MSALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|107102640|ref|ZP_01366558.1| hypothetical protein PaerPA_01003704 [Pseudomonas aeruginosa PACS2] Length = 459 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 19/220 (8%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + A +MA + + + + + + Sbjct: 139 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAPPAEPPRKQEDEQTARLAQLVKQQRQQL 198 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 RL L R+ E L + + + + L +++ + E Q Sbjct: 199 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 256 Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422 Q + + +Q R ++ + L + + + Sbjct: 257 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAAAVAGYKEQVSI 316 Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + L +++ + L + + L+R Sbjct: 317 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 356 >gi|83859548|ref|ZP_00953068.1| tetratricopeptide repeat family protein [Oceanicaulis alexandrii HTCC2633] gi|83851907|gb|EAP89761.1| tetratricopeptide repeat family protein [Oceanicaulis alexandrii HTCC2633] Length = 1048 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 63/236 (26%), Gaps = 12/236 (5%) Query: 217 GGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRA---PTPTGAAEM 273 G G+ D S + T D A + E Sbjct: 150 GPGAGADPAALKSVETTVGKLASRLYETER----DVRTELDNLAHKEERRRDSAERGLEK 205 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 E + +L + L +++ + + L+ L + + + R Sbjct: 206 LGQRLEDTEKTLTDETRALRDLVETRDERTQSLLSDLQDTSRSLQSRIISAESATQRAAE 265 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE-----KQQHIEQIVKQHL 388 L + E + R + + N +K + + I + + + + + QI + Sbjct: 266 ALAGSQEKLDARLRQLESLQSNALKEEDVQRRIDALAREVADVIRDTRSECARQIAEVTR 325 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 + +A + R I + R+ + ++ + Sbjct: 326 NADGPRLERALAEAETRLRAAEQRQSDSLQRIGAEVARLARAVDQRLDRSEQRLQR 381 >gi|195049641|ref|XP_001992758.1| GH24042 [Drosophila grimshawi] gi|193893599|gb|EDV92465.1| GH24042 [Drosophila grimshawi] Length = 503 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 21/197 (10%), Positives = 54/197 (27%), Gaps = 2/197 (1%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 + A+ + Q + E L + +L + + Sbjct: 126 MKHLQFENHSKLGEVRAEAMTQLKVAQEHHMLQELELQSDKRQLRRMVRERIEMSDMQHR 185 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + + L +++ + K + + + + ++ Q I + Sbjct: 186 QLEAHFNQQLLEQRLLFENESNDMNRLHEEKMKEQRMKLELFFNSQMFEVEERKNQQIKD 245 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN--RIFYLHTHIKKLITRIEFILSH 433 Q H + Y +A++ ++EQ + R + T L Sbjct: 246 LQDHHDLAFNDMKNYYNDITLNNLALIGSMKEQIEQLRRQSDRSDRLAAEATAETRRLKE 305 Query: 434 KIKSCHTSVSITTRILQ 450 ++ T + R L+ Sbjct: 306 PLEQAKTQLKELQRKLE 322 >gi|168270852|dbj|BAG10219.1| liprin-alpha-2 [synthetic construct] Length = 1247 Score = 39.4 bits (90), Expect = 1.4, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|221044188|dbj|BAH13771.1| unnamed protein product [Homo sapiens] Length = 1104 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 11 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 68 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 69 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 128 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 129 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 187 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 188 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 247 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 248 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 290 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 291 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 344 >gi|15598287|ref|NP_251781.1| hypothetical protein PA3091 [Pseudomonas aeruginosa PAO1] gi|218890709|ref|YP_002439573.1| hypothetical protein PLES_19691 [Pseudomonas aeruginosa LESB58] gi|254236062|ref|ZP_04929385.1| hypothetical protein PACG_02020 [Pseudomonas aeruginosa C3719] gi|9949200|gb|AAG06479.1|AE004733_6 hypothetical protein PA3091 [Pseudomonas aeruginosa PAO1] gi|126167993|gb|EAZ53504.1| hypothetical protein PACG_02020 [Pseudomonas aeruginosa C3719] gi|218770932|emb|CAW26697.1| hypothetical protein PLES_19691 [Pseudomonas aeruginosa LESB58] Length = 479 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 19/220 (8%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + A +MA + + + + + + Sbjct: 159 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAPPAEPPRKQEDEQTARLAQLVKQQRQQL 218 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 RL L R+ E L + + + + L +++ + E Q Sbjct: 219 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 276 Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422 Q + + +Q R ++ + L + + + Sbjct: 277 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAAAVAGYKEQVSI 336 Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + L +++ + L + + L+R Sbjct: 337 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 376 >gi|67924353|ref|ZP_00517785.1| hypothetical protein CwatDRAFT_1493 [Crocosphaera watsonii WH 8501] gi|67853809|gb|EAM49136.1| hypothetical protein CwatDRAFT_1493 [Crocosphaera watsonii WH 8501] Length = 650 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 5/164 (3%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + L+ L Q+ + + +E + I + + I Sbjct: 156 HLETKAQEIEQNYEAQLQHLEQKYQSEIQELQQTLANSQSIEETEQRIRELQGAYQTQIE 215 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 N + Q + Q I E +Q I +I + + I ++ + L +++ Sbjct: 216 NYQVQVQELQQAQASSQSIEETEQRIREIEQAYQTQIQDLQQSHQQAVADLENAHRHQQD 275 Query: 415 YLHTHIKKLITRIEFILSHKI----KSCHTSVSITTRILQSFAY 454 + I I+ +I +S ++ Q+ + Sbjct: 276 EREEANQTQIREIQASYQAQIVELEQSHQENIQALQEQ-QAVSP 318 >gi|117926814|ref|YP_867431.1| hypothetical protein Mmc1_3540 [Magnetococcus sp. MC-1] gi|117610570|gb|ABK46025.1| conserved hypothetical protein [Magnetococcus sp. MC-1] Length = 1153 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 22/197 (11%), Positives = 60/197 (30%), Gaps = 8/197 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D A + P + + + L + + + + + N L++L + Sbjct: 469 DLTALQQLIIPAQSLLQSHTEQFQLLQKKEAQHQQHSEHLQQRMTQLQNQLHTLQQQGDL 528 Query: 317 SDQ-TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + R + D L ++L H+ ++ ++ ++ + + + H L+ Sbjct: 529 PTPERIQQLRQQRDTLWQQLLHHWSDTSPQQQHNYAALVQQADQLADARDHHGQQIHALQ 588 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 K Q Q +Q L + +Q + ++ + + Sbjct: 589 KAQTEVQHQQQLLHNHQQQGHALHQQQQQWWQQWRKLWPTSLHGLEP------QAMQRWL 642 Query: 436 KSCHTSVSITTRILQSF 452 + T + L + Sbjct: 643 EQRQTVLQNQCD-LHAL 658 >gi|325568275|ref|ZP_08144642.1| hypothetical protein HMPREF9087_0931 [Enterococcus casseliflavus ATCC 12755] gi|325158044|gb|EGC70197.1| hypothetical protein HMPREF9087_0931 [Enterococcus casseliflavus ATCC 12755] Length = 896 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 22/187 (11%), Positives = 51/187 (27%), Gaps = 7/187 (3%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328 A A + S E + +K Q L+ + Sbjct: 233 QALNEAYQENQQQLSHWGLYEEWQQMAPADTLADPQQ--VQAIKQFYQQYQQLTEEIRKK 290 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + +LE E + Y H IN + + +R+ Q+ + L Sbjct: 291 EAELDQLEQGKESDKYFFYLDHEHQINHLLQQQVTMARLADREAAANHQEAVAITELNRL 350 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 +E ++ + R+ +++L R+ +++ + Sbjct: 351 VEKRQWSRESPPLVTASIHEQTTRLLQERVQLEELEKRMM-----RLEEKAQPLQANAAR 405 Query: 449 LQSFAYK 455 L+ + Sbjct: 406 LEQQHPQ 412 >gi|322367864|ref|ZP_08042434.1| Patched family protein [Haladaptatus paucihalophilus DX253] gi|320552571|gb|EFW94215.1| Patched family protein [Haladaptatus paucihalophilus DX253] Length = 1255 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 9/177 (5%), Positives = 47/177 (26%), Gaps = 3/177 (1%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 ++ + + + + L + + R D L R Sbjct: 144 QERKENLTEWGKQLQTRSEQLNESKEELQQRGEQLKERGEELQARGEKLQQRSDELNRSK 203 Query: 336 EHNLEI--IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + + + + + ++ N K + ++ + + Sbjct: 204 QDLQQRGEELKEEGQELKQRGQTLQQRSDELNESKAQLQAKGQELQAQAKQLNESKAQLR 263 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + E++ +++ + +++ + ++ + + S+ ++ Sbjct: 264 NQSEELKQRAQELNESRAELEQRQANLEVRAQELNQT-QRELAARNESLQERRATIE 319 >gi|123428225|ref|XP_001307426.1| hypothetical protein [Trichomonas vaginalis G3] gi|121889054|gb|EAX94496.1| hypothetical protein TVAG_241820 [Trichomonas vaginalis G3] Length = 605 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 18/179 (10%), Positives = 60/179 (33%), Gaps = 5/179 (2%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328 E+ +E Q++ ++ + I L + + +K D+ L R + Sbjct: 114 KLLEIKRKQEEEFQANQRMIQEKKEKQIKALAEAERQRQLRAIKQREALDRQLEEDRQKA 173 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + ++ ++ + + + + + N Q+ R K Q + ++ Sbjct: 174 LE---KQREQVKRELYLEQKRKEQLQQIKERNAAAFNAQRQRFEASLKAQQ--EQFEKKC 228 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 + + + +E + + ++ + R + L++R ++ + + Sbjct: 229 KNLERKDQESVQRVEKTKQALQERSAQSRARSQMLVSRHLAAKERVQEARSQRIEKLAK 287 >gi|157868186|ref|XP_001682646.1| kinesin [Leishmania major strain Friedlin] gi|68126101|emb|CAJ07154.1| putative kinesin [Leishmania major strain Friedlin] Length = 1034 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 17/197 (8%), Positives = 60/197 (30%), Gaps = 6/197 (3%) Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ + D + + E L R + + ++ + Sbjct: 664 TIMELVKDKETLLLRACNGILIANSESAAILEKMLSEREDGLRDTKRLHEEELATQAERF 723 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + L + +L + + R R S+ K ++ Sbjct: 724 CERLKEALDKGAVQQQQLLDRHRDAVAQLEGRLQRSHE------ISEMERRRNDKEKEEF 777 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ Q ++ ++ + + ++ R ++++ + L ++ + R++ ++ Sbjct: 778 RQRVQLAQERMRDEYQQEIERLRARLEGDIGDRHKSRDAVRQLQEMHEREMERLKDEMNL 837 Query: 434 KIKSCHTSVSITTRILQ 450 +S + + L+ Sbjct: 838 LKRSKDSDCARLQNQLE 854 >gi|68533073|dbj|BAE06091.1| PPFIA2 variant protein [Homo sapiens] Length = 1258 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 175 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 232 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 233 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 292 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 293 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 351 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 352 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 411 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 412 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 454 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 455 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 508 >gi|327260119|ref|XP_003214883.1| PREDICTED: EF-hand calcium-binding domain-containing protein 4A-like [Anolis carolinensis] Length = 415 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 21/205 (10%), Positives = 65/205 (31%), Gaps = 10/205 (4%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E + ++ Y D++ + + +H + E I + + Sbjct: 179 ELIFRISSYLKDVQQEKESMELVLKRREIDHDREIRCLYEEMEQQIKAEREQLLCQVNSF 238 Query: 310 LLKALPNSDQTLSCSRYRLDR--LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 L + + +C+ L++ R + +I + + L + + Sbjct: 239 LTLWMKAPELKATCTSQLLNQGDKSRIVPALWGLISIEDTQRKQKNQKNLFIYSLQESTK 298 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + +L+K+ K+ L ++K+ + + + I + ++ L + Sbjct: 299 QGKSSLLQKELR----NKEQEFEKMLCHQKKLELQLQSQNSMQLEIRVQNERLQILNESL 354 Query: 428 EFILSHKIKSCHTSVSITTRILQSF 452 +++ + + LQ Sbjct: 355 LD----QLERSRWELEVAQGQLQHL 375 >gi|224044380|ref|XP_002190873.1| PREDICTED: pleckstrin homology-like domain, family B, member 2 [Taeniopygia guttata] Length = 1253 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 17/172 (9%), Positives = 56/172 (32%), Gaps = 3/172 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L +I + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELERNVIGEKTKEKLKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + Sbjct: 707 QLKRDADILDIESKHFE--DLEFQQLEHESRLDEEKENLTQQLLHEVAEYQRSIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L++Q + + + ++ ++ ++ + + + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSTLS 815 >gi|291222379|ref|XP_002731197.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 1220 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 25/191 (13%), Positives = 63/191 (32%), Gaps = 10/191 (5%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + E SL L+ + + + + L + + R L+ L Sbjct: 718 RLKQENDEIAMQSLAKLKILEQQKTDLISSHHNKIMEYEDQKLTEIGKLKALHRSTLEEL 777 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH----NIQKNRQHILEKQQHIEQIVKQH 387 ++ + + I + + + + N + + Q +E + Sbjct: 778 VKDHQLEINRIKRTHESEIDTVRGTHTHTRALQTVIDQVSANAKDLGSLQHKVESQHYSN 837 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIF---YLHTHIKKLITRIEFILS---HKIKSCHTS 441 L +E ++K L +L+++ + +++LI+R+E +S +++ Sbjct: 838 LDEREIEARQKDEQLKILQQRLSRQQEDNDRERAKLQELISRMESHMSEQAKQLEQERWR 897 Query: 442 VSITTRILQSF 452 V L S Sbjct: 898 VKQEESKLNSL 908 >gi|221633719|ref|YP_002522945.1| putative chromosome segregation protein [Thermomicrobium roseum DSM 5159] gi|221155554|gb|ACM04681.1| putative chromosome segregation protein [Thermomicrobium roseum DSM 5159] Length = 1187 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 16/169 (9%), Positives = 44/169 (26%), Gaps = 6/169 (3%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + A R + + ++L + L +L +L E + I Sbjct: 685 ARQERLAASLEEARRQFLAARDAVERARRSLESVRDQLRTQETKLVQLDHEWVQLVRSIQ 744 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + + + + E++ + + ++ ++A Sbjct: 745 RLDDALAREAESIAAVRAALARDDEQARALHEQEDALHAALDD-----LEHQRAQVADAI 799 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + L I L R E + + + + L + Sbjct: 800 ARLDTPDPEREQLLEQIATLRER-ERAGARERSQLAQRLGELRQRLAAL 847 >gi|332157642|ref|YP_004422919.1| single-stranded DNA binging protein [Chinaberry witches'-broom phytoplasma] gi|330717888|gb|AEC45511.1| single-stranded DNA binging protein [Chinaberry witches'-broom phytoplasma] Length = 104 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 39 GEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 GEIS + H KD + I ++++G + + +G + V G ++ Sbjct: 25 GEISKLDFSIAVNH-----KDKVNYIPCVVFRGLADDMFMYLHKGSKVYVEGSLSI 75 >gi|330810113|ref|YP_004354575.1| nuclease sbcCD subunit C [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378221|gb|AEA69571.1| Nuclease sbcCD subunit C [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 1213 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 61/199 (30%), Gaps = 8/199 (4%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + + E Q++L+ L+ + + ++ + L N Q Sbjct: 700 DAWLTQQNSQLNLRISQDEQRQTALLTLQQDAAR-MTQRLREAEAASQQASQHLGNQQQE 758 Query: 321 LSCSRYRLDRLPRELEHNLEI---IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 L+ R RLD L R + + + +++ R + E+ Sbjct: 759 LARDRQRLDEELSHFSALLPADTLQALRSEPAATFLQLDQQIAQRLEQLEQQRDELGEQL 818 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI----KKLITRIEFILSH 433 Q + + K+ R ++ + A L + + + + L Sbjct: 819 QRQQTLEKEQDRQQTRLQQLEAARLQFSALSEQQQACQEKLTRLLGEHTSAEQWQQQLDQ 878 Query: 434 KIKSCHTSVSITTRILQSF 452 +++ + + + LQ Sbjct: 879 RLEQTRDAEATANQQLQQL 897 >gi|300692789|ref|YP_003753784.1| methylmalonyl-CoA mutase [Ralstonia solanacearum PSI07] gi|299079849|emb|CBJ52526.1| METHYLMALONYL-COA MUTASE [Ralstonia solanacearum PSI07] Length = 1099 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 45/404 (11%), Positives = 100/404 (24%), Gaps = 30/404 (7%) Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIII---ESLIPSGSGTLLTALEKRKKKLLEEGLFS 134 + PE+G + G I + I +L P +G AL + L + Sbjct: 134 YSPEDGQRMGLAGMIADMVRRCDIDLSIYAPTTLEPVVAGD-RRALAQLITALESGRV-D 191 Query: 135 DQHKNPIPFIPKIIAV----ITSPTGAVIRDILQRISCRFPL------RVIIFPVKVQGD 184 + + +T GA + + RF L R+ + + Sbjct: 192 PALRQAVHERAAATHTPVLGVTGTGGAGKSSLTDELIRRFRLDQHDRLRIAVISIDPSRR 251 Query: 185 ECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPI- 243 + + +++N + R + R GS + RA I + Sbjct: 252 KSGGALLGDRIRMNAINHPHLFVRS---MATREAGSEISDALPDAIAACRAGGFDLIMVE 308 Query: 244 ISAIGHET--DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 S IG D + + P A+++ + + Sbjct: 309 TSGIGQGDAAIVPHVDLSLYVMTPEFGAASQLEKIDMLDFADLVAINKFDRKGAQDAWRD 368 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + + + + + + + + R Sbjct: 369 VCKQVQRNREQWHAKPEAMPVFGTQASHFNDDGVTALYHALADQLAKRGLALGERTLPRP 428 Query: 362 LIHNIQKNRQHILEKQQH--IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + + + E H + E + ++A + ++ + Sbjct: 429 PGTCSTSHDAIVPPARVRYLAEVADTVHGYHRRAEAQSRLARERQQLQASRRMLEQAGVT 488 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 L L + + R L + L+R Y Sbjct: 489 GDALA-----ALDTQAAERDARLGAAERKLLAMWPD--LRRAYA 525 >gi|188585991|ref|YP_001917536.1| chromosome segregation protein SMC [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350678|gb|ACB84948.1| chromosome segregation protein SMC [Natranaerobius thermophilus JW/NM-WN-LF] Length = 1191 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 53/153 (34%), Gaps = 3/153 (1%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + + + L N L + L +E+I R+ + + Sbjct: 340 DLDNKYESLKKEKHQVEEDLHNIKNRLDKMSQENNELENAKASLIEVISHRQRKETEYDN 399 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILHMLREQTKNR 412 + L + + + + + Q E++ + + + K+ ++ L K R Sbjct: 400 YYKEQTRLKKELDELKTEVKKLQSRQEELDNKIKQIKEQQITKQSRLDELVTKITSEKQR 459 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 I L + ++L RI L+ +++ + Sbjct: 460 IDGLESEKQQLTDRIND-LNQRLQGYKSRYEAL 491 >gi|73978155|ref|XP_532638.2| PREDICTED: similar to PTPRF interacting protein alpha 2 [Canis familiaris] Length = 1177 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 85 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 144 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 ++ I +G + + ++ + D +++L + Sbjct: 145 VHIQRKI--ASSEGSTESEHLEGMDPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 202 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 203 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 261 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 262 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 321 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 322 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 364 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 365 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 418 >gi|73954046|ref|XP_546239.2| PREDICTED: similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) [Canis familiaris] Length = 967 Score = 39.4 bits (90), Expect = 1.5, Method: Composition-based stats. Identities = 16/185 (8%), Positives = 54/185 (29%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + L + + ++ + + L+K R+ L R Sbjct: 720 ICDKERECLTRKQELLRDREAALWEMEEHHLQERHQLVK--QQLKDQYFLQRHELLRKHE 777 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + K+ + + + ++ + +Q Sbjct: 778 KEREQMQRYNQRMIEQLKMRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGAGSASEQRE 837 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + CH V T+ Sbjct: 838 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMMAQCESNTSELQQLQNEKCHLLVEHETQK 897 Query: 449 LQSFA 453 L++ Sbjct: 898 LKALD 902 >gi|332094545|gb|EGI99591.1| exonuclease sbcC [Shigella boydii 5216-82] Length = 1047 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|270483756|ref|NP_001069728.2| dystrobrevin alpha [Bos taurus] gi|194678038|ref|XP_001788878.1| PREDICTED: dystrobrevin, alpha [Bos taurus] gi|297489641|ref|XP_002697725.1| PREDICTED: dystrobrevin, alpha [Bos taurus] gi|296473890|gb|DAA16005.1| dystrobrevin, alpha [Bos taurus] Length = 743 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|156054052|ref|XP_001592952.1| hypothetical protein SS1G_05874 [Sclerotinia sclerotiorum 1980] gi|154703654|gb|EDO03393.1| hypothetical protein SS1G_05874 [Sclerotinia sclerotiorum 1980 UF-70] Length = 882 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 9/105 (8%), Positives = 37/105 (35%), Gaps = 11/105 (10%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +++ R + +++ ++ R ++ K ++ + T++ + + + + Sbjct: 648 LEELRLDKDRLLRQADELRQERSRLNSEIQELKNQNAQLIEDHTRDVLSIKAKETQLVRS 707 Query: 426 RIEF----ILSHKIKSCHTSVSI---TTRILQSFAYKNTLKRGYT 463 R + + +++ + S + RGY+ Sbjct: 708 RADAETAEAMCAQLRREQNRLKHALSAAERANSHSP----SRGYS 748 >gi|126325691|ref|XP_001362449.1| PREDICTED: similar to synapsin Ia [Monodelphis domestica] Length = 1255 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 56/172 (32%), Gaps = 3/172 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 646 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQEIYSEQKTQLDNCPESMREQLQQ 705 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++ + Q + + + + Sbjct: 706 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKEKLTQQLLREVAEYQRNIVTRKEK 763 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 764 ISALKKQASHIVQQAQREQDHFVKEKNNLML-MLQREKENLCNLEKKYSSLS 814 >gi|254241789|ref|ZP_04935111.1| hypothetical protein PA2G_02502 [Pseudomonas aeruginosa 2192] gi|126195167|gb|EAZ59230.1| hypothetical protein PA2G_02502 [Pseudomonas aeruginosa 2192] Length = 479 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 20/220 (9%), Positives = 54/220 (24%), Gaps = 19/220 (8%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + A +MA + + + + + + Sbjct: 159 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAPPAEPPRKQEDEQTARLAQLVKQQRQQL 218 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 RL L R+ E L + + + + L +++ + E Q Sbjct: 219 AALARQQEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQAREKAELQ 276 Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422 Q + + +Q R ++ + L + + + Sbjct: 277 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAAAVAGYKEQVSI 336 Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + L +++ + L + + L+R Sbjct: 337 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 376 >gi|12585359|sp|O55098|STK10_MOUSE RecName: Full=Serine/threonine-protein kinase 10; AltName: Full=Lymphocyte-oriented kinase gi|2723475|dbj|BAA24073.1| LOK [Mus musculus] Length = 966 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 14/207 (6%), Positives = 55/207 (26%), Gaps = 10/207 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + ++ ++ + Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGET 815 Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ + +Q + ++E+ +Q + + + + + Sbjct: 816 RMAMYKKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHEHQMRDMVAQCESN 875 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + C+ V T+ L++ Sbjct: 876 MSELQQLQNEKCYLLVEHETQKLKALD 902 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D A + + L+ + + K +K Q Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + + RL R+ + + R R D + K ++ + +++ + Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742 Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + L+ K+++ + R + +++ R+ L + + Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802 Query: 440 TSV 442 + Sbjct: 803 ARL 805 >gi|167524637|ref|XP_001746654.1| hypothetical protein [Monosiga brevicollis MX1] gi|163774924|gb|EDQ88550.1| predicted protein [Monosiga brevicollis MX1] Length = 606 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/158 (9%), Positives = 44/158 (27%), Gaps = 10/158 (6%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + + +A+ L+ L L + ++ F Sbjct: 237 YYEEVHQLQKQRHEEMKRAMQRLQAQLADKERELADLQAMVGPDVRRKWDDDAMAFVPTA 296 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 + +Q+ + + + + +Q Y L ++ + R + R+ Sbjct: 297 QEL-------RLQELQAEVERLRARAARDHQQRKDYEHLARRHQQREA---RAGAQERLQ 346 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 +L + R+ + H + + L Sbjct: 347 HLVREYEADQKRLRHQMQHLQRQHDAQAKVQEMQLSDL 384 >gi|114588423|ref|XP_001153670.1| PREDICTED: pleckstrin homology-like domain, family B, member 2 isoform 4 [Pan troglodytes] Length = 1155 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 57/172 (33%), Gaps = 3/172 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDVESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLS 815 >gi|187732182|ref|YP_001879105.1| exonuclease subunit SbcC [Shigella boydii CDC 3083-94] gi|187429174|gb|ACD08448.1| nuclease SbcCD, C subunit [Shigella boydii CDC 3083-94] Length = 1047 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 40/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHSEQKLNAL 399 >gi|323184778|gb|EFZ70149.1| exonuclease sbcC [Escherichia coli 1357] Length = 1047 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|320181623|gb|EFW56538.1| Exonuclease SbcC [Shigella boydii ATCC 9905] Length = 1047 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|326435946|gb|EGD81516.1| hypothetical protein PTSG_02234 [Salpingoeca sp. ATCC 50818] Length = 973 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 16/161 (9%), Positives = 40/161 (24%), Gaps = 3/161 (1%) Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 L + + +A + + R R + Sbjct: 745 LIQEQREKQRKRKDKERQQKERQERAAMLLAKATAHDRVRT--VKWYGLRAWMSFHSALK 802 Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 + H L K + + +Q+ R + + K + ++ Sbjct: 803 KQQEHAAGHHHRHLLRQCWDKWASALEARHAQQQQMADSQRREMLKRRLVKCWRAALKQQ 862 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + + R+ H K+ R+ + K + R+ Sbjct: 863 RERYRVADGRFH-AKVTRRLLARWRERTKQEQQRMLHLERL 902 >gi|237843561|ref|XP_002371078.1| plectin, putative [Toxoplasma gondii ME49] gi|211968742|gb|EEB03938.1| plectin, putative [Toxoplasma gondii ME49] Length = 3686 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 28/246 (11%), Positives = 74/246 (30%), Gaps = 3/246 (1%) Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 + + R S E E + + + G + + A A Sbjct: 2911 EALTSLRAELSREQADRAAHEKLAEELKACKCALARERGEKEEAARAWQEELTLATRRQE 2970 Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC-SRYRL 328 E + K+ L ++ L + L +A D ++ R Sbjct: 2971 EQEEEMKNKQAEIDVLNAMQDELQEQLEELRSRCSQLSAKEEEAPRGRDDEMAYMQRQLA 3030 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + + + E+ R+ + + + L ++Q + + + + Q+ +E + Sbjct: 3031 ETVEEKGRLASELATVREVYAQQSEEQKKQLEDLALSLQASEREVADLQRRLEAVTLDVE 3090 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHT--HIKKLITRIEFILSHKIKSCHTSVSITT 446 R K E + L + + + + + R+ + +++ + Sbjct: 3091 RQQQEAKAEHLRALEVKQSECMRKAGEAANASERAEATQRLLEAVQTQLEEKEKARVAVE 3150 Query: 447 RILQSF 452 R L++ Sbjct: 3151 RELEAL 3156 >gi|320544544|ref|NP_001188695.1| Muscle-specific protein 300, isoform G [Drosophila melanogaster] gi|318068310|gb|ADV36945.1| Muscle-specific protein 300, isoform G [Drosophila melanogaster] Length = 13540 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + + ++ + L + LS + L Sbjct: 12290 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 12349 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 12350 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 12409 Query: 392 FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + I L +Q+K + + + + S +S L Sbjct: 12410 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 12469 Query: 450 QS 451 ++ Sbjct: 12470 KT 12471 >gi|214010133|ref|NP_001135735.1| disrupted in schizophrenia 1 [Danio rerio] gi|166832195|gb|ABY90095.1| disrupted in schizophrenia 1 [Danio rerio] Length = 994 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 13/185 (7%), Positives = 51/185 (27%), Gaps = 6/185 (3%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + S + I+ ++ + L+ L + L + Sbjct: 568 SEDQRSCISQSRAQTRETLLEEKQRIQKEMCDVQRRLRDLQERSRALELQLELQEMQGPV 627 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L + R ++ + + + + + E+++ + +++ + L Sbjct: 628 LRAADSPHLHLTARALEDLLTSEHRQRISVSPPAHIRRLEEQERVLSLSIREAETKVLLN 687 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS------HKIKSCHTSVSITTRI 448 ++ ++ + E + + + + + + R Sbjct: 688 QRLCFSLRQKVSESETQLLALHEAKLTAVSGNDFSSAKELKAEIRSVYRERDRLELLHRK 747 Query: 449 LQSFA 453 LQ+ + Sbjct: 748 LQTLS 752 >gi|195342674|ref|XP_002037925.1| GM18531 [Drosophila sechellia] gi|194132775|gb|EDW54343.1| GM18531 [Drosophila sechellia] Length = 8290 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + L ++ + ++ Sbjct: 7606 HFNIQKLSHAIGNVQSQNSDLSLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7665 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + + E + + + ++ ++ +++ + Q + Sbjct: 7666 LEQRRDNLQQLAEHWD-SFENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7724 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + ++ L Sbjct: 7725 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVGQQAKLNDTLRDKEQQ 7784 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7785 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7816 >gi|309379614|emb|CBX21785.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 1161 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 40/146 (27%), Gaps = 1/146 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ R+ RI Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQNLHQRIERDKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVS 443 + + RI +++ + Sbjct: 323 AAQAQLQRIHQEQQQIRVQLEENELQ 348 >gi|296191715|ref|XP_002743753.1| PREDICTED: protein SFI1 homolog [Callithrix jacchus] Length = 1338 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/175 (8%), Positives = 46/175 (26%), Gaps = 12/175 (6%) Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 L +++ + + L R R + Sbjct: 817 LVQWREIASVQIYYRQQEDHAIWEARKVLARGCLRTWFQRWRDCSRRSAQQRLQLERAAQ 876 Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQ------QHIEQIVKQHLRYIFLEKKEKIAI 401 H ++ + + H++ R+ +L +Q Q + Q R ++++ Sbjct: 877 HHHRQLLLEGLARWKTHHLGCVRKRLLHRQSTQLLAQRLSQTCFHQWRQQLAARRQEQQA 936 Query: 402 LHMLRE----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450 + +++ R + + ++ + R+L+ Sbjct: 937 SVRALWFWAFSLQAKVWATWLAFVLERRRKKARMQQAFQAYQGQLLQEGAMRLLR 991 >gi|145493186|ref|XP_001432589.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124399702|emb|CAK65192.1| unnamed protein product [Paramecium tetraurelia] Length = 431 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 50/161 (31%), Gaps = 1/161 (0%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 ++ ++ + KI + + + R +L EH Sbjct: 227 QQSQEHLEQIKEKQNQIFQMKIKKIKEKIDYFQEKINIIEKKRLTNLQLTYNKEHEHHQQ 286 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + +I + L I K + L + Q+ ++ + R ++ + Sbjct: 287 MNQIRARSENIFRNKSLNMLNKQILKEQTFQLVQSQNQLELESKLSRLNQKWLIQQSQVA 346 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + + + L I + R++ + +K++ + Sbjct: 347 RADKLKLSY-LQQLELKISQRDQRLKDQIQNKLEIQRRRLK 386 >gi|307320645|ref|ZP_07600058.1| SMC domain protein [Sinorhizobium meliloti AK83] gi|306893680|gb|EFN24453.1| SMC domain protein [Sinorhizobium meliloti AK83] Length = 1018 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 9/116 (7%), Positives = 36/116 (31%), Gaps = 3/116 (2%) Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 ++ +++ + + R + E + E + +E+++ Sbjct: 116 QERWPAISNLHGYLSITHFLGQASTRRFSLREPRAQWEALKGPAGVDRINSLRERVSGQG 175 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 R+ I ++K + + +++ + +S + + L+ Sbjct: 176 A-RQAFTRAIRDRTLRLEKASEALRSW--RSLIEDRDRLAVLSNSERSLSPQQVLE 228 >gi|195134458|ref|XP_002011654.1| GI11144 [Drosophila mojavensis] gi|193906777|gb|EDW05644.1| GI11144 [Drosophila mojavensis] Length = 330 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 45/164 (27%), Gaps = 11/164 (6%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + + + + L + L R R D L + L + Sbjct: 128 RDRLDPLRERLDPLRERDPLCER-LDPLRERLDPLRERADPLRERADP-LRDRLDPLRER 185 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + R D L + + E++ LR +E++ L + Sbjct: 186 LDPLRERPDPDPLRERLDPDPLR--------ERLDPDPLRERLEPLRERLDPLRERADPL 237 Query: 410 KNRIFYLHTHIKKLITRIE-FILSHKIKSCHTSVSITTRILQSF 452 ++R L L R++ L ++ + L Sbjct: 238 RDRADPLRERADPLRERLDPDPLRERLDPLRERLDPLRERLDPL 281 >gi|73955596|ref|XP_859864.1| PREDICTED: similar to LYST-interacting protein LIP8 isoform 2 [Canis familiaris] Length = 658 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 13/169 (7%), Positives = 46/169 (27%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 LE + + S + L L R + R++E + Sbjct: 91 ELEQQRCRSLQEERDEARAGQLSEHRQLETLKLALEEERQAWVQQERQMEGRYGALQEEV 150 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + + +++ + + R + +++++ Sbjct: 151 QAQLEKEKENTQREAQAAREAQKQLVLVQSEVRRLEGELDTARRERDALQLEMSLVQARY 210 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ Sbjct: 211 ESQRIQMESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLN 259 >gi|28972093|dbj|BAC65500.1| mKIAA0204 protein [Mus musculus] Length = 1307 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 987 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNVLKNRKKEEQEFVQKQQQELDGS 1046 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 1047 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1103 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1104 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1143 >gi|281338412|gb|EFB13996.1| hypothetical protein PANDA_017489 [Ailuropoda melanoleuca] Length = 934 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 15/185 (8%), Positives = 53/185 (28%), Gaps = 7/185 (3%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + L + ++ + + L+K R+ L R Sbjct: 687 ICDKERECLTRKQELLRDREAALWETEEHHLQERHQLVK--QQLKDQYFLQRHELVRKHE 744 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-----QIVKQHL 388 + ++ R + ++ + + + ++ + +Q Sbjct: 745 KEREQMQRYNQRMVEQLKVRQQQERARLPKIQRSEGKTRMAMYKKSLHINGAGSASEQRE 804 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + ++E+ +Q + + + + + + + + CH V T+ Sbjct: 805 KIKQFSQQEEKRQKSERLQQQQKHENQMRDMTAQCESNMSELQQLQNEKCHLLVEHETQK 864 Query: 449 LQSFA 453 L++ Sbjct: 865 LKALD 869 >gi|146184747|ref|XP_001030049.2| hypothetical protein TTHERM_01164060 [Tetrahymena thermophila] gi|146142674|gb|EAR82386.2| hypothetical protein TTHERM_01164060 [Tetrahymena thermophila SB210] Length = 1339 Score = 39.4 bits (90), Expect = 1.6, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 52/164 (31%), Gaps = 10/164 (6%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 I + + K L + + R L R R + Sbjct: 302 EYIAEQKRIKDEKEKELQRLREMQEKANDRQAELDFLRAKRAMEQNERNARDKERREAEL 361 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQI-------VKQHLRYIFLEKKEKIAILHMLREQTK 410 + ++ RQ EK+Q +++ ++ ++ E++ +I + +Q K Sbjct: 362 RQKINQELLEARRQQQYEKEQRLQEQAKNDRDEFQRIIQAQKQEREIEIKLQIEREQQIK 421 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKS---CHTSVSITTRILQS 451 L I +I+ ++++ + ++L+S Sbjct: 422 KHADELRKQIALNEEKIKQDQRNRLEEGKKIRDQLQQQKKMLES 465 >gi|297263065|ref|XP_001088353.2| PREDICTED: liprin-alpha-2 isoform 1 [Macaca mulatta] Length = 1257 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|332839943|ref|XP_003313878.1| PREDICTED: liprin-alpha-2 isoform 1 [Pan troglodytes] gi|221042944|dbj|BAH13149.1| unnamed protein product [Homo sapiens] Length = 1156 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 90 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 147 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 148 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 207 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 208 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 266 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 267 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 326 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 327 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 369 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 370 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 423 >gi|119617782|gb|EAW97376.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2, isoform CRA_c [Homo sapiens] Length = 1144 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|219520325|gb|AAI43486.1| PPFIA2 protein [Homo sapiens] Length = 1251 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|332839945|ref|XP_003313879.1| PREDICTED: liprin-alpha-2 isoform 2 [Pan troglodytes] gi|193785259|dbj|BAG54412.1| unnamed protein product [Homo sapiens] Length = 1232 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 203 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 204 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 263 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 264 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 322 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 323 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 382 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 383 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 425 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 426 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 479 >gi|168702550|ref|ZP_02734827.1| hypothetical protein GobsU_23682 [Gemmata obscuriglobus UQM 2246] Length = 1303 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 15/182 (8%), Positives = 52/182 (28%), Gaps = 1/182 (0%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A + + Q+ + + RL + + + + + Sbjct: 706 AAREQRNQQAQRDREQRENQELADRLKELARRQTDLTDRVKELQSALEQARDQKQKEELQ 765 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + L + R + + R++ + + R+ + + ++ + Q + R Sbjct: 766 QQLKKLRDQQQQVLRDTDQLQERLEQEQNRDRLAGAREQVEQSREAVRQASEALERGQLG 825 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + + + T+ ++ R + K+ ++ L+ + Sbjct: 826 QAVNEGTRAQRQLDATREQLRRETAARFGEEMRDLRQQARKLDDEQQKLTKQLDELKQ-S 884 Query: 454 YK 455 K Sbjct: 885 PK 886 >gi|160899599|ref|YP_001565181.1| hypothetical protein Daci_4165 [Delftia acidovorans SPH-1] gi|163858598|ref|YP_001632896.1| hypothetical protein Bpet4280 [Bordetella petrii DSM 12804] gi|160365183|gb|ABX36796.1| conserved hypothetical protein [Delftia acidovorans SPH-1] gi|163262326|emb|CAP44629.1| putative membrane protein [Bordetella petrii] gi|327479863|gb|AEA83173.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 213 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 39/168 (23%), Gaps = 22/168 (13%) Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 + I L I V L Y + + +L ++ + + Sbjct: 1 MNTAQAPRRPISAVVLQSLMWLWLISLSVFAALSYQTMNDQADQTLLDSRLQRLEAQAVG 60 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQ 475 L I+ + R + +K + +++ TL GY Sbjct: 61 LAETIEAIQQRPVVATAADLKDTRERLEARAAQVET-----TLS-GYA-----------A 103 Query: 476 KRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQG 523 +L + Q A + K E Sbjct: 104 AEDL---QALRAEVE--QIKARPSALRAAAPAQPRSPSRPTAKPEPPP 146 >gi|257467554|ref|NP_001158111.1| STE20-like serine/threonine-protein kinase isoform 2 [Mus musculus] gi|4741823|gb|AAD28717.1|AF112855_1 Ste20-related kinase SMAK [Mus musculus] gi|124297506|gb|AAI31675.1| Slk protein [Mus musculus] Length = 1202 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 882 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNVLKNRKKEEQEFVQKQQQELDGS 941 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 942 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 998 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 999 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1038 >gi|29171755|ref|NP_003616.2| liprin-alpha-2 [Homo sapiens] gi|114646073|ref|XP_509243.2| PREDICTED: liprin-alpha-2 isoform 3 [Pan troglodytes] Length = 1257 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|39930479|ref|NP_219493.1| dixin isoform b [Homo sapiens] gi|34190572|gb|AAH33034.1| DIX domain containing 1 [Homo sapiens] gi|119587577|gb|EAW67173.1| DIX domain containing 1, isoform CRA_b [Homo sapiens] gi|168270686|dbj|BAG10136.1| dixin [synthetic construct] Length = 472 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 64 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 123 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 124 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 181 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 182 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 240 Query: 453 AYKNT-LKR 460 +Y L+R Sbjct: 241 SYHQVDLER 249 >gi|18860017|ref|NP_572902.1| Ndc80 [Drosophila melanogaster] gi|7292901|gb|AAF48292.1| Ndc80 [Drosophila melanogaster] gi|16769462|gb|AAL28950.1| LD33040p [Drosophila melanogaster] Length = 675 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 48/153 (31%), Gaps = 8/153 (5%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 ++ ++ L + L R + + L+ + + + I + Sbjct: 481 NPNQEDISERVQCLELLGKLLQQHRQQN----IDRRQMLDKQVAKVKSDSIELDTEIATM 536 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE----KIAILHMLREQTKNRIFYL 416 QK R +E ++ ++ R LE + ++ L +Q ++ Sbjct: 537 DSQLRAQKQRLTKMEASYRTKRDMQAQHRQQLLEDQYDQTARLDELEKREKQALEKLEAS 596 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + L+T E +K+ + + L Sbjct: 597 KQRNEDLLTAAEQFQEQDLKARQDRLEKCEQKL 629 >gi|281351979|gb|EFB27563.1| hypothetical protein PANDA_004929 [Ailuropoda melanoleuca] Length = 1141 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 63 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 120 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 121 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 180 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 181 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 239 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 240 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 299 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 300 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 342 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 343 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 396 >gi|24459867|emb|CAD43195.1| disrupted in schizophrenia 1 protein [Danio rerio] Length = 963 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 13/185 (7%), Positives = 51/185 (27%), Gaps = 6/185 (3%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + S + I+ ++ + L+ L + L + Sbjct: 537 SEDQRSCISQSRAQTRETLLEEKQRIQKEMCDVQRRLRDLQERSRALELQLELQEMQGPV 596 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L + R ++ + + + + + E+++ + +++ + L Sbjct: 597 LRAADSPHLHLTARALEDLLTSEHRQRISVSPPAHIRRLEEQERVLSLSIREAETKVLLN 656 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS------HKIKSCHTSVSITTRI 448 ++ ++ + E + + + + + + R Sbjct: 657 QRLCFSLRQKVSESETQLLALHEAKLTAVSGNDFSSAKELKAEIRSVYRERDRLELLHRK 716 Query: 449 LQSFA 453 LQ+ + Sbjct: 717 LQTLS 721 >gi|304388228|ref|ZP_07370348.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria meningitidis ATCC 13091] gi|304337755|gb|EFM03904.1| SMC structural maintenance of chromosomes partitioning protein [Neisseria meningitidis ATCC 13091] Length = 1161 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|291383809|ref|XP_002708418.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus] Length = 1441 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 9/172 (5%) Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 + +L A L + RL + L S + + L + +R ++LE L Sbjct: 857 EERKQRADLLAHLTGELERLRRAHERELESTRQEQDKQREDLWRRQREQERKLQDLEVEL 916 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 EI + +K + +++Q +E+ E K++ Sbjct: 917 EIRTKDVKAKLAQ----LDVQEKTARKEKQQLLDVQRQVALEREEATATHRHLEEAKKEH 972 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 A L Q + + L L ++++ ++++ + L++ Sbjct: 973 AQLMESSRQLRRVLDELQARKLDLESQLD-----QLQAQSQRLQRHVSSLEA 1019 >gi|229506727|ref|ZP_04396236.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae BX 330286] gi|229510479|ref|ZP_04399959.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae B33] gi|229517390|ref|ZP_04406835.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae RC9] gi|229605200|ref|YP_002875904.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae MJ-1236] gi|298499967|ref|ZP_07009773.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MAK 757] gi|229345426|gb|EEO10399.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae RC9] gi|229352924|gb|EEO17864.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae B33] gi|229357078|gb|EEO21996.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae BX 330286] gi|229371686|gb|ACQ62108.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae MJ-1236] gi|297541948|gb|EFH77999.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MAK 757] Length = 570 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 32/124 (25%), Gaps = 11/124 (8%) Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHL 388 N ++ + + +K L I N+Q KQQ + Q + Sbjct: 136 AINQQVREQETDPELAELASALKQSQLQAEHELSQRRILHNKQRHFRKQQRL-QAEELPE 194 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSIT 445 + + Q + I L R++ + + + Sbjct: 195 KEKHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAAL 254 Query: 446 TRIL 449 + L Sbjct: 255 QKKL 258 >gi|194226159|ref|XP_001499900.2| PREDICTED: similar to amyloid precursor protein [Equus caballus] Length = 751 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|193083934|gb|ACF09611.1| hypothetical protein [uncultured marine crenarchaeote AD1000-325-A12] Length = 438 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 36 CVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKG--TLNKIEFLPEEGIEFLVIGKIT 93 V G IS + GH + ++ N++ I+ I+ TL I E+G E + G I+ Sbjct: 270 YVNGTISKKPNVIRGGHIFLKIESNNNHINCAIYAPTITLKTISRKLEKGDEVEIGGGIS 329 >gi|326663860|ref|XP_003197680.1| PREDICTED: sodium channel and clathrin linker 1 [Danio rerio] Length = 431 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 33/349 (9%), Positives = 94/349 (26%), Gaps = 11/349 (3%) Query: 106 ESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQR 165 S+ + +L + ++K E L ++ K+ + + + A+ T +R Sbjct: 78 SSIQLAEEASLQREQAQLREKQRAEEL--EKMKDAMKQLIQNAAMRTRKEVESVRKQCNV 135 Query: 166 ISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW 225 R + ++ E E A+ + + + + Sbjct: 136 QIHRMAEELSALQLECADKETQIERAHRERKAVEEELEKVYKEGRVGEPEMRKMEALHQR 195 Query: 226 HFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSL 285 N E + ++++ ++ +Y + + Sbjct: 196 CLNAERLKDETQ----LALNSMNNKMKKMEMEY---SEELSRCQEEVRRLQSALTTARQE 248 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + + + + + +L K + + + + E LE + Sbjct: 249 STAVSEERLTLQQENQQMHRDMEALRKECALAQRRAKQQVSSMQQELCVKEQGLESRLRE 308 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLEKKEKIAILHM 404 + + L +R K Q LR +K+++ L + Sbjct: 309 MEESSKNSSAGLTRLLLAQQKTISRYKDEAKNLTQAFQQKLNSLRSELNRQKQRVQELEI 368 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E +I + + + L ++ + ++ L + Sbjct: 369 QMEADHQKILEFERQVSEQQEK-NTRLQRRLSQAEQRAASASQQLSVMS 416 >gi|318040982|ref|ZP_07972938.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) [Synechococcus sp. CB0101] Length = 718 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 18/189 (9%), Positives = 59/189 (31%), Gaps = 10/189 (5%) Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-------R 325 +A+ + L A + ++ + +A N + L R Sbjct: 258 IAIEDVAPGWLGVNGLVAGAAAGTLLSLRQWRRRDLQMERAKRNQLRLLRQELPGPLLSR 317 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 L ++ + + E + + + + + + + Q + + ++Q+ Sbjct: 318 SELLQVIHQPDGAGEDGLSELWIAALQVKVMLFREAIRQRGEAQNQALAWLGERLQQLEH 377 Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 E + ++H L + + + + H+++L + + + T + + Sbjct: 378 TRH-LALGENNTLLQVIHPLSSEAREELSQIEHHLQELQQAMAEAMQLSVDGILTRLDSS 436 Query: 446 T--RILQSF 452 + L Sbjct: 437 DVTQQLADL 445 >gi|114632699|ref|XP_001137172.1| PREDICTED: serine/threonine kinase 2 isoform 3 [Pan troglodytes] Length = 1009 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 689 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 748 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 749 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 805 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 806 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 845 >gi|67971130|dbj|BAE01907.1| unnamed protein product [Macaca fascicularis] Length = 751 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|82542245|gb|ABB82034.1| amyloid precursor protein variant 2 [Sus scrofa] Length = 751 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|260801311|ref|XP_002595539.1| hypothetical protein BRAFLDRAFT_64593 [Branchiostoma floridae] gi|229280786|gb|EEN51551.1| hypothetical protein BRAFLDRAFT_64593 [Branchiostoma floridae] Length = 1415 Score = 39.4 bits (90), Expect = 1.7, Method: Composition-based stats. Identities = 24/199 (12%), Positives = 49/199 (24%), Gaps = 4/199 (2%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 PT A +P Q A + + + + A N + L Sbjct: 697 SQPTIAPGRPLPTPSVPQGHTGTYGANERLSLELQQQADMFKQQQEMLARQNQEMALHMQ 756 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 + RL + L+ + Q Sbjct: 757 QERLMQQISPRSQMASHSSMAPQSQMTPNYQLPTYQLPTMGHSPANVSDLDSKIRQLQAE 816 Query: 385 KQHLRYIFLEKKEKIAI-LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + HL+ + K + L + E K R+ ++ R+ + + Sbjct: 817 RDHLQIMLESSKHRHQEELSSVEEAHKARLQLAEESFQRREARLREENEQLVTQHLARLK 876 Query: 444 ITT---RILQSFAYKNTLK 459 +Q+ +K L+ Sbjct: 877 TADEEKAQVQAAHHKKVLE 895 >gi|301769383|ref|XP_002920109.1| PREDICTED: amyloid beta A4 protein-like isoform 2 [Ailuropoda melanoleuca] Length = 750 Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S IP +A + T D E Sbjct: 321 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 380 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 381 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 438 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 439 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 498 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 499 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 530 >gi|221481711|gb|EEE20087.1| trichohyalin, putative [Toxoplasma gondii GT1] Length = 394 Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 12/181 (6%) Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 NL+ ++ + R + + L KAL ++ +R + L+ LE Sbjct: 185 QANLQKKMQSAEERRNQLRAQEKERLAKALQQVEKVQGKNRLEEEEKSIRLQEKLEEAEK 244 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 R+ + +S ++ R+ IL ++ +E+ K + L + K I+ Sbjct: 245 RRKQLLEE-----ESTRRKQKWEEKREIILAREMEMEEKKKSLEERVELAIERKHKIIEE 299 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-------AYKNT 457 + + +I + + T +E L + ++ ++ + T Sbjct: 300 TKLTLQKKITEAEEQVSRNRTEMERRLQELAEKMSQKQEKAEQLRETLMKKKKSASPSAT 359 Query: 458 L 458 L Sbjct: 360 L 360 >gi|116696029|ref|YP_841605.1| signal transduction histidine kinase [Ralstonia eutropha H16] gi|113530528|emb|CAJ96875.1| signal transduction histidine kinase [Ralstonia eutropha H16] Length = 482 Score = 39.4 bits (90), Expect = 1.8, Method: Composition-based stats. Identities = 14/177 (7%), Positives = 38/177 (21%), Gaps = 27/177 (15%) Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 L + R + L ++ + + + Sbjct: 192 WALTRHVTGPVRRLREATQALADGELATRTPPVLARRADELGQLARDFDAMADRLQRLMD 251 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITR--IEFILSHKIKSCHTSVSITT------RI 448 + +L + + ++ + L ++ R + + +I+ + Sbjct: 252 WREQLLRNIAHELRSPLGRLRLSLELARRRDAMLDLQFERIERETERLDALVERTLQLAR 311 Query: 449 LQSFAY------KNTL-------------KRGYTSIQDTNNNFITQKRNLATKTRIL 486 L + A L RG + I + I Sbjct: 312 LHAMAPVLRPIDLAELLDVIVTDARFEAAARGVAICWTPPDELIVDADAATLGSAIE 368 >gi|297193323|ref|ZP_06910721.1| single-stranded DNA-binding protein 1 [Streptomyces pristinaespiralis ATCC 25486] gi|297151733|gb|EDY62267.2| single-stranded DNA-binding protein 1 [Streptomyces pristinaespiralis ATCC 25486] Length = 223 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-----GSSKYQIIIESLI 109 KD S + +W+ + + G+ +V G++ ++ + Y++ +E + Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVVVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|198429709|ref|XP_002123219.1| PREDICTED: similar to intersectin 2 [Ciona intestinalis] Length = 1658 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 18/198 (9%), Positives = 51/198 (25%), Gaps = 8/198 (4%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 L A P + V + + + N + + + + L ++ Sbjct: 296 LSAMAPNNDDTLDGGVFASFEDRRRDNFQKGNLELEKRRLALLESQQKEKNRLEQQEREQ 355 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 R + + + R + L R+ ++Q E Sbjct: 356 REKREKERQEQERKRQEEIERQREQQRAIEREREEQRRKALEQKEAAQREMERQRQLEWE 415 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 ++ R L+ K + + + + ++ + + + Sbjct: 416 RLR----RKELLQLKLREQESVTSLRAKTKTLDVELNTLLEKRKQL----QTRARDFESR 467 Query: 442 VSITTRILQSFAYKNTLK 459 + L++ + LK Sbjct: 468 LKEQNEQLEAVNKQRELK 485 >gi|111226185|ref|YP_716979.1| single-stranded DNA-binding protein [Frankia alni ACN14a] gi|111153717|emb|CAJ65475.1| Single-strand binding protein 2 (SSB 2) (Helix-destabilizing protein 2) [Frankia alni ACN14a] Length = 187 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 KD + + IW+ + ++G +V G++ Sbjct: 48 KDGEALFLRCSIWRQAAEHVAESLQKGARVIVTGRL 83 >gi|85397968|gb|AAI04913.1| PPFIA2 protein [Homo sapiens] Length = 1236 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|289641252|ref|ZP_06473419.1| single-strand binding protein [Frankia symbiont of Datisca glomerata] gi|289509014|gb|EFD29946.1| single-strand binding protein [Frankia symbiont of Datisca glomerata] Length = 186 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 16/36 (44%), Gaps = 1/36 (2%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 KD + + IW+ + ++G +V G++ Sbjct: 48 KDGDALFLRCSIWRQAAEHVAESLQKGARVIVQGRL 83 >gi|149720878|ref|XP_001496031.1| PREDICTED: dystrobrevin, alpha isoform 2 [Equus caballus] Length = 743 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPTQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|321475460|gb|EFX86423.1| hypothetical protein DAPPUDRAFT_308444 [Daphnia pulex] Length = 411 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 21/213 (9%), Positives = 61/213 (28%), Gaps = 6/213 (2%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 D + P + I + ++ + + + Sbjct: 204 VDDEAVAEMNLSMNAHFPFAVCGSTDFIRVGNKMVRARQYPWGTVQVENENHCDFVKLRE 263 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + + L + + + + F+ + + K + RQ + + Sbjct: 264 MLIRTNMEDLRETTHIRHYEIYRRLRLEQMGFSDLDSDNKPQSFQQTYEHKRQLL---RM 320 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 ++Q + + + KEK L ++ ++R L + +++ +++ Sbjct: 321 ELQQKEDEMRQQFVIRVKEKETELKEAEKELQSRFDRLKKEHAEEKRKLDEA-KKRLEDN 379 Query: 439 HTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 + + L + + TL G T N Sbjct: 380 QNELVKRRQQLLTQS-TGTLGHG-TLTLGKNKK 410 >gi|319945375|ref|ZP_08019636.1| hypothetical protein HMPREF0551_2484 [Lautropia mirabilis ATCC 51599] gi|319741368|gb|EFV93794.1| hypothetical protein HMPREF0551_2484 [Lautropia mirabilis ATCC 51599] Length = 915 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/167 (10%), Positives = 47/167 (28%), Gaps = 9/167 (5%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 A +++ ++ K L L + + + L + Sbjct: 232 WSQYRAAVAQKVLLETLEQKHEARLELRGRLLCMKPLIDDALAHWQQHYDTRHQALTREL 291 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + + L Q + +Q +Q+ R+ + +++ +L Sbjct: 292 GQHDTEMKRLRDEDIQ--LARQQSLAEQEEKQLRQQTDQLQALQRRFALIPERQ---LLD 346 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 R + I + I + +R + +I + L+ Sbjct: 347 QQRAALQQDIDAIVVRIGQAQSREPAAIEREI----QRLQRELAQLE 389 >gi|297702488|ref|XP_002828208.1| PREDICTED: LOW QUALITY PROTEIN: dystrobrevin alpha-like [Pongo abelii] Length = 743 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|221502223|gb|EEE27961.1| trichohyalin, putative [Toxoplasma gondii VEG] Length = 394 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 12/181 (6%) Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 NL+ ++ + R + + L KAL ++ +R + L+ LE Sbjct: 185 QANLQKKMQSAEERRNQLRAQEKERLAKALQQVEKVQGKNRLEEEEKSIRLQEKLEEAEK 244 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 R+ + +S ++ R+ IL ++ +E+ K + L + K I+ Sbjct: 245 RRKQLLEE-----ESTRRKQKWEEKREIILAREMEMEEKKKSLEERVELAIERKHKIIEE 299 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF-------AYKNT 457 + + +I + + T +E L + ++ ++ + T Sbjct: 300 TKLTLQKKITEAEEQVSRNRTEMERRLQELAEKMSQKQEKAEQLRETLMKKKKSASPSAT 359 Query: 458 L 458 L Sbjct: 360 L 360 >gi|164660290|ref|XP_001731268.1| hypothetical protein MGL_1451 [Malassezia globosa CBS 7966] gi|159105168|gb|EDP44054.1| hypothetical protein MGL_1451 [Malassezia globosa CBS 7966] Length = 1065 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 70/218 (32%), Gaps = 13/218 (5%) Query: 247 IGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT 306 +G+ + D AD A TP + H Q S +++ ++ ++ Sbjct: 148 VGNLCAFLPQDRVADFAAMTPQRLLQDTEHAAGHAQLSDWHMQLIECGRQKSELQSRLEQ 207 Query: 307 LNSLLKALPNSDQTLSCSRYRLDRL--------PRELEHNLEIIIFRKYRHFNHIINRIK 358 L + L R + E+ K R+ R + Sbjct: 208 EQREHDYLEERNTVLERDVRRYEERIALEKRVCALEVRIAFAEFHDSKSRYHAAHAKREE 267 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE--QTKNRIFYL 416 + + I ++ + + ++ + ++ + + ++E LR + R+ Sbjct: 268 AKRALERIFQSIEPLEQELERAQEKLDKMELVSSSHRREADDASSALRRYSTARERLDAE 327 Query: 417 HTHIKKLITRIE-FILSHK--IKSCHTSVSITTRILQS 451 + + R+E + ++ + ++ R +++ Sbjct: 328 MAALSEQEKRLEAQAAERRELMQQMRSRIADLERAIEA 365 >gi|114640307|ref|XP_001145139.1| PREDICTED: dixin isoform 2 [Pan troglodytes] Length = 472 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 64 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 123 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 124 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 181 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 182 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 240 Query: 453 AYKNT-LKR 460 +Y L+R Sbjct: 241 SYHQVDLER 249 >gi|85057957|ref|YP_456872.1| single-stranded DNA binding protein [Aster yellows witches'-broom phytoplasma AYWB] gi|85057962|ref|YP_456876.1| single-stranded DNA binding protein [Aster yellows witches'-broom phytoplasma AYWB] gi|84790071|gb|ABC65793.1| single-stranded DNA binding protein [Aster yellows witches'-broom phytoplasma AYWB] gi|84790093|gb|ABC65797.1| single-stranded DNA binding protein [Aster yellows witches'-broom phytoplasma AYWB] gi|307902849|emb|CBX25034.1| SSB protein [New Jersey aster yellows phytoplasma] Length = 104 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 5/57 (8%) Query: 38 RGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 G+IS + + KD I +I++ + +G + + G ++ Sbjct: 24 EGQISKLDFQIAVNN-----KDKTQFIPCVIFRNQAENMSMYLHKGSKVYLEGTLSI 75 >gi|296222499|ref|XP_002757206.1| PREDICTED: dystrobrevin alpha [Callithrix jacchus] Length = 743 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|291404779|ref|XP_002718767.1| PREDICTED: serine/threonine kinase 2 isoform 1 [Oryctolagus cuniculus] Length = 1241 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 41/145 (28%), Gaps = 14/145 (9%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R K + + + LD +++ + + R + ++ Sbjct: 947 RKELMKRRREELAQSQHAQEQEFVQKQQQELDGSLKKIIQQQKAELANIERECLNNKQQL 1006 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + +H+ EK Q ++Q +K M R Q R Sbjct: 1007 MRAREAAIWELEERHLQEKHQLLKQQLKDQY--------------FMQRHQLLKRHEKET 1052 Query: 418 THIKKLITRIEFILSHKIKSCHTSV 442 +++ R+ L ++ + Sbjct: 1053 EQMQRYNQRLIEELKNRQTQERARL 1077 >gi|260827092|ref|XP_002608499.1| hypothetical protein BRAFLDRAFT_126632 [Branchiostoma floridae] gi|229293850|gb|EEN64509.1| hypothetical protein BRAFLDRAFT_126632 [Branchiostoma floridae] Length = 1975 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 24/221 (10%), Positives = 57/221 (25%) Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 F R + +GH +A+ + + Sbjct: 163 DWSQDKPFAYVKTARETEKIRLVKFDPLGHHLLTGIANVPNVRPFDAAGVVQVDSSDSET 222 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 + + E + ++ L+S+ + L + LS + RLD++ E+ + + Sbjct: 223 DMLPEPDDSELPPRMSVWDRRSRVLHRLHSMEQDLRRRLELLSSAAARLDQMENEMRNMM 282 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 ++ +S + + I ++ + + Sbjct: 283 GSFQGQEQGMLPRGRVSARSLADPTANRADSTAIRARRGGSSNMPPSLQGTAGRASSSSL 342 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 L RI I +L R+ S + Sbjct: 343 HDLDARLSINHQRIRRTQEFIDRLRARLGLQPSSTLSRYEN 383 >gi|119587576|gb|EAW67172.1| DIX domain containing 1, isoform CRA_a [Homo sapiens] Length = 437 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 29 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 88 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 89 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 146 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 147 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 205 Query: 453 AYKNT-LKR 460 +Y L+R Sbjct: 206 SYHQVDLER 214 >gi|317419273|emb|CBN81310.1| Myosin phosphatase Rho-interacting protein [Dicentrarchus labrax] Length = 1595 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 12/157 (7%), Positives = 44/157 (28%), Gaps = 2/157 (1%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + + L L+A L R E + ++ + + Sbjct: 772 WQRLHTLNQDLQGELEAQKRKQDLAQQQIRTLKRSYTEAQDAVDRHETDIQALQTKLASA 831 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + ++ L+ +Q + ++ + ++ + + + Sbjct: 832 MAEILASEQAVARMRNELKLEQERSKEQEEEHGRSETTLRAQLKDSEDRLREVEANLLER 891 Query: 417 HTHIKKLITR--IEFILSHKIKSCHTSVSITTRILQS 451 + ++ L + ++ +I+ + T L + Sbjct: 892 NQALRHLERQQALQRDHMREIQRLQERLQEVTARLSA 928 >gi|126290408|ref|XP_001373148.1| PREDICTED: similar to protein phosphatase 1, regulatory (inhibitor) subunit 13B, [Monodelphis domestica] Length = 1107 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 16/215 (7%), Positives = 57/215 (26%), Gaps = 17/215 (7%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D AA + + + + + ++ + + L Sbjct: 146 LQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKL 205 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + NL I R F +++ L + + Q + Sbjct: 206 KKIRAM-----RGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAIL--RVDQLSQQLE 258 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---- 430 + ++ + + + ++ L+ + ++ +++ + Sbjct: 259 DLKKGKLNGFQSYNGRLSGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKDLLNKRNMEV 318 Query: 431 --LSHKIKSCHTSVSITTRILQ----SFAYKNTLK 459 + +I + L + + +++L Sbjct: 319 AMMDKRINELRERLYGKKIQLNRVNGTASPQSSLS 353 >gi|40950176|gb|AAR97728.1| beta amyloid precursor protein isoform APP751 [Canis lupus familiaris] Length = 751 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|3912955|sp|Q95241|A4_SAISC RecName: Full=Amyloid beta A4 protein; AltName: Full=ABPP; Short=APP; AltName: Full=Alzheimer disease amyloid A4 protein homolog; Contains: RecName: Full=N-APP; Contains: RecName: Full=Soluble APP-alpha; Short=S-APP-alpha; Contains: RecName: Full=Soluble APP-beta; Short=S-APP-beta; Contains: RecName: Full=C99; Contains: RecName: Full=Beta-amyloid protein 42; AltName: Full=Beta-APP42; Contains: RecName: Full=Beta-amyloid protein 40; AltName: Full=Beta-APP40; Contains: RecName: Full=C83; Contains: RecName: Full=P3(42); Contains: RecName: Full=P3(40); Contains: RecName: Full=C80; Contains: RecName: Full=Gamma-secretase C-terminal fragment 59; AltName: Full=Gamma-CTF(59); Contains: RecName: Full=Gamma-secretase C-terminal fragment 57; AltName: Full=Gamma-CTF(57); Contains: RecName: Full=Gamma-secretase C-terminal fragment 50; AltName: Full=Gamma-CTF(50); Contains: RecName: Full=C31; Flags: Precursor gi|4262047|gb|AAD14347.1|S81024_1 beta-amyloid precursor protein/beta PP [Saimiri sciureus] Length = 751 Score = 39.0 bits (89), Expect = 1.8, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|325203636|gb|ADY99089.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240355] Length = 1161 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKFLTAQLNRQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|296271509|ref|YP_003654141.1| single-strand binding protein [Thermobispora bispora DSM 43833] gi|296094296|gb|ADG90248.1| single-strand binding protein [Thermobispora bispora DSM 43833] Length = 171 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 28/62 (45%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTF-----PGSSKYQIIIESLI 109 KD + + +W+ T + + G+ +V G++ ++ + Y++ ++ + Sbjct: 49 KDGEALFLTCNVWRQTAENVAESLQRGMRVIVQGRLRQRSYETKEGERRTVYEVEVDDVG 108 Query: 110 PS 111 PS Sbjct: 109 PS 110 >gi|12698015|dbj|BAB21826.1| KIAA1735 protein [Homo sapiens] Length = 493 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 85 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 144 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 145 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 202 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 203 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 261 Query: 453 AYKNT-LKR 460 +Y L+R Sbjct: 262 SYHQVDLER 270 >gi|312074974|ref|XP_003140210.1| hypothetical protein LOAG_04625 [Loa loa] gi|307764627|gb|EFO23861.1| hypothetical protein LOAG_04625 [Loa loa] Length = 1051 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 8/196 (4%) Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI--KYKINTLNSLLKALPNSDQTLSC 323 M LQ L L+A+ + R+ + + + L + + L Sbjct: 101 ATQKEGRMEQEQINKLQHHLQELQAQREDQETRISTLESRYMSAQREATCLRDLNDKLEH 160 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 D R E + + R + +K + +++ Q +E EQ Sbjct: 161 RLANKDAAVRLNEEKVRSLQERLELAEKQLAQSLKKAESLPSVEAELQQRMEALTAAEQ- 219 Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + E+ ++A R R ++ R+ + + + + Sbjct: 220 ----KQLSAEEQMNRLARQVEERSAELERAVQREKMNEEHNQRLSSTVDKLLSESNDRLQ 275 Query: 444 -ITTRILQSFAYKNTL 458 +Q+ KN L Sbjct: 276 LHLKERMQALDEKNRL 291 >gi|294661197|ref|YP_003573073.1| hypothetical protein Aasi_1632 [Candidatus Amoebophilus asiaticus 5a2] gi|227336348|gb|ACP20945.1| hypothetical protein Aasi_1632 [Candidatus Amoebophilus asiaticus 5a2] Length = 846 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 29/84 (34%), Gaps = 1/84 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 +K R+ E+ + E + L ++ + A Q + R+ +++ R Sbjct: 303 EKVRRQAAERLRQEEASERLAQEEERLRQEAERAAGEERIRQEEGRLQQAAERLRQEEGR 362 Query: 427 IEFILSHKIKSCHTSVSITTRILQ 450 ++ ++ + L+ Sbjct: 363 LQQAAER-LRQEEGRLQQAAERLK 385 >gi|195385895|ref|XP_002051640.1| GJ11172 [Drosophila virilis] gi|194148097|gb|EDW63795.1| GJ11172 [Drosophila virilis] Length = 1390 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 47/182 (25%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + A ++ + L + L+ + L Sbjct: 152 WRQYLQHVQSFLACAIPEDYSSLREQQQLCAIHQNLLISQQSVLAETPLESELSEQYKAL 211 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 212 TNLHNETLSRIMQRNEELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 271 Query: 392 FLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + +L + R +Q+ +K + + + S + +S L Sbjct: 272 HLKARLDALLLQLTRGEQQSAALKAQQQELLKYCDDALATAMRMEQASINQRISNLRAAL 331 Query: 450 QS 451 ++ Sbjct: 332 ET 333 >gi|195129387|ref|XP_002009137.1| GI11425 [Drosophila mojavensis] gi|193920746|gb|EDW19613.1| GI11425 [Drosophila mojavensis] Length = 1983 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 18/177 (10%), Positives = 54/177 (30%), Gaps = 8/177 (4%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + + + + + N + S + L D+ L R +L++ + + Sbjct: 222 EEEREKQDLEMRQFLDKYENQVVSWRQQLDKKDKELEQMRKKLEQTTSGQSTSDSTSSSK 281 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI-LHM 404 + L H ++ Q I + ++ + + + + + + Sbjct: 282 QSPRQEE-------THLRHLLELREQRIESLEGQLKSMSDEMVTSTKVMNQLREQHESKK 334 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 +Q + ++ R++ + + +V + L + KRG Sbjct: 335 NPQQPNACCKLIEERLRAANARLKQLSELLDSTEQDNVLKAKQALHALNALEAYKRG 391 >gi|227811730|ref|YP_002811740.1| ribosomal large subunit pseudouridine synthase A [Vibrio cholerae M66-2] gi|254850369|ref|ZP_05239719.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MO10] gi|227010872|gb|ACP07083.1| ribosomal large subunit pseudouridine synthase A [Vibrio cholerae M66-2] gi|227014735|gb|ACP10944.1| ribosomal large subunit pseudouridine synthase A [Vibrio cholerae O395] gi|254846074|gb|EET24488.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MO10] Length = 559 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 32/124 (25%), Gaps = 11/124 (8%) Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHL 388 N ++ + + +K L I N+Q KQQ + Q + Sbjct: 125 AINQQVREQETDPELAELASALKQSQLQAEHELSQRRILHNKQRHFRKQQRL-QAEELPE 183 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSIT 445 + + Q + I L R++ + + + Sbjct: 184 KEKHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAAL 243 Query: 446 TRIL 449 + L Sbjct: 244 QKKL 247 >gi|82775699|ref|YP_402046.1| exonuclease subunit SbcC [Shigella dysenteriae Sd197] gi|309786976|ref|ZP_07681588.1| exonuclease sbcC [Shigella dysenteriae 1617] gi|81239847|gb|ABB60557.1| ATP-dependent dsDNA exonuclease [Shigella dysenteriae Sd197] gi|308924554|gb|EFP70049.1| exonuclease sbcC [Shigella dysenteriae 1617] Length = 1045 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 14/161 (8%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + R+ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRRQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|332225624|ref|XP_003261983.1| PREDICTED: dystrobrevin alpha isoform 1 [Nomascus leucogenys] Length = 743 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|320544542|ref|NP_001188694.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster] gi|318068309|gb|ADV36944.1| Muscle-specific protein 300, isoform D [Drosophila melanogaster] Length = 12345 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + L ++ + ++ Sbjct: 7698 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7757 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 7758 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7816 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7817 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7876 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7877 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7908 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + + ++ + L + LS + L Sbjct: 11095 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 11154 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 11155 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 11214 Query: 392 FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + I L +Q+K + + + + S +S L Sbjct: 11215 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 11274 Query: 450 QS 451 ++ Sbjct: 11275 KT 11276 >gi|157117698|ref|XP_001658893.1| serine/threonine protein kinase [Aedes aegypti] gi|108884560|gb|EAT48785.1| serine/threonine protein kinase [Aedes aegypti] Length = 960 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/185 (10%), Positives = 60/185 (32%), Gaps = 9/185 (4%) Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 + + + N E + + K +L N Q + Sbjct: 573 STRQEGDRKAFELHKKKEYKANKERWKRELSMDDSTPKRQRDATLQSQKDNLKQAEAQEE 632 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 R+ R+ + RK +++ +++ L + K +Q + + + +K Sbjct: 633 QRMLRVQKNYIDLEMRKFRRKKMI---LLHDLENQLLRDELSKKQQQLEQAHGML---IK 686 Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 H + LE +++ ++ + EQ + + ++ ++ ++ + Sbjct: 687 HHEKTQDLEYRQQKSVHALREEQISKQ---HESELRNQKEYMDRAERELLRRHALELKQQ 743 Query: 446 TRILQ 450 + L+ Sbjct: 744 PKSLK 748 >gi|609449|gb|AAA58727.1| amyloid precursor protein [Homo sapiens] Length = 484 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 58/212 (27%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S+IP +A + T D E Sbjct: 243 GGCGGNRNNFDTEEYCMAVCGSAIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 302 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 303 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 360 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 361 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 420 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 421 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 452 >gi|117924303|ref|YP_864920.1| chromosome segregation ATPase [Magnetococcus sp. MC-1] gi|117608059|gb|ABK43514.1| Chromosome segregation ATPases-like protein [Magnetococcus sp. MC-1] Length = 1787 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/198 (10%), Positives = 60/198 (30%), Gaps = 8/198 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D AD G + + E ++ + + L + + L + Sbjct: 702 DRTADALGEALQGQQQQLLTQLEGMEDLRQSQQEMRAAQQQGLQRGDVMQQLVESIHLRH 761 Query: 317 SDQTLSCSRYRLDRLPRELEHNL----EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 +D+ R +RL R + + E ++ + + ++ +Q + Sbjct: 762 ADRLARLQRKLANRLHRLEQQLVSANSEALLQGGQQLQQLGEAVDRQVAMMAQLQAEQIQ 821 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + QQ Q ++ ++ + ++ ++Q + ++ + +++ S Sbjct: 822 KGDAQQQSAQRLEAMNEEQQSRLQQVVELVQQAQQQARGEGEATERQLQGIAAQLQQAAS 881 Query: 433 HKIKSCHTSVSITTRILQ 450 + L Sbjct: 882 N----EQQRQGELGSQLD 895 >gi|307729325|ref|YP_003906549.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1003] gi|307583860|gb|ADN57258.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1003] Length = 1172 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 50/384 (13%), Positives = 112/384 (29%), Gaps = 22/384 (5%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139 PE G + G + T Q+ +G +E +++ + L +D+ K Sbjct: 629 PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685 Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF---PVKVQGDECPKEIANAILQ 196 + V + + L++ + + + +I + + Sbjct: 686 AAIRAEAAHSQAAQALTEVRQQAERATQRVHALQLDVLKLTQAHERYTQRSTQIREELEE 745 Query: 197 LNTLKEGRTCPRPDI-IILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWT 254 +N E + R + R G + +L F D + + + + D Sbjct: 746 INAQIEEQRALRAESEANFERYDGELAELQARFEDHQLAFEALDEELSAARGQARDLDRA 805 Query: 255 LAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 D +AA A E + +LE + + L L Sbjct: 806 ATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDALD 865 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 ++ L +R LD L +L E + + ++ +++ Sbjct: 866 IRAVKEEALHAARLELDDLTAKLRAADETRLST-----ERALQPLRDRINELQLKEQAAR 920 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRIE 428 + +Q IEQ+ + L+ K + + RI + + ++ Sbjct: 921 L-NAEQFIEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAIIALGPVNMAALDELK 979 Query: 429 FILSHK--IKSCHTSVSITTRILQ 450 K + S ++ L+ Sbjct: 980 AATERKTFLDSQSADLTSAIETLE 1003 >gi|302559694|ref|ZP_07312036.1| single-strand binding protein [Streptomyces griseoflavus Tu4000] gi|302477312|gb|EFL40405.1| single-strand binding protein [Streptomyces griseoflavus Tu4000] Length = 143 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 3/61 (4%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 KD S + +W+ + + G+ +V G++ ++ + + L G Sbjct: 48 KDGESLFLTCSVWRQAAENVAESLQRGMRVIVQGRLKQRSYEDREGVKRTVYELDVEEVG 107 Query: 115 T 115 Sbjct: 108 A 108 >gi|298674036|ref|YP_003725786.1| phosphoesterase RecJ domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298287024|gb|ADI72990.1| phosphoesterase RecJ domain protein [Methanohalobium evestigatum Z-7303] Length = 711 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 20/156 (12%) Query: 9 SLDHPEY-SVSELSYHLKHIVESNLSH-----VCVRGEISGYRGIHSSGHAYFSLKDNHS 62 + E+ +V EL L + S + V + GE+ + G F++ D Sbjct: 180 PKNIKEFHTV-ELEKELPIKLSSQIPDFIGRVVRIEGEVIQVKQTA--GPTIFTISDEAG 236 Query: 63 RIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSK-YQIIIESL-IPSG--SGTLLT 118 I ++ + + + G+IT Q+ I+S+ SG + Sbjct: 237 LITGAAFEKAGERAYPHIDSNMVVTATGEIT---SRGDEVQLEIKSMKRLSGEKESAVWE 293 Query: 119 ALEKRKKK----LLEEGLFSDQHKNPIPFIPKIIAV 150 +EK + E L + + + K +A Sbjct: 294 RIEKAIDERAEPYESEFLIESEILDKLKPGMKKVAK 329 >gi|296226301|ref|XP_002758866.1| PREDICTED: pleckstrin homology-like domain family B member 2 [Callithrix jacchus] Length = 1156 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 56/172 (32%), Gaps = 3/172 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L I+ + L++ + L + S + +LD P + L+ Sbjct: 645 LDHLNRKIAELEKNIVGEKTKEKVKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 704 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L + + E+++++ Q + + + + Sbjct: 705 QLKRDADLLDVESKHFE--DLEFQQLERESRLDEEKENLTQQLLREVAEYQRNIVSRKEK 762 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L++Q + + + ++ ++ ++ + S + Sbjct: 763 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSSLS 813 >gi|262277199|ref|ZP_06054992.1| ATP-dependent DNA helicase RecG [alpha proteobacterium HIMB114] gi|262224302|gb|EEY74761.1| ATP-dependent DNA helicase RecG [alpha proteobacterium HIMB114] Length = 683 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 59 DNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI-IIESLIPSGSGT 115 D S+ID + + N I+ + E ++ GK+T + KYQI + + + G Sbjct: 85 DEFSKIDLVFFNSRENYIKQILPLNEEVVISGKVTFYKN--KYQITNPDYIRSTDKGA 140 >gi|242240333|ref|YP_002988514.1| SMC domain protein [Dickeya dadantii Ech703] gi|242132390|gb|ACS86692.1| SMC domain protein [Dickeya dadantii Ech703] Length = 1227 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 16/183 (8%), Positives = 47/183 (25%), Gaps = 8/183 (4%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 ++ + + + L+ + + + + L Q R Sbjct: 803 QLEWLRWQENEHEHHQKQPYLSAVSADIESSQRQREETNLAIKSQHQQLAELQRSLEQAQ 862 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN--RQHILEKQQHIEQIVKQHLR 389 + + ++ ++ + IQ + HI + + +QH R Sbjct: 863 QQRWQWFGNKVVNETLTELRQRSQLLERENQQAQIQWQNSQSHISHLNGELGSLEQQHQR 922 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 LRE + ++ H++ ++ + + Sbjct: 923 ADDALNAATEQFGAALRETEFQDEADFRQAL------LDESTRHQLMMLKERLNQRQQQV 976 Query: 450 QSF 452 +S Sbjct: 977 ESV 979 >gi|320544538|ref|NP_001188692.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster] gi|318068307|gb|ADV36942.1| Muscle-specific protein 300, isoform B [Drosophila melanogaster] Length = 8382 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + L ++ + ++ Sbjct: 7698 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7757 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 7758 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7816 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7817 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7876 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7877 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7908 >gi|320544548|ref|NP_001188697.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster] gi|318068312|gb|ADV36947.1| Muscle-specific protein 300, isoform I [Drosophila melanogaster] Length = 11999 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + L ++ + ++ Sbjct: 7339 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7398 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 7399 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7457 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7458 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7517 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7518 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7549 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + + ++ + L + LS + L Sbjct: 10736 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 10795 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 10796 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 10855 Query: 392 FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + I L +Q+K + + + + S +S L Sbjct: 10856 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 10915 Query: 450 QS 451 ++ Sbjct: 10916 KT 10917 >gi|320544546|ref|NP_001188696.