HHsearch results for GI: 254780794 and protein with PDBid: 1i6k_A
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A
Probab=100.00 E-value=0 Score=699.60 Aligned_cols=326 Identities=41% Similarity=0.640 Sum_probs=308.1
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 88789601589678105579889999999850599589997311573078985899999999999999628681112365
Q gi|254780794|r 5 DNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNIVQENLRYQSRLFVASFLAAGVDPSRNIIF 84 (355)
Q Consensus 5 ~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~~~~~~~~~~~~~~~~~lA~Gldp~k~~if 84 (355)
++|||||+||||++|||||+|++++|+.+|+ ++++|||||||||||++.++.++++++++++++|+|||+||+|++||
T Consensus 1 mkrv~tG~~PSG~~HlG~~~g~i~~~~~lq~--~~~~~i~iAD~ha~~~~~~~~~l~~~~~~~~~~~~A~G~dp~k~~i~ 78 (328)
T 1i6k_A 1 MKTIFSGIQPSGVITIGNYIGALRQFVELQH--EYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLF 78 (328)
T ss_dssp CCEEEEEECCCSCCBHHHHHHTHHHHHHHTT--TSEEEEEECHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCCTTTEEEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHC--CCCEEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 9846857288870378889999999999857--99889996308664067899999999999999999837998730798
Q ss_pred ECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHH
Q ss_conf 24740788999999851053677520122112332011101346641111466543565286601112121268999999
Q gi|254780794|r 85 KQSDVGYHADLSWILSCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLYRATHVPVGEDQRQHLEITRL 164 (355)
Q Consensus 85 ~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~~a~~VpVG~DQ~~HieltRd 164 (355)
+||++++|.||+|+|+|+++++++.|+++||++.++ .++.++|+|+||+|||||||+|++|+||||+||+||+|||||
T Consensus 79 ~qs~~~~~~~l~~~~~~~~~~~~~~r~~~~k~~~~~--~~~~~~g~l~YP~lQaADIl~~~~d~vpvG~DQ~~h~~ltRd 156 (328)
T 1i6k_A 79 IQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAG--KEAVSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRD 156 (328)
T ss_dssp EGGGCTHHHHHHHHHHHHSCHHHHHTCHHHHHHHTT--CSSCCHHHHTHHHHHHHHHHTTTCSEEECCGGGHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 504235578999999853247888876412322124--678872323756876203063189915488026899999999
Q ss_pred HHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99999876140110000012321113457431432234756430335677411132134554452001453889999987
Q gi|254780794|r 165 IAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDIIAKKIQ 244 (355)
Q Consensus 165 iA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~I~kKI~ 244 (355)
||+|||+.||. .|+.|...+...++++|++.+|++|||||+++++|+|+|+|+|++|++||+
T Consensus 157 ia~k~n~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~kmskS~~~~~~~I~l~d~~~~i~kKi~ 218 (328)
T 1i6k_A 157 LAERFNKRYGE------------------LFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIK 218 (328)
T ss_dssp HHHHHHHHHCS------------------CCCCCEEECCSSSSSCBCSSCTTSBCCTTCSCGGGCCBTTCCHHHHHHHHH
T ss_pred HHHHHHHHCCC------------------CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
T ss_conf 99874652487------------------567731135654345652489876677678985553036589999997414
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
Q ss_conf 52001223346434556687634313311222225288899986799989998999999999833799999999827999
Q gi|254780794|r 245 KAKTDGDVLPSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQFGGKNFSQFKLALADAVIEEIVPISQKIQHLLKDKSY 324 (355)
Q Consensus 245 ka~TDs~~~~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~~~g~~~~gdlK~~Lae~I~~~L~PIRer~~~l~~d~~~ 324 (355)
+|+||+..+. .+..+.+|++++++.+|+.+++.+.+++..+|++.+||+||+.|+|.|+++|+||||||++|++|+ +
T Consensus 219 ~a~td~~~~~--~~~~~~~p~~~~l~~i~~~~~~~~~eel~~~y~~~~~gdlK~~lae~l~~~l~Pirek~~~l~~~~-~ 295 (328)
T 1i6k_A 219 SAVTDSEGTI--RYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESE-E 295 (328)
T ss_dssp HCCCCSSCCC--CCBTTTBHHHHHHHHHHHHHHCCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-H
T ss_pred CCCCCCCCCC--CCCCCCCCCCCCHHHEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-H
T ss_conf 4657897766--767678998541422002158867999999977998668999999999998589999999985977-8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999999999999999999828899
Q gi|254780794|r 325 LDTILVEGANRARCRAQETMKYVNEIVGLSH 355 (355)
Q Consensus 325 v~~IL~~Ga~kAr~~A~~tl~~Vr~~iGl~y 355 (355)
|++||++|++|||++|++||++||++|||+|
T Consensus 296 l~~iL~~G~~kAr~~A~~tl~~Vr~~~Gl~~ 326 (328)
T 1i6k_A 296 LDRVLDEGAEKANRVASEMVRKMEQAMGLGR 326 (328)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999999999999999828987