HHsearch alignment for GI: 254780793 and conserved domain: TIGR02900
>TIGR02900 spore_V_B stage V sporulation protein B; InterPro: IPR014249 This entry represents SpoVB, which is the stage V sporulation protein B of the bacterial endospore formation program in Bacillus subtilis and various other Firmcutes. It is nearly universal among endospore-formers. Paralogs with high sequence similarity to SpoVB exist, such as YkvU from B. subtilis and a number Clostridium proteins, but they are excluded from this entry. .
Probab=100.00 E-value=0 Score=366.02 Aligned_cols=468 Identities=16% Similarity=0.278 Sum_probs=389.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 36889999999999999999999999999577757899999999789999999757789999999999984489789999
Q gi|254780793|r 3 IIRNFLTVCASTLGSRFLGFIRETLVAATLGVGKVTDVFYVAFYLTFIFRRLAAEGIFHNSFIPLFSQEKENNGSESAQR 82 (518)
Q Consensus 3 ~~k~~~~~~~~~~~skilG~~r~~~~a~~~G~~~~~da~~~a~~i~~~~~~l~~~G~~~~a~ip~~~~~~~~~~~~~~~~ 82 (518)
T Consensus 1 Flkg~fiL~~a~~iTr~LGFifri~ls~~LGaEG-vGLY~l~~P~y~L~itL~~~G-l~~AISk~~Ae~~a~~D~~n~~k 78 (493)
T TIGR02900 1 FLKGTFILTIANLITRILGFIFRIVLSRILGAEG-VGLYGLAMPIYFLFITLTTGG-LPVAISKFVAEASAKNDKKNIKK 78 (493)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 9048999999988846778988998865423663-117888999999999998653-99999999999871377446689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 99999999999999999999996534344457887541011112456554443321246888765688998842227999
Q gi|254780793|r 83 LSSEIFSILILSLVVLTVVVELILPLLIRFIIAPGFADQSDKYFLTIQLSRVMFPSIIFISLASLVTGMLFALGRYFIAS 162 (518)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l~a~g~~~~~~~~~la~~~~~i~~p~~~~~~~~~~~~~~l~~~~~f~~~a 162 (518)
T Consensus 79 il~~S~~f~~~~s~~v~~~~f~~~p~Ia~~ll~-----D~----R~~~~l~~i~P~~~~iA~SsvLkGYFqG~~~~~~~A 149 (493)
T TIGR02900 79 ILKVSLIFTLIWSLIVTAIVFLLAPFIASTLLK-----DE----RSLYSLLVICPAVPIIALSSVLKGYFQGISNMKPPA 149 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
T ss_conf 999999999999999999999998999985167-----60----789999998328999999888888755355054678
Q ss_pred HHHHHHHCHHHHHHHHH--HCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHCCC-CCCCCCCCCCCC-----CCCHHH
Q ss_conf 99985401034677776--2356865443200012211101110002310121036-544456775432-----410001
Q gi|254780793|r 163 IAPIVINVFPIFALTYA--LWHPSSPQETTYLLAWGVFLSNVVHFWIVYCCAKNDG-VKLRFQYPRLTH-----NVKFFL 234 (518)
Q Consensus 163 ~~~vi~ni~~i~~~~~~--~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~k~~l 234 (518)
T Consensus 150 ~~qv~Eq~vRI~~~~~li~~F~~~~~e~ava~A~~~~~lGE~~SLl~l~~~f~~~~~~~~r~~~~~~~~egk~q~l~~l~ 229 (493)
T TIGR02900 150 YIQVIEQIVRISVVALLISLFLPYGVEYAVAGAYLSLVLGELVSLLYLYFFFKRKKSISIRKPFFDYKSEGKAQLLFDLL 229 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 99999999999999999998841368899999999999999999999999988860025315634555332899999999