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster] gi|318068311|gb|ADV36946.1| Muscle-specific protein 300, isoform H [Drosophila melanogaster] Length = 11986 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + L ++ + ++ Sbjct: 7339 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7398 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 7399 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7457 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7458 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7517 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7518 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7549 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + + ++ + L + LS + L Sbjct: 10736 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 10795 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 10796 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 10855 Query: 392 FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + I L +Q+K + + + + S +S L Sbjct: 10856 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 10915 Query: 450 QS 451 ++ Sbjct: 10916 KT 10917 >gi|269926941|ref|YP_003323564.1| RNA polymerase, sigma 70 subunit, RpoD subfamily [Thermobaculum terrenum ATCC BAA-798] gi|269790601|gb|ACZ42742.1| RNA polymerase, sigma 70 subunit, RpoD subfamily [Thermobaculum terrenum ATCC BAA-798] Length = 596 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 17/217 (7%) Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 V+ I+ I + + +G E D +L D+ D +AP P AA ++ L Sbjct: 377 VQKISQEPISLENPVGEEEDTSLGDFIQDHKAPAPMDAAS----------------QSLL 420 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 + I +++K+ +L D R L ++ Sbjct: 421 RDQIDQVLKHLSERERGVLLMRFGLDCEPRPYREVAHILAVSPNQVMQAESRVLDMVAAR 480 Query: 353 IINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + L +R + E+ ++ ++ + LR I + +E +A + + + Sbjct: 481 LSPEDYQMLLDRFGHLDRSPMSEESFRLKYKLTQTQLREIDQKLREALASVMLHVPAPER 540 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + + R + + Sbjct: 541 DMMRFRFGLDIGQPRTLEEVGRAFGVTRERIRQIESK 577 >gi|196249927|ref|ZP_03148622.1| DNA polymerase III, alpha subunit [Geobacillus sp. G11MC16] gi|196210441|gb|EDY05205.1| DNA polymerase III, alpha subunit [Geobacillus sp. G11MC16] Length = 1093 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 5/92 (5%) Query: 29 ESNLSHVCVRGEISGYRGIHSS-G--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85 E + S V V G I+ R + G A+ ++ D ++A+ + + EEG Sbjct: 936 EVHGSPVVVGGCIAELRKTRTKFGEEMAFITVSDESGELEAVAFPSVYARAAGELEEGNF 995 Query: 86 FLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 L+ G + + + Q+++ L Sbjct: 996 VLLAGTVDM--RAGRRQLVLRRAERLPVSALY 1025 >gi|47215101|emb|CAF98175.1| unnamed protein product [Tetraodon nigroviridis] Length = 911 Score = 39.0 bits (89), Expect = 1.9, Method: Composition-based stats. Identities = 13/175 (7%), Positives = 47/175 (26%), Gaps = 4/175 (2%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + + +K L K N D + ++L Sbjct: 90 LWEETCTYITHCHSRIEWVWLHWSEYLKAIEEFEAWLSKHQRNLDVRIELQLGLKEKL-- 147 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + + + + + +HN ++ + Q+ +++ +R Sbjct: 148 WQVDQQRVALSDIHGQAGLLERLLDEAAALHNRTQDPSVEAQAQERLQEAYND-VRDRAE 206 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 E+ + + + + + + + R+ ++ S + + Sbjct: 207 ERLALLHRMAEEHQTFQECVKRFQSWLLTETKRLTTLMERD-DSAQDKLRALQAL 260 >gi|297275172|ref|XP_001102769.2| PREDICTED: dystrobrevin alpha [Macaca mulatta] Length = 770 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 446 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 505 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 506 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 565 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 566 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 598 >gi|258620242|ref|ZP_05715281.1| GGDEF family protein [Vibrio mimicus VM573] gi|258587600|gb|EEW12310.1| GGDEF family protein [Vibrio mimicus VM573] Length = 411 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 25/240 (10%), Positives = 62/240 (25%), Gaps = 28/240 (11%) Query: 234 RAIANSSIPIISAIGHETDW-----------------TLADYAADLRA---PTPTGAAEM 273 A S++ I +G E+ T D + + + Sbjct: 15 FACTISTVLIWKMVGLESSIKGMAEIMESFQWDKFFETGIDEVDEQHQYLVNIVNRYSSL 74 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 L + L + + + L + +Q + R + + Sbjct: 75 LAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSFMSEVFS 133 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 ++ + + + + L + RQ + + Sbjct: 134 MQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRSGMSAKEAYAK 187 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E++EK A L + ++L+ + L K+ + R L++ + Sbjct: 188 EEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQLYQANRQLEALS 246 >gi|73998466|ref|XP_544006.2| PREDICTED: similar to serine/threonine kinase 2 isoform 1 [Canis familiaris] Length = 1242 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 925 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 984 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 985 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1038 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1039 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1078 >gi|288560822|ref|YP_003424308.1| archaea-specific RecJ-like exonuclease [Methanobrevibacter ruminantium M1] gi|288543532|gb|ADC47416.1| archaea-specific RecJ-like exonuclease [Methanobrevibacter ruminantium M1] Length = 780 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 10/101 (9%) Query: 14 EYSVSELSYHLKHI----V-ESNLSH-VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAI 67 EY V +LS ++ + ES+L V V GE+ +SG F++ D S A Sbjct: 218 EYVVKKLSKNIGRTKIETLDESSLKSIVKVYGEVIQI--QQTSGPTIFTITDETSITWAA 275 Query: 68 IWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESL 108 + ++ E G VIG++ + + QI ES+ Sbjct: 276 AFNEPGVRMYPEIEVGDIVEVIGEVN--QHNGEIQIESESI 314 >gi|195034074|ref|XP_001988821.1| GH10368 [Drosophila grimshawi] gi|193904821|gb|EDW03688.1| GH10368 [Drosophila grimshawi] Length = 3957 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 46/182 (25%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + A ++ + L + LS + L Sbjct: 2707 WRQYLQHVQSFLACAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2766 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 2767 TNLHNETLSRIMQRNDELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 2826 Query: 392 FLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + +L + R +Q+ + + + + S + +S L Sbjct: 2827 HLKARMDALLLQLARGEQQSAALKAQQQQLLPYCDDALATAMRMEQASINQRISNLRAAL 2886 Query: 450 QS 451 ++ Sbjct: 2887 ET 2888 >gi|149689692|ref|XP_001497765.1| PREDICTED: STE20-like kinase (yeast) isoform 2 [Equus caballus] Length = 1211 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 48/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 891 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNMLKNRKKEEQEFVQKQQQELDGS 950 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 951 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 1007 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L + + Sbjct: 1008 FMQRHQLLKRHEKETEQMQRYNQRLIEELKTRQTQERARL 1047 >gi|149411138|ref|XP_001515697.1| PREDICTED: similar to dystrobrevin, alpha, isoform 3 [Ornithorhynchus anatinus] Length = 743 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 45/155 (29%), Gaps = 10/155 (6%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 N + L + + + F I ++ RQ I Sbjct: 418 SNPSRMLDSPNRLDEEHRLIARYAARLAAETSSSQPGQQRGASDISFTIDANKQQRQLIA 477 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432 E + +I+++ R ++ ++ + L +L R+ + Sbjct: 478 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 537 Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 538 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|86743196|ref|YP_483596.1| single-stranded DNA-binding protein [Frankia sp. CcI3] gi|86570058|gb|ABD13867.1| single-strand binding protein [Frankia sp. CcI3] Length = 186 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 9/62 (14%), Positives = 25/62 (40%), Gaps = 8/62 (12%) Query: 58 KDNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI---TTFPGSSK----YQIIIESLI 109 KD + + IW+ + ++G +V G++ + + ++ ++ + Sbjct: 48 KDGEALFLRCSIWRQAAEHVAESLQKGARVIVTGRLKQRSFETREGEKRTVIELDVDEIG 107 Query: 110 PS 111 PS Sbjct: 108 PS 109 >gi|59710083|ref|NP_001011731.1| hyaluronan mediated motility receptor [Takifugu rubripes] Length = 834 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 17/178 (9%), Positives = 49/178 (27%), Gaps = 2/178 (1%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 V ++ + + ++ + + + L R + Sbjct: 500 VKERDEALRQREEQRGQSVAQLQDEMEKAQKLMEEVSHEKEEIREQLQHERQEKATIHAA 559 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L+ E + H +K + + + R+ ++ +H Q + + Sbjct: 560 LQEKSEALESECINHQETRSELLKLQAELEKVCEERKTLVSHVEHANQSRLDVEKQLEKA 619 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 ++ + + L EQ + + + L L +++ LQ Sbjct: 620 EQLRNQLQAHLEEQQQKDVHFQTQL--DLSQEKNQSLRRELEQQREGSRALQEQLQVL 675 >gi|70729273|ref|YP_259010.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5] gi|68343572|gb|AAY91178.1| chromosome segregation SMC protein [Pseudomonas fluorescens Pf-5] Length = 1162 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L +Q + R E E+ ++ I + Sbjct: 245 GQRESVIGSQEVSFEALVAEQRNADAAIERFRDGHHELSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLKEAERARLE 330 >gi|297297158|ref|XP_001086697.2| PREDICTED: a-kinase anchor protein 13-like [Macaca mulatta] Length = 2756 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 17/205 (8%), Positives = 56/205 (27%), Gaps = 17/205 (8%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2415 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNANLVFMLKRNSEQVVQSIVHLHEL 2474 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ R + + +++K RQ + Q+ Sbjct: 2475 LSTLQGVVLQQDSYIEDQKLVLSERALTRTLSRPSSLIEQEKQRSLEKQRQDLANLQKQQ 2534 Query: 381 EQ----------------IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 Q + + +++EK+ E+ + + + + Sbjct: 2535 AQYLEEKRRREREWEARERELREREALLAQREEKVQQGQQDLEKEREELQQKKGTYQYDL 2594 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ +++ + L Sbjct: 2595 ERL-RAAQKQLEREQEQLRREAERL 2618 >gi|307173985|gb|EFN64703.1| Serine/threonine-protein kinase MRCK beta [Camponotus floridanus] Length = 1877 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 16/163 (9%), Positives = 52/163 (31%), Gaps = 11/163 (6%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE---------LEHNLEIIIFRKYR 348 ++ + L + L N + ++ ++ + + L + + Sbjct: 792 NRLQGERRQLEDEYEELRNKKEAIAQWEAQITEIIQWVSDEKDARGYLQALATKMTEELE 851 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 H S + + Q ++++ +L+ + + + + Sbjct: 852 FLKHSGGISGSVGSGTTLTDKNWR-NRRSQKLDKMELLNLQSSLQSEIQAKQAISEELTK 910 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 T++ + +K L R++ +SH++K + L + Sbjct: 911 TRSDLIAAQKELKDLKQRLDT-MSHELKRKDMQIKELQARLDT 952 >gi|261344278|ref|ZP_05971922.1| cell division protein MukB [Providencia rustigianii DSM 4541] gi|282567881|gb|EFB73416.1| cell division protein MukB [Providencia rustigianii DSM 4541] Length = 1479 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 17/179 (9%), Positives = 51/179 (28%), Gaps = 9/179 (5%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + L +L + + + K L AL + + ++ + ++ Sbjct: 424 NRARELCQLPDLTIENADEWLETFEAKEQQATESLLALEQKMSVADAAHSQFEQAYQLVK 483 Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + + + L +Q R + E QQ ++ Sbjct: 484 TMVGDVSRSEAYQQARTLLRDWSSQQHLAERVQPLRMQLSELQQRLDSQKNAEKVLNEFC 543 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448 K+ + + + L + + R+E + +++ +S + Sbjct: 544 KRHGQSYEPDELDGLMAELEALQEELSLGVSESGERRME--MRQELEQIRQRISQLSAK 600 >gi|195385902|ref|XP_002051643.1| GJ11158 [Drosophila virilis] gi|194148100|gb|EDW63798.1| GJ11158 [Drosophila virilis] Length = 8387 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 59/212 (27%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + +L + + + Sbjct: 7703 HFNIQKLSHAIGNVQSQNSDLSLVNQQAQSLIRQADARNRQLIEQDNAALNRDWQDLVHS 7762 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R +L +L + + E + + + ++ ++ +++ + Q + Sbjct: 7763 LEQRRDKLQQLAEHWD-SFENGLHGWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7821 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + +++ L Sbjct: 7822 REESNELKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQSKLNDTLRDKDQQ 7881 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7882 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7913 >gi|15676451|ref|NP_273590.1| hypothetical protein NMB0545 [Neisseria meningitidis MC58] gi|7225771|gb|AAF40974.1| conserved hypothetical protein [Neisseria meningitidis MC58] gi|325139802|gb|EGC62335.1| chromosome segregation protein SMC [Neisseria meningitidis CU385] Length = 1161 Score = 39.0 bits (89), Expect = 2.0, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWRQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|254282002|ref|ZP_04956970.1| peptidase s1, chymotrypsin:pdz/dhr/glgf [gamma proteobacterium NOR51-B] gi|219678205|gb|EED34554.1| peptidase s1, chymotrypsin:pdz/dhr/glgf [gamma proteobacterium NOR51-B] Length = 368 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 30/95 (31%), Gaps = 12/95 (12%) Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF 472 I+ + R+ L + T R L G I + + Sbjct: 58 IYTAKLVSQGRTARLNDPLLRRFPEPSTRRQRVERSL-----------GSGVIMTADGHI 106 Query: 473 ITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKE 506 IT +A I + DG+ ANA V+ P + Sbjct: 107 ITNNHVIAEADAIQVLLADGRSANAAVVGTDPATD 141 >gi|149203783|ref|ZP_01880752.1| Putative trypsin-like serine protease [Roseovarius sp. TM1035] gi|149142900|gb|EDM30942.1| Putative trypsin-like serine protease [Roseovarius sp. TM1035] Length = 383 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%) Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAP 503 L G+ + +T + + + DG+A +A VI P Sbjct: 110 LGSGFII--SEDGKIVTNNHVVEGAETVTVKLADGRAFDATVIGSDP 154 >gi|330502844|ref|YP_004379713.1| condensin subunit Smc [Pseudomonas mendocina NK-01] gi|328917130|gb|AEB57961.1| condensin subunit Smc [Pseudomonas mendocina NK-01] Length = 1162 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 42/146 (28%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTQENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLLALRWQGLNQQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 S + Q+ L +Q + LR E E+ ++ I + Sbjct: 245 GSREQVIGDQEVAFEALVAEQRSADAAIERLRDGHHELSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAEKARLE 330 >gi|255036177|ref|YP_003086798.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Dyadobacter fermentans DSM 18053] gi|254948933|gb|ACT93633.1| polynucleotide adenylyltransferase/metal dependent phosphohydrolase [Dyadobacter fermentans DSM 18053] Length = 471 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 43/372 (11%), Positives = 88/372 (23%), Gaps = 63/372 (16%) Query: 92 ITTFPGSSKYQIIIESLIPSGSGTLLTAL--EKRKKKLLEEGLFSDQHKNPIPFIPKIIA 149 ++ F QI L G + E RK + + L DQ++ I+ Sbjct: 71 VSVFKNFGTAQIRQGDLEIEFVGARKESYRSESRKPAVEDGTLADDQNRRDFTINAMGIS 130 Query: 150 VITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRP 209 + G ++ R + ++ + P + AI + L Sbjct: 131 LNAGTFGELVDPFEGMSDLRKKIIRTPLDPEITFSDDPLRMMRAIRFASQLNFDIEPDTF 190 Query: 210 DIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTG 269 D I+ + SI + +DE Sbjct: 191 DAIVKMKDRISIVSMERISDE------------------------------------LNK 214 Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329 P L A + ++ L + ++ Q L D Sbjct: 215 IIRSKTPSYGFKLLYHAGLLAIIFPEMVELQGVEHIEGKGHKDNFYHTLQVLDNVAQVSD 274 Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 L L I + F+ + E + ++ + ++ Sbjct: 275 DLWLRWAAILHDIAKPATKKFDKRHGWSFHNH------------EEVGARMVPVIFRRMK 322 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI- 448 EK + L L + I I + + + + + Sbjct: 323 LPLNEKMRFVKKLVRLHLRP---IVLSKEEIT------DSAMRRLLVEAGEDIEALMNLC 373 Query: 449 ---LQSFAYKNT 457 + S + Sbjct: 374 RADITSKNPEKV 385 >gi|218246306|ref|YP_002371677.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801] gi|218166784|gb|ACK65521.1| chromosome segregation protein SMC [Cyanothece sp. PCC 8801] Length = 1226 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 11/151 (7%), Positives = 48/151 (31%), Gaps = 3/151 (1%) Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 L Q L + + +E ++ + + + + Q++ Sbjct: 348 QRNQLEQRQQELLTLTQQNQKSLQETQNTIAQLEHNLTHLTQETLELDNNTIPFLIQQRD 407 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R + + +++++ ++ + T N + + ++ Sbjct: 408 RTRQTLEMVRTQANAIAEASDAWVQEQSALSRKITAIQDTLNPQRTQQAKLNERRQQLNK 467 Query: 430 ILSH---KIKSCHTSVSITTRILQSFAYKNT 457 + + +++ T ++ + L + +++ T Sbjct: 468 TIDNETQQLQEIETELNSQHQELNTLSHQAT 498 >gi|157137156|ref|XP_001663913.1| myotonin-protein kinase [Aedes aegypti] gi|108869781|gb|EAT34006.1| myotonin-protein kinase [Aedes aegypti] Length = 1608 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 17/173 (9%), Positives = 59/173 (34%), Gaps = 7/173 (4%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + NL L + + + + +A ++ +S + ++ Sbjct: 629 RDQLTEADNLREMLQIELQQAHT-QRTKSTNKRQAFSQWERQISEIIQWVSD-EKDARGY 686 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L+ + + + + S L HN + Q ++++ +L+ + + Sbjct: 687 LQALATKMTEELEFLKH---SGSLNHNSSDKNWR-NRRSQKLDKMELLNLQSSLQNEIQA 742 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 A++ +T+ + +++ I ++++K + + L++ Sbjct: 743 KALISEELTRTRTDLVAAQKDLREARQ-ICESFNNELKRKEGQIKELQQRLET 794 >gi|194017300|ref|ZP_03055912.1| DNA polymerase III subunit alpha [Bacillus pumilus ATCC 7061] gi|194011168|gb|EDW20738.1| DNA polymerase III subunit alpha [Bacillus pumilus ATCC 7061] Length = 1111 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 18/143 (12%) Query: 20 LSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFL 79 LS ++K V ++ + + + R + A+ + D ++ +++ K+ L Sbjct: 944 LSSYIKRKV--SMGGLLTK--VKSIRTKNGQSMAFITFGDETGEMEGVVFPEQFRKLSPL 999 Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIES---LIPSGSGTLLTALEKRKKKLLEEGLFSDQ 136 EEG V G+I SS QII++ L G+ E ++ EE Sbjct: 1000 LEEGAMLYVEGRIDVRNDSS--QIIVQEAVLLEEMGT----QRKESVYIRVKEE-----N 1048 Query: 137 HKNPIPFIPKIIAVITSPTGAVI 159 H + K + + S V Sbjct: 1049 HTQELLEQVKRVISMHSGEADVY 1071 >gi|149202134|ref|ZP_01879107.1| putative dna polymerase iii alpha chain protein [Roseovarius sp. TM1035] gi|149144232|gb|EDM32263.1| putative dna polymerase iii alpha chain protein [Roseovarius sp. TM1035] Length = 124 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 4/68 (5%) Query: 44 YRGIH--SSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKY 101 R + G + +L+D I+ +IW+ ++ G V G++ S Sbjct: 36 VRQRPGTARGVVFVTLEDETGTINVVIWRKVFDRFRRAVIAGRMLRVTGRVE--RQSGVT 93 Query: 102 QIIIESLI 109 ++ E + Sbjct: 94 HLVAEEIE 101 >gi|307197024|gb|EFN78396.1| Nuclear receptor corepressor 2 [Harpegnathos saltator] Length = 1436 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 20/205 (9%), Positives = 59/205 (28%), Gaps = 15/205 (7%) Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 G E +L D A + P ++ + + + + + Sbjct: 821 GLEAFSSLVDVAVQQPSLPVP------HPHGHPAAAAAAAATKQEMRLQEHRMMQAEHRM 874 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + D+ L+ R + + + ++ + I + + L + Sbjct: 875 AAAVAHHHQRDRDLAHLREKEEHRLHREKELQQLEHRLVVQQREKEIQQQEHARLAQQRE 934 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 K+ QH+ ++ Q ++ ++ Q + + + H + R Sbjct: 935 KDMQHVE------HRLPMQQREKEMQHEQHRLVPSIGTVHQHREKELHRHQLVVAAAQRD 988 Query: 428 EFILSHKIKSCHTS---VSITTRIL 449 + H++ + + L Sbjct: 989 KEHQEHRLIVQQHREKEIQQQEQRL 1013 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 18/206 (8%), Positives = 56/206 (27%), Gaps = 18/206 (8%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 A + + L + ++ + K ++ L D Sbjct: 880 HHHQRDRDLAHLREKEEHRLHREKELQQLEHRLVVQQREKEIQQQEHARLAQQREKDMQH 939 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL------------IHNIQKN 369 R + + +E++H ++ H + L H + Sbjct: 940 VEHRLPMQQREKEMQHEQHRLVPSIGTVHQHREKELHRHQLVVAAAQRDKEHQEHRLIVQ 999 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + E QQ +++ R ++++ + + +++Q + + + + + Sbjct: 1000 QHREKEIQQQEQRLTIHQQREKDIQRERDLVHMQQIQQQQQQQQQQQQQMQQHMQQQRME 1059 Query: 430 ILSHKI------KSCHTSVSITTRIL 449 I + + + L Sbjct: 1060 AERRHIVQMYREQHQQQQIDRESSRL 1085 >gi|148693707|gb|EDL25654.1| mCG130210 [Mus musculus] Length = 1436 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 47/149 (31%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + +E E +K + S + Sbjct: 764 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 823 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 R+H ++ ++++ ++H + + ++ A R + +++ R Sbjct: 824 VEREH----ERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERE 879 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 880 LESMRQEQDQQLEDLRRRHRDHERKLQDL 908 >gi|146307770|ref|YP_001188235.1| condensin subunit Smc [Pseudomonas mendocina ymp] gi|145575971|gb|ABP85503.1| condensin subunit Smc [Pseudomonas mendocina ymp] Length = 1162 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 42/146 (28%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTQENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLLALRWQTLNQQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 S + Q+ L +Q + LR E E+ ++ I + Sbjct: 245 GSREQVIGDQEVAFEALVAEQRSADAAIERLRDGHHELSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAEKARLE 330 >gi|329944198|ref|ZP_08292457.1| trypsin [Actinomyces sp. oral taxon 170 str. F0386] gi|328530928|gb|EGF57784.1| trypsin [Actinomyces sp. oral taxon 170 str. F0386] Length = 570 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506 I D + IT +A+ ++I + DG+ A P + Sbjct: 281 VIFDKEGHIITNNHVVASASQIQVTLADGRVYEAETTGTDPATD 324 >gi|320095529|ref|ZP_08027194.1| hypothetical protein HMPREF9005_1806 [Actinomyces sp. oral taxon 178 str. F0338] gi|319977535|gb|EFW09213.1| hypothetical protein HMPREF9005_1806 [Actinomyces sp. oral taxon 178 str. F0338] Length = 649 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 17/42 (40%), Gaps = 5/42 (11%) Query: 464 SIQDTNNNFITQ----KRNLATKTRILINFFDGQA-NAIVIN 500 + D + +T + + +I + DG+ +A V+ Sbjct: 349 VVYDAKGDIVTNYHVIAAAVQSGGKIQVTLADGRIYDAEVVG 390 >gi|294637118|ref|ZP_06715429.1| putative sensor/kinase in regulatory system [Edwardsiella tarda ATCC 23685] gi|291089689|gb|EFE22250.1| putative sensor/kinase in regulatory system [Edwardsiella tarda ATCC 23685] Length = 903 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 26/237 (10%), Positives = 62/237 (26%), Gaps = 34/237 (14%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + ++ +NN + + + L + T +L Sbjct: 382 LHKIAAMADRHHGKVQVSINNAMYEVQMVRSQQTPHSALFLIRNLDTEVLMSQKLKLAHE 441 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 E E NL + + +++ + + + ++ + + L Sbjct: 442 EYEKNLTARKTMTDNLSHELQAPLRAIS---RLSTALREAPNQAALLDDLWLESQHAQRL 498 Query: 394 EKKEKIAILHMLR-EQTKNRIFYLHTHIKKLITRIEFILSHK------------IKSCHT 440 + + + + R F LH HI L+ R + K + Sbjct: 499 IDEITLLTAVESQDWHPQTRQFRLHEHIDALLLRNLPAMRRKGLMLLGRVDTDPAQQFDG 558 Query: 441 SVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATK------TRILINFFD 491 ++ R+L+ L Y + +L R+ + D Sbjct: 559 DIATLERVLEML-----LH--YAIVTTAYGKI-----SLTIGLDPQQPDRLHVQLSD 603 >gi|242010332|ref|XP_002425922.1| Nesprin-1, putative [Pediculus humanus corporis] gi|212509905|gb|EEB13184.1| Nesprin-1, putative [Pediculus humanus corporis] Length = 8614 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 61/195 (31%), Gaps = 11/195 (5%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS----C 323 + + + P ++ R N I + + L+S + L + + Sbjct: 263 SLMQDRSFPNSLPEIKRMVAESNRFRNEEIPAKQREKQRLHSAFRDLTKHHDSYNDFDLE 322 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ----HILEKQQH 379 +D + + L+ + + K L + + + + E +Q Sbjct: 323 PELHIDNIEKNWTRLLKAHQDKDLAIQEELKRLEKLQRLADKVHREMKQVDTRLEELEQQ 382 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-RIEFI--LSHKIK 436 IE + R ++ K + L M + I Y+ + ++ L R L +++ Sbjct: 383 IEVESTRLDRLHPVDAKNIVEQLQMNIRMVEENIQYILSDVQYLREARYPQAPELYKRVE 442 Query: 437 SCHTSVSITTRILQS 451 +L S Sbjct: 443 RLRQRWESLQNLLHS 457 >gi|87302289|ref|ZP_01085114.1| Na/Pi-cotransporter family protein [Synechococcus sp. WH 5701] gi|87283214|gb|EAQ75170.1| Na/Pi-cotransporter family protein [Synechococcus sp. WH 5701] Length = 544 Score = 39.0 bits (89), Expect = 2.1, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 15/148 (10%) Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + L + +L+ + R +S L RQ +L + Sbjct: 395 RRLDEPEAQRLLHLLHSLDHLQRLHERCEEEPERASTVRQSGALQR----ERQDLLAALE 450 Query: 379 HIEQIVKQHL-----RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 +E +V+ R + + LR+ + ++ R+E I Sbjct: 451 QLEPLVEAQQWGEVARRSQATGRSLHRRVKPLRQGVMAEVASGGVEVELASQRLEAI--R 508 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRG 461 ++ + + L++ L RG Sbjct: 509 WLRRVSQHLGRISGHLEA----AALARG 532 >gi|220931624|ref|YP_002508532.1| DNA polymerase III, alpha subunit [Halothermothrix orenii H 168] gi|219992934|gb|ACL69537.1| DNA polymerase III, alpha subunit [Halothermothrix orenii H 168] Length = 1397 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 30/80 (37%), Gaps = 3/80 (3%) Query: 33 SHVCVRGEISGYRGI--HSSGHAY-FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89 V ++GE+ + Y F++ D S I + + ++ +V Sbjct: 204 QGVVIKGEVFNLEERVTRRGKYLYIFAVTDRSSSITCKFFIDDKSDLKSTLNNEDWVMVK 263 Query: 90 GKITTFPGSSKYQIIIESLI 109 G++ S++ I+ S+ Sbjct: 264 GRVQFDTYSNEIVIMCNSIE 283 >gi|312962452|ref|ZP_07776943.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6] gi|311283379|gb|EFQ61969.1| chromosome segregation protein SMC [Pseudomonas fluorescens WH6] Length = 1162 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 41/146 (28%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + +++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKGEERQLKAQLSALRWQALNDQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 I Q+ L +Q + LR + E+ ++ I + Sbjct: 245 GQREAIIGTQEISFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLKEAERARLE 330 >gi|299136388|ref|ZP_07029571.1| metal dependent phosphohydrolase [Acidobacterium sp. MP5ACTX8] gi|298600903|gb|EFI57058.1| metal dependent phosphohydrolase [Acidobacterium sp. MP5ACTX8] Length = 343 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 6/73 (8%) Query: 46 GIHSSGHAYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI 103 SG Y +L D + +A +W+ ++ EG V G+++ + K+QI Sbjct: 31 RKAGSG-QYLALTLADKTGQFEARMWEDFAEAVQQC-TEGSYVKVQGQVSKY--QGKFQI 86 Query: 104 IIESLIPSGSGTL 116 + + + + Sbjct: 87 TLNKMRLAADSEI 99 >gi|257887529|ref|ZP_05667182.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium 1,141,733] gi|257823583|gb|EEV50515.1| single-stranded-DNA-specific exonuclease RecJ [Enterococcus faecium 1,141,733] Length = 765 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 9/146 (6%) Query: 40 EISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FP 96 +++ + I ++ H F L D S++DA+ + E + V+GK++ + Sbjct: 488 QVANVKKIGANQQHLKFVLSDESSQLDAVAFGFGTQ--EEELLNNL-VDVVGKLSINEWN 544 Query: 97 GSSKYQIIIESLIPSGS--GTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSP 154 G K Q+++ G + + + E+ L+ + + F+P+ I T+ Sbjct: 545 GRKKPQLMVSDFAVGGLQVFDWRAKRFREQSRTSEDSLYLAFDSSTLKFVPESIQE-TAI 603 Query: 155 TGAVIRDILQRISCRFPLRVIIFPVK 180 + I I R P ++I Sbjct: 604 VFEGMDFIQAVIEKRKPKSLVIMDCP 629 >gi|326433435|gb|EGD79005.1| hypothetical protein PTSG_01976 [Salpingoeca sp. ATCC 50818] Length = 6230 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 49/129 (37%), Gaps = 6/129 (4%) Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 ++ R+ L + LE + +K + ++ ++ + ++ + Q+ E Sbjct: 5443 EEAKKRMAELEQAHLKRLEELEAQKQAQMKELSQKVDAEI----TEAQQKAEADLQKRRE 5498 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + ++ + + E++ A L E+ + + + ++ +R++ + ++ Sbjct: 5499 ESMQAAEQRMREEQERAKAQLSP--EEFEKFMNKHRQQLSEVQSRLDKTQQAQRQALQER 5556 Query: 442 VSITTRILQ 450 + + Sbjct: 5557 LKKQRERRR 5565 >gi|332160705|ref|YP_004297282.1| exonuclease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664935|gb|ADZ41579.1| exonuclease [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 1229 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 62/194 (31%), Gaps = 8/194 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 A +A Q L + + LI + ++L L L + ++ +L+ Sbjct: 336 ANLARQQHATNQHEQETLIEQKVVPLDNLIAQQQHSLMLLGTQLEQLRTKENQNKQQLEL 395 Query: 331 LPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 ++ + + + H + + + + Q + + ++Q + Q Sbjct: 396 NKQQFKLAHQRLQQLTEYTQQHAHHQHWEKNLPLWREQFRQLQMQQQQSVESEQQLQQQA 455 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI 448 + +++I L+ +Q + + H+ + ++ + + + + Sbjct: 456 TLLATLQQQIDTLNEQDKQQQAALVQAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQ 515 Query: 449 ------LQSFAYKN 456 L + + Sbjct: 516 RPVRQQLAALSPLA 529 >gi|322815516|gb|EFZ24159.1| hypothetical protein TCSYLVIO_9712 [Trypanosoma cruzi] Length = 4214 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 13/192 (6%), Positives = 51/192 (26%), Gaps = 9/192 (4%) Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 + ++ + P + + ++++ E + + Sbjct: 310 SPFSAMAFVQYQPVPYRADLPTSRIELHVDRLRAVLSREEWAILLALWREA----RDGEE 365 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + + + D + +++ + R + + + ++ R Sbjct: 366 YDVLRHFRPVGAEKKRPTDNARAWWTYAIQVTLHRIRQVRERRVFVWEKY---KRLKAAR 422 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + + + + + + L +EK + + E I + T +E Sbjct: 423 EEYMTLFKRDRRRQLKAIWLTELTMEEKTRLQDLEMELPMESIKIAR-RLAYHRTHLERE 481 Query: 431 LS-HKIKSCHTS 441 ++ Sbjct: 482 QRETLLERRRQQ 493 >gi|302541166|ref|ZP_07293508.1| single-strand binding protein [Streptomyces hygroscopicus ATCC 53653] gi|302458784|gb|EFL21877.1| single-strand binding protein [Streptomyces himastatinicus ATCC 53653] Length = 157 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKIT--TFP-----GSSKYQIIIESLIPS 111 + +W+ + + G+ +V+G++T + S Y+I E + PS Sbjct: 55 LGVAVWRQQAEHVAESVQRGMRVIVVGRLTQRQYEATDGSKRSSYEIQAEEVAPS 109 >gi|289434854|ref|YP_003464726.1| DNA polymerase III, alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171098|emb|CBH27640.1| DNA polymerase III, alpha subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 1108 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 3/75 (4%) Query: 35 VCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT 94 V V EI R + ++ D+ + A+++ + K ++G + K T Sbjct: 960 VYVH-EIKSIRTKKGETMCFLTISDDTKELSAVMFPESYRKYASFAQKGQILFLQVKADT 1018 Query: 95 FPGSSKYQIIIESLI 109 + + Q+II Sbjct: 1019 --RNGELQLIINQAE 1031 >gi|323945296|gb|EGB41352.1| exonuclease SbcC [Escherichia coli H120] Length = 1047 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 14/161 (8%), Positives = 38/161 (23%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + + + Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|322799789|gb|EFZ20986.1| hypothetical protein SINV_06721 [Solenopsis invicta] Length = 841 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 28/235 (11%), Positives = 65/235 (27%), Gaps = 19/235 (8%) Query: 214 LARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLA-------DYAADLRAPT 266 G S ++ E A +S++ I ++ D + D Sbjct: 618 CLEGCASKKESVIEVTEKSCEASCDSAMEDCDGISKNPLEVISLECGTEFDKSCDCDLKE 677 Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 P + SS + + + K N + Sbjct: 678 ERSECMTVCPPEPEKSSSCEGSQNDCSTSAESTVDEKPNERKRTRSMCEIRNPHHRRQLR 737 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 RL + + I + + ++ +K+R + + ++ Sbjct: 738 RL------------AKMRAISVVIDAAIAMVSRNDVLRRTKKSRHRDRIATKKLYNLLTT 785 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 L Y K E+ + L + +++ ++ I R++ L+ K+K Sbjct: 786 RLPYSKNRKVEEYLLKRSLGGKLNDKVLKRQRKQQEQIFRLKKQLTRKLKGKEAR 840 >gi|229553938|sp|Q5DU05|CE164_MOUSE RecName: Full=Centrosomal protein of 164 kDa; Short=Cep164 Length = 1446 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 47/149 (31%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + +E E +K + S + Sbjct: 774 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 833 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 R+H ++ ++++ ++H + + ++ A R + +++ R Sbjct: 834 VEREH----ERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERE 889 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 890 LESMRQEQDQQLEDLRRRHRDHERKLQDL 918 >gi|160420304|ref|NP_001074842.2| centrosomal protein of 164 kDa [Mus musculus] Length = 1333 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 47/149 (31%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + +E E +K + S + Sbjct: 661 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 720 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 R+H ++ ++++ ++H + + ++ A R + +++ R Sbjct: 721 VEREH----ERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERE 776 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 777 LESMRQEQDQQLEDLRRRHRDHERKLQDL 805 >gi|281338611|gb|EFB14195.1| hypothetical protein PANDA_017490 [Ailuropoda melanoleuca] Length = 517 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 4/134 (2%) Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L + +L L+ + K + +R+ + I +Q+ +H+ + Sbjct: 247 LKQEQQKLKEAANSEHLTLQA-LTEKLLQSEEVTSRLPEE--IRKLQEELRHLETEALRA 303 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 E+ E +EK L + ++ + + T + +E +L+ ++ Sbjct: 304 EEDGVYKHSASLAELQEKSQGLDSRLQSVEDGVDAVQTASARHSENLEALLARSVEQ-EQ 362 Query: 441 SVSITTRILQSFAY 454 ++ + Sbjct: 363 RLAALQERVAGLGP 376 >gi|157155185|ref|YP_001461575.1| exonuclease subunit SbcC [Escherichia coli E24377A] gi|157077215|gb|ABV16923.1| nuclease SbcCD, C subunit [Escherichia coli E24377A] Length = 1047 Score = 39.0 bits (89), Expect = 2.2, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 41/161 (25%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + RQ I E ++ + +H + ++ Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMVLRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|262165480|ref|ZP_06033217.1| GGDEF family protein [Vibrio mimicus VM223] gi|262025196|gb|EEY43864.1| GGDEF family protein [Vibrio mimicus VM223] Length = 406 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 18/186 (9%), Positives = 50/186 (26%), Gaps = 8/186 (4%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 + + L + L + + + L + +Q + R Sbjct: 64 NRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSF 122 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + + ++ + + + + L + RQ + + Sbjct: 123 MSEVFSMQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRSGMSA 176 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 E++EK A L + ++L+ + L K+ + R Sbjct: 177 KEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQLYQANR 235 Query: 448 ILQSFA 453 L++ + Sbjct: 236 QLEALS 241 >gi|256020364|ref|ZP_05434229.1| exonuclease subunit SbcC [Shigella sp. D9] gi|332281541|ref|ZP_08393954.1| nuclease SbcCD [Shigella sp. D9] gi|332103893|gb|EGJ07239.1| nuclease SbcCD [Shigella sp. D9] Length = 1047 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 41/161 (25%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + RQ I E ++ + +H + ++ Q +R Sbjct: 299 IAEHSAALAHTRQQIEEVNTRLQSTMVLRASIRHHAANQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|268316816|ref|YP_003290535.1| SMC domain-containing protein [Rhodothermus marinus DSM 4252] gi|262334350|gb|ACY48147.1| SMC domain protein [Rhodothermus marinus DSM 4252] Length = 1019 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 16/186 (8%), Positives = 55/186 (29%), Gaps = 16/186 (8%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + + + ++ T A+ L + L + + + Sbjct: 449 RCRELEQQEARYRALQEELERLKETGQGKKAAIEALQARLQELERQQQDLQQRYDTFRQA 508 Query: 342 IIFRKYRHFNHI----------INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 + + + + L + + R+ + +Q E + +Q++ + Sbjct: 509 EADVCPVCGSELGPEHREEVERHYEEQLEELARGLDEGRRRLAALEQEREALRQQYIARL 568 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS------CHTSVSIT 445 K+ + A + R + + ++ + R L +++ + Sbjct: 569 SEAKRLEKAPEELARARAQLEELQRRNARREALARQLSALQTQLEQRAFAQEQRRRLEEL 628 Query: 446 TRILQS 451 R L++ Sbjct: 629 HRKLEA 634 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 55/142 (38%), Gaps = 10/142 (7%) Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 L R RL RL EL+ LE ++ R+ ++ R+ Q+ Sbjct: 273 RLQEERERLVRLEAELQD-LEQLLARREEIEQAHARERTLQEERRQLEAKREQYWGIQKQ 331 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK---KLITRIEFILSHK-- 434 ++Q+ + R ++K+A++ +E + ++ L T ++ ++ R++ + Sbjct: 332 LDQVQSELERQRSE-LEKKLALVRKEQEHVQRQLQELTTRLQERPRIAQRLKAAEQARQE 390 Query: 435 ---IKSCHTSVSITTRILQSFA 453 ++ S ++ + Sbjct: 391 MARLEQQRQQRSALEEEIRHVS 412 >gi|304392185|ref|ZP_07374127.1| serine protease [Ahrensia sp. R2A130] gi|303296414|gb|EFL90772.1| serine protease [Ahrensia sp. R2A130] Length = 502 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 21/67 (31%), Gaps = 5/67 (7%) Query: 454 YKNT--LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTK 510 + L G+ D IT +A I I+F DG A VI P + Sbjct: 107 PRKVSSLGSGFVI--DPAGIIITNNHVIADADEIEIDFTDGTSLKAEVIGTDPKTDIAVL 164 Query: 511 KCQLHNN 517 + Sbjct: 165 RVTPEKP 171 >gi|66044959|ref|YP_234800.1| exonuclease SbcC [Pseudomonas syringae pv. syringae B728a] gi|63255666|gb|AAY36762.1| exonuclease SbcC [Pseudomonas syringae pv. syringae B728a] Length = 1214 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 25/227 (11%), Positives = 59/227 (25%), Gaps = 24/227 (10%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D L A + E Q + + + + L L + Sbjct: 213 DALKTLTAQASNIIPLAPELLAELEQRLSDAQQQLKAHQTQQRQLEIKQQWLTELHRLRD 272 Query: 317 ----SDQTLSCSRYRLDRLPRELEHNLEI-----IIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + L+ ++ D + ++ R R I Q Sbjct: 273 EQLAAQEALNSAQQAWDEHSGARQTLGQLERLGPQRHRFARRVTLNAQLDPLAEQIRQHQ 332 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLIT 425 + + + ++QQ +E Q + ++ + +L + +N + +L + K Sbjct: 333 RQQTSLHDQQQQLESRRTQAQTSLLEAQQAHSSAKPLLLQAFEAQNTLNHLAQELAKASD 392 Query: 426 RIEFILSHKIKSC-------------HTSVSITTRILQSFAYKNTLK 459 + I+ + LQ + L Sbjct: 393 LHQQSEQLCIQGKTSLQTLLDQQQQVAQRLERIAGQLQHSSELAPLA 439 >gi|317047571|ref|YP_004115219.1| chromosome segregation and condensation protein MukB domain-containing protein [Pantoea sp. At-9b] gi|316949188|gb|ADU68663.1| chromosome segregation and condensation protein MukB domain protein [Pantoea sp. At-9b] Length = 1488 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 48/165 (29%), Gaps = 6/165 (3%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + L+ A DQ L+ + R+ + + Sbjct: 442 EWQETFQAREEEATEQLLRLEQKLSVAEAAHSQFDQALALVTSIAGEVNRQDAWQVGREL 501 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 R + H ++ S L N + R + + + ++ L Sbjct: 502 LRDAANQRHHAEQLSSLRLRLNELEQRLREQNEAERLLA-----EFCKRQGQQYDADALE 556 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 L+ + + +I L + + R ++ +++ +++ T Sbjct: 557 GLQRELEAQIEQLSSSVADAGER-RMLMRQELEQLRERITMLTAR 600 >gi|254671447|emb|CBA08972.1| putative chromosome partition protein [Neisseria meningitidis alpha153] Length = 1161 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|229526265|ref|ZP_04415669.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae bv. albensis VL426] gi|229336423|gb|EEO01441.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae bv. albensis VL426] Length = 570 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 32/122 (26%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L I ++Q KQQ + Q + + Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRILHSKQRHFRKQQRL-QAEELPEKE 196 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256 Query: 448 IL 449 L Sbjct: 257 KL 258 >gi|74195257|dbj|BAE28356.1| unnamed protein product [Mus musculus] Length = 965 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 15/206 (7%), Positives = 54/206 (26%), Gaps = 9/206 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + ++ ++ + Sbjct: 696 DFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAALWEMEEHQLQERHQ 755 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ + Sbjct: 756 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 815 Query: 372 HILEKQ----QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + + +Q + ++E+ +Q + + + + + + Sbjct: 816 RMAMYKSLHINGAGSASEQREKIKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESNM 875 Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453 + + + CH V T+ L++ Sbjct: 876 SELQQLQNEKCHLLVEHETQKLKALD 901 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 18/183 (9%), Positives = 53/183 (28%), Gaps = 7/183 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D A + + L+ + + K +K Q Sbjct: 629 DHSVRRKEEAKRIRLEQDRDYAKFQEQLKQMKKEVKSEVEKLPRQQRKESMK------QK 682 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + + RL R+ + + R R D + K ++ + +++ + Sbjct: 683 MEEHSQKKQRLDRDFVAKQKEDLELAMRKLTTENRREICDKERDCLSKKQELLRDREAAL 742 Query: 381 EQIVKQHLRYIFLEKKEKIA-ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 ++ + L+ K+++ + R + +++ R+ L + + Sbjct: 743 WEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEK 802 Query: 440 TSV 442 + Sbjct: 803 ARL 805 >gi|27380346|ref|NP_771875.1| serine protease [Bradyrhizobium japonicum USDA 110] gi|2623992|emb|CAA73938.1| degP [Bradyrhizobium japonicum] gi|27353510|dbj|BAC50500.1| serine protease [Bradyrhizobium japonicum USDA 110] Length = 371 Score = 39.0 bits (89), Expect = 2.3, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 11/89 (12%) Query: 435 IKSCHTSVSITTRILQSFAY--KNTLKRGYTSIQDTNNNFITQKRNLA-------TKTRI 485 + + + + S + + L++G ++ + I L +R+ Sbjct: 282 LAAKESYQGALIAEIASGSPAEQAGLQKG-DIVKAVDGTPIRSASQLRNLIGLTPVGSRV 340 Query: 486 LINF-FDGQANAIVINKAPPKEQPTKKCQ 513 + F +G A + + P K P ++ Sbjct: 341 ELRFERNGAARSASVEVGPAKAVPVRRTA 369 >gi|322516623|ref|ZP_08069537.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus vestibularis ATCC 49124] gi|322124893|gb|EFX96317.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus vestibularis ATCC 49124] Length = 744 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Query: 14 EYSVSELS-YHLKHI-------VESNLSHVCVRG-EISGYRGIHSSG-HAYFSLKDNHSR 63 E +SELS +K + +++ + ++ R + +G H F +K Sbjct: 461 ELQLSELSLDTIKSLEKLAPFGMDNKKPVFWLHDITVTQARTMGQNGAHLKFKVKQGKDS 520 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 D + + EF +G+E V + + G + Q+++E G Sbjct: 521 FDVVAFNKGNLLQEFQQAQGLELAVTLSVNVWNGQTTLQLMLEDARVDGV 570 >gi|312862866|ref|ZP_07723106.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus vestibularis F0396] gi|311101726|gb|EFQ59929.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus vestibularis F0396] Length = 744 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Query: 14 EYSVSELS-YHLKHI-------VESNLSHVCVRG-EISGYRGIHSSG-HAYFSLKDNHSR 63 E +SELS +K + +++ + ++ R + +G H F +K Sbjct: 461 ELQLSELSLDTIKSLEKLAPFGMDNKKPVFWLHDITVTQARTMGQNGAHLKFKVKQGKDS 520 Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 D + + EF +G+E V + + G + Q+++E G Sbjct: 521 FDVVAFNKGNLLQEFQQAQGLELAVTLSVNVWNGQTTLQLMLEDARVDGV 570 >gi|198423307|ref|XP_002120215.1| PREDICTED: similar to viral A-type inclusion protein, putative [Ciona intestinalis] Length = 3720 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 17/185 (9%), Positives = 51/185 (27%), Gaps = 5/185 (2%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 A+ + + ++ T+ L L + + + R Sbjct: 3161 NNELRHALDHEAMVARQTQEELESERKTTAEAREHDRATVADLQSILEEAKKETVRVQRR 3220 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 ++ E E L+ + + + + + + + +Q + Q ++ + Sbjct: 3221 VEDAEEEKEVALQRAREEQISISRRLEH--ERKSMEEALMREQQARKDLQFALDTEKHRK 3278 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 ++ + LR Q + R+ +++S + + Sbjct: 3279 HEAQQRIRELEDQRRESLRRQEEERLMPRSPRESNES---LLAQRRQLESLRQRLQLEAT 3335 Query: 448 ILQSF 452 LQ Sbjct: 3336 KLQKL 3340 >gi|195035865|ref|XP_001989392.1| GH11701 [Drosophila grimshawi] gi|193905392|gb|EDW04259.1| GH11701 [Drosophila grimshawi] Length = 1857 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 12/142 (8%), Positives = 44/142 (30%), Gaps = 5/142 (3%) Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 + + L ++ D+ E EH ++ ++ + + ++ Sbjct: 1123 QQTKARLELELQETQLSRDKHKSEAEHKQMLLAEQEQLSIQQELALGDAGRQREQLEARC 1182 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 Q +L++ + ++Q + E + + L E + + + Sbjct: 1183 QALLQQNETLQQQLTHLHSSSTDSSAELLKLSQQLLEH-----QQANEQLATKSSEERAA 1237 Query: 431 LSHKIKSCHTSVSITTRILQSF 452 L ++++ + ++ Sbjct: 1238 LERQLQASQQRLDTLCAQVELL 1259 >gi|145591215|ref|YP_001153217.1| SMC domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282983|gb|ABP50565.1| SMC domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 702 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 19/176 (10%), Positives = 51/176 (28%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + I+ + L L + L + L +RLP Sbjct: 169 DVYNELRARRERIGGRAEELEKRIQPLRSRLEDLRRRLGEVEAKLRELEPYQNRLPEAER 228 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 LE+ + + L H + + + + ++ +E+I K L Sbjct: 229 RYLELRDRHNVLLAEREQLERRLEELAHAALEAEKDVEQLEEELEKIRKAAQELKTLPTF 288 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + Q + + + +K +++ ++ L+ Sbjct: 289 GDVEKEYFELRQVVSVVEKIPLEVKSYDPSRLEEARQRLEDSSRRLAQVKSRLELL 344 >gi|147920209|ref|YP_686024.1| hypothetical protein RCIX1429 [uncultured methanogenic archaeon RC-I] gi|110621420|emb|CAJ36698.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 421 Score = 38.6 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 2/58 (3%) Query: 37 VRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKI 92 ++G+++ GH +F + D + ++ +I G E V G + Sbjct: 268 LKGKVTQAPHTIEGGHVFFEIGDKTGVLKCSAFEPTKNFREIVRKLVPGDEVKVYGSV 325 >gi|47124946|gb|AAH70834.1| LOC431827 protein [Xenopus laevis] Length = 791 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 17/180 (9%), Positives = 50/180 (27%), Gaps = 13/180 (7%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY-----RLDR 330 +EH + K+ + + ++ R ++D Sbjct: 607 MEQEHALRRRDEAKRIKTEQERDHGKFLEQLKLKKKELKTHVEKLPRQQRRETMKVQMDD 666 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 ++ + + R+ H + I + K R+ + +KQQ + Sbjct: 667 FAQKKHIEEQHFLSRQKEHLTLALRVIVLENRKEIYNKEREFLNKKQQLLRDREGVVWDL 726 Query: 391 IFLEKKEKIAI--------LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 +E+ + + R + + +++ R+ L + + + Sbjct: 727 EERHLQERHQLVKQQLKDQYFLQRHELLRKHEKEQEQMQRYNQRMMEQLKLRQQQEKARL 786 >gi|325202666|gb|ADY98120.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240149] Length = 1161 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|291570151|dbj|BAI92423.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 688 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 70/244 (28%), Gaps = 32/244 (13%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 D A + S+ ++ R + I ++++ L + Sbjct: 350 CDRLKSWLNKAGMADIEETAIRMSTQVDDVDRQLGEFWQEIDQHQISISTNRAELSKIET 409 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 L + +L P E L+ + + + S N Q I Q Sbjct: 410 RLDDIKQKLRHFPDEDIQQLQKRLDEIESRIGELNREMGS---------NYQQIETLTQE 460 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 E++ KQ R E K+ A ++ + +++ R++ +++ Sbjct: 461 CEKLSKQIDRQQMNEIKQLTA------QRRIAATEDAIARLSQVLERLDQQFRQQLEK-- 512 Query: 440 TSVSITTRILQ------SFAYKNTLKRGYTSIQDTNNN--FITQKRNLATKTRILINFFD 491 V + + K LK ++ T+ + + ++F Sbjct: 513 -RVQNIFSQISFTPYQPQLSPKYELK----LVERTSGEDAPVASSTG--ENQILSLSFIG 565 Query: 492 GQAN 495 G Sbjct: 566 GIIE 569 >gi|282165733|ref|NP_940885.2| RUN and FYVE domain-containing protein 4 [Homo sapiens] gi|215273875|sp|Q6ZNE9|RUFY4_HUMAN RecName: Full=RUN and FYVE domain-containing protein 4 Length = 571 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 44/141 (31%), Gaps = 7/141 (4%) Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 L + D + E+ + + + + + L ++K + ++Q Sbjct: 375 WVLQGHATKEDSTVENPQVQTEVTLVARREEQAEVSLQDEIKSLRLGLRKAEEQAQRQEQ 434 Query: 379 HIE------QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + Q +++ L E+ E A L +++ + R + + + Sbjct: 435 LLREQEGELQALREQLSRCQEERAELQAQLEQKQQEAERRDAMYQEELGGQRD-LVQAMK 493 Query: 433 HKIKSCHTSVSITTRILQSFA 453 ++ + LQ + Sbjct: 494 RRVLELIQEKDRLWQRLQHLS 514 >gi|195037208|ref|XP_001990056.1| GH18447 [Drosophila grimshawi] gi|193894252|gb|EDV93118.1| GH18447 [Drosophila grimshawi] Length = 1982 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 18/173 (10%), Positives = 50/173 (28%), Gaps = 6/173 (3%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS---- 322 A + S +A + + + + ++ NS Q L Sbjct: 1415 TQTAVSCLQLHWRNYLLSKSQRQAYVELRLAAINVQRRYRAQLEMRRQRNSYQQLKLATI 1474 Query: 323 --CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 RYR R+ + + ++ Q+ RQ + Q+ Sbjct: 1475 QVQRRYRAQLAMRKQRQEYQNQRALIVQIQQRYRAKLAMKTARQVYQRQRQAAISIQRRW 1534 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 +++ L+ ++ +I+ + + ++ + ++ + H Sbjct: 1535 RALLQMRLQRQNYQRMRNSSIILQRKWRATLEAQRQRQIFRQTVAKVRLLQRH 1587 >gi|146418271|ref|XP_001485101.1| hypothetical protein PGUG_02830 [Meyerozyma guilliermondii ATCC 6260] Length = 1432 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 14/187 (7%), Positives = 49/187 (26%), Gaps = 3/187 (1%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 ++ H+ ++L+ + + + + + + L R Sbjct: 821 PQVLGQNPQLQNHIHLQTLSLQMQHQHASQLQKQNAVAVQGRNDVQVQTQNPQLQNQNVR 880 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L L +L+ ++ + + D +Q + + ++ + Q Sbjct: 881 LQNLSPQLQTQSPQMLHQNASQLQNQNFTPVQDRNDVQVQTQNPQLQNQNVRLQNLSPQL 940 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 + + L I+ + ++++ + Sbjct: 941 QTQSPQMLHQNASQLQNQNFTPVQDRNVAQVQIQNSQ---LQSQNVRLQNQGPQLQSQNM 997 Query: 448 ILQSFAY 454 LQ+ + Sbjct: 998 RLQNQSP 1004 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 18/199 (9%), Positives = 57/199 (28%), Gaps = 7/199 (3%) Query: 263 RAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLS 322 + P ++ LQ+ + + ++ N+ ++ + L+ Sbjct: 697 QNPHLPVHNQVVQTRSPQLQNQKTTHGQSQSPQLPVQTSPQLQNQNTQVRNQNHHSPVLN 756 Query: 323 CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 L+ + H + + +HN Q Q+ Q+ Q Sbjct: 757 PQVQTQSPQFPAQNPRLQNQSPQLPVH-DQRVQTQGPQLPVHNQQVQTQNSQLPVQNATQ 815 Query: 383 IVKQHLR------YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 + Q+ + + + L M + ++ + +++ Sbjct: 816 VQTQNPQVLGQNPQLQNHIHLQTLSLQMQHQHASQLQKQNAVAVQGRNDVQVQTQNPQLQ 875 Query: 437 SCHTSVSITTRILQSFAYK 455 + + + + LQ+ + + Sbjct: 876 NQNVRLQNLSPQLQTQSPQ 894 >gi|328554543|gb|AEB25035.1| DNA polymerase III DnaE [Bacillus amyloliquefaciens TA208] gi|328912947|gb|AEB64543.1| DNA polymerase III (alpha subunit) [Bacillus amyloliquefaciens LL3] Length = 1112 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 52 HA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 H + +L D ++A+++ ++ L +EG GK+ K Q I+ S Sbjct: 972 HMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFASGKME--ERQEKIQFIMSS 1026 >gi|325958692|ref|YP_004290158.1| phosphoesterase RecJ domain-containing protein [Methanobacterium sp. AL-21] gi|325330124|gb|ADZ09186.1| phosphoesterase RecJ domain protein [Methanobacterium sp. AL-21] Length = 724 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 13/133 (9%) Query: 28 VESNL--SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85 ++ V + GE+ +SG F++ D S A + ++ G Sbjct: 206 IDKRFMGKTVRIVGEVVQI--QQTSGPTIFTITDETSTTWAAAFDEPGVRVYPHINTGDI 263 Query: 86 FLVIGKITTFPGSSKYQI---IIESLIPSGSGTLLTALEKRKKKLLE----EGLFSDQHK 138 V+G++ K QI I+SL S + +++ + E E L + Sbjct: 264 VEVLGEVNLHG--GKIQIESESIDSLKEEDSVEMRKLIDEAIDERAEPEETEFLIESETL 321 Query: 139 NPIPFIPKIIAVI 151 N + + A Sbjct: 322 NKLRPMMHNAAKA 334 >gi|308174617|ref|YP_003921322.1| DNA polymerase III subunit alpha [Bacillus amyloliquefaciens DSM 7] gi|307607481|emb|CBI43852.1| DNA polymerase III (alpha subunit) [Bacillus amyloliquefaciens DSM 7] Length = 1115 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 52 HA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 H + +L D ++A+++ ++ L +EG GK+ K Q I+ S Sbjct: 975 HMAFLTLSDETGEMEAVVFPDQYRRLSPLLKEGALLFASGKME--ERQEKIQFIMSS 1029 >gi|238764768|ref|ZP_04625711.1| hypothetical protein ykris0001_7360 [Yersinia kristensenii ATCC 33638] gi|238697059|gb|EEP89833.1| hypothetical protein ykris0001_7360 [Yersinia kristensenii ATCC 33638] Length = 455 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 20/201 (9%), Positives = 54/201 (26%), Gaps = 4/201 (1%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA- 313 + +AD P E R++ I L + + Sbjct: 92 ITAESADKTLPATGREPEFYSREVTAWVKGSDGQNYRISYDIDGLREVNQQGRADEGRHE 151 Query: 314 -LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + L NL + + F + S L+ +++ Sbjct: 152 ILNIPIPMIWMGVLGGLFFSTFLAWNLTRPMRQLRAGFERVAQGDLSVRLLPVMRRRHDE 211 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + E + + + ++ + +++ + + R+ ++ +E L Sbjct: 212 LTEVARDFDSMAERLKELVSA-REQLLHDVSHELRSPLARLQLAIGLARQNPKNVENSLQ 270 Query: 433 HKIKSCHTSVSITTRILQSFA 453 I+ + L + + Sbjct: 271 R-IEHESERLDKMIGELLALS 290 >gi|189046678|sp|B0KWR6|SFI1_CALJA RecName: Full=Protein SFI1 homolog gi|167045790|gb|ABZ10459.1| spindle assembly associated Sfi1 homolog isoform a (predicted) [Callithrix jacchus] Length = 1235 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 15/175 (8%), Positives = 46/175 (26%), Gaps = 12/175 (6%) Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 L +++ + + L R R + Sbjct: 714 LVQWREIASVQIYYRQQEDHAIWEARKVLARGCLRTWFQRWRDCSRRSAQQRLQLERAAQ 773 Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQ------QHIEQIVKQHLRYIFLEKKEKIAI 401 H ++ + + H++ R+ +L +Q Q + Q R ++++ Sbjct: 774 HHHRQLLLEGLARWKTHHLGCVRKRLLHRQSTQLLAQRLSQTCFHQWRQQLAARRQEQQA 833 Query: 402 LHMLRE----QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450 + +++ R + + ++ + R+L+ Sbjct: 834 SVRALWFWAFSLQAKVWATWLAFVLERRRKKARMQQAFQAYQGQLLQEGAMRLLR 888 >gi|154499865|ref|ZP_02037903.1| hypothetical protein BACCAP_03522 [Bacteroides capillosus ATCC 29799] gi|150271463|gb|EDM98720.1| hypothetical protein BACCAP_03522 [Bacteroides capillosus ATCC 29799] Length = 1161 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 33 SHVCVRGEISGYRG---IHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVI 89 V + G IS + ++S AY +L+D+ ++ +++ L + +E + L Sbjct: 993 QKVNIAGVISSAKTKTTRNNSLMAYVTLEDDTGSMELLVFSRVLGESGSYIKENMPVLAT 1052 Query: 90 GKITTFPGSSKYQIIIESLIP 110 G+I+ + Q++++S+ P Sbjct: 1053 GRISVRDEKAP-QLMVDSVRP 1072 >gi|29124562|gb|AAH48950.1| Sfi1 protein [Mus musculus] Length = 545 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 14/189 (7%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 T +++ V +E + + + L + + Q + R++ Sbjct: 20 TLCSKVLVQWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQ 79 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L + + L ++ R H + I+ FL RQ Q + + Sbjct: 80 LGQAAQHHRWQL--LMEAMARWKAHHLGCIRKKFL------QRQAAQLLAQRLSRACFCQ 131 Query: 388 LRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV- 442 R +K++ L + + +++ R + L +++ + Sbjct: 132 WRKQLAVRKQEQWGTARALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLL 191 Query: 443 -SITTRILQ 450 TR+L+ Sbjct: 192 QEGATRLLR 200 >gi|312958522|ref|ZP_07773042.1| transcriptional regulator [Pseudomonas fluorescens WH6] gi|311287065|gb|EFQ65626.1| transcriptional regulator [Pseudomonas fluorescens WH6] Length = 206 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 16/116 (13%), Positives = 36/116 (31%), Gaps = 7/116 (6%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 F + + + H+ H R++F + L L + Sbjct: 54 FERFQHELTPLLDPPADAQLEPQDYWLFLHLIIERMAHYRFLFQDLSNLAGRLPKLAKGI 113 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI-----LQSFAYKNTLKR 460 ++ + L + L+ R++ ++ S ++ L S Y+ L R Sbjct: 114 RHLLTALKRTLASLLARLKAA--GQLTSGTQALGQLVEQITLTLLFSLDYQRILDR 167 >gi|296204149|ref|XP_002749209.1| PREDICTED: A-kinase anchor protein 13, partial [Callithrix jacchus] Length = 2656 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 17/205 (8%), Positives = 56/205 (27%), Gaps = 17/205 (8%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2315 DSHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNGNLVFMLKRNSEQVVQSIVHLHEL 2374 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ R + + +++K RQ + Q+ Sbjct: 2375 LSTLQGVVLQQDSYIEDQKLVLSERALTRSLSRPSSLVEQEKQRSLEKQRQDLANLQKQQ 2434 Query: 381 EQ----------------IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 Q + + +++EK+ E+ + + + + Sbjct: 2435 AQYLEEKRRREREWEARERELREREALLAQREEKVQQGQQDLEKEREELQQKKGTYQYDL 2494 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ +++ + L Sbjct: 2495 ERL-RAAQKQLEREQEQLHREAERL 2518 >gi|227111944|ref|ZP_03825600.1| cell division protein MukB [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 1479 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 15/177 (8%), Positives = 46/177 (25%), Gaps = 5/177 (2%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + L +L A + + + K +L L + + ++ + + Sbjct: 424 ERARSLCQLPDLTADNADEWLDSYQAKEQEATEILLMLEQKLSVADAAHGQFEQAYQLVS 483 Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + + + +Q R + E +Q + + Sbjct: 484 KIAGAVNRNEAWQVARDLLRDSSSQRYQAERVQPLRMRLSELEQRLREQQDAERLLQDFN 543 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRI 448 K+ E + + + L+ L +++ + T Sbjct: 544 KRNGQDYQPEELESLQQELDARIETLSSLVAEAGERRMALRQELEQTQQRIQKLTAR 600 >gi|327543395|gb|EGF29820.1| membrane-bound dehydrogenase domain protein [Rhodopirellula baltica WH47] Length = 1146 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 3/50 (6%) Query: 449 LQSF-AYKNTLKRGYT--SIQDTNNNFITQKRNLATKTRILINFFDGQAN 495 L+S LK GY+ I + I+ T I + +G Sbjct: 888 LESLLDPSARLKEGYSTRKILTEDGEVISGISIGETDDAIRLRLANGTVR 937 >gi|325207588|gb|ADZ03040.1| chromosome segregation protein SMC [Neisseria meningitidis NZ-05/33] Length = 1161 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|262037471|ref|ZP_06010931.1| ATP-dependent DNA helicase RecG [Leptotrichia goodfellowii F0264] gi|261748506|gb|EEY35885.1| ATP-dependent DNA helicase RecG [Leptotrichia goodfellowii F0264] Length = 691 Score = 38.6 bits (88), Expect = 2.4, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 13/109 (11%) Query: 21 SYHLKHIVESNLSHVCVRGEISG-YRGIHSSGHAYFS--LKDNHSRIDAIIWKGTLNKIE 77 S ++ I+ V ++G + SG F L+D I+ + + I+ Sbjct: 52 SKNISEILPEEF--VAIKGTVVNAVNQYIKSGRTMFRAMLRDETGIIELVWF--NNRFIK 107 Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQII---IESLIPSGSGTLLTALEKR 123 + G E V GK+ ++K+Q++ + + G E+ Sbjct: 108 NSIKIGDELQVYGKV---KRAAKFQMVNPEYKKIQSDGMIRGEARHEQI 153 >gi|257388242|ref|YP_003178015.1| nucleic acid binding OB-fold tRNA/helicase-type [Halomicrobium mukohataei DSM 12286] gi|257170549|gb|ACV48308.1| nucleic acid binding OB-fold tRNA/helicase-type [Halomicrobium mukohataei DSM 12286] Length = 731 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 4/71 (5%) Query: 33 SHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI 92 V + GEI +SG F L+D +D + + E + G + Sbjct: 246 DDVRLEGEIVDV--RQTSGPTVFELRDETGTVDCAAFVEAGVRAYPDIVEEDIVRLDGDV 303 Query: 93 TTFPGSSKYQI 103 + Q+ Sbjct: 304 R--RRRGEIQV 312 >gi|289580301|ref|YP_003478767.1| phosphoesterase RecJ domain protein [Natrialba magadii ATCC 43099] gi|289529854|gb|ADD04205.1| phosphoesterase RecJ domain protein [Natrialba magadii ATCC 43099] Length = 637 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 10/119 (8%) Query: 28 VESNLS-HVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEF 86 +E + + + GE+ + + G F + D + ++ + E G Sbjct: 118 LEGTVGEQIHLEGEVVQVKQ--TGGPTIFHVTDESGVVPCAAFEEAGVRAYPSVEVGDVV 175 Query: 87 LVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIP 145 V G Q + G L + + LE+ L S + + + Sbjct: 176 RVTGTPE--HREGSVQ-----IEVDGLSKLEGETAEEARDRLEDALESRAEPHDVAPLI 227 >gi|195448250|ref|XP_002071576.1| GK10058 [Drosophila willistoni] gi|194167661|gb|EDW82562.1| GK10058 [Drosophila willistoni] Length = 1035 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 57/172 (33%), Gaps = 8/172 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + V + N E + + K +L N Q + R+ + Sbjct: 653 GDRKVYDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 712 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 ++ RK +++ + L + K +Q + + + +K H + Sbjct: 713 AQKQYIELEMRKFKRKRMI---LLHELDDQLLRDELSKKQQQLEQAHGML---LKHHEKT 766 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440 LE +++ ++ + EQ + + K + R++ L K ++ Sbjct: 767 QELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRLKKDLLRKHALELRQQ 818 >gi|317504798|ref|ZP_07962756.1| DNA helicase RecG [Prevotella salivae DSM 15606] gi|315664073|gb|EFV03782.1| DNA helicase RecG [Prevotella salivae DSM 15606] Length = 700 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 68/227 (29%), Gaps = 37/227 (16%) Query: 12 HPEYSVSELSYHLKHIVESNLSHVCVRG------EISGYRGIHS-SGHAYFSLKDNHSRI 64 Y++ EL+ + V ++G E S H FS D H + Sbjct: 47 SKIYTIDELNGSI--------PFVQIKGKILSFEEFSNGTRRKRIVAH--FS--DGHGVV 94 Query: 65 DAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTL-------- 116 D + ++GT I E++V GK T F YQ + + L Sbjct: 95 DLVWFRGT-QYIYKTYALNTEYIVFGKPTVFGSR--YQFAHPEIEKADELQLNEMGMQPY 151 Query: 117 LTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVII 176 + E+ K + KN I +PK T P I+ L IS + I Sbjct: 152 YSTTERMKTNGITSRTIEKLTKNLISRLPKDAISETLP--VFIQRPLHLISREAAFKGIH 209 Query: 177 FPVKVQGDECPKEIANAILQLN-----TLKEGRTCPRPDIIILARGG 218 +P + + + + + R G Sbjct: 210 YPKSLDELQHAQVRLKFEELFYVQLNILRYASDHRRKYRGYVFQRVG 256 >gi|309792329|ref|ZP_07686799.1| ATP-dependent DNA helicase RecG [Oscillochloris trichoides DG6] gi|308225644|gb|EFO79402.1| ATP-dependent DNA helicase RecG [Oscillochloris trichoides DG6] Length = 855 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 2/42 (4%) Query: 56 SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPG 97 +L D I A+ + + + G + ++ GK++ + G Sbjct: 208 TLGDETGIIKAVFF--NQRWLMWDLSVGDQIVLSGKVSVYGG 247 >gi|307177319|gb|EFN66492.1| Serologically defined colon cancer antigen 8-like protein [Camponotus floridanus] Length = 841 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 23/190 (12%), Positives = 53/190 (27%), Gaps = 9/190 (4%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 A KE + I + L L + L + +R Sbjct: 359 AARDKETEATQKAKRSMDDRQQIEFERSQSEMEIRRLKDELERQHEKLREAAQEANRRIT 418 Query: 334 ELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 E +E ++ F + ++ +K R+ I E ++ + Q Sbjct: 419 EERQQIERRYNQQIEQFTADIASHWETANKSQLESEKQRREINELKRELSQKQATIDNLK 478 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + + L + + + +T + + + + + Sbjct: 479 KELQNKISILQSDLNQALSEKDAAEQELLTSKLTTERN--ERQARQEQSRLQA-----EI 531 Query: 452 FAYKNTLKRG 461 +YK L+RG Sbjct: 532 NSYKQRLERG 541 >gi|229591995|ref|YP_002874114.1| putative chromosome partition protein [Pseudomonas fluorescens SBW25] gi|229363861|emb|CAY51329.1| putative chromosome partition protein [Pseudomonas fluorescens SBW25] Length = 1162 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 41/146 (28%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + +++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKGEERQLKAQLSALRWQALNDQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 I Q+ L +Q + LR + E+ ++ I + Sbjct: 245 GQRESIIGTQEISFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLKEAERARLE 330 >gi|170059597|ref|XP_001865432.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167878321|gb|EDS41704.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 409 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 23/250 (9%), Positives = 65/250 (26%), Gaps = 12/250 (4%) Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL------PRELEHN 338 L + L D L RL Sbjct: 62 PQTLTQYNAASANEAGHAWCGRRRTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKT 121 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + + +R+K+ Q +R + + + + + + Sbjct: 122 QDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSRLKTQDSR 181 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY-KNT 457 + + +R+ + +K +R++ ++K+ + + L++ T Sbjct: 182 LKTQDSRLKTQDSRLKTQDSRLKTQDSRLKT-QDSRLKTKDSRLKTQDSRLKTQDPRLKT 240 Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNN 517 + ++ ++ TQ L T+ + D + + + Sbjct: 241 QD---SRLKTQDSRLKTQDSRLKTQDS-RLKTQDSRLKTRDSRLETRDSRLETRDSRLKT 296 Query: 518 KREKQGTQGE 527 + + TQ Sbjct: 297 QDSRLKTQDS 306 >gi|148675163|gb|EDL07110.1| mCG15699, isoform CRA_d [Mus musculus] Length = 2761 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 17/205 (8%), Positives = 59/205 (28%), Gaps = 17/205 (8%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2421 DCHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNGNLVFMLKRNSEQVVQSIVHLHEL 2480 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ + + + +++K RQ + Q+ Sbjct: 2481 LSMLQGVVLQQDSYIEDQKLVLTEKVLTRSASRPSSLIEQEKQRSLEKQRQDLANLQKQQ 2540 Query: 381 EQIVKQHLRYI---------FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424 Q +++ R +++ K+A + + + +++ Sbjct: 2541 AQHLEEKRRREREWEAREQELRDREAKLAEREETVRRRQQDLERDREELQQKKGTYQCDL 2600 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ +++ + T L Sbjct: 2601 ERL-RAAQKQLEREQEQLRRDTERL 2624 >gi|50949385|emb|CAH10698.1| hypothetical protein [Homo sapiens] Length = 408 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 175 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 234 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 235 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 294 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 295 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 343 >gi|281338777|gb|EFB14361.1| hypothetical protein PANDA_009980 [Ailuropoda melanoleuca] Length = 664 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 23/238 (9%), Positives = 71/238 (29%), Gaps = 13/238 (5%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285 ++ +I ++ + II + G E D ++ D R +P + E + + Q Sbjct: 212 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTSLETSWEEQLLEQQEH 271 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + E +I ++ + + ++L ++ + + Sbjct: 272 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 326 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + + + QQ + Q L+ + + + Sbjct: 327 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 384 Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + + ++ + + + + ++ + R L +Y+ L+R Sbjct: 385 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQAKLEEALRKLSEASYQQVDLER 441 >gi|116051087|ref|YP_790082.1| hypothetical protein PA14_24180 [Pseudomonas aeruginosa UCBPP-PA14] gi|115586308|gb|ABJ12323.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 479 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 21/220 (9%), Positives = 55/220 (25%), Gaps = 19/220 (8%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + A +MA + + A + + + + Sbjct: 159 LVDEEPAAVEPQRLQMAAEEQWYAAGPAAPKAAPAEPPRKQEDEQAARLAQLVKQQRQQL 218 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 RL L R+ E L + + + + L +++ + E Q Sbjct: 219 AALARQHEQRLAGLARQHEEELARREQDARGQLDILRSEVL--SLQQALERQARENAELQ 276 Query: 378 QHIEQIVKQHLRYIFLEKKE---------------KIAILHMLREQTKNRIFYLHTHIKK 422 Q + + +Q R ++ + L + + + Sbjct: 277 QRLLEQGEQFQRNREELTRQLRFIENQGRNETDLLRSEFADELEARVAVAVAGYKEQVSI 336 Query: 423 LITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + L +++ + L + + L+R Sbjct: 337 RDVELAYRNELDQQLEQELAELRAERDRLAAQGPEQLLER 376 >gi|313890133|ref|ZP_07823768.1| DNA polymerase III, alpha subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313121494|gb|EFR44598.1| DNA polymerase III, alpha subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 1036 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Query: 24 LKHIVESNLSHVCVRGEISGYRGIHSSG--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPE 81 + +++ + + V+ E SSG A+ ++ D +ID ++ + +L Sbjct: 880 ITKLLKDSEHTILVQIEKVRIIRTKSSGQQMAFLTVTDTKKKIDVTVFPQEFLQFNYLLT 939 Query: 82 EGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 EG + G++ ++ QI+ +++ + Sbjct: 940 EGQMVFIQGRVK--ERDNRLQIVAQTITVA 967 >gi|325109305|ref|YP_004270373.1| metal dependent phosphohydrolase [Planctomyces brasiliensis DSM 5305] gi|324969573|gb|ADY60351.1| metal dependent phosphohydrolase [Planctomyces brasiliensis DSM 5305] Length = 323 Score = 38.6 bits (88), Expect = 2.5, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 31/89 (34%), Gaps = 5/89 (5%) Query: 49 SSGHAYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106 +G Y L+D + ++W + + + G V GK+ + + QII+ Sbjct: 30 RNGDTYLLADLRDKTGSLHGLLWNISEDSVA-HINAGDYVKVKGKVQLY--NGNLQIILT 86 Query: 107 SLIPSGSGTLLTALEKRKKKLLEEGLFSD 135 + + + E +FS Sbjct: 87 RIDAVNETQIDLNDFQAGSSQDVEKMFSR 115 >gi|189181672|ref|NP_083608.1| A kinase (PRKA) anchor protein 13 [Mus musculus] Length = 2776 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 17/205 (8%), Positives = 59/205 (28%), Gaps = 17/205 (8%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E + L+ +++++ + + Sbjct: 2436 DCHQMNASKGGEKEEGDDGQDLRRTESDSGLKKGGNGNLVFMLKRNSEQVVQSIVHLHEL 2495 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS + + + +E ++ + + + +++K RQ + Q+ Sbjct: 2496 LSMLQGVVLQQDSYIEDQKLVLTEKVLTRSASRPSSLIEQEKQRSLEKQRQDLANLQKQQ 2555 Query: 381 EQIVKQHLRYI---------FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI------- 424 Q +++ R +++ K+A + + + +++ Sbjct: 2556 AQHLEEKRRREREWEAREQELRDREAKLAEREETVRRRQQDLERDREELQQKKGTYQCDL 2615 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ +++ + T L Sbjct: 2616 ERL-RAAQKQLEREQEQLRRDTERL 2639 >gi|170079221|ref|YP_001735859.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. PCC 7002] gi|169886890|gb|ACB00604.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. PCC 7002] Length = 1007 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 12/208 (5%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 L V K Q S E ++ + N L AL Sbjct: 498 TCPLCEQNLDHDHHQNVMAKTQAQYSATEAEILTFQNELKRCDQLLRDYNQELTALDQVR 557 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 ++ RL + +E N + + + ++N ++ L + R + E Q Sbjct: 558 SRYESYDQQMIRLEQAIETN-QALEKELKQVEQELLNLERALRLEAYAEDLRAELAEVQH 616 Query: 379 HIEQIVKQHLRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 +E + + + EK + + Q + R+ L + + +E H+ Sbjct: 617 QLETLKYDESQLAIARETEKEYRWAELKEVELNQARQRLDTLQRELPQQEAALET-QRHQ 675 Query: 435 IKSCHT------SVSITTRILQSFAYKN 456 + ++ L + Y Sbjct: 676 LDQNRQTSPWQVHLTQLQEQLNALNYDR 703 >gi|332263926|ref|XP_003281001.1| PREDICTED: 5-azacytidine-induced protein 1, partial [Nomascus leucogenys] Length = 895 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 9/170 (5%), Positives = 44/170 (25%), Gaps = 8/170 (4%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + + + + + + + L +++ + L ++ + Sbjct: 623 RHKQEVRRLKSLHEAELLQSDERASQRCLRQAEELREQLEREKEALGQQERERARQRFQQ 682 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + L Q+ + E+++ + Q + + +++ L Sbjct: 683 HLEQ--------EQWALQQQRQRLYSEVAEERERLGQQAARQRAELEELRQQLEESSSAL 734 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 K ++ L +++ + + + + Sbjct: 735 TRTLKAEFEKGREEQERRHQMELKALKQQLELERQAWEAGCARKERVSPQ 784 >gi|299769612|ref|YP_003731638.1| ABC transporter family protein [Acinetobacter sp. DR1] gi|298699700|gb|ADI90265.1| ABC transporter family protein [Acinetobacter sp. DR1] Length = 528 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 32/336 (9%), Positives = 104/336 (30%), Gaps = 18/336 (5%) Query: 122 KRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKV 181 + + + +F + ++ + G ++Q ++ I+ ++ Sbjct: 10 QLSLEFPSKDMF---QQLNFSLESHQVSALIGRNGQGKSLLMQMLNQTLKSDSILTSGQI 66 Query: 182 QGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI 241 + +L D+ + + + +F+D ++ + I Sbjct: 67 -SWHVKHAYLPQLHRLAAQTIAEALDILDVYHAFKRV--EQGVANFDDYDLLEGKWDLPI 123 Query: 242 PIISAIGHETDWTLADY-AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 + + T D+ +L T A + +K L L+ + + Sbjct: 124 LWNNLLESAGLPTDLDFPVKNLSEGQKTKLALSCLFLKSDHYLLLDEPSNHLDQESRKWL 183 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + L+ +D + EH L + ++ + Sbjct: 184 IDHLRKHPAGALIISHDRSLLNE----VDHIYHLNEHGLHHTTGNYEKFYDQYQTHVA-- 237 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 L ++Q+ ++ + +Q +++ + + K + + Q K + + Sbjct: 238 ALEQSVQQGQRDVKHMKQKQHEVLMKAHKRERAGNKLRESNS-----QAKILLDFKKEQA 292 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + I I+ +I + ++ + L++ + Sbjct: 293 GQSIAAIQSQHQRQISNSQNDLTDKKKRLETVKPQQ 328 >gi|254671825|emb|CBA03959.1| putative chromosome partition protein [Neisseria meningitidis alpha275] Length = 1161 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|254515681|ref|ZP_05127741.1| ggdef family protein [gamma proteobacterium NOR5-3] gi|219675403|gb|EED31769.1| ggdef family protein [gamma proteobacterium NOR5-3] Length = 378 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 59/211 (27%), Gaps = 22/211 (10%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 H L + D + AE+A + L + R+++ Sbjct: 21 HHKLVGLINELGDAISSDSAYTAEIAS-----IIQQLFSYTQYHFTEEERMMRAAKVDER 75 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + L +Y + + + + + L + Sbjct: 76 HQEAHLNRHKEFLEEVQYIHANMATDPNAA--------SHLLEFLTHWLAYHILGSDQNL 127 Query: 369 NRQ-HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 RQ +EK Q + R +A L+ L +Q R L R+ Sbjct: 128 ARQIKAIEKGASPHQAFEDEERRANDATGPLLAALNALFQQVSARNRELM--------RL 179 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 L K+ +++ L A+ +TL Sbjct: 180 NQSLEAKVSERTRALTELNTQLDELAHTDTL 210 >gi|121634340|ref|YP_974585.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18] gi|120866046|emb|CAM09784.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18] gi|325131781|gb|EGC54482.1| chromosome segregation protein SMC [Neisseria meningitidis M6190] gi|325137671|gb|EGC60248.1| chromosome segregation protein SMC [Neisseria meningitidis ES14902] Length = 1161 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATEQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|109108807|ref|XP_001094990.1| PREDICTED: centrosomal protein of 164 kDa isoform 2 [Macaca mulatta] Length = 1457 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 53/149 (35%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + S + Sbjct: 781 AKHQEVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHMAEYEQELSSLL----RE 836 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 837 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 896 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 897 LETVRQEQHKRLEDLRRRHREQERKLQDL 925 >gi|284807020|dbj|BAI67715.1| nuclear matrix constituent protein 1 [Apium graveolens] Length = 1171 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 56/162 (34%), Gaps = 25/162 (15%) Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L ++D L+ + + + E+ + + + L NI + R+ Sbjct: 177 SKLHSADAKLAELSRKSSDIE---RKSHELEARESALRRERLSLNAERESLTDNISRQRE 233 Query: 372 HILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + E ++ +++ ++ +R + +++E+ L +Q + + I+ +I ++ Sbjct: 234 DLREWERKLQEDEERLAEVRRLLNQREERANENDRLYQQKQTELEGEQKKIEIIIASLKN 293 Query: 430 --------------------ILSHKIKSCHTSVSITTRILQS 451 + H ++ ++ L + Sbjct: 294 KEDDISSRIEKLNIKEKEADAMKHSLEIKERDLNELEEKLNA 335 >gi|194666702|ref|XP_001788159.1| PREDICTED: PTPRF interacting protein alpha 2, partial [Bos taurus] Length = 975 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + V +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|195054188|ref|XP_001994008.1| GH17953 [Drosophila grimshawi] gi|193895878|gb|EDV94744.1| GH17953 [Drosophila grimshawi] Length = 4784 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 14/181 (7%), Positives = 49/181 (27%), Gaps = 13/181 (7%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + ++L + + + + + + + S R + Sbjct: 633 LHIDRIMTAKQSMDLNEVESRVWLNYMDQICEQFRGEIPHIKHPKMDFSDLRQKYRINHT 692 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV--------- 384 + ++ K + + + + + + + ++Q+ EQ++ Sbjct: 693 HAPPDFSKLLQTKPKAKSPMQDAVDVPTTVQRRSVLEEERAKRQRRHEQLLNSGGGNLAA 752 Query: 385 ----KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 + A R K R +I++ R++ I +++ Sbjct: 753 NSATAAAASGAASSNNVQQAQSDTPRRSKKRRQADKTANIEERQQRLQEIEENRLDRMSR 812 Query: 441 S 441 Sbjct: 813 R 813 >gi|68537127|ref|YP_251832.1| putative cell surface protein [Corynebacterium jeikeium K411] gi|68264726|emb|CAI38214.1| putative cell surface protein [Corynebacterium jeikeium K411] Length = 2033 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 4/62 (6%) Query: 467 DTNNNFITQK-RNLATKTRILINF--FDG-QANAIVINKAPPKEQPTKKCQLHNNKREKQ 522 D N N + ++ +I + DG + + +V+ P T+K ++ + Sbjct: 1776 DENGNLVVDIDKDAKPGDKITVVVKDKDGNEIDRVVVEVEKPDAPETEKPDWKDDSGKPG 1835 Query: 523 GT 524 Sbjct: 1836 DK 1837 >gi|198451718|ref|XP_001358495.2| GA14453 [Drosophila pseudoobscura pseudoobscura] gi|198131613|gb|EAL27634.2| GA14453 [Drosophila pseudoobscura pseudoobscura] Length = 822 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 10/187 (5%), Positives = 41/187 (21%), Gaps = 4/187 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 P + +P Q ++ + + L + LK+ + Sbjct: 540 HAATKMPPLPTAIPMPTTPRTQHQHSSVNTPKDAAMEELSTFAQLKAYVELKSESKPEHL 599 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L L + ++ + + L + + Q Sbjct: 600 LDQRLEGQQTLSSSHPGAMLLLACVLVVVLLAGLAHVYRCELPWQRRGRAGQMRPHHQRQ 659 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 ++ + + + + + + + + +++ Sbjct: 660 FNESDDAHSFLNYQGSAGSTADPARLQ----KWHHSTRREAPYSSPLHNLQARELQREQN 715 Query: 441 SVSITTR 447 + + Sbjct: 716 RLQRCQQ 722 >gi|239828024|ref|YP_002950648.1| DNA polymerase III subunit alpha [Geobacillus sp. WCH70] gi|239808317|gb|ACS25382.1| DNA polymerase III, alpha subunit [Geobacillus sp. WCH70] Length = 1104 Score = 38.6 bits (88), Expect = 2.6, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 26/136 (19%) Query: 17 VSELSYHLKHIVESNLS---HVCVRGEISGYRGIHSSG--HAYFSLKDNHSRIDAIIWKG 71 V + ++ ++ V + + + +G A+F++ D +D + + Sbjct: 936 VRSVMSVIREK--TDFPVKVGVYI---VEERKTRTKTGKEMAFFTVSDESGEMDVVAFPD 990 Query: 72 TLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE------------SLIPS--GSGTLL 117 + + ++G L+ GK+ K Q++I + P SG L Sbjct: 991 VYRRYSSVLKKGTVRLLEGKVEV--RKGKAQLVIRKADVPAMEALYVKIRPEHIASGKLF 1048 Query: 118 TALEKRKKKLLEEGLF 133 T E KK + +F Sbjct: 1049 TLKELLKKYHGKTPVF 1064 >gi|328783366|ref|XP_392064.4| PREDICTED: hypothetical protein LOC408519 [Apis mellifera] Length = 1602 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 54/185 (29%), Gaps = 11/185 (5%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPR 333 + + + +++ ++ K S D+ R L+R Sbjct: 1128 ENGKVYDDQIFRKQELRELKMLQKMEQKQFQDLSQKAQFNKDQQDKRFEQERQLLERNAE 1187 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 L ++ + + + + ++ ++Q +K + + L Sbjct: 1188 TDLETLARQQRQQIERAEAQQEADLRLASKKIRSEQERELKQFREGLKQELKLLKQEVDL 1247 Query: 394 EKKEKIAILHMLR---------EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 K+K +R E+ K+ + L+ + L+ R+ KI Sbjct: 1248 MPKDKRKSAFKIRKEKLEAEHEEREKHFLDKLNESHELLLRRLSDSHREKIALMERQFLQ 1307 Query: 445 TTRIL 449 + L Sbjct: 1308 QKQQL 1312 >gi|195576698|ref|XP_002078212.1| GD23326 [Drosophila simulans] gi|194190221|gb|EDX03797.1| GD23326 [Drosophila simulans] Length = 2547 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 56/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + L ++ + ++ Sbjct: 1168 HFNIQKLSHAIGNVQSQNSDLSLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 1227 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 1228 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 1286 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + ++ L Sbjct: 1287 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVGQQAKLNDTLRDKEQQ 1346 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 1347 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 1378 >gi|171914180|ref|ZP_02929650.1| Chromosome segregation protein SMC [Verrucomicrobium spinosum DSM 4136] Length = 1328 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 19/175 (10%), Positives = 51/175 (29%), Gaps = 11/175 (6%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 N ++ L + +P + +E R+ Sbjct: 327 NNRDMVDRQQRELAAADEQFSSIRNAIESRQYALEEHQITHNAIIPERQKLEMERRTLRE 386 Query: 347 YRHF---NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI--FLEKKEKIAI 401 K+ L + + +RQ + V+ F + +I Sbjct: 387 TFRRLEGEAATADAKAQSLTNQMATDRQRHEALAHDKQSAVQAREASQVEFDHLQRQIEE 446 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFI------LSHKIKSCHTSVSITTRILQ 450 L +R + ++++ L I++ + + L ++ + + + +IL+ Sbjct: 447 LETVRAELEHKLKELTNTIQEQRRQRDAASEELNNLQRQLTQRRSRLEVLQQILE 501 >gi|118086930|ref|XP_419187.2| PREDICTED: similar to dystrobrevin alpha [Gallus gallus] Length = 742 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 46/155 (29%), Gaps = 10/155 (6%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 N + L + + + + F I ++ RQ I Sbjct: 417 SNPARVLDSASRLDEEHKLIARYAARLAAETSSSQQAQQRGAADISFTIDANKQQRQLIA 476 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432 E + +I+++ R ++ ++ + L +L R+ + Sbjct: 477 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 536 Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 537 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 570 >gi|148652279|ref|YP_001279372.1| SMC domain-containing protein [Psychrobacter sp. PRwf-1] gi|148571363|gb|ABQ93422.1| condensin subunit Smc [Psychrobacter sp. PRwf-1] Length = 1280 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 49/152 (32%), Gaps = 1/152 (0%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 +Y+ + K L + + ++ + + Y+ ++ +K Sbjct: 175 RYQARREETQKKLLRTRENLERLQDIEAELSRQKKKLAKQAESATHYQQLQQQLSEVKEQ 234 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + + ++ + EQ+ K + K + + + + Sbjct: 235 LGTQQLYQAKAAQMQHKAEQEQLTKSLEAQQAQDSMLKQKLAKVSARLAEEQWLKDEARD 294 Query: 421 KKLITRIEFI-LSHKIKSCHTSVSITTRILQS 451 ++ + H++K H+S+S L++ Sbjct: 295 SLHQQDLQRQQVEHQLKELHSSLSQLEGKLRA 326 >gi|261417552|ref|YP_003251234.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC61] gi|297528427|ref|YP_003669702.1| RNA-binding S4 domain protein [Geobacillus sp. C56-T3] gi|319765209|ref|YP_004130710.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC52] gi|261374009|gb|ACX76752.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC61] gi|297251679|gb|ADI25125.1| RNA-binding S4 domain protein [Geobacillus sp. C56-T3] gi|317110075|gb|ADU92567.1| RNA-binding S4 domain protein [Geobacillus sp. Y412MC52] Length = 93 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 7/62 (11%), Positives = 17/62 (27%), Gaps = 3/62 (4%) Query: 469 NNNFITQKRNLATKTRILINFFDGQANAIVIN-KAPPKEQPTKKCQL--HNNKREKQGTQ 525 N + ++ + I F + V + K K++ + Q Sbjct: 31 NGHVAKASSDVKVGDELTIQFGQKRVTVKVTDLKETTKKEEATGLYELIREERTTPAPEQ 90 Query: 526 GE 527 + Sbjct: 91 DD 92 >gi|322372785|ref|ZP_08047321.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus sp. C150] gi|321277827|gb|EFX54896.1| single-stranded-DNA-specific exonuclease RecJ [Streptococcus sp. C150] Length = 736 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 1/74 (1%) Query: 41 ISGYRGIHSSG-HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 ++ R + +G H F +K + D + + EF +G+E V + + G + Sbjct: 489 VTQARTMGQNGAHLKFKVKQGKASFDVVAFNKGDLLQEFQQAQGLELAVTLSVNVWNGQT 548 Query: 100 KYQIIIESLIPSGS 113 Q+++E G Sbjct: 549 TLQLMLEDARVEGI 562 >gi|195352722|ref|XP_002042860.1| GM11528 [Drosophila sechellia] gi|194126907|gb|EDW48950.1| GM11528 [Drosophila sechellia] Length = 347 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 19/206 (9%), Positives = 63/206 (30%), Gaps = 3/206 (1%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN-LEARLNNIIIRLIKYKINTLN 308 + D +++D + +L +P E+A P + ++ L+ + + + Sbjct: 24 DIDGSVSDGSEELEEQSPERIEEIAWPQIKREIGAMNRTLDEMQAQLANDFHERDGGRPD 83 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + L R + E L + + R + + ++ L Sbjct: 84 WEEEHEAAAAKGLEPEDSRWMIMHGSREAALRELQWNNLRIRRQLGDLVRCSELGRARIT 143 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK--NRIFYLHTHIKKLITR 426 + ++Q +Q + K ++ + ++ + K+ Sbjct: 144 ALDRVFQRQTKELIACRQDHERVLSFHLTKQLEAGKCLQRYRYARDLYASWRELFKMGRH 203 Query: 427 IEFILSHKIKSCHTSVSITTRILQSF 452 ++ ++ + + Q+ Sbjct: 204 LKEAYKKILERTQSRLEYAEVKRQAL 229 >gi|83816971|ref|NP_001033043.1| dixin isoform a [Homo sapiens] gi|147641721|sp|Q155Q3|DIXC1_HUMAN RecName: Full=Dixin; AltName: Full=Coiled-coil protein DIX1; Short=Coiled-coil-DIX1; AltName: Full=DIX domain-containing protein 1 Length = 683 Score = 38.6 bits (88), Expect = 2.7, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 275 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 451 Query: 453 AYKNT-LKR 460 +Y L+R Sbjct: 452 SYHQVDLER 460 >gi|219112815|ref|XP_002185991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582841|gb|ACI65461.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 1078 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 17/172 (9%), Positives = 53/172 (30%), Gaps = 3/172 (1%) Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 Q + LE R + L + + + A +Q + + ++ + L Sbjct: 579 KDQHQIDVLEHRCRVLEQSLKQAEDRVIILQQDARQRFEQDENKQQSQMMAFSEKEARLL 638 Query: 340 EIIIFRKYRHFNHI--INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 + + ++ L H+ + R+ + +Q + Q+++ ++E Sbjct: 639 QAAAEDHEHEMRQLRHAQELQVQSLQHSFAEEREAADKARQQLHQLLEDANARADEAERE 698 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + +++ ++ L ++ S+ L Sbjct: 699 SYETKQYQEKSRTQQEQQEVRALRRAEDKLVQAL-AQLDERDESIRTLKTSL 749 >gi|195401098|ref|XP_002059151.1| GJ16188 [Drosophila virilis] gi|194156025|gb|EDW71209.1| GJ16188 [Drosophila virilis] Length = 1916 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 42/138 (30%), Gaps = 5/138 (3%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 ++ L + LD+L E E + + + + ++ Q +L Sbjct: 1161 ARLERELKDLQQSLDKLRAEAEQKQTQLGELEQLAIERDLALGDAGRQREQLEARCQALL 1220 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 ++ + ++Q + E + + L E + + + L + Sbjct: 1221 QQNETLQQQLSNLHSSSTDSNAELLKLSQQLLEH-----QQANEQLATKSSEERAALERQ 1275 Query: 435 IKSCHTSVSITTRILQSF 452 +++ + ++ Sbjct: 1276 LQASQQRLDALCGQVELL 1293 >gi|194432634|ref|ZP_03064920.1| nuclease SbcCD, C subunit [Shigella dysenteriae 1012] gi|194419195|gb|EDX35278.1| nuclease SbcCD, C subunit [Shigella dysenteriae 1012] gi|332085911|gb|EGI91075.1| exonuclease sbcC [Shigella dysenteriae 155-74] Length = 1047 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 39/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRLDELQQEASLRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNTL 399 >gi|104780877|ref|YP_607375.1| exonuclease SbcC [Pseudomonas entomophila L48] gi|95109864|emb|CAK14569.1| exonuclease SbcC [Pseudomonas entomophila L48] Length = 1214 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 55/165 (33%), Gaps = 7/165 (4%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL-EIIIFRKYRHFNHI 353 + + ++ + + L Q L+ +L++ +L L + I+ + Sbjct: 733 RLNQQLQAANDAQQQAQRHLEQQHQALATDEQQLEQSLIDLASVLPQDILQALRDDPANA 792 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + + Q +++ +++Q Q LR ++ + L + Sbjct: 793 FLGLDQQIALRRQQLDQRKDEQEEQQARQGQLDKLRDQQQNRQHNLQQLQHKLTALDEQH 852 Query: 414 FYLHTHIKKL------ITRIEFILSHKIKSCHTSVSITTRILQSF 452 T + +L + + +++ + + T + LQ+ Sbjct: 853 QLARTTLGELLGEQPTAEAWQKHMDTQLEQARATEADTAQHLQAL 897 >gi|146282218|ref|YP_001172371.