HHsearch results for GI: 254780794 and protein with PDBid: 2ip1_A

>2ip1_A Tryptophanyl-tRNA synthetase; rossmann fold, structural genomics, PSI-2, protein structure initiative; HET: PG4; 1.80A {Saccharomyces cerevisiae} PDB: 3kt0_A* 3kt3_A* 3kt6_A* 3kt8_A*
Probab=100.00  E-value=0  Score=494.42  Aligned_cols=305  Identities=18%  Similarity=0.201  Sum_probs=246.4

Q ss_pred             CCCEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCC--CHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             88878960158967-81055798899999998505995899973115730789--8589999999999999962868111
Q gi|254780794|r    4 SDNLFVSGVQPTGV-LHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNI--VQENLRYQSRLFVASFLAAGVDPSR   80 (355)
Q Consensus         4 ~~~~vltG~~PtG~-~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~--~~~~~~~~~~~~~~~~lA~Gldp~k   80 (355)
                      .+..|+||++|||. +|||||+|+++. ..+|+.+++.++|+|||+|+++++.  .++++++++++++++|+||||||+|
T Consensus       101 ~~f~iytG~~PSg~~lHLGh~l~~~~~-k~~Q~~~~~~v~i~iaD~~a~~~~~~~s~e~i~~~~~e~~~~ilA~G~Dp~k  179 (432)
T 2ip1_A          101 KPFFLYTGRGPSSDSMHLGHMIPFVFT-KWLQEVFDVPLVIELTDDEKFLFKHKLTINDVKNFARENAKDIIAVGFDPKN  179 (432)
T ss_dssp             CCCEEEEEECCCSSCCBGGGHHHHHHH-HHHHHHHTCCEEEEECHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCGGG
T ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHH-HHHHHCCCCCEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             985999472799962149999999999-9999767985058972347636477899999999999999999980859343


Q ss_pred             CEEEECCCHHHHHHHHHHH--HHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHH-----------CCC
Q ss_conf             2365247407889999998--510536775201221123320111013466411114665435652-----------866
Q gi|254780794|r   81 NIIFKQSDVGYHADLSWIL--SCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLY-----------RAT  147 (355)
Q Consensus        81 ~~if~QS~v~e~~eL~~~l--~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~-----------~a~  147 (355)
                      ++||.||+++.+..+.|++  +..++++++        +...++.+++++|+|+||+|||||||+|           +|+
T Consensus       180 t~i~~~s~~~~~~~~~~~~~l~k~~t~~~~--------~~~~~~~~~~n~g~~~yP~lQaAdil~~~~~~~~~~~~~~~~  251 (432)
T 2ip1_A          180 TFIFSDLQYMGGAFYETVVRVSRQITGSTA--------KAVFGFNDSDCIGKFHFASIQIATAFPSSFPNVLGLPDKTPC  251 (432)
T ss_dssp             EEEEEHHHHCSHHHHHHHHHHHTSCCHHHH--------HHTTCCCTTSCHHHHHTHHHHHHTTSGGGCTTTTCCCTTCCE
T ss_pred             EEEEEECHHHHHHHHHHHHHHCCCCCHHHH--------HHHHHHCCCCCCCCCCCCHHHHHHHHHHCHHHHCCCCCCCCC
T ss_conf             599970166657799999975154423578--------887751355542224672576767774010444054445687


Q ss_pred             CEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             01112121268999999999998761401100000123211134574314322347564303356774111321345544
Q gi|254780794|r  148 HVPVGEDQRQHLEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDF  227 (355)
Q Consensus       148 ~VpVG~DQ~~HieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~  227 (355)
                      +||||.||+||+|||||||+|||..++                        ..+   .++.+|+|+++++|||||++  +
T Consensus       252 lvPvG~DQ~~hi~ltRdia~r~~~~~p------------------------~~i---~~~~l~~L~g~~~KMSkS~~--~  302 (432)
T 2ip1_A          252 LIPCAIDQDPYFRVCRDVADKLKYSKP------------------------ALL---HSRFFPALQGSTTKMSASDD--T  302 (432)
T ss_dssp             EEEEEGGGHHHHHHHHHHHHHHTSCCC------------------------EEE---EECCCCCTTC--------CG--G
T ss_pred             EEECCHHHHHHHHHHHHHHHHCCCCCC------------------------CCC---CCCCCCCCCCCCCCCCCCCC--C
T ss_conf             665245478999999999985246887------------------------321---46553356763234556776--5


Q ss_pred             CCCCCCCCHHHHHHHHHHHHCCCCCC----CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHH--HHCCCCHHHHHHHHH
Q ss_conf             52001453889999987520012233----464345566876343133112222252888999--867999899989999
Q gi|254780794|r  228 SRINLLDNPDIIAKKIQKAKTDGDVL----PSEVSGLENRLEAKNLIEIFATMRQIKIEEALK--QFGGKNFSQFKLALA  301 (355)
Q Consensus       228 s~I~l~D~~e~I~kKI~ka~TDs~~~----~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~--~~g~~~~gdlK~~La  301 (355)
                      |+|+|+|+|++|++|||+|.||++..    ++..+|+++.|.+|.++..|.. ++.+.+++..  ..|+++||+||+.|+
T Consensus       303 s~I~L~D~pe~I~kKI~ka~td~g~~t~ee~~~~gg~p~~~~v~~~l~~f~~-dd~~leei~~~y~~G~l~~gdlKk~la  381 (432)
T 2ip1_A          303 TAIFMTDTPKQIQKKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLSFFKD-DDVFLKECYDKYKSGELLSGEMKKLCI  381 (432)
T ss_dssp             GCCBTTCCHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHHHHHHHCC-CHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred             CEEECCCCHHHHHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf             4787368999999874547727998744440005898305189999998669-868999999998559989899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHH
Q ss_conf             9999983379999999982799999999999-----99999999999999999
Q gi|254780794|r  302 DAVIEEIVPISQKIQHLLKDKSYLDTILVEG-----ANRARCRAQETMKYVNE  349 (355)
Q Consensus       302 e~I~~~L~PIRer~~~l~~d~~~v~~IL~~G-----a~kAr~~A~~tl~~Vr~  349 (355)
                      +.|+++|+|+||||+++.+  +.+++.+..+     ..+++..+..++++||+
T Consensus       382 e~l~~~l~~~rerr~~~~d--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~k  432 (432)
T 2ip1_A          382 ETLQEFVKAFQERRAQVDE--ETLDKFMVPHKLVWGEKERLVAPKPKTKQEKK  432 (432)
T ss_dssp             HHHHHHHHHHHHHHHTCCH--HHHHHHHSCCCCCCSCSCCSSCCC--------
T ss_pred             HHHHHHHHHHHHHHHHHHH--HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf             9999998999999999888--77998727354547750002545204565039