RPS-BLAST 2.2.22 [Sep-27-2009]

Database: mmdb70 
           33,805 sequences; 4,956,049 total letters

Searching..................................................done

Query= gi|254780793|ref|YP_003065206.1| integral membrane protein MviN
[Candidatus Liberibacter asiaticus str. psy62]
         (518 letters)



>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
           acyl-carrier-protein, beta-ketoacyl reductase,
           beta-ketoacyl synthase, dehydratase; 4.00A
           {Saccharomyces cerevisiae} (B:1772-1800,B:1916-2006)
          Length = 120

 Score = 29.0 bits (65), Expect = 1.6
 Identities = 6/27 (22%), Positives = 15/27 (55%), Gaps = 1/27 (3%)

Query: 325 AVALFMLSKEIVQTLYERGAFSSQNTI 351
           ++A  M  + +V+ ++ RG  + Q  +
Sbjct: 1   SLADVMSIESLVEVVFYRG-MTMQVAV 26


>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken
           spring-8 center, oxygnase component, 4-
           hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus
           thermophilus HB8} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A*
           2yyj_A* (A:53-137,A:278-457)
          Length = 265

 Score = 27.4 bits (61), Expect = 4.2
 Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 5/44 (11%)

Query: 475 ATTFFDPFKNLVIMLSGAMLVYLFSIFLFLGKDFLSPLQQMIRK 518
               +   + ++  +  + L+ L S      KDF  PL   + K
Sbjct: 173 YPRLYPRIREILEQIGASGLITLPS-----EKDFKGPLGPFLEK 211


>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic
           subunit alpha isoform; PI3KCA, PI3K, PIK3R1,
           phosphatidilynositol 3,4,5- triphosphate, wortmannin,
           H1047R, ATP-binding, disease mutation, kinase; HET: KWT;
           2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 2enq_A
           (A:875-1091)
          Length = 217

 Score = 27.0 bits (59), Expect = 5.7
 Identities = 7/60 (11%), Positives = 16/60 (26%), Gaps = 1/60 (1%)

Query: 442 FKTIYRILSVSISAGLMGFFIILFRPYFNQFSSATTFFDPFKNLVIMLSG-AMLVYLFSI 500
             TI +I       G + F       +    +    +           +G  +  ++  I
Sbjct: 3   SHTIMQIQCKGGLKGALQFNSHTLHQWLKDKNKGEIYDAAIDLFTRSCAGYCVATFILGI 62


  Database: mmdb70
    Posted date:  Jun 20, 2010  3:12 AM
  Number of letters in database: 4,956,049
  Number of sequences in database:  33,805
  
Lambda     K      H
   0.330    0.142    0.412 

Gapped
Lambda     K      H
   0.267   0.0514    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 33805
Number of Hits to DB: 3,607,621
Number of extensions: 154923
Number of successful extensions: 501
Number of sequences better than 10.0: 1
Number of HSP's gapped: 501
Number of HSP's successfully gapped: 21
Length of query: 518
Length of database: 4,956,049
Length adjustment: 92
Effective length of query: 426
Effective length of database: 1,845,989
Effective search space: 786391314
Effective search space used: 786391314
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 57 (26.2 bits)