HHsearch results for GI: 254780794 and protein with PDBid: 2ip1_A
>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A*
Probab=100.00 E-value=0 Score=494.42 Aligned_cols=305 Identities=18% Similarity=0.201 Sum_probs=246.4
Q ss_pred CCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCC--CHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 88878960158967-81055798899999998505995899973115730789--8589999999999999962868111
Q gi|254780794|r 4 SDNLFVSGVQPTGV-LHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNI--VQENLRYQSRLFVASFLAAGVDPSR 80 (355)
Q Consensus 4 ~~~~vltG~~PtG~-~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~--~~~~~~~~~~~~~~~~lA~Gldp~k 80 (355)
.+..|+||++|||. +|||||+|+++. ..+|+.+++.++|+|||+|+++++. .++++++++++++++|+||||||+|
T Consensus 101 ~~f~iytG~~PSg~~lHLGh~l~~~~~-k~~Q~~~~~~v~i~iaD~~a~~~~~~~s~e~i~~~~~e~~~~ilA~G~Dp~k 179 (432)
T 2ip1_A 101 KPFFLYTGRGPSSDSMHLGHMIPFVFT-KWLQEVFDVPLVIELTDDEKFLFKHKLTINDVKNFARENAKDIIAVGFDPKN 179 (432)
T ss_dssp CCCEEEEEECCCSSCCBGGGHHHHHHH-HHHHHHHTCCEEEEECHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCGGG
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHH-HHHHHCCCCCEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 985999472799962149999999999-9999767985058972347636477899999999999999999980859343
Q ss_pred CEEEECCCHHHHHHHHHHH--HHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH-----------CCC
Q ss_conf 2365247407889999998--510536775201221123320111013466411114665435652-----------866
Q gi|254780794|r 81 NIIFKQSDVGYHADLSWIL--SCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLY-----------RAT 147 (355)
Q Consensus 81 ~~if~QS~v~e~~eL~~~l--~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~-----------~a~ 147 (355)
++||.||+++.+..+.|++ +..++++++ +...++.+++++|+|+||+|||||||+| +|+
T Consensus 180 t~i~~~s~~~~~~~~~~~~~l~k~~t~~~~--------~~~~~~~~~~n~g~~~yP~lQaAdil~~~~~~~~~~~~~~~~ 251 (432)
T 2ip1_A 180 TFIFSDLQYMGGAFYETVVRVSRQITGSTA--------KAVFGFNDSDCIGKFHFASIQIATAFPSSFPNVLGLPDKTPC 251 (432)
T ss_dssp EEEEEHHHHCSHHHHHHHHHHHTSCCHHHH--------HHTTCCCTTSCHHHHHTHHHHHHTTSGGGCTTTTCCCTTCCE
T ss_pred EEEEEECHHHHHHHHHHHHHHCCCCCHHHH--------HHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCC
T ss_conf 599970166657799999975154423578--------887751355542224672576767774010444054445687
Q ss_pred CEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01112121268999999999998761401100000123211134574314322347564303356774111321345544
Q gi|254780794|r 148 HVPVGEDQRQHLEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDF 227 (355)
Q Consensus 148 ~VpVG~DQ~~HieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~ 227 (355)
+||||.||+||+|||||||+|||..++ ..+ .++.+|+|+++++|||||++ +
T Consensus 252 lvPvG~DQ~~hi~ltRdia~r~~~~~p------------------------~~i---~~~~l~~L~g~~~KMSkS~~--~ 302 (432)
T 2ip1_A 252 LIPCAIDQDPYFRVCRDVADKLKYSKP------------------------ALL---HSRFFPALQGSTTKMSASDD--T 302 (432)
T ss_dssp EEEEEGGGHHHHHHHHHHHHHHTSCCC------------------------EEE---EECCCCCTTC--------CG--G
T ss_pred EEECCHHHHHHHHHHHHHHHHCCCCCC------------------------CCC---CCCCCCCCCCCCCCCCCCCC--C
T ss_conf 665245478999999999985246887------------------------321---46553356763234556776--5
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHH--HHCCCCHHHHHHHHH
Q ss_conf 52001453889999987520012233----464345566876343133112222252888999--867999899989999
Q gi|254780794|r 228 SRINLLDNPDIIAKKIQKAKTDGDVL----PSEVSGLENRLEAKNLIEIFATMRQIKIEEALK--QFGGKNFSQFKLALA 301 (355)
Q Consensus 228 s~I~l~D~~e~I~kKI~ka~TDs~~~----~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~--~~g~~~~gdlK~~La 301 (355)
|+|+|+|+|++|++|||+|.||++.. ++..+|+++.|.+|.++..|.. ++.+.+++.. ..|+++||+||+.|+
T Consensus 303 s~I~L~D~pe~I~kKI~ka~td~g~~t~ee~~~~gg~p~~~~v~~~l~~f~~-dd~~leei~~~y~~G~l~~gdlKk~la 381 (432)
T 2ip1_A 303 TAIFMTDTPKQIQKKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLSFFKD-DDVFLKECYDKYKSGELLSGEMKKLCI 381 (432)
T ss_dssp GCCBTTCCHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHHHHHHHCC-CHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred CEEECCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 4787368999999874547727998744440005898305189999998669-868999999998559989899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Q ss_conf 9999983379999999982799999999999-----99999999999999999
Q gi|254780794|r 302 DAVIEEIVPISQKIQHLLKDKSYLDTILVEG-----ANRARCRAQETMKYVNE 349 (355)
Q Consensus 302 e~I~~~L~PIRer~~~l~~d~~~v~~IL~~G-----a~kAr~~A~~tl~~Vr~ 349 (355)
+.|+++|+|+||||+++.+ +.+++.+..+ ..+++..+..++++||+
T Consensus 382 e~l~~~l~~~rerr~~~~d--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~k 432 (432)
T 2ip1_A 382 ETLQEFVKAFQERRAQVDE--ETLDKFMVPHKLVWGEKERLVAPKPKTKQEKK 432 (432)
T ss_dssp HHHHHHHHHHHHHHHTCCH--HHHHHHHSCCCCCCSCSCCSSCCC--------
T ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 9999998999999999888--77998727354547750002545204565039