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri A1501] gi|145570423|gb|ABP79529.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri A1501] Length = 1162 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQSAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L +Q + LR E E+ + I + Sbjct: 245 GQREQVIGDQEVAFEALVAEQRSADASIERLRDGHHELSERFNQVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAEQARLE 330 >gi|42558942|sp|O75334|LIPA2_HUMAN RecName: Full=Liprin-alpha-2; AltName: Full=Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-2; Short=PTPRF-interacting protein alpha-2 gi|3309533|gb|AAC26100.1| liprin-alpha2 [Homo sapiens] Length = 1257 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 34/353 (9%), Positives = 101/353 (28%), Gaps = 23/353 (6%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQL--------QERLELA 392 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + ++ + R L K + +++ +R++ + +EK L R Sbjct: 393 EEKLQQTMRKAETLPEVEAELAQRIAALTKAEETHGNIEERMRHLEGQLEEKNQELQRAR 452 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 ++ ++ R+ + + + + + + KN L Sbjct: 453 QR--------EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|320161646|ref|YP_004174871.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1] gi|319995500|dbj|BAJ64271.1| chromosome segregation protein SMC [Anaerolinea thermophila UNI-1] Length = 1202 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 22/184 (11%), Positives = 52/184 (28%), Gaps = 11/184 (5%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 E Q +L++ R N + R+ + L+ + L + +RL + Sbjct: 309 EERQRALVDQRQRTQNDLERMAEENQARLDKRQTLEEEIQRLLEEQKEAEERLRDARKAL 368 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK-- 396 R R + R H E IE + K+ Sbjct: 369 EARQAERSKLEAQLRDARRLQTQSETRQVQVRAHHTELLHRIENLQSSVQSLQQALKREQ 428 Query: 397 ---EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK------IKSCHTSVSITTR 447 ++ H E+ + + +++ + + L + ++ + Sbjct: 429 EDLQRAQSRHAQWERNRTQAEDTWKKLEETLRTHQQTLRTREEERRALQEERNRLEAEAT 488 Query: 448 ILQS 451 L++ Sbjct: 489 RLRA 492 >gi|313668974|ref|YP_004049258.1| hypothetical protein NLA_16940 [Neisseria lactamica ST-640] gi|313006436|emb|CBN87899.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 1161 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 37/152 (24%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVQLE 343 >gi|301763663|ref|XP_002917261.1| PREDICTED: rho-guanine nucleotide exchange factor-like [Ailuropoda melanoleuca] Length = 1723 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 12/136 (8%), Positives = 36/136 (26%), Gaps = 8/136 (5%) Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL-- 374 L + + L H Q+ ++ Sbjct: 1418 QVHRLVLQQQESLSPGPCFRGTPFQDQEKYRNLEKQREELADIHKLQHRFQQEQRRWHRS 1477 Query: 375 -EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++QQ ++ L+ E + + +L R + ++ +++L Sbjct: 1478 CDQQQREQEAKASRLQERERECRSQEELLLRNRGELDQQLQEYQQSLERLRE-----GQR 1532 Query: 434 KIKSCHTSVSITTRIL 449 ++ + + +L Sbjct: 1533 LVERERERMRVQQSLL 1548 >gi|159045272|ref|YP_001534066.1| hypothetical protein Dshi_2732 [Dinoroseobacter shibae DFL 12] gi|157913032|gb|ABV94465.1| hypothetical protein Dshi_2732 [Dinoroseobacter shibae DFL 12] Length = 137 Score = 38.6 bits (88), Expect = 2.8, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 5/78 (6%) Query: 34 HVCVRGEISGYRGIHSSGH--AYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 V V G + R + H + +L+D I+ ++W + G V G+ Sbjct: 42 RVRVAG-LVLLRQRPGTAHGVIFITLEDETGTINVVVWNAIYERFRRAVIAGRMLRVTGR 100 Query: 92 ITTFPGSSKYQIIIESLI 109 I + +I E + Sbjct: 101 IQ--REGAVLHLIAEDIE 116 >gi|296218680|ref|XP_002807423.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase MRCK gamma-like [Callithrix jacchus] Length = 1552 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 19/222 (8%), Positives = 61/222 (27%), Gaps = 12/222 (5%) Query: 238 NSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII 297 S IP + +++ + D + P + L + Sbjct: 351 ASYIPELRGPMDTSNFDVDDDTLNHPGTLPPPSHGAFSGHHLPFVGFTYTLGSHSLESSS 410 Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 L L + + R++ LE + + + Sbjct: 411 EAWAAMERKLCCLEQEKVELSR-----RHQEAPHAPADHRELEQLRKEVQTLRERLSEML 465 Query: 358 KSDFLIHNIQK----NRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLREQTKN 411 + + + + + QQ ++++ ++ R +++++ +E+ Sbjct: 466 RDKAPLSQMDGPPAGSPGQASDLQQELDRLHQELAEGRAGLQAQEQELCRAQGRQEELLQ 525 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 R+ ++ LS +++ + + S + Sbjct: 526 RLQEAQEREAATASQ-SQALSSQLEEAQAAQRELEAQVSSLS 566 >gi|289166017|ref|YP_003456155.1| peptidase, M23 family [Legionella longbeachae NSW150] gi|288859190|emb|CBJ13122.1| putative peptidase, M23 family [Legionella longbeachae NSW150] Length = 407 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 69/205 (33%), Gaps = 8/205 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + + A + + L E ++ + +L + + ++ K + DQ Sbjct: 76 DAQISSLQQMLNSAHDKRGVINKELSETEKQIGACVQKLRSIQNDINSTENKIVGLQDQV 135 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++ + H +Y+ +IN+ + + + + + +QQ I Sbjct: 136 NQLNKQLTTQQQLLANHIRARYHMGEYQPLKLLINQDDPNKVSRVLTYYQYIVKSRQQLI 195 Query: 381 EQIVKQHLRYIFLEKKEKI-----AILHMLREQTKNRIFYLHTHIKKLITRIEFILS--- 432 QI + ++K + L Q + ++ + LI + + Sbjct: 196 TQIDETRKNLNESKEKLRSELTANKQLKSELTQHQEKLNQNKGYHTALIQSLNHEIQDKQ 255 Query: 433 HKIKSCHTSVSITTRILQSFAYKNT 457 + + + R+L+S + ++ Sbjct: 256 NTLHEAKRNKENLARLLKSLSQQSI 280 >gi|138896305|ref|YP_001126758.1| DNA polymerase III subunit alpha [Geobacillus thermodenitrificans NG80-2] gi|134267818|gb|ABO68013.1| DNA polymerase III alpha subunit [Geobacillus thermodenitrificans NG80-2] Length = 1095 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 5/92 (5%) Query: 29 ESNLSHVCVRGEISGYRGIHSS-G--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIE 85 E + S V V G I+ R + G A+ ++ D ++A+ + + EEG Sbjct: 938 EVHGSPVVVGGCIAELRKTRTKFGEEMAFITVSDESGELEAVAFPSVYARAAGELEEGNF 997 Query: 86 FLVIGKITTFPGSSKYQIIIESLIPSGSGTLL 117 L+ G + + + Q+++ + L Sbjct: 998 VLLAGTVDM--RAGRRQLVLRRAERLPTSALY 1027 >gi|330984024|gb|EGH82127.1| DNA polymerase III subunit alpha [Pseudomonas syringae pv. lachrymans str. M301315] Length = 1201 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 6/101 (5%) Query: 16 SVSELSYHLKHIVES----NLSHVCVRGEISGYRGIHSSGHAY--FSLKDNHSRIDAIIW 69 S+ E++ ++ V+ HV V G +S ++ Y F L D +R+D I+ Sbjct: 969 SLIEIAQSVEDDVDGVEKAKFKHVTVAGLLSDIDARSNTKGTYAFFKLDDGTARLDCSIF 1028 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 ++ + ++ ++ G + P ++ +II+ + P Sbjct: 1029 NKPYHEYQEFMKDDNLVVLNGIVRINPKTNIASLIIDRVQP 1069 >gi|270159151|ref|ZP_06187807.1| M23 peptidase domain protein [Legionella longbeachae D-4968] gi|269987490|gb|EEZ93745.1| M23 peptidase domain protein [Legionella longbeachae D-4968] Length = 386 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 69/205 (33%), Gaps = 8/205 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + + A + + L E ++ + +L + + ++ K + DQ Sbjct: 55 DAQISSLQQMLNSAHDKRGVINKELSETEKQIGACVQKLRSIQNDINSTENKIVGLQDQV 114 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++ + H +Y+ +IN+ + + + + + +QQ I Sbjct: 115 NQLNKQLTTQQQLLANHIRARYHMGEYQPLKLLINQDDPNKVSRVLTYYQYIVKSRQQLI 174 Query: 381 EQIVKQHLRYIFLEKKEKI-----AILHMLREQTKNRIFYLHTHIKKLITRIEFILS--- 432 QI + ++K + L Q + ++ + LI + + Sbjct: 175 TQIDETRKNLNESKEKLRSELTANKQLKSELTQHQEKLNQNKGYHTALIQSLNHEIQDKQ 234 Query: 433 HKIKSCHTSVSITTRILQSFAYKNT 457 + + + R+L+S + ++ Sbjct: 235 NTLHEAKRNKENLARLLKSLSQQSI 259 >gi|194224356|ref|XP_001916455.1| PREDICTED: centrosomal protein 250kDa [Equus caballus] Length = 2306 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 24/195 (12%), Positives = 57/195 (29%), Gaps = 4/195 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E KEHL L + R+ + + +Q Sbjct: 1489 DQEVKSQREQIEELQRQKEHLTQDLERRGQEMLLQKERIQVLEDQRTLQTKILEEDLEQI 1548 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 R R L ++ ++ LI ++ +++ Sbjct: 1549 KLSLRERGRELA-SQRQLMQERAEEGKGQSKAQRGSLEHLKLILRDKEKEVECQQERIQE 1607 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKS 437 Q + L K+ +L Q + I L H+++ + + L +++ Sbjct: 1608 LQEHQDQLEQQLQGLHRKVGETSLLLTQREQEIVVLQQHLQEAREQEELEKQSLQGQLEE 1667 Query: 438 CHTSVSITTRILQSF 452 +++ + L++ Sbjct: 1668 AQRALAQRDQELEAL 1682 >gi|327480470|gb|AEA83780.1| chromosome segregation SMC protein, putative [Pseudomonas stutzeri DSM 4166] Length = 1162 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 16/147 (10%), Positives = 48/147 (32%), Gaps = 11/147 (7%) Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK-----SDFLIHNIQKNRQ 371 +Q LS + E ++ FN + I ++++ + Sbjct: 354 PEQELSGAAAEESAAQLEEAEATMQAWQEQWERFNQHSAEPRRAAEVQQSRIQQLEQSLE 413 Query: 372 HILEKQQHIEQ----IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + E+Q+ ++ + LE E++ + E L+ +++L + Sbjct: 414 RLAERQRRLDDERALLAADPEDRAMLELDEQLTASELDLEALAAVAEELNERLEQLRDEL 473 Query: 428 EFI--LSHKIKSCHTSVSITTRILQSF 452 + +++ ++ L++ Sbjct: 474 QQATRAQQQVQGELQRLNGRIASLEAL 500 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQSAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L +Q + LR E E+ + I + Sbjct: 245 GQREQVIGDQEVAFEALVAEQRSADASIERLRDGHHELSERFNQVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAEQARLE 330 >gi|157824053|ref|NP_001102215.1| liprin-alpha-2 [Rattus norvegicus] gi|149067045|gb|EDM16778.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 (predicted) [Rattus norvegicus] Length = 1251 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + V +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMVSSEGSTESEHLDGMEPGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKDRLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|148710090|gb|EDL42036.1| STE20-like kinase (yeast), isoform CRA_a [Mus musculus] Length = 1293 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 976 FQNVLKNRKKEVMNEVEKAPRELRRELTKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 1035 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 1036 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1089 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1090 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1129 >gi|329663311|ref|NP_001193006.1| STE20-like serine/threonine-protein kinase [Bos taurus] gi|297490945|ref|XP_002698513.1| PREDICTED: Germinal Center Kinase family member (gck-4)-like [Bos taurus] gi|296472806|gb|DAA14921.1| Germinal Center Kinase family member (gck-4)-like [Bos taurus] Length = 1240 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 923 FQNMLKNRKKEVINEVERAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 982 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 983 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1036 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1037 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1076 >gi|284799617|ref|ZP_06390248.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703] gi|284797531|gb|EFC52878.1| putative RecF/RecN/SMC N domain protein [Neisseria subflava NJ9703] Length = 635 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHTLQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ H L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIHQEQQQIRVKLE 343 >gi|241562839|ref|XP_002401475.1| protein NUF1, putative [Ixodes scapularis] gi|215499874|gb|EEC09368.1| protein NUF1, putative [Ixodes scapularis] Length = 1069 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 37/345 (10%), Positives = 101/345 (29%), Gaps = 16/345 (4%) Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRV 174 +L T +++ + L E L + + + + + A + + + R L V Sbjct: 610 SLATDVQRLRLALSESELGRRNQEELLREGAQKVRRLQGELSAGREEAAELRTQRTALEV 669 Query: 175 IIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVR 234 + + + L+ L+ R D + A +E H +E + Sbjct: 670 ALAAANEDKRVVGEALGALTENLHKLEANFKLMRTDQVAKAAQLSQLEREKHSLEERLSE 729 Query: 235 AIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNN 294 A S+ T + A E V + E + Sbjct: 730 AQRELSLSCQQFDSQATSRSQAWGVEANDLRRQKADLERVVQMLEGELKQASARAREAAD 789 Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLS------CSRYRLDRLPRELEHNLEIIIFRKYR 348 ++ + + + +AL + +L R ++ + + + + Sbjct: 790 ERLKRSEERCERGEAEAEALSQQNASLQSRLSELERRLSEEKARQSAQDSRKEEQASWET 849 Query: 349 HFNHIINRIKSDFLIHNIQKNRQ--HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + L + R + + + + H + + ++A L Sbjct: 850 RVRELEQTLANWELSSRWRPPRSCSVGWKSSRSRRRGAEAHHSSESSDVRRELAKEQALS 909 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + +IF R+ L ++ + ++ ++ + Sbjct: 910 KDLRQKIFE--------EKRLSGQLRRQLSTLKEGLTSASQSADA 946 >gi|73998472|ref|XP_863855.1| PREDICTED: similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) isoform 4 [Canis familiaris] Length = 946 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 629 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 688 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 689 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 742 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 743 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 782 >gi|73998468|ref|XP_863816.1| PREDICTED: similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) isoform 2 [Canis familiaris] Length = 957 Score = 38.6 bits (88), Expect = 2.9, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 640 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 699 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 700 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 753 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 754 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 793 >gi|284051544|ref|ZP_06381754.1| hypothetical protein AplaP_08726 [Arthrospira platensis str. Paraca] Length = 688 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 69/244 (28%), Gaps = 32/244 (13%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 D A + S+ ++ R + I +++ L + Sbjct: 350 CDRLKSWLNKAGMADLEESAIRMSTQVDDVDRQLGEFWQEIDQHQISISENRAELSKIET 409 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 L + +L P E L+ + + + S N Q I Q Sbjct: 410 RLDDIKQKLRHFPDEDIQQLQKRLDEIESRIGELNREMGS---------NYQQIETLTQE 460 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 E++ KQ R E K+ A ++ + +++ R++ +++ Sbjct: 461 CEKLSKQIDRQQMNEIKQLTA------QRRIAATEDAIARLSQVLERLDQQFRQQLEK-- 512 Query: 440 TSVSITTRILQ------SFAYKNTLKRGYTSIQDTNNN--FITQKRNLATKTRILINFFD 491 V + + K LK ++ T+ + + ++F Sbjct: 513 -RVQNIFSQISFTPYQPQLSPKYELK----LVERTSGEDAPVASSTG--ENQILSLSFIG 565 Query: 492 GQAN 495 G Sbjct: 566 GIIE 569 >gi|188534675|ref|YP_001908472.1| ATP-dependent dsDNA exonuclease [Erwinia tasmaniensis Et1/99] gi|188029717|emb|CAO97596.1| ATP-dependent dsDNA exonuclease [Erwinia tasmaniensis Et1/99] Length = 1119 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 17/176 (9%), Positives = 57/176 (32%), Gaps = 4/176 (2%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + E R + + + L Q L + + + + Sbjct: 783 RQQALEEERRQQQSRLEALDARSRQQQQTLSECQQQRQRLFGNALVTSVRQQLNGESEKH 842 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + + + + L + + ++ +++ VK+ + L ++ I Sbjct: 843 QHNLHQQQQQWQRLQDRINTLTGQHKSLNEQLVNLHSRLDEAVKRVEQPENLTAQQ--QI 900 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH--TSVSITTRILQSFAYK 455 L E ++ L + +L +++ + +++ V+ + L+ ++Y Sbjct: 901 LQASLEALSQQLRELASRQGQLRQQLDHDAARRLQQQSLLAQVAANEQQLEDWSYL 956 >gi|109138673|gb|ABG25914.1| DIX domain containing 1 isoform l [Homo sapiens] Length = 683 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 275 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 451 Query: 453 AYKNT-LKR 460 +Y L+R Sbjct: 452 SYHQVDLER 460 >gi|269216495|ref|ZP_06160349.1| single-stranded DNA-binding protein [Slackia exigua ATCC 700122] gi|269130024|gb|EEZ61106.1| single-stranded DNA-binding protein [Slackia exigua ATCC 700122] Length = 155 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 10/75 (13%) Query: 41 ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP-- 96 ++ R +G KD + ID ++ + +G + + GK+ + + Sbjct: 42 VNDRRKDPQTGEW----KDFPNYIDCTMFGTRAQSVSRFLSKGSKVAIEGKLRWSQWERD 97 Query: 97 --GSSKYQIIIESLI 109 SK ++I++ + Sbjct: 98 GQKRSKIEVIVDEIE 112 >gi|258544063|ref|ZP_05704297.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258520691|gb|EEV89550.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 905 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 51/163 (31%), Gaps = 25/163 (15%) Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + + + + + RL R + + L + + + + NI++ R + Sbjct: 16 MSRTFRNIGAANSRLMRTFDQNRNALRRLNDQLRNVEAYRRQQESMRQTADNIERMRNRM 75 Query: 374 LEKQQHIEQIVKQHLRYIFLEKK-----EKIAILHMLREQTKNRIFYLHTHIKKL----- 423 QQ + + R+ L + +A L ++ + + R+ L ++ Sbjct: 76 QRLQQQMGGLRHGSQRWRELASQFDRASRDLARLESIQNREQQRLVELTQRLRAAGINTR 135 Query: 424 -----ITRIEFILSHK---IKSCHTSVSIT-------TRILQS 451 R+ + ++ + R LQ+ Sbjct: 136 ELAREEDRLRNSANRTNAELERQAQRLQRIAERHQRNERRLQT 178 >gi|237786617|ref|YP_002907322.1| Single-stranded DNA-binding protein [Corynebacterium kroppenstedtii DSM 44385] gi|237759529|gb|ACR18779.1| Single-stranded DNA-binding protein [Corynebacterium kroppenstedtii DSM 44385] Length = 192 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 21/59 (35%), Gaps = 3/59 (5%) Query: 59 DNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFPGSSKYQIIIESLIPSGSG 114 D + + +W+ ++G+ +V G++ +F Q + + G Sbjct: 50 DGDAMFLTCNVWRQAAENAAESLKKGMRVIVNGRLRQRSFETRDGEQRRVFEIEVDEVG 108 >gi|195397187|ref|XP_002057210.1| GJ16968 [Drosophila virilis] gi|194146977|gb|EDW62696.1| GJ16968 [Drosophila virilis] Length = 1045 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 58/172 (33%), Gaps = 8/172 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + V + N E + + K +L N Q + R+ + Sbjct: 661 GDRKVFDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 720 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 ++ R+ +++ ++ L + K +Q + + + +K H + Sbjct: 721 AQKQYIELEMRKFKRRRMI---LLHELEDQLLRDELSKKQQQLEQAHGML---LKHHEKT 774 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440 LE +++ ++ + EQ + + K + RI+ L K ++ Sbjct: 775 QELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELLRKHALELRQQ 826 >gi|146308553|ref|YP_001189018.1| SMC domain-containing protein [Pseudomonas mendocina ymp] gi|145576754|gb|ABP86286.1| SMC domain protein [Pseudomonas mendocina ymp] Length = 1144 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 25/203 (12%), Positives = 66/203 (32%), Gaps = 4/203 (1%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E + + D A P A + + S L+ + + + L S Sbjct: 528 EQEQRIQDLEAYRAHLQPGEACPLCGSHEHPAVSQYQALDVSATRQALEQCRSDLARLES 587 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK- 368 L + L+ +L + + + + + + +I + +Q+ Sbjct: 588 QGGTLRDELTRLATQIAQLQQQLEQAQQRVAQQDAQWQQQLAEQALQIADGAALRQLQRE 647 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + QH+ + QQ + Q+ + + + + I + R+ L + L R + Sbjct: 648 HEQHLGQLQQRLAQVETR--QAELTQARSAREIAERALADMQQRLALLARDEENLQAR-Q 704 Query: 429 FILSHKIKSCHTSVSITTRILQS 451 + +++ + + L + Sbjct: 705 REQNERLQGLEQELRHHDQALLA 727 >gi|160872306|ref|ZP_02062438.1| chromosome segregation protein SMC [Rickettsiella grylli] gi|159121105|gb|EDP46443.1| chromosome segregation protein SMC [Rickettsiella grylli] Length = 1176 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 61/198 (30%), Gaps = 3/198 (1%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 ADY + + A + + E + + + + + K+ K Sbjct: 713 ADYITQQADLSARQKVKHAQINQAQQHLLKLEKELKETDRLYKTTEEKLQQSIKEKKIAD 772 Query: 316 NSDQTLSCSR-YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + + R L+ + H E K + + H ++ H+ Sbjct: 773 TALKQIEKQRLEHLENKEKRERHYNESARIAKMHEKELHQHALYLQETQHQLKTECTHLT 832 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 +Q + ++ ++ E I L ++ L+ +K+ T++E + Sbjct: 833 NLKQQYHPLEQRLIQLQHQLNAENSIDSLQQQLNAFISKRDTLYLQLKENKTQLET-IER 891 Query: 434 KIKSCHTSVSITTRILQS 451 IK + L S Sbjct: 892 HIKHAEERLHTLENRLNS 909 >gi|303244571|ref|ZP_07330905.1| phosphoesterase RecJ domain protein [Methanothermococcus okinawensis IH1] gi|302485119|gb|EFL48049.1| phosphoesterase RecJ domain protein [Methanothermococcus okinawensis IH1] Length = 643 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 14/97 (14%) Query: 11 DHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKD--NHSRIDAII 68 P ++ E++ K I+E V ++GEI G F++ D + + I A Sbjct: 97 SIPLTTIKEITD--KGILEMRDEVVHIQGEIIQITQTP--GPTIFTITDGTDTAWIAA-- 150 Query: 69 WKGTLNKIEFLPE--EGIEFLVIGKITTFPGSSKYQI 103 + + PE G V+G ++ K QI Sbjct: 151 --FEVAGLRTHPEIMVGDIVDVVGTVSI--RDGKLQI 183 >gi|296212471|ref|XP_002752847.1| PREDICTED: liprin-alpha-2 [Callithrix jacchus] Length = 1257 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 36/354 (10%), Positives = 94/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMASSEGSTESEHLEGLEPGQKIHEKRLSNGSIDSTDDTSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|262171751|ref|ZP_06039429.1| GGDEF family protein [Vibrio mimicus MB-451] gi|261892827|gb|EEY38813.1| GGDEF family protein [Vibrio mimicus MB-451] Length = 371 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 18/186 (9%), Positives = 50/186 (26%), Gaps = 8/186 (4%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 + + L + L + + + L + +Q + R Sbjct: 29 NRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSF 87 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + + ++ + + + + L + RQ + + Sbjct: 88 MSEVFSMQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRSGMSA 141 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 E++EK A L + ++L+ + L K+ + R Sbjct: 142 KEAHAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQLYQANR 200 Query: 448 ILQSFA 453 L++ + Sbjct: 201 QLEALS 206 >gi|194044511|ref|XP_001929443.1| PREDICTED: centrosome-associated protein CEP250 isoform 1 [Sus scrofa] Length = 2440 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 58/195 (29%), Gaps = 4/195 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + E KEHL L E + + R+ + + +Q Sbjct: 1629 DQEMTSQQDQTEELQRQKEHLTQDLKRREQEIVLLKERIQVLEDQRTLQTKILEEDLEQI 1688 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 R R L ++ ++ LI ++ ++ Sbjct: 1689 KMSLRERGRDLA-SQRQLMQERAEEGKGQSKAQRGSLEHMKLILRDKEKEVECQQEHIQE 1747 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR---IEFILSHKIKS 437 Q K L K+ +L Q + I L H+++ + E L +++ Sbjct: 1748 LQEHKAQLEQQLQGLHRKMGETSLLLTQREQEIVALQRHLQEAREQGELKEQSLQGQLEE 1807 Query: 438 CHTSVSITTRILQSF 452 +++ + L++ Sbjct: 1808 AQRALARRDQELKAL 1822 >gi|114640305|ref|XP_001144981.1| PREDICTED: dixin isoform 1 [Pan troglodytes] Length = 683 Score = 38.6 bits (88), Expect = 3.0, Method: Composition-based stats. Identities = 17/189 (8%), Positives = 48/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ +Y + K + L D R L Sbjct: 275 YLETSWEEQLLEQQEYLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDV 451 Query: 453 AYKNT-LKR 460 +Y L+R Sbjct: 452 SYHQVDLER 460 >gi|307110431|gb|EFN58667.1| hypothetical protein CHLNCDRAFT_140952 [Chlorella variabilis] Length = 2507 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 14/200 (7%), Positives = 53/200 (26%), Gaps = 10/200 (5%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 A A + A+ + + + +++ + + + Sbjct: 454 LLAHTAAQQAARDVQAAMEEALATGREEVEKVKQRYDSMLQEMAAFRAERQQWEEGQAAA 513 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 ++ L+ R + + LE + F ++ + + ++ Q Sbjct: 514 ERRLADERQSFEATAKSQREQLEADREQLRSDFEQLVAQQQERAAEWEEAAKQEEAALGQ 573 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--- 434 + + + + L + + RI + R+ ++ Sbjct: 574 HKQARAAAPEVEAAEQRLQRRTEELSGV----ERRITAAQQRLDGEAERLRKAMAGLEEE 629 Query: 435 ---IKSCHTSVSITTRILQS 451 ++ ++ L++ Sbjct: 630 GAGLRERADELAAREESLEA 649 >gi|78213768|ref|YP_382547.1| condensin subunit Smc [Synechococcus sp. CC9605] gi|78198227|gb|ABB35992.1| chromosome segregation protein SMC [Synechococcus sp. CC9605] Length = 1202 Score = 38.2 bits (87), Expect = 3.0, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 71/231 (30%), Gaps = 17/231 (7%) Query: 270 AAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD 329 +A A ++ + + + + ++ + Q L + + L+ Sbjct: 887 SAHGAWRQQQSDLQDKRKQLEQQQSDLQERFGSQRRARDAAEAEVGRQRQALQQAEWNLE 946 Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN-------IQKNRQHILEKQQHIEQ 382 RL + E +E + + ++ + + QQ +E Sbjct: 947 RLKEDREGLIEEQ-RSGAVRLQEMEQALPDPRPEIPDSLRLAGLEALQADLQAIQQRMEA 1005 Query: 383 IVKQHLRYIFLEKK---------EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + ++ + + E++ +L+ RE+ RI + T + + Sbjct: 1006 LEPVNMLALEELEALEERLNELNERLEVLNSEREELLLRIETVATLRQDAFMEAFTAVDG 1065 Query: 434 KIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + S+S LQ L+ G T + + + +++ + Sbjct: 1066 HFREIFASLSDGDGHLQLENPDEPLEGGLTLVAHPKGKTVRRLASMSGGEK 1116 >gi|332230539|ref|XP_003264450.1| PREDICTED: liprin-alpha-4-like [Nomascus leucogenys] Length = 1204 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 50/190 (26%), Gaps = 3/190 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 +A + L + L + L + L ++Q L + + + L Sbjct: 305 YLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEVAEQKLQQTMRKAETL 364 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 P + I H + R + + E + Q +++ Sbjct: 365 PEVEAELAQRIAALTKGHRGRALARDTATKSGRRLAGEGGGGQESGERGSQRMRRGQGRE 424 Query: 392 FLEKKEKIAILHMLR--EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRI 448 + L Q ++ + R+ + + + + Sbjct: 425 SNPSGRGWSSLGGRPGARQAAVQVRQREKMNEDHNKRLSDTVDRLLSESNERLQLHLKER 484 Query: 449 LQSFAYKNTL 458 + + KNTL Sbjct: 485 MAALEEKNTL 494 >gi|302870944|ref|YP_003839580.1| hypothetical protein COB47_0240 [Caldicellulosiruptor obsidiansis OB47] gi|302573803|gb|ADL41594.1| hypothetical protein COB47_0240 [Caldicellulosiruptor obsidiansis OB47] Length = 205 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 4/57 (7%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 K+++ + ++ + R+ + + + R++ + ++ + + + L + Sbjct: 26 KQRLDRVEERLDRVEERLNRVEERLDMVEQRLD-AVERRLDAVEQRLDAVEQRLDAV 81 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 4/64 (6%), Positives = 24/64 (37%), Gaps = 1/64 (1%) Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + +E++ + + + R+ + + + R++ + ++ + + + Sbjct: 26 KQRLDRVEERLDRVEERLNRVEERLDMVEQRLDAVERRLD-AVEQRLDAVEQRLDAVEQR 84 Query: 449 LQSF 452 L + Sbjct: 85 LDTV 88 >gi|301025779|ref|ZP_07189291.1| nuclease sbcCD, subunit C [Escherichia coli MS 196-1] gi|299879982|gb|EFI88193.1| nuclease sbcCD, subunit C [Escherichia coli MS 196-1] Length = 1048 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + S + ++ ++ + L + Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|293408541|ref|ZP_06652380.1| nuclease SbcCD [Escherichia coli B354] gi|291471719|gb|EFF14202.1| nuclease SbcCD [Escherichia coli B354] Length = 1047 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 40/161 (24%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L +L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNSLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHTRQQIKEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + + S + ++ ++ + L + Sbjct: 359 RQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|300798535|ref|NP_001178306.1| liprin-alpha-1 [Bos taurus] gi|297492266|ref|XP_002699470.1| PREDICTED: PTPRF interacting protein alpha 1-like [Bos taurus] gi|296471377|gb|DAA13492.1| PTPRF interacting protein alpha 1-like [Bos taurus] Length = 1202 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 20/181 (11%), Positives = 51/181 (28%), Gaps = 2/181 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 +A + L + + + + L + L ++Q L + R + L Sbjct: 329 YLAAQREATSVHDLNDKLENEIANKDSMHRQTEDKNRQLQERLELAEQKLQQTLRRAETL 388 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 P + + H + + +++ Q + +Q + + + R Sbjct: 389 PEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLS 448 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 K L+ K R+ L L + +++ L++ Sbjct: 449 DTVDKLLSESNERLQLHLKERMAALEDKNSLLRE--VENVKKQLEEMQNDKDQLILNLET 506 Query: 452 F 452 Sbjct: 507 L 507 >gi|115372000|ref|ZP_01459312.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|310824624|ref|YP_003956982.1| hypothetical protein STAUR_7399 [Stigmatella aurantiaca DW4/3-1] gi|115370965|gb|EAU69888.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|309397696|gb|ADO75155.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 1012 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 16/187 (8%), Positives = 49/187 (26%), Gaps = 2/187 (1%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328 + +E L + + L + D+ +R R+ Sbjct: 659 MMESLNNAQQEFGGEQYPELTEKFGKFMEDLQQTVQEQQQVSEATKSLRDKARQQNRERI 718 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + ++ L + + + + + + + + + + ++Q Sbjct: 719 SERGKAMKDELMRQVEQVQKSYAELGPEQLDSRAAAPMAEAQSQLENLKNALKQEDFDLA 778 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 +E L L E+ + ++ +++ V + Sbjct: 779 SEAAQRAEEMAQQLAALGERQRQLDEMFGNPPDAREQ--SAQMAQRLQRDANRVQEVNQQ 836 Query: 449 LQSFAYK 455 LQS + Sbjct: 837 LQSLFPQ 843 >gi|257467552|ref|NP_033315.2| STE20-like serine/threonine-protein kinase isoform 1 [Mus musculus] gi|94730572|sp|O54988|SLK_MOUSE RecName: Full=STE20-like serine/threonine-protein kinase; Short=STE20-like kinase; Short=mSLK; AltName: Full=Etk4; AltName: Full=STE20-related kinase SMAK; AltName: Full=STE20-related serine/threonine-protein kinase; Short=STE20-related kinase; AltName: Full=Serine/threonine-protein kinase 2 gi|124297201|gb|AAI31676.1| STE20-like kinase (yeast) [Mus musculus] Length = 1233 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 916 FQNVLKNRKKEVMNEVEKAPRELRRELTKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 975 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 976 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1029 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1030 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1069 >gi|2773156|gb|AAB96682.1| serine/threonine protein kinase [Mus musculus] Length = 1233 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 916 FQNVLKNRKKEVMNEVEKAPRELRRELTKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 975 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 976 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1029 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1030 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1069 >gi|13507876|ref|NP_109825.1| hypothetical protein MPN137 [Mycoplasma pneumoniae M129] gi|12230685|sp|P75261|Y137_MYCPN RecName: Full=UPF0134 protein MPN_137 gi|1673664|gb|AAB95665.1| hypothetical protein MPN_137 [Mycoplasma pneumoniae M129] Length = 228 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 51/144 (35%), Gaps = 7/144 (4%) Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 DQ L + L + + + N + + L+H Q N+ Sbjct: 62 HKQLDQKLKEFKQDLM-VELHDTFATKADLRDSEARINQKLEALVQVVLLHGEQINKLTQ 120 Query: 374 LEKQQ----HIEQIVKQHLRYIFLEKKEKI-AILHMLREQTKNRIFYLHTHIKKLITRIE 428 + ++Q Q+ ++ R F + +++ +L E T R + + + +R++ Sbjct: 121 IVEKQGEQIRELQVEQKAQRQEFNARMDRLENLLVESIESTNKRFDSIEGRLDSMDSRLD 180 Query: 429 FILSHKIKSCHTSVSITTRILQSF 452 + +++ S + L S Sbjct: 181 -SMENRLDSIEGRLDSVEGRLDSV 203 >gi|31242225|ref|XP_321543.1| AGAP001568-PA [Anopheles gambiae str. PEST] gi|19572387|emb|CAD27933.1| 30E5.11 [Anopheles gambiae] gi|30173787|gb|EAA43164.1| AGAP001568-PA [Anopheles gambiae str. PEST] Length = 615 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 23/197 (11%), Positives = 59/197 (29%), Gaps = 5/197 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D P +A V + + + +R TL+ L + Sbjct: 178 DKVGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQANHWLKSHGDR 237 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R R D REL+ + + + +I + + + RQ ++ Sbjct: 238 LLEDRQRFDNYKRELKETMIRNQQLQRQRKQELIAEEQQSLEVIEGEMRRQQEQDRAALE 297 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQ-TKNRIFYLHTHIKKLITRIEFIL---SHKIK 436 + + + + + RE ++ + ++ ++ I + + H+++ Sbjct: 298 ASKEMRRKNALEAIRMAEDRRTRLRRESEIEDALLQIYCEGQQNIASFKQAIHVNKHRLR 357 Query: 437 SCHTSV-SITTRILQSF 452 + R + Sbjct: 358 DNSHQLVDALERQRAAL 374 >gi|323943202|gb|EGB39358.1| exonuclease SbcC [Escherichia coli E482] Length = 1048 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + S + ++ ++ + L + Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|315180370|gb|ADT87284.1| GGDEF family protein [Vibrio furnissii NCTC 11218] Length = 382 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 57/164 (34%), Gaps = 3/164 (1%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + R ++ L++ + ++ LS + R +++ + Sbjct: 46 RMALFELSRYAEFHFKEEEQLMRDVGIAEAHLSEHI-DVHRTFMSEIFSMQAFLSESDER 104 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + +L ++I Q++ + + IEQ + Y E++++ + L Sbjct: 105 PAVQLLEFLIHWLAYHILGIDQNMARQVKAIEQGLSAQHAY-EQEERQRDSATEPLLNAL 163 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + ++LI R+ L K+ + R L++ + Sbjct: 164 NGLFEQVSERNRELI-RVNQSLEEKVHERTQQLMQANRQLEALS 206 >gi|268316126|ref|YP_003289845.1| hypothetical protein Rmar_0557 [Rhodothermus marinus DSM 4252] gi|262333660|gb|ACY47457.1| hypothetical protein Rmar_0557 [Rhodothermus marinus DSM 4252] Length = 356 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 60/175 (34%), Gaps = 11/175 (6%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI-- 341 ++ + + L++A +++ L RLDRL + +E Sbjct: 18 HPEWRAELRRLVLSEELLRLPELVQQLIEAHRRAEERLQHVEERLDRLEATVAQLVEAQR 77 Query: 342 ----IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY--IFLEK 395 + + + + LI +K + + + + Q+V+ H R Sbjct: 78 KAEERLQHVEERLDRLEATVAQ--LIEAQRKAEERLDRLEATVAQLVEAHRRAEERLDRL 135 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + +A L + + + R+ L + +LI + +++ + + L+ Sbjct: 136 EATVAQLIEAQRKAEERLDRLEATVAQLIE-AQRKAEERLQRTEARLERVEKRLE 189 >gi|170088352|ref|XP_001875399.1| kinesin heavy chain [Laccaria bicolor S238N-H82] gi|164650599|gb|EDR14840.1| kinesin heavy chain [Laccaria bicolor S238N-H82] Length = 965 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 16/154 (10%), Positives = 52/154 (33%), Gaps = 8/154 (5%) Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK---YRHFNHIINRIKSDFLIHNIQ 367 + L + + ++ D + + L H+L+ + + I + + N + Sbjct: 759 AQDLERTRKAINVQLAEFDGVKKSLMHDLQNRCEKVVELEIQLDEIKEQYNNVIRNSNSK 818 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ + ++++EQ+ + + K++ I RI L ++ Sbjct: 819 AQQKKMAFLERNLEQLTLVQKQLVDQNSTLKKEAGIAERKLLARNERIQNLEALLQDADR 878 Query: 426 RI---EFILSHKIKSCHTSVSITTRILQSFAYKN 456 R+ ++++ + + + N Sbjct: 879 RLSVQNQKFEAQLQAVKERLDQARAQKAASSPLN 912 >gi|16128382|ref|NP_414931.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. MG1655] gi|89107267|ref|AP_001047.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. W3110] gi|170079983|ref|YP_001729303.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. DH10B] gi|238899685|ref|YP_002925481.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BW2952] gi|256023986|ref|ZP_05437851.1| exonuclease subunit SbcC [Escherichia sp. 4_1_40B] gi|300947958|ref|ZP_07162103.1| nuclease sbcCD, subunit C [Escherichia coli MS 116-1] gi|300957956|ref|ZP_07170123.1| nuclease sbcCD, subunit C [Escherichia coli MS 175-1] gi|301647314|ref|ZP_07247128.1| nuclease sbcCD, subunit C [Escherichia coli MS 146-1] gi|307137039|ref|ZP_07496395.1| exonuclease subunit SbcC [Escherichia coli H736] gi|331640911|ref|ZP_08342046.1| nuclease sbcCD, subunit C [Escherichia coli H736] gi|134253|sp|P13458|SBCC_ECOLI RecName: Full=Nuclease sbcCD subunit C gi|42914|emb|CAA34104.1| unnamed protein product [Escherichia coli K-12] gi|1657593|gb|AAB18121.1| exonuclease SbcC [Escherichia coli str. K-12 substr. MG1655] gi|1786597|gb|AAC73500.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. MG1655] gi|85674537|dbj|BAE76177.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K12 substr. W3110] gi|169887818|gb|ACB01525.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli str. K-12 substr. DH10B] gi|238861057|gb|ACR63055.1| exonuclease, dsDNA, ATP-dependent [Escherichia coli BW2952] gi|260450416|gb|ACX40838.1| exonuclease SbcC [Escherichia coli DH1] gi|300315350|gb|EFJ65134.1| nuclease sbcCD, subunit C [Escherichia coli MS 175-1] gi|300452457|gb|EFK16077.1| nuclease sbcCD, subunit C [Escherichia coli MS 116-1] gi|301074539|gb|EFK89345.1| nuclease sbcCD, subunit C [Escherichia coli MS 146-1] gi|315135079|dbj|BAJ42238.1| exonuclease subunit SbcC [Escherichia coli DH1] gi|315616665|gb|EFU97282.1| exonuclease sbcC [Escherichia coli 3431] gi|323938581|gb|EGB34830.1| exonuclease SbcC [Escherichia coli E1520] gi|331037709|gb|EGI09929.1| nuclease sbcCD, subunit C [Escherichia coli H736] gi|332341758|gb|AEE55092.1| exonuclease subunit SbcC [Escherichia coli UMNK88] gi|1586769|prf||2204364A sbcC gene Length = 1048 Score = 38.2 bits (87), Expect = 3.1, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + S + ++ ++ + L + Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|326934576|ref|XP_003213364.1| PREDICTED: rho guanine nucleotide exchange factor 18-like, partial [Meleagris gallopavo] Length = 1048 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 62/196 (31%), Gaps = 7/196 (3%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 P A E + Q ++ + + +++ I+ + L SL + D + Sbjct: 737 DPPFDAEEGSQTSNTTRQDDSSGVQPTVESQLVQRIQTLLQLLFSLQAVISQQDSYIEL- 795 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 R + RE ++ L+ N K + ++QK + + +QQ E+ Sbjct: 796 -QRATMVDREKQYRLQSTRGNLLLEQEKQRNFEKQREELMHVQKLQSQLKLEQQRWER-E 853 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 + R + + Q K ++ + R H ++ + Sbjct: 854 RSQQRRELEISEAHLQRREEETRQLKEKLIQDREEL----ERQREAYQHDLERLREAQRA 909 Query: 445 TTRILQSFAYKNTLKR 460 + + LK+ Sbjct: 910 VEKERERLDQLRKLKK 925 >gi|326913030|ref|XP_003202845.1| PREDICTED: pleckstrin homology-like domain family B member 2-like [Meleagris gallopavo] Length = 1258 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 17/172 (9%), Positives = 57/172 (33%), Gaps = 3/172 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 L A L +I + L++ + L + S + +LD P + L+ Sbjct: 647 LDHLNRKIAELERNVIGEKAKEKLKLDAEREKLERLQELYSEQKTQLDNCPESMREQLQQ 706 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + L ++ + E+++++ Q + + + + Sbjct: 707 QLKRDADLLDIESKHFE--DLEFQQLEHESRLDEEKENLTQQLLREVAEYQRSIVSRKEK 764 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L++Q + + + ++ ++ ++ + + + Sbjct: 765 ISALKKQANHIVQQAQREQDHFVKEKNNLI-MMLQREKENLCNLEKKYSTLS 815 >gi|317492789|ref|ZP_07951213.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918911|gb|EFV40246.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA] Length = 1228 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 54/192 (28%), Gaps = 9/192 (4%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP---------NS 317 + + +++ +Q+ L + + + L Sbjct: 736 TSHTIQQITLLEQSIQTQRRQLAEWREEYHKQTSHQQQRQERLATELLELHLVAPLAGEE 795 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 ++ L+ + H+ ++ + + L +Q E++ Sbjct: 796 NEWLAAREQEFSLWQQRQLHSQKLTLENTRLSADEQNLSQTLATLEKQWLTQQQLCAEQE 855 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + Q+ + + + + + EQ H + + + LS ++ S Sbjct: 856 KLLAQMQAERQTLLDGRSVDDVRRSLVQTEQLAEHQLQQAQHAESTVRQQLDKLSGELSS 915 Query: 438 CHTSVSITTRIL 449 +S + L Sbjct: 916 AQQQLSQLEQRL 927 >gi|109090484|ref|XP_001114162.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 2 [Macaca mulatta] Length = 1236 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 919 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 979 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072 >gi|300726791|ref|ZP_07060221.1| conserved hypothetical protein [Prevotella bryantii B14] gi|299775904|gb|EFI72484.1| conserved hypothetical protein [Prevotella bryantii B14] Length = 472 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 15/176 (8%), Positives = 49/176 (27%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 L ++ + +L +++ + + + + Sbjct: 21 SNNKHHQQETQLMSQRDIFQTKLESITQQNQHAIESLNKQLQEERERNAQEKEEARKLFL 80 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + + R I + K + N Q ++ ++Q ++ + + Sbjct: 81 YEKNELRTEYVRQLEIIRQQHKESLEQQSKLINEQIHHASEEILKQRSEELSQTNQQQLS 140 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + LH +Q K + + R++ + +K ++ Q+ Sbjct: 141 AILTPLHENIKQMKEAVEKNDRDQSLSLERLDASIKANLKQAQEVGERADKLAQAL 196 >gi|300694449|ref|YP_003750422.1| transmembrane protein, duf802 [Ralstonia solanacearum PSI07] gi|299076486|emb|CBJ35806.1| putative transmembrane protein, DUF802 [Ralstonia solanacearum PSI07] Length = 698 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 27/232 (11%), Positives = 62/232 (26%), Gaps = 42/232 (18%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDR----------------LPRELEHNLEIIIFRKYR 348 L ++ TL+ R L + E ++ R + Sbjct: 389 QAWAEALSRQDQTNATLTGHHQRAMEAATAAFEQHASRLLHTLHQSHEDLQAGLVSRDQQ 448 Query: 349 HFNHIINRIKSDF--LIHNIQKNRQHILEKQQH----IEQIVKQHLRYIFLEKKEKIAIL 402 + S L ++ +QQ + + E I + Sbjct: 449 RLAAWTETLGSMAATLSQEWEQAGTRTASRQQEICETLARTAHDISARTQAHASETINEI 508 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSH---KIKSCHTSVSITTRILQSFAYKNTLK 459 L + + +L ++ + ++ ++ +L + + +T + Sbjct: 509 SRLVQAASEAPRAAAEVVAELRQKLADSMVRDTEMLEERGRLLATLETLLDAVNHASTEQ 568 Query: 460 RGYTSIQDTNNNFITQKRNLATKTRILINFFD---------GQANAIVINKA 502 R +++ + T L R+ F D G A A + A Sbjct: 569 R--SAV---DGLISTSADLL---DRVGTRFADKVEAEGERLGTAAAQITGSA 612 >gi|258624398|ref|ZP_05719345.1| GGDEF family protein [Vibrio mimicus VM603] gi|258583245|gb|EEW08047.1| GGDEF family protein [Vibrio mimicus VM603] Length = 371 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 18/186 (9%), Positives = 50/186 (26%), Gaps = 8/186 (4%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 + + L + L + + + L + +Q + R Sbjct: 29 NRYSSLLAENHVSLDEIRLALFELSRYSEYHFKEEEKLMREVGISPL-HLEQHIQVHRSF 87 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + + ++ + + + + L + RQ + ++ Sbjct: 88 MSEVFSMQAFIHDVDDRSAVQLLEFLTHWLAYHILGMDQNMARQVMA------IRLGMSA 141 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 E++EK A L + ++L+ + L K+ R Sbjct: 142 KEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTKQFYQANR 200 Query: 448 ILQSFA 453 L++ + Sbjct: 201 QLEALS 206 >gi|18858271|ref|NP_571888.1| angiopoietin-1 [Danio rerio] gi|15077794|gb|AAK83347.1| angiopoietin-1 [Danio rerio] Length = 513 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 15/196 (7%), Positives = 63/196 (32%), Gaps = 5/196 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSLLKALPNSD 318 D P + + ++ +++ L+ N I + ++ + Sbjct: 81 DAPQPEADLSNQKIQQLEHVMENYTQWLQKIENYIKDNMKTEMVQLQQSAVHNHTAAMLE 140 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 S ++ + + +++ + N + ++ L + I + Sbjct: 141 MGTSLLSQTAEQTRKLTDVETQVLNQTSRLEIQLLENSLSTNKLEKQLMIQINEINKIHD 200 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IK 436 + ++ ++ + ++++ L + + + + I++L ++ + ++ Sbjct: 201 KNGFL-EEKMQELEDRHRQELESLRTEKSDLQALVSRQSSVIRELENQLSRATGNSTALQ 259 Query: 437 SCHTSVSITTRILQSF 452 + + R L S Sbjct: 260 RQQQDLMESMRSLLSL 275 >gi|75907930|ref|YP_322226.1| exonuclease SbcC [Anabaena variabilis ATCC 29413] gi|75701655|gb|ABA21331.1| Exonuclease SbcC [Anabaena variabilis ATCC 29413] Length = 1008 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 53/196 (27%), Gaps = 4/196 (2%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN- 316 D ++ +++ + + AR R + K + K L Sbjct: 598 QVGDFALDQQAELRQLEQYLQQLNYNEQDHALARSEVERWRWAEIKQGQIKDASKRLATL 657 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 + + R + + ++ I + HN + + Sbjct: 658 AARKPELQAQITQLQTRIQQEQTDSEDAQQIAALEEQIAELGYSSEQHNNLRLAVRQSQA 717 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL--SHK 434 Q Q + + + + + + R L T I L+ ++ + Sbjct: 718 WQLRYQQLLSAQQQYPQLQGRLQDLEVSKLARLQER-QQLATQIDSLVEQLAQAANPREQ 776 Query: 435 IKSCHTSVSITTRILQ 450 I++ ++ R L Sbjct: 777 IQALEQQLATRRRQLD 792 Score = 37.0 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 15/181 (8%), Positives = 44/181 (24%), Gaps = 16/181 (8%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 E + ++ + + L + + + + + Sbjct: 633 EVERWRWAEIKQGQIKDASKRLATLAARKPELQAQITQLQTRIQQEQTDSEDAQQI--AA 690 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV------------KQ 386 LE I N + Q Q +L QQ Q+ + Sbjct: 691 LEEQIAELGYSSEQHNNLRLAVRQSQAWQLRYQQLLSAQQQYPQLQGRLQDLEVSKLARL 750 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH--KIKSCHTSVSI 444 R + + + + +I L + +++ ++ +++ + Sbjct: 751 QERQQLATQIDSLVEQLAQAANPREQIQALEQQLATRRRQLDEQITQLGRLEQLAHQLET 810 Query: 445 T 445 Sbjct: 811 L 811 >gi|309700658|emb|CBI99954.1| exonuclease SbcC [Escherichia coli ETEC H10407] Length = 1048 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 38/161 (23%), Gaps = 12/161 (7%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 L L D+ + R L + L + ++ + Sbjct: 239 QQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWER 298 Query: 364 -----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRI 413 + RQ I E ++ + K+ + Q +R Sbjct: 299 IAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRF 358 Query: 414 FYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + + S + ++ ++ + L + Sbjct: 359 RQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|291405461|ref|XP_002718960.1| PREDICTED: myosin 18A [Oryctolagus cuniculus] Length = 2038 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 16/196 (8%), Positives = 61/196 (31%), Gaps = 5/196 (2%) Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 + D+ + A + + + + I + +I+ + A Sbjct: 1669 VMLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKTKTA 1728 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQH 372 L L + + E + ++ ++ + + L +++ + Sbjct: 1729 LEEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKE 1788 Query: 373 ILEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIE 428 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1789 KQELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLEGLASRLK 1848 Query: 429 FILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1849 ENMEKLTEERDQRIAA 1864 >gi|222153151|ref|YP_002562328.1| DNA polymerase III DnaE [Streptococcus uberis 0140J] gi|222113964|emb|CAR42236.1| DNA polymerase III alpha subunit [Streptococcus uberis 0140J] Length = 1034 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + ++ D + D ++ +K+ L EG + G++ + Q+++E++ + S Sbjct: 910 FLTVTDTKKKCDVTVFPEQFSKVHSLLVEGQMVFIQGRVK--ERDGRLQVVLENIEMASS 967 Query: 114 GTLLTALE 121 +E Sbjct: 968 KNFWLLVE 975 >gi|195438429|ref|XP_002067139.1| GK24176 [Drosophila willistoni] gi|194163224|gb|EDW78125.1| GK24176 [Drosophila willistoni] Length = 1944 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 11/131 (8%), Positives = 35/131 (26%), Gaps = 2/131 (1%) Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + D L + +LE I + + ++ Q E Sbjct: 1137 QELKEIQDALSKLKAESLEKQTQLTQLEEQSIQKELALGDASRQQENLKERCQALAQQNE 1196 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + +Q ++ + ++ + + K R L ++++ Sbjct: 1197 TLQQQLNALQNSSTDSNAELVKLSQKLVEEQQAKEELSAKSNEER--ASLESQLQANQQR 1254 Query: 442 VSITTRILQSF 452 + +++ Sbjct: 1255 LDTLCSQVEAL 1265 >gi|195388517|ref|XP_002052926.1| GJ19558 [Drosophila virilis] gi|194149383|gb|EDW65081.1| GJ19558 [Drosophila virilis] Length = 1983 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 11/132 (8%), Positives = 44/132 (33%), Gaps = 3/132 (2%) Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + ++D L + + + + + L + + ++QQ Sbjct: 1330 VQYMSKQMDMLSCQESKA-KSTLEETIALLQQTQH--SCEELRQQLHEKDVEWAQRQQER 1386 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 E + + L+ + +E I + ++++ K+ + ++H+++ Sbjct: 1387 EHLQRTELQQAQEKVQEVQLIAKERFRELESQLQAKDEEKKEALQAYHQEIAHQLRHKQQ 1446 Query: 441 SVSITTRILQSF 452 ++ + + Sbjct: 1447 QLTFAEQQVLQL 1458 >gi|311263904|ref|XP_003129917.1| PREDICTED: dixin-like [Sus scrofa] Length = 818 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 26/236 (11%), Positives = 75/236 (31%), Gaps = 9/236 (3%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285 ++ +I ++ + II + G E D + D R +P E + + Q Sbjct: 364 SESIITQSEEKADFVIIPSEGIENRTEEIDSPLSRDWRPGSPGTYLETSWEEQLLEQQEH 423 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + E +I ++ + + ++L + + Sbjct: 424 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQLIIIQSRLDQSMEEN 483 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + + ++ L +Q + ++ + Q+ ++ LR + + LH Sbjct: 484 QDLKKELLKYKQEARNLQGIKDALQQRLTQQDTSVLQLKQELLRANMDKDE-----LHNQ 538 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + ++ + + + + ++ + R L +Y+ L+R Sbjct: 539 NVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSEASYQQVDLER 593 >gi|301614754|ref|XP_002936852.1| PREDICTED: STE20-like serine/threonine-protein kinase [Xenopus (Silurana) tropicalis] Length = 1329 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 43/130 (33%), Gaps = 3/130 (2%) Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 ++ + ++ + L+ + + + I+ D L H Q R Sbjct: 1039 MKRKKEELAQSQHAQEQEFVQKQQQELDGSLKKIIHQQKTELANIERDCLNHKQQLMRAR 1098 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + E+ +++ + + + K++ M R Q R +++ R+ L Sbjct: 1099 EAAIWELEERHLQEKHQLLKQQLKDQ---YFMQRHQLLKRHEKEMEQMQRYNQRLIEELK 1155 Query: 433 HKIKSCHTSV 442 ++ + Sbjct: 1156 NRQTQERARL 1165 >gi|183598375|ref|ZP_02959868.1| hypothetical protein PROSTU_01767 [Providencia stuartii ATCC 25827] gi|188020551|gb|EDU58591.1| hypothetical protein PROSTU_01767 [Providencia stuartii ATCC 25827] Length = 1481 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 13/178 (7%), Positives = 49/178 (27%), Gaps = 9/178 (5%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 + L +L + + + + L L + + ++ + ++ Sbjct: 425 RARELCQLPDLSIENADEWLETFEAREQQATEALLTLEQKISVADAAHSQFEQAYQLVKS 484 Query: 338 NLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + + + L +Q R + E QQ ++ K Sbjct: 485 MVGEVSRSEAYQQARALLRDWSSQQHLAERVQPLRMQLAELQQRLDSQQNAERLLNEFCK 544 Query: 396 KEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448 + + + + + + R++ + +++ + + T Sbjct: 545 RHNKSYEPDELDGLMAELEAQQEELSVGVNESGERRMQ--MRQELEQIRQRIQVLTAK 600 >gi|167538540|ref|XP_001750933.1| hypothetical protein [Monosiga brevicollis MX1] gi|163770571|gb|EDQ84258.1| predicted protein [Monosiga brevicollis MX1] Length = 544 Score = 38.2 bits (87), Expect = 3.2, Method: Composition-based stats. Identities = 14/163 (8%), Positives = 46/163 (28%), Gaps = 9/163 (5%) Query: 297 IRLIKYKINTLNSL-------LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + + K+LP + + L + RL + L Sbjct: 355 MHRVDTLRQRAQCSDVSAPLSAKSLPEAWEQLCQAHERLSSPKQNGLEQLADWRAEHDYE 414 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLRYIFLEKKEKIAILHMLRE 407 +Q+ + I + + + + +++ I +++ +H Sbjct: 415 HQDWYLAFVLHETQALLQQLQDMIDWQAKTLSVVTLCEEYASSITQSSADQVVSIHEEVA 474 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + +I + + + + + +S + L+ Sbjct: 475 ELQKKIQATTAFLAFVSDDMRAGIQANLDEEKERLSTLQQQLE 517 >gi|312385329|gb|EFR29856.1| hypothetical protein AND_00897 [Anopheles darlingi] Length = 742 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 17/218 (7%), Positives = 60/218 (27%), Gaps = 19/218 (8%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D+ L+ A +E Q +N + R + + L+ L Sbjct: 488 LDHKTRLQWIAALQLAITYSTGREGFQRDTVNRRRQQRESEQRRRLEEEQLRSQHLRKLE 547 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + L + + + R ++ + ++ + + ++ Sbjct: 548 ETHVQLEREKQARMAAESQARQYEAVAREDSRRVAELEDVKLCLEKMLEDEIQAKRDEEI 607 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE-FILSHK 434 + +++ + ++ + +L ++ + RI + + +E + + Sbjct: 608 VRALQARVLAEEWEKREELEQLQAEQTSLLEQERQKRIEFEGRQQQNEQKLLEAQAMLRQ 667 Query: 435 IKSCHTSVSI------------------TTRILQSFAY 454 ++ + LQ+ + Sbjct: 668 LEEERKRLDRELKLARQKIQLSEDNKGIVEAKLQAMSP 705 >gi|159029839|emb|CAO90893.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1009 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 24/207 (11%), Positives = 62/207 (29%), Gaps = 24/207 (11%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 + +E L L+ N + + + L + L + Sbjct: 213 STQINQINQEQEVNNWRLQQLQGEENQRQNWEKQLQWQREREQERVLLAEIERLDREKVS 272 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 LD +++ L H I K L +Q +Q +KQQ +++ ++ Sbjct: 273 LDNQLNQIKTILHRKNDIITAHERLINLDQKEASLSSQLQAWQQAQYDKQQLEQKLQQKI 332 Query: 388 LRYIFLEKKEKIAILHMLREQTKNR--------IFYLHTHIKKLITRIEFI--------- 430 + ++ + + R++ + + I + R++ + Sbjct: 333 NEFTLPIQQTSARLEELRRQEQETQKIIEQAGDIQAALEKLNYHRQRLQELDRLALKYAP 392 Query: 431 -------LSHKIKSCHTSVSITTRILQ 450 L+ +++ ++ LQ Sbjct: 393 LNSRKADLNMQLEREKARINARREQLQ 419 >gi|60360056|dbj|BAD90247.1| mKIAA1052 protein [Mus musculus] Length = 1172 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 13/145 (8%), Positives = 42/145 (28%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + +E E +K + S + Sbjct: 501 AKHQEVISSLQKKIEGAQQKEEAQLQESLGWAEQRAHQKVHQVTEYEQELSSLLRDKRQE 560 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 R+H + + E+ ++ + E+ L + L ++ + + Sbjct: 561 VEREHERKMDKMKEEHWQEMADARERYEAEERKQRADLLGHLTGELERLRRAHERELESM 620 Query: 428 EFILSHKIKSCHTSVSITTRILQSF 452 +++ R LQ Sbjct: 621 RQEQDQQLEDLRRRHRDHERKLQDL 645 >gi|332212748|ref|XP_003255481.1| PREDICTED: LOW QUALITY PROTEIN: STE20-like serine/threonine-protein kinase-like [Nomascus leucogenys] Length = 1236 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 919 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 979 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072 >gi|318604578|emb|CBY26076.1| exonuclease SbcC [Yersinia enterocolitica subsp. palearctica Y11] Length = 1229 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 19/194 (9%), Positives = 62/194 (31%), Gaps = 8/194 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 A +A Q L + + LI + ++L L L + ++ +L+ Sbjct: 336 ANLARQQHATNQHEQETLIEQKVIPLDNLIAQQQHSLMLLGTQLEQLRTKENQNKQQLEL 395 Query: 331 LPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 ++ + + + H + + + + Q + + ++Q + Q Sbjct: 396 SKQQSKLAHQRLQQLTEYTQQHAHHQHWEKNLPLWREQFRQLQMQQQQSVESEQQLQQQA 455 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-IKSCHTSVSITTRI 448 + +++I L+ +Q + + H+ + ++ + + + + Sbjct: 456 TLLATLQQQIDTLNEQDKQQQAALVQAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQ 515 Query: 449 ------LQSFAYKN 456 L + + Sbjct: 516 RPVRQQLAALSPLA 529 >gi|194760671|ref|XP_001962561.1| GF14378 [Drosophila ananassae] gi|190616258|gb|EDV31782.1| GF14378 [Drosophila ananassae] Length = 8003 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 21/212 (9%), Positives = 56/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L +A + R + L ++ + + Sbjct: 7319 HFNIQKLSHAIGNVQSQSSDLALVNQQAQALIRQADARNRQLIEQDNAGLNRSWQDLVHS 7378 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 7379 LEQRRDNLQQLAEHWDG-FENGLHGWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7437 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7438 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLREKEQQ 7497 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7498 VSKDLEEIEQVFRRISQLQDKLNALHEQLQSV 7529 >gi|190337593|gb|AAI63531.1| Angiopoietin 1 [Danio rerio] gi|190339926|gb|AAI63513.1| Angiopoietin 1 [Danio rerio] Length = 513 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 15/196 (7%), Positives = 63/196 (32%), Gaps = 5/196 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSLLKALPNSD 318 D P + + ++ +++ L+ N I + ++ + Sbjct: 81 DAPQPEADLSNQKIQQLEHVMENYTQWLQKIENYIKDNMKTEMVQLQQSAVHNHTAAMLE 140 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 S ++ + + +++ + N + ++ L + I + Sbjct: 141 MGTSLLSQTAEQTRKLTDVETQVLNQTSRLEIQLLENSLSTNKLEKQLMIQINEINKIHD 200 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IK 436 + ++ ++ + ++++ L + + + + I++L ++ + ++ Sbjct: 201 KNGFL-EEKMQELEDRHRQELESLRTEKSDLQALVSRQSSVIRELENQLSRATGNSTALQ 259 Query: 437 SCHTSVSITTRILQSF 452 + + R L S Sbjct: 260 RQQQDLMESMRSLLSL 275 >gi|114570243|ref|YP_756923.1| RND family efflux transporter MFP subunit [Maricaulis maris MCS10] gi|114340705|gb|ABI65985.1| efflux transporter, RND family, MFP subunit [Maricaulis maris MCS10] Length = 421 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 48/179 (26%), Gaps = 18/179 (10%) Query: 336 EHNLEIIIFRKYRHF--NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 LE I + + + L + R + E Q + R + L Sbjct: 110 NPALEREIADSLVRLGRDSLAIEAQIADLNRRVSDARSQLREISFRKRQAETELERNLVL 169 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E++ + M R + + + + + ++ L+ + Sbjct: 170 EQRGFASPARMARLRDEVAFYAAEE---LDASNVLNAARLDADRRSERLNAAQARLERLS 226 Query: 454 YKNTLKR--GYTSIQDTNNNFITQKRNLATKTRILI-----NFFDG---QANAIVINKA 502 ++ R G + L+ ++ +G + A V+ A Sbjct: 227 -QSIADRLDGLAIRAPGDGQI--SGLALSVGEPVVAGDVLFTLTEGRPDRVTAQVMESA 282 >gi|45383530|ref|NP_989639.1| amyloid beta A4 protein [Gallus gallus] gi|9837547|gb|AAG00594.1|AF289219_1 beta-amyloid precursor protein 751 isoform [Gallus gallus] Length = 751 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 23/212 (10%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S +P +A + T D E Sbjct: 322 GGCGGNRNNFDSEEYCMAVCGSVLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSFLYN 531 >gi|313679014|ref|YP_004056753.1| metal dependent phosphohydrolase [Oceanithermus profundus DSM 14977] gi|313151729|gb|ADR35580.1| metal dependent phosphohydrolase [Oceanithermus profundus DSM 14977] Length = 583 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 47/137 (34%), Gaps = 4/137 (2%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 L R RL + L + + R + + ++ R+ + Sbjct: 49 RSRLEAERRRLVEETQREVEQLRQSAREEAARLSEQARR-ELEEARAEARQLRERAEAEA 107 Query: 378 QHIEQIVKQHLRYIFLEKKEKI-AILHMLREQTKNRIFYLHTHIKKLITRIEFILSH--K 434 + ++ ++ E+++++ A L RE+ + + + ++L + E + + Sbjct: 108 DRLRAKLEAEMKERLAEERQRLEADLARDRERIERDLEAIRREREELKRQDERLARRGEQ 167 Query: 435 IKSCHTSVSITTRILQS 451 + + + L + Sbjct: 168 LDARAARLDELEEKLNA 184 >gi|296234646|ref|XP_002762551.1| PREDICTED: hypothetical protein LOC100393763 [Callithrix jacchus] Length = 376 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 57/171 (33%), Gaps = 20/171 (11%) Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + RL + + SL + + L+ L L H + + + Sbjct: 1 MGRLAENRRQQAQSL-----SPLKILTEHLQSLSPLKILTGHLRWLSPLKILAPLKILAG 55 Query: 356 RIKSDFLIHNIQKNRQHILEKQ---QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 ++S + + ++ Q + + +H++ + + L+ + IL + Sbjct: 56 HLQSLSPLKILTEHLQSLSPLKILTEHLQSLSPLKILTEHLQSLSPLKILAEHLQSLSP- 114 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTS----VSITTRILQSFAYKNTLK 459 +K L ++ + KI + H + I T LQS + L Sbjct: 115 -------LKILTEHLQSLAPLKILTEHLQSLSPLKILTEHLQSLSPLKILA 158 >gi|194041975|ref|XP_001929465.1| PREDICTED: STE20-like kinase isoform 2 [Sus scrofa] Length = 1237 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 920 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 979 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 980 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1033 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1034 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1073 >gi|148724939|emb|CAK03873.2| angiopoietin 1 [Danio rerio] gi|148725450|emb|CAN87998.1| angiopoietin 1 [Danio rerio] gi|148725995|emb|CAN87959.1| angiopoietin 1 [Danio rerio] Length = 513 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 15/196 (7%), Positives = 63/196 (32%), Gaps = 5/196 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTLNSLLKALPNSD 318 D P + + ++ +++ L+ N I + ++ + Sbjct: 81 DAPQPEADLSNQKIQQLEHVMENYTQWLQKIENYIKDNMKTEMVQLQQSAVHNHTAAMLE 140 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 S ++ + + +++ + N + ++ L + I + Sbjct: 141 MGTSLLSQTAEQTRKLTDVETQVLNQTSRLEIQLLENSLSTNKLEKQLMIQINEINKIHD 200 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IK 436 + ++ ++ + ++++ L + + + + I++L ++ + ++ Sbjct: 201 KNGFL-EEKMQELEDRHRQELESLRTEKSDLQALVSRQSSVIRELENQLSRATGNSTALQ 259 Query: 437 SCHTSVSITTRILQSF 452 + + R L S Sbjct: 260 RQQQDLMESMRSLLSL 275 >gi|48257281|gb|AAH41626.2| DIXDC1 protein [Homo sapiens] Length = 357 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 9/125 (7%), Positives = 35/125 (28%), Gaps = 6/125 (4%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 ++ + + + + + + QQ + Q L+ + Sbjct: 13 IQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRAN 70 Query: 399 IAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + + + ++ + + + + ++ + R L +Y Sbjct: 71 MDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSDVSYHQ 129 Query: 457 T-LKR 460 L+R Sbjct: 130 VDLER 134 >gi|41281453|ref|NP_055535.2| STE20-like serine/threonine-protein kinase [Homo sapiens] gi|74762732|sp|Q9H2G2|SLK_HUMAN RecName: Full=STE20-like serine/threonine-protein kinase; Short=STE20-like kinase; Short=hSLK; AltName: Full=CTCL tumor antigen se20-9; AltName: Full=STE20-related serine/threonine-protein kinase; Short=STE20-related kinase; AltName: Full=Serine/threonine-protein kinase 2 gi|11385654|gb|AAG34908.1|AF273048_1 CTCL tumor antigen se20-9 [Homo sapiens] gi|55664645|emb|CAH70404.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens] gi|55957391|emb|CAI12395.1| Ste20-related serine\/threonine kinase (SLK) [Homo sapiens] gi|119570000|gb|EAW49615.1| STE20-like kinase (yeast), isoform CRA_a [Homo sapiens] gi|119570003|gb|EAW49618.1| STE20-like kinase (yeast), isoform CRA_a [Homo sapiens] Length = 1235 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 918 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 977 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 978 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1031 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1032 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1071 >gi|332225632|ref|XP_003261987.1| PREDICTED: dystrobrevin alpha isoform 5 [Nomascus leucogenys] Length = 452 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 128 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQRQLIAE 187 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 188 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 247 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 248 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 280 >gi|297687336|ref|XP_002821172.1| PREDICTED: STE20-like serine/threonine-protein kinase-like isoform 1 [Pongo abelii] Length = 1236 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 919 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 979 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072 >gi|291409887|ref|XP_002721232.1| PREDICTED: coiled-coil domain containing 157-like [Oryctolagus cuniculus] Length = 704 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 26/198 (13%), Positives = 70/198 (35%), Gaps = 8/198 (4%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 L A T A + + L + + +L + + + +Q L Sbjct: 267 LPAATMGHWAAEQSKDLARISKHVGALTQLVGPLRAQLEEAEGQKDRLGTRV-AELEQAL 325 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHILEKQQHI 380 + R + E E L + + + ++K L +++ ++ + Sbjct: 326 RQEQERGRQQAEEAEQRLAAWEDNRQQLLAETSDLKMKVAALEGELKQQQESTQAVEAKA 385 Query: 381 EQIVKQHLRYIFLEKK-----EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +Q++++ E++ E++ +L + + +I + T + K R++ ++ H+ Sbjct: 386 QQMLEEREHRAAAERQVQRLEEQVQLLAAQLDGARQQIHWASTELDKEKARVDSMVRHQ- 444 Query: 436 KSCHTSVSITTRILQSFA 453 +S + L S Sbjct: 445 ESLQAKQRALLQQLDSLD 462 >gi|260768669|ref|ZP_05877603.1| GGDEF family protein [Vibrio furnissii CIP 102972] gi|260616699|gb|EEX41884.1| GGDEF family protein [Vibrio furnissii CIP 102972] Length = 382 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 21/164 (12%), Positives = 57/164 (34%), Gaps = 3/164 (1%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 + R ++ L++ + ++ LS + R +++ + Sbjct: 46 RMALFELSRYAEFHFKEEEQLMRDVGIAEAHLSEHI-DVHRTFMSEIFSMQAFLSESDER 104 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + +L ++I Q++ + + IEQ + Y E++++ + L Sbjct: 105 PAVQLLEFLIHWLAYHILGIDQNMARQVKAIEQGLSAQHAY-EQEERQRDSATEPLLNAL 163 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + ++LI R+ L K+ + R L++ + Sbjct: 164 NGLFEQVSERNRELI-RVNQSLEEKVHERTQQLMQANRQLEALS 206 >gi|183601022|ref|ZP_02962515.1| hypothetical protein PROSTU_04643 [Providencia stuartii ATCC 25827] gi|188019360|gb|EDU57400.1| hypothetical protein PROSTU_04643 [Providencia stuartii ATCC 25827] Length = 1225 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 10/155 (6%), Positives = 41/155 (26%), Gaps = 6/155 (3%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + + + L + R + E + +I ++ + + Sbjct: 180 EIYSQISSYIYRQHKQVKNDLEILKARAQSIHLLTESEHQALIEQQTVLADQERQLNQKR 239 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 +Q + + Q+ + + + + + L + Sbjct: 240 TQNQQALYWQQRQQQLTARLHQLELDQQQAEKAYQDAEPQFKKLSDNLPAENLRPLWQDV 299 Query: 421 KKLITRI------EFILSHKIKSCHTSVSITTRIL 449 ++ + + LS + ++ ++ L Sbjct: 300 ERQQQALNELLEKQQSLSQQCENNTQQLTPLQAQL 334 >gi|114675004|ref|XP_001145436.1| PREDICTED: rho guanine nucleotide exchange factor 18, partial [Pan troglodytes] Length = 782 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 7/154 (4%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 L L + +++ I+ L +L + + D + R RE + L+ Sbjct: 400 RLSTVLESELVQRIQTLSQLLLNLQAVIAHQDSYVET--QRAAIQEREKQFRLQSTRGNL 457 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 N K ++K + + ++QQ E+ + + + L ++ Sbjct: 458 LLEQERQRNFEKQREERAALEKLQSQLRQEQQRWERERQWQHQELEL-AGARLQEREGEA 516 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 Q + R+ + R H ++ Sbjct: 517 RQLRERLEQERAEL----ERQRQAYQHDLERLRE 546 >gi|114632691|ref|XP_508017.2| PREDICTED: STE20-like kinase isoform 5 [Pan troglodytes] Length = 1236 Score = 38.2 bits (87), Expect = 3.3, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 919 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 978 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 979 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1032 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1033 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1072 >gi|333010611|gb|EGK30044.1| hypothetical protein SFVA6_0407 [Shigella flexneri VA-6] Length = 615 Score = 38.2 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 18/188 (9%), Positives = 50/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P Sbjct: 428 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 487 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372 Q +R R+ E + + + + RI+S +K +Q Sbjct: 488 QRREAARQRIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 547 Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 L +QQ ++I + +++ + + + + + R+ Sbjct: 548 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSTVRERLSE 607 Query: 430 ILSHKIKS 437 + +++ Sbjct: 608 RGARRLER 615 >gi|295695654|ref|YP_003588892.1| DNA polymerase III, alpha subunit [Bacillus tusciae DSM 2912] gi|295411256|gb|ADG05748.1| DNA polymerase III, alpha subunit [Bacillus tusciae DSM 2912] Length = 1022 Score = 38.2 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Query: 53 AYFSLKDNHSRIDAIIWKGTLNKIE---FLPEEGIEFLVIGKITTFPGSSKYQIIIESLI 109 +FSL+D +DA++++ + F P + I V G + Q++++ + Sbjct: 963 VFFSLEDETGIVDAVMFEKEYRRSGGDLFRP-DAIALGVHGTVE--RRRGHLQLVVDRVR 1019 >gi|168047899|ref|XP_001776406.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672250|gb|EDQ58790.1| predicted protein [Physcomitrella patens subsp. patens] Length = 676 Score = 38.2 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 25/250 (10%), Positives = 71/250 (28%), Gaps = 21/250 (8%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + +I ++ L N + + R +E + Sbjct: 105 RERRQRIGNSKAMIERKLWQPKPCKHWSIKLINLMEAIFQELLREFERQYYQLSKVEKLT 164 Query: 344 FRKYRH---FNHIINRIKSDF-LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + ++K L ++ + + K +++E + + + + I Sbjct: 165 LEPNKVDLFLQAADRKLKGKLELFLKDKEEDEGLTTKWKNVENAMGLLTKRERKKDRSNI 224 Query: 400 AILHMLREQTKNRIFYLHTHIKK---LITRIEFILSHKIKSCHT---SVSITTRILQSFA 453 + ++ L + + + I+ ++ + Sbjct: 225 PKTIQAPKAPIRTTRPTMPTVQPSTSLSKKADIGMEEIIQGMRDLQIKLARLEENTSTNN 284 Query: 454 YKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKC 512 KN LK+GY + + + +L + NF G+ A+V + + ++ Sbjct: 285 SKNVLKQGY-----KDGKIALRDREDL-----LQTNFGKGRMRALVQDYLKEHKIAARES 334 Query: 513 QLHNNKREKQ 522 H + + Sbjct: 335 ASHGARVDDD 344 >gi|114319988|ref|YP_741671.1| hypothetical protein Mlg_0827 [Alkalilimnicola ehrlichii MLHE-1] gi|114226382|gb|ABI56181.1| conserved hypothetical protein [Alkalilimnicola ehrlichii MLHE-1] Length = 1137 Score = 38.2 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 13/177 (7%), Positives = 50/177 (28%), Gaps = 7/177 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 P+ + RL+ + + + ++ + + + Sbjct: 457 PLPAPEVWEEAAVRQRLDELEQAWHQARSLQQRRQEADQLHAQRGRARTEQAEAEQALHR 516 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ-QHIEQIVKQHLRYIFLE 394 + F+ + + Q ++ +L++Q Q ++ + ++ Sbjct: 517 HAAALGLDAELPLAFDRAVRLLSRHQEAREQQAAQEAVLDRQAQELDTLRDTLHHFLATW 576 Query: 395 ----KKEKIAILHMLREQTKNRIFYLHTHIKKLIT--RIEFILSHKIKSCHTSVSIT 445 ++E+ L + + R ++ R+ L +++ + Sbjct: 577 HTAPREERSEALGAALDDLRQRCEAAERARQQADNATRLIRELERQLRDTRRQLDQL 633 >gi|195972857|ref|NP_001124427.1| rho guanine nucleotide exchange factor 18 isoform b [Homo sapiens] gi|296439444|sp|Q6ZSZ5|ARHGI_HUMAN RecName: Full=Rho guanine nucleotide exchange factor 18; AltName: Full=114 kDa Rho-specific guanine nucleotide exchange factor; Short=p114-Rho-GEF; Short=p114RhoGEF; AltName: Full=Septin-associated RhoGEF; Short=SA-RhoGEF Length = 1173 Score = 38.2 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%) Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + +L + L N ++ R RE + L+ N K Sbjct: 802 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 861 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++K + + +QQ E+ + + + ++ Q + R+ Sbjct: 862 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 920 Query: 420 IKKLITRIEFILSHKIKSCHT 440 + R H ++ Sbjct: 921 L----ERQRQAYQHDLERLRE 937 >gi|221632119|ref|YP_002521340.1| ATP-dependent DNA helicase RecG [Thermomicrobium roseum DSM 5159] gi|221156495|gb|ACM05622.1| ATP-dependent DNA helicase RecG [Thermomicrobium roseum DSM 5159] Length = 807 Score = 38.2 bits (87), Expect = 3.4, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 9/68 (13%) Query: 37 VRGEISGYRGIHSS-GHAYFS--LKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKIT 93 V GE+ +S G Y S L+D I I + I E G V G++ Sbjct: 182 VIGEVVQIETRETSGGRRYVSVQLRDETGTIPVIWF---NPYIARQLEAGQRIAVSGRL- 237 Query: 94 TFPGSSKY 101 G Y Sbjct: 238 --EGHGPY 243 >gi|301118911|ref|XP_002907183.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262105695|gb|EEY63747.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 2213 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 7/175 (4%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 EH ++S+ LE+ + +RL + + ++ R +L +L Sbjct: 1360 EIEHWKASVHQLESDKRGLELRLQEVMRQATDQFETQKHSAAMATEDGRTQLQKLTA--- 1416 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 ++ R + + ++ ++++ + + + ++ Q + + Sbjct: 1417 ----QLVQRDAQMTEGHQQLRRMQEMVRSLEEKLRTQQYESESLQMKNDQLNGQLDALRN 1472 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 EK + H++R T L + + + R+ + +++ + +L S Sbjct: 1473 EKRGLEHVMRRHTSTLRDGLEEDLSQRLERLARDMERRVQEESEKTAQLQSVLDS 1527 >gi|208019305|emb|CAQ14332.1| finTRIM family protein [Danio rerio] Length = 498 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 21/187 (11%), Positives = 48/187 (25%), Gaps = 5/187 (2%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 V + + Q+ L E LI + + + + R Sbjct: 46 KSCLVCLNSYCQNHLEQHENLFKGKRHNLIDATGRLQEMICRKHDKLLEIYCRTDQRCIC 105 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + ++ + + ++ Q+ Q K Q + + VK H R Sbjct: 106 MLCMVDEHKDHETVSTSAERTEKQKQLGEI--QRKFQQQIQKRERKLQELNEAVKIHERS 163 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT---R 447 K+ + L + + + I+ +K + Sbjct: 164 AQTAVKDSERVFSELIRSIERKRSEVTQMIRDQEKITVGRAEGLLKQLQQEIDDLRGKNA 223 Query: 448 ILQSFAY 454 L+ +Y Sbjct: 224 KLEQLSY 230 >gi|195437272|ref|XP_002066564.1| GK24496 [Drosophila willistoni] gi|194162649|gb|EDW77550.1| GK24496 [Drosophila willistoni] Length = 7988 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 21/211 (9%), Positives = 57/211 (27%), Gaps = 21/211 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + +L + + Sbjct: 7304 HFNIQKLSHAIGNVQSQSSELTLVNQQAQSLIRQADSRNRQLIEQDNANLNRLWQELIRG 7363 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + + E + + + ++ ++ I +++ + Q + Sbjct: 7364 LEQRRDNLQQLAEHWD-SFENSLHAWEKSLGRLEDKFRNVDPIVRSRRHLEDTKNAIQEL 7422 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7423 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLREKEQQ 7482 Query: 433 ------------HKIKSCHTSVSITTRILQS 451 +I ++ LQS Sbjct: 7483 VSKDLDEIEQVFRRISQLQDKLNSLNEQLQS 7513 >gi|118366791|ref|XP_001016611.1| hypothetical protein TTHERM_00189350 [Tetrahymena thermophila] gi|89298378|gb|EAR96366.1| hypothetical protein TTHERM_00189350 [Tetrahymena thermophila SB210] Length = 1238 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 15/172 (8%), Positives = 56/172 (32%), Gaps = 4/172 (2%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + E++ + + I + ++ + + + + ++L ++ I Sbjct: 519 NSFESQQKWNQNQGNQSPIYQQSPQQNSIQSPKEIFPINSLQFNQLKQKPSQYPPISAVN 578 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + ++K + +L +Q ++ K+ + + K++ Sbjct: 579 PVQKLYENSQKLK----EAQQNSQNEDLLNLRQELQNQTKKIQQDLQKMKEDMSNQQKET 634 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 ++ N + I I +IE + +++ ++ + Q + Sbjct: 635 DKKQLNALQSQERLIVNEIAKIENQIKQQLEDQKKALQQQQQQQQQLSPSKI 686 >gi|16329814|ref|NP_440542.1| DNA ligase [Synechocystis sp. PCC 6803] gi|1652299|dbj|BAA17222.1| DNA ligase [Synechocystis sp. PCC 6803] Length = 562 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 20/269 (7%), Positives = 71/269 (26%), Gaps = 31/269 (11%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 +H + ++++ + +L + + +L L + ++ +R +L +L + N Sbjct: 116 QHQLAHYDDIQSEKFVGLQKLNQELLQENTNLSDRLKQAVNEVAETRPKLVQLNSLVTRN 175 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 ++ Y N + + + R + Q + + + ++++ Sbjct: 176 QQLSDQLSYVEQNQAKAIEQRLASQEKLWQQRHEQEQAQWNSQASQWEEQVRQLTAERDQ 235 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH------KIKSCHTSVSITTRILQSF 452 + Q +++ + R+ ++ + + + L Sbjct: 236 VQQELQTARQQSQSAQTQAENLQAALDRLGQQEEQWQGERSQLTAKLNQLEEAQKELALA 295 Query: 453 A-YKNT-LKRGYTSIQDTNNNFITQ-----KRNLATKTRILINF-------------FDG 492 L+ + + L + + G Sbjct: 296 NAELKVKLE-----TTQAEGDRLKTEKKEQAAALQSAQGQVTQLQQELAALQENLAKAKG 350 Query: 493 QANAIVINKAPPKEQPTKKCQLHNNKREK 521 + + V K + + Sbjct: 351 EPPSEVPEKTKAVATAPAQEAPVVSPSPP 379 >gi|297474366|ref|XP_002687237.1| PREDICTED: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2-like, partial [Bos taurus] gi|296487994|gb|DAA30107.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2-like [Bos taurus] Length = 880 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 37/354 (10%), Positives = 95/354 (26%), Gaps = 25/354 (7%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 164 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIV--ALRE 221 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 + + V +G + + ++ + D +++L + Sbjct: 222 QNVHIQRKMVSSEGSTESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQN 281 Query: 230 EMIVRAIANSSIPIISAIG---HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + + + S +G E + D T ++ I Sbjct: 282 YEMAQMKERLA-ALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERI 340 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + R + + L L N + L + +L LE + + Sbjct: 341 TTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTM 400 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHML 405 + + E Q I + K R+ E+ + Sbjct: 401 -----------------RKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEE 443 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + Q R ++ R+ + + + + + + KN L Sbjct: 444 KNQELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 497 >gi|161055|gb|AAA29914.1| paramyosin [Schistosoma mansoni] Length = 439 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 20/180 (11%), Positives = 52/180 (28%), Gaps = 5/180 (2%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD----QTLSCSRYRLDRLP 332 E + + L L + L + +T+ + + Sbjct: 160 DAEEALHDMDQKYQASQAALNHLKSEMEQRLRERDEELESLRKSTTRTIEELTVTITEME 219 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 + + L + R + + ++ + + L ++ + R + Sbjct: 220 VKYKSELSRLKKRYESNIADLEIQLDTANKANANLMKENKNLSQRVKDLETFLDEERRLR 279 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + I R Q N I + + ++ L R+ +++ + VS T L Sbjct: 280 EAAENNLQITEHKRLQLANEIEEIRSTLENL-ERLRKHAETELEEAQSRVSELTIQLNIL 338 >gi|73998474|ref|XP_863878.1| PREDICTED: similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) isoform 5 [Canis familiaris] Length = 951 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 634 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGALKK 693 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 694 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 747 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 748 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 787 >gi|319651827|ref|ZP_08005952.1| DNA polymerase III subunit alpha [Bacillus sp. 2_A_57_CT2] gi|317396479|gb|EFV77192.1| DNA polymerase III subunit alpha [Bacillus sp. 2_A_57_CT2] Length = 923 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 7/87 (8%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R A+ SL D ++A+++ N+ +G G+I Sbjct: 769 EVKKIRTKKGEPMAFLSLSDQTGDMEAVVFPKVFNRFSMQCSQGSIVFAEGRIE--ERDG 826 Query: 100 KYQIIIESLIPSGSGTLLTALEKRKKK 126 K Q+I++ L + A+EK + K Sbjct: 827 KKQLIVQHLD-----DVKEAIEKMQNK 848 >gi|297296250|ref|XP_001105580.2| PREDICTED: stAR-related lipid transfer protein 9 [Macaca mulatta] Length = 4520 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 17/197 (8%), Positives = 52/197 (26%), Gaps = 9/197 (4%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D DL A + + + + + + + + ++ L Sbjct: 428 LDLDGDLTASRLGLFPLLWKEGRALEEQCDEDRQPPRDGETSHRAQIQQQQS--YVEDLR 485 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + Q L+ L + + I + + S + LE Sbjct: 486 H--QILAEEIQAEKELEFDQSWISQQIKENQQCLLRE-ETWLASLQQQQQEDHVAEKELE 542 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 ++ ++ + + L+ ++ + +++ ++ F L I Sbjct: 543 ASVALDAWLQTDPEIQPSPFVQSQKRVVQLQLLRRHTLRAAERNVR--RKKVSFQLERII 600 Query: 436 KSCHTSVSITTRILQSF 452 + + L+ Sbjct: 601 --KKQRLLEAQKRLEQL 615 >gi|195145856|ref|XP_002013906.1| GL23139 [Drosophila persimilis] gi|194102849|gb|EDW24892.1| GL23139 [Drosophila persimilis] Length = 817 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 10/187 (5%), Positives = 40/187 (21%), Gaps = 4/187 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 P + +P Q ++ + + L + LK + Sbjct: 535 HAATKMPPLPTAIPIPTTPRTQHQHSSVNTPKDAAMEELSTFAQLKAYVELKTESKPEHL 594 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L L + ++ + + L + + Q Sbjct: 595 LDQRLEGQQTLSSSHPGAMLLLACVLVVVLLAGLAHVYRCELPWQRRGRPGQMRPHHQRQ 654 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 ++ + + + + + + + + +++ Sbjct: 655 FNESDDAHSFLNYQGSAGSTADPARLQ----KWHHSTRREAPYSSPLHNLQARELQREQN 710 Query: 441 SVSITTR 447 + + Sbjct: 711 RLQRCQQ 717 >gi|163848943|ref|YP_001636987.1| hypothetical protein Caur_3413 [Chloroflexus aurantiacus J-10-fl] gi|222526896|ref|YP_002571367.1| hypothetical protein Chy400_3674 [Chloroflexus sp. Y-400-fl] gi|163670232|gb|ABY36598.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl] gi|222450775|gb|ACM55041.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl] Length = 556 Score = 38.2 bits (87), Expect = 3.5, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 30/100 (30%), Gaps = 6/100 (6%) Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 I++ Q + ++ + ++ + L +R L I + Sbjct: 179 MIEEVNQQLAALEEELANRQDLTPEQREELQQILRQLQEELARNPGDRQEAL-ADIAQAE 237 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFA-----YKNTLK 459 R+ L + ++ R L+ + + TL Sbjct: 238 MRLRQQLDPQTDLRQAALEQLARRLEQLSNDQTTPRPTLD 277 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 10/122 (8%), Positives = 43/122 (35%), Gaps = 3/122 (2%) Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN--IQKNRQHILEKQQHIEQIVKQHLRY 390 + + + N + ++ + + R+ + + + +++ + ++ Sbjct: 166 MDRILAEQAAVAEMIEEVNQQLAALEEELANRQDLTPEQREELQQILRQLQEELARNPGD 225 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + LR+Q + +++L R+E + + + + ++ + L+ Sbjct: 226 RQEALADIAQAEMRLRQQLDPQTDLRQAALEQLARRLEQLSNDQ-TTPRPTLDQLRQQLE 284 Query: 451 SF 452 S Sbjct: 285 SL 286 >gi|323526496|ref|YP_004228649.