HHsearch alignment for GI: 254780793 and conserved domain: COG0534

>COG0534 NorM Na+-driven multidrug efflux pump [Defense mechanisms].
Probab=100.00  E-value=3.3e-43  Score=244.60  Aligned_cols=420  Identities=15%  Similarity=0.143  Sum_probs=351.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf             13688999999999999999999999999957775789999999978999999975778999999999998448978999
Q gi|254780793|r    2 KIIRNFLTVCASTLGSRFLGFIRETLVAATLGVGKVTDVFYVAFYLTFIFRRLAAEGIFHNSFIPLFSQEKENNGSESAQ   81 (518)
Q Consensus         2 ~~~k~~~~~~~~~~~skilG~~r~~~~a~~~G~~~~~da~~~a~~i~~~~~~l~~~G~~~~a~ip~~~~~~~~~~~~~~~   81 (518)
T Consensus        18 ~l~~la~P~i~~~l~~~l~~~vD~~~vG~~-~-~~alaav~la~~i~~~~~~~~~--gl~~g~~~liaq~~Ga~~~~~~~   93 (455)
T COG0534          18 LLLKLAIPIILGNLLQTLYGLVDTFMVGHL-G-AEALAAVGLANPIFFLIIAIFI--GLGTGTTVLVAQAIGAGDRKKAK   93 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCHHHHH
T ss_conf             999999999999999999999999999965-0-8999999999999999999999--99999999999997499889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
Q ss_conf             99999999999999999999999653434445788754101111245655444332124688876568899884222799
Q gi|254780793|r   82 RLSSEIFSILILSLVVLTVVVELILPLLIRFIIAPGFADQSDKYFLTIQLSRVMFPSIIFISLASLVTGMLFALGRYFIA  161 (518)
Q Consensus        82 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~a~g~~~~~~~~~la~~~~~i~~p~~~~~~~~~~~~~~l~~~~~f~~~  161 (518)
T Consensus        94 ~~~~~~~~~~~~l~~~~~~~~~~~~~~ll~~l~~~-----~~v~~~a~~Yl~i~~~~~~~~~~~~~~~~~lr~~G~~~~~  168 (455)
T COG0534          94 RVLGQGLLLALLLGLLLAILLLFFAEPLLRLLGAP-----AEVLELAAEYLRIILLGAPFALLSFVLSGILRGLGDTKTP  168 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf             99999999999999999999999699999985997-----6799999999999999999999999999999858991487


Q ss_pred             HHHHHHHHCHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHCCCC---CC-CCCCCCCCCCCCHHHHHH
Q ss_conf             99998540103467777623568654432000122111011100023101210365---44-456775432410001346
Q gi|254780793|r  162 SIAPIVINVFPIFALTYALWHPSSPQETTYLLAWGVFLSNVVHFWIVYCCAKNDGV---KL-RFQYPRLTHNVKFFLKLT  237 (518)
Q Consensus       162 a~~~vi~ni~~i~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~k~~l~~~  237 (518)
T Consensus       169 m~~~~~~~~lNi~Ln~llI~g~~g~-lGv~GAA~AT~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lG  247 (455)
T COG0534         169 MYILLLGNLLNIVLNYLLIFGLFGG-LGVAGAALATVIARWIGALLLLIYLLRKKRLLSLFKKKLLKPDRKLLKEILRLG  247 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCH-HCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHC
T ss_conf             9999999999999979999951312-122209999999999999999999996343003554201479999999999966


Q ss_pred             HHHHHHHHHCCCHHHH-HCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             8887643201202333-202556556630577775332110000001112322100234444332236789998975411
Q gi|254780793|r  238 FPLMVTGGIIQISNIV-GRAIASRETGIISAIQYAERIYSLPVGVIGGAMMIVILPALSRSLRSKNKQKSFELQNQAIEC  316 (518)
Q Consensus       238 ~p~~l~~~~~~i~~~i-~~~~as~~~g~vs~~~~a~~l~~l~~~i~~~ai~~~~~P~ls~~~~~~d~~~~~~~~~~~~~~  316 (518)
T Consensus       248 ~p~~~~~~~~~~~~~~~~~~~~~~G~~~lAa~~i~~~i~~~~~-~~~~gi~~a~~~lvG~~~Ga~~~~~a~~~~~~~~~~  326 (455)
T COG0534         248 LPIFLESLSESLGFLLLTLFVARLGTVALAAYGIALRIASFIF-MPPFGIAQAVTILVGQNLGAGNYKRARRAARLALKL  326 (455)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             4699999999999999999999759899999999999999999-999999999999999987799999999999999999


Q ss_pred             CCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf             344215899999852572311121047864455456666555420105677531232023544331013467778886-8
Q gi|254780793|r  317 ISFFGIPSAVALFMLSKEIVQTLYERGAFSSQNTILVSSFLSIYSIGILANILSKSLSTAFYAQNDMKAPMKFTIVSI-A  395 (518)
Q Consensus       317 ~~~i~~p~~~~l~~~~~~ii~llf~~g~F~~~~~~~~~~~L~~~~~~~~~~~~~~i~~~~~~a~g~~~~~~~~~~~~~-~  395 (518)
T Consensus       327 ~~~~~~~~~~i~~~~~~~i~~lf~~----~~~v~~~~~~~l~i~~~~~~~~~~~~~~~g~lrg~g~~~~~~~~~~~~~~~  402 (455)
T COG0534         327 SLLIALLIALLLLLFREPIISLFTT----DPEVIALAVILLLIAALFQPFDGIQFVLSGVLRGAGDAKIPFIISLLSYWG  402 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             9999999999999989999999789----499999999999999999999999999999975258719989999999999


Q ss_pred             HHHHHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999998752021-12004999999999999999999999711
Q gi|254780793|r  396 INLTIAIGSFPF-IGGYGIALAEVSSSWVNTICLAITLLKRK  436 (518)
Q Consensus       396 vni~l~~~li~~-~G~~G~a~at~i~~~~~~~~~~~~l~k~~  436 (518)
T Consensus       403 ~~lp~~~~l~~~~~g~~Gvw~~~~~~~~~~~~~~~~~~~~~~  444 (455)
T COG0534         403 FRLPLAYLLGFFFLGLAGVWIGFPLSLILRAILLLLRLRRGR  444 (455)
T ss_pred             HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999888417427669999999999999999999998