Q ss_pred HHHHHHHHHHHHCCCHHHHHCCCCC--C---C---CCCHHH----HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 3468887643201202333202556--5---5---663057----77753321100000011123221002344443322
Q gi|254780793|r 235 KLTFPLMVTGGIIQISNIVGRAIAS--R---E---TGIISA----IQYAERIYSLPVGVIGGAMMIVILPALSRSLRSKN 302 (518)
Q Consensus 235 ~~~~p~~l~~~~~~i~~~i~~~~as--~---~---~g~vs~----~~~a~~l~~l~~~i~~~ai~~~~~P~ls~~~~~~d 302 (518)
T Consensus 230 ~~S~P~t~srf~~s~l~~~~~llvp~rL~~AGv~~~~A~~~yG~lsGmA~~l~~~P~-vIt~SlST~LvP~iSEa~~kk~ 308 (493)
T TIGR02900 230 SVSLPLTLSRFIGSLLYFLETLLVPQRLVIAGVTYREATSLYGKLSGMAMPLLTLPA-VITSSLSTALVPDISEAMAKKN 308 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCC
T ss_conf 998648888999999999868899999998779999999985588607999987689-9999999987788998755354
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH-HCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHH
Q ss_conf 36789998975411344215899999852572311121-04786445545666655542010567753123202354433
Q gi|254780793|r 303 KQKSFELQNQAIECISFFGIPSAVALFMLSKEIVQTLY-ERGAFSSQNTILVSSFLSIYSIGILANILSKSLSTAFYAQN 381 (518)
Q Consensus 303 ~~~~~~~~~~~~~~~~~i~~p~~~~l~~~~~~ii~llf-~~g~F~~~~~~~~~~~L~~~~~~~~~~~~~~i~~~~~~a~g 381 (518)
T Consensus 309 y~~~~~Ri~qa~risll~G~~~~~I~l~~p~~l~~L~yP~~--------~~~g~fi~~~a~~~pf~Y~~~~~~siL~gLg 380 (493)
T TIGR02900 309 YSLVEKRINQALRISLLLGLITTVILLVIPDELGKLFYPGR--------PDAGNFIRVLAPSFPFLYLSAPLQSILQGLG 380 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 68999999999999999999999999997667764158998--------5388899999988999998899999997315
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH-HHHHHHHHHHHHH
Q ss_conf 101346777888689999987520--2112004999999999999999999999711578898899-9999999999999
Q gi|254780793|r 382 DMKAPMKFTIVSIAINLTIAIGSF--PFIGGYGIALAEVSSSWVNTICLAITLLKRKQINLPFKTI-YRILSVSISAGLM 458 (518)
Q Consensus 382 ~~~~~~~~~~~~~~vni~l~~~li--~~~G~~G~a~at~i~~~~~~~~~~~~l~k~~~~~~~~~~~-~~~~~~~~~~~im 458 (518)
T Consensus 381 ~~~~~l~NSlI~~iv~~~~lf~Lt~~P~i~I~G~a~~~~~~~~l~~~Ln~~~~~K~~~i~i~~~~~v~kP~~~l~--~~l 458 (493)
T TIGR02900 381 KQKVALRNSLIGAIVKIILLFVLTSIPSINIYGYALTIIITSVLVLVLNLAEIKKNIRITIDLSEFVLKPIFALL--GIL 458 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHH--HHH
T ss_conf 446999999999999999999998530467899999999999999998699876552215115676873799999--999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999998655310002799999999999999999999
Q gi|254780793|r 459 GFFIILFRPYFNQFSSATTFFDPFKNLVIMLSGAMLVYLF 498 (518)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vY~~ 498 (518)
T Consensus 459 ~~~~l~~~~~~~------~~~~~~~~~~~~i~~~~~~Y~~ 492 (493)
T TIGR02900 459 VYLILSLLKYII------FNVNILINLLLIIILGFSIYIL 492 (493)
T ss_pred HHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999888740------4534679999999999999982