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1001] gi|323383498|gb|ADX55589.1| chromosome segregation protein SMC [Burkholderia sp. CCGE1001] Length = 1172 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 49/384 (12%), Positives = 112/384 (29%), Gaps = 22/384 (5%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139 PE G + G + T Q+ +G +E +++ + L +D+ K Sbjct: 629 PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685 Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF---PVKVQGDECPKEIANAILQ 196 V + + L++ + + + +I + + Sbjct: 686 AAIRAEAAHTQAAQALTDVRQQAERATQRVHALQLDVLKLTQAHERYTQRSTQIREELEE 745 Query: 197 LNTLKEGRTCPRPDI-IILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWT 254 ++ E + R + R G + +L F D + + ++ + D Sbjct: 746 IHAQVEEQRALRAESEANFERYDGELAELQARFEDHQLAFEALDEALTTARGESRDLDRA 805 Query: 255 LAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 D +AA A E + +LE + + L L Sbjct: 806 ATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDALD 865 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 ++ L +R LD L +L E + + ++ +++ Sbjct: 866 IRAVKEEALHAARLELDDLTAKLRAADETRLST-----ERALQPLRDRINELQLKEQAAR 920 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRIE 428 + +Q IEQ+ + L+ K + + RI + + ++ Sbjct: 921 LNG-EQFIEQLAAAGVDEAELQAKLTPDMKPSYLQGEVTRINNAIIALGPVNMAALDELK 979 Query: 429 FILSHK--IKSCHTSVSITTRILQ 450 K + S ++ L+ Sbjct: 980 AATERKTFLDSQSADLTSAIETLE 1003 >gi|254414886|ref|ZP_05028650.1| hypothetical protein MC7420_1171 [Microcoleus chthonoplastes PCC 7420] gi|196178375|gb|EDX73375.1| hypothetical protein MC7420_1171 [Microcoleus chthonoplastes PCC 7420] Length = 292 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 9/142 (6%) Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 L +RY L +L E + + + + + + + ++ +L + Sbjct: 159 HRLQNNRYVLQQLTAEGRYWIPELELFLGIWYGTRLGLTSNW--LRWWDESGNLLLWSSE 216 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 EQ R +++++ EQ + R ++ R + +++ ++ Sbjct: 217 QAEQ-----ERQRAEQERQRAEQERQRAEQERQRAEQERQRAEQERQRAD-AVTNNLEQE 270 Query: 439 HTSVSITTRILQSFAYK-NTLK 459 LQ NTL Sbjct: 271 RQRNQALIAKLQELGIDPNTLS 292 >gi|34533778|dbj|BAC86801.1| unnamed protein product [Homo sapiens] Length = 1173 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%) Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + +L + L N ++ R RE + L+ N K Sbjct: 802 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 861 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++K + + +QQ E+ + + + ++ Q + R+ Sbjct: 862 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 920 Query: 420 IKKLITRIEFILSHKIKSCHT 440 + R H ++ Sbjct: 921 L----ERQRQAYQHDLERLRE 937 >gi|326772158|ref|ZP_08231443.1| trypsin domain-containing protein [Actinomyces viscosus C505] gi|326638291|gb|EGE39192.1| trypsin domain-containing protein [Actinomyces viscosus C505] Length = 622 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506 I D + IT +A ++I + DG+ +A P + Sbjct: 340 VIFDKEGHIITNNHVVAGASKIQVTLADGRVYDAETTGTDPATD 383 >gi|325184393|emb|CCA18884.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1013 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 17/181 (9%), Positives = 51/181 (28%), Gaps = 9/181 (4%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-DRLPR 333 + + + + L + I + K + L R L Sbjct: 151 MENRVNELEHEVELRDQREKEIQHQYQVKRMEFLQGQEQWKAQMDDLERQYDRTIQELED 210 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN--IQKNRQHILEKQQHIEQIVKQHLRYI 391 +L+ + + + + + + + + IE + ++ + Y+ Sbjct: 211 ANAKSLQQMQTIEQLRVESAQDTRARVDMECKAVTEHWQAQLKPLRNEIESLSQEKINYM 270 Query: 392 FLEKKEKIAILHMLRE--QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 ++ H L + K +I T ++ ++ ++ +S L Sbjct: 271 NERQRLVAENQHRLMQSENEKQQIQDQFTKLQYEY----QHVTRDLEQAKHRLSSLENAL 326 Query: 450 Q 450 + Sbjct: 327 K 327 >gi|325067522|ref|ZP_08126195.1| 2-alkenal reductase [Actinomyces oris K20] Length = 365 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506 I D + IT +A ++I + DG+ +A P + Sbjct: 83 VIFDKEGHIITNNHVVAGASKIQVTLADGRVYDAETTGTDPATD 126 >gi|195472759|ref|XP_002088666.1| GE11346 [Drosophila yakuba] gi|194174767|gb|EDW88378.1| GE11346 [Drosophila yakuba] Length = 8015 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 57/212 (26%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + L ++ + ++ Sbjct: 7331 HFNIQKLSHAIGNVQSQNSDLTLVNQQAQSLIRQADARNRQLIEQDNAGLNRSWQDLVRS 7390 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 7391 LEQRRDNLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7449 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7450 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7509 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7510 VSKDLEEIEQVFRRISQLQDKLNALHDQLQSV 7541 >gi|119493201|ref|ZP_01624076.1| Methyltransferase FkbM [Lyngbya sp. PCC 8106] gi|119452766|gb|EAW33943.1| Methyltransferase FkbM [Lyngbya sp. PCC 8106] Length = 800 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 19/176 (10%), Positives = 52/176 (29%), Gaps = 2/176 (1%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD-RLPRE 334 ++ Q + LE + + + + + + + + Sbjct: 492 QLQSDYQHNQAELEQTHSQLHQSQTELEQLKIQHNQIIEEWEKSKIQVQTVHKELETSQT 551 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L+ + + H + +++ + + + + Q Q Q L+ E Sbjct: 552 HSQKLQTELEQSQTHSQQLQTQLEESQVQSQQLQTQLKDSQTQLKDSQTHSQQLQTQLEE 611 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + L EQ++ L T +++ T L +++ T L+ Sbjct: 612 SQTHSQQLQTELEQSQTHSQQLQTQLEESQTH-SQQLQTELEQSQTHSQQLQTQLE 666 >gi|308161701|gb|EFO64138.1| Liver stage antigen-like protein [Giardia lamblia P15] Length = 1810 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 24/202 (11%), Positives = 68/202 (33%), Gaps = 22/202 (10%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY---RLDRLPR 333 + + +++E R+ + +L K + L +Q L+ + + +RL Sbjct: 1204 STDPFSYASLDIERRIKEMKAQLEKEMAEKIALEHADLNALEQELAAKKLSTLQAERLLN 1263 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + + + + R FN ++ + + L+ Q + Q + +Q Sbjct: 1264 TVASDTVARLDDEDRLFNESMDAKRQELLLLKEQYGLMRHQNESQRALHLEEQVKAEKLA 1323 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI-------------------EFILSHK 434 E++A L + + + +I + K +++ L + Sbjct: 1324 RLIEQVAELAEKKHKLERKIAHESKEFHKKESKLVASNSKGALKALRKEHAKEHEALETQ 1383 Query: 435 IKSCHTSVSITTRILQSFAYKN 456 + S + + L++ + + Sbjct: 1384 LASISEQLRKAKKQLKALSPQK 1405 >gi|297578815|ref|ZP_06940743.1| GGDEF family protein [Vibrio cholerae RC385] gi|297536409|gb|EFH75242.1| GGDEF family protein [Vibrio cholerae RC385] Length = 372 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 53/186 (28%), Gaps = 8/186 (4%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 +E+ LQ L + + + AL + ++ + R Sbjct: 29 NRYSELLSENHVSLQEIRTALFELSRYAEYHFKEEEQLMREVGISAL-HLEEHIQVHRTF 87 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + + ++ + +I+ + L + RQ I + Sbjct: 88 MSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA------IRSGMSA 141 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 E++EK A L + ++L+ + L K+ + R Sbjct: 142 EEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTQQLYQVNR 200 Query: 448 ILQSFA 453 L++ + Sbjct: 201 QLEALS 206 >gi|301756234|ref|XP_002913949.1| PREDICTED: STE20-like serine/threonine-protein kinase-like [Ailuropoda melanoleuca] gi|281352089|gb|EFB27673.1| hypothetical protein PANDA_001804 [Ailuropoda melanoleuca] Length = 1242 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 925 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 984 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 985 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 1038 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 1039 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 1078 >gi|117926781|ref|YP_867398.1| diguanylate cyclase [Magnetococcus sp. MC-1] gi|117610537|gb|ABK45992.1| diguanylate cyclase [Magnetococcus sp. MC-1] Length = 442 Score = 38.2 bits (87), Expect = 3.6, Method: Composition-based stats. Identities = 24/200 (12%), Positives = 60/200 (30%), Gaps = 9/200 (4%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 + R T + + L + I + + TL L K Sbjct: 64 SHERQAQLTRLQKELSKQRVPDLEKLNGDLQTITPWITQPPDWDRQTLAELDKPPAAFRT 123 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNIQKNRQHIL 374 L + + L L +L+ ++ + + N + + + +L Sbjct: 124 HLLNALHLLGEADPWLTEHLQHFPPQQEPTWKQLYNLLTELPNQELKRERRWNRQKADLL 183 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN----RIFYLHTHIKKLITRIEFI 430 + Q + + + Q L+ + E +L L++ + + + L R Sbjct: 184 QTLQRLAESLSQGLKDLGQAGGESETMLARLQQSPETVDLLELKQVLIQEADLFRRYAKR 243 Query: 431 LSHKIKSCHTSVSITTRILQ 450 + H+++ + L+ Sbjct: 244 VHHQLEQSSDRLQQAHNRLK 263 >gi|332022061|gb|EGI62386.1| hypothetical protein G5I_09272 [Acromyrmex echinatior] Length = 1500 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 58/210 (27%), Gaps = 8/210 (3%) Query: 248 GHETD-WTLAD-YAADLRAPTPT-GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKI 304 GHE T+AD AD E+ + + + + Sbjct: 842 GHEGLGKTMADRLLADRYDNNRAFREQEIRLQEHRMAAMQAAEHRLAVAAAVQQHHHRDR 901 Query: 305 NTLNSLLKALPNSDQTLS---CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 + L+ + L + RL +H+ + + + + R K Sbjct: 902 DRERDLVHLREKEEHRLHREKELQQLEHRLA-VQQHHQQREKDLQQQEHRLVQQREKDMH 960 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR-IFYLHTHI 420 + H +Q + QH ++ R + +K A E + Sbjct: 961 VEHARLSVQQAREKDIQHEHRLSVHQQREKEIHQKMVAAAAQREIEHEHRLAVQQQQQRE 1020 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQ 450 K++ + + K +++ R Sbjct: 1021 KEMQQQERLAIQQHEKDVERRLAMQHRERD 1050 >gi|320105836|ref|YP_004181426.1| metal dependent phosphohydrolase [Terriglobus saanensis SP1PR4] gi|319924357|gb|ADV81432.1| metal dependent phosphohydrolase [Terriglobus saanensis SP1PR4] Length = 327 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 5/90 (5%) Query: 45 RGIHSSGHAYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQ 102 R G Y +L D +A +W+ + + G V G+I + +YQ Sbjct: 29 RDKKGGGGQYLALTLADKTGSFEARMWEDFADALNTC-SSGCYVKVQGRIDKY--QGRYQ 85 Query: 103 IIIESLIPSGSGTLLTALEKRKKKLLEEGL 132 I + + + + TA + + L Sbjct: 86 ITLSKMRSAAESEIDTADFQPTTQYDIAAL 115 >gi|229525824|ref|ZP_04415229.1| GGDEF family protein [Vibrio cholerae bv. albensis VL426] gi|229339405|gb|EEO04422.1| GGDEF family protein [Vibrio cholerae bv. albensis VL426] Length = 372 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 53/186 (28%), Gaps = 8/186 (4%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 +E+ LQ L + + + AL + ++ + R Sbjct: 29 NRYSELLSENHVSLQEIRTALFELSRYAEYHFKEEEQLMREVGISAL-HLEEHIQVHRTF 87 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 + + ++ + +I+ + L + RQ I + Sbjct: 88 MSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA------IRSGMSA 141 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 E++EK A L + ++L+ + L K+ + R Sbjct: 142 EEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKVIERTQQLYQVNR 200 Query: 448 ILQSFA 453 L++ + Sbjct: 201 QLEALS 206 >gi|322373155|ref|ZP_08047691.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150] gi|321278197|gb|EFX55266.1| putative RecF/RecN/SMC N domain protein [Streptococcus sp. C150] Length = 1177 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 23/211 (10%), Positives = 63/211 (29%), Gaps = 20/211 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 NL+ + + L + + + + + + + L ++ E L+ + Sbjct: 761 NLQDKAERLKAELTQMQSKREAINDRIEAIKEDKDTLGQQKQGLLDKQSELQLKERDLQA 820 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI---LH 403 F L ++++ + ++Q L ++ ++ E I L Sbjct: 821 ELRFAKTETNRLKADLSELMKESESLLALLNNQVDQNQSDRLPHLLAQRDEAIQRKDDLE 880 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRIL-QSF-------- 452 + K ++ ++ L R+ + + T + R + QS Sbjct: 881 QSLVRAKIQVQDYEGQLEDLEERLAKAGNRNEDLIRQQTRLEEGERQISQSLRKFATQLA 940 Query: 453 -AYKNTLKRGYTSIQDTNNNFITQKRNLATK 482 Y+ TL+ + + + Sbjct: 941 EDYQMTLE-----VAKGQTQVLVNVEQVRQN 966 >gi|320197727|gb|EFW72335.1| Phage tail length tape-measure protein 1 [Escherichia coli EC4100B] Length = 911 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 20/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A ++Q + R + L Sbjct: 392 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAEQNYQEQQKRRNAENAALN 451 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I + +D + + R++ ++ + K+ E Sbjct: 452 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 510 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 511 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 569 Query: 457 TLKR 460 L R Sbjct: 570 VLAR 573 >gi|312877418|ref|ZP_07737382.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795807|gb|EFR12172.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus 6A] Length = 212 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 4/57 (7%), Positives = 24/57 (42%), Gaps = 1/57 (1%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 K+++ + ++ + R+ + + + R++ + ++ + + + L + Sbjct: 26 KQRLDRVEERLDRVEERLDRVEKRLDAVEQRLD-AVEQRLDAVEQRLDAVEQRLDTL 81 >gi|301627401|ref|XP_002942860.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Xenopus (Silurana) tropicalis] Length = 513 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 19/204 (9%), Positives = 54/204 (26%), Gaps = 10/204 (4%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 D P + ++ + ++ + + L + + Sbjct: 95 CDSPVPAAKSCLHCEASLCDYHVREHSRAAEHVLTDPTASFGHRKCSEHMELLRY-HCTE 153 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-QHILEKQQ 378 +C + EH +E + + + N + L + R Q + E + Sbjct: 154 DGACICATGLQSGEHKEHKVETVNEASKKKKEKLWNILLQLSLSRREAEIRAQRLQECSR 213 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + Q + + L L ++ I + + + + +++ Sbjct: 214 DVAQKAADETERVTALFRVIGERLEALEKRLLRDISWEQEKVSLQLNDLIQ----QLEIK 269 Query: 439 HTSVSITTRILQSF----AYKNTL 458 +S R ++ L Sbjct: 270 KDELSGKIRHIEELCNMGDPLTVL 293 >gi|90660382|gb|ABD97496.1| cowpox A-type inclusion protein [Cowpox virus] Length = 1276 Score = 38.2 bits (87), Expect = 3.7, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 53/171 (30%), Gaps = 23/171 (13%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419 L + + R + E ++ + R + ++ R ++ +NRI YL Sbjct: 681 LERQLSECRGNTTEIS-RLQSRISDLERQLNDCRRNNENNADTEREMQRLRNRITYLERQ 739 Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + E + +++ + R L KR + N T Sbjct: 740 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------NGNG---TSSE 784 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + R+ D + + + +K + K +L + + Q L Sbjct: 785 EVN---RLKTRIRDLERSLEICSKDESELYSAYKSELGRAREQISNLQESL 832 >gi|261211055|ref|ZP_05925345.1| GGDEF family protein [Vibrio sp. RC341] gi|260840030|gb|EEX66630.1| GGDEF family protein [Vibrio sp. RC341] Length = 372 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 42/139 (30%), Gaps = 7/139 (5%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 75 RHLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA 134 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + E++EK A L + ++L+ + L K Sbjct: 135 ------LRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEK 187 Query: 435 IKSCHTSVSITTRILQSFA 453 + + R L++ + Sbjct: 188 VIERTQQLYQVNRQLEALS 206 >gi|148244870|ref|YP_001219564.1| DNA polymerase III alpha subunit [Candidatus Vesicomyosocius okutanii HA] gi|146326697|dbj|BAF61840.1| DNA polymerase III alpha subunit [Candidatus Vesicomyosocius okutanii HA] Length = 1141 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 67/151 (44%), Gaps = 23/151 (15%) Query: 11 DHP--EYSVSELSYHLKHIVESNL-----SHVCVRGEISGYRGIH-SSGH--AYFSLKDN 60 +HP EY+V++L ++ ++ SN+ V V IS R +G A +++D Sbjct: 949 NHPTNEYTVADL-KNINVVLPSNIVFRKNRDVRVLALISDLRYRSIKNGERIALITIEDG 1007 Query: 61 HSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTAL 120 + ++A+++ TL + ++ GKI ++Q+++ + + Sbjct: 1008 SASLNAVVFTKTLTLVSNQLMTDEVVVISGKINK-DFRDQWQLVVNKIE---------NI 1057 Query: 121 EKRKKKLLE--EGLFSDQHKNPIPFIPKIIA 149 E+ K + E L + +H++ + KI+ Sbjct: 1058 EQVKISYAKGFEVLLNTKHQSIFDKLIKILI 1088 >gi|33864877|ref|NP_896436.1| SMC ATPase superfamily chromosome segregation protein [Synechococcus sp. WH 8102] gi|33632400|emb|CAE06856.1| putative chromosome segregation protein, SMC ATPase superfamily [Synechococcus sp. WH 8102] Length = 1203 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 24/229 (10%), Positives = 71/229 (31%), Gaps = 17/229 (7%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + ++ + + + + + ++ + Q L + + L+RL Sbjct: 890 HTSWREQQLQLQQQRSSLQQQQSDLQERFGEQRRARDAAEAEVGRQRQALQQAEWNLERL 949 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE--QIVKQHLR 389 E E +E + + + + Q ++ Q + L Sbjct: 950 KEEREGLIEEQ-RSGAVRLQEMEQALPDPQPEIPEELRLAGLEALQADLQTIQQRMEALE 1008 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-----------SC 438 + + E++ L + R+ L++ ++L+ RIE + + + + Sbjct: 1009 PVNMLALEELEALEQRLAELNERLEVLNSEREELLLRIETVATLRQEAFMEAFTAVDGHF 1068 Query: 439 HTSVSITT---RILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTR 484 + + LQ + L+ G T + + + ++ + Sbjct: 1069 REIFASLSDGDGQLQLENPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEK 1117 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 48/168 (28%), Gaps = 3/168 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + L+ N+L + ++ + SR RL + LE R Sbjct: 352 NRRQDWLHQSRELEQDPHQNSLAAAEATCRGAEAAVEVSRRRLGDVAGRSGAWLEEQKRR 411 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 R + + + R ++ Q +Q ++++ L Sbjct: 412 SGRR-QELQVALAPLLEEQQQLQERLRQDAERLTELQQEQQQDGNDEQAVQQRLEQLEQD 470 Query: 406 REQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451 + + +++ + + +++ T + L+S Sbjct: 471 WQALLQSLSSGKQALQQTADSLAIQQRTRSRLEQEQTRLEREIARLES 518 >gi|296109728|ref|YP_003616677.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus infernus ME] gi|295434542|gb|ADG13713.1| nucleic acid binding OB-fold tRNA/helicase-type [Methanocaldococcus infernus ME] Length = 202 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%) Query: 82 EGIEFLVIGKITTFPGSSKYQIIIESL 108 EG V GK++ + +YQII+ + Sbjct: 102 EGDYVEVKGKVSVY--KGRYQIILRDI 126 >gi|159896636|ref|YP_001542883.1| WD-40 repeat-containing protein [Herpetosiphon aurantiacus ATCC 23779] gi|159889675|gb|ABX02755.1| WD-40 repeat protein [Herpetosiphon aurantiacus ATCC 23779] Length = 1209 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 16/170 (9%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + L+ RL +EL + L I R + + + H + Sbjct: 375 QHEELIFGDVRTILAQQFERLSDQEQELLYWL--AIERHTVKLAELKHDLVRSKYQHMLL 432 Query: 368 KN-----RQHILEKQQ-----HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + R+ ++E+ Q H + R I +E + L + Sbjct: 433 ETLESLLRRSLVERHQDGFMLHNVVLEYTTDRLIDQIAQELLDGTQGLLYRHALIKANSL 492 Query: 418 THIKKLITR--IEFILSHKIKSCHTS--VSITTRILQSFAYKNTLKRGYT 463 I++ +R + +L ++ ++LQ+ + L+ GY Sbjct: 493 DSIREHQSRAILRPLLHRIFVELGQERLLASLRQLLQTMQPLSALEMGYA 542 >gi|89057725|ref|YP_512179.1| lipopolysaccharide biosynthesis [Jannaschia sp. CCS1] gi|88866279|gb|ABD57155.1| lipopolysaccharide biosynthesis [Jannaschia sp. CCS1] Length = 517 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 25/219 (11%), Positives = 73/219 (33%), Gaps = 12/219 (5%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 + S + + ++ + N E + + + Sbjct: 207 NRQALLQERIGSAERERATLQDQRARVIAIFEQTGQINSGNPETLSPEEQQLHAAEAELA 266 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + Q + + + + + + + E + A R T+ + Sbjct: 267 NALTIFSETNPQVQLLQRQVERLREQIAAGIETGQEEGENDDA-----RSSTRTVLDLQL 321 Query: 418 THIKKLITRIEFIL---SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFIT 474 T I IT ++ ++ +++ ++S T + + +L+R Y +I+D + + Sbjct: 322 TQIDTQITALDTLIAETQQELQRLEDAISRTPSNAITLS---SLERNYENIRDQYDQAVA 378 Query: 475 QKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQ 513 + + +T RI + GQ +++ + P+ + Sbjct: 379 RLADASTGERIELT-SRGQRISLIESANVPRSPSSPDRP 416 >gi|332095406|gb|EGJ00429.1| hypothetical protein SB521682_0116 [Shigella boydii 5216-82] Length = 617 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 18/188 (9%), Positives = 50/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P Sbjct: 430 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQLQ 489 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372 Q +R R+ E + + + + RI+S +K +Q Sbjct: 490 QRREAARQRIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 549 Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 L +QQ ++I + +++ + + + + + R+ Sbjct: 550 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 609 Query: 430 ILSHKIKS 437 + +++ Sbjct: 610 RGARRLER 617 >gi|295108759|emb|CBL22712.1| Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Ruminococcus obeum A2-162] Length = 502 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 22/81 (27%), Gaps = 16/81 (19%) Query: 463 TSIQDTNNNFITQKRNL-------ATKTRILINF--FDG----QANAIVI---NKAPPKE 506 + I + + + L + + DG + V NK Sbjct: 391 SIITEFDGKRVRSIDELVSRLEYYEPGEEVEVTLEVADGGEYKEKTVTVTLGENKDTDSN 450 Query: 507 QPTKKCQLHNNKREKQGTQGE 527 + +K + E QG+ Sbjct: 451 KDSKDDSKDESDAEDSQDQGD 471 >gi|260827871|ref|XP_002608887.1| hypothetical protein BRAFLDRAFT_129932 [Branchiostoma floridae] gi|229294241|gb|EEN64897.1| hypothetical protein BRAFLDRAFT_129932 [Branchiostoma floridae] Length = 991 Score = 38.2 bits (87), Expect = 3.8, Method: Composition-based stats. Identities = 16/174 (9%), Positives = 51/174 (29%), Gaps = 3/174 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 ++ Q R + + + + + L+ + R + + + Sbjct: 559 HMKNFQERQDGERERQREQLDAKLAQRRRKMEEQSATSQAEQKMLNDQQERAITMLLDTQ 618 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 L ++ + ++ L + + ++ + +K ++ + EKK Sbjct: 619 AGLTEEARKQIMKEHEQNMIAVNNQLQISRTRQQKILEQKLAQRRAKLEAKTKAKQDEKK 678 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + +Q + + +L R+ +K+ + LQ Sbjct: 679 MLEEEYEEMVQQLE---EERQQALTELRKRLAEETDQALKAQDEQLGKVIARLQ 729 >gi|297690339|ref|XP_002822578.1| PREDICTED: centrosomal protein of 164 kDa-like isoform 2 [Pongo abelii] Length = 1454 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 785 AKHREVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHVAEYEHELSSLL----RE 840 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 841 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 900 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 901 LETVRQEQHKRLEDLRRRHREQERKLQDL 929 >gi|297666364|ref|XP_002811499.1| PREDICTED: forkhead-associated domain-containing protein 1-like [Pongo abelii] Length = 1010 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 71/237 (29%), Gaps = 5/237 (2%) Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 S ++ N E + ++ + + + D L+ P + V Sbjct: 126 SKQEETTENIEKLRTSLDSCQACMKMSCCSHDLKKEVDLLQHLQVSPPVSGLQKVVLDVL 185 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 S + +L + + L L + L L + Sbjct: 186 RHSLSWLEEVEQLLQDLGISRSSPNKGFSLYLINLLEHYKKLMSQAQELQIKFNSSQETQ 245 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIH--NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 + ++ K R ++ + L + + + E++ +E+ + Q +E Sbjct: 246 QSLLQEKLREHLAEKEKLNEERLEQEEKHKAKIRQLTEEKAALEECITQERNRAKETLEE 305 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL---SHKIKSCHTSVSITTRILQS 451 + + L + L I + R++ L +++ ++ +L+S Sbjct: 306 ERKRMQELESLLAQQQKALAESITQEKNRVKEALEVEQTRVQELEKRLARQKEVLES 362 >gi|327289646|ref|XP_003229535.1| PREDICTED: apolipoprotein A-IV-like [Anolis carolinensis] Length = 425 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 19/250 (7%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIII-RLIKYKINTLNSLLKAL 314 AD AD+ + A + + +LN++ L L + + Sbjct: 81 ADQVADVVWSYFSQLGNNAKEAVAGQIPTSTEISQKLNSLFQDNLDTVSAYALELQKQVV 140 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 P ++Q +L +L L+ + R + ++ IQ + + Sbjct: 141 PFAEQLHGRMAEDSQKLKEQLREELDQLRARITPRAEEVRQQM-----TGAIQNLQAQLG 195 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + V R ++ + +R + + + LH + R++ + + Sbjct: 196 PYAEELRSQV---NRNAAELRQGLEPLAEEMRAKLQENVGDLHGALSPYADRLQQRIEAQ 252 Query: 435 IKSCHTSVSITTRILQSFAYKNTLK--R-GYT-SIQDTNNNFITQKR----NLATK-TRI 485 + + ++ L++ A TL+ R G QD Q + + Sbjct: 253 VGTLKAALDPYANKLKAEA-DRTLEELRAGLAPFAQDAQGQLNRQLEGLSFQMQKGIEEL 311 Query: 486 LINFFDGQAN 495 +G + Sbjct: 312 RAKLSEGTLD 321 >gi|320160268|ref|YP_004173492.1| hypothetical protein ANT_08580 [Anaerolinea thermophila UNI-1] gi|319994121|dbj|BAJ62892.1| hypothetical protein ANT_08580 [Anaerolinea thermophila UNI-1] Length = 1423 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 60/221 (27%), Gaps = 20/221 (9%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE-------------ARLNNI 295 HE T++ DL + T + + P L+ + Sbjct: 60 HEDWNTVSAILTDLLSITRSQQIVIIEPDGSIPVRVYTQLDLQPPPLPFIEKSLKNPEWV 119 Query: 296 IIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN 355 + K S + +L + L+ R L + ++ + Sbjct: 120 VWDAEKDIAWIGVSFIPSLSSPPVVLARQVNRSRSLGMLRATHQRNLMLSL---LTSLFI 176 Query: 356 RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 L+ I LE Q R L E + L + Q +RI Sbjct: 177 GAVIYALVRIIGTKPLERLEALTASIQQGDWGKRAPSLPLYE-LDRLGKVFNQMLDRIQI 235 Query: 416 LHTHIKKLITRIEFILSHK---IKSCHTSVSITTRILQSFA 453 H + ++ +E + ++ + + L+S Sbjct: 236 QHEQLTQINQNLELAIQASVASLQEANEQLRHRASQLESLN 276 >gi|149041630|gb|EDL95471.1| rCG58154, isoform CRA_a [Rattus norvegicus] Length = 436 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 16/189 (8%), Positives = 49/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LEA ++ ++ + K + L D R + Sbjct: 29 YLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEE 88 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + + + + + QQ + Q L+ Sbjct: 89 QLIIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 146 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 147 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKDLGQK-DRLLQQQQAKLEDALRKLSDA 205 Query: 453 AYKNT-LKR 460 +Y+ L+R Sbjct: 206 SYQQVDLER 214 >gi|302524167|ref|ZP_07276509.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302433062|gb|EFL04878.1| conserved hypothetical protein [Streptomyces sp. AA4] Length = 364 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 48/153 (31%), Gaps = 5/153 (3%) Query: 307 LNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLE--IIIFRKYRHFNHIINRIKSDFLIH 364 + + L + + + ++ ++ L + + + + +R + L Sbjct: 12 FDRMRNMLVRAAEVRESEQQQIFDALDDIYARLAPVDSLGAVRKRLSELPDRTEVGVLAE 71 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + + + E Q + + + I + + A L + R + + L Sbjct: 72 RLDEAMTRL-ESQDNAIAALTHAVESIVDKLAKPFAQLDGRLDGVAARFEGVAGRMDGLE 130 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNT 457 ++ + ++ + L+S + T Sbjct: 131 DKL-QNIHRRLDELGGHLDKQDAKLESL-PQAT 161 >gi|213691156|ref|YP_002321742.1| single-strand binding protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522617|gb|ACJ51364.1| single-strand binding protein [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457214|dbj|BAJ67835.1| single-strand DNA-binding protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 219 Score = 38.2 bits (87), Expect = 3.9, Method: Composition-based stats. Identities = 6/59 (10%), Positives = 20/59 (33%), Gaps = 3/59 (5%) Query: 59 DNHSR-IDAIIWKGTLNKIEFLPEEGIEFLVIGKIT--TFPGSSKYQIIIESLIPSGSG 114 D + + W+ + ++G+ + G++ ++ Q + + G Sbjct: 49 DGQALFMRCAAWRDLADHCVQSLKKGMRVIATGRLQQRSYQAQDGSQRTVVEMQLDEIG 107 >gi|297690337|ref|XP_002822577.1| PREDICTED: centrosomal protein of 164 kDa-like isoform 1 [Pongo abelii] Length = 1459 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 782 AKHREVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHVAEYEHELSSLL----RE 837 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 838 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 897 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 898 LETVRQEQHKRLEDLRRRHREQERKLQDL 926 >gi|170589343|ref|XP_001899433.1| Liprin-alpha 2 [Brugia malayi] gi|158593646|gb|EDP32241.1| Liprin-alpha 2, putative [Brugia malayi] Length = 1190 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 57/196 (29%), Gaps = 8/196 (4%) Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI--KYKINTLNSLLKALPNSDQTLSC 323 M LQ L LEA+ + R+ + + L + + L Sbjct: 298 ATQKEGRMEQEQVNKLQHHLQELEAQREDQEARISTLESRYMGAQREATCLRDLNDKLEH 357 Query: 324 SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQI 383 D R E + + R + +K + +++ Q +E EQ Sbjct: 358 RLANKDAAVRLNEEKVRSLQERLELAEKQLAQSLKKAESLPSVEAELQQRMEALTAAEQ- 416 Query: 384 VKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + E+ ++A R R ++ R+ + + + + Sbjct: 417 ----KQLSAEEQMNRLARQVEERSAELERAVQREKMNEEHNQRLSSTVDKLLSESNDRLQ 472 Query: 444 -ITTRILQSFAYKNTL 458 +Q+ KN L Sbjct: 473 LHLKERMQALDEKNRL 488 >gi|1373041|gb|AAC52648.1| AT1-46 [Rattus norvegicus] Length = 472 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 15/207 (7%), Positives = 55/207 (26%), Gaps = 10/207 (4%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI-----KYKINTLNSLL 311 D+ A + ++ + + + + ++ + Sbjct: 202 DFVAKQKEDLELAMKKLTAENRREICDKERDCLNKKQELLRDREAALWEMEEHQLQERHQ 261 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 R+ L R + ++ R + K+ + Sbjct: 262 LVKQQLKDQYFLQRHDLLRKHEKEREQMQRYNQRMMEQLKVRQQQEKARLPKIQRSDGKT 321 Query: 372 HILEKQQHIE-----QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ + +Q + ++E+ +Q + + + + + Sbjct: 322 RMAMYKKSLHINGAGSASEQREKVKQFSQQEEKRQKAERLQQQQKHENQMRDMVAQCESN 381 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + CH V T+ L++ Sbjct: 382 MNELQQLQNEKCHLLVEHETQKLKALD 408 >gi|291405103|ref|XP_002719106.1| PREDICTED: centrobin, centrosomal BRCA2 interacting protein isoform 3 [Oryctolagus cuniculus] Length = 930 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 12/180 (6%), Positives = 51/180 (28%), Gaps = 2/180 (1%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + + + +E + + + + S + L L + + R+L Sbjct: 311 EEERQALTLTLEVEQQRSRALQQERDEARAGQLSERRKLETLQVALEEEQQSWAQQERQL 370 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + + + + + + + + + R Sbjct: 371 KERCQALQEEGQAQLEREKGSSQREAQAAREAQQQLALAQSEVRRLEGELDTARRERDAL 430 Query: 396 KEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + +++++ E + ++ +++ R+ I+ + + LQ Sbjct: 431 QLEMSLVQARYESQRIQMESELAVQLEQRVTERLAQAQESSIRQAASLREHHRKQLQDLN 490 >gi|237713163|ref|ZP_04543644.1| recombination enzyme [Bacteroides sp. D1] gi|237721681|ref|ZP_04552162.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262409445|ref|ZP_06085987.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|229446821|gb|EEO52612.1| recombination enzyme [Bacteroides sp. D1] gi|229449477|gb|EEO55268.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262352657|gb|EEZ01755.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] Length = 487 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 16/147 (10%), Positives = 45/147 (30%), Gaps = 1/147 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 + L L ++ R R + E +I ++ Sbjct: 201 RMKMLHDELSQVNEKWQLERGRNVSETGARHRSTEEYRRYLSEECTNIEEQVVQHKKALA 260 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 K + E++ + +LR EK+ +++ L + + + ++L Sbjct: 261 DLKVEISLAERRVKGLTSMVDNLRKAKAEKESQLSALERTLQSHQGDTATIIAERERLEK 320 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSF 452 + + K++ + + L++ Sbjct: 321 EL-ASIQTKLEDKQDKLRTADQQLEAL 346 >gi|260822731|ref|XP_002606755.1| hypothetical protein BRAFLDRAFT_82396 [Branchiostoma floridae] gi|229292099|gb|EEN62765.1| hypothetical protein BRAFLDRAFT_82396 [Branchiostoma floridae] Length = 744 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 15/172 (8%), Positives = 42/172 (24%), Gaps = 3/172 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + A + + + + LL R + + + + Sbjct: 267 REHREAILAMEDMHRLAMEANEEQHEQVLLTREKEQALLTEEHRQAIMTMEDRHRLAMGV 326 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI---EQIVKQHLRYIFLEKKEK 398 R + ++ + L ++ KQ + E+ K+ Sbjct: 327 NEERHKQALQASKDQHEQVLLARENEQAVLTEEHKQAILAMEERYRHAMHATEEQHKQVL 386 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 A + +E + I + R + + + L+ Sbjct: 387 QARENENKEALLAIVGEHKKAIVTMEERHRLAMQASENRHKQELQASKEKLE 438 >gi|68383801|ref|XP_695006.1| PREDICTED: WD repeat-containing protein 67 [Danio rerio] Length = 1070 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 52/142 (36%), Gaps = 8/142 (5%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNL------EIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + +R+ ++ L + + R K L+ ++ Sbjct: 674 KYPTFIVEYQSQERERIRQQEVEYLRERQEVQKLHAEAVRQQAEFEAWYKQQELLLQGEE 733 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 R+ IL++++ ++ +Q R ++++ K+ L ++ + + + + + R++ Sbjct: 734 QRRLILQEEE--SKLAQQRARLAAMKRELKVKELSLIDSSRRRFLKHQQDQRRVHLKRLD 791 Query: 429 FILSHKIKSCHTSVSITTRILQ 450 + K+ + + ++ Sbjct: 792 DEIQRKMALRDQETAAAVQEVE 813 >gi|327278928|ref|XP_003224211.1| PREDICTED: LOW QUALITY PROTEIN: probable serine protease HTRA3-like [Anolis carolinensis] Length = 586 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 4/67 (5%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTKKCQLHNNKREKQ 522 + + + ++ + + ++ + DG A + + + T K Sbjct: 319 IVTNA--HVVSSSSTVTGRQQLKVQLQDGDTYEAKIKDIDKKSDIATIKINPRKKLPALS 376 Query: 523 GTQ-GEL 528 Q G+L Sbjct: 377 IGQSGDL 383 >gi|302896802|ref|XP_003047280.1| hypothetical protein NECHADRAFT_54135 [Nectria haematococca mpVI 77-13-4] gi|256728210|gb|EEU41567.1| hypothetical protein NECHADRAFT_54135 [Nectria haematococca mpVI 77-13-4] Length = 455 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 60/176 (34%), Gaps = 2/176 (1%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 V+ + + L+ + + + L Q + + Sbjct: 221 QEVQREIAVAKAQLQEEIKELREMQEDMTKQSNERLAHEFATQRQAMEKQLKDANEAQAS 280 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L+ +LE ++ K + ++ ++ +++ R+ E +Q ++ ++ E Sbjct: 281 LKISLETLLEEKTAEYEEMLK--RAQEEQRRMEEERKRKEEDEQKKQRAEQERRDKEIEE 338 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 KK +IA + E+ + ++L +R+ +L + + L+ Sbjct: 339 KKREIAEKKRILEEKTRILEEKKRKQRQLESRMRALLQEQEEMKRQQQEEQEAALR 394 >gi|300022462|ref|YP_003755073.1| efflux transporter RND family, MFP subunit [Hyphomicrobium denitrificans ATCC 51888] gi|299524283|gb|ADJ22752.1| efflux transporter, RND family, MFP subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 463 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 6/63 (9%) Query: 466 QDTNNNFITQKRNLATKTRILI----NFFDGQANAIVINKAPPKEQPTKKCQLHNNKREK 521 QD I + + +++ DG A+ K PP Q H + Sbjct: 339 QDEKQAVI--AEGVKSGDTLVVNGFGRLKDGATVAVSDGKTPPASADAPAKQRHRQGGKA 396 Query: 522 QGT 524 G Sbjct: 397 AGD 399 >gi|307154953|ref|YP_003890337.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822] gi|306985181|gb|ADN17062.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7822] Length = 1204 Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats. Identities = 48/290 (16%), Positives = 95/290 (32%), Gaps = 23/290 (7%) Query: 184 DECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLW---HFNDEMIVRAIANSS 240 E +++ + L+ + DI R G EDL N E + +A + Sbjct: 737 KELSQKLTTFKQKERELQLQYAQHQKDI---ERLSGQKEDLNRQLWQNREELQQATSRLQ 793 Query: 241 -----IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNI 295 IPI+ H+ LA+ A + E+ +K +A Sbjct: 794 QLTQEIPILETQLHQEQQRLAELEASQTH---SQWLEIQAEIKATEVQLQQQEQAVRQAE 850 Query: 296 IIRLI-KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFN 351 + K L + + +D E++ L E I + F Sbjct: 851 ENAKDLQTKTQRLEEKILEAQQRIEGFHQQTLTIDEQKAEIQQQLLKSEANIAETEQLFQ 910 Query: 352 HIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 + ++ + + L+ QQ Q L + ++E+ A L L +Q +N Sbjct: 911 QLTEKLGETKKERDRTEAALRSLQTQQ---QKTSWSLEKLLQTQQERKAALESLEQQLEN 967 Query: 412 RIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 + L + +L I + L+ ++ + + + L++ N L Sbjct: 968 QRSELPEPLPELPETIMNQENLAQYLEQLQSEIKNGKKRLEAMEPVNMLA 1017 >gi|261378219|ref|ZP_05982792.1| SMC family protein [Neisseria cinerea ATCC 14685] gi|269145294|gb|EEZ71712.1| SMC family protein [Neisseria cinerea ATCC 14685] Length = 1161 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 17/152 (11%), Positives = 38/152 (25%), Gaps = 6/152 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L L L + L +R + Y + + H Sbjct: 192 QRLGDLQNELARQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQH 251 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + +Q Q L+ +++ + L R + +I L I+ Sbjct: 252 QSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQ 311 Query: 425 T------RIEFILSHKIKSCHTSVSITTRILQ 450 R + +++ + L+ Sbjct: 312 NLHQRIERDKQAAQAQLQRIYQEQQQIRVQLE 343 >gi|168334752|ref|ZP_02692880.1| putative multidrug efflux pump, membrane protein [Epulopiscium sp. 'N.t. morphotype B'] Length = 1192 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 25/193 (12%), Positives = 55/193 (28%), Gaps = 5/193 (2%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 D + A +E LQ LE I + + L N Sbjct: 984 LILDKKEKRGKKARYQTTQDQEELQLERQQLEKEQFKIEYEREELLKQLQPIENEILQNK 1043 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 + + +L + E + + + + ++ Q E+Q Sbjct: 1044 ESQ-ELQNREMQKLQEAQDLAEEQRVQAWQKLRREQEMQERQRQQDLQDGQDWQEQHEQQ 1102 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + EQ + + + ++ + R K + +T K + ++ I+ Sbjct: 1103 RDQEQQKMEEMEDLHERQRIQDQR---KRRDLKELLDIRNTQKIKKLQELQKS-KEYIEQ 1158 Query: 438 CHTSVSITTRILQ 450 +SI L+ Sbjct: 1159 MLQKLSIREERLK 1171 >gi|119365083|sp|P85001|CE290_DANRE RecName: Full=Centrosomal protein of 290 kDa; Short=Cep290 Length = 2439 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 25/255 (9%), Positives = 76/255 (29%), Gaps = 32/255 (12%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + A + + + + N++ + + + + + Q Sbjct: 1510 DSESQPTLKVAHQTINNLQGRLDQKEEVLKKYQNLLGKARQEQEEIAKRHEEEVRALHQK 1569 Query: 321 LSCS------RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-----FLIHNIQKN 369 L R++ L + + + + + + L ++ Sbjct: 1570 LDVYMDTSLDRFKQTALELIKKPTITVPTSKHLVRLAEMEQTVAEQDNSLSSLSQKLKIV 1629 Query: 370 RQHILEKQQ-HIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIFYLHTHIKKLITR 426 Q + +++Q Q ++ LE K + L E+ + ++ + + L T Sbjct: 1630 TQELDQQRQVTAAQAMEHAADMARLEDKHAAQMKGLSQEAEELRAQLIQMEKELHYLRTE 1689 Query: 427 IE-----------FILSHKIKSCHTSVSITTRILQSFAYKNTLK-RGYT-SIQDTNNNFI 473 +E + + ++ +++ + L++ + K L+ R I Sbjct: 1690 LEAQKEANVRSPSNTMKNLVERLKNQLALKEKQLKALS-KALLELR--AELTSQAEQQII 1746 Query: 474 TQKRNLATKTRILIN 488 T + + + Sbjct: 1747 TNAAQ--KEEALNVQ 1759 >gi|7500308|pir||T21636 hypothetical protein F32B4.3a - Caenorhabditis elegans Length = 1165 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 10/119 (8%), Positives = 40/119 (33%), Gaps = 1/119 (0%) Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 +E + + +++ + + I + ++ + R Sbjct: 935 RHWVEQLQRDEMDQMLHRLQFENKQLRKELEWKRGAASTMEIDRSSKRHQERHQSESRGG 994 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 L + +++ + Q++N + ++ R+E S ++ + + + + L+ Sbjct: 995 TLPLRNGRSVVSLKSTQSQNDVMDEAKALRLHKQRLEHR-SRILEQQNEQLEMQLQRLK 1052 >gi|320036057|gb|EFW17997.1| hypothetical protein CPSG_05634 [Coccidioides posadasii str. Silveira] Length = 756 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 29/318 (9%), Positives = 84/318 (26%), Gaps = 6/318 (1%) Query: 130 EGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKE 189 EG+ + ++ + + Q L + I + + +E Sbjct: 182 EGITDKNLIRLECQHRYCLKCFSTLVTTAMHNETQFPPRCCLLEIPIKVILHNLNNANRE 241 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGH 249 + ++ E G V+ I I Sbjct: 242 LFKEKTHEFSIPEQDRWYCHSATC-----GKWIPPKKVKSGATVQKCPFCKIEICGMCRG 296 Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 +L D D+ A++ + +++ L + ++I + T + Sbjct: 297 PVHVSLLDCPGDIGLEATLEEADLCGWRRCPQCRAMVELISGCRHMICKCRAQFCYTCGA 356 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + ++ L E E+ I + + ++ Sbjct: 357 RWRTCQCTEVDQRRREEELQDRRFERNAAAELEARELADALAEIERLEQREAEEIVRREE 416 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + E+++ E+ ++ + + ++A+ + + Q I L ++ Sbjct: 417 ARRRAEEEEAREREAQRMMAIAESTRNMRLALDRINKLQQTVLIKRHEADASSLQEELQD 476 Query: 430 ILSHKIKSCHTSVSITTR 447 + + + + R Sbjct: 477 QVK-QFELRRQRLESALR 493 >gi|301102708|ref|XP_002900441.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262102182|gb|EEY60234.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 1212 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 16/177 (9%), Positives = 52/177 (29%), Gaps = 6/177 (3%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD-----QTLSCSR 325 + + + L +L + + S+ + + L Sbjct: 998 LQQLCCDFDERLHEIEMLREKLADEKAHTTRVMRERDESVAQLAEQRRVLENLRRLDGVH 1057 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI-QKNRQHILEKQQHIEQIV 384 L ++ + + + H N + + + + NI + R + E+ + Sbjct: 1058 RSQLELLQKHILPKDRELVQMQEHLNQLHDANQEVVVQANISDRLRVEASSLARKQEREL 1117 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + + + + + + L E + + I I R+ ++ ++ + Sbjct: 1118 ETTSKRLERVRHSIVVLQEELGELVRRSAVQEKSAIVTEIGRLHKRMTRQLDALQAR 1174 >gi|307206052|gb|EFN84145.1| Nesprin-1 [Harpegnathos saltator] Length = 5147 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 25/255 (9%), Positives = 60/255 (23%), Gaps = 39/255 (15%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330 E + + + + + N K LP + R DR Sbjct: 3864 WEEYLTHVRDFLSSGVPGDYNGLSEYRNICEVHRKLLPEQQNLILTVRQEEDRDRSVAEQ 3923 Query: 331 ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L L I+ R + I K + + + ++Q + Sbjct: 3924 FNALTNLHNETLARILERHTTVRDRISAWDKYRQDQGRLLTWLKEVERERQRMHLQFIHL 3983 Query: 388 LRY--IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 R I + + L Q + + + + + + ++ Sbjct: 3984 KRLDKILQRIQALLDKLPSGEAQVGSLQEQQEYLLTDCDEALAVSIRMEHAASVQRIANL 4043 Query: 446 TRILQS----------FAYKNTLKRGYTSIQ---DTNNNFITQK------------RNLA 480 L++ ++ + G + ++ L Sbjct: 4044 RAGLETWRDFVQRVQKLHAQHVEQSG--LVTATFREIGQALSSAFHAGPTSLSRTKEQLE 4101 Query: 481 TKTRILINFFDGQAN 495 + + +GQ N Sbjct: 4102 SLQHLRTRLAEGQRN 4116 >gi|281412313|ref|YP_003346392.1| metal dependent phosphohydrolase [Thermotoga naphthophila RKU-10] gi|281373416|gb|ADA66978.1| metal dependent phosphohydrolase [Thermotoga naphthophila RKU-10] Length = 336 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 55 FSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 +L+D + A+ W + +EG V G++ F QI +++ Sbjct: 52 MTLEDRTGTVRAVDW-YNAELNDQRLKEGTVVRVKGRVVFFENR--IQINLDN 101 >gi|86609420|ref|YP_478182.1| RecF/RecN/SMC domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557962|gb|ABD02919.1| RecF/RecN/SMC N terminal domain protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 1205 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 21/188 (11%), Positives = 55/188 (29%), Gaps = 10/188 (5%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + L +LE R + + +L ++ L + + + +L R+ + Sbjct: 487 ELQPLCERQASLEQRHSQLGEKLASFQALRLELKQRETEQEQGQVQLQQLQLQLRQRQAD 546 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 I + ++ Q+ Q + E+ +R + E + Sbjct: 547 LERVAAIPALETQQERLQTQLSRIAAARQFQQELQALFEQGSDQLAQHHHSIRQLLDELE 606 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK---------SCHTSVSITTR 447 + L + RI + T L ++ + ++ +S + Sbjct: 607 AQRHNYPQL-QSLWQRIPEVLTRSSALSQQLLQSIHQILQDLAPQTSEPQLRQQLSNIQK 665 Query: 448 ILQSFAYK 455 L++ Sbjct: 666 QLRTLQPL 673 Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 15/188 (7%), Positives = 52/188 (27%), Gaps = 22/188 (11%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP--RELEHNLEIIIF 344 + + ++ ++ + L + LS + L E + Sbjct: 311 EKQQQQRLEWLKQRDALLSQKQHIENQLARLQEKLSQQQRWKQELEELTPQIQAQEELER 370 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 ++ + + IQ E+ Q ++ V++ + ++ ++ Sbjct: 371 QQTYWTQQLNTLLHLHREWEQIQAEWTAHAERCQLLQSRVQEAEQAQATCRQHQLTYNRY 430 Query: 405 L-----------REQTKNRIFYLHTHIKKLITRI---------EFILSHKIKSCHTSVSI 444 L +T+ + ++ + R+ + + K+++ + Sbjct: 431 LQLETLIAEQEALRRTRQTLLAQRETLQHQLHRLELQGSEYQQQLQIFQKMEAEKLELQP 490 Query: 445 TTRILQSF 452 S Sbjct: 491 LCERQASL 498 >gi|34327964|dbj|BAA31587.2| KIAA0612 protein [Homo sapiens] Length = 1810 Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 300 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 359 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 360 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 419 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 420 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 450 >gi|301629770|ref|XP_002944007.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Xenopus (Silurana) tropicalis] Length = 556 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 18/218 (8%), Positives = 58/218 (26%), Gaps = 2/218 (0%) Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 IS ++ + D PT + + + Sbjct: 91 FISCYLEPSETGIPCSYCDSPVPTVISCLHCEASLCDTHLRGHCQSAEHVLTEPTTSFMG 150 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + ++++ + + +C H +E++ + + ++ Sbjct: 151 RKCSVHNEPLKY-HCCEDSACICASCCLAGEHRGHRVELLSEASEKKKEKLRKVLEKLSP 209 Query: 363 IHN-IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 ++ Q + E+++ +E+ + + L L ++ + I + Sbjct: 210 EREETERGAQRLQERRRKLEEKATIETERVTALFRGIREELEALEKRLLSDISRQKEELS 269 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 +T + L K + + L+ Sbjct: 270 LTLTELIQQLEIKKDELSRKIRHIEELCNMADPLTVLQ 307 >gi|2149320|gb|AAB58543.1| dystrobrevin isoform DTN-1 [Homo sapiens] Length = 743 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|126668189|ref|ZP_01739150.1| OmpA/MotB [Marinobacter sp. ELB17] gi|126627338|gb|EAZ97974.1| OmpA/MotB [Marinobacter sp. ELB17] Length = 465 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 19/161 (11%), Positives = 47/161 (29%), Gaps = 9/161 (5%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL---EIIIFRKYRHFNHIINRIKSDF 361 ++L L + ++ ++D L +L + + ++ + + Sbjct: 157 QRRDALTSDLNAALAKQGDAQNQIDELTTQLTQATGQADTLTQQRDDLTATLTATQSAAN 216 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIK 421 +NR LEKQ R + + +A R+ + + Sbjct: 217 AQQTDAQNRIAELEKQLAEANAALADARQEVRQHQSALASATEQRQSVAEQYQQAREQLA 276 Query: 422 KLITRIEFI------LSHKIKSCHTSVSITTRILQSFAYKN 456 R + L ++ + LQS +++ Sbjct: 277 LQQARSQSATETINVLEARMAQEKAATDNLQSRLQSLSHEK 317 >gi|114672736|ref|XP_512087.2| PREDICTED: dystrobrevin alpha isoform 11 [Pan troglodytes] Length = 743 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|42718005|ref|NP_001381.2| dystrobrevin alpha isoform 1 [Homo sapiens] gi|229462840|sp|Q9Y4J8|DTNA_HUMAN RecName: Full=Dystrobrevin alpha; Short=DTN-A; AltName: Full=Alpha-dystrobrevin; AltName: Full=Dystrophin-related protein 3 Length = 743 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 419 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 478 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 479 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 538 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 539 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 571 >gi|301626985|ref|XP_002942662.1| PREDICTED: e3 ubiquitin/ISG15 ligase TRIM25-like [Xenopus (Silurana) tropicalis] Length = 541 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 19/193 (9%), Positives = 52/193 (26%), Gaps = 16/193 (8%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 Y D P T + + + + + + + Sbjct: 91 YCTDCYFPNATACSTCLLCNVSLCYEHAREHRKLAEHELTAPTPSQRDRY-----CPKHP 145 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 + L + + + + N + K + L ++K E + Sbjct: 146 ELLLEYYCPQDGVCICASCYRVGEHRGHRVEPLNEETSEKKKEKLREVLEKLSPEREETE 205 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 I+++ ++ E K A+ +R ++ L R+ +S + + Sbjct: 206 GQIQRLQERRREGAAGETKGVTALFRGIR-----------ERLEALEKRLLRDISREQEK 254 Query: 438 CHTSVSITTRILQ 450 + + L+ Sbjct: 255 VSRQLHCLIQQLE 267 >gi|301774711|ref|XP_002922771.1| PREDICTED: kinesin-like protein KIF20A-like [Ailuropoda melanoleuca] gi|281342955|gb|EFB18539.1| hypothetical protein PANDA_011785 [Ailuropoda melanoleuca] Length = 889 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 47/167 (28%), Gaps = 9/167 (5%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 ++E + + + + L D + E+ ++ Sbjct: 546 DDIENEADISMYGKEELLQVVEAMKALLCKERQEKLQLEMQLRDEICNEMVEQMQQREQW 605 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 H + ++ + + + ++ + ++ L+ + +E A+LH Sbjct: 606 CSEHLDTQKELLE--------EMYEEKLKILKESLTSFYQEELQERDEKIEELEALLHEA 657 Query: 406 REQTKNRIFYLHTHIKKLITRIEFIL-SHKIKSCHTSVSITTRILQS 451 R+Q + R+ + ++ + L S Sbjct: 658 RQQPVAPQQSGSELSLRRSQRLAASASNQQLHEVKAKLEQCRAELNS 704 >gi|291302592|ref|YP_003513870.1| PDZ/DHR/GLGF domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290571812|gb|ADD44777.1| PDZ/DHR/GLGF domain protein [Stackebrandtia nassauensis DSM 44728] Length = 614 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 3/46 (6%) Query: 464 SIQDTNNNFITQ--KRNLATKTRILINFFDGQA-NAIVINKAPPKE 506 + D + IT A+ ++ + F DG A V+ P + Sbjct: 343 VVYDDKGHIITNNHVAETASGGKLEVTFADGTTSQASVVGTDPAGD 388 >gi|224046212|ref|XP_002196791.1| PREDICTED: similar to dystrobrevin, alpha [Taeniopygia guttata] Length = 739 Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats. Identities = 15/155 (9%), Positives = 47/155 (30%), Gaps = 10/155 (6%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + + + + + F I ++ RQ I Sbjct: 414 SSPARVLDSASRLDEEHKLIARYAARLAAETSSSQPSQQRGASDISFTIDANKQQRQLIA 473 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILS 432 E + +I+++ R ++ ++ + L +L R+ + Sbjct: 474 ELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQE 533 Query: 433 HKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 534 SR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 567 >gi|322785580|gb|EFZ12235.1| hypothetical protein SINV_00990 [Solenopsis invicta] Length = 1719 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 17/181 (9%), Positives = 53/181 (29%), Gaps = 2/181 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 E + + ++ + + + +L + + + + Sbjct: 191 EKMLSEEVEKLRKEAEAKSGRCCALKAQLDSANDRFTNLQTHIATYKTQIKALEDKCNNY 250 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLR 389 + + + I+ K +++ + NI++ RQ + + + + E+ V Q R Sbjct: 251 SVTISKHEQSIMMLKDETLAAQSRLSRAEVQLDNIRQERQLLKDSETRLLKEREVFQRER 310 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + E+ + R L +++ T L Sbjct: 311 HSQALLYADVESIKASLERVQAEGQLRAEQRLDDANRECAALRRRLQEEQDRFRELTAHL 370 Query: 450 Q 450 + Sbjct: 371 E 371 >gi|307180375|gb|EFN68401.1| Citron Rho-interacting kinase [Camponotus floridanus] Length = 2946 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 13/203 (6%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEA--RLNNIIIRLIKYKINTLNSLLKALPNSD 318 R A E+A + Q L ++A + I ++ ++ + L S+ Sbjct: 1639 HCRESRLNVALELAQNELKDCQEQLRTIQATLPARDAEIETLRKQLQEKAKQIDDLKTSE 1698 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 Q L+ + +L+R+ E E + + K +IN +S+ L N+++ Q + Q+ Sbjct: 1699 QMLTSLQEQLERMNLENEQLKQQLEVTKSDLNETMINLEQSEALALNLEQAAQDKVTLQK 1758 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI-------- 430 ++ + + L K + L E + ++ + +K+L Sbjct: 1759 RLQDSLNKEEEQ--LRKVYNLEELLKRLEHSVTKLETENASLKELDQAQATNCAITDTKY 1816 Query: 431 -LSHKIKSCHTSVSITTRILQSF 452 ++ KI + + LQ+ Sbjct: 1817 EVNAKIDHWQEKIEKLEQQLQAL 1839 >gi|302848217|ref|XP_002955641.1| centriole protein [Volvox carteri f. nagariensis] gi|300259050|gb|EFJ43281.1| centriole protein [Volvox carteri f. nagariensis] Length = 480 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 51/170 (30%), Gaps = 3/170 (1%) Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 +++ + + + L KAL ++ L R RL L E + I + + Sbjct: 66 HVLEWEARKRAEEVRDLQKALSDAHNFLFDERQRLLALQAENDDLRLQEIQDRKTIQQLL 125 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 + + + ++ L+ + A L+ ++ RI Sbjct: 126 AGGPHAAQGPRQQPGQQGRGAAAAASSSAVPGPSTDHLLLQIESLHAQLNEQKQLAAERI 185 Query: 414 FYLHTHIKKLIT---RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 L + L+ +++ + + L++ L R Sbjct: 186 AALQEDRRIREQEEEAHRRALTQQLEVATERLQRLEQQLRTTTKDYILGR 235 >gi|296234418|ref|XP_002807906.1| PREDICTED: LOW QUALITY PROTEIN: myosin-14-like [Callithrix jacchus] Length = 1991 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 17/238 (7%), Positives = 61/238 (25%), Gaps = 26/238 (10%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + S + + ++ + ++ + ++ + +R RL Sbjct: 1666 EELKAQLVSAGQGKEEAVKQLRKMQAQMKELWREVEESRSSREEIFAQNRESDKRLKGLE 1725 Query: 336 EHNLE----IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L + + + + R+ +++ +L + + + L Sbjct: 1726 AEVLRLQEVRLGASNFDEKDQLXGRLGQLEXELEEEQSNSELLNDRYRKLLLQVESLTSE 1785 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 ++ A R+Q + +I L + + I + + ++ L+ Sbjct: 1786 LSAERSFSAKAESGRQQLERQIQELRGRLGEEDAGARARQKMTIAALESKLAQAEEQLEQ 1845 Query: 452 FAYKNTLKRGYTSIQDTNNNFITQKR--------NL----ATKTRILINFFDGQANAI 497 + + L + + + ++ G Sbjct: 1846 ESRERILS----------GKLVRRAEKRLKEVVLQVEEERRVADQLRDQLEKGNLRVK 1893 >gi|171906567|ref|NP_077729.1| peripheral-type benzodiazepine receptor-associated protein 1 isoform b [Homo sapiens] Length = 1797 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 287 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 346 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 347 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 406 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 407 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 437 >gi|168700440|ref|ZP_02732717.1| hypothetical protein GobsU_12992 [Gemmata obscuriglobus UQM 2246] Length = 1288 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 16/179 (8%), Positives = 44/179 (24%), Gaps = 9/179 (5%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + E + + + L L Q LS R E Sbjct: 261 DQVQSEREALDAERAAHEPRAQALRDGETRLAAQAQELSRQRDMFAADRDIFERERTTFE 320 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 +K + + +R+ ++ + + + + + + A L Sbjct: 321 AQKAADAERLTAWEADLSTRERVVSDRETLVRAARDEFEAERARFQDDLARLERRTAALE 380 Query: 404 MLREQTKNRIFYLHTHIKKLITR---------IEFILSHKIKSCHTSVSITTRILQSFA 453 R ++ + +L + +++S + L + + Sbjct: 381 AAERAVAVRTQEVNVRLDQLKRDATEWEETVGLAAAEQERLRSEAERLDHQRTELDAQS 439 >gi|149179155|ref|ZP_01857724.1| CMP-binding protein [Planctomyces maris DSM 8797] gi|148842015|gb|EDL56409.1| CMP-binding protein [Planctomyces maris DSM 8797] Length = 323 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%) Query: 56 SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 L+D+ ++A +W L + + G GK+ F QII+ + P Sbjct: 39 DLRDSTGVVNARMW-NVLEERMQHFQSGNYVQAKGKVHLF--QGTLQIILTYIEPV 91 >gi|119621725|gb|EAX01320.1| dystrobrevin, alpha, isoform CRA_b [Homo sapiens] Length = 740 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 416 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 475 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 476 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 535 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 536 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 568 >gi|332848618|ref|XP_003315685.1| PREDICTED: LOW QUALITY PROTEIN: peripheral-type benzodiazepine receptor-associated protein 1-like [Pan troglodytes] Length = 1873 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497 >gi|327357041|gb|EGE85898.1| hypothetical protein BDDG_08843 [Ajellomyces dermatitidis ATCC 18188] Length = 702 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 20/54 (37%), Gaps = 1/54 (1%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + L E + R+ +K R++ ++K+ + L++ Sbjct: 8 RAELQRQLAEAIRARLEAKQERLKAQRARLK-AQRARLKAKQARLKAKQARLKA 60 >gi|291405099|ref|XP_002719104.1| PREDICTED: centrobin, centrosomal BRCA2 interacting protein isoform 1 [Oryctolagus cuniculus] Length = 898 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 12/180 (6%), Positives = 51/180 (28%), Gaps = 2/180 (1%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + + + +E + + + + S + L L + + R+L Sbjct: 305 EEERQALTLTLEVEQQRSRALQQERDEARAGQLSERRKLETLQVALEEEQQSWAQQERQL 364 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + + + + + + + + + R Sbjct: 365 KERCQALQEEGQAQLEREKGSSQREAQAAREAQQQLALAQSEVRRLEGELDTARRERDAL 424 Query: 396 KEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + +++++ E + ++ +++ R+ I+ + + LQ Sbjct: 425 QLEMSLVQARYESQRIQMESELAVQLEQRVTERLAQAQESSIRQAASLREHHRKQLQDLN 484 >gi|269954670|ref|NP_001161739.1| centrosomal protein of 290 kDa [Danio rerio] Length = 2439 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 25/255 (9%), Positives = 76/255 (29%), Gaps = 32/255 (12%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + A + + + + N++ + + + + + Q Sbjct: 1510 DSESQPTLKVAHQTINNLQGRLDQKEEVLKKYQNLLGKARQEQEEIAKRHEEEVRALHQK 1569 Query: 321 LSCS------RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-----FLIHNIQKN 369 L R++ L + + + + + + L ++ Sbjct: 1570 LDVYMDTSLDRFKQTALELIKKPTITVPTSKHLVRLAEMEQTVAEQDNSLSSLSQKLKIV 1629 Query: 370 RQHILEKQQ-HIEQIVKQHLRYIFLEKKEKIAI--LHMLREQTKNRIFYLHTHIKKLITR 426 Q + +++Q Q ++ LE K + L E+ + ++ + + L T Sbjct: 1630 TQELDQQRQVTAAQAMEHAADMARLEDKHAAQMKGLSQEAEELRAQLIQMEKELHYLRTE 1689 Query: 427 IE-----------FILSHKIKSCHTSVSITTRILQSFAYKNTLK-RGYT-SIQDTNNNFI 473 +E + + ++ +++ + L++ + K L+ R I Sbjct: 1690 LEAQKEANVRSPSNTMKNLVERLKNQLALKEKQLKALS-KALLELR--AELTSQAEQQII 1746 Query: 474 TQKRNLATKTRILIN 488 T + + + Sbjct: 1747 TNAAQ--KEEALNVQ 1759 >gi|195132935|ref|XP_002010895.1| GI21796 [Drosophila mojavensis] gi|193907683|gb|EDW06550.1| GI21796 [Drosophila mojavensis] Length = 1041 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 8/171 (4%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + + + N E + + K +L N Q + R+ + Sbjct: 660 DRKLFDSTRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMIQA 719 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 ++ R+ +++ ++ L + K +Q + + + +K H + Sbjct: 720 QKQFVELEMRKFKRRRMI---LLHGLEDQLLRDELSKKQQQLEQAHAML---LKHHEKTQ 773 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHT 440 LE +++ ++ + EQ + + K + RI L K ++ Sbjct: 774 ELEYRQQKSVHQLREEQINKQHDTELHNQKDYMERITKELLRKHALELRQQ 824 >gi|194856553|ref|XP_001968775.1| GG25055 [Drosophila erecta] gi|190660642|gb|EDV57834.1| GG25055 [Drosophila erecta] Length = 8391 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 20/212 (9%), Positives = 58/212 (27%), Gaps = 21/212 (9%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + A L ++ + R + +L ++ + ++ Sbjct: 7707 HFNIQKLSHAIGNVQSQSSDLTLVNQQAQSLIRQADARNRQLIEQDNAALNRSWQDLVRS 7766 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R L +L + E + + + ++ ++ +++ + Q + Sbjct: 7767 LEQRRDSLQQLAEHWDG-FENSLHAWEKALGRLEDKFRNVDPTVRSRRHLEDTKNAIQEL 7825 Query: 381 E---QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS----- 432 +K + I K + L + + + I + + ++ L Sbjct: 7826 REESNQLKSSHKEIEALSKSILTFLGEVHKPSAEAIQAKVDKLVEQQAKLNDTLRDKEQQ 7885 Query: 433 ------------HKIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 7886 VSKDLEEIEQVFRRISQLQDKLNALHDQLQSV 7917 >gi|152012816|gb|AAI50280.1| BZRAP1 protein [Homo sapiens] gi|208967661|dbj|BAG72476.1| benzodiazapine receptor (peripheral) associated protein 1 [synthetic construct] Length = 1797 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 287 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 346 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 347 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 406 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 407 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 437 >gi|119614875|gb|EAW94469.1| benzodiazapine receptor (peripheral) associated protein 1, isoform CRA_b [Homo sapiens] Length = 1797 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 287 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 346 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 347 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 406 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 407 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 437 >gi|119602251|gb|EAW81845.1| protein phosphatase 1, regulatory (inhibitor) subunit 13B, isoform CRA_a [Homo sapiens] Length = 957 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 16/219 (7%), Positives = 56/219 (25%), Gaps = 21/219 (9%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 L D AA + + + + + ++ + + L Sbjct: 131 LQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERVEAQENKL 190 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + NL I R F +++ L + + Q + Sbjct: 191 KKIRAM-----RGQVDYSKIMNGNLSAEIERFSAMFQEKKQEVQTAIL--RVDQLSQQLE 243 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---- 430 + ++ + + + ++ L+ + ++ +++ + Sbjct: 244 DLKKGKLNGFQSYNGKLTGPAAVELKRLYQELQIRNQLNQEQNSKLQQQKELLNKRNMEV 303 Query: 431 --LSHKIKSCHTSVS----ITTRILQ----SFAYKNTLK 459 + +I + L + + ++ L Sbjct: 304 AMMDKRISELRERLYGKKIQACEKLNRVNGTSSPQSPLS 342 >gi|57999440|emb|CAI45931.1| hypothetical protein [Homo sapiens] Length = 2039 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNKLMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1851 NMEKLTEERDQRIAA 1865 >gi|3043566|dbj|BAA25447.1| KIAA0521 protein [Homo sapiens] Length = 1050 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%) Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + +L + L N ++ R RE + L+ N K Sbjct: 679 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 738 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++K + + +QQ E+ + + + ++ Q + R+ Sbjct: 739 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 797 Query: 420 IKKLITRIEFILSHKIKSCHT 440 + R H ++ Sbjct: 798 L----ERQRQAYQHDLERLRE 814 >gi|261202654|ref|XP_002628541.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] gi|239590638|gb|EEQ73219.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081] Length = 720 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 7/54 (12%), Positives = 19/54 (35%), Gaps = 1/54 (1%) Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + L E + R+ +K R+ ++K+ + L++ Sbjct: 8 RAELQLQLAEAIQARLEAKQERLKAQRARL-QAQRARLKAQRARLKAKQARLKA 60 >gi|217964278|ref|YP_002349956.1| DNA polymerase III subunit alpha [Listeria monocytogenes HCC23] gi|217333548|gb|ACK39342.1| DNA polymerase III subunit alpha [Listeria monocytogenes HCC23] Length = 1108 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|148548924|ref|YP_001269026.1| SMC domain-containing protein [Pseudomonas putida F1] gi|148512982|gb|ABQ79842.1| SMC domain protein [Pseudomonas putida F1] Length = 1214 Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats. Identities = 19/199 (9%), Positives = 55/199 (27%), Gaps = 9/199 (4%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL---KALPNS 317 DL P A + + +L A+ + + + K Sbjct: 772 DLAGVLPEEALKALNDDPANAFLALDQQIAQRLQQLEQRKDEQEEQQARQAQLDKLRDQQ 831 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 + + L E + H + +++ R + Sbjct: 832 QARVQGLQQLQHTLAALDEQRQQAQTSLGELLGEHASAEACQQHMEATLEQARALDADTA 891 Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKL----ITRIEFIL 431 Q ++ + Q ++ K ++ L +Q + +I + +L + R+ + Sbjct: 892 QRLQDLRTQGVQLASELKANTQQQQALDAECQQLQAQIAQWRSEHPELDDAGLDRLLAMD 951 Query: 432 SHKIKSCHTSVSITTRILQ 450 ++ + + ++ Sbjct: 952 DAQVNELRQRLQGAEKAIE 970 >gi|326434950|gb|EGD80520.1| hypothetical protein PTSG_01111 [Salpingoeca sp. ATCC 50818] Length = 1133 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 9/96 (9%), Positives = 27/96 (28%), Gaps = 1/96 (1%) Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 N + + I QQ ++ K + + + + + RI Sbjct: 208 SNPLMQPPPHICSRGRVHIINFLQQEKQRAAKATQDLQASAAQARDVDVEDASAKEQERI 267 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + R++ + +++ + L Sbjct: 268 NEREKQMAEEAQRLQQ-MRAQLEQKEQELQAAQERL 302 >gi|322492254|emb|CBZ27528.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 866 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 13/165 (7%), Positives = 43/165 (26%), Gaps = 2/165 (1%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + + R + L L + + L + + + RE ++ Sbjct: 21 QQARMSEETCAELRRRCQGLETEKQGLRLELQQAQERLQARQAQTEEQRREAAEAKLTVL 80 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK--QHLRYIFLEKKEKIAI 401 ++ + + + Q ++ + QH + + L++ + Sbjct: 81 SLTAERDELSAKVQEAWDRVAEFSAALRRQETEMQRLQAGITTAQHSKELTLQQHSHMEQ 140 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + ++ R+ L ++ +S Sbjct: 141 QLRILQEQLRVHETDEHANAAARQRLSAALQSALERLAELLSNVA 185 >gi|307571155|emb|CAR84334.1| dnaE [Listeria monocytogenes L99] Length = 1095 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 951 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1008 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1009 ELQLIINKAE 1018 >gi|291405101|ref|XP_002719105.1| PREDICTED: centrobin, centrosomal BRCA2 interacting protein isoform 2 [Oryctolagus cuniculus] Length = 906 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 12/180 (6%), Positives = 51/180 (28%), Gaps = 2/180 (1%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + + + +E + + + + S + L L + + R+L Sbjct: 311 EEERQALTLTLEVEQQRSRALQQERDEARAGQLSERRKLETLQVALEEEQQSWAQQERQL 370 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + + + + + + + + + R Sbjct: 371 KERCQALQEEGQAQLEREKGSSQREAQAAREAQQQLALAQSEVRRLEGELDTARRERDAL 430 Query: 396 KEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + +++++ E + ++ +++ R+ I+ + + LQ Sbjct: 431 QLEMSLVQARYESQRIQMESELAVQLEQRVTERLAQAQESSIRQAASLREHHRKQLQDLN 490 >gi|290894457|ref|ZP_06557416.1| DNA polymerase III [Listeria monocytogenes FSL J2-071] gi|290555995|gb|EFD89550.1| DNA polymerase III [Listeria monocytogenes FSL J2-071] Length = 1108 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|260796647|ref|XP_002593316.1| hypothetical protein BRAFLDRAFT_123650 [Branchiostoma floridae] gi|229278540|gb|EEN49327.1| hypothetical protein BRAFLDRAFT_123650 [Branchiostoma floridae] Length = 1260 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 15/182 (8%), Positives = 52/182 (28%), Gaps = 9/182 (4%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + V + R + ++++ + +T + + L + L+ + Sbjct: 361 KAIRVESERDQLLQQAEALQREVDNFNQMLETERSTFRAQEEELQKQLELLTEKHQEVVD 420 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 + H + + N I + N + L+ + +++ R+ Sbjct: 421 QEKAAVHAESQKAQEHQKALSSAHNEIGQLKMELNAANRDKENLKMELSLQEA-----RF 475 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK----SCHTSVSITT 446 + K + + ++ H + + R+ +I+ + Sbjct: 476 EASQSKLESEYQAEQERKMSQQLSEAHDQLTQTEERLREQHRRQIQEVADRHRQDLDTHM 535 Query: 447 RI 448 + Sbjct: 536 KQ 537 >gi|114658386|ref|XP_001151672.1| PREDICTED: golgi autoantigen, golgin subfamily a, 6 isoform 1 [Pan troglodytes] Length = 712 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 53/180 (29%), Gaps = 14/180 (7%) Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 K+ I+ + L ++L ++ R+ L+ + + + Sbjct: 255 RPWKEEKKHDIHRIQELERSLSELQNQVAEPRFPAPPAGTSELEQLQDEAKQLRKEVEGL 314 Query: 354 INRIKSD-------FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 ++ S L+ Q R E+++ EQ E+++++ Sbjct: 315 EGKLPSQVENNQTLSLLSKEQNERLQEQEERRVREQERLCEQNERLQEQQKRLGEQGERL 374 Query: 407 EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH------TSVSITTRILQSFAYKNTLKR 460 + + R+ ++K R+ + L + + + L + Sbjct: 375 RKQEQRLQKQEERLQKEEERLRKQEERLWDQEKRLWDKEERLQKQEERL-TLSQNHKLDK 433 >gi|118371099|ref|XP_001018749.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena thermophila] gi|89300516|gb|EAR98504.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena thermophila SB210] Length = 1823 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 22/197 (11%), Positives = 70/197 (35%), Gaps = 11/197 (5%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 A + + + ++ N R+ ++ + + + N LN + + + Sbjct: 712 RYYQAKNEAEMLLEKLHQAKLANATNERNRIQSLENEIEQLRQNQLNIYSEE----GKLI 767 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF--LIHNIQKNRQHILEKQQH 379 + + + L ++ H +++ + + + + + L I+K + E +Q+ Sbjct: 768 QQYKKQNEDLTKKYNHLQKLLEENEKQKLEDLKKQQDAHQKELQEKIEKEKLEQKEPEQN 827 Query: 380 IEQIVK----QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 ++ +V+ + + KK+K L + + + +I L+ +I Sbjct: 828 LQPVVQDIESNRYKMKYEAKKQKYKNLKTEMKNMYEELKQMTQENIDNNQKIN-SLNQQI 886 Query: 436 KSCHTSVSITTRILQSF 452 + + + + L Sbjct: 887 QHYNHQLQQANQQLHLL 903 >gi|34535742|dbj|BAC87417.1| unnamed protein product [Homo sapiens] gi|109731129|gb|AAI13713.1| FLJ46536 protein [Homo sapiens] gi|313882966|gb|ADR82969.1| RUN and FYVE domain containing 4 (RUFY4) [synthetic construct] Length = 398 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 11/87 (12%), Positives = 32/87 (36%), Gaps = 1/87 (1%) Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + ++ +L +Q+ Q +++ L E+ E A L +++ + R + Sbjct: 256 AQRQEQLLREQEGELQALREQLSRCQEERAELQAQLEQKQQEAERRDAMYQEELGGQRD- 314 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFA 453 + + ++ + LQ + Sbjct: 315 LVQAMKRRVLELIQEKDRLWQRLQHLS 341 >gi|297302892|ref|XP_001119791.2| PREDICTED: involucrin-like, partial [Macaca mulatta] Length = 376 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 58/180 (32%), Gaps = 6/180 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 +E L + E +L + + K LK L + + L ++ +L Sbjct: 47 EQQEGQLKHLEHQEGQLELPEQQEGQLKHLEQQEGQLKHLEHQEVQLDLPEQQVGQLKHM 106 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + + + + + + ++++ + + +Q Q+ + L+ Sbjct: 107 EQQVEQ--LKHLEQQEEQLEHLEQQKGQLEHLEQQKGQLEHLEQQEGQVEHLEQQEGQLK 164 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 E+ EQ + ++ + +L +E ++ + L+ Sbjct: 165 HLEEEKGQLKHLEQQEGQLELPEQQVGQL-KHLEQQEEQLEHLEQQKGQLEQQEGQLEHL 223 >gi|194212722|ref|XP_001502736.2| PREDICTED: similar to centrosomal protein 164kDa [Equus caballus] Length = 1404 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 48/149 (32%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + +E E +K + + Sbjct: 771 AKHRQVVSSLQKKMEEAQQKEEAQLQESLGRAEQRAQQKVHQVLEYEQELSGLLREKRQE 830 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 R+H ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 831 VEREH----ERKLDKMKEEHRQVVAEAREQYEAEERKQRAELLGHLTGELERLRRAHERE 886 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 887 LETMRQDQDRQLEDLRRRHREQERKLQDL 915 >gi|209525347|ref|ZP_03273888.1| conserved hypothetical protein [Arthrospira maxima CS-328] gi|209494198|gb|EDZ94512.1| conserved hypothetical protein [Arthrospira maxima CS-328] Length = 688 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 24/244 (9%), Positives = 70/244 (28%), Gaps = 32/244 (13%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 D A + S+ ++ R + I + +++ L + Sbjct: 350 CDRLKSWLNKAGMADIEETAIRMSTQVDDVDRQLAEFWQEIDHHQISISKNRAELSQIET 409 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 L + +L P E L+ + + + S+ I+ Q + + Sbjct: 410 RLDDIKKKLRNFPDEDIQKLQKRLDEIESSIGELNREMGSNS--QQIETLTQECEKLSKQ 467 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCH 439 I++ ++ I +++ + +++ R++ +++ Sbjct: 468 IDRQQMNEMKQITAQRRIAAT-------------EDAIARLSQVLERLDQQFRQQLE--- 511 Query: 440 TSVSITTRILQ------SFAYKNTLKRGYTSIQDTNNN--FITQKRNLATKTRILINFFD 491 + V + + K LK ++ T+ + + ++F Sbjct: 512 SRVQNIFAKISFTPYQPQLSPKYELK----LVERTSGEDAPVASSTG--ENQILSLSFIG 565 Query: 492 GQAN 495 G Sbjct: 566 GIIE 569 >gi|145509184|ref|XP_001440536.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407753|emb|CAK73139.1| unnamed protein product [Paramecium tetraurelia] Length = 1093 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 23/213 (10%), Positives = 63/213 (29%), Gaps = 8/213 (3%) Query: 241 IPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLI 300 I + L D + ++ ++ + +A N+I+I+ Sbjct: 710 IVVKEKTSQFDTQNLRDQLQQYKQANTQLNQDIQTLREQVQKYRSEIGQANQNHIVIQRE 769 Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 ++ L + L + +L+ +L R Sbjct: 770 TQLNKQNQGEIEKLMARIRELDFESQQKTSQINQLQMDLRNQEIRVRNELEQQF------ 823 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + RQ++ K Q Q+L+Y +++++ +Q + + I Sbjct: 824 --TSRLTIERQNLESKMQTQSSGETQNLQYQLKSLQQELSQYKQRYQQLEQQFNQSKIEI 881 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + ++ + ++K ++ Q+ Sbjct: 882 TQFRSQQSNVNLDQVKQLQQRIAKLESENQTLN 914 >gi|119589445|gb|EAW69039.1| hCG22253, isoform CRA_a [Homo sapiens] gi|119589446|gb|EAW69040.1| hCG22253, isoform CRA_a [Homo sapiens] gi|208965454|dbj|BAG72741.1| rho/rac guanine nucleotide exchange factor (GEF) 18 [synthetic construct] Length = 1015 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%) Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + +L + L N ++ R RE + L+ N K Sbjct: 644 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 703 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++K + + +QQ E+ + + + ++ Q + R+ Sbjct: 704 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 762 Query: 420 IKKLITRIEFILSHKIKSCHT 440 + R H ++ Sbjct: 763 L----ERQRQAYQHDLERLRE 779 >gi|41327769|ref|NP_056133.2| rho guanine nucleotide exchange factor 18 isoform a [Homo sapiens] Length = 1015 Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 40/141 (28%), Gaps = 10/141 (7%) Query: 305 NTLNSLLKALPNSDQTLSCS-----RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + +L + L N ++ R RE + L+ N K Sbjct: 644 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 703 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++K + + +QQ E+ + + + ++ Q + R+ Sbjct: 704 REERAALEKLQSQLRHEQQRWERERQWQHQELER-AGARLQEREGEARQLRERLEQERAE 762 Query: 420 IKKLITRIEFILSHKIKSCHT 440 + R H ++ Sbjct: 763 L----ERQRQAYQHDLERLRE 779 >gi|224499768|ref|ZP_03668117.1| hypothetical protein LmonF1_08799 [Listeria monocytogenes Finland 1988] Length = 1108 Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|47096787|ref|ZP_00234369.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|254898259|ref|ZP_05258183.1| hypothetical protein LmonJ_00550 [Listeria monocytogenes J0161] gi|254912248|ref|ZP_05262260.1| DNA polymerase III [Listeria monocytogenes J2818] gi|254936575|ref|ZP_05268272.1| DNA polymerase III [Listeria monocytogenes F6900] gi|47014820|gb|EAL05771.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 1/2a F6854] gi|258609171|gb|EEW21779.1| DNA polymerase III [Listeria monocytogenes F6900] gi|293590225|gb|EFF98559.1| DNA polymerase III [Listeria monocytogenes J2818] Length = 1108 Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|317049112|ref|YP_004116760.1| phosphate ABC transporter inner membrane subunit PstA [Pantoea sp. At-9b] gi|316950729|gb|ADU70204.1| phosphate ABC transporter, inner membrane subunit PstA [Pantoea sp. At-9b] Length = 532 Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 8/105 (7%) Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH--IKKLITR 426 R QQ +E V LR ++ +A L+ E + + L Sbjct: 134 ARDRDALLQQRLE-AVHDQLRQASRIRRIDMARLNAQLENLQQQAEEQQRKGEFSALRQS 192 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 S ++ +++ LQ+ + ++ L ++D Sbjct: 193 EFDANSAALQRRFNALANQLSQLQTASQRDVL-----VLRDVQGQ 232 >gi|294814013|ref|ZP_06772656.1| putative serine protease [Streptomyces clavuligerus ATCC 27064] gi|326442417|ref|ZP_08217151.1| putative serine protease [Streptomyces clavuligerus ATCC 27064] gi|294326612|gb|EFG08255.1| putative serine protease [Streptomyces clavuligerus ATCC 27064] Length = 332 Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506 I ++ IT ++ + + DG+ A V+ P K+ Sbjct: 131 VIITSDGEIITNNHVISGADTVSVRLSDGRVLTADVVGTDPGKD 174 >gi|254388577|ref|ZP_05003811.1| serine protease [Streptomyces clavuligerus ATCC 27064] gi|197702298|gb|EDY48110.1| serine protease [Streptomyces clavuligerus ATCC 27064] Length = 396 Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQA-NAIVINKAPPKE 506 I ++ IT ++ + + DG+ A V+ P K+ Sbjct: 195 VIITSDGEIITNNHVISGADTVSVRLSDGRVLTADVVGTDPGKD 238 >gi|268557102|ref|XP_002636540.1| C. briggsae CBR-LIN-5 protein [Caenorhabditis briggsae] Length = 803 Score = 37.8 bits (86), Expect = 4.5, Method: Composition-based stats. Identities = 22/182 (12%), Positives = 55/182 (30%), Gaps = 6/182 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 ++ ++L + RL I L + + +N + + L R + L L Sbjct: 412 QDADNAMTTLGDERERLKQTISTLQREHVERMNMSKSTIERIQRELEEERKDKNELSSLL 471 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 E + + + + + +K Q + + + E R I K Sbjct: 472 NELNEKALGTDKETHDQAEGFLSARACLEGAKKRIQQLELELKGKEGFNAVLERQIEKSK 531 Query: 396 KEKIAILHMLRE------QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + L + + K + + + I ++ + + I + L Sbjct: 532 EILQTELMIREQSAIQFHNVKAELEEQSVNKDREIVLLKENMQNLIARHQNQMEEQQSAL 591 Query: 450 QS 451 ++ Sbjct: 592 KA 593 >gi|322490482|emb|CBZ25742.1| putative kinesin [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1034 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 17/197 (8%), Positives = 59/197 (29%), Gaps = 6/197 (3%) Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 T+ + D A + + E L R +++ ++ + Sbjct: 664 TVMELVKDKEALLLRACNGVLIANNESAAMLGKMLSEREDDLRNTKRLHEEELATQAERF 723 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + L + +L + + R R K ++ + Sbjct: 724 CERLKEALDEGAVQQQQLLDRHREAVAQLEGRLQRSHEINEME------RKRNDKEKEEL 777 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++ Q ++ ++ + + ++ R ++ + + L ++ + R+ ++ Sbjct: 778 RQRVQLAQERMRNEYQQEIERLRARVEGDIGDRYKSGDAVRQLQAMHEREMERLRDEINL 837 Query: 434 KIKSCHTSVSITTRILQ 450 +S + + L+ Sbjct: 838 LKRSKDSDCARLHNQLE 854 >gi|307546311|ref|YP_003898790.1| chromosome segregation protein [Halomonas elongata DSM 2581] gi|307218335|emb|CBV43605.1| K03529 chromosome segregation protein [Halomonas elongata DSM 2581] Length = 1164 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 18/178 (10%), Positives = 44/178 (24%), Gaps = 1/178 (0%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + I + +++ L A L Sbjct: 180 TENRMRRTQENLERLEDIREELDKQLDKLKRQADAARRYQTLKQEEYRLKGELALLRGRA 239 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 L+ + + ++ + L + R + + + F E Sbjct: 240 LKASQDEEEARVGELETAVEREVLGLRQCETRLEEARAEHDRLASELEGYQARFHETTTA 299 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 IA L E T+ R L ++ ++ L + ++ L++ + Sbjct: 300 IARLEQDLEHTRARDQQLARDLESARRELDD-LKRVGEDDGERLTRLDERLETLGPEQ 356 >gi|300705406|ref|YP_003747009.1| methylmalonyl-CoA mutase [Ralstonia solanacearum CFBP2957] gi|299073070|emb|CBJ44427.1| METHYLMALONYL-COA MUTASE [Ralstonia solanacearum CFBP2957] Length = 1099 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 49/403 (12%), Positives = 103/403 (25%), Gaps = 28/403 (6%) Query: 78 FLPEEGIEFLVIGKITTFPGSSKYQIIIES---LIPSGSGTLLTALEKRKKKLLEEGL-- 132 + PE+G + G I + ++ L P +G AL + L + Sbjct: 134 YSPEDGQRMGLAGMIADMARRCDIDLSTDAPATLEPVAAGD-RRALAQLITALESGRIDP 192 Query: 133 -FSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCRFPL--RVIIFPVKVQGDECPKE 189 + P + IT GA + + RF L + + D ++ Sbjct: 193 VLRQAVRERALATPTPVLGITGTGGAGKSSLTDELIRRFRLDQHDRLRIAVISIDPSRRK 252 Query: 190 IANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPII--SAI 247 A+L P + +A + E D + + I+ S I Sbjct: 253 SGGALLGDRIRMNAINHPHLFVRSMATREAASEIADALPDAIAACRAGGFDLIIVETSGI 312 Query: 248 GHET--DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKIN 305 G L D + + P A+++ + + Sbjct: 313 GQGDAAIVPLVDLSLYVMTPEFGAASQLEKIDMLDFADLVAINKFDRKGAQDAWRDVCKQ 372 Query: 306 TLNSLLKALPNSDQTL---SCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSD 360 + + + + + + D L H L + + Sbjct: 373 VQRNREQWDARPEAMPVFGTQASHFNDDGVTALYHALADRLAECGLALGERTLPRPPGPC 432 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 H+ + + + + H R E + ++A + ++ + Sbjct: 433 STSHDAIVPPARVRYLAEVADTVRGYHRR---AEAQSRLARERQQLQASRRMLEQAGAAG 489 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYT 463 L + R L + L+R Y Sbjct: 490 DALAALDTQAAER-----DARLGAAERKLLAMWPD--LRRAYA 525 >gi|242001050|ref|XP_002435168.1| septin, putative [Ixodes scapularis] gi|215498498|gb|EEC07992.1| septin, putative [Ixodes scapularis] Length = 426 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 22/204 (10%), Positives = 62/204 (30%), Gaps = 9/204 (4%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D + + +P+ + + + ++ + + + Sbjct: 224 DETSAEINQSMNAHIPLAVVGSTDFVRVGNKMVRARQYPWGTVQVENENHCDFVKLREML 283 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH- 379 + + L + L + + F+ + K ++ RQ L + Q Sbjct: 284 VRTNMEDLREQTHSRHYELYRRMRLEQMGFSDLGTDNKPVSFQETYEQKRQEHLAELQRK 343 Query: 380 ---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 + Q+ ++ E KE LH + K + +++ R+E + + Sbjct: 344 EDEMRQMFVVRVKDKEAELKEAEKELHAKFDALKKQHAEEKRKLEEDRKRLEDDMRRLAE 403 Query: 437 SCHTSVSITTRILQSFAYKNTLKR 460 + +Q+ ++ TL + Sbjct: 404 KK-----AMVQQMQTHSHTLTLGK 422 >gi|326676547|ref|XP_003200605.1| PREDICTED: tripartite motif-containing protein 16 [Danio rerio] gi|94732192|emb|CAK10889.1| novel protein [Danio rerio] Length = 561 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 19/201 (9%), Positives = 47/201 (23%), Gaps = 8/201 (3%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D + ++ NL + LI + + Sbjct: 97 CDSCTGRKHKAIKSCLVCLNSYCQNHLEQHENLFKGKRH---NLIDATGRLQEMICRKHD 153 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + + R + ++ + + ++ Q+ Q Sbjct: 154 KLLEIYCRTDQRCICMLCMVDEHKDHETVSTSAERTEKQKQLGEI--QRKFQQQIQKRER 211 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 K Q + + VK H R K+ + L + + + I+ + Sbjct: 212 KLQELNEAVKIHERSAQTAVKDSERVFSELIRSIERKRSEVTQMIRDQEKITVGRAEGLL 271 Query: 436 KSCHTSVSITT---RILQSFA 453 K + L+ + Sbjct: 272 KQLQQEIDDLRGKNAKLEQLS 292 >gi|34328010|dbj|BAA23698.3| KIAA0402 [Homo sapiens] Length = 3284 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 + + + L+ + ++ S + + N + Sbjct: 765 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 824 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 +L +LE + + + + SD +H Q R+ Q + Sbjct: 825 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 883 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + L +E T+ +++ + L + + T Sbjct: 884 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 943 Query: 447 RILQS 451 L++ Sbjct: 944 AELEA 948 >gi|332208869|ref|XP_003253534.1| PREDICTED: centrosomal protein of 164 kDa [Nomascus leucogenys] Length = 1422 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 745 AKHREVVSSLQKKIEEAQQKEEAQLQKCLGQVEHRVHQKAYHVAEYEHELSSLL----RE 800 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 801 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 860 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 861 LETVRQEQHKRLEDLRRRHREQERKLQDL 889 >gi|309354987|emb|CAP39769.2| CBR-LIN-5 protein [Caenorhabditis briggsae AF16] Length = 808 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 22/182 (12%), Positives = 55/182 (30%), Gaps = 6/182 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 ++ ++L + RL I L + + +N + + L R + L L Sbjct: 417 QDADNAMTTLGDERERLKQTISTLQREHVERMNMSKSTIERIQRELEEERKDKNELSSLL 476 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 E + + + + + +K Q + + + E R I K Sbjct: 477 NELNEKALGTDKETHDQAEGFLSARACLEGAKKRIQQLELELKGKEGFNAVLERQIEKSK 536 Query: 396 KEKIAILHMLRE------QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + L + + K + + + I ++ + + I + L Sbjct: 537 EILQTELMIREQSAIQFHNVKAELEEQSVNKDREIVLLKENMQNLIARHQNQMEEQQSAL 596 Query: 450 QS 451 ++ Sbjct: 597 KA 598 >gi|149041631|gb|EDL95472.1| rCG58154, isoform CRA_b [Rattus norvegicus] Length = 664 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 19/177 (10%), Positives = 52/177 (29%), Gaps = 11/177 (6%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 LEA ++ ++ + K + L D R + + + Sbjct: 275 YLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEE 334 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 I L ++++N+ QQ + Q L+ + + + Sbjct: 335 -------QLIIIRSRLDQSMEENQDLKDALQQRLTQQDTSVLQLKQELLRANMDKDELHN 387 Query: 407 EQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + + ++ + + + + ++ + R L +Y+ L+R Sbjct: 388 QNVDLQRKLDERNRLLGEYKKDLGQK-DRLLQQQQAKLEDALRKLSDASYQQVDLER 443 >gi|83320096|ref|NP_001032743.1| dixin [Rattus norvegicus] gi|123779818|sp|Q2VUH7|DIXC1_RAT RecName: Full=Dixin; AltName: Full=Coiled-coil protein DIX1; Short=Coiled-coil-DIX1; AltName: Full=DIX domain-containing protein 1 gi|62199652|gb|AAX76925.1| dixin [Rattus norvegicus] Length = 674 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 16/189 (8%), Positives = 49/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LEA ++ ++ + K + L D R + Sbjct: 280 YLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEE 339 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + + + + + QQ + Q L+ Sbjct: 340 QLIIIRSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 397 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 398 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKDLGQK-DRLLQQQQAKLEDALRKLSDA 456 Query: 453 AYKNT-LKR 460 +Y+ L+R Sbjct: 457 SYQQVDLER 465 >gi|268590142|ref|ZP_06124363.1| cell division protein MukB [Providencia rettgeri DSM 1131] gi|291314416|gb|EFE54869.1| cell division protein MukB [Providencia rettgeri DSM 1131] Length = 1480 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 14/178 (7%), Positives = 47/178 (26%), Gaps = 9/178 (5%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEH 337 + L L + + + + L AL + + ++ + + + Sbjct: 425 RARELCQLPELSIDNADEWLDTFEAREQQATQALLALEQKMSVADAAHSQFEQAYQLVRN 484 Query: 338 NLE--IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + + L +Q R + E QQ + K Sbjct: 485 MVGEVSRSDAYQQARALLRDWSSQQHLADRVQPLRMQLSELQQRLNSQQNAERLLAEFCK 544 Query: 396 KEKIAILHMLREQTKNRIFYLHTHI-----KKLITRIEFILSHKIKSCHTSVSITTRI 448 + + + + + + R++ + +++ +S + Sbjct: 545 RYGQSYEPDELDALMAELEAQQEELSIGVNESGERRMQ--MRQELEQIRQRISQLSSK 600 >gi|195163982|ref|XP_002022828.1| GL14776 [Drosophila persimilis] gi|194104851|gb|EDW26894.1| GL14776 [Drosophila persimilis] Length = 1036 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 57/181 (31%), Gaps = 11/181 (6%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + V + N E + + K +L N Q + R+ + Sbjct: 654 GDRKVFDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 713 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 ++ RK +H H+ Q+ R + +K+Q +EQ L++ Sbjct: 714 AQKQYIELEMRKFKRKRMVVHH----------EHDDQQLRDELSKKEQQLEQAHAMLLKH 763 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHT-HIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 ++ + + + + +I H + ++ I ++ + + L Sbjct: 764 HEKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELLRKHALELRQQPKSL 823 Query: 450 Q 450 + Sbjct: 824 K 824 >gi|88810520|ref|ZP_01125777.1| pyochelin synthetase F [Nitrococcus mobilis Nb-231] gi|88792150|gb|EAR23260.1| pyochelin synthetase F [Nitrococcus mobilis Nb-231] Length = 1833 Score = 37.8 bits (86), Expect = 4.6, Method: Composition-based stats. Identities = 22/213 (10%), Positives = 55/213 (25%), Gaps = 10/213 (4%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 H+ + +AD + V++ + LE L + +T Sbjct: 122 HDMLRAVI--SADGYQRVLPEVPCYRIAVQDGRDWAPSELEQHLRASRAEMDHRLYDTGK 179 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD-FLIHNIQ 367 L +R R + L F+ + ++ + + Sbjct: 180 W-------PLFELRLTRTRGGDILHFSLDALIADWASAGILFSELNQILRGHGDTLPALD 232 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + L ++ + V + + + ++ R+ Sbjct: 233 IRFRDYLLAERRLRDGVAYRRARDYWMDRVEALPSAPELPLLSRTAVENRARFRRHHWRL 292 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 ++ + S+T + AY L+R Sbjct: 293 PRGHWEALRRQASMFSLTASNVVLAAYVAVLQR 325 >gi|321157879|emb|CBZ05906.1| putative transcriptional regulator of the TetR family [Pseudomonas extremaustralis] Length = 202 Score = 37.8 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 17/116 (14%), Positives = 37/116 (31%), Gaps = 7/116 (6%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 F + + + H H+ H R++F + L L + Sbjct: 54 FERFQSELAPLLDPPAEAQLEAHDYWLFLHLIVERMAHYRFLFQDLSNLAGRLPKLAKGM 113 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI-----LQSFAYKNTLKR 460 ++ + L + L+ R++ ++ S ++ L S Y+ L R Sbjct: 114 RHLLTALKRTLASLLARLQAA--GQLVSDTQALGQLVEQITLTLLFSLDYQRILDR 167 >gi|269303263|gb|ACZ33363.1| single-strand binding protein [Chlamydophila pneumoniae LPCoLN] Length = 159 Score = 37.8 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 7/64 (10%) Query: 58 KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--F-----PGSSKYQIIIESLIP 110 KD IW +K+ ++G +V G I+ + S I ++SL Sbjct: 38 KDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKF 97 Query: 111 SGSG 114 S G Sbjct: 98 SPFG 101 >gi|15618301|ref|NP_224586.1| single-stranded DNA-binding protein [Chlamydophila pneumoniae CWL029] gi|15835919|ref|NP_300443.1| single-strand DNA-binding protein [Chlamydophila pneumoniae J138] gi|16752652|ref|NP_444917.1| single-strand DNA-binding protein [Chlamydophila pneumoniae AR39] gi|33241731|ref|NP_876672.1| single-strand DNA-binding protein [Chlamydophila pneumoniae TW-183] gi|6647829|sp|Q9Z8F7|SSB_CHLPN RecName: Full=Single-stranded DNA-binding protein; Short=SSB; AltName: Full=Helix-destabilizing protein gi|4376665|gb|AAD18530.1| SS DNA Binding Protein [Chlamydophila pneumoniae CWL029] gi|7189295|gb|AAF38218.1| single-strand binding protein [Chlamydophila pneumoniae AR39] gi|8978758|dbj|BAA98594.1| SS DNA binding protein [Chlamydophila pneumoniae J138] gi|33236240|gb|AAP98329.1| putative ssDNA binding protein [Chlamydophila pneumoniae TW-183] Length = 160 Score = 37.8 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 7/64 (10%) Query: 58 KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--F-----PGSSKYQIIIESLIP 110 KD IW +K+ ++G +V G I+ + S I ++SL Sbjct: 39 KDETVWCKCNIWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGSPQSSLVISVDSLKF 98 Query: 111 SGSG 114 S G Sbjct: 99 SPFG 102 >gi|288574754|ref|ZP_06393111.1| protease Do [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570495|gb|EFC92052.1| protease Do [Dethiosulfovibrio peptidovorans DSM 11002] Length = 465 Score = 37.8 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPP 504 G+ + + +T +A I + DG+ +A ++ K P Sbjct: 95 GF-IV-SEDGKILTNNHVVADADTITVTLSDGRTFDAKIVGKDPT 137 >gi|187955498|gb|AAI46853.1| Benzodiazapine receptor (peripheral) associated protein 1 [Homo sapiens] Length = 1857 Score = 37.8 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497 >gi|33112218|sp|O73683|A4_TETFL RecName: Full=Amyloid beta A4 protein; AltName: Full=ABPP; Short=APP; AltName: Full=Alzheimer disease amyloid A4 protein homolog; Contains: RecName: Full=Beta-amyloid protein; AltName: Full=A-beta; AltName: Full=Beta-APP; Flags: Precursor gi|3093586|gb|AAC41275.1| amyloid precursor protein [Tetraodon fluviatilis] Length = 780 Score = 37.8 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 26/242 (10%), Positives = 68/242 (28%), Gaps = 10/242 (4%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPI-----ISAIGHETDWTLADYAADLRAPTPTGAAE 272 GG ++ +F E ++ +S +P A+ H + AD + E Sbjct: 359 GGCGGNMNNFESEEYCLSVCSSVVPTDMPSSPDAVDHYLETP-ADENEHAHFQKAKESLE 417 Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 + R + R K + + + +Q + R +L Sbjct: 418 AKHRERMSQVMREWEEAERQAKNLPR--ADKKIVIQRFQEKVEALEQEAASERQQLVETH 475 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 L R + H ++++ +Q+ + +K Sbjct: 476 MARVEALLNDRRRLALENYLTALQQDPPRPRHVFSLLKKYVRAEQKDRQHTLKHFEHVRM 535 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI--LSHKIKSCHTSVSITTRILQ 450 ++ K+ I + + ++ + L + +++ + + L Sbjct: 536 VDPKKAAQIRPQVLTHLRVIEERMNQSLGLLYKVPGVADDIQDQVELLQREQAEMAQQLA 595 Query: 451 SF 452 + Sbjct: 596 NL 597 >gi|119776443|ref|YP_929183.1| hypothetical protein Sama_3311 [Shewanella amazonensis SB2B] gi|119768943|gb|ABM01514.