HHsearch alignment for GI: 254780794 and conserved domain: PTZ00126

>PTZ00126 tyrosyl-tRNA synthetase; Provisional.
Probab=100.00  E-value=0  Score=336.73  Aligned_cols=274  Identities=23%  Similarity=0.336  Sum_probs=210.7

Q ss_pred             CCEEEEEECCCCCCCHHH-HHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCC---CCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             887896015896781055-79889999999850599589997311573078---98589999999999999962868111
Q gi|254780794|r    5 DNLFVSGVQPTGVLHLGN-YLGMIRNVIRRQETCNHLGMYFIADLHAITNN---IVQENLRYQSRLFVASFLAAGVDPSR   80 (355)
Q Consensus         5 ~~~vltG~~PtG~~HLG~-y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~---~~~~~~~~~~~~~~~~~lA~Gldp~k   80 (355)
T Consensus        82 ~P~cY~GfePSGr~Hig~g~v~~i-kvn~l~~AG-c~v~illADwhA~LNnKmggdlekIr~~~~Y~~ev~kA~Gm~~dk  159 (399)
T PTZ00126         82 YPICYDGFEPSGRMHIAQGLLKAI-NVNKLTKAG-CTFVFWIADWFAMLNNKMGGDLKKIKKVGEYFIHVWKAAGMNMEN  159 (399)
T ss_pred             CCEEEECCCCCCCCCHHHHHHHHH-HHHHHHHCC-CEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             986986747889861054678899-999999789-979999742468756767999999999999999999985998243


Q ss_pred             CEEEECCCH-HHHHHHHHH----HHHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHH
Q ss_conf             236524740-788999999----851053677520122112332011101346641111466543565286601112121
Q gi|254780794|r   81 NIIFKQSDV-GYHADLSWI----LSCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLYRATHVPVGEDQ  155 (355)
Q Consensus        81 ~~if~QS~v-~e~~eL~~~----l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ  155 (355)
T Consensus       160 v~Fv~~Sd~i~~~~~eYw~~Vmdiar~~tl~r~kr~~~---imgr~e~d~~~~SqllYP~MQa~Di~~L~vDi~~gGmDQ  236 (399)
T PTZ00126        160 VKFLWASDEINKNPNEYWLLVMDISRSFNITRIKRCSQ---IMGRNEGDEQPCAQLLYPCMQCADIFFLGADICQLGMDQ  236 (399)
T ss_pred             EEEEECHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHH---HHCCCCCCCCCHHHHHHHHHHCCCHHHCCCCEEECCHHH
T ss_conf             38996178654261267999999987616788999998---751034667446766314554151330567644336019


Q ss_pred             -HHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             -2689999999999987614011000001232111345743143223475643033567741113213455445200145
Q gi|254780794|r  156 -RQHLEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLD  234 (355)
Q Consensus       156 -~~HieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D  234 (355)
T Consensus       237 RKi~m-LARey~~~~~~k~k---------------------pii-----l~h~mlpGL~~g~~KMSkSdp~--saI~m~D  287 (399)
T PTZ00126        237 RKVNM-LAREYCDLKKIKKK---------------------PII-----LSHHMLPGLLEGQEKMSKSDPN--SAIFMED  287 (399)
T ss_pred             HHHHH-HHHHHHHHCCCCCC---------------------CEE-----EECCCCCCCCCCCCCCCCCCCC--CEEEECC
T ss_conf             99999-99998765288778---------------------679-----8577776556687656668987--7212018


Q ss_pred             CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH--CC---------------CCCCCCHHHHHHHH--CCCCHHH
Q ss_conf             38899999875200122334643455668763431331--12---------------22225288899986--7999899
Q gi|254780794|r  235 NPDIIAKKIQKAKTDGDVLPSEVSGLENRLEAKNLIEI--FA---------------TMRQIKIEEALKQF--GGKNFSQ  295 (355)
Q Consensus       235 ~~e~I~kKI~ka~TDs~~~~~~~~~~~~~~~v~~Ll~i--fs---------------~~~~~~~~e~~~~~--g~~~~gd  295 (355)
T Consensus       288 s~e~V~kKIkkAyCpp~~v----e~----NPvLe~~kyvIfP~~~~f~V~R~ek~GG~~ty~s~eeLe~dy~~g~LHP~D  359 (399)
T PTZ00126        288 SAEEVNRKIKKAYCPPGVI----EG----NPIIAYFKSIVFPKFNSFTIERKEKNGGDVTYNTYEELEADYLSGALHPAD  359 (399)
T ss_pred             CHHHHHHHHHHCCCCCCCC----CC----CCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHH
T ss_conf             9999999998456999886----87----839999887320457835885675558877155899999999759989899


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCHH
Q ss_conf             9899999999983379999999982799
Q gi|254780794|r  296 FKLALADAVIEEIVPISQKIQHLLKDKS  323 (355)
Q Consensus       296 lK~~Lae~I~~~L~PIRer~~~l~~d~~  323 (355)
T Consensus       360 LK~ava~~Ln~iL~PVRe---~F~~npE  384 (399)
T PTZ00126        360 LKPALAKYLNLMLQPVRD---HFANNPE  384 (399)
T ss_pred             HHHHHHHHHHHHHHHHHH---HHHCCHH
T ss_conf             999999999999999999---9856999