HHsearch alignment for GI: 254780793 and conserved domain: PRK01766
>PRK01766 multidrug efflux protein; Reviewed.
Probab=99.97 E-value=3.2e-29 Score=170.77 Aligned_cols=232 Identities=16% Similarity=0.294 Sum_probs=196.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 54324100013468887643201202333202556-55663057777533211000000111232210023444433223
Q gi|254780793|r 225 RLTHNVKFFLKLTFPLMVTGGIIQISNIVGRAIAS-RETGIISAIQYAERIYSLPVGVIGGAMMIVILPALSRSLRSKNK 303 (518)
Q Consensus 225 ~~~~~~k~~l~~~~p~~l~~~~~~i~~~i~~~~as-~~~g~vs~~~~a~~l~~l~~~i~~~ai~~~~~P~ls~~~~~~d~ 303 (518)
T Consensus 3 ~~~~e~K~il~la~P~~~~~l~~~~~~~vD~~~vg~lg~~alAav~~~~~i~~~~~~-~~~gl~~g~~~lvsq~~Ga~~~ 81 (452)
T PRK01766 3 KYKSEARQLLALALPILLAQVAQTAMGFVDTVMAGGVSATDLAAVAIGTSIWLPVIL-FGHGLLLALTPIVAQLNGAGRR 81 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCH
T ss_conf 479999999999999999999999999999999872089999999999999999999-9999999999999999789988
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 67899989754113442158999998525723111210478644554566665554201056775312320235443310
Q gi|254780793|r 304 QKSFELQNQAIECISFFGIPSAVALFMLSKEIVQTLYERGAFSSQNTILVSSFLSIYSIGILANILSKSLSTAFYAQNDM 383 (518)
Q Consensus 304 ~~~~~~~~~~~~~~~~i~~p~~~~l~~~~~~ii~llf~~g~F~~~~~~~~~~~L~~~~~~~~~~~~~~i~~~~~~a~g~~ 383 (518)
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~l~-g---~~~~v~~~a~~Yl~i~~~~~~~~~~~~~~~~~l~~~g~t 157 (452)
T PRK01766 82 ERIAHQVRQGLWLALFLSVLIMLVLYNAVPPILNMM-N---LEPDVADIAVGYLHALLWGIPAYLLYQVLRSFIDGLGKT 157 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 999999999999999999999999999999999981-9---829999999999999998789999999999998847984
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC----------CCCCHHHHHH
Q ss_conf 1346777888689999987520------21120049999999999999999999997115----------7889889999
Q gi|254780793|r 384 KAPMKFTIVSIAINLTIAIGSF------PFIGGYGIALAEVSSSWVNTICLAITLLKRKQ----------INLPFKTIYR 447 (518)
Q Consensus 384 ~~~~~~~~~~~~vni~l~~~li------~~~G~~G~a~at~i~~~~~~~~~~~~l~k~~~----------~~~~~~~~~~ 447 (518)
T Consensus 158 ~~~m~~~~~~~ilNi~l~~~lIfG~~g~p~lGv~GaA~At~is~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (452)
T PRK01766 158 KPTMVIGFLGLLVNIPLNYIFIYGKFGFPELGGVGCGVATAIVYWVMFLAMLIYIKRARRFRDFRLFKGLYKPDWAVIKR 237 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCCHHHHHH
T ss_conf 99999999999999988889876035763006889999999999999999999999845500200002103234999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780793|r 448 ILSVSISAGLMGFF 461 (518)
Q Consensus 448 ~~~~~~~~~im~~~ 461 (518)
T Consensus 238 i~~ig~P~~~~~~~ 251 (452)
T PRK01766 238 LLKLGLPIGLAIFF 251 (452)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99973289999999