HHsearch alignment for GI: 254780794 and conserved domain: PRK12558
>PRK12558 glutamyl-tRNA synthetase; Provisional.
Probab=97.52 E-value=0.00043 Score=47.65 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=56.8
Q ss_pred EEEEEC--CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE-EEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 896015--8967810557988999999985059958999-7311573078985899999999999999628681112365
Q gi|254780794|r 8 FVSGVQ--PTGVLHLGNYLGMIRNVIRRQETCNHLGMYF-IADLHAITNNIVQENLRYQSRLFVASFLAAGVDPSRNIIF 84 (355)
Q Consensus 8 vltG~~--PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~-IAD~halt~~~~~~~~~~~~~~~~~~~lA~Gldp~k~~if 84 (355)
T Consensus 3 vrtRfAPSPTG~lHiG~~rtAl~n~l~Ar~~~G--~fiLRIEDt----D~~R--~~~~~~~~i~~~L~WlGl~wDe--~~ 72 (461)
T PRK12558 3 VTVRFAPSPTGYIHIGNARTALFNWLFARAHGG--KFILRYDDT----DVER--SKQEYADAIADDLRWLGLDPDR--VE 72 (461)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC--EEEEEECCC----CCCC--CCHHHHHHHHHHHHHCCCCCCC--CC
T ss_conf 548749898985327899999999999996199--899987768----9876--8879999999999987999998--74
Q ss_pred ECCCHHHHHHHH--------HHHHHCCCHHHHH
Q ss_conf 247407889999--------9985105367752
Q gi|254780794|r 85 KQSDVGYHADLS--------WILSCVARMGWMN 109 (355)
Q Consensus 85 ~QS~v~e~~eL~--------~~l~~~~~~~~l~ 109 (355)
T Consensus 73 ~QS~r~~~Y~~~~~~L~~~g~aY~Cfct~eel~ 105 (461)
T PRK12558 73 YQSKRFDRYAEAAEKLKAAGLLYACYETAEELE 105 (461)
T ss_pred HHHCCHHHHHHHHHHHHHCCCCEECCCCHHHHH
T ss_conf 164399999999999998699365388889999