HHsearch alignment for GI: 254780794 and conserved domain: PRK11893

>PRK11893 methionyl-tRNA synthetase; Reviewed.
Probab=96.42  E-value=0.022  Score=36.17  Aligned_cols=80  Identities=18%  Similarity=0.184  Sum_probs=47.0

Q ss_pred             ECCCCCCCHHHHHHHHH---HHHHHHHHCCCCEEEEE-EEHHHHC-------CCCCHHHH-HHHHHHHHHHHHHCCCCCC
Q ss_conf             15896781055798899---99999850599589997-3115730-------78985899-9999999999996286811
Q gi|254780794|r   12 VQPTGVLHLGNYLGMIR---NVIRRQETCNHLGMYFI-ADLHAIT-------NNIVQENL-RYQSRLFVASFLAAGVDPS   79 (355)
Q Consensus        12 ~~PtG~~HLG~y~g~i~---~~i~lq~~~~~~~~~~I-AD~halt-------~~~~~~~~-~~~~~~~~~~~lA~Gldp~   79 (355)
T Consensus        10 Py~nG~lHlGH-a~~~~~~Dv~~Ry~R~~G~~v~~~~GtD~hg~~i~~~A~~~g~~p~e~~~~~~~~~~~~~~~l~i~~D   88 (512)
T PRK11893         10 YYPNGKPHIGH-AYTTLAADVLARFKRLRGYDVFFLTGTDEHGQKIERKAEEAGISPQELADRNSASFKRLWEALNISYD   88 (512)
T ss_pred             CCCCCCCCCCC-CHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             98899734463-58799999999999955997074687177519999999985999999999999999999998099888


Q ss_pred             CCEEEECCCHHHHHHH
Q ss_conf             1236524740788999
Q gi|254780794|r   80 RNIIFKQSDVGYHADL   95 (355)
Q Consensus        80 k~~if~QS~v~e~~eL   95 (355)
T Consensus        89 ~---f~rT~~~~~~~~  101 (512)
T PRK11893         89 D---FIRTTDERHKEA  101 (512)
T ss_pred             C---CCCCCCHHHHHH
T ss_conf             7---877998799999