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 483 Score = 37.8 bits (86), Expect = 4.7, Method: Composition-based stats. Identities = 17/173 (9%), Positives = 46/173 (26%), Gaps = 3/173 (1%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 + P + +E + +N R + + +S + + + Sbjct: 312 SQQHNPQVRSRELSQSREQEFKARMNSSERRFENNGNSSRERDVGNSSRERDMGHQSHDR 371 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + R + ++ R+ + F Q+ RQ E+Q+ + Sbjct: 372 ELRQQLNSRERADSRERMDN---RERMESRERSQPQQRGFEQREPQRERQQFQERQRDAQ 428 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 + + ++E R+Q + + R + Sbjct: 429 PAQPREQQVQRERQREAQHDARQQRQQPREHQQPQRERPQPQRERHNDHPRER 481 >gi|332252671|ref|XP_003275477.1| PREDICTED: LOW QUALITY PROTEIN: putative golgin subfamily A member 6D-like [Nomascus leucogenys] Length = 722 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 10/180 (5%), Positives = 46/180 (25%), Gaps = 6/180 (3%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + + +++LS + ++ Sbjct: 233 EYSYHIKAERARWQERMRKMSVETLTLKEEKKRDIHRIEELERSLSQLQNQMAEPQSLAP 292 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + + + ++ Q L Q ++ + L ++ Sbjct: 293 PAGTSELEQLQDEAKQLRKEVEVLEGKLQSQVENNQALSLQSKEQKQRLREQEERMLWER 352 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIE------FILSHKIKSCHTSVSITTRILQ 450 E++ + ++ + + ++K R+ +++ + L+ Sbjct: 353 ERLCETNKKLQEQQEMLQEKGDRLQKQEQRLRKQEGWLQKEEGRLRKEEERLRKQEGRLR 412 >gi|261821331|ref|YP_003259437.1| cell division protein MukB [Pectobacterium wasabiae WPP163] gi|261605344|gb|ACX87830.1| chromosome segregation and condensation protein MukB domain protein [Pectobacterium wasabiae WPP163] Length = 1479 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 16/177 (9%), Positives = 44/177 (24%), Gaps = 5/177 (2%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + L +L A + + K +L L + + + + + Sbjct: 424 ERARTLCQLTDLTADNADEWLDSYHAKEQEATDILLMLEQKLSVADAAHGQFEEAYQLVS 483 Query: 337 HNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 I + + + + +Q R + E +Q + + Sbjct: 484 KIAGAINRNEAWQVARDLLRDSASQRYQAERVQPLRMRLSELEQRLREQQDAERLLQDFS 543 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRI 448 K+ E + + + L+ L +++ + T Sbjct: 544 KRNGQDYQPEELESLQQELDARIDTLSSLVAEAGERRMALRQELEQTQQRIQKLTTR 600 >gi|296122713|ref|YP_003630491.1| metal-dependent phosphohydrolase HD sub domain protein [Planctomyces limnophilus DSM 3776] gi|296015053|gb|ADG68292.1| metal-dependent phosphohydrolase HD sub domain protein [Planctomyces limnophilus DSM 3776] Length = 328 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 53 AYF--SLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIP 110 Y L+D I+ +W + + + G V GK+ F Q+I+ P Sbjct: 34 LYLNVDLRDKSGVINGRMWNVSEESVA-HIQAGQYVRVRGKVQLF--QGVLQLILTGAHP 90 >gi|170692134|ref|ZP_02883297.1| chromosome segregation protein SMC [Burkholderia graminis C4D1M] gi|170142564|gb|EDT10729.1| chromosome segregation protein SMC [Burkholderia graminis C4D1M] Length = 1172 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 49/383 (12%), Positives = 109/383 (28%), Gaps = 20/383 (5%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139 PE G + G + T Q+ +G +E +++ + L +D+ K Sbjct: 629 PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685 Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIF---PVKVQGDECPKEIANAILQ 196 V + + L++ + + + +I + + Sbjct: 686 AAIRAEAAHTQAAQVLTDVRQQAERATQRVHALQLDVLKLTQAHERYTQRSTQIREELEE 745 Query: 197 LNTLKEGRTCPRPDI-IILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDWT 254 +N + + R + R G + +L F D + + + + D Sbjct: 746 INAQIDEQRALRAESEANFERYDGELAELQARFEDHQLAFEALDEELTTARGQARDLDRA 805 Query: 255 LAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 D +AA A E + +LE + + L L Sbjct: 806 ATDARFAARNMAARIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDALD 865 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 ++ L +R LD L +L E + + ++ +++ Sbjct: 866 IRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAAR 920 Query: 373 ILEKQ---QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + +Q Q V + L K + L + N I L + ++ Sbjct: 921 LNGEQFVEQLAAAGVDEAELQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDELKA 980 Query: 430 ILSHK--IKSCHTSVSITTRILQ 450 K + + ++ L+ Sbjct: 981 ATERKTFLDAQSADLTSAIETLE 1003 >gi|171906559|ref|NP_004749.2| peripheral-type benzodiazepine receptor-associated protein 1 isoform a [Homo sapiens] gi|145559522|sp|O95153|RIMB1_HUMAN RecName: Full=Peripheral-type benzodiazepine receptor-associated protein 1; Short=PRAX-1; AltName: Full=Peripheral benzodiazepine receptor-interacting protein; Short=PBR-IP; AltName: Full=RIMS-binding protein 1; Short=RIM-BP1 Length = 1857 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497 >gi|47215978|emb|CAF96380.1| unnamed protein product [Tetraodon nigroviridis] Length = 1386 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 18/194 (9%), Positives = 64/194 (32%), Gaps = 17/194 (8%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + + + L ++R ++ +L + + L Q L+ + + Sbjct: 1008 MLEEQLQVLAQLEVAIREHKQEMVRKVESLQQSLEAKERELRQVQQELADKKLKESHRVC 1067 Query: 334 ELEHNLEII---IFRKYRHFNHIINRIKSDFLIHNIQK-----------NRQHILEKQQH 379 + LE + + + ++ S L ++ +++ + + Sbjct: 1068 ACQQKLERLAEELVEAQNRCEALTRQLDSHKLHSKEKEVQLCAVEKDLASKEACWLELEA 1127 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL---SHKIK 436 Q L ++E+ +QT+ ++ + + + ++ L ++++ Sbjct: 1128 ELQGTITSLEKELELEREEHNRELESLQQTRGQLLKVSSTMSSTQDKLSAKLDQSQNQLE 1187 Query: 437 SCHTSVSITTRILQ 450 + T+ L+ Sbjct: 1188 QARSQFQQTSSQLE 1201 >gi|125982899|ref|XP_001355215.1| GA12831 [Drosophila pseudoobscura pseudoobscura] gi|54643528|gb|EAL32272.1| GA12831 [Drosophila pseudoobscura pseudoobscura] Length = 1034 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 57/181 (31%), Gaps = 11/181 (6%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + V + N E + + K +L N Q + R+ + Sbjct: 652 GDRKVFDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQ 711 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 ++ RK +H H+ Q+ R + +K+Q +EQ L++ Sbjct: 712 AQKQYIELEMRKFKRKRMVVHH----------EHDDQQLRDELSKKEQQLEQAHAMLLKH 761 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHT-HIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 ++ + + + + +I H + ++ I ++ + + L Sbjct: 762 HEKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELLRKHALELRQQPKSL 821 Query: 450 Q 450 + Sbjct: 822 K 822 >gi|240949653|ref|ZP_04753988.1| cell division protein MukB [Actinobacillus minor NM305] gi|240295911|gb|EER46587.1| cell division protein MukB [Actinobacillus minor NM305] Length = 1492 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 15/161 (9%), Positives = 49/161 (30%), Gaps = 3/161 (1%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E ++ ++ K++ + L N+++ L+ + +LE + Sbjct: 530 EQKMQAAQAVGLRQKLHEIEQRLHQQQNAERLLAEFNQKAQT-ELTDAESLESYFEEQQA 588 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + + + Q+ ++ L +Q + E Sbjct: 589 RLEDLEAELAEFVEVRSTQRQQREQLNQQYNQLAKNAPAWHTAQSALARLEEQCGEKFEA 648 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 +++ + ++ T + R +L ++ + L Sbjct: 649 SQSVMQFMQTMLS--KEREATLLRDELARKEQQLDEQISRL 687 >gi|229527911|ref|ZP_04417302.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae 12129(1)] gi|229334273|gb|EEN99758.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae 12129(1)] Length = 570 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L ++Q KQQ + Q + + Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256 Query: 448 IL 449 L Sbjct: 257 KL 258 >gi|224162362|ref|XP_002199997.1| PREDICTED: similar to hCG2043248, partial [Taeniopygia guttata] Length = 936 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 42/348 (12%), Positives = 98/348 (28%), Gaps = 35/348 (10%) Query: 115 TLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDI--LQRISCRFPL 172 L + ++++ L + + + + +P + R L I R + Sbjct: 299 ALSCQRDILQEQVKHHKLLNQKIISLLYALPTNVGNSQGKGRLGQRRAKRLVYIFRRAVI 358 Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 V+ + A A I + G + F +E + Sbjct: 359 AVL---------AAHRLRALARHSCTFFVWTDGSRGCTGIQVCVGESRGRHVSRFEEEGV 409 Query: 233 -----VRAIANSSIPI-ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLI 286 + + +S++ I + E + L + + + + + I Sbjct: 410 DCIEALDWLTSSNLYTAIVSSISELEDVLCKQDVHSWLSGHSLISAARNCFAKLMDNLSI 469 Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-LEIIIFR 345 +E + ++L L + + DRLP L+ IF Sbjct: 470 LMETVQGKPCGGRAYLERDSLIQRLARGLHRVNAQALEAGLYDRLPSTRNIAILQQEIFE 529 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + ++S L + + R E ++ E+ + + L+ K +H Sbjct: 530 FSQRL--HAAEVESRSLQLQLAECRWAFNEMRKDAEKAHRLQEQLNELQHKISQDNIHEE 587 Query: 406 REQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E R E + ++ + + L+S + Sbjct: 588 LENALQR---------------EQEVRLLLQEYQRRLQELSNKLESCS 620 >gi|145508383|ref|XP_001440141.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407347|emb|CAK72744.1| unnamed protein product [Paramecium tetraurelia] Length = 2778 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 20/194 (10%), Positives = 55/194 (28%), Gaps = 7/194 (3%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT-LSCSRYRLD 329 E + + I + + + + + Sbjct: 656 KEFVASSQFQDYDQAKIYLQTIQQICKFMESLLHQNKKLFQHLHNFKQSLQIESAHGKFN 715 Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK----NRQHILEKQQHIEQIVK 385 L L+ + F+ + +K D L ++ N+Q Q++ Q K Sbjct: 716 DLLNLWTMILQTTTELDSQQFDQAVFLVKFDQLQQKQEQIIKLNQQIRWPFNQYLSQYFK 775 Query: 386 QHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + + ++ K + +NR L ++K++ + ++ + V Sbjct: 776 MLTQLDTIFQELKTFKTYDSTADPNTQNRYDSLRLNLKQICQSQIQRIKSTLEQYNQGVD 835 Query: 444 ITTRILQSFAYKNT 457 L + ++ + Sbjct: 836 QLQNKLDNQSHLSI 849 >gi|114632697|ref|XP_001136998.1| PREDICTED: similar to protein kinase isoform 2 [Pan troglodytes] Length = 968 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 18/168 (10%), Positives = 45/168 (26%), Gaps = 14/168 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + E +R K + + + LD ++ Sbjct: 651 FQNMLKNRKKEVINEVEKAPKELRKELMKRRKEELAQSQHAQEQEFVQKQQQELDGSLKK 710 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + R + ++ + +H+ EK Q ++Q +K Sbjct: 711 IIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQY------ 764 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 765 --------FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 804 >gi|81295809|ref|NP_006022.3| pericentrin [Homo sapiens] gi|313104312|sp|O95613|PCNT_HUMAN RecName: Full=Pericentrin; AltName: Full=Kendrin; AltName: Full=Pericentrin-B Length = 3336 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 + + + L+ + ++ S + + N + Sbjct: 738 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 797 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 +L +LE + + + + SD +H Q R+ Q + Sbjct: 798 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 856 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + L +E T+ +++ + L + + T Sbjct: 857 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 916 Query: 447 RILQS 451 L++ Sbjct: 917 AELEA 921 >gi|71414609|ref|XP_809401.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70873776|gb|EAN87550.1| hypothetical protein Tc00.1047053511523.30 [Trypanosoma cruzi] Length = 1116 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 18/201 (8%), Positives = 46/201 (22%), Gaps = 3/201 (1%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY--KINTL 307 D + + T A + ++ + + R Sbjct: 831 HLDSVIEEQLGGKCHQKYTEKLNRAHECLLREREKSELRRKQMESALERKRSKSEASRMA 890 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 N L + R R + + + + ++I + Sbjct: 891 REQEVQEKNKKLLLRQHQSRAVRDKIQQARDDFNETIQAQMLLQEMESKITRQVREEVMS 950 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 RQ Q + + K+ K+ RE R L ++ + + Sbjct: 951 FRRQETDRLTQRLCEERKRREAAAIQAAKKNERRSVQ-RELCVQRTKELQESRRRHVMQK 1009 Query: 428 EFILSHKIKSCHTSVSITTRI 448 + + + + + Sbjct: 1010 QLDMQQRQQRAAERLERAREQ 1030 >gi|321452419|gb|EFX63808.1| hypothetical protein DAPPUDRAFT_118832 [Daphnia pulex] Length = 841 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 45/165 (27%), Gaps = 3/165 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + +AL + L +R R + L R Sbjct: 217 RQQHQARKRAADDTETAEEQRARLQAQALR--KKYLRRDESEAERSSRLQDQALRQKSLR 274 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAILHM 404 +R++ L + + ++ E+ ++ Q +Q + E + L Sbjct: 275 NEESEAEKSSRLREQALRQHSLRKKESEAERSARLQDQAQRQKSLRNEESEAENSSRLRE 334 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + K R + + +++ T + R L Sbjct: 335 QTLRQNSLRKEESEAEKWARQRTQALHQKNLRTKETELGAANRQL 379 >gi|229846773|ref|ZP_04466880.1| cell division protein MukB [Haemophilus influenzae 7P49H1] gi|229810262|gb|EEP45981.1| cell division protein MukB [Haemophilus influenzae 7P49H1] Length = 1510 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 53/158 (33%), Gaps = 9/158 (5%) Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN---LEIIIFRKYRHFNHIINR 356 K + L L +Q + + + L + L+ + H Sbjct: 548 QKLQAQQTPQLRTKLHELEQRYAQQQSAVKLLNDFNQRANLSLQTAEELEDYHAEQEALI 607 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + +NR + +K++++ + +++R + A L L +Q+ R+ + Sbjct: 608 EDISARLSEQVENRSTLRQKRENLTALYDENVRKAPAWLTAQAA-LERLEQQSGERLEHS 666 Query: 417 HTHIKKLITRI----EFILSH-KIKSCHTSVSITTRIL 449 + + +++ E + +++ + L Sbjct: 667 QDVMNFMQSQLVKERELTMQRDQLEQKRLQLDEQISRL 704 >gi|229514608|ref|ZP_04404069.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TMA 21] gi|229348588|gb|EEO13546.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TMA 21] Length = 570 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L ++Q KQQ + Q + + Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256 Query: 448 IL 449 L Sbjct: 257 KL 258 >gi|126327036|ref|XP_001381334.1| PREDICTED: similar to DIX domain containing 1 [Monodelphis domestica] Length = 668 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 24/238 (10%), Positives = 68/238 (28%), Gaps = 13/238 (5%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285 ++ +I ++ + II + G E D + D A +P E + + Q Sbjct: 218 SESIISQSEERADFVIIPSEGQENRTEETDSPFPRDWLAGSPGTYLETSWEDQLLEQQEH 277 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + E +I ++ + + ++L ++ + + Sbjct: 278 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALFEPGANPEEQL-----IIIQSRLDQ 332 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + + + QQ + Q L+ + + + Sbjct: 333 SMEENQDLKKELLKCKQEIRNLQGIK--DALQQRLTQQDTSVLQLKQELLRTNMDKDELH 390 Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + + ++ + + + I+ + R L +Y+ L+R Sbjct: 391 NQNVDLQRKLDERSRLLGEYKKELGQK-DRLIQQHQVKLEEALRKLSEASYQQVDLER 447 >gi|119614874|gb|EAW94468.1| benzodiazapine receptor (peripheral) associated protein 1, isoform CRA_a [Homo sapiens] Length = 1857 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497 >gi|31296687|gb|AAP46636.1|AF515282_1 pericentrin B [Homo sapiens] gi|119629685|gb|EAX09280.1| pericentrin (kendrin), isoform CRA_d [Homo sapiens] Length = 3336 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 + + + L+ + ++ S + + N + Sbjct: 738 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 797 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 +L +LE + + + + SD +H Q R+ Q + Sbjct: 798 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 856 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + L +E T+ +++ + L + + T Sbjct: 857 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 916 Query: 447 RILQS 451 L++ Sbjct: 917 AELEA 921 >gi|4104812|gb|AAD11957.1| peripheral benzodiazepine receptor interacting protein [Homo sapiens] Length = 1857 Score = 37.8 bits (86), Expect = 4.8, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497 >gi|219521686|gb|AAI71787.1| BZRAP1 protein [Homo sapiens] Length = 1848 Score = 37.8 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 19/164 (11%), Positives = 49/164 (29%), Gaps = 13/164 (7%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + K L L + + RL ++ Sbjct: 347 KRKKCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEKEQVEWENAEL 406 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + D + Q + + +Q ++ + + R LE + + A L + +Q Sbjct: 407 RGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQQLEVEHEQARLSLREKQ 466 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + R R++ + + +V + L S Sbjct: 467 EEVR-------------RLQQAQAEAQREHEGAVQLLESTLDSM 497 >gi|300021639|ref|YP_003754250.1| methyl-accepting chemotaxis sensory transducer [Hyphomicrobium denitrificans ATCC 51888] gi|299523460|gb|ADJ21929.1| methyl-accepting chemotaxis sensory transducer [Hyphomicrobium denitrificans ATCC 51888] Length = 567 Score = 37.8 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 17/164 (10%), Positives = 53/164 (32%), Gaps = 13/164 (7%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 + + + ++E+ + + LR + A ++ +T Sbjct: 20 HEAAAQCGHLAAQTLDAAETQNRLIEETNQRTSSLAESLRAANQGLETCSANATNIQTET 79 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR---ILQSFAYKNTLK------- 459 ++ + + + + + I+S K + ++ ++ + ++ Sbjct: 80 RDALRSMSDALDGDFSALTEIISRKSEDTKKILATIVEIGHQIKILSINARIEAARAGEA 139 Query: 460 -RGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKA 502 RG+ + + + A + +L+NF D A + A Sbjct: 140 GRGFAVVANEVGRLAETTMDHAKEAEVLLNFAD--VEAQIDKSA 181 >gi|229522777|ref|ZP_04412191.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TM 11079-80] gi|229339994|gb|EEO05002.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae TM 11079-80] Length = 570 Score = 37.8 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L ++Q KQQ + Q + + Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256 Query: 448 IL 449 L Sbjct: 257 KL 258 >gi|157363099|ref|YP_001469866.1| hypothetical protein Tlet_0232 [Thermotoga lettingae TMO] gi|157313703|gb|ABV32802.1| hypothetical protein Tlet_0232 [Thermotoga lettingae TMO] Length = 384 Score = 37.8 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 13/177 (7%), Positives = 46/177 (25%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 K + I K L ++ + ++ + Sbjct: 82 DKLGNLEKNQQNLSTKIMGIEAAYKTYEQRLKDFEMSVASLQSQTDKLSQQIYAQLHKEI 141 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + + +++R+++ + + + + ++ L+ E Sbjct: 142 EEILNQHQNQISRLEPVLSRVEALEKLASSLQKSIESTDSNLNLLSSKIAELQANQTELS 201 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L + I+KL + ++ + K ++ L + + Sbjct: 202 RSFSSSENLLNSLLKNVNENSQSIQKLSEQFNVQMNAQGKLYDQKITELAARLDALS 258 >gi|153825763|ref|ZP_01978430.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MZO-2] gi|149740602|gb|EDM54713.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae MZO-2] Length = 570 Score = 37.8 bits (86), Expect = 4.9, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L ++Q KQQ + Q + + Sbjct: 138 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 196 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRISALQHRLDHKLMRIEQLKQQRKQRSAALQK 256 Query: 448 IL 449 L Sbjct: 257 KL 258 >gi|302846877|ref|XP_002954974.1| hypothetical protein VOLCADRAFT_95794 [Volvox carteri f. nagariensis] gi|300259737|gb|EFJ43962.1| hypothetical protein VOLCADRAFT_95794 [Volvox carteri f. nagariensis] Length = 3311 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 13/172 (7%), Positives = 48/172 (27%), Gaps = 4/172 (2%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 ++ L + + + + +L + + +L L Sbjct: 1920 LTACEARATSLERQLQKRQRQAEDREATLDGEIRALQEHAEDLERQLRGLQVSEREARRN 1979 Query: 342 IIFRKYRHFNHIINRIKSDFLI-HNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEK 398 R + + + R+ + E++ + +Q + ++ + Sbjct: 1980 QDADMERQLEQLREERTRLRDEGRQLDERRRQLDEQKWQLDEQQRQLDDRQRQLDNRQRQ 2039 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + ++++ + +++ S K+ V + R L Sbjct: 2040 LEEQQQQVQAAQSKLDERSETLAARQRQLDERAS-KLDERSQQVELQARRLD 2090 Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 11/162 (6%), Positives = 42/162 (25%), Gaps = 3/162 (1%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 E + + + Q + E + + + Sbjct: 2014 EQKWQLDEQQRQLDDRQRQLDNRQRQLEEQQQQVQAAQSKLDERSETLAARQRQLDERAS 2073 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + +++ + + E+ + ++ +++ LE + + + Sbjct: 2074 KLDERSQQVELQA--RRLDDQARLQDERGRQLDDLLRWAEADQRLENRPEGQAKQVDNTP 2131 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + K ++E L +++ + R L Sbjct: 2132 QSSEQEERARQLDKREGQLEE-LQRQLRLQRMQLDERARQLD 2172 >gi|295101009|emb|CBK98554.1| exonuclease RecJ [Faecalibacterium prausnitzii L2-6] Length = 709 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 6/103 (5%) Query: 52 HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTF-PGSSKYQII--IESL 108 H L+ +S I A+ + ++ + G ++ + Q+ I L Sbjct: 534 HCRLRLRQGNSSIYAVWFGMHPEQVPYS--TGDVVDAAISLSVYDSPRGA-QLSGRIIEL 590 Query: 109 IPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVI 151 P+G G + L + + K I I + Sbjct: 591 HPAGLGNTAAEQAALVQALRRGTPLTPEQKESIAPERSHIITV 633 >gi|119629684|gb|EAX09279.1| pericentrin (kendrin), isoform CRA_c [Homo sapiens] Length = 3139 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 + + + L+ + ++ S + + N + Sbjct: 620 TELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTIINKFELREAEMR 679 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 +L +LE + + + + SD +H Q R+ Q + Sbjct: 680 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 738 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + L +E T+ +++ + L + + T Sbjct: 739 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELQLLQERHQQQLLSVT 798 Query: 447 RILQS 451 L++ Sbjct: 799 AELEA 803 >gi|114365|sp|P16602|ATI_COWPX RecName: Full=A-type inclusion protein; Short=ATI gi|221141|dbj|BAA00222.1| A-type inclusion protein [Cowpox virus] Length = 1284 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 23/171 (13%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419 L +++ R + E ++ + R + ++ R ++ ++RI L Sbjct: 680 LERQLRECRGNATEIS-RLQYRITDLERQLNDCRRNNENNADTEREMQRLRDRITDLERQ 738 Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + E + +++ + R L KR D N T Sbjct: 739 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------DGNG---TSSE 783 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + R+ D + + + +K + K +L + + Q L Sbjct: 784 EVN---RLKTRIRDLERSLEICSKDESELYSAYKSELGRAREQISNLQESL 831 >gi|188992504|ref|YP_001904514.1| hypothetical protein xccb100_3109 [Xanthomonas campestris pv. campestris str. B100] gi|167734264|emb|CAP52474.1| hypothetical protein predicted by Glimmer/Critica [Xanthomonas campestris pv. campestris] Length = 246 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 3/133 (2%) Query: 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267 +++ARGGG + + + RA+ + +P A+GH D L D AD TP Sbjct: 94 GVKGLVIARGGGERLETIG-DSRNVTRALIETGLPFYVALGHANDVLLLDKHADDVFLTP 152 Query: 268 TGAAEMA--VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 + + + +I+L + L + + ++ L S+ Sbjct: 153 SDFGHRLRDCLDAAQEAEDARAEASDAEDKLIQLSTKLDRRESELDETRRHLNELLQQSK 212 Query: 326 YRLDRLPRELEHN 338 L EL Sbjct: 213 LNGQGLKAELRQW 225 >gi|20178521|ref|NP_619942.1| Ati or CPXV158 protein [Cowpox virus] gi|20153139|gb|AAM13600.1|AF482758_151 Ati or CPXV158 protein [Cowpox virus] Length = 1284 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 23/171 (13%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419 L +++ R + E ++ + R + ++ R ++ ++RI L Sbjct: 680 LERQLRECRGNATEIS-RLQYRITDLERQLNDCRRNNENNADTEREMQRLRDRITDLERQ 738 Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + E + +++ + R L KR D N T Sbjct: 739 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------DGNG---TSSE 783 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + R+ D + + + +K + K +L + + Q L Sbjct: 784 EVN---RLKTRIRDLERSLEICSKDESELYSAYKSELGRAREQISNLQESL 831 >gi|332023288|gb|EGI63542.1| hypothetical protein G5I_08060 [Acromyrmex echinatior] Length = 2241 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 17/197 (8%), Positives = 59/197 (29%), Gaps = 12/197 (6%) Query: 269 GAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL 328 + S + + + + + P+ + ++ Sbjct: 295 QLVYVPAETLAQRGQSKKGRGRKQYPVRQQHSQRENQASIDQTSLSPDQEAFARQVLQQI 354 Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + +E L+ +++ N ++ + R+ L +Q+ ++ K+ Sbjct: 355 QKEHQETAQFLKEERAKEFTRLNEEQKALERKTRLQQEALQREQELLRQKEADKKRKELE 414 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS---------HKIKSCH 439 R + ++ ++ + RE+ + + +L + E K++ Sbjct: 415 RLEEMARQRELDRIRDAREKQRQE-ELERRRLSELRIKEEKRREEEARQREEKQKLELEQ 473 Query: 440 TSV--SITTRILQSFAY 454 + S L++ + Sbjct: 474 QRILESQQEEQLRATSP 490 >gi|116073799|ref|ZP_01471061.1| chromosome segregation protein SMC [Synechococcus sp. RS9916] gi|116069104|gb|EAU74856.1| chromosome segregation protein SMC [Synechococcus sp. RS9916] Length = 1202 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 47/142 (33%), Gaps = 3/142 (2%) Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 +A ++ + SR RL + +E R R + ++I +K + Sbjct: 378 QACREAEAAVEVSRRRLGDVAGRSGTWMEEQRQRSQRRLE-LQSQITPLQEEQQQRKAKL 436 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI--EF 429 +++ Q + ++ + L + + +++L+ + + Sbjct: 437 QQDQERLLELQQELEQDGSEDQRVQDDLTKLEAEWQSLLQALQSGKEELQQLVESVAVQQ 496 Query: 430 ILSHKIKSCHTSVSITTRILQS 451 +++ T + L+S Sbjct: 497 RTRSRLEQEQTRLERDIAKLES 518 >gi|290491232|ref|NP_001166491.1| STE20-like serine/threonine-protein kinase [Cavia porcellus] gi|81908391|sp|O55092|SLK_CAVPO RecName: Full=STE20-like serine/threonine-protein kinase; Short=STE20-like kinase; AltName: Full=STE20-related serine/threonine-protein kinase; Short=STE20-related kinase gi|2911114|dbj|BAA24930.1| serine/threoine kinase [Cavia porcellus] Length = 1231 Score = 37.8 bits (86), Expect = 5.0, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 8/129 (6%) Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + R + L + + + ++ + + + +I R+ + KQQ + Sbjct: 939 ELMKRRKEELAQSQHVQEQDFVQKQQQELDGSLKKIIQQQKAELANIERECLNNKQQLMR 998 Query: 382 QIVKQHLRYIFLEKKEKIAIL--------HMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 +EK +L M R Q R +++ R+ L + Sbjct: 999 AREAAIWELEERHLQEKHQLLKQQLKDQYFMQRHQLLKRHEKETEQMQRYNQRLIEELKN 1058 Query: 434 KIKSCHTSV 442 + + Sbjct: 1059 RQTQERARL 1067 >gi|302836560|ref|XP_002949840.1| hypothetical protein VOLCADRAFT_117392 [Volvox carteri f. nagariensis] gi|300264749|gb|EFJ48943.1| hypothetical protein VOLCADRAFT_117392 [Volvox carteri f. nagariensis] Length = 1443 Score = 37.8 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 22/213 (10%), Positives = 55/213 (25%), Gaps = 11/213 (5%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 H+ AD + L ++ + + Sbjct: 235 HQQASDGADCVVAKLTADNLVFLMQLKKAEADLAAANQERAQLRVAAEQQRGPWFDQVRA 294 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + + + S Q RL+R E +E + + + + + + + Sbjct: 295 GVEEKVRQSLQRAEELEARLERRAAEHAAQMEAMREQHAKLEEQLGAARQHVQELQSGLA 354 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH--------- 419 + E + + + + E A +L+E ++ Sbjct: 355 SAVKSKECSERLCAAAESAAAELRRELDNLAAENRVLQESMRSMRQECTERWANEQSALG 414 Query: 420 -IKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + L RI+ L + ++ R L + Sbjct: 415 RVNGLEQRIDE-LQQALSQQMARLAALQRQLDT 446 >gi|156359514|ref|XP_001624813.1| predicted protein [Nematostella vectensis] gi|156211614|gb|EDO32713.1| predicted protein [Nematostella vectensis] Length = 436 Score = 37.8 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 15/176 (8%), Positives = 58/176 (32%), Gaps = 6/176 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 ++ N + ++ + + ++K+ + + L + Q+L + ++ Sbjct: 235 MQYAKDRNQFSNDDQKVKELESKYEQWKMQEDENHRRELMSLRQSLQREIQNMSTQNQQE 294 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + L + N + I + + + ++ I ++V+ + Sbjct: 295 KKALTQALADLEYKMNSRPSMIGNIKDEDELDAPPKFQPNNKEEIAEMVRGEFENQLQQV 354 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + +E+ + + ++ K R++ ++ +S L++ Sbjct: 355 R------VQSQEEMQRELRRMNQKWKSKEERLQHEHQKEVVKVQDLLSQYGSKLEA 404 >gi|119610510|gb|EAW90104.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_a [Homo sapiens] Length = 324 Score = 37.8 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 11/169 (6%), Positives = 50/169 (29%), Gaps = 2/169 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 E + ++ S + L L R + +L+ + + + Sbjct: 91 EAEQQRCCVLQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEES 150 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + + + +++ +++ + + R + +++++ Sbjct: 151 QAQLEREKEKSQREAQAAWETQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARY 210 Query: 407 EQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 E + ++ +++ R+ ++ + + LQ + Sbjct: 211 ESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLS 259 >gi|50414437|gb|AAH77721.1| ARHGEF18 protein [Homo sapiens] Length = 1030 Score = 37.8 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 42/136 (30%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + +L + L N ++ ++ ++ + + R + + +F Sbjct: 644 QRIQTLSQLLLNLQAVIAHQDSYVETQRAAIQEREKQFRLQSTRGNLLLEQERQRNFEKQ 703 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 ++ L+ Q EQ + R ++ E+ RE ++ + + Sbjct: 704 REERAALEKLQSQLRHEQQRWERERQWQHQELERAGARLQEREGEARQLRERLEQERAEL 763 Query: 425 TRIEFILSHKIKSCHT 440 R H ++ Sbjct: 764 ERQRQAYQHDLERLRE 779 >gi|320449381|ref|YP_004201477.1| repeat motif-containing protein [Thermus scotoductus SA-01] gi|320149550|gb|ADW20928.1| repeat motif-containing protein [Thermus scotoductus SA-01] Length = 282 Score = 37.8 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 20/172 (11%), Positives = 54/172 (31%), Gaps = 4/172 (2%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 L E +L I ++ + + L N L + + ++E + Sbjct: 66 RLAQTENKLEARIQQVESKLEAQIQQVETRLQNQISQLDAKIWETEDKLEAQIQHVENKL 125 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + + + + +Q + + I Q+ I +++ A +H Sbjct: 126 ETRIQQVESKLEAQIQQVEVRLQNRIQQTEEKLEARIHQVEAHLENQIRETEEKLEAQIH 185 Query: 404 MLREQTKNRIFYLHTHIK----KLITRIEFILSHKIKSCHTSVSITTRILQS 451 + + NRI ++ ++ R+ + + + L+S Sbjct: 186 QVEARLGNRIQQTEEKLEAKIHQVEARLGNRIQQTEEKLEAQIQQVRSELES 237 >gi|198471801|ref|XP_001355729.2| GA14764 [Drosophila pseudoobscura pseudoobscura] gi|198146086|gb|EAL32788.2| GA14764 [Drosophila pseudoobscura pseudoobscura] Length = 1037 Score = 37.8 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 53/157 (33%), Gaps = 4/157 (2%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLS-CSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 R + K L+ + + R R +E + + + ++ + + Sbjct: 179 RTKETKQRDAERALRHQEHLRELARCQQRQRQKARAQEQQRLGKERLRKRQQDEDKAAKE 238 Query: 357 IK--SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 ++ + H I+ R + + E+ ++ R L K+ + L + + + Sbjct: 239 LETLRKDIEHQIKVQRDSEAKWNRIKEERDREIERQTVLRKRGQKEQLEEEERRQRLEVL 298 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 ++L R E L +++ + + L + Sbjct: 299 RQIEEKRELEKRQEEQLKLELEQQRERF-MQHQKLHT 334 >gi|88797157|ref|ZP_01112747.1| hypothetical protein MED297_20027 [Reinekea sp. MED297] gi|88780026|gb|EAR11211.1| hypothetical protein MED297_20027 [Reinekea sp. MED297] Length = 472 Score = 37.8 bits (86), Expect = 5.1, Method: Composition-based stats. Identities = 14/149 (9%), Positives = 30/149 (20%), Gaps = 4/149 (2%) Query: 304 INTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI 363 + L Q L R RL E + + + L Sbjct: 31 WSRWRRQQLLLEEMQQALHQERSLSARLAAENAGLQVQVRQLTELQAQLTAKDQQLNLLQ 90 Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 ++ + + E H + L + + + + + Sbjct: 91 REVRTLESRLADINARAESAKAHHAEQLQLLNDSREQLKRDFGQLANDIFEQKQQRFSEQ 150 Query: 424 ITRIEFIL----SHKIKSCHTSVSITTRI 448 L +I+ V Sbjct: 151 SKASITALLDPFHRQIEQFRQRVDDIHSR 179 >gi|327277612|ref|XP_003223558.1| PREDICTED: dystrobrevin alpha-like [Anolis carolinensis] Length = 768 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 16/154 (10%), Positives = 45/154 (29%), Gaps = 11/154 (7%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N + L + + + S + N ++ RQ I E Sbjct: 445 NPSRLLDSPNRLDEEHRLIARYAARLAAETTSSQTQQRGAPDISFSIDAN-KQQRQLIAE 503 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ + + L +L R+ + Sbjct: 504 LENKNREILQEIQRLRLEHEQASQPTPEKAAQNPTLLAELRLLRQRKDELEQRMSALQES 563 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 564 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 596 >gi|315426595|dbj|BAJ48224.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 419 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 49 SSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106 GH +F + D+ + ++ G L ++ EG V+G + + +E Sbjct: 282 KGGHVFFRVGDDDGEVVCAAYRPTGGLRRVVQQLIEGDVVKVMGAVK--EKPEGLTLNVE 339 Query: 107 SLI 109 + Sbjct: 340 KIE 342 >gi|315425340|dbj|BAJ47006.1| hypothetical conserved protein [Candidatus Caldiarchaeum subterraneum] Length = 422 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 4/63 (6%) Query: 49 SSGHAYFSLKDNHSRIDAIIWK--GTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIE 106 GH +F + D+ + ++ G L ++ EG V+G + + +E Sbjct: 285 KGGHVFFRVGDDDGEVVCAAYRPTGGLRRVVQQLIEGDVVKVMGAVK--EKPEGLTLNVE 342 Query: 107 SLI 109 + Sbjct: 343 KIE 345 >gi|309798023|ref|ZP_07692400.1| phage tail tape measure protein, lambda family [Escherichia coli MS 145-7] gi|308118399|gb|EFO55661.1| phage tail tape measure protein, lambda family [Escherichia coli MS 145-7] Length = 1021 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|282876970|ref|ZP_06285819.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] gi|281300924|gb|EFA93244.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] Length = 358 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 40/132 (30%), Gaps = 9/132 (6%) Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + L + +E R ++ + +I +D ++ + K ++ ++ Sbjct: 99 QQHNQEMQELAELDKQEMENEYQRFADQYSEMKTQISNDSIVAQLTKEQEKTERLLNELK 158 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 Q+ R IA L + + I L R+ L+ + Sbjct: 159 QVKSNDARE--------IARLKKELATVRAVLRSYVMEIDSL-NRLNQNLTKENTRIKGE 209 Query: 442 VSITTRILQSFA 453 R ++ + Sbjct: 210 YEAANRQIEGLS 221 >gi|223930115|gb|ACN24699.1| hypothetical protein lmo1574 [Listeria monocytogenes] Length = 458 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 372 ELQLIINKAE 381 >gi|218703108|ref|YP_002410737.1| putative tail length tape measure protein from putative prophage [Escherichia coli IAI39] gi|218373094|emb|CAR20986.1| putative tail length tape measure protein from putative prophage [Escherichia coli IAI39] Length = 1031 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 572 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 630 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689 Query: 457 TLKR 460 L R Sbjct: 690 VLAR 693 >gi|220908968|ref|YP_002484279.1| 2-alkenal reductase [Cyanothece sp. PCC 7425] gi|219865579|gb|ACL45918.1| 2-alkenal reductase [Cyanothece sp. PCC 7425] Length = 397 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 3/47 (6%) Query: 458 LKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA-IVINKAP 503 L G+ + +T + + + F DG+ A V+ K P Sbjct: 115 LGSGFVI--NPRGLILTNAHVVDQADTVTVTFQDGRILAGRVLGKDP 159 >gi|117626720|ref|YP_860043.1| putative tail component of prophage CP-933K [Escherichia coli APEC O1] gi|115515844|gb|ABJ03919.1| putative tail component of prophage CP-933K [Escherichia coli APEC O1] Length = 1024 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 505 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 564 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 565 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 623 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 624 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 682 Query: 457 TLKR 460 L R Sbjct: 683 VLAR 686 >gi|109113818|ref|XP_001110924.1| PREDICTED: myosin-XVIIIa-like isoform 5 [Macaca mulatta] Length = 2039 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 15/195 (7%), Positives = 60/195 (30%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + L Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTVL 1730 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1851 NMEKLTEERDQRIAA 1865 >gi|22538002|ref|NP_688853.1| prophage LambdaSa2, single-strand binding protein [Streptococcus agalactiae 2603V/R] gi|37999688|sp|Q8DXI7|SSB4_STRA5 RecName: Full=Single-stranded DNA-binding protein 4; Short=SSB 4; AltName: Full=Helix-destabilizing protein 4 gi|22534904|gb|AAN00726.1|AE014276_7 prophage LambdaSa2, single-strand binding protein [Streptococcus agalactiae 2603V/R] Length = 138 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 21/47 (44%), Gaps = 2/47 (4%) Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--FPGSSKYQIIIESL 108 I+ ++W+ + ++G+ + G+I T + +I + + Sbjct: 49 INCVMWRQQAENLANWTKKGMLIGITGRIQTRSYENQQGQRIYVTEV 95 >gi|218561591|ref|YP_002394504.1| tail length tape measure protein from prophage [Escherichia coli S88] gi|218368360|emb|CAR06179.1| putative tail length tape measure protein from putative prophage [Escherichia coli S88] Length = 1031 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 572 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 630 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689 Query: 457 TLKR 460 L R Sbjct: 690 VLAR 693 >gi|24660442|gb|AAH39612.1| MYO18A protein [Homo sapiens] Length = 2002 Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1634 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1693 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1694 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1753 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1754 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1813 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1814 NMEKLTEERDQRIAA 1828 >gi|321451703|gb|EFX63268.1| hypothetical protein DAPPUDRAFT_119365 [Daphnia pulex] Length = 898 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 45/165 (27%), Gaps = 3/165 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + +AL + L +R R + L R Sbjct: 217 RQQHQARKRAADDTETAEEQRARLQAQALR--KKYLRRDESEAERSSRLQDQALRQKSLR 274 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE-QIVKQHLRYIFLEKKEKIAILHM 404 +R++ L + + ++ E+ ++ Q +Q + E + L Sbjct: 275 NEESEAEKSSRLREQALRQHSLRKKESEAERSARLQDQAQRQKSLRNEESEAENSSRLRE 334 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + K R + + +++ T + R L Sbjct: 335 QTLRQNSLRKEESEAEKWARQRTQALHQKNLRTKETELGAANRQL 379 >gi|297579761|ref|ZP_06941688.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae RC385] gi|297535407|gb|EFH74241.1| ribosomal large chain pseudouridine synthase A [Vibrio cholerae RC385] Length = 570 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 31/122 (25%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L I ++Q KQQ + Q + Sbjct: 138 NQQVREQETDPELVELASALKQSQLQAEHELSQRRILHSKQRHFRKQQRL-QAEALPEKE 196 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 197 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 256 Query: 448 IL 449 L Sbjct: 257 KL 258 >gi|194760665|ref|XP_001962559.1| GF14380 [Drosophila ananassae] gi|190616256|gb|EDV31780.1| GF14380 [Drosophila ananassae] Length = 8366 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 14/182 (7%), Positives = 43/182 (23%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS------RYRLDRL 331 + + + ++ + L + LS + L Sbjct: 7118 WRQYLQHVQSFLSCAIPEDYGSLREQQQLCAIHQNLLISQQSVLSEMPLESEVSEQYKAL 7177 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 7178 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREVERNALQLRYIHLKRVP 7237 Query: 392 FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + + L +Q+K + + + + S + L Sbjct: 7238 HLKNRLDAMLQQLDQGEQQSKALQEQQQELSRHCDDALATAMRMEQASIGQRIGNLRAAL 7297 Query: 450 QS 451 ++ Sbjct: 7298 KT 7299 >gi|148239736|ref|YP_001225123.1| putative ATPase involved in DNA repair [Synechococcus sp. WH 7803] gi|147848275|emb|CAK23826.1| Putative ATPase involved in DNA repair [Synechococcus sp. WH 7803] Length = 894 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 19/178 (10%), Positives = 54/178 (30%), Gaps = 18/178 (10%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 E ++ + + L+ + Q L + L L L+ R Sbjct: 204 QQSELWKRRQELQQAEQRHRDACQQLEMYEAACQELDRNEQALRDLETVQAPALQQQRRR 263 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 F + + +S + ++ R+ L+ ++ + R I +++ + Sbjct: 264 ----FTTLRDLQRSLAPLIQEEQQRKQQLKTLMSLDAETESTDRSIQAHRRDLEKAGDQV 319 Query: 406 REQTKNR---------IFYLHTHIKKLITRIEFI-----LSHKIKSCHTSVSITTRIL 449 +Q++ + +++ + L +I+ + R+L Sbjct: 320 AQQSEQLKARQASLNALEEQRQALEERGHSLRRQQEIRTLETRIRDYQQRADLRARLL 377 >gi|118086424|ref|XP_001231411.1| PREDICTED: similar to desmoplakin isoform II isoform 1 [Gallus gallus] Length = 2263 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 15/162 (9%), Positives = 50/162 (30%), Gaps = 10/162 (6%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL--EIIIFRK 346 + + L++ + L + + S+ + + + +E E L + + Sbjct: 1172 KEYEIERLRVLLQDEGTRKREYENELAKASNRIQESKNQYNHIMQERETLLIKMSALEQD 1231 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE--KIAILHM 404 + + ++ N + +Q +E +Q L + K + + Sbjct: 1232 KARLQRLEEELN------RLKVNLESESRLKQRLENEKQQILNDLNQWKSQHSRTEESIR 1285 Query: 405 LREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + + + ++ I R++ + + + T Sbjct: 1286 KIQCEREKSEREKNTLRSEIERLQMEIKRIEERYRCRLEETA 1327 >gi|168269646|dbj|BAG09950.1| centrosomal protein 164 kDa [synthetic construct] Length = 1455 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 786 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 841 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 842 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 901 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 902 LETVRQEQHKRLEDLRRRHREQERKLQDL 930 >gi|119587725|gb|EAW67321.1| centrosomal protein 164kDa, isoform CRA_d [Homo sapiens] Length = 1455 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 786 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 841 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 842 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 901 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 902 LETVRQEQHKRLEDLRRRHREQERKLQDL 930 >gi|110804178|ref|YP_687698.1| hypothetical protein SFV_0108 [Shigella flexneri 5 str. 8401] gi|110613726|gb|ABF02393.1| putative membrane protein [Shigella flexneri 5 str. 8401] Length = 615 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 19/188 (10%), Positives = 51/188 (27%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P Sbjct: 428 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 487 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372 Q +R R+ EL + + + + RI+S +K +Q Sbjct: 488 QRREAARQRIQSASPELRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 547 Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 L +QQ ++I + +++ + + + + + R+ Sbjct: 548 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 607 Query: 430 ILSHKIKS 437 + +++ Sbjct: 608 RGARRLER 615 >gi|328724108|ref|XP_001942761.2| PREDICTED: hypothetical protein LOC100162845 [Acyrthosiphon pisum] Length = 1020 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 66/189 (34%), Gaps = 4/189 (2%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 P +L ++ L + + + + D+++ DR Sbjct: 568 PEITINDVKKPDLCTLKRSLSKDLNQESKRSKIVIERDDRKKDRSIKSKSNERDREKLRE 627 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLE 394 + R+ R I+N K +++ Q +++ ++ +++ + I + Sbjct: 628 LERERERLEREKRRQQEILNLTKMKTERERLKQKEQERAIREEERKRRIEKERQLEIERK 687 Query: 395 KKEKIAILHMLREQTK---NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 +KE+ L R++ + RI + + +L + + +++ + L+ Sbjct: 688 QKEEAIRLEKERQKLRIERERIEKEKSELLRLERENQRLERERLQREKEELRRAQEKLEE 747 Query: 452 FAYKNTLKR 460 + LKR Sbjct: 748 TKRQAILKR 756 >gi|327485332|gb|AEA79738.1| Pseudouridylate synthase, 23S RNA-specific [Vibrio cholerae LMA3894-4] Length = 559 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L ++Q KQQ + Q + + Sbjct: 127 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 185 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 186 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 245 Query: 448 IL 449 L Sbjct: 246 KL 247 >gi|297470790|ref|XP_002684752.1| PREDICTED: filamin A interacting protein 1-like isoform 1 [Bos taurus] gi|296491542|gb|DAA33585.1| filamin A interacting protein 1-like isoform 1 [Bos taurus] Length = 1130 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 63/199 (31%), Gaps = 7/199 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINL---EARLNNIIIRLIKYKINTLNSLLKALPNS 317 D+ ++ KE + L L E I+ L + K + K+ Sbjct: 131 DIYEKPMNELDKVVEQHKESHRRILEQLLMAEKSHRQTILELEEEKRKHKEYMEKSDEFI 190 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 L RL RL + + E K + + + + + Q L Q Sbjct: 191 S-LLEQECERLKRLIDQETESREKKEQEKEKRVTALKEELTKLKSFALMVVDEQQRLTAQ 249 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHK 434 +++ Q L E K+A+ ++ + + L ++ T+ + K Sbjct: 250 LALQRQKIQDLTTSAKETHAKLALAEARAQEEEQKATRLENELQTQTTKFHQNQETIMAK 309 Query: 435 IKSCHTSVSITTRILQSFA 453 + + + + L + + Sbjct: 310 LTNEDSQNRQLRQKLAALS 328 >gi|254852197|ref|ZP_05241545.1| DNA polymerase III [Listeria monocytogenes FSL R2-503] gi|258605503|gb|EEW18111.1| DNA polymerase III [Listeria monocytogenes FSL R2-503] Length = 1108 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|147765511|emb|CAN78110.1| hypothetical protein VITISV_004428 [Vitis vinifera] Length = 1207 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 22/197 (11%), Positives = 57/197 (28%), Gaps = 14/197 (7%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 V + AR + + +K + + + RL + Sbjct: 396 VKERREWAHQRAMQAARKLSHDLTELKMLRMEMEETQQLKKGKQTLEDTTMKRLSDMENA 455 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L K + + L I + ++ I++ QQ + ++ + Sbjct: 456 LRKASGSSGSEKKCLKRLLAWEKQKTKLQEEIGEEKRKIVDLQQQMVRVEQAQKEAEVKW 515 Query: 395 KKEKIAILHMLRE-------------QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 +++ A + K ++ L I+ R + L ++ + Sbjct: 516 RQDLKAKELAFVQVEEERRAKEAAEANNKRKLEALRLKIEIDFQRHKDDLQR-LEQELSR 574 Query: 442 VSITTRILQSFAYKNTL 458 + ++ + + NTL Sbjct: 575 LKVSAQSTELVHPLNTL 591 >gi|40789033|dbj|BAA83004.2| KIAA1052 protein [Homo sapiens] Length = 1456 Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 787 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 842 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 843 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 902 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 903 LETVRQEQHKRLEDLRRRHREQERKLQDL 931 >gi|27529702|dbj|BAA13206.2| KIAA0216 [Homo sapiens] Length = 2067 Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1684 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1743 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1744 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1803 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1804 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1863 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1864 NMEKLTEERDQRIAA 1878 >gi|308068158|ref|YP_003869763.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681] gi|305857437|gb|ADM69225.1| ATPase involved in DNA repair [Paenibacillus polymyxa E681] Length = 674 Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 17/205 (8%), Positives = 58/205 (28%), Gaps = 11/205 (5%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 A A + ++ + + + + L + + Sbjct: 270 HQEAQKRADEAALEQEIRVEELQEQLEQVQAGSTELSSRLGEAQEQARVLKQQQSELESV 329 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L R + E + R + + + Q+ Q +LE+ Sbjct: 330 LETQRQVAIEREQADTLAREELQSRYDQLEAEAKAAQQQTAKLEEEQRRMQKLLEQAHVS 389 Query: 381 EQIVK----------QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + ++ + R + E++ + L + + + + + ++ ++ +E Sbjct: 390 SRKLQSELATLAESEKSWRKLAEERQLAVDELELSLLEAREQKEAIQEQLQHAVSELE-A 448 Query: 431 LSHKIKSCHTSVSITTRILQSFAYK 455 + K S + ++ + + Sbjct: 449 IKDKFASQQQRLVQLEARIKELSPE 473 >gi|260855273|ref|YP_003229164.1| putative tail length tape measure protein [Escherichia coli O26:H11 str. 11368] gi|257753922|dbj|BAI25424.1| putative tail length tape measure protein [Escherichia coli O26:H11 str. 11368] gi|323156734|gb|EFZ42872.1| phage tail tape measure protein, lambda family [Escherichia coli EPECa14] Length = 1021 Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|123229684|emb|CAM22596.1| 5-azacytidine induced 1 [Mus musculus] Length = 1060 Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 87/268 (32%), Gaps = 12/268 (4%) Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I + ++ + R P + ++L G GS ++ + + + A+ Sbjct: 512 QSIMTFLDEMEKSGQERPAPWRESLVLEAGSGSEGSTSVMRLKLELEEKKQAMALLQRAL 571 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 + D T+ R + ++ + I + +I K Sbjct: 572 AQQRDLTV------RRVKETEKELTRQLRQQKEQYEATIQRHLSFIDQLIEDKKVLSEKC 625 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF-----RKYRHFNHIINRIKSDFL 362 +++ L + DQ ++ L+ ++ R+ + N +IK + Sbjct: 626 EAVVAELKHGDQRCRERVAQMQEQHELEIKKLKELMSATEKIRREKWINEKTKKIKEITV 685 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI-K 421 + ++ I + +Q + ++ H + +++ E+ + + + + Sbjct: 686 RGLEPEIQKLIAKHKQEVRRLRGLHEAELQQREEQAAQRHLRQAEELRQHLDREREVLGQ 745 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRIL 449 + R + ++ ++ R L Sbjct: 746 QERERAQQRFEQHLEQEQRALEQQRRRL 773 >gi|119587724|gb|EAW67320.1| centrosomal protein 164kDa, isoform CRA_c [Homo sapiens] Length = 1460 Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 783 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 838 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 839 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 898 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 899 LETVRQEQHKRLEDLRRRHREQERKLQDL 927 >gi|115648142|ref|NP_055771.4| centrosomal protein of 164 kDa [Homo sapiens] gi|162416241|sp|Q9UPV0|CE164_HUMAN RecName: Full=Centrosomal protein of 164 kDa; Short=Cep164 gi|157169996|gb|AAI52749.1| Centrosomal protein 164kDa [synthetic construct] gi|162318052|gb|AAI56877.1| Centrosomal protein 164kDa [synthetic construct] Length = 1460 Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 783 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 838 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 839 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 898 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 899 LETVRQEQHKRLEDLRRRHREQERKLQDL 927 >gi|308494581|ref|XP_003109479.1| CRE-SYD-2 protein [Caenorhabditis remanei] gi|308245669|gb|EFO89621.1| CRE-SYD-2 protein [Caenorhabditis remanei] Length = 1180 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 27/242 (11%), Positives = 72/242 (29%), Gaps = 10/242 (4%) Query: 216 RGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAV 275 R GSI + A+ + +++ + T + + + T A Sbjct: 264 RTNGSISSESANRLIEMQEALERMKTELANSLKQSNEVTTRNAELEDQLTEDTREKHAAQ 323 Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKIN--TLNSLLKALPNSDQTLSCSRYRLDRLPR 333 L++ + L+A+ + R+ + T + + + L D R Sbjct: 324 ESIVRLKNQICELDAQRTDQETRITTLESRFLTAQRESTCIRDLNDKLEHQLANKDAAVR 383 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 E + + R + +K + E QQ +E + + + Sbjct: 384 LNEEKVHSLQERLELAEKQLAQSLK------KAESLPSVEAELQQRMEALTAAEQKSVSA 437 Query: 394 EKK-EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQS 451 E++ +++ + R ++ R+ + + + + +Q+ Sbjct: 438 EERIQRLDRNIQELQAELERAVQRERMNEEHSQRLSSTVDKLLSESNDRLQLHLKERMQA 497 Query: 452 FA 453 Sbjct: 498 LD 499 >gi|229587954|ref|YP_002870073.1| putative TetR family regulatory protein [Pseudomonas fluorescens SBW25] gi|229359820|emb|CAY46670.1| putative TetR-family regulatory protein [Pseudomonas fluorescens SBW25] Length = 207 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 7/116 (6%) Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 F N + + H+ H R++F + L L + Sbjct: 54 FERFQNELAPLLDPPADAQLEAEDYWLFLHLIVERMAHYRFLFQDLSNLAGRLPKLAKGI 113 Query: 410 KNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI-----LQSFAYKNTLKR 460 +N + L + L+ R++ ++ S ++ L S Y+ L R Sbjct: 114 RNLLTALKRTLASLLARLKAA--GQLVSGTQALGQLVEQITLTLLFSLDYQRILDR 167 >gi|25089760|sp|Q62036|AZI1_MOUSE RecName: Full=5-azacytidine-induced protein 1; AltName: Full=Pre-acrosome localization protein 1 gi|1199931|dbj|BAA07868.1| pre-acrosome localization protein [Mus musculus] gi|1912072|dbj|BAA19002.1| AZ-1 [Mus musculus] gi|148702778|gb|EDL34725.1| 5-azacytidine induced gene 1 [Mus musculus] Length = 1060 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 87/268 (32%), Gaps = 12/268 (4%) Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I + ++ + R P + ++L G GS ++ + + + A+ Sbjct: 512 QSIMTFLDEMEKSGQERPAPWRESLVLEAGSGSEGSTSVMRLKLELEEKKQAMALLQRAL 571 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 + D T+ R + ++ + I + +I K Sbjct: 572 AQQRDLTV------RRVKETEKELTRQLRQQKEQYEATIQRHLSFIDQLIEDKKVLSEKC 625 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF-----RKYRHFNHIINRIKSDFL 362 +++ L + DQ ++ L+ ++ R+ + N +IK + Sbjct: 626 EAVVAELKHGDQRCRERVAQMQEQHELEIKKLKELMSATEKIRREKWINEKTKKIKEITV 685 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI-K 421 + ++ I + +Q + ++ H + +++ E+ + + + + Sbjct: 686 RGLEPEIQKLIAKHKQEVRRLRGLHEAELQQREEQAAQRHLRQAEELRQHLDREREVLGQ 745 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRIL 449 + R + ++ ++ R L Sbjct: 746 QERERAQQRFEQHLEQEQRALEQQRRRL 773 >gi|332872363|ref|XP_003319184.1| PREDICTED: pericentrin [Pan troglodytes] Length = 3271 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 18/185 (9%), Positives = 48/185 (25%), Gaps = 1/185 (0%) Query: 267 PTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY 326 + + + L+ + ++ S + + N + Sbjct: 673 TELMKQEFQRKEMDWKVLKEELQREAEEKLTSMLLELREKAESEKQTIINKFELREAEMR 732 Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 +L +LE + + + + SD +H Q R+ Q + Sbjct: 733 QLQDQQAAQILDLERSLTEQQGRLQQLEQDLTSDDALHCSQCGREP-PTAQDGELAALHV 791 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + L +E T+ +++ + L + + T Sbjct: 792 KEDCALQLMLARSRFLEERKEITEKFSAEQDAFLQEAQEQHARELRLLQERHQQQLLSVT 851 Query: 447 RILQS 451 L++ Sbjct: 852 AELEA 856 >gi|326913186|ref|XP_003202921.1| PREDICTED: amyloid beta A4 protein-like, partial [Meleagris gallopavo] Length = 530 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 23/212 (10%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S +P +A + T D E Sbjct: 101 GGCGGNRNNFDSEEYCMAVCGSVLPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 160 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 161 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 218 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 219 ARVEAMLNDRRRIALENYITALQTVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 278 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 279 DPKKAAQIRSQVMTHLRVIYERMNQSLSFLYN 310 >gi|297700411|ref|XP_002827239.1| PREDICTED: LOW QUALITY PROTEIN: myosin-XVIIIa-like [Pongo abelii] Length = 2039 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1851 NMEKLTEERDQRIAA 1865 >gi|294101613|ref|YP_003553471.1| SMC domain protein [Aminobacterium colombiense DSM 12261] gi|293616593|gb|ADE56747.1| SMC domain protein [Aminobacterium colombiense DSM 12261] Length = 1139 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 22/230 (9%), Positives = 56/230 (24%), Gaps = 19/230 (8%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK--- 312 D A + + + + +Y+ ++ K Sbjct: 117 LDDVKRQWHMEGEQFAFIGQGEVAEAIHHRPQQRRSILEALFGIDQYRKKREDANQKLKF 176 Query: 313 ---ALPNSDQTLSCSRYRLDRLPRELEHNLE-IIIFRKYRHFNHIINRIKSDFLIHNIQK 368 L + +S R D + + + + + + FL + Sbjct: 177 ASEELARLETLVSELTSRRDEIAAMVTIAEKARRLLDELDEKRRGYYFSRRAFLERELYS 236 Query: 369 NRQHILEKQQHIEQIVKQH--LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + I ++ + + + + ++ + R L + L + Sbjct: 237 FQSRIHALERRKNRAAEWETIWKEGLSFYQSLFNSYEQQKKVHEERTESLGFQRETLRRQ 296 Query: 427 I-------EFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG--YTSIQD 467 + I +L + TL RG Y+ Q+ Sbjct: 297 CFATALTVKSARERLIAQKEEK-RHVEEVLSKVDEEATLARGTSYSLTQN 345 >gi|223930175|gb|ACN24739.1| hypothetical protein lmo1574 [Listeria monocytogenes] Length = 458 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 372 ELQLIINKAE 381 >gi|223930145|gb|ACN24719.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930148|gb|ACN24721.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930172|gb|ACN24737.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930220|gb|ACN24769.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930256|gb|ACN24793.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930259|gb|ACN24795.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930298|gb|ACN24821.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930328|gb|ACN24841.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930331|gb|ACN24843.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930334|gb|ACN24845.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930364|gb|ACN24865.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930397|gb|ACN24887.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930427|gb|ACN24907.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930430|gb|ACN24909.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930433|gb|ACN24911.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930436|gb|ACN24913.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930439|gb|ACN24915.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930442|gb|ACN24917.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930445|gb|ACN24919.1| hypothetical protein lmo1574 [Listeria monocytogenes] Length = 458 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 372 ELQLIINKAE 381 >gi|254824367|ref|ZP_05229368.1| DNA polymerase III [Listeria monocytogenes FSL J1-194] gi|293593601|gb|EFG01362.1| DNA polymerase III [Listeria monocytogenes FSL J1-194] Length = 1108 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|254992099|ref|ZP_05274289.1| DNA polymerase III (alpha subunit) DnaE [Listeria monocytogenes FSL J2-064] Length = 1108 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|300766000|ref|ZP_07075971.1| DNA polymerase III, alpha subunit [Listeria monocytogenes FSL N1-017] gi|300513318|gb|EFK40394.1| DNA polymerase III, alpha subunit [Listeria monocytogenes FSL N1-017] Length = 1108 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|254931514|ref|ZP_05264873.1| DNA polymerase III [Listeria monocytogenes HPB2262] gi|293583067|gb|EFF95099.1| DNA polymerase III [Listeria monocytogenes HPB2262] gi|328474924|gb|EGF45724.1| DNA polymerase III, alpha subunit [Listeria monocytogenes 220] gi|332312016|gb|EGJ25111.1| DNA polymerase III subunit alpha [Listeria monocytogenes str. Scott A] Length = 1108 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|126297932|ref|XP_001371107.1| PREDICTED: similar to hamartin [Monodelphis domestica] Length = 1151 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 14/173 (8%), Positives = 59/173 (34%), Gaps = 2/173 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + Q+ L+ + ++ +L + + N Q L + +L Sbjct: 740 SLQKEQARYNQLQEERDTVVTQLHSQIRQLQHDREEFY-NQSQELQTKLEDCRNMIADLR 798 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 L+ + + + ++Q+ + + + + ++ + +L + + Sbjct: 799 LELKKANNKVCHRELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQNKHA 858 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 859 DTTQEVEMMKTSYRKELEKNRSHLLQQNQRLDTSQKRIVE-LESHLAKKDHLL 910 >gi|294345409|ref|NP_033864.3| 5-azacytidine-induced protein 1 [Mus musculus] gi|123229683|emb|CAM22595.1| 5-azacytidine induced 1 [Mus musculus] gi|187954399|gb|AAI41109.1| 5-azacytidine induced gene 1 [Mus musculus] Length = 1059 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 87/268 (32%), Gaps = 12/268 (4%) Query: 188 KEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAI 247 + I + ++ + R P + ++L G GS ++ + + + A+ Sbjct: 511 QSIMTFLDEMEKSGQERPAPWRESLVLEAGSGSEGSTSVMRLKLELEEKKQAMALLQRAL 570 Query: 248 GHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL 307 + D T+ R + ++ + I + +I K Sbjct: 571 AQQRDLTV------RRVKETEKELTRQLRQQKEQYEATIQRHLSFIDQLIEDKKVLSEKC 624 Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF-----RKYRHFNHIINRIKSDFL 362 +++ L + DQ ++ L+ ++ R+ + N +IK + Sbjct: 625 EAVVAELKHGDQRCRERVAQMQEQHELEIKKLKELMSATEKIRREKWINEKTKKIKEITV 684 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI-K 421 + ++ I + +Q + ++ H + +++ E+ + + + + Sbjct: 685 RGLEPEIQKLIAKHKQEVRRLRGLHEAELQQREEQAAQRHLRQAEELRQHLDREREVLGQ 744 Query: 422 KLITRIEFILSHKIKSCHTSVSITTRIL 449 + R + ++ ++ R L Sbjct: 745 QERERAQQRFEQHLEQEQRALEQQRRRL 772 >gi|119587723|gb|EAW67319.1| centrosomal protein 164kDa, isoform CRA_b [Homo sapiens] Length = 1463 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 786 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 841 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 842 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 901 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 902 LETVRQEQHKRLEDLRRRHREQERKLQDL 930 >gi|42794779|ref|NP_976063.1| myosin-XVIIIa isoform b [Homo sapiens] gi|119571562|gb|EAW51177.1| hCG27198, isoform CRA_c [Homo sapiens] gi|119571564|gb|EAW51179.1| hCG27198, isoform CRA_c [Homo sapiens] Length = 2039 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1851 NMEKLTEERDQRIAA 1865 >gi|46907805|ref|YP_014194.1| DNA polymerase III, alpha subunit [Listeria monocytogenes serotype 4b str. F2365] gi|46881074|gb|AAT04371.1| DNA polymerase III, alpha subunit [Listeria monocytogenes serotype 4b str. F2365] Length = 1108 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|28416946|ref|NP_510880.2| myosin-XVIIIa isoform a [Homo sapiens] gi|33301318|sp|Q92614|MY18A_HUMAN RecName: Full=Myosin-XVIIIa; AltName: Full=Molecule associated with JAK3 N-terminus; Short=MAJN; AltName: Full=Myosin containing a PDZ domain gi|119571568|gb|EAW51183.1| hCG27198, isoform CRA_h [Homo sapiens] gi|168274483|dbj|BAG09661.1| myosin-XVIIIa [synthetic construct] Length = 2054 Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1671 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1790 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1791 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1851 NMEKLTEERDQRIAA 1865 >gi|301025093|ref|ZP_07188687.1| phage tail tape measure protein, lambda family [Escherichia coli MS 69-1] gi|300396202|gb|EFJ79740.1| phage tail tape measure protein, lambda family [Escherichia coli MS 69-1] Length = 1021 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|281203000|gb|EFA77201.1| hypothetical protein PPL_12409 [Polysphondylium pallidum PN500] Length = 307 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 13/116 (11%), Positives = 40/116 (34%), Gaps = 5/116 (4%) Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 +I I + + + + + K++Q ++ ++ + + + K I Sbjct: 83 QINILQLNNLYEELNTSLSNPHPKR---KSKQELINAKRKHRHTITELQQQQLNNKDHTI 139 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILS--HKIKSCHTSVSITTRILQSFA 453 L + + L + +IE + + H + ++I + ++S Sbjct: 140 TELQQQLNNKDHAMAELKQQLNNKDQQIESLNNKVHTVTEQQQQLNIKDQQIESLN 195 >gi|223930109|gb|ACN24695.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930130|gb|ACN24709.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930166|gb|ACN24733.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930199|gb|ACN24755.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930205|gb|ACN24759.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930262|gb|ACN24797.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930322|gb|ACN24837.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930343|gb|ACN24851.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930373|gb|ACN24871.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930379|gb|ACN24875.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930409|gb|ACN24895.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930412|gb|ACN24897.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930418|gb|ACN24901.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930421|gb|ACN24903.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930424|gb|ACN24905.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930448|gb|ACN24921.1| hypothetical protein lmo1574 [Listeria monocytogenes] gi|223930466|gb|ACN24933.1| hypothetical protein lmo1574 [Listeria monocytogenes] Length = 458 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 314 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADT--RNG 371 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 372 ELQLIINKAE 381 >gi|255522861|ref|NP_001157333.1| glial fibrillary acidic protein [Equus caballus] Length = 427 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 23/218 (10%), Positives = 63/218 (28%), Gaps = 19/218 (8%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + E L + + A + ++ + + L + E + Sbjct: 146 LRQKLQDETNLRLEAENNLAAYRQEADEATLARVDLERKIESLEEEIRFLRKIHEEEVRE 205 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + + + H+ + L +++ R ++ R F + + A Sbjct: 206 LQEQLAQQQVHVELDVAKPDLTAALREIRTQYEAMASSNMHEAEEWYRSKFADLTDAAAR 265 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEF------ILSHKIKSCHTSVSITTRILQSFAYK 455 L Q K+ ++ L +E L +++ + ++ +Y+ Sbjct: 266 NAELLRQAKHEANDYRRQLQALTCDLESLRGTNESLERQMREQEERHAR-----EAASYQ 320 Query: 456 NTLKRGYTSIQDTNNNFITQ--KRNLAT-KTRILINFF 490 TL R + + R+L + + + Sbjct: 321 ETLAR-----LEEEGQTLKDEMARHLQEYQDLLNVKLA 353 >gi|119571569|gb|EAW51184.1| hCG27198, isoform CRA_i [Homo sapiens] Length = 2057 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1674 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1733 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1734 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1793 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1794 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1853 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1854 NMEKLTEERDQRIAA 1868 >gi|54633200|dbj|BAD66836.1| KIAA0216 splice variant 1 [Homo sapiens] Length = 2046 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1663 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1722 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1723 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1782 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1783 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1842 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1843 NMEKLTEERDQRIAA 1857 >gi|54633204|dbj|BAD66838.1| KIAA0216 splice variant 2 [Homo sapiens] Length = 1715 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1347 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1406 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1407 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1466 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1467 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1526 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1527 NMEKLTEERDQRIAA 1541 >gi|47094219|ref|ZP_00231932.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 4b H7858] gi|226224175|ref|YP_002758282.1| DNA polymerase III (alpha subunit) DnaE [Listeria monocytogenes Clip81459] gi|47017408|gb|EAL08228.1| DNA polymerase III, alpha subunit [Listeria monocytogenes str. 4b H7858] gi|225876637|emb|CAS05346.1| Putative DNA polymerase III (alpha subunit) DnaE [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328465072|gb|EGF36346.1| DNA polymerase III, alpha subunit [Listeria monocytogenes 1816] Length = 1108 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 964 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 1021 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 1022 ELQLIINKAE 1031 >gi|332098996|gb|EGJ03943.1| phage tail tape measure protein, lambda family [Shigella dysenteriae 155-74] Length = 1021 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|325127621|gb|EGC50537.1| chromosome segregation protein SMC [Neisseria meningitidis N1568] Length = 1161 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 14/151 (9%), Positives = 41/151 (27%), Gaps = 1/151 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ R+ RI Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQNLHQRIERYKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448 + + RI +++ + + Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQTEEKQ 353 >gi|291567264|dbj|BAI89536.1| DNA polymerase III alpha subunit [Arthrospira platensis NIES-39] Length = 1219 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 35 VCVRGEISGYRGI-HSSG--HAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGK 91 V V + + G A+ L+D +IDA+++ + ++ +E ++ GK Sbjct: 1033 VKVAATLINIKPHLTKKGDRMAFLLLEDLTGQIDAVVFPSSYEAVQQELKENAVVVIEGK 1092 Query: 92 ITTFPGSSKYQIIIESLIPSGS 113 + + QII+E++ + Sbjct: 1093 VE--KRDDQTQIIVEAIKSADE 1112 >gi|289167846|ref|YP_003446115.1| DNA-polymerase III alpha-chain [Streptococcus mitis B6] gi|288907413|emb|CBJ22250.1| DNA-polymerase III alpha-chain [Streptococcus mitis B6] Length = 1042 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Query: 24 LKHIVESNLSHVCVRGE-ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEE 82 + ++ E++ + + + + I R A+ + D+ ++D ++ ++ E Sbjct: 887 ISNLSENSYAIILIEVQKIKVIRTKKGENMAFLQVDDSKKKLDVTLFSDLYRRVGQEVRE 946 Query: 83 GIEFLVIGKITTFPGSSKYQIIIESLIPS 111 G + + GK+ + Q+I + + + Sbjct: 947 GDFYYIKGKVQ--SRDGRLQMIAQEIREA 973 >gi|191173153|ref|ZP_03034685.1| gifsy-1 prophage VmtH [Escherichia coli F11] gi|300992769|ref|ZP_07180046.1| phage tail tape measure protein, lambda family [Escherichia coli MS 200-1] gi|190906538|gb|EDV66145.1| gifsy-1 prophage VmtH [Escherichia coli F11] gi|300305265|gb|EFJ59785.1| phage tail tape measure protein, lambda family [Escherichia coli MS 200-1] gi|324010853|gb|EGB80072.1| phage tail tape measure protein, lambda family [Escherichia coli MS 60-1] Length = 1021 Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWMASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHLREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|320172945|gb|EFW48174.1| Phage tail length tape-measure protein 1 [Shigella dysenteriae CDC 74-1112] Length = 1021 Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|292491800|ref|YP_003527239.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus halophilus Nc4] gi|291580395|gb|ADE14852.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus halophilus Nc4] Length = 823 Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 19/196 (9%), Positives = 59/196 (30%), Gaps = 5/196 (2%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 A + + + R + L + +L + +S+ ++ R + Sbjct: 234 ARHKLEQTQTELQRRQSGVNRSQQELNTLQEQLAQKKAALADSGRSSEILRLEAQLREQK 293 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNI---QKNRQHILEKQQHIEQIVKQH 387 + L + + + +K ++ + E E I Sbjct: 294 AKLYRKQQLIVRLEETAVQQRQTLKHLKQGAARFATDTTEEIKTLKAELGHRNEDITALR 353 Query: 388 LRYIFLEKKEKIAILHMLREQTKN--RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 + +++ + A + ++ K+ ++ + RI S ++ + Sbjct: 354 QQLTATQEQLQKARTDLEQQDKKSSAKLAQFKQQQLLELERINQKQSESLEQQKARIKEL 413 Query: 446 TRILQSFAYKNTLKRG 461 +L + + + L +G Sbjct: 414 ETLLATESREKALAQG 429 >gi|112959018|gb|ABI26998.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959045|gb|ABI27016.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959108|gb|ABI27058.1| DNA polymerase III alpha subunit [Listeria monocytogenes] Length = 441 Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 297 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 354 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 355 ELQLIINKAE 364 >gi|78187531|ref|YP_375574.1| chromosome segregation protein SMC [Chlorobium luteolum DSM 273] gi|78167433|gb|ABB24531.1| Chromosome segregation protein SMC [Chlorobium luteolum DSM 273] Length = 1177 Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats. Identities = 18/213 (8%), Positives = 57/213 (26%), Gaps = 20/213 (9%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 E L AA MA ++ + L+ +L + Sbjct: 238 QEKVDPLEGRIRQEEMQNHELAARMACEDSAIQEAEVRQLQEE-----EKLSDSQKRLNA 292 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELE-HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + L + L R+ + + +++ Sbjct: 293 CNEAVHELEKRILQQTEQEKKLTADIQRVTTLAAEKARQIEREDALSGELEARRPG---- 348 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIKK 422 + E ++ + ++H + ++++ ++ +++ NR+ ++ Sbjct: 349 -TEEKCSELEERYNALAREHDQLNATLREQRNSLARERSASAEQQKEANRLAMQRQSLEA 407 Query: 423 LITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 ++ L+ T L++ + Sbjct: 408 RKEHLQSTLARLAARKRT----AEEKLEAASPL 436 >gi|317504611|ref|ZP_07962580.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315664282|gb|EFV03980.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 169 Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 43/142 (30%), Gaps = 9/142 (6%) Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + ++ R E+ + +E + +++ ++ R+ Sbjct: 32 EALKAMPGYAVSERDMAALRAKYEEEGKRVEDDFNKKYEQFLDGQRDFAPLILQKRQAEL 91 Query: 411 NRIFYLHTHIKKLITRIEFILSHKIKSC-HTSVSITTRILQSFAYKNTLKRGYTSIQDTN 469 + + K R+ + K+ + + + +RGY I +T+ Sbjct: 92 QEMMEKNVAFKNESKRLLDQADAESKAALKVRLRAIVARIGA-------ERGYAFILNTD 144 Query: 470 NNFITQKRNLATKTRILINFFD 491 N+ + N+ I D Sbjct: 145 NDAVPYVNNI-VGEDINALVKD 165 >gi|301611171|ref|XP_002935124.1| PREDICTED: LOW QUALITY PROTEIN: centrosomal protein of 63 kDa-A-like [Xenopus (Silurana) tropicalis] Length = 623 Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 53/171 (30%), Gaps = 19/171 (11%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS----- 359 + + + L ++D + E +KS Sbjct: 9 QQQERMGSLQGSCEAELQELMRQIDIMLDHKRSQWEAETETLKTRLELKEQELKSSLDRE 68 Query: 360 DFLIHNIQKNRQHILEKQ--------QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKN 411 D L +++ RQ +++++ Q+ Q+ L+K + LR + KN Sbjct: 69 DHLNQEVRRLRQQLIQQEEETQNKTVQYEAQLSGFKEELNRLKKSYEKVQKKHLRSEMKN 128 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTS------VSITTRILQSFAYKN 456 ++ + + +L R+E + ++ ++ + + Sbjct: 129 KVDEERSEVSRLTRRLEEFRQRSLDWEKQRLLYQQQLAGLEAQRKTLSEQA 179 >gi|187731189|ref|YP_001878925.1| hypothetical protein SbBS512_E0110 [Shigella boydii CDC 3083-94] gi|187428181|gb|ACD07455.1| conserved hypothetical protein [Shigella boydii CDC 3083-94] gi|320185764|gb|EFW60519.1| Putative exported protein [Shigella flexneri CDC 796-83] gi|332098856|gb|EGJ03807.1| hypothetical protein SB359474_0077 [Shigella boydii 3594-74] Length = 617 Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 50/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P Sbjct: 430 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQ 489 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370 Q +R R+ E + + + + + RI+S + R Sbjct: 490 QRREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQR 549 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEF 429 +++ + Q V+ +E++ R NR L+ + R+ Sbjct: 550 PLNQQQRDNARQRVQSASPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSE 609 Query: 430 ILSHKIKS 437 + +++ Sbjct: 610 RGARRLER 617 >gi|118094253|ref|XP_422300.2| PREDICTED: similar to translocated promoter region (to activated MET oncogene) [Gallus gallus] Length = 2368 Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 20/222 (9%), Positives = 65/222 (29%), Gaps = 4/222 (1%) Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 DE A + + + HE +L+D A +++ + Q ++ + Sbjct: 1143 DEASTLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAALNVSLNEEGKSQEQILEI 1202 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + L + +++ + Sbjct: 1203 LRFIRRE-KEIAETRFEVAQVESLRFRQRVEHLERELQEVQDSLNAEREKVQVTAKTIAQ 1261 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 H + + LI + R+ +Q ++Q+ + + + + + Sbjct: 1262 HEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADIL--PLQESNAELSE 1319 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCH-TSVSITTRIL 449 + +++ + R + H + T + ++L Sbjct: 1320 KSGMLQAEKKLLEEDVKRWKTRTQHLLSQQKDTDLEEYRKLL 1361 >gi|112959021|gb|ABI27000.