HHsearch alignment for GI: 254780794 and conserved domain: PTZ00126
>PTZ00126 tyrosyl-tRNA synthetase; Provisional.
Probab=100.00 E-value=0 Score=336.73 Aligned_cols=274 Identities=23% Similarity=0.336 Sum_probs=210.7
Q ss_pred CCEEEEEECCCCCCCHHH-HHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCC---CCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 887896015896781055-79889999999850599589997311573078---98589999999999999962868111
Q gi|254780794|r 5 DNLFVSGVQPTGVLHLGN-YLGMIRNVIRRQETCNHLGMYFIADLHAITNN---IVQENLRYQSRLFVASFLAAGVDPSR 80 (355)
Q Consensus 5 ~~~vltG~~PtG~~HLG~-y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~---~~~~~~~~~~~~~~~~~lA~Gldp~k 80 (355)
T Consensus 82 ~P~cY~GfePSGr~Hig~g~v~~i-kvn~l~~AG-c~v~illADwhA~LNnKmggdlekIr~~~~Y~~ev~kA~Gm~~dk 159 (399)
T PTZ00126 82 YPICYDGFEPSGRMHIAQGLLKAI-NVNKLTKAG-CTFVFWIADWFAMLNNKMGGDLKKIKKVGEYFIHVWKAAGMNMEN 159 (399)
T ss_pred CCEEEECCCCCCCCCHHHHHHHHH-HHHHHHHCC-CEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 986986747889861054678899-999999789-979999742468756767999999999999999999985998243
Q ss_pred CEEEECCCH-HHHHHHHHH----HHHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHH
Q ss_conf 236524740-788999999----851053677520122112332011101346641111466543565286601112121
Q gi|254780794|r 81 NIIFKQSDV-GYHADLSWI----LSCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLYRATHVPVGEDQ 155 (355)
Q Consensus 81 ~~if~QS~v-~e~~eL~~~----l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ 155 (355)
T Consensus 160 v~Fv~~Sd~i~~~~~eYw~~Vmdiar~~tl~r~kr~~~---imgr~e~d~~~~SqllYP~MQa~Di~~L~vDi~~gGmDQ 236 (399)
T PTZ00126 160 VKFLWASDEINKNPNEYWLLVMDISRSFNITRIKRCSQ---IMGRNEGDEQPCAQLLYPCMQCADIFFLGADICQLGMDQ 236 (399)
T ss_pred EEEEECHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH---HHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCEEECCHHH
T ss_conf 38996178654261267999999987616788999998---751034667446766314554151330567644336019
Q ss_pred -HHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -2689999999999987614011000001232111345743143223475643033567741113213455445200145
Q gi|254780794|r 156 -RQHLEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLD 234 (355)
Q Consensus 156 -~~HieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D 234 (355)
T Consensus 237 RKi~m-LARey~~~~~~k~k---------------------pii-----l~h~mlpGL~~g~~KMSkSdp~--saI~m~D 287 (399)
T PTZ00126 237 RKVNM-LAREYCDLKKIKKK---------------------PII-----LSHHMLPGLLEGQEKMSKSDPN--SAIFMED 287 (399)
T ss_pred HHHHH-HHHHHHHHCCCCCC---------------------CEE-----EECCCCCCCCCCCCCCCCCCCC--CEEEECC
T ss_conf 99999-99998765288778---------------------679-----8577776556687656668987--7212018
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH--CC---------------CCCCCCHHHHHHHH--CCCCHHH
Q ss_conf 38899999875200122334643455668763431331--12---------------22225288899986--7999899
Q gi|254780794|r 235 NPDIIAKKIQKAKTDGDVLPSEVSGLENRLEAKNLIEI--FA---------------TMRQIKIEEALKQF--GGKNFSQ 295 (355)
Q Consensus 235 ~~e~I~kKI~ka~TDs~~~~~~~~~~~~~~~v~~Ll~i--fs---------------~~~~~~~~e~~~~~--g~~~~gd 295 (355)
T Consensus 288 s~e~V~kKIkkAyCpp~~v----e~----NPvLe~~kyvIfP~~~~f~V~R~ek~GG~~ty~s~eeLe~dy~~g~LHP~D 359 (399)
T PTZ00126 288 SAEEVNRKIKKAYCPPGVI----EG----NPIIAYFKSIVFPKFNSFTIERKEKNGGDVTYNTYEELEADYLSGALHPAD 359 (399)
T ss_pred CHHHHHHHHHHCCCCCCCC----CC----CCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHH
T ss_conf 9999999998456999886----87----839999887320457835885675558877155899999999759989899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf 9899999999983379999999982799
Q gi|254780794|r 296 FKLALADAVIEEIVPISQKIQHLLKDKS 323 (355)
Q Consensus 296 lK~~Lae~I~~~L~PIRer~~~l~~d~~ 323 (355)
T Consensus 360 LK~ava~~Ln~iL~PVRe---~F~~npE 384 (399)
T PTZ00126 360 LKPALAKYLNLMLQPVRD---HFANNPE 384 (399)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHCCHH
T ss_conf 999999999999999999---9856999