HHsearch alignment for GI: 254780794 and conserved domain: COG0143

Probab=96.85  E-value=0.03  Score=35.16  Aligned_cols=93  Identities=19%  Similarity=0.222  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEEE--CCCCCCCHHHHHHHHH--HHHHHHHHCCCCEEEEE-EEHHH-------HCCCCCHHHHHHHH-HHH
Q ss_conf             988888789601--5896781055798899--99999850599589997-31157-------30789858999999-999
Q gi|254780794|r    1 MLSSDNLFVSGV--QPTGVLHLGNYLGMIR--NVIRRQETCNHLGMYFI-ADLHA-------ITNNIVQENLRYQS-RLF   67 (355)
Q Consensus         1 ~~~~~~~vltG~--~PtG~~HLG~y~g~i~--~~i~lq~~~~~~~~~~I-AD~ha-------lt~~~~~~~~~~~~-~~~   67 (355)
T Consensus         1 ~~~~~~~~VTtalpY~Ng~~HlGH~~~~l~ADv~aRy~Rl~G~~v~fvtGtDeHGt~I~~~A~~~g~tP~el~d~~~~~~   80 (558)
T COG0143           1 MKMMKKILVTTALPYPNGPPHLGHLYTYLAADVYARYLRLRGYEVFFLTGTDEHGTKIELKAEKEGITPQELVDKNHEEF   80 (558)
T ss_pred             CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf             99787389955898899986413678887899999999826975899951478777889999985999899999999999


Q ss_pred             HHHHHHCCCCCCCCEEEECCCHHHHHHHH
Q ss_conf             99999628681112365247407889999
Q gi|254780794|r   68 VASFLAAGVDPSRNIIFKQSDVGYHADLS   96 (355)
Q Consensus        68 ~~~~lA~Gldp~k~~if~QS~v~e~~eL~   96 (355)
T Consensus        81 ~~~~~~l~Isf---D~F~rTt~~~h~~~v  106 (558)
T COG0143          81 KELFKALNISF---DNFIRTTSPEHKELV  106 (558)
T ss_pred             HHHHHHHCCCC---CEECCCCCHHHHHHH
T ss_conf             99999809854---300168977799999