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959024|gb|ABI27002.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959027|gb|ABI27004.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959030|gb|ABI27006.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959033|gb|ABI27008.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959036|gb|ABI27010.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959039|gb|ABI27012.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959042|gb|ABI27014.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959048|gb|ABI27018.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959051|gb|ABI27020.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959054|gb|ABI27022.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959057|gb|ABI27024.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959060|gb|ABI27026.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959063|gb|ABI27028.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959066|gb|ABI27030.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959069|gb|ABI27032.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959072|gb|ABI27034.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959075|gb|ABI27036.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959078|gb|ABI27038.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959081|gb|ABI27040.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959084|gb|ABI27042.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959087|gb|ABI27044.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959090|gb|ABI27046.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959093|gb|ABI27048.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959096|gb|ABI27050.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959099|gb|ABI27052.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959102|gb|ABI27054.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959105|gb|ABI27056.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959111|gb|ABI27060.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959114|gb|ABI27062.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959117|gb|ABI27064.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959120|gb|ABI27066.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959123|gb|ABI27068.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959126|gb|ABI27070.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959129|gb|ABI27072.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959132|gb|ABI27074.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959135|gb|ABI27076.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959138|gb|ABI27078.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959141|gb|ABI27080.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959144|gb|ABI27082.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959147|gb|ABI27084.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959150|gb|ABI27086.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959153|gb|ABI27088.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959156|gb|ABI27090.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959159|gb|ABI27092.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959162|gb|ABI27094.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959165|gb|ABI27096.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959168|gb|ABI27098.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959171|gb|ABI27100.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959174|gb|ABI27102.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959177|gb|ABI27104.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959180|gb|ABI27106.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959183|gb|ABI27108.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959186|gb|ABI27110.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959189|gb|ABI27112.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959192|gb|ABI27114.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959195|gb|ABI27116.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959198|gb|ABI27118.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112959201|gb|ABI27120.1| DNA polymerase III alpha subunit [Listeria monocytogenes] Length = 441 Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 297 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 354 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 355 ELQLIINKAE 364 >gi|169636459|ref|NP_001038576.1| liprin-alpha-2 [Danio rerio] gi|94732311|emb|CAH68863.2| novel protein similar to vertebrate protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 (PPFIA2) [Danio rerio] gi|94732384|emb|CAH69028.2| novel protein similar to vertebrate protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 (PPFIA2) [Danio rerio] gi|94733098|emb|CAK11291.1| novel protein similar to vertebrate protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 (PPFIA2) [Danio rerio] gi|94734001|emb|CAK10733.1| novel protein similar to vertebrate protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 (PPFIA2) [Danio rerio] Length = 1236 Score = 37.4 bits (85), Expect = 5.9, Method: Composition-based stats. Identities = 34/352 (9%), Positives = 107/352 (30%), Gaps = 24/352 (6%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQN 205 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 ++ KV + +++ + + + A +++L + Sbjct: 206 AHIQR-----KVASGDGAEDLLEGTDAQKLHSKRLSNGSMESGDEASQVVELQELLEKQN 260 Query: 230 EMIVRAIANSSIPI--ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 + + S +S + E + D + + Sbjct: 261 YELAQMKERMSSLSSRVSEVEQELETARKDLI------KSEDMNNKFQRDIKEAMCQKED 314 Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKY 347 +E R+ + R + ++ L + + + ++ R E L+ + Sbjct: 315 MEERIVTLEKRYLSA--QRESTSLHDITDKLENELANKEAFLRQMEEKNRQLQERLELAE 372 Query: 348 RHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 + + + ++ + R L K + +++ +R++ + +EK L R+ Sbjct: 373 QKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGSIEERMRHLEGQLEEKNQELLRARQ 432 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 + ++ R+ + + + + + + KN L Sbjct: 433 R--------EKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEEKNVL 476 >gi|320654217|gb|EFX22280.1| putative tail component of prophage CP-933K [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320664717|gb|EFX31860.1| putative tail component of prophage CP-933K [Escherichia coli O157:H7 str. LSU-61] Length = 1021 Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|149571569|ref|XP_001518991.1| PREDICTED: similar to protein kinase, partial [Ornithorhynchus anatinus] Length = 740 Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 67/206 (32%), Gaps = 8/206 (3%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT-LNSLLKA 313 LA ADL T AE + + + L + + + L + + + Sbjct: 471 LAKQKADLELAMKTITAENRREICDKERECLNKKQELMRDREASLWELEEHHLQEKHQLV 530 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 R+ L R + + ++ R + K+ + + + Sbjct: 531 KQQLKDQYFLQRHELLRKHEKEQEQMQRYNQRMVESLKVRQQQEKARLPKIQRSEGKTRM 590 Query: 374 LEKQQHIE------QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + ++ F +++EK +++Q K+ HI+ + + Sbjct: 591 AMYKKSLHINASGSASEQREKIKQFSQQEEKRQKAERVQQQQKHEAQMRDMHIQ-CESNL 649 Query: 428 EFILSHKIKSCHTSVSITTRILQSFA 453 + + + CH V T+ L++ Sbjct: 650 NELQQLQNEKCHLLVEHETQKLKALD 675 >gi|77459439|ref|YP_348946.1| exonuclease SbcC [Pseudomonas fluorescens Pf0-1] gi|77383442|gb|ABA74955.1| exonuclease [Pseudomonas fluorescens Pf0-1] Length = 1213 Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 14/152 (9%), Positives = 42/152 (27%), Gaps = 7/152 (4%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L + +Q+++ R L + + + H Sbjct: 699 RAAWLTRQNEQLNQSITQDEQRQTALLTLQQDAARLTQQLRQAETAHQQASQHLSNQQRE 758 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + +RQ + E+ ++ + + E + L Q R+ + ++L Sbjct: 759 LSADRQRLDEELAAFATLLPS--DTLEALRAEPASTFMQLDRQIAERLAQVDQQKEELAE 816 Query: 426 RIEFIL-----SHKIKSCHTSVSITTRILQSF 452 + + + + + + L + Sbjct: 817 QQQRQQTLEKEQDRQQGRVQQLQNAEQQLNAL 848 >gi|323965346|gb|EGB60804.1| exonuclease SbcC [Escherichia coli M863] gi|327254712|gb|EGE66328.1| exonuclease sbcC [Escherichia coli STEC_7v] Length = 1047 Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 39/153 (25%), Gaps = 12/153 (7%) Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNI 366 L D+ + R L + L + ++ + + Sbjct: 247 NWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHTAAL 306 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIK 421 RQ I E +++ + K+ + Q +R + + Sbjct: 307 AHTRQQIEEVNTRLQRTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQWNNELA 366 Query: 422 KLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + S + ++ ++ + L S Sbjct: 367 GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNSL 399 >gi|198422063|ref|XP_002122097.1| PREDICTED: similar to zinc finger protein 291 [Ciona intestinalis] Length = 1439 Score = 37.4 bits (85), Expect = 6.0, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 59/192 (30%), Gaps = 15/192 (7%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 + + + S +L R ++ K+ + Q L Sbjct: 576 QMHHEKSQKIHELSGKVQEVVSWKNDLIRRQRVLLQSSHIEKLQRAEE-----QRAMQLL 630 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 S R + E + + + ++ + + + ++ R + + + E Sbjct: 631 SKVRKAQAEDTKVNEIAFINELQEQNKRHEVLMRIGEHEERLQELEDERNKMNQVKSAKE 690 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + VK+ R + +++++ L + R++ RI +K ++ + Sbjct: 691 ENVKERRRALEKVRQDRMEELKVRRKEQDARIEQQRIDKEKEREKMAK------EKARER 744 Query: 442 VSITTRILQSFA 453 + L + Sbjct: 745 ----QQRLSALN 752 >gi|326933430|ref|XP_003212807.1| PREDICTED: dixin-like [Meleagris gallopavo] Length = 689 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 17/186 (9%), Positives = 47/186 (25%), Gaps = 14/186 (7%) Query: 288 LEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN--------- 338 LE ++ + + K + L D E Sbjct: 282 LENSWEEQLLEQQDHLEKEMEEAKKMISGLQALLLNGSLPEDEQEGSFELCEHGACPEEQ 341 Query: 339 ---LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + + + + + + + L+++ + L+ L Sbjct: 342 LIIIRSRLDQSEEENQDLKKELLKYKQEARNLQGIKDALQQRLAQQDASVLQLKQELLRA 401 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 LH + ++ + + + + ++ T + R L +Y+ Sbjct: 402 NMDREELHNQNVDLQRKVEERNRLLAEYKKELGQK-DRHLQQHQTKLDEMLRQLSEASYQ 460 Query: 456 NT-LKR 460 L+R Sbjct: 461 QVDLER 466 >gi|47211881|emb|CAF91177.1| unnamed protein product [Tetraodon nigroviridis] Length = 2193 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 26/239 (10%), Positives = 70/239 (29%), Gaps = 16/239 (6%) Query: 225 WHFNDEMIVRAIANS---SIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281 F+ E+ +R + S I G+ +T ++ R P Sbjct: 656 MSFDRELCIRQLRYSGMMETIRIRRAGYPIRYTFVEFVERYRVLMPGIKPAHIQEDLRGT 715 Query: 282 QSSLINLEARLNNIII-----------RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 ++ ++ + +I ++ + +++ R RL+ Sbjct: 716 CQQIVLARLGKHDDWQIGKTKIFLKDHHDTQLEIERDEAITDKVILIQKSIRGHRQRLNF 775 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY 390 L +R +R + + I ++R+ + Q ++ R Sbjct: 776 LRLRTSATTIQRFWRGHRCRRNYRTMKTGFLRLQAIFRSRKFFISYQATRLRVTLIQARC 835 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 ++ LR + + ++L R+ + ++ ++ R+L Sbjct: 836 RGFLVRQMFWR--HLRAVLTLQAYTRGMIARRLCHRLRAERHQRQEAERQRLAEEERLL 892 >gi|312946138|gb|ADR26965.1| putative tail length tape measure protein from putative prophage [Escherichia coli O83:H1 str. NRG 857C] Length = 1021 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQTVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|251788032|ref|YP_003002753.1| hypothetical protein Dd1591_0384 [Dickeya zeae Ech1591] gi|247536653|gb|ACT05274.1| MscS Mechanosensitive ion channel [Dickeya zeae Ech1591] Length = 1107 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 22/194 (11%), Positives = 52/194 (26%), Gaps = 17/194 (8%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + L L TL+ R R E L + ++ + Sbjct: 210 QADVYKKRRDRLDNQLQLLRSTLNTLRQREAEQALERTEQLAEQEGQLPAAVAGLLQTNR 269 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL---HMLREQTKNRIFY 415 + N Q R + +Q +R +E+ L L E + ++ Sbjct: 270 DLSMALNQQAQRMDQIAARQRQTAAQTLQVRQALSTLREQAQWLGSSPALGETLRAQVAR 329 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA-YKNTLKRGYTSIQDTNNNFIT 474 L K +++ + ++++ L + + + N +T Sbjct: 330 LPEMPKP--QQLDGDM-AQLRAQRLHYEDQLNKLPANSEP----------ARQDNGAPLT 376 Query: 475 QKRNLATKTRILIN 488 + ++ Sbjct: 377 SAQQKIVNDQLRTQ 390 >gi|260807192|ref|XP_002598393.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae] gi|229283665|gb|EEN54405.1| hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae] Length = 1869 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 9/124 (7%), Positives = 41/124 (33%), Gaps = 1/124 (0%) Query: 329 DRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL 388 + +E + + ++ R + ++ + ++ ++ E+++ + + + Sbjct: 866 QAIKKEHQRAQDELVARHKDEREELEAKMDQEMRKKEAEERKKFEAEREKALREKKNKQA 925 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS-HKIKSCHTSVSITTR 447 + K + L + + L+ + +R + L + + R Sbjct: 926 AELAARKDLTEEEMAALLAAHEQELEDLNDRLDAERSRQQLSLRDKLLARKRNRLQNKQR 985 Query: 448 ILQS 451 ++ Sbjct: 986 KQEA 989 >gi|195554943|ref|XP_002076996.1| GD24521 [Drosophila simulans] gi|194203014|gb|EDX16590.1| GD24521 [Drosophila simulans] Length = 675 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 47/153 (30%), Gaps = 8/153 (5%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 ++ ++ L + L R + + L+ + + + I + Sbjct: 481 NPNQKDISERVQCLELLGKLLQQHRQQN----IDRRQMLDKQVAKVKSDSIELDTEIATL 536 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE----KIAILHMLREQTKNRIFYL 416 QK R +E ++ + R LE + ++ L +Q ++ Sbjct: 537 DTQLRAQKQRLTKMEASYRTKRDMHAQHRQQLLEDQYDQTARLGELEKQEKQAMEKLEAN 596 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + L+T E +K+ + + L Sbjct: 597 KQRNEDLLTAAEQFQEQDLKARKDRLEKCEQKL 629 >gi|82542720|ref|YP_406667.1| hypothetical protein SBO_0106 [Shigella boydii Sb227] gi|81244131|gb|ABB64839.1| putative membrane protein [Shigella boydii Sb227] Length = 607 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 50/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P Sbjct: 420 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQ 479 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370 Q +R R+ E + + + + + RI+S + R Sbjct: 480 QRREAARERIQPASPEQRQAVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQR 539 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEF 429 +++ + Q V+ +E++ R NR L+ + R+ Sbjct: 540 PLNQQQRDNARQRVQSASPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSE 599 Query: 430 ILSHKIKS 437 + +++ Sbjct: 600 RGARRLER 607 >gi|84998962|ref|XP_954202.1| hypothetical protein [Theileria annulata] gi|65305200|emb|CAI73525.1| hypothetical protein TA20215 [Theileria annulata] Length = 1207 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 19/169 (11%), Positives = 53/169 (31%), Gaps = 7/169 (4%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + RL+ ++ + + + L R +RL +E R + Sbjct: 424 QERLDIEEKIRFAQEVQKRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRK 483 Query: 349 HFNHIINRIKSDFLIHNIQKNR------QHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + ++K R + + E++ E++ ++ I + + + Sbjct: 484 LEERLEQERLAIEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQEVQ 543 Query: 403 HMLREQTKNRIFYLHTHIKKLIT-RIEFILSHKIKSCHTSVSITTRILQ 450 L + R+ ++L R+E + + + L+ Sbjct: 544 KRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRKLEERLE 592 >gi|71418478|ref|XP_810864.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70875461|gb|EAN89013.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 911 Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats. Identities = 17/170 (10%), Positives = 50/170 (29%), Gaps = 6/170 (3%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + ++ ++ K L + L N+ + +L +E Sbjct: 454 QCAQNIKALVQQIRKNAEEKLQLQQRILINTRSKNTGESQLGQKLSQENYTKEREENNTN 513 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 + F HI + D + R + +++ + K + + ++ Sbjct: 514 TKTFTHIKHFYTQDSPRTPPVQRRLDLSGNKKNSLKDYKIKGFDVLATLERQLQERDDAL 573 Query: 407 EQTKNRIFYLHTHIKKLITRIEFI------LSHKIKSCHTSVSITTRILQ 450 ++R+ L +R L +++ +++ L+ Sbjct: 574 AALRDRLEEYGREKSALESRSSESVDVVVTLERQLQERDDALAALRDRLE 623 >gi|195472753|ref|XP_002088664.1| GE11355 [Drosophila yakuba] gi|194174765|gb|EDW88376.1| GE11355 [Drosophila yakuba] Length = 3968 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 45/182 (24%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + + ++ + L + LS + L Sbjct: 2718 WRQYLQHVQSFLSCSIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2777 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRI-KSDFLIHNIQKNRQHILEKQQ-HIEQIVKQHLR 389 L I+ R + L + RQ E+ + I + + Sbjct: 2778 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERHALQLRYIHLKRVP 2837 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 ++ I L +Q+K + + + + S +S L Sbjct: 2838 HLKHRLDAMIQQLEQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 2897 Query: 450 QS 451 ++ Sbjct: 2898 KT 2899 >gi|169610525|ref|XP_001798681.1| hypothetical protein SNOG_08363 [Phaeosphaeria nodorum SN15] gi|111063519|gb|EAT84639.1| hypothetical protein SNOG_08363 [Phaeosphaeria nodorum SN15] Length = 402 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 17/188 (9%), Positives = 38/188 (20%), Gaps = 40/188 (21%) Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ--HLRYIFLEKKEKIAILHMLREQTKN 411 + + R + Q H Q ++ R + A + Sbjct: 151 QAWWCCTWPHAFLDVERGRDDDVQAHPHQHLRAPCQCRPCRPLLTQTGARGPQRQVSPGA 210 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT--RILQSFAYKNTLKRGYTSIQDTN 469 + + + + +R + +S + L RG+ + Sbjct: 211 LMPRRQSPVASIRSRARCATRAT----RRQFTTVACPARQKSLS--AALARGFAKTSNPC 264 Query: 470 NNFITQKRNLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQ---- 525 L ++P + +Q Sbjct: 265 GR----ASQLRA------------------ESKEAPDRPPPSSLRPGRSAIEPASQHSSA 302 Query: 526 ----GELF 529 G LF Sbjct: 303 PTIDGRLF 310 >gi|48256959|gb|AAT41662.1| Ccd1BalphaL [Mus musculus] Length = 474 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338 LEA ++ ++ + K + L D R + Sbjct: 61 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 120 Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 + + + + + + + QQ + Q L+ Sbjct: 121 PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 178 Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + + + ++ + + + + + + R L Sbjct: 179 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 237 Query: 450 QSFAYKNT-LKR 460 +Y+ L+R Sbjct: 238 SDASYQQVDLER 249 >gi|323172052|gb|EFZ57692.1| phage tail tape measure protein, lambda family [Escherichia coli LT-68] Length = 761 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 276 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 335 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 336 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 395 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 396 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 429 >gi|209526267|ref|ZP_03274797.1| chromosome segregation protein SMC [Arthrospira maxima CS-328] gi|209493364|gb|EDZ93689.1| chromosome segregation protein SMC [Arthrospira maxima CS-328] Length = 1199 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 59/202 (29%), Gaps = 2/202 (0%) Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 + + ++ + + L Q L ++ + LE Sbjct: 913 QVEQRLGTAKQERDRAEAQLREMQTAQSQLEWQIQKLEETQQGRREQLNIKQQQLETQKA 972 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ--QHIEQIVKQHLRYIFLEKKEKIAIL 402 I ++ L I+ + + + + + +H E +K+A L Sbjct: 973 ELPDPLPTIPEKLDLATLQREIKSLTKRMEDLEPVNMLALEEYEHTTTRLEELSQKLATL 1032 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGY 462 H R + RI T ++ ++ ++ +S LQ ++ G Sbjct: 1033 HGERTELLLRIENFTTLRRRAFQEAFDAVNQNFQTIFAELSEGDGYLQIDDPEDPFNSGL 1092 Query: 463 TSIQDTNNNFITQKRNLATKTR 484 + + + +++ + Sbjct: 1093 NLVAHPKGKPVQRLTSMSGGEK 1114 >gi|166831566|gb|ABY90102.1| CDC42 binding protein kinase gamma (predicted) [Callithrix jacchus] Length = 1551 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 17/201 (8%), Positives = 58/201 (28%), Gaps = 9/201 (4%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D+ T + P + + ++ ++ + L +Q Sbjct: 366 DVDDDTLNHPGTLPPPSHGAFSGHHLPFVGFTYTLGSHSLESSSEAWAAMERKLCCLEQE 425 Query: 321 LSCSRYRLDRLPRELEHN--LEIIIFRKYRHFNHIINRIKSDFLIHNIQK----NRQHIL 374 R P + LE + + ++ + + + Sbjct: 426 KVELSRRHQEAPHAPADHRELEQLRKEVQTLRERLSEMLRDKAPLSQMDGPPAGSPGQAS 485 Query: 375 EKQQHIEQIVKQHL--RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + QQ ++++ ++ R +++++ +E+ R+ ++ LS Sbjct: 486 DLQQELDRLHQELAEGRAGLQAQEQELCRAQGRQEELLQRLQEAQEREAATASQ-SQALS 544 Query: 433 HKIKSCHTSVSITTRILQSFA 453 +++ + + S + Sbjct: 545 SQLEEAQAAQRELEAQVSSLS 565 >gi|33152115|ref|NP_873468.1| aminopeptidase N protein [Haemophilus ducreyi 35000HP] gi|33148337|gb|AAP95857.1| aminopeptidase N protein [Haemophilus ducreyi 35000HP] Length = 869 Score = 37.4 bits (85), Expect = 6.2, Method: Composition-based stats. Identities = 20/195 (10%), Positives = 55/195 (28%), Gaps = 7/195 (3%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINT----LNSLLKA 313 Y D + A+ A+ + + L + +T + Sbjct: 664 YRCDKYQVVASDMAKRALRNVCLTYLAFTEVGNHLTYKHYQQSDNMTDTLAALSAATQAQ 723 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI--KSDFLIHNIQKNRQ 371 L DQ L+ + + ++ + R + ++ + F ++N + R Sbjct: 724 LTCRDQLLADFEQKWQQDGLVMDKWFMLQATRPDANVLQLVQSLLMHPSFNLNNPNRVRS 783 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 I Q + + + L+ Q +R+ + + + + ++ Sbjct: 784 LIGAFANQNPQAFHAVDGSGYRFLVDILLKLNQHNPQLASRLIEPLIKLSRYDNQRQTLM 843 Query: 432 SHKIKSCHTSVSITT 446 +K + Sbjct: 844 KRGLKRL-MELDNLA 857 >gi|320195890|gb|EFW70515.1| Phage tail length tape-measure protein 1 [Escherichia coli WV_060327] Length = 1021 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|312278519|gb|ADQ63176.1| DNA polymeraDNA polymerase III alphase III alpha subunit [Streptococcus thermophilus ND03] Length = 1036 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Query: 10 LDHPEYSVSELSYHLKHIVESNLSHVCVRGEISGYRGIHSSGHAYFSLKDNHSRIDAIIW 69 P +SEL+ + K V L V + R A+ S+ D +++D ++ Sbjct: 874 ASRPYQPISELTLNSKATVLVQLESVRI------IRTKKGDQMAFLSVFDGVNKLDVTLF 927 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 T + EG F + G+ + Q+I+ ++ + Sbjct: 928 PETYFYHKDKLREGSLFYLEGRTQ--ERDGRLQLILSNIEEA 967 >gi|251790688|ref|YP_003005409.1| SMC domain-containing protein [Dickeya zeae Ech1591] gi|247539309|gb|ACT07930.1| SMC domain protein [Dickeya zeae Ech1591] Length = 1227 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 49/146 (33%), Gaps = 7/146 (4%) Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH 379 R + R E +++H I ++ F + H+++++ Sbjct: 393 LARLQRQQEQTRLRLEEIENYRRQHSRHQHLGSHIPLWQAQFPQQLKWQQDLHVVQEKAA 452 Query: 380 IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT-----RIEFILSHK 434 +QI ++L EK + E+ + R+ ++L + L+ + Sbjct: 453 QQQIQAEYLDQQRTSLVEKQQAQQLACERARQRLNEHLQQDEQLEAEYPLANLRQQLARR 512 Query: 435 IKSC--HTSVSITTRILQSFAYKNTL 458 ++ + +LQ + TL Sbjct: 513 AAERPDRQQLATSAAVLQQLISQRTL 538 >gi|239817568|ref|YP_002946478.1| histidine kinase [Variovorax paradoxus S110] gi|239804145|gb|ACS21212.1| histidine kinase [Variovorax paradoxus S110] Length = 696 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 9/155 (5%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR---- 370 +++ R R+ + E E LE + R+ + + + R Sbjct: 402 RRAERDYRAERERVLAVRLEAEQALEGTVVRRTAELQQTNAALHEEIAARARLEARLRES 461 Query: 371 ----QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + + +Q+ +V R L + + + + I++ + R Sbjct: 462 LEVERQAIVQQREFVSMVSHEFRTPLTVIDGAAQSLDISKLGGEPVVKQRTERIRRAVQR 521 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 + ++ + + + L+ L RG Sbjct: 522 LTMLIENILLADRLQPENRMLRLEVVD-MAALARG 555 >gi|115709861|ref|XP_781919.2| PREDICTED: similar to Coiled coil domain-containing protein 46 [Strongylocentrotus purpuratus] gi|115973047|ref|XP_001192708.1| PREDICTED: similar to Coiled coil domain-containing protein 46 [Strongylocentrotus purpuratus] Length = 950 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 18/225 (8%), Positives = 62/225 (27%), Gaps = 18/225 (8%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 + + L ++ K + L ++ + Sbjct: 699 TKDAKVIFDLEQQLRDVKEEMLQSDSLRKQQLVELGLLREEERNKVQREHETEVRISHLG 758 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 L + + + + + ++ + + ++Q K + Sbjct: 759 EVRQLRSEMDQYRTTLHKENSTQMEQAMTQTNERLKDIERDYSNRLDQANKTIKEHQETV 818 Query: 395 KKEKI------AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + + + + + +T +++ ++K + ++ + R Sbjct: 819 HQLREENQIAKSNMELQLTETVSKLEDEKELLRKQHGAYNKAVQRELDDQRQRIKQLDRR 878 Query: 449 L--QSFAYKNTLK-------RGY--TSIQDT-NNNFITQKRNLAT 481 L + ++ L+ RG SI+D + ++ K + T Sbjct: 879 LQEEELNHQEKLQHDFEQRNRGLLPASIKDELDGTILSLKSQVNT 923 >gi|74002548|ref|XP_535715.2| PREDICTED: similar to downregulated in ovarian cancer 1 isoform 2 [Canis familiaris] Length = 1130 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 4/181 (2%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + L+ E I+ L + K + K+ L RL RL + Sbjct: 149 ESHRRILEQLLMAEKSHRQTILELEEEKRKHKEYMEKSDEFIS-LLEQECERLKRLIDQE 207 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + E K + + + + + Q L Q +++ Q L E Sbjct: 208 TKSQEKKEQEKEKRVTALKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQDLTTSAKET 267 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452 K+A+ ++ + + L ++ T+ + K+ + + + L + Sbjct: 268 HAKLALAETRVQEEEQKATRLEKELQTQTTKFHQNQETIMAKLTNEDSQNRQLRQKLAAL 327 Query: 453 A 453 + Sbjct: 328 S 328 >gi|78184004|ref|YP_376439.1| chromosome segregation protein SMC [Synechococcus sp. CC9902] gi|78168298|gb|ABB25395.1| condensin subunit Smc [Synechococcus sp. CC9902] Length = 1204 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 17/167 (10%), Positives = 53/167 (31%), Gaps = 3/167 (1%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRK 346 + + + + L + S+ + SR RL + L+ R Sbjct: 353 RRQEWQHQSKTQEKDPHQDALAAAEDTCRASESAVEVSRRRLADVAGRSGAWLDEQKRRS 412 Query: 347 YRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR 406 R + +Q+ + E+ Q + + +Q + ++++ L Sbjct: 413 ARRQELQSSVNPKLEEQQQLQERLRQESERLQELH-LEQQQDGADEQDVQQQLTTLEESW 471 Query: 407 EQTKNRIFYLHTHIKKLITRI--EFILSHKIKSCHTSVSITTRILQS 451 + + + +++ + + + +++ T + L+S Sbjct: 472 QTLIHGLSEGKQALQQTVDSLAIQQRTRSRLEQEQTRLEREIARLES 518 >gi|149199492|ref|ZP_01876527.1| Peptidase S1C, Do [Lentisphaera araneosa HTCC2155] gi|149137427|gb|EDM25845.1| Peptidase S1C, Do [Lentisphaera araneosa HTCC2155] Length = 461 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 3/65 (4%) Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTKKCQLHNNKR 519 G+ + +T + I ++ DG + A VI K P + K + Sbjct: 101 GFII--SEDGYVLTNNHVIGEADHIKVSLADGRELEAKVIGKDPKSDVAVVKVDAKDLPT 158 Query: 520 EKQGT 524 G Sbjct: 159 LALGD 163 >gi|119490443|ref|ZP_01622904.1| hypothetical protein L8106_27324 [Lyngbya sp. PCC 8106] gi|119453914|gb|EAW35069.1| hypothetical protein L8106_27324 [Lyngbya sp. PCC 8106] Length = 314 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 59/174 (33%), Gaps = 17/174 (9%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 ++ N + T+ + + ++ R RL+RL E E L+ Sbjct: 1 MTNWAKQTWERNQKAELRWEQAQTTIADQKNQIDDRQDEINLLRKRLERLTLEKEQTLKN 60 Query: 342 IIFRKYRHFNHIINRIKS--DFLIHNIQKNRQHILEKQQHI---EQIVKQHLRYIFLEKK 396 I + N + N I L + +RQ + E Q + + +++ + + Sbjct: 61 AIEQHRERVNQLENTINQLQQGLKTAEKTSRQLLEELQNQLNERQAKIEELQQQSKQLIR 120 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 EK + ++ + R+ L + + +L R+ + L+ Sbjct: 121 EKEQAEKLNQQLEQQRLPELQSELNQLKDRLTT------------LETANEKLE 162 >gi|115293378|gb|ABI93618.1| SMC protein [Terfezia boudieri] Length = 557 Score = 37.4 bits (85), Expect = 6.3, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 52/182 (28%), Gaps = 13/182 (7%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 L + + + ++ + ++ RL + + L I + Sbjct: 1 QWLKDDATVNYHNAQMAEQTAQHNFYTVNSQITQNDEKIARLQAQHQEAL-TKINQAQDE 59 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT 409 I + + ++ Q Q+ Q R ++ L L++ Sbjct: 60 LLQINQSLDVITPKAEAMTHEITHAKQAQSEVQLTWQSHRDELSSLMQEKNNLENLKKLA 119 Query: 410 KNRIFYLHTHIKKLITRIEFIL------------SHKIKSCHTSVSITTRILQSFAYKNT 457 +++ + K R + ++ +++ + V + L+ T Sbjct: 120 QSQRQRSEIGLNKWQVRYDELIAAKNLFSDTIEVQNQLSADTLKVVALRQKLEHLNDDET 179 Query: 458 LK 459 LK Sbjct: 180 LK 181 >gi|331671633|ref|ZP_08372431.1| putative membrane protein [Escherichia coli TA280] gi|331071478|gb|EGI42835.1| putative membrane protein [Escherichia coli TA280] Length = 617 Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 18/188 (9%), Positives = 49/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P Sbjct: 430 AAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 489 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372 Q +R R+ E + + + + RI+S +K +Q Sbjct: 490 QRREAARERIQSASPEQRQAVREKMQTNPQNQQRKEAARERIQSASPEQRQVFKEKVQQR 549 Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 L +QQ ++I +++ + + + + + R+ Sbjct: 550 PLNQQQRDNARQRIQSASPEQRQFFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 609 Query: 430 ILSHKIKS 437 + +++ Sbjct: 610 RGARRLER 617 >gi|301611702|ref|XP_002935361.1| PREDICTED: early endosome antigen 1 [Xenopus (Silurana) tropicalis] Length = 1402 Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 14/160 (8%), Positives = 47/160 (29%), Gaps = 6/160 (3%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + +K +++ + + + L + L R ++L + + + + + + Sbjct: 369 NQKLKAELSEVETKYQHLKAEFKQLQQQREEKEQLSLQQQSEINQLHSKLLETERQLGEA 428 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + + E+Q Q+ EK L E+ + + Sbjct: 429 HGRLKEQRQLSAEKLMDKEQQVADLQLKLSRAEEQLKEKTSASTDLQHQLEKIRQQHQEQ 488 Query: 417 HTHIKKLITRIEFILS------HKIKSCHTSVSITTRILQ 450 + +++ + +I + +L+ Sbjct: 489 TNLQQNTTSKLREAQNDLEQVLRQIGDKDQKIQNLEALLE 528 >gi|327268807|ref|XP_003219187.1| PREDICTED: pleckstrin homology-like domain family B member 2-like [Anolis carolinensis] Length = 1267 Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 21/172 (12%), Positives = 56/172 (32%), Gaps = 3/172 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 Q L A L +I + L++ + L + S + +LD P + L+ Sbjct: 662 QDHLNRKIAELERNVIGEKTKEKIKLDAEREKLEKLQELYSEQKTQLDNCPESMREQLQQ 721 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + L +N + E ++++ Q + + + + Sbjct: 722 QLNRDADLLEIESKHFE--DLEFQQLENESRLDEDKENLTQQLLREVAEYQRNIVSRKEK 779 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L++Q + + + + L ++ ++ + S + Sbjct: 780 ISALKKQANHIVQQAQREQDHFVKE-KNNLLMMLQREKENLCNLEKKYSSLS 830 >gi|255520144|ref|ZP_05387381.1| DNA polymerase III (alpha subunit) DnaE [Listeria monocytogenes FSL J1-175] Length = 329 Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 185 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 242 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 243 ELQLIINKAE 252 >gi|195018544|ref|XP_001984802.1| GH16670 [Drosophila grimshawi] gi|193898284|gb|EDV97150.1| GH16670 [Drosophila grimshawi] Length = 2884 Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 13/198 (6%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++ D + TP+ + K L L+ + + L + K L L Sbjct: 2045 FSNLTEDSKFKTPSLLMQTPELPKAITSPELKQLKEK----LSALEEEKQQQKTELELNL 2100 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 Q L+ + +LDR + L R + I+ +++ L Q+ Sbjct: 2101 NQLQQQLAHEKEQLDRQQK-----LIRGHEESERKYRQRIDLLENRILETAAQEAADRET 2155 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH- 433 +++ +V + +E A E I H ++L R++ + Sbjct: 2156 LRKE--LNLVSAAHAQCEQQHQEMAATRKQELETLNAEIKTKTEHNRELTGRLQLAMERT 2213 Query: 434 -KIKSCHTSVSITTRILQ 450 +++ + L+ Sbjct: 2214 DQLQRQVQDLERDLERLK 2231 Score = 36.7 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 11/139 (7%), Positives = 46/139 (33%), Gaps = 2/139 (1%) Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L +LD+ R E ++ I + + ++ ++Q + + Sbjct: 1715 LQRVSEKLDKHTRVEEAAIKRIRDLEMQVTQMRSGCVELQHERDSLQGRIDEQSHRISSL 1774 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 ++ +++ + + + L+ + ++ + L + ++ + +++ Sbjct: 1775 QKRLEEQRQRAEQLHRVGTSDLNTRVHELQSELRNLGEQLSARDKQMAT-MQQQLQRSKD 1833 Query: 441 SVSITTRILQSFA-YKNTL 458 + L + + L Sbjct: 1834 EIVRLETELAARSQPDRNL 1852 >gi|62363235|gb|AAX81909.1| beta-amyloid precursor protein 751 [Canis lupus familiaris] Length = 751 Score = 37.4 bits (85), Expect = 6.4, Method: Composition-based stats. Identities = 23/212 (10%), Positives = 57/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S +P +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVMPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + R + H ++++ +Q+ + +K + Sbjct: 440 ARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|195020897|ref|XP_001985289.1| GH14589 [Drosophila grimshawi] gi|193898771|gb|EDV97637.1| GH14589 [Drosophila grimshawi] Length = 1081 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 19/202 (9%), Positives = 53/202 (26%), Gaps = 14/202 (6%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 +AD L P+ + + + +++ + + + Sbjct: 380 MADGCCYLPVPSTSSNMSL-SRDVSTSNTYQVHISNTSEQGDYYVHERDRERARWANYNM 438 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLE-----IIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 Q + L R + + + + + + L + K Sbjct: 439 QQQQQQQQQQLLQPGWLNRGMHDLKDSEDDVQSMQSSSTYLRGQNAPLDAHTLAERMDKR 498 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 R K +K+ L L +K ++ + RI + R+++ Sbjct: 499 R-----KASEYHNAIKKQLHERELIRKWELERQRQEEQLEDQRIRRENL---MEQERLDY 550 Query: 430 ILSHKIKSCHTSVSITTRILQS 451 ++ + +L + Sbjct: 551 ERRQLLEREEAARKKQQALLDA 572 >gi|307175147|gb|EFN65249.1| Nesprin-2 [Camponotus floridanus] Length = 8493 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 20/187 (10%), Positives = 52/187 (27%), Gaps = 14/187 (7%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330 E + + + + + N K LP + R + Sbjct: 7266 WEEYLTHVQDFLSTGVPSDYNGLSEHRNLCEIHRKLLPEQQNLMLTVRQEEEHDRSVAEQ 7325 Query: 331 ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L L I+ R + I K + + + +++Q + + H Sbjct: 7326 FNALTSLHNETLARILERHGAVRDRISAWDKYRLDQSKLLTWLKEVEKERQRMH-LQFIH 7384 Query: 388 LRYIFLEKKEKIAILHMLRE---QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 LR + + A+L + Q ++ + + + + + ++ Sbjct: 7385 LRRLDKILQRIQALLDKVPTGETQIESLQKQQEYLLTNCEEALAVSIRMEHAANAQRIAN 7444 Query: 445 TTRILQS 451 L++ Sbjct: 7445 LRAGLET 7451 >gi|302023511|ref|ZP_07248722.1| DNA polymerase III DnaE [Streptococcus suis 05HAS68] Length = 1036 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + + D +D ++ + + + EEG + G++ + Q+++E L P Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969 Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137 LE R+ + Sbjct: 970 EKFWILLENREHDYAVARILDKYR 993 >gi|297701818|ref|XP_002827895.1| PREDICTED: fas-binding factor 1-like [Pongo abelii] Length = 1155 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 54/188 (28%), Gaps = 20/188 (10%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 +E LQ L AR + + + + L Q RL L R Sbjct: 662 QQREERLQRENEELSARYLSHCQEAEQARAELTAQHQRRLAAMAQEKDQEMERLRELQRA 721 Query: 335 LEHNLEIIIFRKYRHFNHI------------INRIKSDFLIHNIQKNRQHILEKQQHIEQ 382 ++ + + + + + +IH ++K + E +E Sbjct: 722 SILDMRRDHEEQLQRLKLLKDREVDAATSATSHTRSLNSIIHQMEKFSSSLHELSSRVEA 781 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + L +++ L L+E+ + + I + Sbjct: 782 SHLTTSQERELGIRQRDEQLRALQERLGQQQRDMEEE--------RSRQQEVIGKMEARL 833 Query: 443 SITTRILQ 450 + +R+L+ Sbjct: 834 NEQSRLLE 841 >gi|297462058|ref|XP_887804.4| PREDICTED: myosin, heavy chain 14 isoform 4 [Bos taurus] gi|297485855|ref|XP_002695172.1| PREDICTED: myosin, heavy polypeptide 14-like [Bos taurus] gi|296477596|gb|DAA19711.1| myosin, heavy polypeptide 14-like [Bos taurus] Length = 2006 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 18/244 (7%), Positives = 58/244 (23%), Gaps = 27/244 (11%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + L + + I + + + + L ++ + R R Sbjct: 1672 LRKMQAQMKELWREVEETRSSREEIFAQNRESEKRLKGLEAEVLRLQEELAASDRARRQA 1731 Query: 331 LPRELEHNLEIII-----FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 E E+ + R+ +++ +L + + Sbjct: 1732 QQERDEMADEVANGSLSKAAILDEKRQLEGRLGQMEEELEEEQSNAELLNDRYRKLLLQV 1791 Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 + L ++ A R+Q + ++ L + + I + + ++ Sbjct: 1792 ESLTTELSAERSFSAKAESGRQQLERQVQELRERLGEEDAGARARQKMIIAALESKLAQA 1851 Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKR--------NL----ATKTRILINFFDGQ 493 L+ + + L + + + ++ G Sbjct: 1852 EEQLEQESRERILS----------GKLVRRAEKRLKEVVLQVEEERRVADQLRDQLEKGN 1901 Query: 494 ANAI 497 Sbjct: 1902 LRVK 1905 >gi|289547877|ref|YP_003472865.1| secretion protein HlyD [Thermocrinis albus DSM 14484] gi|289181494|gb|ADC88738.1| secretion protein HlyD family protein [Thermocrinis albus DSM 14484] Length = 374 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 10/262 (3%) Query: 232 IVRAIANSSIPIISAIGHETDWTLADYA---ADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 + I + I I H ++ ++D AD A V + Sbjct: 10 VSLLIVAFVLYGILWIKHRREYAISDAVFVKADRMANVGFQVDGKVTRVY-VNLGDHVRK 68 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 L + + K++TL + +KAL + + L RL I + Sbjct: 69 GDILAELDPSDYQLKVDTLEAQIKALESQRRQLEIQYKRLTEQLSLQLKA--SRITEEEV 126 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + + L ++K + + + + RY ++ + K+ + + Sbjct: 127 MAKERALLHQMEELDAQLKKVSKDRERYEDLTRKGLFPLQRYEEIDTQYKVLLEKRRALE 186 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG---YTSI 465 L + IT + +++ + +++ + L + YT + Sbjct: 187 KNLEELRLSYQKSQSITHLHRADLMRLEELRQQIQSLENQIEALKKQKELAQNQLQYTYL 246 Query: 466 QDTNNNFITQKRNLATKTRILI 487 + + I + R ++ I Sbjct: 247 RAPFDGVIAK-RFVSPGDVIRA 267 >gi|218698537|ref|YP_002406166.1| hypothetical protein ECIAI39_0117 [Escherichia coli IAI39] gi|218368523|emb|CAR16258.1| conserved hypothetical protein [Escherichia coli IAI39] Length = 617 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 18/188 (9%), Positives = 50/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P Sbjct: 430 AAQRFNEAENYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQIQ 489 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNI---QKNRQH 372 Q +R R+ E + + + + RI+S +K +Q Sbjct: 490 QRREAARERIQSASPEQRQAVREKMQTNPQNQQRREAARERIQSATPEQRQVFKEKVQQR 549 Query: 373 ILEKQQH---IEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 L +QQ ++I + +++ + + + + + R+ Sbjct: 550 PLNQQQRDNARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTVRLNNEQRSAVRERLSE 609 Query: 430 ILSHKIKS 437 + +++ Sbjct: 610 RGARRLER 617 >gi|195174684|ref|XP_002028102.1| GL21321 [Drosophila persimilis] gi|194115842|gb|EDW37885.1| GL21321 [Drosophila persimilis] Length = 252 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 6/89 (6%) Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI--KKL 423 + + R + + +E + R +E++ L E + R+ L + L Sbjct: 46 LDRLRDFLEPLRDFLEPL---RDRECLDPLRERLEPLRERLEPLRERLEPLRERLEPDPL 102 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSF 452 R++ L +++ + L+ Sbjct: 103 RERLDP-LRERLEPLRERLEPLRERLEPL 130 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 6/123 (4%) Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 RL ++ L + D L ++ R + + LR Sbjct: 17 RLEVPIDPALPDRERSWEPFLFLFGDSTLLDRLRDFLEPLRDFLEPLRDR---ECLDPLR 73 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFY--LHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 +E++ L E + R+ L + L R+E L +++ + Sbjct: 74 ERLEPLRERLEPLRERLEPLRERLEPDPLRERLDPLRERLEP-LRERLEPLRERLEPLRD 132 Query: 448 ILQ 450 L+ Sbjct: 133 RLE 135 >gi|118365373|ref|XP_001015907.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena thermophila] gi|89297674|gb|EAR95662.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena thermophila SB210] Length = 1285 Score = 37.4 bits (85), Expect = 6.5, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 53/169 (31%), Gaps = 3/169 (1%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 L R+ + K + ++ L + E L+ R Sbjct: 575 EELRQRVKQLEEENAILKSKLDGDNKEWSTRYKDLEDMMNRKISELTKYYEDLLKAAERR 634 Query: 346 KYRHFNHIIN--RIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 + + + + L + Q I+E++ + + + ++ + ++ + Sbjct: 635 RINDLDELERLRVKQLKDLEDKLNSEMQRIIEEKDRLFKEMNDKFQHHIQQLEQNWQSKY 694 Query: 404 MLREQTKNR-IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 EQ KN+ I L +K I ++ ++ R L++ Sbjct: 695 KEMEQLKNKKIQELEDQHRKTIDSMKKEHQRQLDELRNYYEEQIRKLKA 743 >gi|122920502|pdb|2I1J|A Chain A, Moesin From Spodoptera Frugiperda At 2.1 Angstroms Resolution gi|122920505|pdb|2I1K|A Chain A, Moesin From Spodoptera Frugiperda Reveals The Coiled-Coil Domain At 3.0 Angstrom Resolution gi|118133213|gb|ABK60307.1| moesin [Spodoptera frugiperda] Length = 575 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 10/124 (8%), Positives = 38/124 (30%), Gaps = 5/124 (4%) Query: 327 RLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQ 386 R+ L + + + + L Q+ + + + + +Q Sbjct: 279 RILALCMGNHELYMRRRKPDTIDVQQMKAQAREEKLAKQAQREKLQLEIAARERAEKKQQ 338 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + + +E++ + ++ I L +++L +++ + Sbjct: 339 EYQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQL-----QAAKEELEQRQNELQAMM 393 Query: 447 RILQ 450 + L+ Sbjct: 394 QRLE 397 >gi|117920015|ref|YP_869207.1| chromosome segregation protein SMC [Shewanella sp. ANA-3] gi|117612347|gb|ABK47801.1| chromosome segregation protein SMC [Shewanella sp. ANA-3] Length = 1142 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 39/319 (12%), Positives = 91/319 (28%), Gaps = 15/319 (4%) Query: 147 IIAVITSPTGAVIRDILQRISC----RFPLRVIIFPVKVQGDECPKEIANAILQLNTLKE 202 +A +T + Q R ++ + Q + K +Q+ E Sbjct: 465 TLAAVTHTLDVARGEFEQLSQRLTSMRARFELVEQWLAKQEELSDKPQLWQSIQVENGWE 524 Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWT----LADY 258 ++ G + ++ + D + + PI+ A + W AD Sbjct: 525 AAAELALQGLMTLPVGVNANEIGFYADAALSADVHLDGSPILDAKLNLAPWLKGLKWADN 584 Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTL-----NSLLKA 313 A +A P+ AA+ + + L A+ +N + K T +A Sbjct: 585 LASAQAQLPSLAADERIVTADGYLLGKGFLIAKQDNSQSLVQLSKEQTQLSEAIAECEQA 644 Query: 314 LPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 L +L ++ L + + + ++ + R + Sbjct: 645 KAIQQAKLDELAQQLTQVRDSLSQGTKRLHQLQLDKATKSTQLNNAEAQAKQREAKRGQL 704 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 E + + + + L +++ + L + + + L Sbjct: 705 AETVARTQAELAELAEQLMLLAEQEDELAEALEVSLEQQQQQSQDAQGDMAR--HQALKA 762 Query: 434 KIKSCHTSVSITTRILQSF 452 +I ++ LQS Sbjct: 763 QIGDAERRLASLNASLQSV 781 >gi|325499907|gb|EGC97766.1| tail length tape measure protein from prophage [Escherichia fergusonii ECD227] Length = 1021 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|312967375|ref|ZP_07781590.1| phage tail tape measure protein, lambda family [Escherichia coli 2362-75] gi|312287572|gb|EFR15477.1| phage tail tape measure protein, lambda family [Escherichia coli 2362-75] Length = 1018 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQTVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|307183173|gb|EFN70082.1| Nucleoprotein TPR [Camponotus floridanus] Length = 2354 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 14/181 (7%), Positives = 50/181 (27%), Gaps = 2/181 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 E + + + + + L + + + + Sbjct: 691 EKMLSEEVERLRKEAEANSARCCRLRAQLDSANERFTLLQGNVASYKSQIKALEEKCTNY 750 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLR 389 + + + ++ K +++ + N+++ RQ + + + + E+ V Q R Sbjct: 751 NITIGKHEQSLMILKDETLAAQTRLARAEVQLENLRQERQLLKDSEGRLLKEREVYQRER 810 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + + E+ + R L +++ L Sbjct: 811 QTQVLLRADMESIKASLERVQAEGHLRAEQRFDDANRECAALRRRLQEEQDRFRELAGHL 870 Query: 450 Q 450 + Sbjct: 871 E 871 >gi|294493225|gb|ADE91981.1| prophage tail length tape measure protein, putative [Escherichia coli IHE3034] Length = 1021 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATDRMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|218705037|ref|YP_002412556.1| putative tail length tape measure protein [Escherichia coli UMN026] gi|218432134|emb|CAR13022.1| putative tail length tape measure protein from putative prophage [Escherichia coli UMN026] Length = 1031 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I + +D + + R++ ++ + K+ E Sbjct: 572 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 630 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689 Query: 457 TLKR 460 L R Sbjct: 690 VLAR 693 >gi|167537971|ref|XP_001750652.1| hypothetical protein [Monosiga brevicollis MX1] gi|163770858|gb|EDQ84536.1| predicted protein [Monosiga brevicollis MX1] Length = 2016 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 17/198 (8%), Positives = 53/198 (26%), Gaps = 16/198 (8%) Query: 254 TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKA 313 TL ++ D A + ++ + + + L + Sbjct: 190 TLLEHGVDAEAKDEREPPTLTQCIRVGTLRQRAQCSDVSAPLSAKSLPEAWEQLCQAHER 249 Query: 314 LPNSDQ--TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 L + Q + +R + + L ++ + + I Sbjct: 250 LSSPKQNGLEQLADWRAEHDYEHQDWYLAFVLHETQALLQQLQDMIDWQA---------- 299 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 K + + K++ I +++ +H + + +I + + + + Sbjct: 300 ----KTLSVVTLCKEYASSITQSSADQVVSIHEEVAELQKKIQATTAFLAFVSDDMRAGI 355 Query: 432 SHKIKSCHTSVSITTRIL 449 + +S + L Sbjct: 356 QANLDEEKERLSTLQQQL 373 >gi|148609395|ref|YP_001272526.1| putative tail protein [Phage cdtI] gi|148524724|dbj|BAF63346.1| putative tail protein [Phage cdtI] Length = 1018 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQTVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|149716493|ref|XP_001501846.1| PREDICTED: DIX domain containing 1 [Equus caballus] Length = 683 Score = 37.4 bits (85), Expect = 6.6, Method: Composition-based stats. Identities = 16/189 (8%), Positives = 49/189 (25%), Gaps = 18/189 (9%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ ++ + K + L D R L Sbjct: 275 YLETSWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEE 334 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 ++ + + + + + + QQ + Q L+ Sbjct: 335 QLIIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQEL 392 Query: 395 KKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + + + + ++ + + + + ++ + R L Sbjct: 393 LRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-DRLLQQHQAKLEEALRKLSEA 451 Query: 453 AYKNT-LKR 460 +Y+ L+R Sbjct: 452 SYQQVDLER 460 >gi|325116020|emb|CBZ51574.1| conserved hypothetical protein [Neospora caninum Liverpool] Length = 1179 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 9/84 (10%), Positives = 24/84 (28%), Gaps = 4/84 (4%) Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + + + + + R + L REQ + + L R+ Sbjct: 811 LAARHEELLARDEALNRLRTWWLDYAVQQLEHEREQAEKARERHEAQLGSLRARLSS--- 867 Query: 433 HKIKSCHTSVSITTRILQSFAYKN 456 ++ +S ++ S + Sbjct: 868 -LLRRKGLHLSDVVALVSSLSPLA 890 >gi|323186587|gb|EFZ71925.1| phage tail tape measure protein, lambda family [Escherichia coli 1357] Length = 724 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 238 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 297 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 298 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 357 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 358 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 391 >gi|315294645|gb|EFU53992.1| conserved hypothetical protein [Escherichia coli MS 153-1] Length = 593 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 13/179 (7%), Positives = 43/179 (24%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA A + + + N + + L K Sbjct: 415 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQR 474 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + R + + R + + + +Q N Q+ ++ Sbjct: 475 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 534 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 ++I + +++ + + + + R+ + +++ Sbjct: 535 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 593 >gi|307212505|gb|EFN88236.1| Nucleoprotein TPR [Harpegnathos saltator] Length = 2322 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 18/181 (9%), Positives = 51/181 (28%), Gaps = 2/181 (1%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 E + + + + + L + + + + + Sbjct: 701 EKMLSEEVERLRKEAEANSTRCCRLKAQLDSANERFTLLQGNVSSYKTQIKVLEEKCNNY 760 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLR 389 + + + I+ K N +++ + N++ RQ + + + + E+ V Q R Sbjct: 761 NITIGKHEQSIMILKDETLAAQSNLSRAEVQLENLRHERQLLRDSEGRLLKEREVYQRER 820 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 K + + E+ + R L +++ T L Sbjct: 821 QTQALLKADMESIKASLERVQAEGQLRAEQRFDDANRECAALRRRLQEEQDRFRDLTAHL 880 Query: 450 Q 450 + Sbjct: 881 E 881 >gi|301762064|ref|XP_002916477.1| PREDICTED: myosin-7B-like [Ailuropoda melanoleuca] Length = 1892 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 1/137 (0%) Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L + R + R + + L + + + Sbjct: 1544 LRRNHQRAVESLQASLDAETRARNEALRLKKKMEGDLNDLELQLGHAARQSMEAQAATRL 1603 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 Q + + E++ A L + + R L T +++L +E + + Sbjct: 1604 LQAQLKEEQAGRDEEQRLAAELREQAQALERRAALLATELEELRAALEQGERSR-RLAEQ 1662 Query: 441 SVSITTRILQSFAYKNT 457 + T L +NT Sbjct: 1663 ELLEATERLNLLHSQNT 1679 >gi|260551249|ref|ZP_05825451.1| ABC transporter [Acinetobacter sp. RUH2624] gi|260405706|gb|EEW99196.1| ABC transporter [Acinetobacter sp. RUH2624] Length = 527 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 23/200 (11%), Positives = 61/200 (30%), Gaps = 10/200 (5%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 DL P + + + L+ L + L LK P Sbjct: 136 TDLNFPVKQLSEGQKTKLALAALFLKTDHYLLLDEPSNHLDQDARQWLIHHLKKHPAGAL 195 Query: 320 TLSC---SRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 +S +D + EH L+ + R++ L ++ ++++ + Sbjct: 196 IISHDLTLLNEVDHIYHLNEHGLQHTTGNYEIFYEQYQTRVE--ALEQSVHQHQREVKHM 253 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 +Q ++ + + K + + Q K + + + + I+ +I+ Sbjct: 254 KQKQHDVLMKAQKRERAGNKLRDSNS-----QAKILLDFKKEQAGQSLGAIQSQHHRQIE 308 Query: 437 SCHTSVSITTRILQSFAYKN 456 + +L++ + Sbjct: 309 QSQQDLKNKKSLLETVKPQQ 328 >gi|218551664|ref|YP_002385456.1| tail length tape measure protein from prophage [Escherichia fergusonii ATCC 35469] gi|218359206|emb|CAQ91871.1| putative tail length tape measure protein from putative prophage [Escherichia fergusonii ATCC 35469] Length = 1031 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 512 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 571 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 572 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 630 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 631 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 689 Query: 457 TLKR 460 L R Sbjct: 690 VLAR 693 >gi|194379634|dbj|BAG63783.1| unnamed protein product [Homo sapiens] Length = 1642 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1274 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1333 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1334 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1393 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1394 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1453 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1454 NMEKLTEERDQRIAA 1468 >gi|194043280|ref|XP_001924987.1| PREDICTED: protein SFI1 homolog [Sus scrofa] Length = 1238 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 26/284 (9%), Positives = 68/284 (23%), Gaps = 13/284 (4%) Query: 173 RVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMI 232 + +Q C + A Q + R + L R + E + Sbjct: 313 ERFHYVTVLQAHFCDWQWAWERRQSLYAHQARVKGLARRMALRRAFTHWKHYVLLCAEAV 372 Query: 233 VRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARL 292 + L + T A + Q + L R Sbjct: 373 IWRKGAEE---------HRRRCLLHFCFRALKDNVTRAHLQRMRRNLAHQQHHVMLLRRF 423 Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRY----RLDRLPRELEHNLEIIIFRKYR 348 N+ I+ + + ++ R L + L + Sbjct: 424 WNVWQSRIEQREEREHLPSLCAAWDHYRVTLLRQCFKSWLQYTRKRRSQQLLQARADSHF 483 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + ++ + ++ Q + + + + + + +K + L E+ Sbjct: 484 QQRALPAAFQAWRRLWQWRQQEQVLSARAMCFHREMLEKQVFAVWCQKMSQRRDYRLAER 543 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + T + + ++ +V+ L+ Sbjct: 544 MAILHAERQLLRRHWSTWCQQAAACCLEQLWQAVARAHHRLERL 587 >gi|145481655|ref|XP_001426850.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393927|emb|CAK59452.1| unnamed protein product [Paramecium tetraurelia] Length = 416 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 12/161 (7%), Positives = 52/161 (32%), Gaps = 1/161 (0%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 + + ++ + K++ + + + + + R + ++ E L Sbjct: 211 QQSFEHQEGIKYRSHQIFQNKLSKVQNKMNYFQDKINQIEKKRLQQLQMNYLQEQELNQK 270 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 +I + L ++K + + Q+ ++ ++ R + + + Sbjct: 271 RNDVRAKSENIYRNKSLNILNKYLEKEKSFQQVQSQNQIELQQKLQRLNEKWQTHQNQVQ 330 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS 443 + ++ L + + R++ + +K+ + Sbjct: 331 KAD-QLKQSYFSSLEQKMTQRDQRLQDQIQNKLDVQKRRLK 370 >gi|26246057|ref|NP_752096.1| hypothetical protein c0146 [Escherichia coli CFT073] gi|227884972|ref|ZP_04002777.1| conserved hypothetical protein [Escherichia coli 83972] gi|300993776|ref|ZP_07180542.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|301049980|ref|ZP_07196897.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|26106454|gb|AAN78640.1|AE016755_140 Hypothetical protein yacH [Escherichia coli CFT073] gi|227838110|gb|EEJ48576.1| conserved hypothetical protein [Escherichia coli 83972] gi|300298282|gb|EFJ54667.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300406480|gb|EFJ90018.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|307551968|gb|ADN44743.1| putative membrane protein [Escherichia coli ABU 83972] Length = 593 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 13/179 (7%), Positives = 43/179 (24%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA A + + + N + + L K Sbjct: 415 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQR 474 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + R + + R + + + +Q N Q+ ++ Sbjct: 475 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 534 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 ++I + +++ + + + + R+ + +++ Sbjct: 535 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 593 >gi|89094702|ref|ZP_01167638.1| hypothetical protein MED92_02424 [Oceanospirillum sp. MED92] gi|89081048|gb|EAR60284.1| hypothetical protein MED92_02424 [Oceanospirillum sp. MED92] Length = 1067 Score = 37.4 bits (85), Expect = 6.7, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 2/138 (1%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + Q L +L + R L ++E + + S LI + + Sbjct: 256 QAIQLLRKENQQLSQQLRALLVDIESYDQERRAEQIRLSQLTTSFNLIRQQLELEVSHIT 315 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 Q I+ I + + ++IA L + R Q + R+ + + + ++ Sbjct: 316 PAQ-IQFIFENRTAQDTRKVSQEIAQLRLQRAQLEQRLNVSGDK-QATQEAMPSLNKAQL 373 Query: 436 KSCHTSVSITTRILQSFA 453 + + ++L + Sbjct: 374 RRFQNLLDDQKQLLNQLS 391 >gi|301782741|ref|XP_002926787.1| PREDICTED: nuclear factor erythroid 2-related factor 2-like [Ailuropoda melanoleuca] Length = 606 Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 101/312 (32%), Gaps = 26/312 (8%) Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI------PIISAIGHETDWTLA 256 D+ + + + FND ++ S + S++ +T + Sbjct: 315 NGPIDVSDLSLCKAFNQNHPETTEFNDSDSGISLNTSPCMASPEHSVESSVYGDTPLGFS 374 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D + G+ + P + +QS+ ++ + N+ K LP Sbjct: 375 DSEM-EEIDSAPGSVKQNGPKTQPVQSAGDTAQSPSPSPGHSAPARDAQCENTPKKELP- 432 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 +S + + LE + R + + I N+ + + + Sbjct: 433 ----VSPGHRKTPFTKDKHSSRLEAHLTRDELRAKAL-HIPFPVEKIINLPVDDFNEMMS 487 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 ++ + +R I K K+A + + + +N I L + L E +L K + Sbjct: 488 KEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLEN-IVELEQDLDHLKDEKEKLLKEKGE 546 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 + + + + + L + Y ++ ++D + + + DG Sbjct: 547 NDKS-LHLLKKQLSTL-YLEV----FSMLRDEDGKP-YSPSEYSLQQT-----RDGNVFL 594 Query: 497 IVINKAPPKEQP 508 + +K P ++ Sbjct: 595 VPKSKKPDTKKN 606 >gi|118091189|ref|XP_427678.2| PREDICTED: similar to Peripheral-type benzodiazepine receptor-associated protein 1 (PRAX-1) (RIM-binding protein 1) (RIM-BP1), partial [Gallus gallus] Length = 652 Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats. Identities = 35/329 (10%), Positives = 91/329 (27%), Gaps = 22/329 (6%) Query: 93 TTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVIT 152 T F G QI + L + + + ++ +Q T Sbjct: 57 TAFGGRGSLQIRVAMLREAAKREQQLLANQLRCAWEKQQAQEEQRLKEREQW----QRAT 112 Query: 153 SPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDII 212 + + + + L+ Q E + +A + + D++ Sbjct: 113 ETRQLLRWKEAELHATKELLQRECDAALRQARELQQLLAQELRSPHRSIWEARAKLQDVL 172 Query: 213 ILARGGGSIEDLWH--------------FNDEMIVRAIANSSIPIISAIGHETDWTLADY 258 R E FN ++ + + S + + + Sbjct: 173 SKLRWETDGEQPACIRHLQHQLELERRLFNQYIVGSWEGEPKL-VDSHAAKDAHVQVPET 231 Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 A + + P + E + + RL + + ++ L + Sbjct: 232 AKEDLGLPGRRPSTNRGPGQLLADRLRSKWERERASKLQRLREQSQRQRETEIRQLLQAK 291 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + + R +RL ++ + + + ++ S +Q+ Q L + Sbjct: 292 E--AQLRQMQERLQKQRNDTVRQAWHLQRQLVEELLRG-DSSSGERRVQQEVQRQLCWKP 348 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLRE 407 EQ L+++ + + ++L+ Sbjct: 349 RGEQAAHVLRLQRELQEQRRGFLQYILQH 377 >gi|194429902|ref|ZP_03062413.1| gifsy-1 prophage VmtH [Escherichia coli B171] gi|194412058|gb|EDX28369.1| gifsy-1 prophage VmtH [Escherichia coli B171] Length = 1018 Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATDRMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|223932493|ref|ZP_03624494.1| DNA polymerase III, alpha subunit [Streptococcus suis 89/1591] gi|330833069|ref|YP_004401894.1| DNA polymerase III subunit alpha [Streptococcus suis ST3] gi|223898764|gb|EEF65124.1| DNA polymerase III, alpha subunit [Streptococcus suis 89/1591] gi|329307292|gb|AEB81708.1| DNA polymerase III alpha subunit [Streptococcus suis ST3] Length = 1036 Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + + D +D ++ + + + EEG + G++ + Q+++E L P Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969 Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137 LE R+ + Sbjct: 970 EKFWILLENREHDYAVARILDKYR 993 >gi|218439930|ref|YP_002378259.1| pseudouridine synthase [Cyanothece sp. PCC 7424] gi|218172658|gb|ACK71391.1| pseudouridine synthase [Cyanothece sp. PCC 7424] Length = 548 Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 43/135 (31%), Gaps = 13/135 (9%) Query: 319 QTLSCSRYRLDRLPR-ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 L + + L + + + + + + + + + ++ R + K Sbjct: 117 NLLEEIKQNILSLQTLTDRYIYQNLSEEFAQKLDQLTTTHQHNKQQRHQKRERLKLTFKG 176 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + Q +++ + LEK E+ + H E + + KI+ Sbjct: 177 EILTQALEELNQQSRLEKIERRQLKHQRDETLNPLLEKI------------SSADEKIRH 224 Query: 438 CHTSVSITTRILQSF 452 I +R LQ Sbjct: 225 LKQRRKILSRQLQHL 239 >gi|332811527|ref|XP_003308718.1| PREDICTED: kinesin-like protein KIF21B-like [Pan troglodytes] Length = 1365 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 16/214 (7%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 +L P+P G E+ + I ++ +L + + + + + L Sbjct: 359 GNLHPPSPRGCLEVNFQADLADLTCEIEIKQKLIDELENSQRRLQTLKHQYEEKLILLQN 418 Query: 320 TLSCSRYRLDR-------LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 + ++ DR + E I + + ++ + QK Sbjct: 419 KIRDTQLERDRVLQNLSTMECYTEEKANKIKADYEKRLREMNRDLQK---LQAAQKEHAR 475 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI------FYLHTHIKKLITR 426 +L+ Q E+ +K+ + KK K+A++ +RE+ + R +KK R Sbjct: 476 LLKNQSRYERELKKLQAEVAEMKKAKVALMKQMREEQQRRRLVETKRNREIAQLKKEQRR 535 Query: 427 IEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 EF + + R Q + L + Sbjct: 536 QEFQIRALESQKRQQEMVLRRKTQEVSALRRLAK 569 >gi|308477764|ref|XP_003101095.1| CRE-TWK-2 protein [Caenorhabditis remanei] gi|308264226|gb|EFP08179.1| CRE-TWK-2 protein [Caenorhabditis remanei] Length = 1528 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 19/228 (8%), Positives = 60/228 (26%), Gaps = 9/228 (3%) Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 S +D + + I+ + A + D + +M + Sbjct: 1305 SNDDEHPLDGPHTILHAVQCPKKFIATVAPTEVADTACFVCDSNL----VSMQMIEEDAD 1360 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 H+ + T L + + ++ R+ + + Sbjct: 1361 HIHWKQTMSTTHYYATDNWKDDFYRVTPLMCRGVLRGAYKVGKDRSGKIQRVDIIRVYRV 1420 Query: 340 EIIIFRKYRH--FNHIINRIKSDFLIHNI-QKNRQHILEKQQHIEQIV--KQHLRYIFLE 394 F+ +I+ +++ + K +Q + + + + + R+ Sbjct: 1421 TRHFSCWKTVPIFHRVISLVEAALPYKQMTSKQKQLLKANGNKLINRLFIQYYWRFQQSF 1480 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + + + R + K + R+ S + ++ Sbjct: 1481 VNREQVLNEYAESSKRTRAKKSWIRVVKNVARLRAATSILAAARKNTL 1528 >gi|301762084|ref|XP_002916453.1| PREDICTED: centrosome-associated protein CEP250-like [Ailuropoda melanoleuca] gi|281346056|gb|EFB21640.1| hypothetical protein PANDA_004532 [Ailuropoda melanoleuca] Length = 2442 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 25/204 (12%), Positives = 58/204 (28%), Gaps = 4/204 (1%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D E KE L L + + R+ + + Q Sbjct: 1627 DQELKCQREQIEELQRQKERLAQDLERRDQDMLLQRERIRVLEDQRTLQTKILEEDLGQI 1686 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + R L ++ ++ LI ++ +++ Sbjct: 1687 KLSLKERGRELA-SQRPPMQERAEEGKSPSKAQRGSLEHLKLILRDKEKEVECQQERLQE 1745 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE---FILSHKIKS 437 + K L K+ +L Q + + L H+++ R E L ++ Sbjct: 1746 LRGHKDQLEQQLQGLHRKVGETSLLLSQREQELVVLQRHLQEARERAELKERSLQGHLEE 1805 Query: 438 CHTSVSITTRILQSFAYKNTLKRG 461 +++ + L++ ++ RG Sbjct: 1806 AQRALAQRDQELEALRHEQQQARG 1829 >gi|220939485|emb|CAI35197.2| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] gi|220941683|emb|CAI26157.2| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] Length = 1185 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 E I R + R+ R ++ + Sbjct: 668 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 727 Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399 ++ + R K+ L I RQ Q + + R +K++ Sbjct: 728 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 787 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450 L + + +++ R + L +++ + TR+L+ Sbjct: 788 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 840 >gi|218246876|ref|YP_002372247.1| hypothetical protein PCC8801_2059 [Cyanothece sp. PCC 8801] gi|257059918|ref|YP_003137806.1| protein with the myosin-like domain [Cyanothece sp. PCC 8802] gi|218167354|gb|ACK66091.1| conserved hypothetical protein [Cyanothece sp. PCC 8801] gi|256590084|gb|ACV00971.1| uncharacterized protein with the myosin-like domain [Cyanothece sp. PCC 8802] Length = 489 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 42/137 (30%), Gaps = 3/137 (2%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 D+ L R L + E+ K + + + N +K +Q + Sbjct: 79 DEILKQLRIAQADLEQVGREKQEVSQELKTAKQQQNKAQQRLLSINQNFKKAQQQLGSVS 138 Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 +++ + + + ++ L Q + +I + K +I + + Sbjct: 139 NQAKKLRQDIETLLKERESLLQRKTELDGQISQLQAQIRDRDQELTKGQQKITD-QNRIL 197 Query: 436 KSCHTSVSITTRILQSF 452 + T + L + Sbjct: 198 QQRQTRLQALENRLNAL 214 >gi|112961114|gb|ABI28176.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961117|gb|ABI28178.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961120|gb|ABI28180.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961123|gb|ABI28182.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961126|gb|ABI28184.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961129|gb|ABI28186.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961132|gb|ABI28188.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961135|gb|ABI28190.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961138|gb|ABI28192.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961141|gb|ABI28194.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961144|gb|ABI28196.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961147|gb|ABI28198.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961150|gb|ABI28200.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961153|gb|ABI28202.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961156|gb|ABI28204.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961159|gb|ABI28206.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961162|gb|ABI28208.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961165|gb|ABI28210.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961168|gb|ABI28212.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961171|gb|ABI28214.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961177|gb|ABI28218.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961183|gb|ABI28222.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961186|gb|ABI28224.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961189|gb|ABI28226.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961192|gb|ABI28228.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961195|gb|ABI28230.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961198|gb|ABI28232.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961201|gb|ABI28234.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961204|gb|ABI28236.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961207|gb|ABI28238.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961210|gb|ABI28240.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961213|gb|ABI28242.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961216|gb|ABI28244.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961219|gb|ABI28246.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961222|gb|ABI28248.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961225|gb|ABI28250.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961228|gb|ABI28252.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961231|gb|ABI28254.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961234|gb|ABI28256.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961237|gb|ABI28258.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961240|gb|ABI28260.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961243|gb|ABI28262.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961246|gb|ABI28264.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961249|gb|ABI28266.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961252|gb|ABI28268.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961255|gb|ABI28270.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961258|gb|ABI28272.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961261|gb|ABI28274.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961264|gb|ABI28276.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961267|gb|ABI28278.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961270|gb|ABI28280.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961273|gb|ABI28282.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961276|gb|ABI28284.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961279|gb|ABI28286.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961282|gb|ABI28288.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961285|gb|ABI28290.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961288|gb|ABI28292.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961291|gb|ABI28294.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961294|gb|ABI28296.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961297|gb|ABI28298.1| DNA polymerase III alpha subunit [Listeria monocytogenes] Length = 454 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 310 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 367 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 368 ELQLIINKAE 377 >gi|160897767|ref|YP_001563349.1| mechanosensitive ion channel protein MscS [Delftia acidovorans SPH-1] gi|160363351|gb|ABX34964.1| MscS Mechanosensitive ion channel [Delftia acidovorans SPH-1] Length = 1127 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 27/98 (27%), Gaps = 9/98 (9%) Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + ++R+ +LE E+ R L + + +L + Sbjct: 180 LTQARQARRSAEHRRALLELALRQEEQSTIEARQRLLAAQLQAQRRELLERMPRA----- 234 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 L RI +++ + + + + Sbjct: 235 ----AWLTQRIAERSRQQLEQQVQEMELAAQHASAADP 268 >gi|120611309|ref|YP_970987.1| UvrD/REP helicase [Acidovorax citrulli AAC00-1] gi|120589773|gb|ABM33213.1| DNA helicase/exodeoxyribonuclease V, subunit A [Acidovorax citrulli AAC00-1] Length = 1168 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 14/51 (27%), Gaps = 3/51 (5%) Query: 481 TKTRILINF--FDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGELF 529 + F DG+ V + A P + QG LF Sbjct: 1118 PGEPVRAAFLTGDGRM-VEVDSSARGGPAPAQPLPSPTPAAGPSPVQGSLF 1167 >gi|157869642|ref|XP_001683372.1| hypothetical protein [Leishmania major strain Friedlin] gi|68126437|emb|CAJ04149.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 1394 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 12/205 (5%), Positives = 53/205 (25%), Gaps = 20/205 (9%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + + L ++++ R+ + L + L ++ R ++ Sbjct: 512 QQWQSCARDIQQLRTDMSSVQPRVAEAVQQAKAELADVWDAKVRLLEERTQQMHRERQQQ 571 Query: 336 EHNLEIIIFRKYRHFNHIINR--IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + + + R + + +++ + + + V+ Sbjct: 572 TDTQLRQLQQTLAEQQEALQRARVVGESADERLRRTEAALASVEATLPPAVEGVRARCEA 631 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT---RIEFILSHKIKSCHT---------- 440 + + + + I ++ R+ + ++ Sbjct: 632 LQGLIQQTCVLPLTRVQQDIEEAQRKLQTAEEDRIRLNSSWAQQLAEARQYHEERARHTR 691 Query: 441 -----SVSITTRILQSFAYKNTLKR 460 ++ + + + TL+R Sbjct: 692 EVLEQRLTHHKELFEELRTQQTLQR 716 >gi|56238585|emb|CAI26156.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] gi|56800519|emb|CAI35196.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] Length = 1184 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 E I R + R+ R ++ + Sbjct: 667 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 726 Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399 ++ + R K+ L I RQ Q + + R +K++ Sbjct: 727 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 786 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450 L + + +++ R + L +++ + TR+L+ Sbjct: 787 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 839 >gi|324008303|gb|EGB77522.1| hypothetical protein HMPREF9532_01996 [Escherichia coli MS 57-2] Length = 585 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 13/179 (7%), Positives = 43/179 (24%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA A + + + N + + L K Sbjct: 407 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQR 466 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + R + + R + + + +Q N Q+ ++ Sbjct: 467 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 526 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 ++I + +++ + + + + R+ + +++ Sbjct: 527 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 585 >gi|312623360|ref|YP_004024973.1| hypothetical protein Calkro_2331 [Caldicellulosiruptor kronotskyensis 2002] gi|312203827|gb|ADQ47154.1| hypothetical protein Calkro_2331 [Caldicellulosiruptor kronotskyensis 2002] Length = 191 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 4/57 (7%), Positives = 25/57 (43%), Gaps = 1/57 (1%) Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 K+++ + ++ + R+ + + ++ R++ + ++ + + + L + Sbjct: 26 KQRLDRVEERLDRVEERLDRVEERLDRVEERLDR-VEKRLDAVEQRLDAVEQRLDTL 81 >gi|271498764|ref|YP_003331789.1| hypothetical protein Dd586_0187 [Dickeya dadantii Ech586] gi|270342319|gb|ACZ75084.1| protein of unknown function DUF195 [Dickeya dadantii Ech586] Length = 514 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 46/146 (31%), Gaps = 1/146 (0%) Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + Q L +R +L + + + + + + + + Sbjct: 27 QQQRQARHDTEFRLQQQALEQTRQQLSENQQARQQDQQRLDQQSQELRSLHAQLAAGEEK 86 Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + + + R+ + Q + + +++ E +E L R + + L ++ Sbjct: 87 LRQLAELREECAQLNQEL-RALREANGAQEAELREVTIRLEETRLAAEEKQRLLMNSEQR 145 Query: 423 LITRIEFILSHKIKSCHTSVSITTRI 448 L T+ E + + + V + Sbjct: 146 LSTQFENLANRIFEQTGHKVDQQNQQ 171 >gi|194217372|ref|XP_001504251.2| PREDICTED: myosin XVIIIA isoform 4 [Equus caballus] Length = 2002 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1634 MLDHLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1693 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1694 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKEK 1753 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1754 QELQEKLQTLQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1813 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1814 NMEKLTEERDQRIAA 1828 >gi|71414581|ref|XP_809388.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70873761|gb|EAN87537.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 843 Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats. Identities = 21/196 (10%), Positives = 51/196 (26%), Gaps = 11/196 (5%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + + AE A+ + Q + + +R + + Sbjct: 456 FMIHAQGNIFPRIAEPALAARCLEQWRDSYHFRIADRMFMRRTFLHMKNCFRRRLEIFQL 515 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI--INRIKSDFLIHNIQKNRQ---- 371 ++ R + + +FR + F + L ++ R+ Sbjct: 516 NEIAKAYARRALQQRCLKKWCKTCRLFRLFVQFTRTLGRRFLCQALLTWRLRWVRRTSGG 575 Query: 372 -----HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR 426 + KQQ + H + K+ ++ +T + I+ R Sbjct: 576 DRLRAFLEMKQQRLIVCTFMHWKRKTHLKQLHQQLVFCRLRRTYHMIWNRWVQRVIFHRR 635 Query: 427 IEFILSHKIKSCHTSV 442 +E + H Sbjct: 636 LERDRAALAVFMHQRF 651 >gi|269124843|ref|YP_003298213.1| peptidase S1 and S6 chymotrypsin/Hap [Thermomonospora curvata DSM 43183] gi|268309801|gb|ACY96175.1| peptidase S1 and S6 chymotrypsin/Hap [Thermomonospora curvata DSM 43183] Length = 361 Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPPKEQPTKKCQLHNN-KREK 521 + + IT + RI + F DG+ A A V+ + + Q + + + Sbjct: 172 VVLRADGTIITNAHVVFGAARIQVKFSDGRTATAEVVGADAEHDIAVIRAQGVSGLQPAR 231 Query: 522 QGTQGEL 528 G GEL Sbjct: 232 IGDSGEL 238 >gi|242765533|ref|XP_002340993.1| ftsj, putative [Talaromyces stipitatus ATCC 10500] gi|218724189|gb|EED23606.1| ftsj, putative [Talaromyces stipitatus ATCC 10500] Length = 814 Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 39/115 (33%), Gaps = 3/115 (2%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 NL I + + F + ++ KS N+ + + + +E +K+ R + Sbjct: 133 NLTKEIAQMKQEFERLQHQNKSH---QNLIAEKSALERQLNSLEIQLKEERRAFERNRSI 189 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + +Q R+ +R+E ++ + + L+ Sbjct: 190 EDKKQNSEAQQQLKRLQAELQKETDERSRLEQEINERTTAWEQQKKSLEERLEKL 244 >gi|325928632|ref|ZP_08189814.1| hypothetical protein XPE_3900 [Xanthomonas perforans 91-118] gi|325541003|gb|EGD12563.1| hypothetical protein XPE_3900 [Xanthomonas perforans 91-118] Length = 339 Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 3/133 (2%) Query: 208 RPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTP 267 +++ARGGG + + + RA+ + +P +A+GH D L D AD TP Sbjct: 187 GVKGLVIARGGGERLETIG-DSRNVTRALIETGLPFYAALGHANDVLLLDKHADDVFLTP 245 Query: 268 TGAAEMA--VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 + + + +I+L + L + + + L S+ Sbjct: 246 SDFGHRLRDCLDAAQEAEDARTEASDAEDKLIQLSTKLDRRESELDETRRHLGELLQQSK 305 Query: 326 YRLDRLPRELEHN 338 L EL Sbjct: 306 LDSQGLKAELRQW 318 >gi|112961174|gb|ABI28216.1| DNA polymerase III alpha subunit [Listeria monocytogenes] gi|112961180|gb|ABI28220.1| DNA polymerase III alpha subunit [Listeria monocytogenes] Length = 454 Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats. Identities = 11/70 (15%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 40 EISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSS 99 E+ R + ++ D+ + A+++ + K ++G + K T + Sbjct: 310 EVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADT--RNG 367 Query: 100 KYQIIIESLI 109 + Q+II Sbjct: 368 ELQLIINKAE 377 >gi|52782183|dbj|BAD51938.1| amyloid beta A4 precursor protein [Macaca fascicularis] Length = 696 Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats. Identities = 24/212 (11%), Positives = 56/212 (26%), Gaps = 6/212 (2%) Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGHET----DWTLADYAADLRAPTPTGAAEM 273 GG + +F+ E A+ S IP +A + T D E Sbjct: 322 GGCGGNRNNFDTEEYCMAVCGSVIPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEA 381 Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + R + K + + + + +Q + R +L Sbjct: 382 KHRERMSQVMREWEEAERQAKNLP--KADKKAVIQHFQEKVESLEQEAANERQQLVETHM 439 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 R + H ++++ +Q+ + +K + Sbjct: 440 ARVEATLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMV 499 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + K+ I + + ++ + L Sbjct: 500 DPKKAAQIRSQVMTHLRVIYERMNQSLSLLYN 531 >gi|326668218|ref|XP_002667195.2| PREDICTED: centriolin-like [Danio rerio] Length = 2172 Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 14/145 (9%), Positives = 43/145 (29%), Gaps = 3/145 (2%) Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + + +T + + P + + +K L I+ Sbjct: 370 QKRNIKFPSETENTGTQGQQKHPPASDLTETDSPGDYMSRHAQLAAEMKLQQLHKEIEAR 429 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 Q IL + + Q+ + E ++ L ++ + L ++ + +++ Sbjct: 430 EQQILTASEELRQLEDAVSQRRISEAEK--EQLRQELQRRIQNLGELRGEMEAVEKQLDR 487 Query: 430 ILSHKIKSCHTSVSITTRILQSFAY 454 + + + + +L S Sbjct: 488 LNAER-NQAQDEMEQLQNLLHSLDP 511 >gi|324117960|gb|EGC11859.1| lambda family protein phage tail tape measure protein [Escherichia coli E1167] Length = 1021 Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|324112013|gb|EGC05991.1| lambda family protein phage tail tape measure protein [Escherichia fergusonii B253] Length = 1021 Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|253751378|ref|YP_003024519.1| DNA polymerase III alpha subunit [Streptococcus suis SC84] gi|253753279|ref|YP_003026419.1| DNA polymerase III alpha subunit [Streptococcus suis P1/7] gi|253755890|ref|YP_003029030.1| DNA polymerase III alpha subunit [Streptococcus suis BM407] gi|251815667|emb|CAZ51255.1| DNA polymerase III alpha subunit [Streptococcus suis SC84] gi|251818354|emb|CAZ56178.1| DNA polymerase III alpha subunit [Streptococcus suis BM407] gi|251819524|emb|CAR45104.1| DNA polymerase III alpha subunit [Streptococcus suis P1/7] gi|292557997|gb|ADE30998.1| DNA polymerase III alpha subunit [Streptococcus suis GZ1] gi|319757664|gb|ADV69606.1| DNA polymerase III alpha subunit [Streptococcus suis JS14] Length = 1036 Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + + D +D ++ + + + EEG + G++ + Q+++E L P Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969 Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137 LE R+ + Sbjct: 970 EKFWILLENREHDYAVARILDKYR 993 >gi|148241806|ref|YP_001226963.1| RNA-binding protein [Synechococcus sp. RCC307] gi|147850116|emb|CAK27610.1| Predicted RNA-binding protein [Synechococcus sp. RCC307] Length = 577 Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 20/203 (9%), Positives = 59/203 (29%), Gaps = 9/203 (4%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D P ++ + + Q L L+++ Y+ S ++ Sbjct: 216 DRHTPAADLSSAQWQQLFDSWQQWLSQLDSQALQFASSGSGYRCWGEPSPCQSNTPLALN 275 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 LS +RY L + + + + R + + +H+L++Q + Sbjct: 276 LSLARYYGQGLRQAQCQQQRQRLEQHLQQLVQREQRELQRQELLLARSGDEHLLQRQADL 335 Query: 381 ---EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHK 434 V + + + ++R + + + + ++ + + Sbjct: 336 LLCRSDVSSSGHHQLELQDPESNQTLVVRLNPQQTLVSQAQKLYQRARKLRRSVAAIEPR 395 Query: 435 IKSCHTSVSITTR---ILQSFAY 454 ++ + + LQ Sbjct: 396 LRRHQQRLELLEASQVQLQLADP 418 >gi|145542406|ref|XP_001456890.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124424704|emb|CAK89493.1| unnamed protein product [Paramecium tetraurelia] Length = 1007 Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 58/154 (37%), Gaps = 2/154 (1%) Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 K + + + L Q L SR E N + + + I I+ ++ Sbjct: 467 QKTEKYDRIREKLNQIQQQLDVSRDTPSYQIAERNRNFQKELINIKIEIDSIEKEIELEY 526 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTH 419 L + +Q+++ ++ K Q++ + K + L+ ++ ++I L Sbjct: 527 LANKLQRDKLNLQNKSQNLFRTYKGIVDTQILKLQQLSNSSTETNYNIYFNDKIEKLGRQ 586 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + L R++ +L + ++ + + L+ F Sbjct: 587 KQNLEERLQSLLQNFQNQQIETLLPSFQKLKLFN 620 >gi|29477189|gb|AAH50149.1| Apoa4 protein [Mus musculus] Length = 376 Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats. Identities = 19/200 (9%), Positives = 67/200 (33%), Gaps = 5/200 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP-NSDQ 319 D P + +Q+++ L+ ++ L + N ++ L + Sbjct: 144 DQINTQTQEMKLQLTPYIQRMQTTIKENMDNLHTSMMPLATNLKDKFNRNMEELKGHLTP 203 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ---HILEK 376 + + +D+ +L +L + NH + + + + + I + Sbjct: 204 RANELKATIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVSAKIDQL 263 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 Q+++ +++ + + L L Q + ++ ++ + L +++ Sbjct: 264 QKNLAPLMEDVQSKVKGNTEGLQKSLEDLNRQLEQQVEEFRRTVEPMGEMFNKALVQQLE 323 Query: 437 SCHTSVSITTRILQS-FAYK 455 + + ++S ++ Sbjct: 324 QFRQQLGPNSGEVESHLSFL 343 >gi|323447652|gb|EGB03565.1| hypothetical protein AURANDRAFT_72707 [Aureococcus anophagefferens] Length = 1252 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 9/136 (6%), Positives = 31/136 (22%), Gaps = 4/136 (2%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L L R R ++ + L Sbjct: 70 RAQDLRDRDGQRHHRLRQLRQEPHRRRHVPVDEFVRGRRQRVGVLRLRQPDRRGPLLQRR 129 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI----K 421 + Q ++ + + + ++ ++ + + + H+ Sbjct: 130 LGLRAQLHALRRPALRRAHVDGAQLRRASRRLQVHLGPRDLHAPERALAPRRRHVFRFDH 189 Query: 422 KLITRIEFILSHKIKS 437 + R++ L ++ Sbjct: 190 AHLRRLQPALRGLLRR 205 >gi|194217370|ref|XP_001504245.2| PREDICTED: myosin XVIIIA isoform 1 [Equus caballus] Length = 2039 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1671 MLDHLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1730 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1731 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKEK 1790 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1791 QELQEKLQTLQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1850 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1851 NMEKLTEERDQRIAA 1865 >gi|24643294|ref|NP_728267.1| Tao-1, isoform D [Drosophila melanogaster] gi|24643296|ref|NP_728268.1| Tao-1, isoform E [Drosophila melanogaster] gi|320542329|ref|NP_001188672.1| Tao-1, isoform F [Drosophila melanogaster] gi|7293601|gb|AAF48973.1| Tao-1, isoform E [Drosophila melanogaster] gi|22832584|gb|AAN09504.1| Tao-1, isoform D [Drosophila melanogaster] gi|139000842|dbj|BAF51959.1| serine/threonine protein kinase TAO1 alpha [Drosophila melanogaster] gi|257286273|gb|ACV53083.1| LD06119p [Drosophila melanogaster] gi|318069466|gb|ADV37754.1| Tao-1, isoform F [Drosophila melanogaster] Length = 1039 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 58/182 (31%), Gaps = 15/182 (8%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + V + N E + + K +L N Q + R+ + Sbjct: 658 DRKVYDLNRKKEYKANKERWKRELSMDESTPKRQRDLTLQSQKDNLKQHEAQEEQRMLQA 717 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ----IVKQH 387 ++ RK H H Q+ R + +K+Q ++Q ++K H Sbjct: 718 QKQYIELEMRKFKRKRMIMQH----------EHEDQQLRDELGKKEQQLQQAHAMLLKHH 767 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK-SCHTSVSITT 446 + LE +++ ++ + EQ + + K + RI+ L K Sbjct: 768 EKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELVRKHAVELRQQPKSLK 827 Query: 447 RI 448 + Sbjct: 828 QK 829 >gi|124358938|ref|NP_084483.2| protein SFI1 homolog [Mus musculus] gi|123788825|sp|Q3UZY0|SFI1_MOUSE RecName: Full=Protein SFI1 homolog gi|74225816|dbj|BAE21725.1| unnamed protein product [Mus musculus] gi|220939484|emb|CAX15525.