HHsearch alignment for GI: 254780793 and conserved domain: pfam01554
>pfam01554 MatE MatE. The MatE domain
Probab=99.78 E-value=1.3e-19 Score=120.01 Aligned_cols=160 Identities=16% Similarity=0.246 Sum_probs=139.6
Q ss_pred HHHHHHHHCCCHHHHHCCCCC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 887643201202333202556-5566305777753321100000011123221002344443322367899989754113
Q gi|254780793|r 239 PLMVTGGIIQISNIVGRAIAS-RETGIISAIQYAERIYSLPVGVIGGAMMIVILPALSRSLRSKNKQKSFELQNQAIECI 317 (518)
Q Consensus 239 p~~l~~~~~~i~~~i~~~~as-~~~g~vs~~~~a~~l~~l~~~i~~~ai~~~~~P~ls~~~~~~d~~~~~~~~~~~~~~~ 317 (518)
T Consensus 1 P~~l~~~~~~~~~~vd~~~vg~lG~~~lAa~~i~~~i~~~~~-~~~~g~~~a~~~~vs~~~Ga~~~~~~~~~~~~~~~~~ 79 (161)
T pfam01554 1 PIILENLLQSLYSLIDTLFVGHLGAVALAAVSIANSIASLIF-MFLLGLSTALTTLVGQALGAGNFKRAGVALRQGLILS 79 (161)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 988899999999999999999749999999999999999999-9999999999999999868875999999999999999
Q ss_pred CCCHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44215899999852572311121047864455456666555420105677531232023544331013467778886899
Q gi|254780793|r 318 SFFGIPSAVALFMLSKEIVQTLYERGAFSSQNTILVSSFLSIYSIGILANILSKSLSTAFYAQNDMKAPMKFTIVSIAIN 397 (518)
Q Consensus 318 ~~i~~p~~~~l~~~~~~ii~llf~~g~F~~~~~~~~~~~L~~~~~~~~~~~~~~i~~~~~~a~g~~~~~~~~~~~~~~vn 397 (518)
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~-~~---~~~~v~~~a~~yl~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~i~~~~~n 155 (161)
T pfam01554 80 LLISLPIALLIILFREPILSL-FT---QDEEVLELASKYLRILALGIPFLSLQFVLSGFLRGAGDTKPPLYINLISLLLN 155 (161)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 999999999999889999999-79---78999999999999999999999999999999988996599999999999999
Q ss_pred HHHHHH
Q ss_conf 999875
Q gi|254780793|r 398 LTIAIG 403 (518)
Q Consensus 398 i~l~~~ 403 (518)
T Consensus 156 i~l~yl 161 (161)
T pfam01554 156 IPLNYL 161 (161)
T ss_pred HHHHHC
T ss_conf 998429