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] gi|220941682|emb|CAX15985.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] Length = 1216 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 E I R + R+ R ++ + Sbjct: 699 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 758 Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399 ++ + R K+ L I RQ Q + + R +K++ Sbjct: 759 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 818 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450 L + + +++ R + L +++ + TR+L+ Sbjct: 819 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 871 >gi|71664261|ref|XP_819113.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884400|gb|EAN97262.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1437 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 18/216 (8%), Positives = 59/216 (27%), Gaps = 5/216 (2%) Query: 242 PIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 + +AI D A + +E + S +L + R+ + Sbjct: 1074 VMWTAIAGGIVDAYVDECAAVFKRLYHSTTIYLREREETFKKSSHHLNMSCEERVRRMTR 1133 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L L + + + R ++ H+ ++ + Sbjct: 1134 GMTEREQGLATQLATAQSK-AAAAQRFSDEAYTKLEDVTSRYNEVCARVEHLEEQLAAKK 1192 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRY-IFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 ++ + + +E+ ++ + ++ L + + R+ Sbjct: 1193 RELETERRQWQETVAKLQLERAARRQGEEGRQEQLLRQVEELRAELQNVQARLNSAREEE 1252 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + R ++ + +L++ +N Sbjct: 1253 QGIR-RDADNTKELLQRDIHRLER--ELLEARNSQN 1285 >gi|186686826|ref|YP_001870019.1| hypothetical protein Npun_AF098 [Nostoc punctiforme PCC 73102] gi|186469178|gb|ACC84978.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 1108 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 26/238 (10%), Positives = 70/238 (29%), Gaps = 13/238 (5%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 E+I + + IS + + + A+D + M + + L + Sbjct: 382 ETELIADLSSAADKSYISEVSGWINSIRNEIASDNKLQCTHQGVNMIGTERGKILRFLDD 441 Query: 288 L-----EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLD---RLPRELEHNL 339 + N + L + + L K N D+ + R ++ + Sbjct: 442 YLIPKVDEYRANHLRELSADERTHGDFLQKMYDNRDRIIQQGRQAIEAEFYKIMRDRNLG 501 Query: 340 EIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKI 399 + + F + + + + + +QQ E ++ ++ L K Sbjct: 502 PKFADAFITNVRQLFANASEKFRRESEKVWQPNEINRQQQYEAALQDINQFKNLFGLTKQ 561 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFI-----LSHKIKSCHTSVSITTRILQSF 452 A + E+ + I + +R + + + ++ + L+ Sbjct: 562 AQMEKYCEEALTGLESSFIAIIQHKSRTLSLQVIERILEHLDRMEQRLARFNQKLRQL 619 >gi|312217783|emb|CBX97730.1| similar to DNA repair protein rad50 [Leptosphaeria maculans] Length = 1321 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 21/191 (10%), Positives = 52/191 (27%), Gaps = 9/191 (4%) Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 + E + + L+ + K + L + L+ R L Sbjct: 378 IRGYDYEIADKQVTEFQQILSKMSKDQNKALDRVREETQRELRTAQDELNALNTRKSGLA 437 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 + E I+ R + + + + + E +Q ++ + + Sbjct: 438 QRKESAQTQIVSNDRRILDLQRSMNQISADEGSEAILQDKKHEVEQQLQNALTMASSERY 497 Query: 393 LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT------ 446 E++ + + + E K R+ R + +K + Sbjct: 498 EERQLEASTMVRTLEDHKERLTAELGD-ATKQARESASIDNKREELQNQQHSLATMKKVH 556 Query: 447 --RILQSFAYK 455 R+LQ + Sbjct: 557 NKRLLQLLDPE 567 >gi|30519518|emb|CAD90693.1| A26L protein [Cowpox virus] Length = 1279 Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 52/171 (30%), Gaps = 23/171 (13%) Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLR--EQTKNRIFYLHTH 419 L + + R ++ E ++ + R + ++ R + ++RI L Sbjct: 679 LERQLSECRGNVTEI-NRLQSRISDLERQLNDCRRNNETNAETEREMRRLRDRITNLERQ 737 Query: 420 IKKLITRIEFI--LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKR 477 + E + +++ + R L KR + N T Sbjct: 738 LSDCRRNNESNADMEREMQRLRDRIMDLDRQLNEC------KR------NGNG---TSSE 782 Query: 478 NLATKTRILINFFDGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQGEL 528 + R+ D + + + +K + K +L + + Q L Sbjct: 783 EVN---RLKTRIRDLERSLEICSKDESELYSAYKTELGRAREQISNLQESL 830 >gi|320193200|gb|EFW67840.1| Phage tail length tape-measure protein 1 [Escherichia coli O157:H7 str. EC1212] Length = 1021 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 45/184 (24%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAARDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEARKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|332849677|ref|XP_003315897.1| PREDICTED: dystrobrevin alpha isoform 4 [Pan troglodytes] Length = 452 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 128 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 187 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 188 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 247 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 248 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 280 >gi|308049345|ref|YP_003912911.1| hypothetical protein Fbal_1633 [Ferrimonas balearica DSM 9799] gi|307631535|gb|ADN75837.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799] Length = 1230 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 18/178 (10%), Positives = 55/178 (30%), Gaps = 3/178 (1%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 Q + +L+A+ + + L + + L L+ R + + E E Sbjct: 700 SEYQGFVEDLKAQQMEARMDKEAFWQERLGGIDEQLTQLSGELANRRAQKNEELAECERW 759 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + + + I+ + I + + +K + K + ++K Sbjct: 760 YQAELKERGVDDSQILALKEQIHAIDQKIGRTESMRDKVADYQIWFKGPFSLEQPQLQDK 819 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRILQSFA 453 +++ + + L K L + + + + + ++L + Sbjct: 820 LSVAQREILELDQVLAKLQREHKTLNDELKTSQKAAEQALTHANEQLEQLKQLLAALN 877 >gi|294101698|ref|YP_003553556.1| protease Do [Aminobacterium colombiense DSM 12261] gi|293616678|gb|ADE56832.1| protease Do [Aminobacterium colombiense DSM 12261] Length = 464 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 3/45 (6%) Query: 461 GYTSIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINKAPP 504 G+ + D N +T + +I + DG+ A V+ P Sbjct: 92 GF-IVTD-NGQILTNSHVVEGADKITVTLSDGRTFPAEVLGTDPT 134 >gi|281353819|gb|EFB29403.1| hypothetical protein PANDA_016477 [Ailuropoda melanoleuca] Length = 592 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 41/312 (13%), Positives = 101/312 (32%), Gaps = 26/312 (8%) Query: 203 GRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSI------PIISAIGHETDWTLA 256 D+ + + + FND ++ S + S++ +T + Sbjct: 301 NGPIDVSDLSLCKAFNQNHPETTEFNDSDSGISLNTSPCMASPEHSVESSVYGDTPLGFS 360 Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D + G+ + P + +QS+ ++ + N+ K LP Sbjct: 361 DSEM-EEIDSAPGSVKQNGPKTQPVQSAGDTAQSPSPSPGHSAPARDAQCENTPKKELP- 418 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 +S + + LE + R + + I N+ + + + Sbjct: 419 ----VSPGHRKTPFTKDKHSSRLEAHLTRDELRAKAL-HIPFPVEKIINLPVDDFNEMMS 473 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 ++ + +R I K K+A + + + +N I L + L E +L K + Sbjct: 474 KEQFNEAQLALIRDIRRRGKNKVAAQNCRKRKLEN-IVELEQDLDHLKDEKEKLLKEKGE 532 Query: 437 SCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANA 496 + + + + + L + Y ++ ++D + + + DG Sbjct: 533 NDKS-LHLLKKQLSTL-YLEV----FSMLRDEDGKP-YSPSEYSLQQT-----RDGNVFL 580 Query: 497 IVINKAPPKEQP 508 + +K P ++ Sbjct: 581 VPKSKKPDTKKN 592 >gi|312147274|ref|NP_001185871.1| dystrobrevin alpha isoform 14 [Homo sapiens] gi|194380838|dbj|BAG58572.1| unnamed protein product [Homo sapiens] Length = 452 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 128 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 187 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 188 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 247 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 248 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 280 >gi|167860102|ref|NP_001108102.1| fas-binding factor 1 homolog [Gallus gallus] gi|82081074|sp|Q5ZIB2|FBF1_CHICK RecName: Full=Fas-binding factor 1 homolog; Short=FBF-1 gi|53136404|emb|CAG32531.1| hypothetical protein RCJMB04_28i8 [Gallus gallus] Length = 1132 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 48/165 (29%), Gaps = 7/165 (4%) Query: 293 NNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH 352 ++ + + + + + S L+RL +++ ++ Sbjct: 652 AQLLSQSQDAERARADLVAQHKQRVATLEQQSAQELERLRELQRSSVQEMLKDHEEQLQR 711 Query: 353 II----NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 + I + + ++ ++E+ + + + L M Q Sbjct: 712 LKRLKDQEIDAVTSATSHTRSLNGVIEQMERFSSDLHSLSHKVEATHHTTSQELAMGARQ 771 Query: 409 TKNRIFYLHTHIKKLITRI---EFILSHKIKSCHTSVSITTRILQ 450 ++ L + + + L I +S TR+L+ Sbjct: 772 RDEQLKVLQDRLSQQQRDMEEERSRLQEVIAKMEARLSEQTRLLE 816 >gi|33866708|ref|NP_898267.1| serine protease [Synechococcus sp. WH 8102] gi|33633486|emb|CAE08691.1| possible serine protease [Synechococcus sp. WH 8102] Length = 374 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQ-ANAIVINK 501 I D +T + + + DG+ A VI K Sbjct: 118 VIFDAEGLLLTNAHVVEGADTLQVELTDGRSVEAKVIGK 156 >gi|191169465|ref|ZP_03031200.1| gifsy-1 prophage VmtH [Escherichia coli B7A] gi|190900491|gb|EDV60305.1| gifsy-1 prophage VmtH [Escherichia coli B7A] Length = 1021 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I + +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|71663670|ref|XP_818825.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884097|gb|EAN96974.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 918 Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 51/167 (30%), Gaps = 8/167 (4%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + K + L + + Q + RL EL+ I K + F Sbjct: 291 QLQNEAHDKSKQITVLTSRMQWAQQQAETLKSECSRLVEELKRFQSIHSETKKQLFEAEH 350 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 ++ +++ + K + + + ++ LR + +R + +RI Sbjct: 351 DKSLLQVRCARLEELEVTLRRKSEELIHMEQELLRTTGTLQSCNQETEEAVRRELSSRIA 410 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 L R ++ + ++ R L+ L RG Sbjct: 411 DLQEMRDNAELR-RREKESQLLNAQHQLAELRRQLE-------LARG 449 >gi|332028436|gb|EGI68479.1| Liprin-alpha-2 [Acromyrmex echinatior] Length = 1146 Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 46/161 (28%), Gaps = 6/161 (3%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + + L L L +LE L+ + I Sbjct: 245 RENAAQKEDQEERIATLEKRYLNAQRESTSLHDLNEKLEQELQHKKAQLKLQEEKIAAIQ 304 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE--KKEKIAILHMLREQTKNRIFY 415 + L + E ++ ++Q ++ + +++I L E+ + Sbjct: 305 EKLELAEQKLAQYAKLPEMEEQLKQRMEALTQAQERHGSAEDRIQRLETQLEEKNAEVMR 364 Query: 416 LHTHIKK---LITRIEFILSHKIKSCHTSVS-ITTRILQSF 452 ++ +K TR+ + + + + + + Sbjct: 365 VNQRLKMNEEHNTRLSTTVDKLLSESNERLQVHLKERMHAL 405 >gi|315614584|gb|EFU95227.1| phage tail tape measure protein, lambda family [Escherichia coli 3431] Length = 1021 Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNELQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|293405039|ref|ZP_06649031.1| phage tail length tape-measure protein 1 [Escherichia coli FVEC1412] gi|291427247|gb|EFF00274.1| phage tail length tape-measure protein 1 [Escherichia coli FVEC1412] Length = 1021 Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I + +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|281339395|gb|EFB14979.1| hypothetical protein PANDA_005456 [Ailuropoda melanoleuca] Length = 667 Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 12/136 (8%), Positives = 36/136 (26%), Gaps = 8/136 (5%) Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL-- 374 L + + L H Q+ ++ Sbjct: 362 QVHRLVLQQQESLSPGPCFRGTPFQDQEKYRNLEKQREELADIHKLQHRFQQEQRRWHRS 421 Query: 375 -EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 ++QQ ++ L+ E + + +L R + ++ +++L Sbjct: 422 CDQQQREQEAKASRLQERERECRSQEELLLRNRGELDQQLQEYQQSLERLRE-----GQR 476 Query: 434 KIKSCHTSVSITTRIL 449 ++ + + +L Sbjct: 477 LVERERERMRVQQSLL 492 >gi|121705166|ref|XP_001270846.1| cohesin complex subunit (Psm1), putative [Aspergillus clavatus NRRL 1] gi|119398992|gb|EAW09420.1| cohesin complex subunit (Psm1), putative [Aspergillus clavatus NRRL 1] Length = 1260 Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 17/171 (9%), Positives = 52/171 (30%), Gaps = 3/171 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + R +K K L + L + + + L+ L + + + E Sbjct: 742 LEQRLAYAQEELKALERNLKSKRTELEHAKRQLEDLRPKYTERQEILEELDQTIAQSQES 801 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR--YIFLEKKEKI 399 + + + R+ + + E Q + Q R +K+++ Sbjct: 802 VSRIEDEIYRKFCKRLGYANIREYEIQQGSLQEEAAQKKLEFTTQKSRIENQLSFEKQRL 861 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + + I++L + + +++ + + L+ Sbjct: 862 QATKDRIASLEAQHQRDQSLIEELKEE-QEQIRNQLDEYSAELEVLGEQLE 911 >gi|78222234|ref|YP_383981.1| peptidase S1C, Do [Geobacter metallireducens GS-15] gi|78193489|gb|ABB31256.1| Peptidase S1C, Do [Geobacter metallireducens GS-15] Length = 476 Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKE 506 I D + +T + I + DG + A VI + P + Sbjct: 108 IITDKDGYIVTNNHVVDNAEEIKVKISDGREFKAKVIGRDPKTD 151 >gi|293341673|ref|XP_001076228.2| PREDICTED: centrosomal protein 135-like [Rattus norvegicus] gi|293353094|ref|XP_223341.5| PREDICTED: centrosomal protein 135 [Rattus norvegicus] Length = 1140 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 55/166 (33%), Gaps = 8/166 (4%) Query: 294 NIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHI 353 N ++ I+ + S L+ + + L + L + LE I + + Sbjct: 561 NNLVSCIEKEKERALSDLRRITAEKEALREKLKNIQELNVVGKSELEKTIEHLTYINHQL 620 Query: 354 INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRI 413 N I K LE + ++ H+ +K ++ L ++ EQ + + Sbjct: 621 ENEKYELQSKILIMKETIESLESKSKLQAQKLSHVTGDSSHQKTEMNSLRIVSEQLQRSL 680 Query: 414 FYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 + +E + + L+S +++ T++ Sbjct: 681 DDCQHRLSIKRGELESA--------QEQIKALEQKLESLSHRMTMQ 718 >gi|195539581|gb|AAI67944.1| Unknown (protein for IMAGE:7744353) [Xenopus (Silurana) tropicalis] Length = 1220 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 14/160 (8%), Positives = 47/160 (29%), Gaps = 6/160 (3%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 + +K +++ + + + L + L R ++L + + + + + + Sbjct: 369 NQKLKAELSEVETKYQHLKAEFKQLQQQREEKEQLSLQQQSEINQLHSKLLETERQLGEA 428 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + + E+Q Q+ EK L E+ + + Sbjct: 429 HGRLKEQRQLSAEKLMDKEQQVADLQLKLSRAEEQLKEKTSASTDLQHQLEKIRQQHQEQ 488 Query: 417 HTHIKKLITRIEFILS------HKIKSCHTSVSITTRILQ 450 + +++ + +I + +L+ Sbjct: 489 TNLQQNTTSKLREAQNDLEQVLRQIGDKDQKIQNLEALLE 528 >gi|146320384|ref|YP_001200095.1| DNA polymerase III, alpha subunit [Streptococcus suis 98HAH33] gi|145691190|gb|ABP91695.1| DNA polymerase III, alpha subunit [Streptococcus suis 98HAH33] Length = 822 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + + D +D ++ + + + EEG + G++ + Q+++E L P Sbjct: 698 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 755 Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137 LE R+ + Sbjct: 756 EKFWILLENREHDYAVARILDKYR 779 >gi|146318196|ref|YP_001197908.1| DNA polymerase III DnaE [Streptococcus suis 05ZYH33] gi|145689002|gb|ABP89508.1| DNA polymerase III, alpha subunit [Streptococcus suis 05ZYH33] Length = 1036 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 31/84 (36%), Gaps = 2/84 (2%) Query: 54 YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGS 113 + + D +D ++ + + + EEG + G++ + Q+++E L P Sbjct: 912 FLRVTDTKRTLDVTLFPESYRQYASILEEGGMGYITGRVQ--ERDGQLQLVLEKLEPVSL 969 Query: 114 GTLLTALEKRKKKLLEEGLFSDQH 137 + LE R+ + Sbjct: 970 EKVWILLENREHDYAVARILDKYR 993 >gi|119571563|gb|EAW51178.1| hCG27198, isoform CRA_d [Homo sapiens] Length = 1581 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1213 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1272 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1273 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1332 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1333 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1392 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1393 NMEKLTEERDQRIAA 1407 >gi|56159917|gb|AAV80770.1| SP-A receptor subunit SP-R210 alphaS [Homo sapiens] Length = 1581 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1213 MLDHLKNSAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1272 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1273 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQINDLQAQLEEANKEK 1332 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1333 QELQEKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1392 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1393 NMEKLTEERDQRIAA 1407 >gi|186685788|ref|YP_001868984.1| chromosome segregation protein SMC [Nostoc punctiforme PCC 73102] gi|186468240|gb|ACC84041.1| chromosome segregation protein SMC [Nostoc punctiforme PCC 73102] Length = 1223 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 21/212 (9%), Positives = 61/212 (28%), Gaps = 36/212 (16%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + I ++ ++ + + LK L N Q L + E E Sbjct: 839 SQTPSEWQQIQATIKIQEQHLQQRETALREAEQRLKNLENQQQRLQEKIQEAETRITEYE 898 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH--------------IEQ 382 + F+ I + + L +++ +Q Sbjct: 899 TQQISCKDAIHHVFSQITTINEQITQTRLSLAQMEQNLGEEKQKRDATELEVRSHLLRQQ 958 Query: 383 IVKQHLRYIFLEKKEKIAILHMLREQTKN----------------RIFYLHTHIKKLITR 426 ++ + + ++++ L L+ Q ++ + L ++ L R Sbjct: 959 QLQWEIEKLKETQEKRREELIALQSQLRDMGAELPNPLPEVPDKVDLEELQKELRSLTKR 1018 Query: 427 IE------FILSHKIKSCHTSVSITTRILQSF 452 ++ + + + + T+ L++ Sbjct: 1019 LQAMEPVNMLALEEYERTQNRLQELTQKLETL 1050 >gi|330960231|gb|EGH60491.1| chromosome segregation protein SMC [Pseudomonas syringae pv. maculicola str. ES4326] Length = 1162 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L Q + LR + E+ ++ I + Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330 >gi|322802859|gb|EFZ23051.1| hypothetical protein SINV_80610 [Solenopsis invicta] Length = 7174 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 19/186 (10%), Positives = 48/186 (25%), Gaps = 12/186 (6%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR------- 330 E + + + + + N K LP + R DR Sbjct: 5933 WEEYLTHVQDFLSSGMPGDYNGLSEHRNLCEVHRKLLPEQQNLILTVRQGEDRDRSVAEQ 5992 Query: 331 ---LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L L I+ R + I K + + + ++Q + Sbjct: 5993 FNALTNLHNETLARILERHAAVRDRISAWDKYRLDQGKLLTWLKEVERERQRMHLQFIHL 6052 Query: 388 LRY--IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 R I + + + + Q ++ + + + + + ++ Sbjct: 6053 RRLDKILQRIQTLLDKMPVGEAQIESLQEQQEYLLTNCDEALAVSIRMEHAANVQRIANM 6112 Query: 446 TRILQS 451 L++ Sbjct: 6113 RAGLET 6118 >gi|320659897|gb|EFX27445.1| putative tail component of prophage CP-933K [Escherichia coli O55:H7 str. USDA 5905] Length = 1021 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|319411599|emb|CBQ73643.1| probable SMC1-chromosome segregation protein [Sporisorium reilianum] Length = 1243 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 17/218 (7%), Positives = 58/218 (26%), Gaps = 26/218 (11%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 + +D E + + +++ + + + + K + L + Sbjct: 715 FVSDDEMVAKITGLEADLRSAQDELAAVNTRLTGIRDELKNIDKQTKE----MQPKLRTA 770 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF---------NHIINRIKSDFLIHNIQK 368 L + ++ L + + I R + ++ + Sbjct: 771 KTELEQLQRKMSTLEEVVNREEDRIFAAFCRRIGVDNIREYEERQVRLMERQSDARLQFE 830 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI- 427 ++ L Q + E+ + + ++ IA + + + + ++ I Sbjct: 831 SQLARLNHQANFERQQIESTQERLETLRQAIAREGQKLQSWQAQKKGKQEQLDGMLEEIQ 890 Query: 428 ------------EFILSHKIKSCHTSVSITTRILQSFA 453 ++ + R+L S + Sbjct: 891 ELQAQLTQLQTQNEAKKATLEEKRVELQKAARLLDSLS 928 >gi|291281755|ref|YP_003498573.1| putative tail component of prophage CP-933K [Escherichia coli O55:H7 str. CB9615] gi|290761628|gb|ADD55589.1| Putative tail component of prophage CP-933K [Escherichia coli O55:H7 str. CB9615] Length = 1021 Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|170036424|ref|XP_001846064.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167879036|gb|EDS42419.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 1076 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 14/177 (7%), Positives = 53/177 (29%), Gaps = 6/177 (3%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + Q ++ ++ + + + + R+ + E + Sbjct: 429 DIHQKNIEEIKEFYQVKLSEMKADYEEENEKEYRIYR--ETLQEEFDRRVKEVTDEHKST 486 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + + + +K++ + + K + ++ + R ++ Sbjct: 487 MATLQKNHDEIVEELERDLKTEEELLKKEHATNLTEMKIKLAHELEVERQR----MRETG 542 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 L+ K + + +K+ TR++ + ++ + L S +Y+ Sbjct: 543 EDRLYEKIRCEKRLLEDKYKCLKEKYTRLKTDVRISLERRKKRREQQQQSLLSNSYE 599 >gi|91784127|ref|YP_559333.1| chromosome segregation protein SMC [Burkholderia xenovorans LB400] gi|91688081|gb|ABE31281.1| Chromosome segregation protein SMC [Burkholderia xenovorans LB400] Length = 1198 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 52/385 (13%), Positives = 110/385 (28%), Gaps = 24/385 (6%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139 PE G + G + T Q+ +G +E +++ + L +D+ K Sbjct: 655 PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 711 Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL---- 195 V + + L++ + Q E + + I Sbjct: 712 AAIRAEAAHTQAAQALTDVRQQAERATQRVHALQMDVLK-LTQAHERYTQRSTQIREELA 770 Query: 196 -QLNTLKEGRTCPRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDW 253 ++E R R G + +L F D + + + + D Sbjct: 771 EITAQIEEQRAMRAESEANFERHDGELAELQARFEDHQLAFEALDEELTAARGQARDLDR 830 Query: 254 TLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +AA A E + +LE + + L L Sbjct: 831 AATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDAL 890 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 ++ L +R LD L +L E + + ++ +++ Sbjct: 891 DIRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAA 945 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRI 427 + +Q IEQ+ + L+ K + + RI T + + + Sbjct: 946 RLNG-EQFIEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDEL 1004 Query: 428 EFILSHK--IKSCHTSVSITTRILQ 450 + K + + T ++ L+ Sbjct: 1005 KAATERKSFLDAQSTDLNSAIETLE 1029 >gi|73964395|ref|XP_537539.2| PREDICTED: similar to DVL-binding protein DAPLE [Canis familiaris] Length = 2361 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 19/244 (7%), Positives = 64/244 (26%), Gaps = 15/244 (6%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D D + + + Q ++ + + + + Sbjct: 897 CDNGCDDLYLLMAPSLKTECELLRQNQEEGKHVHNSFKHPVETPVTAAHQGREPWGPSHK 956 Query: 316 NSDQTLSCSRYRLDRLPRELE--HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHI 373 + L + R L R + ++ + +H + L Q Sbjct: 957 EATMELLRVKDRAIELERNNAALQAEKQLLKEQLQHLETQNVAFSTQILTLQKQSAFLQE 1016 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSH 433 + Q + + + L + + H ++++ ++ Sbjct: 1017 HNTTLQTQTAKLQVENSTLSSQSAALTAQYTLLQNQQTAKESEHENLQRQQEQLTAAYEA 1076 Query: 434 KIKSCHTSVSIT--------TRILQSFAYKNTLKRGYTS----IQDTNNNFITQKRNLAT 481 ++ ++ +++ + TL R ++D ++ + +K L Sbjct: 1077 LLQDHEH-LAALHERQSTEYEALIRQHSCLKTLHRNLELEHRELRDRHDEVLKRKAELDE 1135 Query: 482 KTRI 485 ++ Sbjct: 1136 LEKV 1139 >gi|301768224|ref|XP_002919530.1| PREDICTED: centrosomal protein of 164 kDa-like [Ailuropoda melanoleuca] Length = 1453 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 45/138 (32%), Gaps = 3/138 (2%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + ++ +L +L E + + ++ +K ++ Q Sbjct: 600 RDRRRLLESKQEKMQQLWEKLCQEEEEETLQLHWQKEKSLSSLKEQLRKATEEEETQMRE 659 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 E+ + + Q+ Q ++ A ++ + + L + +E Sbjct: 660 EESRRLAQLRAQVQSSAEADEGRIRAEQEASLQRLREELESLQ---RAERASLEQRSRQT 716 Query: 435 IKSCHTSVSITTRILQSF 452 ++ + + + Q+ Sbjct: 717 LEQLKEELEASEKREQAL 734 >gi|300899641|ref|ZP_07117872.1| phage tail tape measure protein, lambda family [Escherichia coli MS 198-1] gi|300356766|gb|EFJ72636.1| phage tail tape measure protein, lambda family [Escherichia coli MS 198-1] Length = 1021 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 47/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I + +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINSMQYADQAVRDAAIQREN-ERYEKALASGKKKTREPRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|281346172|gb|EFB21756.1| hypothetical protein PANDA_008168 [Ailuropoda melanoleuca] Length = 1471 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 13/138 (9%), Positives = 45/138 (32%), Gaps = 3/138 (2%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + L + ++ +L +L E + + ++ +K ++ Q Sbjct: 600 RDRRRLLESKQEKMQQLWEKLCQEEEEETLQLHWQKEKSLSSLKEQLRKATEEEETQMRE 659 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 E+ + + Q+ Q ++ A ++ + + L + +E Sbjct: 660 EESRRLAQLRAQVQSSAEADEGRIRAEQEASLQRLREELESLQ---RAERASLEQRSRQT 716 Query: 435 IKSCHTSVSITTRILQSF 452 ++ + + + Q+ Sbjct: 717 LEQLKEELEASEKREQAL 734 >gi|146084523|ref|XP_001465030.1| kinesin [Leishmania infantum JPCM5] Length = 1091 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 18/184 (9%), Positives = 62/184 (33%), Gaps = 8/184 (4%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + + + ++ A L ++ +T + L RL Sbjct: 731 TLLLCACNGILTANSEAAAILQKMLSEREDDLRDTKRLHEEELATQA---ERFCERLKEA 787 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-----QHILEKQQHIEQIVKQ 386 E + ++ R + R++ I+ +++ R + + ++ Q ++ ++ Sbjct: 788 LDEGAVQQQQLLDRHRDAVAQLEGRLQRSHEINEMERKRNDKEKEELRQRVQLAQERMRN 847 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + + ++ R ++ + + L ++ + R+ L+ +S + + Sbjct: 848 EYQQEIERLRARVEGDIGDRHKSGDAVRQLQEMHEREMERLRDELNLLKRSKDSDCARLH 907 Query: 447 RILQ 450 L+ Sbjct: 908 NQLE 911 >gi|48256961|gb|AAT41663.1| Ccd1BbetaL [Mus musculus] Length = 477 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 77/246 (31%), Gaps = 29/246 (11%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLIN 287 ++ +I +A + II + G E D + + + +E L + Sbjct: 23 SESIITQAEEKADFVIIPSEGIENRTDEPDSPSSRDWRPGSRGTYLEATWEEQLLEQQEH 82 Query: 288 LEARLNNIIIRLI------------KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 LE + + + + +L + N ++ L R RLD+ E Sbjct: 83 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVNPEEQLIIIRSRLDQ-SVEE 141 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 +L+ + + + ++ D L + + +L+ +Q + + Sbjct: 142 NQDLKKELLKCKQEARNLQGI--KDALQQRLTQQDTSVLQLKQELLRANMDKD------- 192 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYK 455 LH + ++ + + + + + + R L +Y+ Sbjct: 193 -----ELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKLSDASYQ 246 Query: 456 NT-LKR 460 L+R Sbjct: 247 QVDLER 252 >gi|29840172|ref|NP_829278.1| single-strand DNA-binding protein [Chlamydophila caviae GPIC] gi|37999369|sp|Q823K0|SSB_CHLCV RecName: Full=Single-stranded DNA-binding protein; Short=SSB; AltName: Full=Helix-destabilizing protein gi|29834520|gb|AAP05156.1| single-strand binding protein [Chlamydophila caviae GPIC] Length = 161 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 7/64 (10%) Query: 58 KDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITT--F-----PGSSKYQIIIESLIP 110 KD +W +K+ ++G +V G I+ + S I ++++ Sbjct: 39 KDETVWCKCNVWHNRYDKMLPYLKKGSGVIVAGDISVESYMSKDGTPQSSLVISVDTIKF 98 Query: 111 SGSG 114 S G Sbjct: 99 SPFG 102 >gi|15830091|ref|NP_308864.1| tail length tape measure protein precursor [Escherichia coli O157:H7 str. Sakai] gi|168750304|ref|ZP_02775326.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4113] gi|168757100|ref|ZP_02782107.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4401] gi|168763401|ref|ZP_02788408.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4501] gi|168767257|ref|ZP_02792264.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4486] gi|168776443|ref|ZP_02801450.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4196] gi|168779300|ref|ZP_02804307.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4076] gi|168786971|ref|ZP_02811978.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC869] gi|168800756|ref|ZP_02825763.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC508] gi|195936798|ref|ZP_03082180.1| putative tail length tape measure protein precursor [Escherichia coli O157:H7 str. EC4024] gi|208807364|ref|ZP_03249701.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4206] gi|208816116|ref|ZP_03257295.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4045] gi|208822146|ref|ZP_03262465.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4042] gi|209396645|ref|YP_002269430.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4115] gi|217325087|ref|ZP_03441171.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. TW14588] gi|254791954|ref|YP_003076791.1| putative tail component of prophage CP-933K [Escherichia coli O157:H7 str. TW14359] gi|261225406|ref|ZP_05939687.1| putative tail component of prophage CP-933K [Escherichia coli O157:H7 str. FRIK2000] gi|261258626|ref|ZP_05951159.1| putative tail component of prophage CP-933K [Escherichia coli O157:H7 str. FRIK966] gi|13360296|dbj|BAB34260.1| putative tail length tape measure protein precursor [Escherichia coli O157:H7 str. Sakai] gi|187768190|gb|EDU32034.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4196] gi|188015524|gb|EDU53646.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4113] gi|189002806|gb|EDU71792.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4076] gi|189355824|gb|EDU74243.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4401] gi|189363480|gb|EDU81899.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4486] gi|189366470|gb|EDU84886.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC4501] gi|189373011|gb|EDU91427.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC869] gi|189376985|gb|EDU95401.1| gifsy-1 prophage VmtH [Escherichia coli O157:H7 str. EC508] gi|208727165|gb|EDZ76766.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4206] gi|208732764|gb|EDZ81452.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4045] gi|208737631|gb|EDZ85314.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4042] gi|209158045|gb|ACI35478.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. EC4115] gi|217321308|gb|EEC29732.1| putative prophage tail length tape measure protein [Escherichia coli O157:H7 str. TW14588] gi|254591354|gb|ACT70715.1| putative tail component of prophage CP-933K [Escherichia coli O157:H7 str. TW14359] gi|326345675|gb|EGD69414.1| Phage tail length tape-measure protein 1 [Escherichia coli O157:H7 str. 1125] gi|326347965|gb|EGD71678.1| Phage tail length tape-measure protein 1 [Escherichia coli O157:H7 str. 1044] Length = 1021 Score = 37.0 bits (84), Expect = 7.6, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEARKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|332843794|ref|XP_523122.3| PREDICTED: golgin subfamily A member 6A [Pan troglodytes] Length = 650 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 13/145 (8%), Positives = 45/145 (31%), Gaps = 5/145 (3%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 L K L + L ++ ++ ++ + + + + Sbjct: 297 EQLQDEAKHLRQEVEGLEEKLQS--QVENNQALSVLSKEQKQRLQEQEEKLQEQEEMIRE 354 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + R+ ++ + +E++ +Q+ R +++ + + + R+ ++K Sbjct: 355 QEEMLREQEAQRVRELERLCEQNERLRE--QQKTLQEQGERLRKQEQRLHTQEERLQKQE 412 Query: 425 TRIEFILSHKIKSCHTSVSITTRIL 449 R+ K + L Sbjct: 413 KRLWDQEERLWK-KEERLQKQEERL 436 >gi|307182327|gb|EFN69609.1| STE20-like serine/threonine-protein kinase [Camponotus floridanus] Length = 1661 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 18/185 (9%), Positives = 52/185 (28%), Gaps = 11/185 (5%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP--NSDQTLSCSRYRLDRLPR 333 + + + +++ ++ K + ++ R L+R Sbjct: 1141 ENGKVYDDQIFRKQELRELKMLQKMEQKQFQDLAQKAQFNKDQQEKRFEQERQLLERNAE 1200 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 L ++ + + + + ++ ++Q ++ + I L Sbjct: 1201 ADLEALARQQRQQIERAEAQQEVDLRLASKKIRSEQERELKQFREGLKQELRLLKQEIDL 1260 Query: 394 EKKEKIAILHMLR---------EQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSI 444 K+K +R E+ K + L+ + + R+ KI Sbjct: 1261 MPKDKRKSAFKIRKEKLEAEHEEREKLFLEKLNESHEISLRRLSDSHREKIALMERQFLQ 1320 Query: 445 TTRIL 449 + L Sbjct: 1321 QKQQL 1325 >gi|291401043|ref|XP_002716906.1| PREDICTED: pericentrin [Oryctolagus cuniculus] Length = 2950 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 4/183 (2%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 E + + +Q +I L + L++ L + Q L R Sbjct: 2545 ERLLQSLDDVQKEVIQLRSVLDSKENDLQAVLQQLERERTRERALQSQLEEEQLQHLQRE 2604 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 + + E+ + + + H + ++ + + E ++ Q + Sbjct: 2605 AQSSKSLEELRLSLEKQSAQHSRLCVALKHEQTAKDNLQKELQIEYSRCEALLAQERGQL 2664 Query: 392 FLEKKEKIAILHMLREQTK----NRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 +K A + E ++ R+ + T+ L K+K VS Sbjct: 2665 AELQKSLDAERNRTLELSEALQHERLLTEQLSRRPQETQAHHALLRKLKEEKCRVSELQA 2724 Query: 448 ILQ 450 +L Sbjct: 2725 LLD 2727 >gi|229515598|ref|ZP_04405057.1| GGDEF family protein [Vibrio cholerae TMA 21] gi|229347367|gb|EEO12327.1| GGDEF family protein [Vibrio cholerae TMA 21] Length = 372 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 76 HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + E++EK A L + ++L+ + L K+ Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188 Query: 436 KSCHTSVSITTRILQSFA 453 + R L++ + Sbjct: 189 IERTQQLYQVNRQLEALS 206 >gi|194381232|dbj|BAG64184.1| unnamed protein product [Homo sapiens] Length = 1086 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 757 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 812 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 813 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 872 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 873 LETVRQEQHKRLEDLRRRHREQERKLQDL 901 >gi|48256955|gb|AAT41660.1| Ccd1Aalpha1L [Mus musculus] Length = 710 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338 LEA ++ ++ + K + L D R + Sbjct: 297 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 356 Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 + + + + + + + QQ + Q L+ Sbjct: 357 PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 414 Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + + + ++ + + + + + + R L Sbjct: 415 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 473 Query: 450 QSFAYKNT-LKR 460 +Y+ L+R Sbjct: 474 SDASYQQVDLER 485 >gi|15800511|ref|NP_286523.1| putative tail component of prophage CP-933K [Escherichia coli O157:H7 EDL933] gi|12513743|gb|AAG55131.1|AE005257_10 putative tail component of prophage CP-933K [Escherichia coli O157:H7 str. EDL933] Length = 1021 Score = 37.0 bits (84), Expect = 7.7, Method: Composition-based stats. Identities = 19/184 (10%), Positives = 46/184 (25%), Gaps = 2/184 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + + + + L A +++ + R + L Sbjct: 502 SRAKRLPWTASSSQVEYDQQRLNDLQEKKRQKDLQDAKEQAERNYQEQQKRRNAENAALN 561 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E R R I +D + + R++ ++ + K+ E Sbjct: 562 RMNETEAARHQREIARINAMQYADQAVRDAAIQREN-ERYEKALASGKKKTRETRNDEAT 620 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + Q + +I R+ + +S + K+ Sbjct: 621 RLLLQYSQQQAQVEGQIAAARQSAGIATERMTEARKQLLA-LQQRISDLDGKKLTADEKS 679 Query: 457 TLKR 460 L R Sbjct: 680 VLAR 683 >gi|332225630|ref|XP_003261986.1| PREDICTED: dystrobrevin alpha isoform 4 [Nomascus leucogenys] Length = 395 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + L + + L S + + + + F I ++ Sbjct: 65 YVNQLDHGARMLESSNRLDEEHRLIARYAARLAAESSSSQPTQQRSAPDISFTIDANKQQ 124 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRI 427 RQ I E + +I+++ R ++ ++ + L +L R+ Sbjct: 125 RQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRM 184 Query: 428 EFILSHKIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + + ++L++ + +T+ R Sbjct: 185 SALQESR-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 223 >gi|323976123|gb|EGB71216.1| exonuclease SbcC [Escherichia coli TW10509] Length = 1047 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 38/153 (24%), Gaps = 12/153 (7%) Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNI 366 L D+ + R L + L + ++ + + Sbjct: 247 NWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHTAAL 306 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIK 421 RQ I E ++ + K+ + Q +R + + Sbjct: 307 AHTRQQIEEVNTRLQSTMALRESIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQWNNELA 366 Query: 422 KLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + S + ++ ++ + L + Sbjct: 367 GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|313901968|ref|ZP_07835384.1| chromosome segregation protein SMC [Thermaerobacter subterraneus DSM 13965] gi|313467757|gb|EFR63255.1| chromosome segregation protein SMC [Thermaerobacter subterraneus DSM 13965] Length = 1242 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 6/89 (6%), Positives = 29/89 (32%), Gaps = 2/89 (2%) Query: 364 HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL 423 H + + + E + ++ + + R L ++ + ++ + + + Sbjct: 186 HRLLRLGDILRELEDRLD-GLTEQARRAHLYRQWRDELVDLEARMVTAQAVQAQRRLADH 244 Query: 424 ITRIEFILSHKIKSCHTSVSITTRILQSF 452 R+E + ++ + + + Sbjct: 245 ARRLE-AVRQQVAAARRRLEEAGAARDAL 272 >gi|158335947|ref|YP_001517121.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017] gi|158306188|gb|ABW27805.1| chromosome segregation protein SMC [Acaryochloris marina MBIC11017] Length = 1220 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 20/193 (10%), Positives = 65/193 (33%), Gaps = 9/193 (4%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 K + + + L+ + Q L + +E + ++ + + + + + Sbjct: 930 KQERDRVEKHLQERTAAHQQLLWQIQKTQDKQQEHQDLIQQLQTQLQAKATELPDPLPEI 989 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK---------EKIAILHMLREQTKN 411 +++ R+ + + Q+ ++ + ++ I ++ EK+ L R + Sbjct: 990 PEDLTLEQLREELQKLQKRLQAMEPVNMLAIEEYERTQERLVELTEKLTTLESERTELLL 1049 Query: 412 RIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNN 471 RI T + + +S +S LQ ++ + G + Sbjct: 1050 RIENFRTLRYQSFREAYDAIDVNFQSIFAELSDGDGHLQLDNPEDPFQGGLNLVAHPKGK 1109 Query: 472 FITQKRNLATKTR 484 + + +++ + Sbjct: 1110 PVQRLASMSGGEK 1122 >gi|332833192|ref|XP_001168941.2| PREDICTED: hamartin isoform 1 [Pan troglodytes] Length = 1113 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 V + + N + ++ + +I L + N Q L + Sbjct: 698 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 757 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 EL L+ + + + ++Q+ + + + + ++ + +L + Sbjct: 758 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 817 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 818 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 872 >gi|332755841|gb|EGJ86198.1| phage tail tape measure protein, lambda family [Shigella flexneri K-671] Length = 531 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 7/177 (3%) Query: 285 LINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIF 344 N ++ RL + T L A +++ + R + L E Sbjct: 28 WTNASTQVEYDQQRLNDLRRKTPEGLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAA 87 Query: 345 RKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHM 404 R R I +D + + R++ + E+ +K++ R ++ ++ + + Sbjct: 88 RHQREIARINAMQYADQAVRDAAIQREN-----ERYEKAIKKNTRATRNDEATRLLLQYS 142 Query: 405 LRE-QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 ++ Q + +I R+ + +S + K+ L R Sbjct: 143 QQQAQVEGQIAAARQSAGIATERMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 198 >gi|291383894|ref|XP_002708440.1| PREDICTED: DIX domain containing 1 [Oryctolagus cuniculus] Length = 679 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 9/125 (7%), Positives = 35/125 (28%), Gaps = 6/125 (4%) Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 ++ + + + + + + QQ + Q L+ + Sbjct: 357 IQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQQRLAQQDTSVLQLKQELLRAN 414 Query: 399 IAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + + + ++ + + + + ++ + R L Y+ Sbjct: 415 MDKDELHNQNVDLQRKLDERNRLLGEYQKELGQK-DRLLQQHQAKLEEALRKLSDANYQQ 473 Query: 457 T-LKR 460 L+R Sbjct: 474 VDLER 478 >gi|167521079|ref|XP_001744878.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776492|gb|EDQ90111.1| predicted protein [Monosiga brevicollis MX1] Length = 600 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 7/126 (5%) Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + +R L RL + + L+ + L +++ RQH ++ QQ ++ Sbjct: 9 ARTRDDLQRLQQTWKTGLQDAQRETQEARDQARQ------LQVALEQERQHGIKLQQQLD 62 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 Q R + E L L ++ + + + +E L ++ + Sbjct: 63 QAQVSATRQQSRARIELEQQLVDLEQRCR-DLTLDRDVWRDKAQSLERELHAQLAQRASR 121 Query: 442 VSITTR 447 Sbjct: 122 RDAAEA 127 >gi|118103307|ref|XP_418249.2| PREDICTED: hypothetical protein [Gallus gallus] Length = 1012 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 19/156 (12%), Positives = 48/156 (30%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 + +LL+ L + +S ++ + + + R + + +F Sbjct: 640 QRIQTLLQLLFSLQAVISQQDSYIEVQRATMVDREKQYRLQSTRGNVLLEQEKQRNFEKQ 699 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 + L+ Q +EQ + R + E RE+ ++ +K + Sbjct: 700 REELMNVQKLQSQLKLEQQRWERERSQQQRELEISEAHLQRREEETRQLKDKLIQDRKEL 759 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R H ++ + + + LK+ Sbjct: 760 ERQREAYQHDLERLREAQRAVEKERERLDQLRKLKK 795 >gi|118404680|ref|NP_001072623.1| serine/threonine kinase 10 [Xenopus (Silurana) tropicalis] gi|114107626|gb|AAI23020.1| serine/threonine kinase 10 [Xenopus (Silurana) tropicalis] Length = 951 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 17/190 (8%), Positives = 54/190 (28%), Gaps = 10/190 (5%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 + E A+ ++ + E + +L K + K + Sbjct: 603 HQKQQIERMEQEHALRRRDEARRIRTEQERDHVKFLEQLKLRKKELKAQVEKLPRQQRR- 661 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + ++D ++ + + ++ + I + K R+ + +KQQ + Sbjct: 662 -DAMKVQMDDFAQKKHIEEQQFLNKQKEDLTLALRVIVLENRKEIYNKEREFLNKKQQLL 720 Query: 381 EQIVKQHLRYIFLEKKEKIAI--------LHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 +E+ + + R + + +++ R+ L Sbjct: 721 RDREAVIWDLEERHLQERHQLVKQQLKDQYFLQRHELLRKHEKEQEQMQRYNQRMMEQLK 780 Query: 433 HKIKSCHTSV 442 + + + Sbjct: 781 LRQQQERARL 790 >gi|91079989|ref|XP_970719.1| PREDICTED: similar to AGAP004877-PA [Tribolium castaneum] Length = 877 Score = 37.0 bits (84), Expect = 7.8, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 55/186 (29%), Gaps = 3/186 (1%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 E + +NL + + + T++ L K DQ ++ D Sbjct: 375 LERINIDLKTRLEETVNLYEQTQRDLRNKQQELQRTVHELDKTREQKDQLARENKKLGDD 434 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN---RQHILEKQQHIEQIVKQH 387 L E+ + D L ++ R+ + Q + Q Sbjct: 435 LTDARNTISELTRRLHELELELRRLENERDELTAAYKEAEAGRKAEELRSQRLSSEFAQF 494 Query: 388 LRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTR 447 +EK + +R+ T I L+ + + TR++ + K ++ Sbjct: 495 RHEAEKRLQEKDEEIEAIRKATSIEIEQLNARVVEAETRLKTEVQRIKKKLQIQITELEM 554 Query: 448 ILQSFA 453 L + Sbjct: 555 SLDAAN 560 >gi|332025287|gb|EGI65458.1| Nucleoprotein TPR [Acromyrmex echinatior] Length = 2277 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 15/158 (9%), Positives = 46/158 (29%), Gaps = 2/158 (1%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + + + L + + + + + + + I+ K Sbjct: 717 RLRAQLDSANERFSLLQGNVASYKSQIKALEEKCTNYNITISKHEQSIMILKDETLAAQT 776 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHI--EQIVKQHLRYIFLEKKEKIAILHMLREQTKNR 412 +++ + N+++ RQ + + + + E+ V Q R K + + E+ + Sbjct: 777 RLSRAEVQLENLRQERQLLRDTEGRLLKEREVYQRERQTQALLKADMESIKASLERVQAE 836 Query: 413 IFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 R L +++ L+ Sbjct: 837 GQLRAEQRFDDANRECAALRRRLQEEQDRFRELAGHLE 874 >gi|224083219|ref|XP_002190041.1| PREDICTED: DIX domain containing 1 [Taeniopygia guttata] Length = 686 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 17/187 (9%), Positives = 48/187 (25%), Gaps = 14/187 (7%) Query: 287 NLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN-------- 338 LE ++ + + K + L D E + Sbjct: 278 YLENSWEEQLLEQQDHLEKEMEEAKKMISGLQALLLNGSLPEDEQEGSFELSERGACPEE 337 Query: 339 ----LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + + + + + L+++ + L+ L Sbjct: 338 QLIIIRSRLDQSVEENQDLKKELLKYKQEARNLQGIKDALQQRLLQQDAAVLQLKQELLR 397 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAY 454 LH + ++ + + + + ++ T + R L +Y Sbjct: 398 ANMDKEELHNQNVDLQRKVEERNRLLAEYKKELCQK-DRHLQQHQTKLDEMLRQLSEASY 456 Query: 455 KNT-LKR 460 + L+R Sbjct: 457 QQVDLER 463 >gi|168044246|ref|XP_001774593.1| predicted protein [Physcomitrella patens subsp. patens] gi|162674148|gb|EDQ60661.1| predicted protein [Physcomitrella patens subsp. patens] Length = 857 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 25/250 (10%), Positives = 70/250 (28%), Gaps = 14/250 (5%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP---N 316 + + E + ++ + I L + I + + ++ Sbjct: 68 SHCQCSNSKAMIERKLWQPKYCKQWSIKLINLMEGIFQDVDRVTKKLFLEWIERPNKNLQ 127 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEI-----IIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 + + L + +L + + LE + + + D + Sbjct: 128 ATELLREFERQYSQLSKVEKLTLEANKVDLFLQAADGELQGKLELLLEDKEEDEGLTTKW 187 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 +E + ++ ++K + + T + K + Sbjct: 188 KNVEDAVGLLTKRERRKDRSNIQKIVQAPKAPVRTTPPTMPTVQPSTSLSKKADMGMEEI 247 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINFF 490 ++ ++ + KN K+GY I + + + +L + NF Sbjct: 248 IRGMRDLQIKLTRLEENTSTNNSKNVSKQGYGIICWKDGKIALKNREDL-----LQTNFG 302 Query: 491 DGQANAIVIN 500 G+ A+V + Sbjct: 303 KGRMRALVQD 312 >gi|148693805|gb|EDL25752.1| DIX domain containing 1, isoform CRA_a [Mus musculus] Length = 437 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338 LEA ++ ++ + K + L D R + Sbjct: 26 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 85 Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 + + + + + + + QQ + Q L+ Sbjct: 86 PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 143 Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + + + ++ + + + + + + R L Sbjct: 144 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 202 Query: 450 QSFAYKNT-LKR 460 +Y+ L+R Sbjct: 203 SDASYQQVDLER 214 >gi|110640335|ref|YP_668063.1| hypothetical protein ECP_0124 [Escherichia coli 536] gi|191174243|ref|ZP_03035753.1| conserved hypothetical protein [Escherichia coli F11] gi|300984659|ref|ZP_07177047.1| hypothetical protein HMPREF9553_02744 [Escherichia coli MS 200-1] gi|110341927|gb|ABG68164.1| hypothetical integral membrane protein YacH [Escherichia coli 536] gi|190905476|gb|EDV65105.1| conserved hypothetical protein [Escherichia coli F11] gi|300306637|gb|EFJ61157.1| hypothetical protein HMPREF9553_02744 [Escherichia coli MS 200-1] gi|324012225|gb|EGB81444.1| hypothetical protein HMPREF9533_03740 [Escherichia coli MS 60-1] Length = 585 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 13/179 (7%), Positives = 43/179 (24%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA A + + + N + + L K Sbjct: 407 AASQFQQRTHTAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQR 466 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + R + + R + + + +Q N Q+ ++ Sbjct: 467 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 526 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 ++I + +++ + + + + R+ + +++ Sbjct: 527 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 585 >gi|124513454|ref|XP_001350083.1| reticulocyte binding protein 2 homolog A [Plasmodium falciparum 3D7] gi|74842797|sp|Q8IDX6|RBP2A_PLAF7 RecName: Full=Reticulocyte-binding protein 2 homolog a gi|23615500|emb|CAD52492.1| reticulocyte binding protein 2 homolog A [Plasmodium falciparum 3D7] gi|33413772|gb|AAN39443.1| normocyte binding protein 2a [Plasmodium falciparum] Length = 3130 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 47/129 (36%), Gaps = 8/129 (6%) Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 +RL RE + L+ + + + K + L Q+ Q E ++ ++ ++ Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762 Query: 386 QHLRYIFL-------EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + + +++E++ L+ Q + R+ ++ R+E ++ Sbjct: 2763 REKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQL-QK 2821 Query: 439 HTSVSITTR 447 + + Sbjct: 2822 EEELKRQEQ 2830 >gi|13345187|gb|AAK19244.1|AF312916_1 reticulocyte binding protein 2 homolog A [Plasmodium falciparum] Length = 3130 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 47/129 (36%), Gaps = 8/129 (6%) Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 +RL RE + L+ + + + K + L Q+ Q E ++ ++ ++ Sbjct: 2703 QEKERLEREKQEQLKKEEELRKKEQERQEQQQKEEALKRQEQERLQKEEELKRQEQERLE 2762 Query: 386 QHLRYIFL-------EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 + + +++E++ L+ Q + R+ ++ R+E ++ Sbjct: 2763 REKQEQLQKEEELKRQEQERLQKEEALKRQEQERLQKEEELKRQEQERLEREKQEQL-QK 2821 Query: 439 HTSVSITTR 447 + + Sbjct: 2822 EEELKRQEQ 2830 >gi|46559410|ref|NP_835219.1| dixin [Mus musculus] gi|81873447|sp|Q80Y83|DIXC1_MOUSE RecName: Full=Dixin; AltName: Full=Coiled-coil protein DIX1; Short=Coiled-coil-DIX1; AltName: Full=DIX domain-containing protein 1 gi|29165779|gb|AAH48182.1| DIX domain containing 1 [Mus musculus] gi|38648734|gb|AAH63085.1| DIX domain containing 1 [Mus musculus] gi|48256957|gb|AAT41661.1| Ccd1Abeta1L [Mus musculus] Length = 711 Score = 37.0 bits (84), Expect = 7.9, Method: Composition-based stats. Identities = 16/192 (8%), Positives = 48/192 (25%), Gaps = 18/192 (9%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN----- 338 LEA ++ ++ + K + L D R + Sbjct: 298 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 357 Query: 339 -------LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 + + + + + + + QQ + Q L+ Sbjct: 358 PEEQLIIIRSRLDQSVEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLK 415 Query: 392 FLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + + + ++ + + + + + + R L Sbjct: 416 QELLRANMDKDELHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLFQQQQAKLEEALRKL 474 Query: 450 QSFAYKNT-LKR 460 +Y+ L+R Sbjct: 475 SDASYQQVDLER 486 >gi|331651018|ref|ZP_08352046.1| putative membrane protein [Escherichia coli M718] gi|331051472|gb|EGI23521.1| putative membrane protein [Escherichia coli M718] Length = 615 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 20/188 (10%), Positives = 49/188 (26%), Gaps = 9/188 (4%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA + Q + + + ++ P + Sbjct: 428 AAQRFNEAEHYGSYDDFRDFSRRQPLTQQQKDAARQRYQSASPEQRQAVREKMQTNPQNQ 487 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIF---RKYRHFNHIINRIKSDFLIHNIQ-----KNR 370 Q +R R+ E + + + + RI+S + R Sbjct: 488 QRREAARQRIQSASPEQRQAVREKMQTNPQIQQRREAARERIQSASPEQRQVFKEKVQQR 547 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKL-ITRIEF 429 +++ + Q V+ +EK+ R N L+ + R+ Sbjct: 548 PLNQQQRDNARQRVQSASPEQRQVFREKVQESRPQRPNDSNHTARLNNDQRSAVRERLSE 607 Query: 430 ILSHKIKS 437 + +++ Sbjct: 608 RGARRLER 615 >gi|256847359|ref|ZP_05552805.1| chromosome segregation protein SMC [Lactobacillus coleohominis 101-4-CHN] gi|256716023|gb|EEU30998.1| chromosome segregation protein SMC [Lactobacillus coleohominis 101-4-CHN] Length = 1189 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 24/190 (12%), Positives = 60/190 (31%), Gaps = 12/190 (6%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + L+ +R + L S+ K L S+Q + + + L+ Sbjct: 213 QDYLEQKQKLDQFDRTQTVRQVLRDQAELTSIRKKLGQSNQMSAQYDQQTKKAKDTLQKL 272 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 E + + + N + + +N+Q + +Q +Q L E KE+ Sbjct: 273 QENR-RQVLQQKDQAQNEVTAKVEEIAKLQNQQSLSSIRQEQRLKDQQRLTSQKQELKER 331 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIE-----------FILSHKIKSCHTSVSITTR 447 L Q +++ L + + +++ L+ +++ + Sbjct: 332 QEQLTQQLAQNEHQAAELKSKLSTERKKLKDLRSLSAAERVQRLNQELEQLQERQVDLMQ 391 Query: 448 ILQSFAYKNT 457 L + + Sbjct: 392 QLTTLHNERV 401 >gi|34532311|dbj|BAC86384.1| unnamed protein product [Homo sapiens] Length = 842 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 13/149 (8%), Positives = 54/149 (36%), Gaps = 8/149 (5%) Query: 308 NSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQ 367 + + + + + ++ + + ++ +E + +K H + + S + Sbjct: 665 AKHREVVSSLQKKIQEAQQKEEAQLQKCLGQVEHRVHQKSYHVAGYEHELSSLL----RE 720 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITR- 426 K ++ E ++ ++++ ++H + + +++ A R + + +++ R Sbjct: 721 KRQEVEGEHERRLDKMKEEHQQVMAKAREQYEAEERKQRAELLGHLTGELERLQRAHERE 780 Query: 427 ---IEFILSHKIKSCHTSVSITTRILQSF 452 + +++ R LQ Sbjct: 781 LETVRQEQHKRLEDLRRRHREQERKLQDL 809 >gi|72162546|ref|YP_290203.1| hypothetical protein Tfu_2147 [Thermobifida fusca YX] gi|71916278|gb|AAZ56180.1| band 7 protein [Thermobifida fusca YX] Length = 450 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 62/194 (31%), Gaps = 5/194 (2%) Query: 252 DWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 WT D+ D P A +A P KE++ I + + ++ Sbjct: 132 PWTRVDFVVDTSTEIPYNAPVLACPTKENVPLKSIEFFLKFRIT-NATAFVRTIGASNFD 190 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR----IKSDFLIHNIQ 367 L ++ Q R RL + + + + + + + + Sbjct: 191 LVLSSAVQDAIRQRSRLVQTENAHDLRGSDVADMQELLNRQLSRYGVQIMGCNIPDVQLP 250 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 Q L ++ + + + + + L +K +I L M E++K + + R Sbjct: 251 DQYQQHLSTRERVAKEMVAYEQEWELIRKRRIDTLLMDIERSKKTRDAKIVEVNAALNRA 310 Query: 428 EFILSHKIKSCHTS 441 ++ ++ T Sbjct: 311 RQDVAQMLEEQETE 324 >gi|331015923|gb|EGH95979.1| chromosome segregation protein SMC [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 1162 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L Q + LR + E+ ++ I + Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330 >gi|330958410|gb|EGH58670.1| cointegrate resolution protein T [Pseudomonas syringae pv. maculicola str. ES4326] Length = 326 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 29/257 (11%), Positives = 73/257 (28%), Gaps = 15/257 (5%) Query: 206 CPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAP 265 + + +LARG D H + A D+ Sbjct: 1 MQKARVALLARGENPSIDAVRIEMGNTGSKTTIHRYLKELDTAHAS-------APDINEE 53 Query: 266 TPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSR 325 A +A ++E + + L L++ + + + L Sbjct: 54 LTELVARLAQRLEEQARERIDQAHEEYETSCNDL----RQQLSTAQQQIDELQKHLQQRD 109 Query: 326 YRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVK 385 L++ L H + + + + R+ + + + + EK QH + ++ Sbjct: 110 ETLEQQAAALLHTQQTLQSTQTEQARLLQARLDLEARLQDKDGQIGSLEEKHQHAREALE 169 Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT---RIEFILSHKIKSCHTSV 442 + I +++ + +Q + + + ++ + T+ Sbjct: 170 HYRNSIKDQREHEQQRHEGQVQQLQMELRQAQQSLAMRQEDITQLNRDNERLLAENRTAQ 229 Query: 443 SITTRILQSFAYKNTLK 459 R + K TL+ Sbjct: 230 RELHRQQDLLS-KATLQ 245 >gi|152977313|ref|YP_001376830.1| chromosome segregation ATPase-like protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152026065|gb|ABS23835.1| Chromosome segregation ATPase-like protein [Bacillus cytotoxicus NVH 391-98] Length = 480 Score = 37.0 bits (84), Expect = 8.0, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 6/115 (5%) Query: 351 NHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTK 410 + ++++ + + LE Q + Q + L+ K E+I L +++ + Sbjct: 321 ESLKQQLETKDEQIQKLEQEKQKLETQMNQLQGGPESLKQQLETKDEQIQKLEQEKQKLE 380 Query: 411 NRIFYLHTHIKKLITRIEF--ILSHKIKSCHTSVSITTRILQSFAYKNT---LKR 460 ++ L + L ++E K++ + LQ +N L+R Sbjct: 381 TQMDQLQREPENLKQQLEMKDEQIQKLEQEKQKLETQMNQLQG-GPENLKQQLER 434 >gi|302188500|ref|ZP_07265173.1| exonuclease SbcC [Pseudomonas syringae pv. syringae 642] Length = 1214 Score = 37.0 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 53/148 (35%), Gaps = 4/148 (2%) Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 + L ++ Q L + + +L + + E+ R + + + + Sbjct: 238 QRLSDAQQQLKAHQTQQRQLEIKQQWLTELHRLRD----EQLAAQEALNSAQQAWDDHSG 293 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL 431 Q ++H + ++ L Q + ++ LH ++L +R Sbjct: 294 ARQTLGQLERLGPQRHRFARRVTLNAQLEPLAEQIRQHQQQLTSLHEQQQQLESRRTQAQ 353 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTLK 459 + +++ T S +LQ+F +NTL Sbjct: 354 TSLLEAQQTHSSAKPLLLQAFEAQNTLN 381 >gi|194856562|ref|XP_001968777.1| GG25057 [Drosophila erecta] gi|190660644|gb|EDV57836.1| GG25057 [Drosophila erecta] Length = 3969 Score = 37.0 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + + ++ + L + LS + L Sbjct: 2719 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2778 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 2779 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 2838 Query: 392 FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + I L +Q+K + + + + S +S L Sbjct: 2839 HLKHRLDAMIQQLEQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 2898 Query: 450 QS 451 ++ Sbjct: 2899 KT 2900 >gi|71410717|ref|XP_807640.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70871684|gb|EAN85789.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 1396 Score = 37.0 bits (84), Expect = 8.1, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 41/134 (30%), Gaps = 1/134 (0%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 L C+ +LE +++ R N + +S FL + R Sbjct: 1176 RAQLRCALQLQREAAAQLEAQIQMRKDRMVSFTNAFVRARESCFLTERRRCCRLAEKLYI 1235 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 + + + + ++ L R++ + + I ++ RI+ + + Sbjct: 1236 RRCVRRELLRDKSATVIQRAVRHWLARRRQREEEALALRTHVIAHIV-RIQSAMRRFLAQ 1294 Query: 438 CHTSVSITTRILQS 451 + Q+ Sbjct: 1295 KQYRLLRYLSQRQA 1308 >gi|301604037|ref|XP_002931667.1| PREDICTED: liprin-alpha-2-like [Xenopus (Silurana) tropicalis] Length = 1232 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 28/351 (7%), Positives = 95/351 (27%), Gaps = 20/351 (5%) Query: 110 PSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGAVIRDILQRISCR 169 PSG + + L+ K ++ + + + ++ + A ++I+ Sbjct: 146 PSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVSLERVSALEEELTAANQEIVALREQN 205 Query: 170 FPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFND 229 ++ + + E + + + + D + + ++ Sbjct: 206 AHIQRKMGTGEGPEQEALEGMEQGQKIHDKRLSNGSIDSNDDASQMVELQELLEKQNYEM 265 Query: 230 EMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLE 289 + E +L+ ++ + E+ + + + E Sbjct: 266 TQM----------------KERLSSLSARVGEVEQEAESARKELVKTEEMNTKYQRDIRE 309 Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 A + + + S ++ + +E + Sbjct: 310 AMAQKEDMEERITTLEKRYLSAQREATSIHDINDKLENELANKEAILRQMEEKNRQLQER 369 Query: 350 FNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-REQ 408 +++ + + + E Q I + K R+ +E++ + + + Q Sbjct: 370 LEMAEQKLQQT--MRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEAQLEEKNQ 427 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVS-ITTRILQSFAYKNTL 458 R ++ R+ + + + + + + KN L Sbjct: 428 ELQRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERMAALEDKNIL 478 >gi|291225470|ref|XP_002732724.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 470 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 20/190 (10%), Positives = 58/190 (30%), Gaps = 13/190 (6%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPN 316 D D++ T ++ +NL + + R + L+ Sbjct: 93 DRVRDVQ-NVQTRCGCCNSQNGDNKGQKSLNLRSEKEAVEERQREVARQQEVERLR---- 147 Query: 317 SDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 + + + + + I ++ + + + + + R+ + EK Sbjct: 148 ---LENERQQKQLEEEKHKLLRRQQEIEQELIQRKQLSQQQELEMERQRKEALRREMEEK 204 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAI---LHMLREQTKNRIFYLHTHIKKLITRIEFIL-- 431 +Q QI K + K++++A L M R + + ++ + + Sbjct: 205 KQRQAQINKLERQRQREIKQQELAHQQELEMERRHMEESRKEREANKQRQEQIRKQEIER 264 Query: 432 SHKIKSCHTS 441 +++ Sbjct: 265 QRQLELQRQR 274 >gi|241666464|ref|NP_001155899.1| hamartin isoform 4 [Homo sapiens] gi|221044412|dbj|BAH13883.1| unnamed protein product [Homo sapiens] Length = 1113 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 V + + N + ++ + +I L + N Q L + Sbjct: 698 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 757 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 EL L+ + + + ++Q+ + + + + ++ + +L + Sbjct: 758 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 817 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 818 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 872 >gi|194909958|ref|XP_001982044.1| GG11254 [Drosophila erecta] gi|190656682|gb|EDV53914.1| GG11254 [Drosophila erecta] Length = 2102 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 1/149 (0%) Query: 305 NTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIH 364 ++L N L + R +E + L FN I +++ Sbjct: 966 QEALVREESLKNHVARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACA-EE 1024 Query: 365 NIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI 424 +++ + IL+ + +E+ ++Q L+ + K ++I L + I L ++ + Sbjct: 1025 AAKRHGEEILQLRNALEKRMQQALQALQTAKDDEIEKLQERLATLQAHIESLVQQHEEAL 1084 Query: 425 TRIEFILSHKIKSCHTSVSITTRILQSFA 453 R E + H L++ + Sbjct: 1085 IRAESEKQQALLIAHRDKQAVAERLEAVS 1113 >gi|182413544|ref|YP_001818610.1| protease Do [Opitutus terrae PB90-1] gi|177840758|gb|ACB75010.1| protease Do [Opitutus terrae PB90-1] Length = 513 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 1/65 (1%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDG-QANAIVINKAPPKEQPTKKCQLHNNKREKQ 522 I + +T + I + F DG + A V+ P + K + + Sbjct: 124 VIVSPDGYILTNSHVVKGADTIKVTFGDGRELTAKVVGTDPQTDLAVIKVEAKDLPAITF 183 Query: 523 GTQGE 527 Sbjct: 184 ADSDS 188 >gi|109947607|ref|YP_664835.1| outer membrane protein 15 [Helicobacter acinonychis str. Sheeba] gi|109947627|ref|YP_664855.1| outer membrane protein 16 [Helicobacter acinonychis str. Sheeba] gi|109714828|emb|CAJ99836.1| outer membrane protein 15 [Helicobacter acinonychis str. Sheeba] gi|109714848|emb|CAJ99856.1| outer membrane protein 16 [Helicobacter acinonychis str. Sheeba] Length = 367 Score = 37.0 bits (84), Expect = 8.2, Method: Composition-based stats. Identities = 21/166 (12%), Positives = 50/166 (30%), Gaps = 13/166 (7%) Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR--KYRHFNHIINRIKSDFLIHNIQ 367 + A+ +++ L+ R ++ + L + + IN + + Sbjct: 37 MSYAIQHNNPFLNQERIKIISNAYNQINGLNQVANQVKNMPKTFEYINNNLKNNPKPSAT 96 Query: 368 KNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 + Q ++ I K + K+ ++ L T++K L + Sbjct: 97 AMQAEAYYLQSTLKNIEKIVMVSHSAPSNPKLVQALEEMQKPTADPLELVTNLKNLELQF 156 Query: 428 EFILSHKIKSCHTSVSITTRILQSFAYKN-----------TLKRGY 462 ++ + S + + + L S TL GY Sbjct: 157 NHSQNNILASLSSQTARLSNSLNSLDPSAHSKNISNMYGVTLSVGY 202 >gi|325496050|gb|EGC93909.1| hypothetical protein ECD227_0147 [Escherichia fergusonii ECD227] Length = 618 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 19/195 (9%), Positives = 51/195 (26%), Gaps = 12/195 (6%) Query: 249 HETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLN 308 H T+ D + + + +L + + + + Sbjct: 430 HSAPVTMRD----TQRQAASQQFHQREQQDDFRDYALPRRNSNTSRFNGEYYNREDWNVR 485 Query: 309 SLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK 368 + L + +R R D E + + R + + + Sbjct: 486 PPQRQLTQQQR--EKARKRYDSATPEQRQAFREKVQNQQRPLSQQQRDSARQRIQSASPE 543 Query: 369 NRQHILEKQQHIEQIVKQHLRYIFLEK------KEKIAILHMLREQTKNRIFYLHTHIKK 422 RQ EK Q+ ++ + Q R ++ +++ T Sbjct: 544 QRQAFREKAQNQQRPLSQQQRDSARQRIQSATPEQRQVFRENRLNDTSRVSRLSSEQRSA 603 Query: 423 LITRIEFILSHKIKS 437 + R+ + +++ Sbjct: 604 VRERLSERGARRLER 618 >gi|291410951|ref|XP_002721747.1| PREDICTED: CDC42-binding protein kinase beta [Oryctolagus cuniculus] Length = 1762 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 61/216 (28%), Gaps = 19/216 (8%) Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 +T +D T ++ + +L+ R I+ L + Sbjct: 544 FTTESCFSDRGCLKSTMQTHTLTEDEDVQRDLENSLQVEAY---ERRIRRLAQEKLELSR 600 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHF-------NHIINRIKSDFLIHN 365 L S QT+ L + + + + +++ + Sbjct: 601 KLQESTQTVQSLHGSTRALSSSNRDKEIKKLNEEIERLRSKVADSSRLERQLEDTVSLRQ 660 Query: 366 IQK---NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 + R LEKQ + K+ L +E E++ + + Sbjct: 661 EHEDCTQRLKGLEKQCRAARQEKEDLHKQLVEASERLKSQAKELRDAHQQRKLALQEFSE 720 Query: 423 LITRI------EFILSHKIKSCHTSVSITTRILQSF 452 L R+ + +S +++ V + + + S Sbjct: 721 LNERMAELRSQKQKVSRQLRDREEEVEVAMQKMDSL 756 >gi|239503165|ref|ZP_04662475.1| ATPase [Acinetobacter baumannii AB900] Length = 1198 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 4/203 (1%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 A +A + T A+ Q ++ + +K +L + K + DQ Sbjct: 764 AWQQASSQTAKQTWAILDARAKQLEQQEQLSQRFEQQQQELKMLSASLEQMTKQIDEIDQ 823 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQ 377 L + + + ++ + R + I + K + +Q + + Sbjct: 824 NLQEITLKGQQNNEKAVSLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTR 883 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 QH EQ + + + L Q +N + +T + I S + + Sbjct: 884 QHFEQQKQALDQLKHQY-QHTEQHQQQLDGQIQNWLKAHTDFQASDLTALIQINSAQEQD 942 Query: 438 CHTSVSITTRIL-QSFAYKNTLK 459 ++ R+L ++ + T++ Sbjct: 943 IRNRLNHAERLLSEASSALKTMQ 965 >gi|213968902|ref|ZP_03397042.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato T1] gi|301385374|ref|ZP_07233792.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato Max13] gi|302063630|ref|ZP_07255171.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato K40] gi|302133899|ref|ZP_07259889.1| chromosome segregation protein SMC [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213926201|gb|EEB59756.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato T1] Length = 1162 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L Q + LR + E+ ++ I + Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330 >gi|195392590|ref|XP_002054940.1| GJ19063 [Drosophila virilis] gi|194149450|gb|EDW65141.1| GJ19063 [Drosophila virilis] Length = 1494 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 30/239 (12%), Positives = 69/239 (28%), Gaps = 24/239 (10%) Query: 250 ETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNS 309 E L D T +A + + L N + Sbjct: 625 EQLQYLIDMVGANFNQNTTSSATTENRLVYMKNMLICLLTRICN-----------QDKHK 673 Query: 310 LLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN 369 + L N L SRY+++ + L + + I + +I + Sbjct: 674 KPENLLNQHCRLQTSRYQMNVSIQNLPKQQHNAANKNQLQLEQELKTITEKAKLQSIDQT 733 Query: 370 RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF 429 + + + +E + + ++++ + ++Q + +I ++K + + Sbjct: 734 QLIQQLEDERLELCSQ---KLEKAHVEQELMASNKKQKQLEQKIIEQTELLQKGESTTQS 790 Query: 430 ILSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILIN 488 I + R L + YK L T + L + +LI+ Sbjct: 791 HQDQIILQ-RQQLDKQQRELNALQYKLELA---------EQQVKTAEAQLQKQESLLIH 839 >gi|170085187|ref|XP_001873817.1| predicted protein [Laccaria bicolor S238N-H82] gi|164651369|gb|EDR15609.1| predicted protein [Laccaria bicolor S238N-H82] Length = 1196 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 17/153 (11%), Positives = 43/153 (28%), Gaps = 7/153 (4%) Query: 275 VPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 +L +L + + + R RL Sbjct: 152 HEDHRIHIQRQRQHHEQLLQQEQQLHHQRAQEAEHVQRVQDMERVHRQQEVERQQRLQEV 211 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 H ++ + F + + +S + RQ I E + ++ ++Q + E Sbjct: 212 ERHRMQEK-----QRFQELERQQRSQEQQRMHELERQRIQELEYRQQRALEQERQIRLQE 266 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRI 427 ++ + + + + L + L R+ Sbjct: 267 ERHRRSQEMEHHQLLRQ--EELRRPVVPLEPRM 297 >gi|187924441|ref|YP_001896083.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN] gi|187715635|gb|ACD16859.1| chromosome segregation protein SMC [Burkholderia phytofirmans PsJN] Length = 1198 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 106/384 (27%), Gaps = 22/384 (5%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139 PE G + G + T Q+ +G +E +++ + L +D+ K Sbjct: 655 PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 711 Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL---- 195 + + L++ + Q E + + I Sbjct: 712 AAIRAEAAHTQAAQVLTDARQQAERATQRVHALQMDVLK-LTQAHERYTQRSTQIREELA 770 Query: 196 -QLNTLKEGRTCPRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDW 253 ++E R R G + +L F D + + + + D Sbjct: 771 EITAQIEEQRAMRAESEANFERHDGELAELQARFEDHQLAFEALDEQLTAARGQARDLDR 830 Query: 254 TLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +AA A E + +LE + + L L Sbjct: 831 AATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDAL 890 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 ++ L +R LD L +L E + + ++ +++ Sbjct: 891 DIRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAA 945 Query: 372 HILEKQ---QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIE 428 + +Q Q V + L K + L + N I L + ++ Sbjct: 946 RLNGEQFVEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDELK 1005 Query: 429 FILSHK--IKSCHTSVSITTRILQ 450 K + + T ++ L+ Sbjct: 1006 AATERKSFLDAQSTDLNSAIETLE 1029 >gi|28870813|ref|NP_793432.1| chromosome segregation SMC protein [Pseudomonas syringae pv. tomato str. DC3000] gi|28854062|gb|AAO57127.1| chromosome segregation SMC protein, putative [Pseudomonas syringae pv. tomato str. DC3000] Length = 1162 Score = 37.0 bits (84), Expect = 8.3, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L Q + LR + E+ ++ I + Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330 >gi|330963252|gb|EGH63512.1| chromosome segregation protein SMC [Pseudomonas syringae pv. actinidiae str. M302091] Length = 1162 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L Q + LR + E+ ++ I + Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330 >gi|325917557|ref|ZP_08179759.1| hypothetical protein XVE_3767 [Xanthomonas vesicatoria ATCC 35937] gi|325536234|gb|EGD08028.1| hypothetical protein XVE_3767 [Xanthomonas vesicatoria ATCC 35937] Length = 408 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 53/201 (26%), Gaps = 8/201 (3%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 D + AE + + + + ++ + +SL L + Sbjct: 121 IGDALQDLVSRLAERLHAEADTVVAQAQARFQAQLQERTQALEQARHEADSLRTHLQRCE 180 Query: 319 QTLSCSRYRLD----RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 L R D + ++ + + L H + R+ + Sbjct: 181 TLLQAEREAGDAARSEVASRTTELAQLQERIAGLTARLAEHERHAQSLEHKHEHAREALE 240 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT---KNRIFYLHTHIKKLITRIEFIL 431 + + +Q R + +E L E + + L+ + + R + L Sbjct: 241 HYRTSVRDQREQEQRRHAHQVQELQVALRQANEALTVKNHDLMQLNRDNGQWVER-QTRL 299 Query: 432 SHKIKSCHTSVSITTRILQSF 452 ++ R + Sbjct: 300 ERELAQARQRADTQQRKRDAL 320 >gi|301049594|ref|ZP_07196546.1| nuclease sbcCD, subunit C [Escherichia coli MS 185-1] gi|300298639|gb|EFJ55024.1| nuclease sbcCD, subunit C [Escherichia coli MS 185-1] Length = 1047 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 14/153 (9%), Positives = 38/153 (24%), Gaps = 12/153 (7%) Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI-----HNI 366 L D+ + R L + L + ++ + + Sbjct: 247 NWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAAL 306 Query: 367 QKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML-----REQTKNRIFYLHTHIK 421 RQ I E ++ + K+ + Q +R + + Sbjct: 307 AHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQWNNELA 366 Query: 422 KLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 + S + ++ ++ + L + Sbjct: 367 GWRAQFSQQTSDREHLRQWQQQLTHAEQKLNAL 399 >gi|270014943|gb|EFA11391.1| hypothetical protein TcasGA2_TC011551 [Tribolium castaneum] Length = 1716 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 14/151 (9%), Positives = 51/151 (33%), Gaps = 5/151 (3%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L + +AL + L+ + ++ L+ + + +++ + S+ Sbjct: 770 EAEYEQLRNKQEALGQWESQLAEIIQWVSD-EKDARAYLQALATKMTEELDYLKHAGVSN 828 Query: 361 FLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHI 420 + + R + Q ++++ +L+ + + + +T+ + + Sbjct: 829 AMGGTDKNWRNR---RSQKLDKMELLNLQSSLQSEIQAKQAISEELSKTREALLEAQKDL 885 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + R + +K + L S Sbjct: 886 RDSRQR-NEAFALDLKRKEKQIKELQSRLDS 915 >gi|114627341|ref|XP_520334.2| PREDICTED: tuberous sclerosis 1 protein isoform 4 [Pan troglodytes] gi|114627343|ref|XP_001168992.1| PREDICTED: hamartin isoform 2 [Pan troglodytes] gi|114627345|ref|XP_001169011.1| PREDICTED: tuberous sclerosis 1 protein isoform 3 [Pan troglodytes] Length = 1163 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 V + + N + ++ + +I L + N Q L + Sbjct: 748 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 807 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 EL L+ + + + ++Q+ + + + + ++ + +L + Sbjct: 808 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 867 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 868 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 922 >gi|191889|gb|AAA37216.1| apolipoprotein A-IV [Mus musculus castaneus] Length = 435 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 20/200 (10%), Positives = 67/200 (33%), Gaps = 5/200 (2%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP-NSDQ 319 D P + +Q+++ L+ ++ L + N ++ L + Sbjct: 144 DQINTQTQEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTP 203 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ---HILEK 376 + + +D+ +L +L + NH + + + + + I + Sbjct: 204 RANELKATIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVSAKIDQL 263 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 Q+++ +V+ + + L L Q + ++ ++ + L +++ Sbjct: 264 QKNLAPLVEDVQSKVKGNTEGLQKSLKDLNRQLEQQVEEFRRTVEPMGEMFNKALVQQLE 323 Query: 437 SCHTSVSITTRILQS-FAYK 455 + + ++S ++ Sbjct: 324 QFRQQLGPNSGEVESHLSFL 343 >gi|73954773|ref|XP_850708.1| PREDICTED: similar to DIX domain containing 1 isoform 2 [Canis familiaris] Length = 691 Score = 37.0 bits (84), Expect = 8.4, Method: Composition-based stats. Identities = 23/238 (9%), Positives = 70/238 (29%), Gaps = 13/238 (5%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285 ++ +I ++ + II + G E D ++ D R +P E + + Q Sbjct: 231 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTYLETSWEEQLLEQQEH 290 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + E +I ++ + + ++L ++ + + Sbjct: 291 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 345 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + + + QQ + Q L+ + + + Sbjct: 346 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 403 Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + + ++ + + + + ++ + R L +Y+ L+R Sbjct: 404 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQVKLEEALRKLSEASYQQVDLER 460 >gi|330879148|gb|EGH13297.1| chromosome segregation protein SMC [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 1162 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 39/146 (26%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLSALRWQALNEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + Q+ L Q + LR + E+ ++ I + Sbjct: 245 GQREAVIGNQEVGFEALVADQRSADASIERLRDGHHDLSERFNLVQGRFYSVGGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS 443 I+ R+ + ++ + Sbjct: 305 QSIQHGQQRLRQLQDDLREAERARLE 330 >gi|326924668|ref|XP_003208547.1| PREDICTED: nucleoprotein TPR-like [Meleagris gallopavo] Length = 1998 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 20/222 (9%), Positives = 65/222 (29%), Gaps = 4/222 (1%) Query: 229 DEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINL 288 DE A + + + HE +L+D A +++ + Q ++ + Sbjct: 1116 DEASTLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAALNVSLNEEGKSQEQILEI 1175 Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + + + + + L + +++ + Sbjct: 1176 LRFIRRE-KEIAETRFEVAQVESLRFRQRVEHLERELQEVQDSLNAEREKVQVTAKTIAQ 1234 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQ 408 H + + LI + R+ +Q ++Q+ + + + + + Sbjct: 1235 HEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADIL--PLQESNAELSE 1292 Query: 409 TKNRIFYLHTHIKKLITRIEFILSHKIKSCH-TSVSITTRIL 449 + +++ + R + H + T + ++L Sbjct: 1293 KSGMLQAEKKLLEEDVKRWKTRTQHLLSQQKDTDLEEYRKLL 1334 >gi|241666462|ref|NP_001155898.1| hamartin isoform 3 [Homo sapiens] Length = 1163 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 V + + N + ++ + +I L + N Q L + Sbjct: 748 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 807 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 EL L+ + + + ++Q+ + + + + ++ + +L + Sbjct: 808 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 867 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 868 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 922 >gi|254565347|ref|XP_002489784.1| Protein required for accurate chromosome segregation [Pichia pastoris GS115] gi|238029580|emb|CAY67503.1| Protein required for accurate chromosome segregation [Pichia pastoris GS115] gi|328350202|emb|CCA36602.1| MAP kinase kinase kinase win1 [Pichia pastoris CBS 7435] Length = 1416 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 25/244 (10%), Positives = 64/244 (26%), Gaps = 26/244 (10%) Query: 256 ADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALP 315 D T + + + + + L + I ++L + Sbjct: 1012 VDCVPYKNGKTFDTKPSLQDFLYAFNRLNFLQLLEFSCKELSSNIDEGKIIFSNLEAEIL 1071 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLI----------HN 365 + + L L + + K + L Sbjct: 1072 DDNPPLIREYMELQHNSQLKKEMQRDFHLVKNYSRQQARGIWYNWRLQLLKGIEESVTKK 1131 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 +Q +R+ L+ ++ +EQ+ ++ L LR + T ++ Sbjct: 1132 VQTSREANLQLKKQLEQLTMEYDEQYKNRFVVLKDKLTHLRRCKQLSEAVDKTELENFRK 1191 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAY------KNTLKRGYTSIQDTNNNFITQKRNL 479 + + ++I+ + L S +N L N + K+++ Sbjct: 1192 -LFDEVHNEIEVKQQEIKSLQSQLDSLNKDIALLNENVL---------KANKVLENKKDI 1241 Query: 480 ATKT 483 + Sbjct: 1242 KEQQ 1245 >gi|195342678|ref|XP_002037927.1| GM18533 [Drosophila sechellia] gi|194132777|gb|EDW54345.1| GM18533 [Drosophila sechellia] Length = 3967 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 44/182 (24%), Gaps = 8/182 (4%) Query: 278 KEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSC------SRYRLDRL 331 + + + ++ + L + LS + L Sbjct: 2717 WRQYLQHVQSFLSCAIPEDYSSLREQQQLCAIHQNLLISQQSVLSETPLESELSEQYKAL 2776 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 L I+ R + + + + ++ ++ R Sbjct: 2777 TNLHNETLSRIMQRNGELERRVSGWNAYRQQLAALLDWLRQREAERNALQLRYIHLKRVP 2836 Query: 392 FLEKKEK--IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L+ + I L +Q+K + + + + S +S L Sbjct: 2837 HLKHRLDAMIQQLDQGEQQSKALQEQQQELARHCDDALATAMRMEQASIGQRISNLRAAL 2896 Query: 450 QS 451 ++ Sbjct: 2897 KT 2898 >gi|109016301|ref|XP_001109828.1| PREDICTED: involucrin [Macaca mulatta] Length = 496 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 19/180 (10%), Positives = 57/180 (31%), Gaps = 6/180 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKI-NTLNSLLKALPNSDQTLSCSRYRLDRLPRE 334 ++ L E +L + + K LK L + + L ++ +L Sbjct: 157 EQQQGHLKHLEQQEGQLELPEQQEGQLKHLEQQEGQLKHLEHQEVQLDLPEQQVGQLKHM 216 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 + + + + + + + ++++ + + +Q Q+ + L+ Sbjct: 217 EQQVEQ--LKHLEQQEEQLEQLEQQKGQLEHLEQQKGQLEHLEQQKGQVEHLEQQEGQLK 274 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK--IKSCHTSVSITTRILQSF 452 E+ EQ + ++ + +L +E ++ + R L+ Sbjct: 275 HLEEEKGQLKHLEQQEGQLELPEQQVGQL-KHLEQQEEQLEHLEQQKGQLEQQERQLEHL 333 >gi|268529680|ref|XP_002629966.1| Hypothetical protein CBG03693 [Caenorhabditis briggsae] gi|187036429|emb|CAP24529.1| hypothetical protein CBG_03693 [Caenorhabditis briggsae AF16] Length = 679 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 19/227 (8%), Positives = 58/227 (25%), Gaps = 9/227 (3%) Query: 220 SIEDLWHFNDEMIVRAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKE 279 S +D + + I+ + A + D + +M + Sbjct: 455 SNDDEHPLDGPHTILHAVQCPKKFIATVAPTEVADTACFVCDSNL----VSMQMIEEDAD 510 Query: 280 HLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL 339 H+ + T L + + ++ R+ + + Sbjct: 511 HIHWKQTMSTTHYYATDNWKDDFYRVTPLMCRGVLRGAYKVGKDRSGKIQRVDIIRVYRV 570 Query: 340 EIIIFRKY--RHFNHIINRIKSDFLIHNI-QKNRQHILEKQQHIEQIV--KQHLRYIFLE 394 F+ +I+ +++ + K +Q + + + + + R+ Sbjct: 571 TRHFSCWKSVPVFHRVISLVEAALPYKQMTSKQKQLLKANGNKLINRLFIQYYWRFQQSF 630 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTS 441 + + + R + K + R+ S + Sbjct: 631 LNREQVLSEYAESSKRTRAKKSWIRVVKNVARLRAATSILAAAHKNH 677 >gi|4507693|ref|NP_000359.1| hamartin isoform 1 [Homo sapiens] gi|9297077|sp|Q92574|TSC1_HUMAN RecName: Full=Hamartin; AltName: Full=Tuberous sclerosis 1 protein gi|2331281|gb|AAC51674.1| hamartin [Homo sapiens] gi|55665151|emb|CAH72112.1| tuberous sclerosis 1 [Homo sapiens] gi|119608427|gb|EAW88021.1| tuberous sclerosis 1 [Homo sapiens] gi|189442566|gb|AAI67824.1| Tuberous sclerosis 1 [synthetic construct] Length = 1164 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 16/176 (9%), Positives = 59/176 (33%), Gaps = 1/176 (0%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 V + + N + ++ + +I L + N Q L + Sbjct: 749 MWKVSLQKEQARYNQLQEQRDTMVTKLHSQIRQLQHDREEFYNQSQELQTKLEDCRNMIA 808 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 EL L+ + + + ++Q+ + + + + ++ + +L + Sbjct: 809 ELRIELKKANNKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQN 868 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 869 KHSDTTKEVEMMKAAYRKELEKNRSHVLQQTQRLDTSQKRILE-LESHLAKKDHLL 923 >gi|85712484|ref|ZP_01043533.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145] gi|85693762|gb|EAQ31711.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145] Length = 581 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 54/162 (33%), Gaps = 8/162 (4%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 + KYK + + L + S R + + + + +Y+ ++ Sbjct: 170 ISKYKERRKETENRMLHTRENLERISDVREELGQQLQKLQRQAAAAHRYKELKAQERDLR 229 Query: 359 SDFLIHNIQK--NRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + L + +Q+ L +Q+ ++ + ++ + L E+ K R+ Sbjct: 230 ALLLSSRWWQLNEKQNQLREQRSHYRLELDRWQTEQTGDEKGVISLREHAEELKQRVEQA 289 Query: 417 HTHI---KKLITRIEFIL--SHKIKSCHT-SVSITTRILQSF 452 + I RIE + +++ V+ + + Sbjct: 290 QQAVYECNHQIMRIEQAMQHQRQLEQQREARVAQLKQEREQL 331 >gi|307205548|gb|EFN83853.1| Differentially expressed in FDCP 6-like protein [Harpegnathos saltator] Length = 537 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 11/184 (5%), Positives = 56/184 (30%), Gaps = 6/184 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS-RYRLDRLPRE 334 + + + +++ ++L N ++L + + + E Sbjct: 288 EHRCIELVAEDHKGRLQWLAALQIAIQHSGEKIGYQRSLANQRRSLRQAIKQEKEETKLE 347 Query: 335 LEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHL-----R 389 L+H + + + + + + ++ + + Q +Q ++ + Sbjct: 348 LQHERQARVAAEIQARKLEALSKEECAKVQQLEDVKHKLELLLQEEKQALRDEEIVRSLQ 407 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L ++ + ++ + ++ + + R++ +++ + Sbjct: 408 ARVLREEWEKREQLEKLQEEQQKLLEMEKMKRLEFERMQQENERQLQEADLRLQQLEAER 467 Query: 450 QSFA 453 Q+ Sbjct: 468 QNLD 471 >gi|195391218|ref|XP_002054260.1| GJ22902 [Drosophila virilis] gi|194152346|gb|EDW67780.1| GJ22902 [Drosophila virilis] Length = 4774 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 16/193 (8%), Positives = 49/193 (25%), Gaps = 14/193 (7%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 + + L + I + + + + + S R + Sbjct: 629 LHIDRVMSAKQSLELTDVESRIWLNYMDQICELFRGEIPHIKHPKMDFSDLRQKYRINHT 688 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 + ++ K + + + + + + + ++Q+ EQ++ Sbjct: 689 HAPPDFSKLLQTKAKAKSPMQDAVDVPTTVQRRSVLEEERAKRQRRHEQLLNSGGVAAGA 748 Query: 394 EKKE-------KIAILHMLREQTKNR-------IFYLHTHIKKLITRIEFILSHKIKSCH 439 + A R K R I ++++ +S + + Sbjct: 749 AAASSAGSSNLQQAQSDTPRRSKKRRQADKTANIEERQQRLQEIEENRHDRMSRRRQQRF 808 Query: 440 TSVSITTRILQSF 452 + LQ Sbjct: 809 HQTQNFYKSLQLL 821 >gi|12859123|dbj|BAB31543.1| unnamed protein product [Mus musculus] Length = 305 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 14/189 (7%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 T +++ V +E + + + L + + Q + R++ Sbjct: 19 TLCSKVLVQWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQ 78 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L + + L ++ R H + I FL RQ Q + + Sbjct: 79 LGQAAQHHHWQL--LMEAMARWKAHHLGCIIKKFL------QRQAAQLLAQRLSRACFCQ 130 Query: 388 LRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV- 442 R +K++ L + + +++ R + L +++ + Sbjct: 131 WRKQLAVRKQEQWGTARALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLL 190 Query: 443 -SITTRILQ 450 TR+L+ Sbjct: 191 QEGATRLLR 199 >gi|20072272|gb|AAH26390.1| Sfi1 protein [Mus musculus] Length = 828 Score = 37.0 bits (84), Expect = 8.5, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 59/189 (31%), Gaps = 14/189 (7%) Query: 268 TGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYR 327 T +++ V +E + + + L + + Q + R++ Sbjct: 303 TLCSKVLVQWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQ 362 Query: 328 LDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQH 387 L + + L ++ R H + I+ FL RQ Q + + Sbjct: 363 LGQAAQHHRWQL--LMEAMARWKAHHLGCIRKKFL------QRQAAQLLAQRLSRACFCQ 414 Query: 388 LRYIFLEKKEK----IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV- 442 R +K++ L + + +++ R + L +++ + Sbjct: 415 WRKQLAVRKQEQWGTARALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLL 474 Query: 443 -SITTRILQ 450 TR+L+ Sbjct: 475 QEGATRLLR 483 >gi|321399332|emb|CAM67273.2| putative kinesin [Leishmania infantum JPCM5] Length = 1099 Score = 37.0 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 18/184 (9%), Positives = 62/184 (33%), Gaps = 8/184 (4%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 + + + ++ A L ++ +T + L RL Sbjct: 739 TLLLCACNGILTANSEAAAILQKMLSEREDDLRDTKRLHEEELATQA---ERFCERLKEA 795 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR-----QHILEKQQHIEQIVKQ 386 E + ++ R + R++ I+ +++ R + + ++ Q ++ ++ Sbjct: 796 LDEGAVQQQQLLDRHRDAVAQLEGRLQRSHEINEMERKRNDKEKEELRQRVQLAQERMRN 855 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITT 446 + + ++ R ++ + + L ++ + R+ L+ +S + + Sbjct: 856 EYQQEIERLRARVEGDIGDRHKSGDAVRQLQEMHEREMERLRDELNLLKRSKDSDCARLH 915 Query: 447 RILQ 450 L+ Sbjct: 916 NQLE 919 >gi|320170685|gb|EFW47584.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 854 Score = 37.0 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 29/248 (11%), Positives = 77/248 (31%), Gaps = 13/248 (5%) Query: 223 DLWHFNDEMIVRAIANSSIPIISAIGH------ETDWTLADYAADLRAPTPTGAAEMAVP 276 ++ H E I A++ + + +G E++ L + A T + Sbjct: 266 EIQHLIREGIADALSQQGLAMADQLGMLQTTLLESNKALREETAVAATQAQTSLMHIGAK 325 Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRL-DRLPREL 335 E +S E + + ++ ++ + R+ + Sbjct: 326 HAELERSIQSMFEQSSTVTRAAIQAMAASQKAEQEASVSMLRCLVAELGQEMGARMQQID 385 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLI--HNIQKNRQHILEKQQHIEQIVKQHL----R 389 L I + + ++ L +I + I E Q+ + Sbjct: 386 TRPLIQGISDMLAELQALGSAKHAEKLQLDSSISQLHSAIAELQRELLARSPDFDTGALN 445 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 L + I + R L ++++ +T ++ + +++ T+V L Sbjct: 446 QTTLALRADIQAIASSNRDASLRFESLSANLQRAVTELQQDSTTRVQQLETAVEALQHKL 505 Query: 450 QSFAYKNT 457 ++ + ++T Sbjct: 506 ETLSSEHT 513 >gi|331661170|ref|ZP_08362102.1| putative membrane protein [Escherichia coli TA206] gi|315300041|gb|EFU59279.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|331052212|gb|EGI24251.1| putative membrane protein [Escherichia coli TA206] Length = 585 Score = 37.0 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 13/179 (7%), Positives = 43/179 (24%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA A + + + N + + L K Sbjct: 407 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQR 466 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + R + + R + + + +Q N Q+ ++ Sbjct: 467 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 526 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 ++I + +++ + + + + R+ + +++ Sbjct: 527 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 585 >gi|256827567|ref|YP_003151526.1| single stranded DNA-binding protein [Cryptobacterium curtum DSM 15641] gi|256583710|gb|ACU94844.1| single stranded DNA-binding protein [Cryptobacterium curtum DSM 15641] Length = 147 Score = 37.0 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%), Gaps = 6/52 (11%) Query: 64 IDAIIWKGTLNKIEFLPEEGIEFLVIGKI--TTFP----GSSKYQIIIESLI 109 ID ++ + +G + + GK+ + + SK ++I++ + Sbjct: 53 IDCTMFGARAQSVANFLHKGSKVAIEGKLRWSQWERDGQKRSKIEVIVDEIE 104 >gi|118431127|ref|NP_147369.2| hypothetical protein APE_0620.1 [Aeropyrum pernix K1] gi|116062451|dbj|BAA79590.2| hypothetical protein [Aeropyrum pernix K1] Length = 1950 Score = 37.0 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 3/40 (7%) Query: 85 EFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRK 124 E G IT + Y I + G G L +E + Sbjct: 686 EVWERGSITLYVPRGDYTI---EVELPGLGKLYREVEVLQ 722 >gi|73954771|ref|XP_862105.1| PREDICTED: similar to DIX domain containing 1 isoform 4 [Canis familiaris] Length = 437 Score = 37.0 bits (84), Expect = 8.6, Method: Composition-based stats. Identities = 17/206 (8%), Positives = 57/206 (27%), Gaps = 11/206 (5%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 ++ D R +P E + + Q + E +I ++ + + Sbjct: 17 FSRDWRPGSPGTYLETSWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERP 76 Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 ++L ++ + + + + + + Q Sbjct: 77 LALCEPGVNPEEQL-----IIIQSRLDQSMEENQDLKKELLKCKQEARNLQGIK--DALQ 129 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQ--TKNRIFYLHTHIKKLITRIEFILSHKI 435 Q + Q L+ + + + + + ++ + + + + + Sbjct: 130 QRLTQQDTSVLQLKQELLRANMDKDELHNQNVDLQRKLDERNRLLGEYKKELGQK-ERLL 188 Query: 436 KSCHTSVSITTRILQSFAYKNT-LKR 460 + + R L +Y+ L+R Sbjct: 189 QQHQVKLEEALRKLSEASYQQVDLER 214 >gi|322821100|gb|EFZ27518.1| hypothetical protein TCSYLVIO_6271 [Trypanosoma cruzi] Length = 789 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 23/245 (9%), Positives = 67/245 (27%), Gaps = 7/245 (2%) Query: 215 ARGGGSIEDLWHFNDEMIV--RAIANSSIPIISAIGHETDWTLADYAADLRAPTPTGAAE 272 R G+ D + + E + + +AI D A + Sbjct: 397 IRNIGADNDNVNDSGEETANVHHKETNDDVMWAAIAGGIVDAYVDECAAVFKRLYHSTTI 456 Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 +E Q S NL + R+ + L L + + + R Sbjct: 457 YLREREETFQKSSQNLNMSCEERVRRMTRGMTEREQGLATQLATAQSK-AAAAQRFSDEA 515 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRY-I 391 ++ H+ ++ + ++ + + +E+ ++ Sbjct: 516 YIKLEDVTSRYNEVCARVEHLEEQLAAKKRELETERRQWQETVAKLQLERAARRQGEEGR 575 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 + ++ L + + R+ + + + ++ + +L++ Sbjct: 576 QEQLLRQVEELRAELQNVQARLNSAREEEQGIRRDADNK-KELLQRDIHRLER--ELLEA 632 Query: 452 FAYKN 456 +N Sbjct: 633 RNSQN 637 >gi|322499519|emb|CBZ34592.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 962 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 18/220 (8%), Positives = 58/220 (26%), Gaps = 10/220 (4%) Query: 245 SAIGHETDW---TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 +A+ HET + AD++ + V + + + Sbjct: 97 AAVAHETLTEAVSPVGATADVQMVAELKSELYHVSRSLVQARQQARTSEETCAELRQRCQ 156 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L + + + L + + + RE ++ ++ Sbjct: 157 GLETEKQGLRLEVQEAQERLQARQAQTEEQRREAAEAKLTVLSLTAERDELSAKVQEAWD 216 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK--IAILHMLREQTKNRIFYLHTH 419 + + + + Q ++ + L ++ + + ++ Sbjct: 217 RVAELSTALRQQETEVQRLQTGMTAAQHSKELTAQQHSHVEQQLRILQEQLRVHETDEHA 276 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 R+ L ++ +S ++ Y+ +L Sbjct: 277 SAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLA 311 >gi|311274768|ref|XP_003134462.1| PREDICTED: centrosome-associated protein CEP250-like [Sus scrofa] Length = 1594 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 4/182 (2%) Query: 274 AVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPR 333 KEHL L E + + R+ + + +Q R R L Sbjct: 796 LQRQKEHLTQDLKRREQEIVLLKERIQVLEDQRTLQTKILEEDLEQIKMSLRERGRDLA- 854 Query: 334 ELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFL 393 ++ ++ LI ++ ++ Q K L Sbjct: 855 SQRQLMQERAEEGKGQSKAQRGSLEHMKLILRDKEKEVECQQEHIQELQEHKAQLEQQLQ 914 Query: 394 EKKEKIAILHMLREQTKNRIFYLHTHIKKLITR---IEFILSHKIKSCHTSVSITTRILQ 450 K+ +L Q + I L H+++ + E L +++ +++ + L+ Sbjct: 915 GLHRKMGETSLLLTQREQEIVALQRHLQEAREQGELKEQSLQGQLEEAQRALARRDQELK 974 Query: 451 SF 452 + Sbjct: 975 AL 976 >gi|296233035|ref|XP_002807845.1| PREDICTED: LOW QUALITY PROTEIN: protein Hook homolog 2-like [Callithrix jacchus] Length = 720 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 50/176 (28%), Gaps = 5/176 (2%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE-- 336 E NLE + ++ + + L L + Sbjct: 385 EKWLFECRNLEEKYESVTKEKERLLAERDSLREANEELRCAQLQPRGLTQADLSMDPTSP 444 Query: 337 --HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLE 394 NL I + ++++ L +R+ E Q+H+E+ + Sbjct: 445 AVDNLAAEILPAELRETLLRLQLENKRLCRQEAADRERQEELQRHLEEANRARHGLETQH 504 Query: 395 KKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + L LR Q ++ L K I +L K++ + LQ Sbjct: 505 -RLNQQQLSELRAQVEDLQKSLQEQGGKTEDAISILLKRKLEEHLQKLHEADLELQ 559 >gi|72389891|ref|XP_845240.1| hypothetical protein [Trypanosoma brucei TREU927] gi|62359948|gb|AAX80373.1| hypothetical protein, conserved [Trypanosoma brucei] gi|70801775|gb|AAZ11681.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 1271 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 28/276 (10%), Positives = 83/276 (30%), Gaps = 9/276 (3%) Query: 183 GDECPKEIANAILQLNTLKEGRTCPRPDIIILARGGGSIEDLWHFNDEMIVRAIANSSIP 242 E + I + ++ + + D+ + D + R + I Sbjct: 221 DAELMRYIDMRAEEQRERQQLKQQLKSDVEAFGTHVQELVDKTWKSHLATTRRELQAPID 280 Query: 243 IISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKY 302 + + + D +A + T T + ++ ++ +++ I Sbjct: 281 TLVKQMAQHTEGMTDLSAKVHDCTTT--CRAELRLQTTTLQERVSAAEASAAVMLSRIDR 338 Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNL------EIIIFRKYRHFNHIINR 356 + +A +D T++ R +R + + E I + + + Sbjct: 339 AERKADGAQEAASRADATIAVVRDVAERAVVVSQRAMATAQRAEDAIEDRDARVAQLESH 398 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + + ++ + + + Q E V + +E+ + +R+ Sbjct: 399 LAAVSTAEKLRADLEGVRRTAQRAESGVDALRHVYERDVQEQQNE-KRQLDALMDRVSVY 457 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + L T +E I ++I + + ++ Sbjct: 458 EKQQQHLRTSLESITDNRIPQLQHRIVVLEEARETL 493 >gi|326468984|gb|EGD92993.1| hypothetical protein TESG_00553 [Trichophyton tonsurans CBS 112818] Length = 900 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 16/164 (9%), Positives = 44/164 (26%), Gaps = 15/164 (9%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 L + + ++ P + + E + ++N L + Sbjct: 561 LPESSASDRVDIVSPFPTDIDMASSQWEQPRREEQHQKHGRQLNKEQELQQREDRLQNRE 620 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIE 381 + R D+L + + + N + L H + + E QQ Sbjct: 621 QELQQREDQL--------QNREQELQHREDQLQN--REQELQHREDQLQNREQELQQR-- 668 Query: 382 QIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + E + + L + + ++ +++ Sbjct: 669 ---DNQPQNKEQELQHREDQLQNREREAQQELYQSQHGQQQVEH 709 >gi|222031950|emb|CAP74688.1| Uncharacterized protein yach [Escherichia coli LF82] gi|312944727|gb|ADR25554.1| conserved hypothetical protein [Escherichia coli O83:H1 str. NRG 857C] Length = 581 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 13/179 (7%), Positives = 43/179 (24%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 AA A + + + N + + L K Sbjct: 403 AASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHNGSYDDFRDFSRRQPLTQQQKDAARQR 462 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 + R + + R + + + +Q N Q+ ++ Sbjct: 463 YQSASPEQRQAAREKMQTNPQNQQRREAARQRIQSASPEQRQAVREKMQTNPQNQQQRDA 522 Query: 379 HIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 ++I + +++ + + + + R+ + +++ Sbjct: 523 ARQRIQSASPEQRQVFREKVQESRPQRLNDSNHTARLNNEQRSAVRERLSERGARRLER 581 >gi|153827593|ref|ZP_01980260.1| GGDEF family protein [Vibrio cholerae MZO-2] gi|149737931|gb|EDM52836.1| GGDEF family protein [Vibrio cholerae MZO-2] Length = 306 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 10 HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 68 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + E++EK A L + ++L+ + L K+ Sbjct: 69 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 122 Query: 436 KSCHTSVSITTRILQSFA 453 + R L++ + Sbjct: 123 IERTQQLYQVNRQLEALS 140 >gi|23099632|ref|NP_693098.1| DNA polymerase III alpha subunit [Oceanobacillus iheyensis HTE831] gi|22777862|dbj|BAC14133.1| DNA polymerase III (alpha subunit) [Oceanobacillus iheyensis HTE831] Length = 1106 Score = 37.0 bits (84), Expect = 8.7, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Query: 44 YRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQI 103 R A+ ++ D IDA+++ +I EEG+ + G + + QI Sbjct: 957 IRTKRGDRMAFLTISDEELEIDAVLFPDLFRQISNKVEEGMLLQISGVVE--DRKQRLQI 1014 Query: 104 IIESLIPSGSGTLLTA 119 +I+S P L Sbjct: 1015 VIQSGHPFQESELERH 1030 >gi|331228833|ref|XP_003327083.1| hypothetical protein PGTG_08860 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309306073|gb|EFP82664.1| hypothetical protein PGTG_08860 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 1340 Score = 36.7 bits (83), Expect = 8.8, Method: Composition-based stats. Identities = 12/153 (7%), Positives = 49/153 (32%), Gaps = 5/153 (3%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYR-LDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + + +A + Q + R + + + + E + H I Sbjct: 112 QAQQQRSMYPFEAQTHPIQLSAMQRQVLSHQQQQFSQLSREQFAQLQATHPAQAALLIAQ 171 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 + ++ + + + +++ + + + + ++ + + + Sbjct: 172 QQNLARVKAQAESQNLSEANTRLLLESQQKDFWQHNQRLFLPPGQAHDDPTHQQAFGNQN 231 Query: 420 IKKL-ITRIEFILSHKIKSCHTSVSITTRILQS 451 + L R++ +I+ S ++ + LQ+ Sbjct: 232 PQALHQQRLQMA---QIQQLQESTALQHQALQA 261 >gi|307709383|ref|ZP_07645841.1| DNA polymerase III subunit alpha [Streptococcus mitis SK564] gi|307619966|gb|EFN99084.1| DNA polymerase III subunit alpha [Streptococcus mitis SK564] Length = 1033 Score = 36.7 bits (83), Expect = 8.8, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 39/89 (43%), Gaps = 3/89 (3%) Query: 24 LKHIVESNLSHVCVRGE-ISGYRGIHSSGHAYFSLKDNHSRIDAIIWKGTLNKIEFLPEE 82 + ++ E++ + + V + I R A+ + D+ ++D ++ ++ +E Sbjct: 878 IGNLSENSYAIILVEVQKIKVIRTKKGENMAFLQVDDSKKKLDVTLFSDLYRQVGQEIKE 937 Query: 83 GIEFLVIGKITTFPGSSKYQIIIESLIPS 111 G + + GKI + Q+I + + + Sbjct: 938 GAFYYIKGKIQ--SRDGRLQMIAQEIREA 964 >gi|297302998|ref|XP_002806094.1| PREDICTED: hypothetical protein LOC720414, partial [Macaca mulatta] Length = 182 Score = 36.7 bits (83), Expect = 8.8, Method: Composition-based stats. Identities = 13/120 (10%), Positives = 41/120 (34%), Gaps = 1/120 (0%) Query: 330 RLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR 389 ++ +L + + ++ L+ QK R E++ ++ + + Sbjct: 15 EQLQDEAKHLRKEVESLVEKLQFQVENNQALSLLSKEQKERLQEQEEKLREQEERRLWEQ 74 Query: 390 YIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 E+KE++ + + R+ ++K R++ +++ + L Sbjct: 75 ESLREQKERLRDQGERLRKQEERLRKQEERLQKQEERLQK-QEERLRKQEERLRKQEERL 133 >gi|262369109|ref|ZP_06062438.1| ATP-dependent dsDNA exonuclease [Acinetobacter johnsonii SH046] gi|262316787|gb|EEY97825.1| ATP-dependent dsDNA exonuclease [Acinetobacter johnsonii SH046] Length = 1198 Score = 36.7 bits (83), Expect = 8.8, Method: Composition-based stats. Identities = 27/282 (9%), Positives = 64/282 (22%), Gaps = 53/282 (18%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 A+ TG ++ + + + L Sbjct: 838 IANQLIQQMTGLTDIKANEWLIQHDQHRQQTQSHYQQLKQHFDQLRHQFEQEKNQLEQLK 897 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKN--------- 369 L ++ ++ L+H + + + + Sbjct: 898 AQLQQNQTSASQIENTLQHWFNAHPDFHKPDLDALAQINLAQEQHIRQKLQHAERLVNEA 957 Query: 370 -------RQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKK 422 ++ + E H +I L+ E + + +R+Q K ++ ++ K Sbjct: 958 HAALKTMQEQLSEHLGHQPEIDPAQLQQQMQEHQAALQTQLEIRDQLKLKLELHQQNVAK 1017 Query: 423 LITRIEFILSHKIKSCHTS----------------------------VSITTRILQSFAY 454 + I I+ + + L + Sbjct: 1018 QKQFADQI--QAIQQEEHRWGKISGLMGDATGKKFRDYAQQYNLDILLEHANQQLNQLSQ 1075 Query: 455 KNTLKR-----GYTSI-QDTNNNFITQKRNLATKTRILINFF 490 + TLKR I D + +L+ L Sbjct: 1076 RYTLKRLDHSLSLAIIDHDMDGET-RSVASLSGGESFLTALA 1116 >gi|322824199|gb|EFZ29676.1| hypothetical protein TCSYLVIO_4057 [Trypanosoma cruzi] Length = 1221 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 13/200 (6%), Positives = 43/200 (21%), Gaps = 11/200 (5%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRL------IKYKINTLNSLLKALP 315 P + V + R I+R K + L+ Sbjct: 797 KHLPNVELCILKILSVLRGFHCRVEIARQRKRMHILRRFFLCIVWKKREQRRLKCLREER 856 Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRK-----YRHFNHIINRIKSDFLIHNIQKNR 370 + L R + ++ + + + ++ + + R Sbjct: 857 QGSRMLRRRREEVLDAVLRIQCAARRWLASRVRGVLWAELQRKHHQARVIQRTYRRHVGR 916 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + I ++ ++ + + + + + Sbjct: 917 RWIRALKEEARLEEEKRMVGQIIHYSASKIQATWRMYSERRSQAEYLHFLLWERHILSSR 976 Query: 431 LSHKIKSCHTSVSITTRILQ 450 + ++ + R L Sbjct: 977 IQRAWRAHKARLQSHWRRLH 996 >gi|308186270|ref|YP_003930401.1| Chromosome partition protein mukB [Pantoea vagans C9-1] gi|308056780|gb|ADO08952.1| Chromosome partition protein mukB [Pantoea vagans C9-1] Length = 1495 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 50/165 (30%), Gaps = 6/165 (3%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + L+ A +Q L+ + R+ + Sbjct: 442 EWQESFQAKEEEATERLLRLEQKLSVAEAAHSQFEQALALVTSIAGDVTRQDAWQTGREL 501 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 R + H +++ S L N + R + + + ++ + L Sbjct: 502 LRDASNQRHHADQLSSLRLRLNELEQRLREQHEAERLLA-----EFCKRQGQQYEADALA 556 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 L+++ + +I L++ + + ++ +++ ++ T Sbjct: 557 GLQQELEAQIEQLNSSVSDAGEQ-RMMMRQELEQLRERITSLTAR 600 >gi|220939483|emb|CAX15524.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] gi|220941681|emb|CAX15984.1| Sfi1 homolog, spindle assembly associated (yeast) [Mus musculus] Length = 1135 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 46/173 (26%), Gaps = 8/173 (4%) Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 E I R + R+ R ++ + Sbjct: 618 QWREVTSVQIYYRQKEAAALREARKALDRGRLQNWFQHWRFCSQRAAQQRFQLGQAAQHH 677 Query: 346 KYRHFNHIINRIKSDFL--IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK----I 399 ++ + R K+ L I RQ Q + + R +K++ Sbjct: 678 HWQLLMEAMARWKAHHLGCIRKKFLQRQAAQLLAQRLSRACFCQWRKQLAVRKQEQWGTA 737 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV--SITTRILQ 450 L + + +++ R + L +++ + TR+L+ Sbjct: 738 RALWLWAFSLQAKVWTAWLGFVLERRRKKARLERAMQAYQQQLLQEGATRLLR 790 >gi|170649606|gb|ACB21194.1| spindle assembly associated Sfi1 homolog isoform a (predicted) [Callicebus moloch] Length = 1244 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 20/228 (8%), Positives = 56/228 (24%), Gaps = 22/228 (9%) Query: 253 WTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLK 312 T+ T + ++ + L+ + Sbjct: 716 RTICSKVLVQWRETASVQIYYRQQEDCAIREARKVLDRGCLRTWFQRWWDCSRRSAQQRL 775 Query: 313 ALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQH 372 L + Q ++ H + +R ++ + S RQ Sbjct: 776 QLERAAQHHHQQLLLEGLARWKMHHLACVRKRLLHRQSTQLLAQRLSWTCFRQW---RQQ 832 Query: 373 ILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILS 432 + ++Q + V+ + F + + A + + + L ++ ++ + Sbjct: 833 LAARRQEQQASVRALWFWAFSLQAKVWATWLAFVLERRRKKARLQQALEAYQGQLLQEGA 892 Query: 433 HKI-------------------KSCHTSVSITTRILQSFAYKNTLKRG 461 ++ S+ R + + L RG Sbjct: 893 TRLLHFAASMKASRQQLQAQQQVQAAHSLHRAVRRCATLWKQKVLGRG 940 >gi|154687056|ref|YP_001422217.1| DNA polymerase III DnaE [Bacillus amyloliquefaciens FZB42] gi|154352907|gb|ABS74986.1| DnaE [Bacillus amyloliquefaciens FZB42] Length = 1115 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Query: 52 HA-YFSLKDNHSRIDAIIWKGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIES 107 H + +L D ++A+++ ++ L EEG GK+ K Q I+ S Sbjct: 975 HMAFLTLSDETGEMEAVVFPDQYRRLSPLLEEGALLFAAGKME--ERQEKTQFIMSS 1029 >gi|58037237|ref|NP_082021.1| coiled-coil domain-containing protein 57 [Mus musculus] gi|81892689|sp|Q6PHN1|CCD57_MOUSE RecName: Full=Coiled-coil domain-containing protein 57 gi|33989766|gb|AAH56480.1| Coiled-coil domain containing 57 [Mus musculus] gi|123288579|emb|CAM27536.1| coiled-coil domain containing 57 [Mus musculus] gi|123289510|emb|CAM22544.1| coiled-coil domain containing 57 [Mus musculus] Length = 1016 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 60/171 (35%), Gaps = 3/171 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 S L L + + AL + L ++ +L RL + +NL++ Sbjct: 4 LCSERELNELLARKEEEWRVLQAHRAQLQEAALQAAQNRLEETQGKLQRLQEDFVYNLQV 63 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + R + + ++ Q + + ++Q + + R + + + + Sbjct: 64 LEERDRELERYDVEFTQARQREEAQQAEASELKIEVAKLKQDLTREARRVGELQHQHQLM 123 Query: 402 LHMLREQTKNRIFYLHTHIKKLIT---RIEFILSHKIKSCHTSVSITTRIL 449 L R + + ++ + R+E+ L K+K +++ + L Sbjct: 124 LQEHRLELERVHSDKNSELAHQREQNERLEWELERKLKELDGELALQRQEL 174 >gi|17221403|emb|CAD10419.2| SMC protein [Burkholderia cepacia] Length = 1172 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 52/385 (13%), Positives = 110/385 (28%), Gaps = 24/385 (6%) Query: 80 PEEGIEFLVIGKITTFPGSSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKN 139 PE G + G + T Q+ +G +E +++ + L +D+ K Sbjct: 629 PEGGSFVVKAGHVVT---RVGVQLYAADSEQAGMLARQQEIENLARQVRAQALLADEAKA 685 Query: 140 PIPFIPKIIAVITSPTGAVIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAIL---- 195 V + + L++ + Q E + + I Sbjct: 686 AAIRAEAAHTQAAQALTDVRQQAERATQRVHALQMDVLK-LTQAHERYTQRSTQIREELA 744 Query: 196 -QLNTLKEGRTCPRPDIIILARGGGSIEDLWH-FNDEMIVRAIANSSIPIISAIGHETDW 253 ++E R R G + +L F D + + + + D Sbjct: 745 EITAQIEEQRAMRAESEANFERHDGELAELQARFEDHQLAFEALDEELTAARGQARDLDR 804 Query: 254 TLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLL 311 D +AA A E + +LE + + L L Sbjct: 805 AATDARFAARNMANRIDELKRSIQVAHEQSERVAASLEDARAELETINEQTAHTGLQDAL 864 Query: 312 KALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQ 371 ++ L +R LD L +L E + + ++ +++ Sbjct: 865 DIRAVKEEALHAARLELDDLTAKLRAADETRLTA-----ERALQPLRDRINELQLKEQAA 919 Query: 372 HILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLI----TRI 427 + +Q IEQ+ + L+ K + + RI T + + + Sbjct: 920 RLNG-EQFIEQLAAAGVDEAQLQAKLTPDMKPSYLQGEVTRINNAITALGPVNMAALDEL 978 Query: 428 EFILSHK--IKSCHTSVSITTRILQ 450 + K + + T ++ L+ Sbjct: 979 KAATERKSFLDAQSTDLNSAIETLE 1003 >gi|148546830|ref|YP_001266932.1| chromosome segregation protein SMC [Pseudomonas putida F1] gi|148510888|gb|ABQ77748.1| condensin subunit Smc [Pseudomonas putida F1] Length = 1162 Score = 36.7 bits (83), Expect = 8.9, Method: Composition-based stats. Identities = 17/162 (10%), Positives = 45/162 (27%), Gaps = 6/162 (3%) Query: 298 RLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRI 357 R + + L L + L + L ++ ++ + + ++ Sbjct: 185 RRTQENLARLTDLREELERQLERLHRQAQAAEKYREYKAQERQMKARLSALRWRDLDEQV 244 Query: 358 KSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + Q L +Q + LR E E+ + I + Sbjct: 245 RQRESVIGDQGVSHEALVAEQRNADASIERLRDGHHELSERFNQVQGRFYSVAGDIARVE 304 Query: 418 THIKKLITRIEFILSHKIKSCHTSVS------ITTRILQSFA 453 I+ R+ + ++ T + +L + + Sbjct: 305 QSIQHGQQRLRQLQDDFKEAERTRLETESHLGHDRTLLATLS 346 >gi|297273653|ref|XP_002800650.1| PREDICTED: fas-binding factor 1-like [Macaca mulatta] Length = 1101 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 19/173 (10%), Positives = 48/173 (27%), Gaps = 20/173 (11%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 AR + + + + L + Q RL L R + + + Sbjct: 623 ARYLSHCQEAEQARAELTAQHQRRLAATAQEKDQEMQRLQELQRASILEMRRDHEEQLQR 682 Query: 350 FNHI------------INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 + + + +I ++K + E +E + L ++ Sbjct: 683 LKLLKDREVDAATSATSHTRSLNSIIQQMEKFSSSLHELSSRVEASHLTTSQERELGIRQ 742 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + L L+E+ + + I ++ +R+L+ Sbjct: 743 RDEQLRALQERLGQQQRDMEEE--------RSRQQEIIGKMEARLNEQSRLLE 787 >gi|307727248|ref|YP_003910461.1| hypothetical protein BC1003_5250 [Burkholderia sp. CCGE1003] gi|307587773|gb|ADN61170.1| protein of unknown function DUF802 [Burkholderia sp. CCGE1003] Length = 922 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 21/237 (8%) Query: 228 NDEMIVRAIANSSIPI------ISAIGHETDWTLADYAADLRAPTPTGAAEMAVPVKEHL 281 ++E + A + G + + LA + A L A + + E Sbjct: 467 DEERLAAWSAKLDTMVATLGKEWQQAGEQNEARLAAWTAKLDALATSLGEKW-QQSGEQN 525 Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 ++ L A L+++ L + + L L RL ++ + E Sbjct: 526 EARLAAWTAELDSLSTTLGETLRQSGEQNEARLAAWTAKLDSLATRLGDTWQQTGEHNEA 585 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI 401 + + + + + ++N + ++ + ++ A Sbjct: 586 RLAAWTAQLDALATSLGKTW-REAGEQNEARLATWTAKLDALAATLGEKWQQSGEQNEA- 643 Query: 402 LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 R+ + L T + L + ++ T L + TL Sbjct: 644 ----------RLAAWTAELDSLSTTLGQTLQQSGEQNEARLAAWTAKLDAL--AATL 688 >gi|196012012|ref|XP_002115869.1| hypothetical protein TRIADDRAFT_30095 [Trichoplax adhaerens] gi|190581645|gb|EDV21721.1| hypothetical protein TRIADDRAFT_30095 [Trichoplax adhaerens] Length = 865 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 73/196 (37%), Gaps = 12/196 (6%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 ++ + D E+ E + L L + + + K ++ ++L K L Sbjct: 521 MSCSSKDRETMKRKKLDEVLQRQSEDERRKLQELRNGADLKLRQFRKEQLLCHHNLEKQL 580 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIIN-RIKSDFLIHNIQKNRQHI 373 + L+ + R D+ L+ +LEII + +H I + R+ H I+ + ++ Sbjct: 581 LQQE--LNFMQQRKDQSHETLQRHLEIINDTESKHMKVIQDLRLAQQQKQHRIEWDNENE 638 Query: 374 LEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRI------ 427 E+Q+ EQ KQ + + K ++ Q + + + K ++ Sbjct: 639 YERQRRNEQRKKQLIAQRQQPRNLKTQK-DRIKRQFADMVKTQNRQFKSYEKQLLQREPR 697 Query: 428 --EFILSHKIKSCHTS 441 +S ++K Sbjct: 698 EKHREISKQLKEERNR 713 >gi|82544120|ref|YP_408067.1| tail length tape measure protein precursor [Shigella boydii Sb227] gi|81245531|gb|ABB66239.1| putative tail length tape measure protein precursor [Shigella boydii Sb227] gi|320187447|gb|EFW62137.1| Phage tail length tape-measure protein 1 [Shigella flexneri CDC 796-83] Length = 1013 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680 >gi|78043348|ref|YP_360827.1| KID repeat-containing protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995463|gb|ABB14362.1| KID repeat protein [Carboxydothermus hydrogenoformans Z-2901] Length = 223 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 5/110 (4%), Positives = 39/110 (35%), Gaps = 8/110 (7%) Query: 341 IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIA 400 + +++ + ++ ++ + +Q ++++ + ++++ Sbjct: 5 QFTQEVLKALSNLNSHLQRID--QSLFDLNTKVTNIEQRLDRVEQ-----RLENVEQRLE 57 Query: 401 ILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + ++ + R+ + + K+ R++ + ++ + L Sbjct: 58 NVEQRLDRVEQRLDSVEKRLDKVEERLDK-VEQRLDRVEQRLDKVEERLD 106 >gi|15641229|ref|NP_230861.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121730346|ref|ZP_01682706.1| GGDEF family protein [Vibrio cholerae V52] gi|147674755|ref|YP_001216786.1| GGDEF family protein [Vibrio cholerae O395] gi|153801903|ref|ZP_01956489.1| GGDEF family protein [Vibrio cholerae MZO-3] gi|229505191|ref|ZP_04394701.1| GGDEF family protein [Vibrio cholerae BX 330286] gi|229511139|ref|ZP_04400618.1| GGDEF family protein [Vibrio cholerae B33] gi|229518258|ref|ZP_04407702.1| GGDEF family protein [Vibrio cholerae RC9] gi|229529695|ref|ZP_04419085.1| GGDEF family protein [Vibrio cholerae 12129(1)] gi|229608210|ref|YP_002878858.1| GGDEF family protein [Vibrio cholerae MJ-1236] gi|254848341|ref|ZP_05237691.1| GGDEF domain-containing protein [Vibrio cholerae MO10] gi|255745620|ref|ZP_05419568.1| GGDEF family protein [Vibrio cholera CIRS 101] gi|262159105|ref|ZP_06030217.1| GGDEF family protein [Vibrio cholerae INDRE 91/1] gi|262169463|ref|ZP_06037155.1| GGDEF family protein [Vibrio cholerae RC27] gi|298498684|ref|ZP_07008491.1| GGDEF family protein [Vibrio cholerae MAK 757] gi|9655696|gb|AAF94375.1| GGDEF family protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121627904|gb|EAX60483.1| GGDEF family protein [Vibrio cholerae V52] gi|124122548|gb|EAY41291.1| GGDEF family protein [Vibrio cholerae MZO-3] gi|146316638|gb|ABQ21177.1| GGDEF family protein [Vibrio cholerae O395] gi|227013133|gb|ACP09343.1| GGDEF family protein [Vibrio cholerae O395] gi|229333469|gb|EEN98955.1| GGDEF family protein [Vibrio cholerae 12129(1)] gi|229344973|gb|EEO09947.1| GGDEF family protein [Vibrio cholerae RC9] gi|229351104|gb|EEO16045.1| GGDEF family protein [Vibrio cholerae B33] gi|229357414|gb|EEO22331.1| GGDEF family protein [Vibrio cholerae BX 330286] gi|229370865|gb|ACQ61288.1| GGDEF family protein [Vibrio cholerae MJ-1236] gi|254844046|gb|EET22460.1| GGDEF domain-containing protein [Vibrio cholerae MO10] gi|255736695|gb|EET92092.1| GGDEF family protein [Vibrio cholera CIRS 101] gi|262022276|gb|EEY40985.1| GGDEF family protein [Vibrio cholerae RC27] gi|262029290|gb|EEY47942.1| GGDEF family protein [Vibrio cholerae INDRE 91/1] gi|297543017|gb|EFH79067.1| GGDEF family protein [Vibrio cholerae MAK 757] Length = 372 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 76 HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + E++EK A L + ++L+ + L K+ Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188 Query: 436 KSCHTSVSITTRILQSFA 453 + R L++ + Sbjct: 189 IERTQQLYQVNRQLEALS 206 >gi|262191904|ref|ZP_06050072.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae CT 5369-93] gi|262032204|gb|EEY50774.1| pseudouridylate synthase LSU rRNA-specific [Vibrio cholerae CT 5369-93] Length = 474 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 13/122 (10%), Positives = 31/122 (25%), Gaps = 11/122 (9%) Query: 338 NLEIIIFRKYRHFNHIINRIKSDFLI-------HNIQKNRQHILEKQQHIEQIVKQHLRY 390 N ++ + + +K L ++Q KQQ + Q + + Sbjct: 42 NQQVREQETDPELAELASALKQSQLQAEHELSQRRTLHSKQRHFRKQQRL-QAEELPEKE 100 Query: 391 IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEF---ILSHKIKSCHTSVSITTR 447 + Q + I L R++ + + + + Sbjct: 101 KHTLLARLAEESVQQKRQLQCLKQEWEQRIAALQHRLDHKLMRIEQLKQQRKQRSAALQK 160 Query: 448 IL 449 L Sbjct: 161 KL 162 >gi|189344715|gb|ACD92726.1| downregulated in ovarian cancer 1-like protein [Mus musculus] Length = 1131 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 59/181 (32%), Gaps = 4/181 (2%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + L+ +E I+ + + K + K+ + L RL +L + Sbjct: 150 ESHRRILEQLLMVERSHRQTIMEMEEEKRKHKEYMKKSDEFIN-LLEQECERLKKLIDQE 208 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + E K + + + + + Q L Q +++ Q L E Sbjct: 209 TASQEKKEQEKEKRIKTLKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQALTTSAKET 268 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452 + K+A+ ++ + + L ++ T + K+ + + + L + Sbjct: 269 QGKLALAEARAQEEEQKATRLEKELQTQTTEFHQNQDKIMAKLTNEDSQNRQLRQKLAAL 328 Query: 453 A 453 + Sbjct: 329 S 329 >gi|160387022|sp|Q6P6L0|FIL1L_MOUSE RecName: Full=Filamin A-interacting protein 1-like; AltName: Full=Protein down-regulated in ovarian cancer 1 homolog; Short=DOC-1 Length = 1131 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 59/181 (32%), Gaps = 4/181 (2%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + L+ +E I+ + + K + K+ + L RL +L + Sbjct: 150 ESHRRILEQLLMVERSHRQTIMEMEEEKRKHKEYMKKSDEFIN-LLEQECERLKKLIDQE 208 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + E K + + + + + Q L Q +++ Q L E Sbjct: 209 TASQEKKEQEKEKRIKTLKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQALTTSAKET 268 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452 + K+A+ ++ + + L ++ T + K+ + + + L + Sbjct: 269 QGKLALAEARAQEEEQKATRLEKELQTQTTEFHQNQDKIMAKLTNEDSQNRQLRQKLAAL 328 Query: 453 A 453 + Sbjct: 329 S 329 >gi|153831070|ref|ZP_01983737.1| GGDEF family protein [Vibrio cholerae 623-39] gi|148873451|gb|EDL71586.1| GGDEF family protein [Vibrio cholerae 623-39] Length = 372 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 76 HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + E++EK A L + ++L+ + L K+ Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188 Query: 436 KSCHTSVSITTRILQSFA 453 + R L++ + Sbjct: 189 IERTQQLYQVNRQLEALS 206 >gi|126308711|ref|XP_001377506.1| PREDICTED: similar to hCG1989313, [Monodelphis domestica] Length = 1163 Score = 36.7 bits (83), Expect = 9.0, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 9/132 (6%) Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 L +L+ + LE + R I N +S I+ ++++ + Sbjct: 624 LETQVRKLELERTQQHILLESLQQRHQADLELIENAHRS-----RIKVLETSYQQREERL 678 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI----K 436 ++ + +E L Q + R+ + I R++ + I K Sbjct: 679 QRENEDLTAQYLSHCQEAEHARAELLAQHQRRLAAAEQEKDQEIERLQNLQRASILEIRK 738 Query: 437 SCHTSVSITTRI 448 + R+ Sbjct: 739 DHEEQLQRLKRL 750 >gi|327483913|gb|AEA78320.1| GGDEF family protein [Vibrio cholerae LMA3894-4] Length = 372 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 76 HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + E++EK A L + ++L+ + L K+ Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188 Query: 436 KSCHTSVSITTRILQSFA 453 + R L++ + Sbjct: 189 IERTQQLYQVNRQLEALS 206 >gi|321399575|emb|CAM68429.2| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 962 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 18/220 (8%), Positives = 58/220 (26%), Gaps = 10/220 (4%) Query: 245 SAIGHETDW---TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 +A+ HET + AD++ + V + + + Sbjct: 97 AAVAHETLTEAVSPVGATADVQMVAELKSELYHVSRSLVQARQQARTSEETCAELRQRCQ 156 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L + + + L + + + RE ++ ++ Sbjct: 157 GLETEKQGLRLEVQEAQERLQARQAQTEEQRREAAEAKLTVLSLTAERDELSAKVQEAWD 216 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK--IAILHMLREQTKNRIFYLHTH 419 + + + + Q ++ + L ++ + + ++ Sbjct: 217 RVAELSTALRQQETEVQRLQTGMTAAQHSKELTAQQHSHVEQQLRILQEQLRVHETDEHA 276 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 R+ L ++ +S ++ Y+ +L Sbjct: 277 SAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLA 311 >gi|304397084|ref|ZP_07378963.1| chromosome segregation and condensation protein MukB domain protein [Pantoea sp. aB] gi|304355233|gb|EFM19601.1| chromosome segregation and condensation protein MukB domain protein [Pantoea sp. aB] Length = 1495 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 16/165 (9%), Positives = 48/165 (29%), Gaps = 6/165 (3%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIII 343 + L+ A +Q L+ + R+ + Sbjct: 442 EWQESFQAKEEEATERLLRLEQKLSVAEAAHSQFEQALALVTSIAGDVSRQDAWQTGREL 501 Query: 344 FRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILH 403 R + H ++ S L N + R + + + + + L Sbjct: 502 LRDASNQRHHAEQLSSLRLRLNELEQRLREQHEAERLLA-----EFCKRQGQHYEADALA 556 Query: 404 MLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 L+++ + +I L++ + + ++ +++ ++ T Sbjct: 557 GLQQELEAQIEQLNSSVSDAGEQ-RMMMRQELEQLRERITSLTAR 600 >gi|294636171|ref|ZP_06714591.1| gifsy-1 prophage VmtH [Edwardsiella tarda ATCC 23685] gi|291090537|gb|EFE23098.1| gifsy-1 prophage VmtH [Edwardsiella tarda ATCC 23685] Length = 953 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 47/399 (11%), Positives = 104/399 (26%), Gaps = 50/399 (12%) Query: 98 SSKYQIIIESLIPSGSGTLLTALEKRKKKLLEEGLFSDQHKNPIPFIPKIIAVITSPTGA 157 S+ Q + SL SG+G + + + + G F+ + + + T + Sbjct: 250 RSELQALASSL--SGNGITQGKMAEVLAQTVSSGAFTGSSVSMVANAAARLEQATGASID 307 Query: 158 VIRDILQRISCRFPLRVIIFPVKVQGDECPKEIANAILQLNTLKEGRTCPRPDIIILARG 217 + Q ++ A+ L+ T + + I Sbjct: 308 ATIE--------------------QFKRLQQDPVTAVKALDEQMHFLTATQLEQITTLAS 347 Query: 218 GGSIEDLWHFNDEMIVRAIANSSIPIISAIGH-ETDWTLADYAADLRAPTPTGAAEMAVP 276 G ++ + AI + + +G E W A T + Sbjct: 348 QGREQEAARVAMDAYATAIHTQTAGLRENLGALENAWRAVKETASGAWDTMLSIGRDVL- 406 Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 ++ + +L L K T+ ++ +L E Sbjct: 407 ----IRDRVEQTRRQLEEAEKNLSNLKQGTIPGFGINTGAIEKQQQLVSQLRKQLGELSE 462 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 + + I + + Q RQ+ ++QH+ + + Y E K Sbjct: 463 QSYQEAIKSAREKAERNEQERQKRQFNADQQLKRQYETAEEQHLRSLARIKNSYASKEVK 522 Query: 397 EKIAILHMLRE------------QTKNRIFYLHTHIKKLIT--RIEFILSHKIKSCHTSV 442 E R Q + + K R+E + ++ + Sbjct: 523 ELAIKRENERYEKSLSHGGTTRLQGDSLADSYSQRLAKTREALRLERAGAQRLTQSEQDL 582 Query: 443 SITTRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLAT 481 + L +G + + + + L Sbjct: 583 IALRQRLNDL-------KGRSLTKTEQ-SVVANAAVLEK 613 >gi|229521336|ref|ZP_04410755.1| GGDEF family protein [Vibrio cholerae TM 11079-80] gi|229341434|gb|EEO06437.1| GGDEF family protein [Vibrio cholerae TM 11079-80] Length = 372 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 76 HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + E++EK A L + ++L+ + L K+ Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188 Query: 436 KSCHTSVSITTRILQSFA 453 + R L++ + Sbjct: 189 IERTQQLYQVNRQLEALS 206 >gi|261365297|ref|ZP_05978180.1| SMC family protein [Neisseria mucosa ATCC 25996] gi|288566221|gb|EFC87781.1| SMC family protein [Neisseria mucosa ATCC 25996] Length = 1160 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ ++ RI Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448 + + RI +++ + + Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353 >gi|212544926|ref|XP_002152617.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] gi|210065586|gb|EEA19680.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224] Length = 1106 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 24/207 (11%), Positives = 58/207 (28%), Gaps = 13/207 (6%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 +D+ + +E Q LEA+ + ++ L AL Sbjct: 341 LSDIPESPQPDKEQQEESEEERQQRGETMLEAQRRQSNAQELEEMQQNRQHLRDALQEWR 400 Query: 319 QTLSCSRYRLDRLPRELEHNLEII--IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 R + + + + R+ + IH ++ Sbjct: 401 TIQDTQRGLTEEQQETRRQQMGQLSALRRRMWELGQRQH-------IHMLESQILDREWD 453 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIK 436 +Q +++ + Q + + + ++RE+ + H + R I+ Sbjct: 454 EQRLDEQLDQVQGQRESLRNQLQQLQQLMRERGLRLDEQVQEHEQLEELRRLGQQERHIE 513 Query: 437 SCHTSVSITTRILQSF-AYKNTLKRGY 462 + L+ T ++GY Sbjct: 514 ---QRLRELRHQLEKIRDTLRTQRQGY 537 >gi|188492478|ref|ZP_02999748.1| gifsy-1 prophage VmtH [Escherichia coli 53638] gi|188494075|ref|ZP_03001345.1| gifsy-1 prophage VmtH [Escherichia coli 53638] gi|188487677|gb|EDU62780.1| gifsy-1 prophage VmtH [Escherichia coli 53638] gi|188489274|gb|EDU64377.1| gifsy-1 prophage VmtH [Escherichia coli 53638] Length = 1013 Score = 36.7 bits (83), Expect = 9.1, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680 >gi|301777990|ref|XP_002924415.1| PREDICTED: hamartin-like [Ailuropoda melanoleuca] Length = 1168 Score = 36.7 bits (83), Expect = 9.2, Method: Composition-based stats. Identities = 15/173 (8%), Positives = 60/173 (34%), Gaps = 2/173 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + Q+ L+ + + ++ +L + + N Q L + EL Sbjct: 752 SMQKEQARYSQLQEQRDTMVTQLHSQIRQLQHDREEFY-NQSQELQTKLEDCRNMIAELR 810 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 L+ + + + ++Q+ + + + + ++ + +L + + Sbjct: 811 LELKKANSKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQSKHS 870 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 871 DTTKEVEMMKAACRKELEKNRSHVLQQNQRLDTSQKRILE-LESHLAKKDHLL 922 >gi|288961793|ref|YP_003452103.1| hypothetical protein AZL_c02660 [Azospirillum sp. B510] gi|288914073|dbj|BAI75559.1| hypothetical protein AZL_c02660 [Azospirillum sp. B510] Length = 829 Score = 36.7 bits (83), Expect = 9.2, Method: Composition-based stats. Identities = 15/165 (9%), Positives = 39/165 (23%), Gaps = 28/165 (16%) Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 L R + R + ++N + L + + R Sbjct: 300 EWLQSRLDELRQDMTVTGRAAVEAMRSETGMVKGRDAPLVNE-EMSALNAQLAEARTAQA 358 Query: 375 EKQQHIEQIVKQHL---------------------------RYIFLEKKEKIAILHMLRE 407 Q + Q+ E + + H Sbjct: 359 NAQARLRQLQSVRPGNPESLTGTDIGGDPLITGLRQRQAALNAQLAELRAQYGDRHPALN 418 Query: 408 QTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSF 452 + + L+ + + R+ L +++ + +R L++ Sbjct: 419 RPTAELRELNATLATELDRLVRSLRGEVEQQVAKIQDLSRRLEAL 463 >gi|281354495|gb|EFB30079.1| hypothetical protein PANDA_013744 [Ailuropoda melanoleuca] Length = 1167 Score = 36.7 bits (83), Expect = 9.2, Method: Composition-based stats. Identities = 15/173 (8%), Positives = 60/173 (34%), Gaps = 2/173 (1%) Query: 277 VKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELE 336 + Q+ L+ + + ++ +L + + N Q L + EL Sbjct: 753 SMQKEQARYSQLQEQRDTMVTQLHSQIRQLQHDREEFY-NQSQELQTKLEDCRNMIAELR 811 Query: 337 HNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 L+ + + + ++Q+ + + + + ++ + +L + + Sbjct: 812 LELKKANSKVCHTELLLSQVSQKLSNSESVQQQMEFLNRQLLVLGEVNELYLEQLQSKHS 871 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRIL 449 + + M++ + + +H+ + R++ ++ + ++ +L Sbjct: 872 DTTKEVEMMKAACRKELEKNRSHVLQQNQRLDTSQKRILE-LESHLAKKDHLL 923 >gi|225076848|ref|ZP_03720047.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens NRL30031/H210] gi|224951834|gb|EEG33043.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens NRL30031/H210] Length = 1161 Score = 36.7 bits (83), Expect = 9.2, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ ++ RI Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448 + + RI +++ + + Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353 >gi|332088780|gb|EGI93892.1| phage tail tape measure protein, lambda family [Shigella boydii 5216-82] Length = 1013 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680 >gi|320179477|gb|EFW54433.1| Phage tail length tape-measure protein 1 [Shigella boydii ATCC 9905] Length = 1013 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680 >gi|194433926|ref|ZP_03066198.1| gifsy-1 prophage VmtH [Shigella dysenteriae 1012] gi|194417798|gb|EDX33895.1| gifsy-1 prophage VmtH [Shigella dysenteriae 1012] gi|332098811|gb|EGJ03769.1| phage tail tape measure protein, lambda family [Shigella dysenteriae 155-74] Length = 1013 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680 >gi|168030872|ref|XP_001767946.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680788|gb|EDQ67221.1| predicted protein [Physcomitrella patens subsp. patens] Length = 588 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 6/71 (8%) Query: 431 LSHKIKSCHTSVSITTRILQSFAYKNTLKRGYTSIQDTNNNF-ITQKRNLATKTRILINF 489 + ++ ++ KN LK+GY I + + + +L + NF Sbjct: 148 IIRGMRDLQIKLARLEENTSINNSKNVLKQGYGIICWKDGKIALKDREDL-----LQTNF 202 Query: 490 FDGQANAIVIN 500 G A+V + Sbjct: 203 GKGGMRALVQD 213 >gi|168008489|ref|XP_001756939.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] gi|162691810|gb|EDQ78170.1| SWI/SNF class chromatin remodeling complex protein [Physcomitrella patens subsp. patens] Length = 2486 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 14/139 (10%), Positives = 43/139 (30%), Gaps = 8/139 (5%) Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL----E 375 + + RL L + +E + + +RQ I Sbjct: 910 RIEEKKLRLLELQHRVRDEVEQQQQEIMAMGERAYRKFVRLCDRQRMDLSRQSITLQKTT 969 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLR----EQTKNRIFYLHTHIKKLITRIEFIL 431 +++H++ +++ + + + + A + R + Y + R+E + Sbjct: 970 REKHLKALMQWRKKLLESQWASRDARVTRNRGVAKYHERMLREYSKRKDEDRTKRMEALK 1029 Query: 432 SHKIKSCHTSVSITTRILQ 450 ++ + + + L Sbjct: 1030 NNDVDAYREMLKQQQGQLN 1048 >gi|154338311|ref|XP_001565380.1| actin-interacting protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062429|emb|CAM42290.1| actin-interacting protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1019 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 16/182 (8%), Positives = 56/182 (30%), Gaps = 11/182 (6%) Query: 279 EHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN 338 + + + + L + + + + + Sbjct: 388 ASELCDAVQAVVQEAKYTADMAALRRQHHEQLQLHIEEAQRLQRRLERAQENASFHEDQL 447 Query: 339 LEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK 398 + +H + + L ++ + +++ Q+ E + +Q R ++ Sbjct: 448 RQQRQDDARQHHSEVQA------LQAQLRTAQGELVKAQEDREHLARQLRRSTE--QQTT 499 Query: 399 IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTL 458 + +L EQ K R+ + + ++ R + + +++ + + A + L Sbjct: 500 VEVLRSQVEQLKQRLGEVGADLAQVRGREKQL---TLQAQRERLERAKAEHDAEAAQELL 556 Query: 459 KR 460 +R Sbjct: 557 ER 558 >gi|24112131|ref|NP_706641.1| putative tail length tape measure protein precursor [Shigella flexneri 2a str. 301] gi|24113227|ref|NP_707737.1| putative tail length tape measure protein precursor [Shigella flexneri 2a str. 301] gi|30062248|ref|NP_836419.1| putative tail length tape measure protein precursor [Shigella flexneri 2a str. 2457T] gi|24050964|gb|AAN42348.1| putative tail length tape measure protein precursor [Shigella flexneri 2a str. 301] gi|24052226|gb|AAN43444.1| putative tail length tape measure protein precursor [Shigella flexneri 2a str. 301] gi|30040493|gb|AAP16225.1| putative tail length tape measure protein precursor [Shigella flexneri 2a str. 2457T] gi|281601290|gb|ADA74274.1| putative tail length tape measure protein [Shigella flexneri 2002017] gi|313649553|gb|EFS13983.1| phage tail tape measure protein, lambda family [Shigella flexneri 2a str. 2457T] gi|332757811|gb|EGJ88139.1| phage tail tape measure protein, lambda family [Shigella flexneri K-671] Length = 1013 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 1/155 (0%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 K L ++ + + L + + I RI + Sbjct: 527 QEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNETEAARHQREIARINAMQYADQ 586 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 ++ E +++ + I K E + + Q + +I Sbjct: 587 AVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYSQQQAQVEGQIAAARQSAGIATE 646 Query: 426 RIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 R+ + +S + K+ L R Sbjct: 647 RMTEAHKQLLA-LQQRISDLDGKKLTADEKSVLAR 680 >gi|71420422|ref|XP_811484.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70876153|gb|EAN89633.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 918 Score = 36.7 bits (83), Expect = 9.3, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 8/167 (4%) Query: 295 IIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHII 354 + K + L + + Q + RL EL+ I K + F Sbjct: 291 QLQNEAHDKSKQITVLTSRMQWAQQQAETLKSECSRLVEELKRFQSIHSETKKQLFEAEH 350 Query: 355 NRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIF 414 ++ +++ + K + + + ++ LR + +R + +RI Sbjct: 351 DKSLLQVRCARLEELEVTLRRKSEELIHMEQELLRTTGTLQSCNQETEEAVRRELSSRIA 410 Query: 415 YLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKRG 461 L R ++ ++ R L+ L RG Sbjct: 411 DLQEMRDNAELR-RREKESQLLDAQHQLAELRRQLE-------LARG 449 >gi|293602858|ref|ZP_06685297.1| serine protease HtrA [Achromobacter piechaudii ATCC 43553] gi|292818652|gb|EFF77694.1| serine protease HtrA [Achromobacter piechaudii ATCC 43553] Length = 386 Score = 36.7 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 1/44 (2%) Query: 464 SIQDTNNNFITQKRNLATKTRILINFFDGQAN-AIVINKAPPKE 506 I + + +T + I + DG+ + A V+ P + Sbjct: 115 VIVSQDGHVLTNYHVVQAADAIEVALADGRRDAAKVVGADPDTD 158 >gi|237730367|ref|ZP_04560848.1| exonuclease subunit SbcC [Citrobacter sp. 30_2] gi|226905906|gb|EEH91824.1| exonuclease subunit SbcC [Citrobacter sp. 30_2] Length = 1047 Score = 36.7 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 20/199 (10%), Positives = 46/199 (23%), Gaps = 7/199 (3%) Query: 258 YAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNS 317 A L P A + +++ ++ + RL +A S Sbjct: 279 QLAALSLAQPARALRPHWERIQEQTATIERTRQKIQEVNTRLQSSLALRGCIRQQAHTQS 338 Query: 318 DQTLSCSRYRLDRLPRELEHNLEII-IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEK 376 L+ + D L L + + +++N L+ Sbjct: 339 TAILAEQQTLTDWLNEHDRFRLWSSELAGWKALLAQQSDASAQLRQWQQLRENDTRKLDA 398 Query: 377 QQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK-- 434 Q + L + ++ L +I + +L + Sbjct: 399 LQLPALTLSPQEVTEALAQHVQLRPLRQRLSNLHGQIAPKQKQLAQLRASLMQRQQELTQ 458 Query: 435 ----IKSCHTSVSITTRIL 449 + + L Sbjct: 459 RNAVLAEKRQRYKDKNQQL 477 >gi|194762970|ref|XP_001963607.1| GF20482 [Drosophila ananassae] gi|190629266|gb|EDV44683.1| GF20482 [Drosophila ananassae] Length = 1037 Score = 36.7 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 16/176 (9%) Query: 271 AEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDR 330 + + N E + + K +L Q + R+ + Sbjct: 655 GDRKAYDLNRKKEYKANKERWKRELSMDDSTPKRQRDLTLQSQKDTLKQHEAQEEQRMLQ 714 Query: 331 LPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQ----IVKQ 386 ++ RK H H Q+ R + +K+Q ++Q ++K Sbjct: 715 AQKQYIDLEMRKFKRKRMIMQH----------EHEDQQLRDELSKKEQQLQQAHAMLLKH 764 Query: 387 HLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFIL--SHKIKSCHT 440 H + LE +++ ++ + EQ + + K + RI+ L H ++ Sbjct: 765 HEKTQELEYRQQKSVHQLREEQINKQHDTELHNQKDYMDRIKKELVRKHALELRQQ 820 >gi|187956882|gb|AAI58011.1| Cep110 protein [Mus musculus] Length = 2333 Score = 36.7 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 39/150 (26%), Gaps = 2/150 (1%) Query: 306 TLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHN 365 L N L + + E + + + I Sbjct: 1891 HTTKCQNELLNEQTQLQEDISKWMARLESCQKETETKEQQVQQLQDEIRESKLRLDQQEM 1950 Query: 366 IQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLIT 425 + + Q E+++ + K L + ++++ +Q + + L Sbjct: 1951 MFQKLQKEREREEQKFEAGKVTLEQQQRQLEKELTDQKSRLKQLLTDVSAAEGRLGTLQE 2010 Query: 426 --RIEFILSHKIKSCHTSVSITTRILQSFA 453 R L + +S + L + + Sbjct: 2011 EERRTEGLERMLSQAKQQLSEREQQLMAKS 2040 >gi|119621737|gb|EAX01332.1| dystrobrevin, alpha, isoform CRA_k [Homo sapiens] Length = 399 Score = 36.7 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 17/154 (11%), Positives = 46/154 (29%), Gaps = 10/154 (6%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 N L S + + + + F I ++ RQ I E Sbjct: 75 NPSCMLESSNRLDEEHRLIARYAARLAAESSSSQPPQQRSAPDISFTIDANKQQRQLIAE 134 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQT--KNRIFYLHTHIKKLITRIEFILSH 433 + +I+++ R ++ ++ + L +L R+ + Sbjct: 135 LENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQES 194 Query: 434 KIKSCHTSVSITTRILQS-------FAYKNTLKR 460 + + + ++L++ + +T+ R Sbjct: 195 R-RELMVQLEGLMKLLKTQGAGSPRSSPSHTISR 227 >gi|118091665|ref|XP_421162.2| PREDICTED: similar to kinesin-like protein [Gallus gallus] Length = 4627 Score = 36.7 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 6/147 (4%) Query: 318 DQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQ 377 Q ++ L +E E L+ + ++ +++ H E Sbjct: 4154 QQLYERHMRTIETLRKEREKRLQRYHRSRSLSPQKHLSLLQTVDASHRDLDLPSRRREYL 4213 Query: 378 QHIEQIVKQHLRYIFLEKK--EKIAILHMLREQTKNRIFYLHTHI----KKLITRIEFIL 431 Q + + V ++ R +++ + + + ++ + T I KL R E Sbjct: 4214 QQLRRDVVENTRVQEPKRRSIQYPSEIELMLRDYQKAREETKTEIARARDKLRERAEQEK 4273 Query: 432 SHKIKSCHTSVSITTRILQSFAYKNTL 458 + + L++ A +TL Sbjct: 4274 RRIREQIFAQLQKEEARLKTLASTSTL 4300 >gi|83951312|ref|ZP_00960044.1| periplasmic serine protease, DO/DeqQ family protein [Roseovarius nubinhibens ISM] gi|83836318|gb|EAP75615.1| periplasmic serine protease, DO/DeqQ family protein [Roseovarius nubinhibens ISM] Length = 474 Score = 36.7 bits (83), Expect = 9.4, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Query: 454 YKNT--LKRGYTSIQDTNNNFITQKRNLATKTRILINFFD-GQANAIVINKAPPKE 506 + T L G+ + +T + + I+I F++ G+ A VI P + Sbjct: 81 PRRTSALGSGFVI--SEDGFIVTNNHVIESADEIIIEFYEGGELKAEVIGTDPKTD 134 >gi|326917033|ref|XP_003204809.1| PREDICTED: desmoplakin-like [Meleagris gallopavo] Length = 2829 Score = 36.7 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 16/188 (8%), Positives = 52/188 (27%), Gaps = 9/188 (4%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 A + + L+ +N++ K + +AL S++ Sbjct: 1712 SEVDEKNSAIAELKNQLQTSNKQTLELQGLINDLQKEREKLRQEIEKFQKQALEASNRIQ 1771 Query: 322 SCSRYRLDRLPRELEHNLE-IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 + ++ + + + + ++ N + +Q + Sbjct: 1772 ESKNQYNHIMQERETLLIKMSALEQDKARLQRLEEELN------RLKVNLESESRLKQRL 1825 Query: 381 EQIVKQHLRYIFLEKKE--KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSC 438 E +Q L + K + + + + + ++ I R++ + + Sbjct: 1826 ENEKQQILNDLNQWKSQHSRTEESIRKIQCEREKSEREKNTLRSEIERLQMEIKRIEERY 1885 Query: 439 HTSVSITT 446 + T Sbjct: 1886 RCRLEETA 1893 >gi|255065092|ref|ZP_05316947.1| SMC family protein [Neisseria sicca ATCC 29256] gi|255050513|gb|EET45977.1| SMC family protein [Neisseria sicca ATCC 29256] Length = 1160 Score = 36.7 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ ++ RI Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448 + + RI +++ + + Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353 >gi|195433503|ref|XP_002064750.1| GK15039 [Drosophila willistoni] gi|194160835|gb|EDW75736.1| GK15039 [Drosophila willistoni] Length = 1017 Score = 36.7 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 46/158 (29%), Gaps = 9/158 (5%) Query: 301 KYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSD 360 + + L + L N D + D L R E + +K+ Sbjct: 374 QQTQRSCKDLRQELHNKDLEWTQREQERDHLQRNQLKQSEEKLLEMQMIAQERFQELKAQ 433 Query: 361 FL-----IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFY 415 Q+ + + +++Q L+ +++I L ++ ++ I Sbjct: 434 MAVKEAETKQAQEAYHTEMNHKLNLKQEQLTSAEEKILKLQQRIQNLETQDQELRDEISR 493 Query: 416 LHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFA 453 + + + + V T+ L S + Sbjct: 494 KEKSHASELA----ASAQREEELQQRVRTLTKELSSLS 527 >gi|71422317|ref|XP_812097.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70876837|gb|EAN90246.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 4213 Score = 36.7 bits (83), Expect = 9.5, Method: Composition-based stats. Identities = 12/202 (5%), Positives = 62/202 (30%), Gaps = 25/202 (12%) Query: 251 TDWTLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSL 310 + ++ + P T + ++ ++++ E ++ Sbjct: 310 SPFSAMAFVQYQPVPYRTDLPTSRIELRVDRLRAVLSREEWAIL----RALWREARDGEE 365 Query: 311 LKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNR 370 L + + + D + +++ + R I +++ R Sbjct: 366 YDVLHHFRPVGAEKKRPTDNARAWWAYAIQVTLHR-----------------IRQVRERR 408 Query: 371 QHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + EK + ++ ++++ ++ ++ + + + ++ + I+ Sbjct: 409 VFVWEKYKRLKAAREEYMTLFKRARRRQLEANWLTELTMEEKTRLQDLEMELPMESIK-- 466 Query: 431 LSHKIKSCHTSVSITTRILQSF 452 ++ ++ T + ++ Sbjct: 467 IARRLAYHRTHLER--EQREAL 486 >gi|322491912|emb|CBZ27185.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 1423 Score = 36.7 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 43/164 (26%), Gaps = 6/164 (3%) Query: 297 IRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINR 356 R + L QTL+ + L R E E + Sbjct: 576 ERTQQMHRERQQQTDAQLRQLQQTLAEQQEVLQRTRVAGESADERL------RRTEAALA 629 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 L H ++ R Q I+Q + + + +E L E Sbjct: 630 AVEATLPHAVEGVRARFEALQGLIQQTCVLPVTRVQQDIEEAQRKLQAAEEDRIRLNSSW 689 Query: 417 HTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLKR 460 + + E H + ++ + + + TL+R Sbjct: 690 TQQLAEARQYHEERARHTREVLEQRLAHHKELYEELRTQQTLQR 733 >gi|294670151|ref|ZP_06735076.1| transcriptional regulator, GntR family [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308078|gb|EFE49321.1| transcriptional regulator, GntR family [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 1161 Score = 36.7 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ ++ RI Sbjct: 263 AQVQALNDEVHALQTAEQAQQQSVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448 + + RI +++ + + Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353 >gi|295424207|ref|NP_001035487.2| filamin A-interacting protein 1-like isoform 1 [Mus musculus] Length = 1131 Score = 36.7 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 59/181 (32%), Gaps = 4/181 (2%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + L+ +E I+ + + K + K+ + L RL +L + Sbjct: 150 ESHRRILEQLLMVERSHRQTIMEMEEEKRKHKEYMKKSDEFIN-LLEQECERLKKLIDQE 208 Query: 336 EHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEK 395 + E K + + + + + Q L Q +++ Q L E Sbjct: 209 TASQEKKEQEKEKRIKTLKEELTKLKSFALMVVDEQQRLTAQLALQRQKIQALTTSAKET 268 Query: 396 KEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI---LSHKIKSCHTSVSITTRILQSF 452 + K+A+ ++ + + L ++ T + K+ + + + L + Sbjct: 269 QGKLALAEARAQEEEQKATRLEKELQTQTTEFHQNQDKIMAKLTNEDSQNRQLRQKLAAL 328 Query: 453 A 453 + Sbjct: 329 S 329 >gi|169796920|ref|YP_001714713.1| ATP-dependent dsDNA exonuclease (suppression of recBC) [Acinetobacter baumannii AYE] gi|213156677|ref|YP_002318338.1| ATP-dependent dsDNA exonuclease [Acinetobacter baumannii AB0057] gi|215484382|ref|YP_002326613.1| Exonuclease sbcC [Acinetobacter baumannii AB307-0294] gi|301345280|ref|ZP_07226021.1| Exonuclease sbcC [Acinetobacter baumannii AB056] gi|301595731|ref|ZP_07240739.1| Exonuclease sbcC [Acinetobacter baumannii AB059] gi|332853755|ref|ZP_08434967.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013150] gi|332871125|ref|ZP_08439723.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013113] gi|169149847|emb|CAM87738.1| ATP-dependent dsDNA exonuclease (Suppression of recBC) [Acinetobacter baumannii AYE] gi|213055837|gb|ACJ40739.1| ATP-dependent dsDNA exonuclease [Acinetobacter baumannii AB0057] gi|213988948|gb|ACJ59247.1| Exonuclease sbcC [Acinetobacter baumannii AB307-0294] gi|332728441|gb|EGJ59816.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013150] gi|332731711|gb|EGJ62992.1| exonuclease SbcCD, C subunit [Acinetobacter baumannii 6013113] Length = 1198 Score = 36.7 bits (83), Expect = 9.6, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 4/203 (1%) Query: 260 ADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQ 319 A +A + T A+ Q ++ + +K +L + K + DQ Sbjct: 764 AWQQASSQTAKQTWAILDARAKQLEQQEQLSQRFEQQQQELKMLTASLEQMTKQIDEIDQ 823 Query: 320 TLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNH--IINRIKSDFLIHNIQKNRQHILEKQ 377 L + + + ++ + R + I + K + +Q + + Sbjct: 824 NLQEITLKGQQNNEKAVSLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTR 883 Query: 378 QHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 QH EQ + + + L Q +N + +T + I S + + Sbjct: 884 QHFEQQKQALDQLKHQY-QHTEQHQQQLDGQIQNWLKDHTDFQASDLTALIQINSAQEQD 942 Query: 438 CHTSVSITTRIL-QSFAYKNTLK 459 ++ R+L ++ + T++ Sbjct: 943 IRNRLNHAERLLSEASSALKTMQ 965 >gi|322388178|ref|ZP_08061782.1| DNA-directed DNA polymerase III alpha subunit [Streptococcus infantis ATCC 700779] gi|321140850|gb|EFX36351.1| DNA-directed DNA polymerase III alpha subunit [Streptococcus infantis ATCC 700779] Length = 1033 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 14/102 (13%) Query: 13 PEYSVSELSYHLKHIVESNLSHVCVRGEISGYRG-IHSSG--HAYFSLKDNHSRIDAIIW 69 P S+SELS E + V V EI R G A+ + D+ + ++ ++ Sbjct: 874 PIVSLSELS-------EGQTATVLV--EIQSIRVIRTKKGENMAFLKVTDSKTSLEVTVF 924 Query: 70 KGTLNKIEFLPEEGIEFLVIGKITTFPGSSKYQIIIESLIPS 111 + + L EG + + GK+ + Q+++ +L + Sbjct: 925 SEQYRQFKNLLHEGSFYYLNGKVQ--ARDGRLQLVLNNLKEA 964 >gi|296203220|ref|XP_002806923.1| PREDICTED: LOW QUALITY PROTEIN: fas-binding factor 1-like [Callithrix jacchus] Length = 1172 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 20/173 (11%), Positives = 50/173 (28%), Gaps = 20/173 (11%) Query: 290 ARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRH 349 AR + + + + L + Q RL L R + + + Sbjct: 694 ARYLSHCQEAEQARAELTAQYQRRLAAAAQEKDQEMERLRELQRASILEMRRDHEEQLQR 753 Query: 350 FNHI------------INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKE 397 + + + +IH ++K + E +E + + L ++ Sbjct: 754 LKLLKDREVDAATSTTSHTWSLNSIIHQMEKFSSSLQELSYRMEASHLTNSQERELGIRQ 813 Query: 398 KIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + L L+E+ + + I +S +++L+ Sbjct: 814 RDEQLRALQERLGQQQRDMEEERSWQQE--------VIGKMEARLSEQSQLLE 858 >gi|149724128|ref|XP_001504248.1| PREDICTED: myosin XVIIIA isoform 3 [Equus caballus] Length = 1581 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 16/195 (8%), Positives = 61/195 (31%), Gaps = 5/195 (2%) Query: 255 LADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKAL 314 + D+ + A + + + + I + +I+ + AL Sbjct: 1213 MLDHLKNNAPSKREIAQLKNQLEESEFTCAAAVKARKAMEVEIEDLHLQIDDIAKAKTAL 1272 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF-LIHNIQKNRQHI 373 L + + E + ++ ++ + + L +++ + Sbjct: 1273 EEQLSRLQREKNEIQNRLEEDQEDMNELMKKHKAAVAQASRDLAQMNDLQAQLEEANKEK 1332 Query: 374 LEKQQHIEQIV-KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT---HIKKLITRIEF 429 E Q+ ++ + + + K ++ + + R+ + T ++ L +R++ Sbjct: 1333 QELQEKLQTLQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLASRLKE 1392 Query: 430 ILSHKIKSCHTSVSI 444 + + ++ Sbjct: 1393 NMEKLTEERDQRIAA 1407 >gi|119491437|ref|ZP_01623456.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106] gi|119453432|gb|EAW34595.1| hypothetical protein L8106_14260 [Lyngbya sp. PCC 8106] Length = 688 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 61/178 (34%), Gaps = 8/178 (4%) Query: 265 PTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCS 324 P + + + + + ++ L + LS Sbjct: 348 PNREEVESWLGKAGVADVEETAIRMSTQVDEMEKRVPEFWQKVDQQQANLNQNRTELSRI 407 Query: 325 RYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIV 384 +LD L ++L + + I + + + +I + L N+Q I Q + Q+ Sbjct: 408 ETQLDDLKKKLRNYPDEDIQELQKRLDEVETKINN--LNRETGSNQQQIENTQSSVSQLE 465 Query: 385 KQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 +Q + E K+ +A ++ + T + ++ R++ +++S ++ Sbjct: 466 RQIDKLKMNEMKQVLA------QRRIEKTQDAITRLTQVKDRLDQQFRSQLESRVQNI 517 >gi|73954769|ref|XP_862078.1| PREDICTED: similar to DIX domain containing 1 isoform 3 [Canis familiaris] Length = 683 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 23/238 (9%), Positives = 70/238 (29%), Gaps = 13/238 (5%) Query: 228 NDEMIVRAIANSSIPIISAIGHETDWTLAD--YAADLRAPTPTGAAEMAVPVKEHLQSSL 285 ++ +I ++ + II + G E D ++ D R +P E + + Q Sbjct: 231 SESIITQSEEKADFVIIPSEGIENRTEETDSPFSRDWRPGSPGTYLETSWEEQLLEQQEH 290 Query: 286 INLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFR 345 + E +I ++ + + ++L ++ + + Sbjct: 291 LEKEMEEAKKMISGLQALLLNGSLPEDEQERPLALCEPGVNPEEQL-----IIIQSRLDQ 345 Query: 346 KYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHML 405 + + + + QQ + Q L+ + + + Sbjct: 346 SMEENQDLKKELLKCKQEARNLQGIK--DALQQRLTQQDTSVLQLKQELLRANMDKDELH 403 Query: 406 REQ--TKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNT-LKR 460 + + ++ + + + + ++ + R L +Y+ L+R Sbjct: 404 NQNVDLQRKLDERNRLLGEYKKELGQK-ERLLQQHQVKLEEALRKLSEASYQQVDLER 460 >gi|47216359|emb|CAG02417.1| unnamed protein product [Tetraodon nigroviridis] Length = 1342 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 16/183 (8%), Positives = 50/183 (27%), Gaps = 4/183 (2%) Query: 272 EMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRL 331 ++ + + + ++ L + L ++Q L + + + L Sbjct: 285 YLSAQRESTTVHDINDKLENELANKEAFLRQMEEKNRQLQERLELAEQKLQQTMRKAETL 344 Query: 332 PRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYI 391 P + I H + L +++ Q +L R+ Sbjct: 345 PEVEAELAQRIAALTKAEERHGSIEERMRHLECQLEEKNQELLRVSH--GGGGSTVSRFG 402 Query: 392 FLEKKEKIAILHMLREQTKNRIFYLHTHI-KKLITRIEFILSHKIKSCHTSVS-ITTRIL 449 K+ +A L + + + ++ R+ + + + + + Sbjct: 403 SSRKRRTLASSTWLLTRLSDPQARQREKMNEEHNKRLSDTVDRLLNESNERLQLHLKERM 462 Query: 450 QSF 452 + Sbjct: 463 AAL 465 >gi|326666190|ref|XP_003198208.1| PREDICTED: tripartite motif-containing protein 16 isoform 1 [Danio rerio] Length = 548 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 24/202 (11%), Positives = 52/202 (25%), Gaps = 8/202 (3%) Query: 257 DYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYK--INTLNSLLKAL 314 D D T A + + E + ++ + K Sbjct: 93 DVQCDACTGTKYKAIKSCLQCLESYCQTHFERHEEFHSRKPHKVIDATGRLQDMICPKHE 152 Query: 315 PNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHIL 374 + + + L +E EH + + ++ + + RQ L Sbjct: 153 KELEVYCITDQQCICELCKEYEHKNHATVSAVAQRTEKQKELKETLVKLQERLQQRQKDL 212 Query: 375 EKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHK 434 Q + V+ H + ++ I L + R L I+ I Sbjct: 213 ---QQLRAAVESHKQSAQTAVEDTERIFTELICSIEKRRSELTQMIRDQEKTIRSRAERH 269 Query: 435 IKSCHTSVSITTRI---LQSFA 453 ++ + R L+ + Sbjct: 270 MEQLEQEIEDLRRRNTELEQLS 291 >gi|159127797|gb|EDP52912.1| cohesin complex subunit (Psm1), putative [Aspergillus fumigatus A1163] Length = 1289 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 18/171 (10%), Positives = 55/171 (32%), Gaps = 3/171 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + R +K K L+ + + L + + L+ L + + + E Sbjct: 742 LEQRLAYAQEELKALERNLKSKRTELDFVKRQLEDLRPKYMERQEALEELDQTIAQSQES 801 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR--YIFLEKKEKI 399 + + + R+ + + E Q + Q R +++++ Sbjct: 802 VSRIEDEIYRKFCKRLGYANIREYEVQQGSLQEEAAQKKLEFTTQKSRIENQLSFERQRL 861 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + + + IK+L + + +++ + + + LQ Sbjct: 862 QATNDRIASLQAQHGRDQSLIKELKAE-QEQIRNQLDEYNAELDVLRERLQ 911 >gi|145534185|ref|XP_001452837.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420536|emb|CAK85440.1| unnamed protein product [Paramecium tetraurelia] Length = 579 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 25/185 (13%), Positives = 67/185 (36%), Gaps = 7/185 (3%) Query: 276 PVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPREL 335 + + + LE + K + LK Q L SR RL+ L + Sbjct: 289 EELKRSREKIEQLEELRQSRERLQDLKKSREVQEALKNSGEKIQDLQKSRERLEELKKSR 348 Query: 336 EHNLE----IIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQH---IEQIVKQHL 388 E + ++ + + I ++K+R+ + + ++ ++Q+ ++ Sbjct: 349 ERLNQLEELRKSRQQMEELEELKKSRERQAQIDELKKSRERLEDLRKSRETLQQLEQERK 408 Query: 389 RYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRI 448 + +++++K ++ + RI L T+ + L + + +K +S + Sbjct: 409 NHEKIDEQKKSRERIEELQKQRKRIEELRTYQEALEFQKKEREELDLKRSQERLSELKKS 468 Query: 449 LQSFA 453 + Sbjct: 469 RERLD 473 >gi|153212272|ref|ZP_01948060.1| GGDEF family protein [Vibrio cholerae 1587] gi|124116650|gb|EAY35470.1| GGDEF family protein [Vibrio cholerae 1587] Length = 372 Score = 36.7 bits (83), Expect = 9.7, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 7/138 (5%) Query: 316 NSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILE 375 + ++ + R + + ++ + +I+ + L + RQ I Sbjct: 76 HLEEHIQVHRTFMSEVFSMQAFIHDVDDRSAVQLLEFLIHWLAYHILGIDQNMARQVIA- 134 Query: 376 KQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKI 435 + E++EK A L + ++L+ + L K+ Sbjct: 135 -----IRSGMSAEEAYAKEEREKNAATEPLLNALNALFDQVSERNRELVK-LNQSLEEKV 188 Query: 436 KSCHTSVSITTRILQSFA 453 + R L++ + Sbjct: 189 IERTQQLYQVNRQLEALS 206 >gi|220935429|ref|YP_002514328.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996739|gb|ACL73341.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 427 Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 49/152 (32%), Gaps = 2/152 (1%) Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKS 359 + +++ L +TL ++ L +++ L + + + ++ Sbjct: 96 REQLQQSVDQSQAELRQQAETLEAHLLQIASLQEDID-ALRRLREDLESQVGRLASELEE 154 Query: 360 DFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTH 419 ++R LE + Q + ++ +I L E+ + + Sbjct: 155 SQASAGQLRDRSRALEARLAETQETTLLAQREIEAREIRIQDLAAGIEERDRALVEERSL 214 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQS 451 R++ L +++ ++ L++ Sbjct: 215 TADAQARVD-ALRRQMQDLEQQLARLNETLRA 245 >gi|170043308|ref|XP_001849335.1| structural maintenance of chromosomes protein 6 [Culex quinquefasciatus] gi|167866691|gb|EDS30074.1| structural maintenance of chromosomes protein 6 [Culex quinquefasciatus] Length = 1121 Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 19/182 (10%), Positives = 60/182 (32%), Gaps = 3/182 (1%) Query: 273 MAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP 332 +A +LQ ++ L+ ++ RL + + + + + +L Sbjct: 700 LAKKPARYLQVNMGELKKETQRLLERLEHELRQLNQKIEQETREHGEKQRALQEKQKQLS 759 Query: 333 RELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIF 392 ++ + + ++ L + + + + + +Q +EQ ++ ++ Sbjct: 760 KQQIELNGLELKINQLKAIEYPAELEDVTLQNELAELKASQAQLKQELEQENEKIQTFMS 819 Query: 393 --LEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 ++ I + I L I + + + + K+ H +S L+ Sbjct: 820 EIQAQERNIQEKKDNMGVIEREIQQLQDKIDEEQQK-KHDMQANAKTKHQQLSRLQEELK 878 Query: 451 SF 452 + Sbjct: 879 AL 880 >gi|148693806|gb|EDL25753.1| DIX domain containing 1, isoform CRA_b [Mus musculus] Length = 713 Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 15/185 (8%) Query: 284 SLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLP-----RELEHN 338 LEA ++ ++ + K + L D E N Sbjct: 282 RGTYLEATWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPVALCEPGVN 341 Query: 339 LEIIIFRKYRHFNHI--INRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKK 396 E + + N+ D L + + +L+ +Q + + Sbjct: 342 PEEQLIIIRSRLDQSVEENQDLKDALQQRLTQQDTSVLQLKQELLRANMDKDELHNQNVD 401 Query: 397 EKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN 456 + + R + ++ R+ + + R L +Y+ Sbjct: 402 LQRKLEERNRLLGEYKVRNALQKELGQKDRL-------FQQQQAKLEEALRKLSDASYQQ 454 Query: 457 T-LKR 460 L+R Sbjct: 455 VDLER 459 >gi|146088120|ref|XP_001465995.1| hypothetical protein [Leishmania infantum JPCM5] Length = 963 Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 18/220 (8%), Positives = 58/220 (26%), Gaps = 10/220 (4%) Query: 245 SAIGHETDW---TLADYAADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIK 301 +A+ HET + AD++ + V + + + Sbjct: 97 AAVAHETLTEAVSPVGATADVQMVAELKSELYHVSRSLVQARQQARTSEETCAELRQRCQ 156 Query: 302 YKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDF 361 L + + + L + + + RE ++ ++ Sbjct: 157 GLETEKQGLRLEVQEAQERLQARQAQTEEQRREAAEAKLTVLSLTAERDELSAKVQEAWD 216 Query: 362 LIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEK--IAILHMLREQTKNRIFYLHTH 419 + + + + Q ++ + L ++ + + ++ Sbjct: 217 RVAELSTALRQQETEVQRLQTGMTAAQHSKELTAQQHSHVEQQLRILQEQLRVHETDEHA 276 Query: 420 IKKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKNTLK 459 R+ L ++ +S ++ Y+ +L Sbjct: 277 SAAARQRLSAALQRALERLAELLSNV-----AYDYQRSLA 311 >gi|119907034|ref|XP_615064.3| PREDICTED: DIX domain containing 1 [Bos taurus] Length = 731 Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 21/201 (10%), Positives = 60/201 (29%), Gaps = 7/201 (3%) Query: 261 DLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQT 320 D R +P E + + Q + E +I ++ + + Sbjct: 314 DWRPGSPRTYLETSWEEQLLEQQEHLEKEMEEAKKMISGLQALLLNGSLPEDEQERPLAL 373 Query: 321 LSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHI 380 ++L + I + + + ++ L +Q + ++ + Sbjct: 374 CEPGVNPEEQLIIIQSRLDQSIEENQDLKKELLKYKQEARNLQGIKDALQQRLTQQDASV 433 Query: 381 EQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHT 440 Q+ ++ LR + + LH + ++ + + + + + Sbjct: 434 LQLKQELLRANMDKDE-----LHNQNVDLQRKLEERNRLLGEYKKELGQK-DRLLLQNQA 487 Query: 441 SVSITTRILQSFAYKNT-LKR 460 + R L +Y+ L+R Sbjct: 488 KLEEALRKLSEASYQQVDLER 508 >gi|115401012|ref|XP_001216094.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114190035|gb|EAU31735.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 278 Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 49/175 (28%), Gaps = 37/175 (21%) Query: 363 IHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNR--IFYLHTHI 420 IH + + + H+ + + R EK I+ + E + R I Sbjct: 52 IHMNATKWKSLTQFAAHLGR--EGLCRVEETEKGLFISYIDRSPETLRRREAIMKKERQD 109 Query: 421 KKLITRIEFILSHKIKSCHTSVSITTRILQSFAYKN-TLKRGYTSIQDTNNNFITQKRNL 479 + R + ++ +++ + + L+R Sbjct: 110 RGDEEREQRLIQEQVERAQQRKDPAEE--EEVDPEAKILQR------------------- 148 Query: 480 ATKTRILINFF---------DGQANAIVINKAPPKEQPTKKCQLHNNKREKQGTQ 525 ++ +N +G+A A +K+P E E TQ Sbjct: 149 KEGEKVKLNLGFGKKTEGQPEGEAKAESKSKSP--EASAAPGATPEAASETPPTQ 201 >gi|149210881|ref|XP_001522815.1| hypothetical protein MGCH7_ch7g913 [Magnaporthe oryzae 70-15] gi|86196868|gb|EAQ71506.1| hypothetical protein MGCH7_ch7g913 [Magnaporthe oryzae 70-15] Length = 419 Score = 36.7 bits (83), Expect = 9.8, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 38/141 (26%), Gaps = 5/141 (3%) Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 R + ++ + + Q +R + + R+ ++++ H Sbjct: 109 HDDRSAGPHQGSNLSNFYASQRQQPSRGTNEAEQMMQAKRRMAAQRERELRNYHQEQQYN 168 Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + TL G +D I ++R+ F DG V + Sbjct: 169 RTSISDVRPDRTLSPGSNMSEDERRELIARQRSALYGEG---QFADG--GGYVDETGAVR 223 Query: 506 EQPTKKCQLHNNKREKQGTQG 526 + Q + G Sbjct: 224 PGMPGQPQHPSQTIAPPPMGG 244 >gi|224825444|ref|ZP_03698549.1| SMC domain protein [Lutiella nitroferrum 2002] gi|224602365|gb|EEG08543.1| SMC domain protein [Lutiella nitroferrum 2002] Length = 1140 Score = 36.7 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 20/197 (10%), Positives = 55/197 (27%), Gaps = 4/197 (2%) Query: 259 AADLRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSD 318 D + A A + S E + ++ + L + + Sbjct: 351 VQDELQASQAWLARHAHFAGLGEKLSGWQSEYGQIQQAQQAVQQLQTQQQAQQGELADIE 410 Query: 319 QTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQ 378 L+ L + E + R ++ L + Q+ ++ + +Q Sbjct: 411 TRLARQVQALQQATARHEQS-RQATQEAERQAAALLQGQTLAGLRDSWQRMQEQLQAWRQ 469 Query: 379 HIEQIVKQHLRYIFLEKKEK-IAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKS 437 +Q + ++E +A H + + + L ++L +++ K+ Sbjct: 470 LAQQATQLRQLAAQRVQQETSLADTHQQLAEQQTGLDALRRDYRQLKEQVDD--KRKLLL 527 Query: 438 CHTSVSITTRILQSFAY 454 + + Sbjct: 528 QEQRIQSLEAHRAALQP 544 >gi|145609634|ref|XP_367033.2| hypothetical protein MGG_03109 [Magnaporthe oryzae 70-15] gi|145017037|gb|EDK01400.1| hypothetical protein MGG_03109 [Magnaporthe oryzae 70-15] Length = 395 Score = 36.7 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 38/141 (26%), Gaps = 5/141 (3%) Query: 386 QHLRYIFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSIT 445 R + ++ + + Q +R + + R+ ++++ H Sbjct: 85 HDDRSAGPHQGSNLSNFYASQRQQPSRGTNEAEQMMQAKRRMAAQRERELRNYHQEQQYN 144 Query: 446 TRILQSFAYKNTLKRGYTSIQDTNNNFITQKRNLATKTRILINFFDGQANAIVINKAPPK 505 + TL G +D I ++R+ F DG V + Sbjct: 145 RTSISDVRPDRTLSPGSNMSEDERRELIARQRSALYGEG---QFADG--GGYVDETGAVR 199 Query: 506 EQPTKKCQLHNNKREKQGTQG 526 + Q + G Sbjct: 200 PGMPGQPQHPSQTIAPPPMGG 220 >gi|26332288|dbj|BAC29874.1| unnamed protein product [Mus musculus] Length = 585 Score = 36.7 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 3/160 (1%) Query: 283 SSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEII 342 +E RL K L L + ++ + L+ Sbjct: 265 QQKQTIERLEQEHTNRLRDEAKRIKGEQEKELSKFQNVLKNRKKEEQEFVQKQQQELDGS 324 Query: 343 IFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAIL 402 + + + + I+ + L + Q R + E+ +++ + + + K++ Sbjct: 325 LKKIIQQQKAELANIERECLNNKQQLMRAREAAIWELEERHLQEKHQLLKQQLKDQ---Y 381 Query: 403 HMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 M R Q R +++ R+ L ++ + Sbjct: 382 FMQRHQLLKRHEKETEQMQRYNQRLIEELKNRQTQERARL 421 >gi|71000142|ref|XP_754788.1| cohesin complex subunit (Psm1) [Aspergillus fumigatus Af293] gi|66852425|gb|EAL92750.1| cohesin complex subunit (Psm1), putative [Aspergillus fumigatus Af293] Length = 1289 Score = 36.7 bits (83), Expect = 9.9, Method: Composition-based stats. Identities = 18/171 (10%), Positives = 55/171 (32%), Gaps = 3/171 (1%) Query: 282 QSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEI 341 + + R +K K L+ + + L + + L+ L + + + E Sbjct: 742 LEQRLAYAQEELKALERNLKSKRTELDFVKRQLEDLRPKYMERQEALEELDQTIAQSQES 801 Query: 342 IIFRKYRHFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLR--YIFLEKKEKI 399 + + + R+ + + E Q + Q R +++++ Sbjct: 802 VSRIEDEIYRKFCKRLGYANIREYEVQQGSLQEEAAQKKLEFTTQKSRIENQLSFERQRL 861 Query: 400 AILHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSVSITTRILQ 450 + + + + IK+L + + +++ + + + LQ Sbjct: 862 QATNDRIASLQAQHGRDQSLIKELKAE-QEQIRNQLDEYNAELDVLRERLQ 911 >gi|325143894|gb|EGC66206.1| chromosome segregation protein SMC [Neisseria meningitidis M01-240013] Length = 1161 Score = 36.7 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ ++ RI Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448 + + RI +++ + + Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353 >gi|319897025|ref|YP_004135220.1| cell division protein mukb [Haemophilus influenzae F3031] gi|317432529|emb|CBY80889.1| cell division protein MukB [Haemophilus influenzae F3031] Length = 1510 Score = 36.7 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 50/158 (31%), Gaps = 9/158 (5%) Query: 300 IKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHN---LEIIIFRKYRHFNHIINR 356 K + L L +Q + + + L + L+ + H Sbjct: 548 QKLQAQQTPQLRTKLHELEQRYAQQQSAVKLLNDFNQRANLSLQTAEELEDYHAEQEALI 607 Query: 357 IKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYL 416 + +NR + +K++++ + ++ R + A L L +Q+ R Sbjct: 608 EDISARLSEQVENRSTLRQKRENLTALYDENARKAPAWLTAQAA-LERLEQQSGERFENS 666 Query: 417 HTHIKKLITRI----EFILSH-KIKSCHTSVSITTRIL 449 + + +++ E + +++ + L Sbjct: 667 QDVMNFMQSQLVKERELTMQRDQLEQKRLQLDEQISRL 704 >gi|308388730|gb|ADO31050.1| hypothetical protein NMBB_0592 [Neisseria meningitidis alpha710] Length = 1161 Score = 36.7 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 13/151 (8%), Positives = 41/151 (27%), Gaps = 1/151 (0%) Query: 299 LIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIK 358 K+ + + L+ + LD + +++ + Sbjct: 203 RQVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETA 262 Query: 359 SDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLHT 418 + N + + E+ Q + R + E+ ++ ++ RI Sbjct: 263 AQVQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQ 322 Query: 419 HIKKLITRIEFILSH-KIKSCHTSVSITTRI 448 + + RI +++ + + Sbjct: 323 AAQAQMQRIHQEQQQIRVQLEENELQAEEKQ 353 >gi|213626315|gb|AAI71335.1| hgs protein [Xenopus (Silurana) tropicalis] Length = 750 Score = 36.7 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 13/155 (8%), Positives = 38/155 (24%), Gaps = 7/155 (4%) Query: 303 KINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFL 362 + + + L R + + + I + Sbjct: 370 MEQQYQNGESEENHEQFLKALQNAVTTFLNRMKSNQMRGRSITNDSAVLSLFQSINNMHP 429 Query: 363 I-----HNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAILHMLREQTKNRIFYLH 417 + + + R + Q + QI L + + + E + R L Sbjct: 430 QLLEMLNQLDERRLYYEGLQDKLAQIRDARGALNALRDEHREKLRRAAEEAERQRQIQLA 489 Query: 418 THIKKLITRIEFI--LSHKIKSCHTSVSITTRILQ 450 ++ + + + + ++ R L+ Sbjct: 490 QKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQLR 524 >gi|126290827|ref|XP_001370458.1| PREDICTED: similar to protein kinase isoform 1 [Monodelphis domestica] Length = 982 Score = 36.7 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 15/162 (9%), Positives = 53/162 (32%), Gaps = 9/162 (5%) Query: 289 EARLNNIIIRLIKYKINTLNSLLKALPNSDQTLSCSRYRLDRLPRELEHNLEIIIFRKYR 348 + R +K K + + ++ LP + R +++ ++ + + + ++ Sbjct: 660 QDREYTKFQEQLKMKKKEVKNEVEKLPRQQRK-ESMRQKMEEHTQQKQLLDKEFVAKQKG 718 Query: 349 HFNHIINRIKSDFLIHNIQKNRQHILEKQQHIEQIVKQHLRYIFLEKKEKIAI------- 401 + I ++ K R+ + +KQ+ + +E+ + Sbjct: 719 DLELAMKTITAENRREICDKERECLNKKQELLRDREASLWELEEHHLQERHQLVKQQLKD 778 Query: 402 -LHMLREQTKNRIFYLHTHIKKLITRIEFILSHKIKSCHTSV 442 + R + + +++ R+ L + + + Sbjct: 779 QYFLQRHELLRKHEKEREQMQRYNQRMIEQLKIRQQQEKARL 820 >gi|71661404|ref|XP_817723.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70882933|gb|EAN95872.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 748 Score = 36.7 bits (83), Expect = 10.0, Method: Composition-based stats. Identities = 20/200 (10%), Positives = 48/200 (24%), Gaps = 11/200 (5%) Query: 262 LRAPTPTGAAEMAVPVKEHLQSSLINLEARLNNIIIRLIKYKINTLNSLLKALPNSDQTL 321 P + V + R I+R +I + L + Sbjct: 289 KHLPNMELCILKILAVLRGFHCRVEIAWQRKRMHILRRFFLRIVWKKREQRRLKCLREEW 348 Query: 322 SCSRYRLDRLPRELEHNLEIIIFRKYRHFNHIINRIKSDFLIHNIQK---NRQHILEKQQ 378 SR R L+ L I + + + + + ++F + Q R + + Sbjct: 349 QGSRMLRRRREEVLDAVLRIQCAARRWLASRVRSVLWAEFQRKHHQACVIQRTYRRHVGR 408 Query: 379 HIEQIVKQHLRY--------IFLEKKEKIAILHMLREQTKNRIFYLHTHIKKLITRIEFI 430 + +K+ R + + + + Sbjct: 409 RWIRALKEEARLEEEKRMVGQIIHYSASKIQATWRMYSERRSQAEYLRFLLWERHILSSR 468 Query: 431 LSHKIKSCHTSVSITTRILQ 450 + ++ + R L Sbjct: 469 IQRAWRAHRARLQSHWRRLH 488 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.312 0.127 0.342 Lambda K H 0.267 0.0389 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,471,089,579 Number of Sequences: 14124377 Number of extensions: 184681094 Number of successful extensions: 778264 Number of sequences better than 10.0: 10000 Number of HSP's better than 10.0 without gapping: 5007 Number of HSP's successfully gapped in prelim test: 5796 Number of HSP's that attempted gapping in prelim test: 745009 Number of HSP's gapped (non-prelim): 26906 length of query: 529 length of database: 4,842,793,630 effective HSP length: 144 effective length of query: 385 effective length of database: 2,808,883,342 effective search space: 1081420086670 effective search space used: 1081420086670 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 83 (36.7 bits)