HHsearch results for GI: 254780794 and protein with PDBid: 3hzr_A
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural genomics of pathogenic protozoa, MSGPP; 3.00A {Entamoeba histolytica}
Probab=100.00 E-value=0 Score=471.10 Aligned_cols=285 Identities=16% Similarity=0.152 Sum_probs=231.7
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCC-CHHHHHHHHHHHHHHHHHCCCCCCCCEE
Q ss_conf 887896015896781055798899999998505995899973115730789-8589999999999999962868111236
Q gi|254780794|r 5 DNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNNI-VQENLRYQSRLFVASFLAAGVDPSRNII 83 (355)
Q Consensus 5 ~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~~-~~~~~~~~~~~~~~~~lA~Gldp~k~~i 83 (355)
+..|+||++|||++|||||++.+. ...+|+.+++.++|+|||+||++++. +.+++++++++++++|+||||||+||+|
T Consensus 82 ~~~vytG~~PSG~lHLGh~i~~~~-~k~lQ~~~~~~v~I~iaD~~a~~~~~~~~ee~~~~~~e~~~~~lA~G~DpeKt~i 160 (386)
T 3hzr_A 82 PTFIFIQKYPQKEVALEEYITLEF-ARYLQDAFNIQVIIQILDDIKVLNREATINEASKMSNDLMKYILAFGFNEDKTFI 160 (386)
T ss_dssp CEEEEEEECCCSSCBGGGHHHHHH-HHHHHHHHCCEEEEEECHHHHHHTTSCCHHHHHHHHHHHHHHHHHTCCCGGGEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 848994868873708989999999-9999976797599997447872478899999999999999999995889472289
Q ss_pred EECCCH-HHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCC---------CEEHHH
Q ss_conf 524740-7889999998510536775201221123320111013466411114665435652866---------011121
Q gi|254780794|r 84 FKQSDV-GYHADLSWILSCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLYRAT---------HVPVGE 153 (355)
Q Consensus 84 f~QS~v-~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~~a~---------~VpVG~ 153 (355)
|+||+. .++.++.|.+++.++++++.+ ..+++++.++|+|+||+|||||||+++++ +||||.
T Consensus 161 ~~qs~~~~~~~~~~~~l~k~~t~~~~k~--------~~~~~~~~n~g~~~YP~lQaaDil~~~~~~~~g~~~~~lVPvG~ 232 (386)
T 3hzr_A 161 YTDYQYFGKMYRTISLVEKATAYNVVQP--------FFNFEYSDNIGKLASPSIMTASMFSQSYSHFFSSPARCLVLDSI 232 (386)
T ss_dssp EEHHHHHHHHHHHHHHHHHHCBHHHHTT--------TSCCCSSSBHHHHHHHHHHHHTTSGGGCTTTCSSCCEEEEEEEG
T ss_pred EEECHHCHHHHHHHHHHHCCCCCCHHHH--------HHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEECCCC
T ss_conf 9825200065899999958735052546--------51676667775204609888888760680541787530305773
Q ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21268999999999998761401100000123211134574314322347564303356774111321345544520014
Q gi|254780794|r 154 DQRQHLEITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLL 233 (355)
Q Consensus 154 DQ~~HieltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~ 233 (355)
||+||+|||||+|+|||.. -|.. ..+..+|||++ .+|||||++ +|+|+|+
T Consensus 233 DQ~~~~~ltRdia~r~~~~------------------------~p~~---i~~~~lpgL~G-~~KMSsS~~--~s~I~L~ 282 (386)
T 3hzr_A 233 KNVQFHSIIDQIATTLNFI------------------------QPTV---LFHKMVPLLSG-VTKFDIPSD--HNSILLS 282 (386)
T ss_dssp GGHHHHHHHHHHHHHHTCC------------------------CCEE---EEECCCCCTTC-TTCCCCCCT--TTSCBTT
T ss_pred CHHHHHHHHHHHHHHCCCC------------------------CCEE---ECCCCCCCCCC-CCCCCCCCC--CCEEEEE
T ss_conf 4599999999999863568------------------------8702---12554456788-765456899--8625750
Q ss_pred CCHHHHHHHHHHHH-CCCCCC---CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHH--HCCCCHHHHHHHHHHHHHHH
Q ss_conf 53889999987520-012233---4643455668763431331122222528889998--67999899989999999998
Q gi|254780794|r 234 DNPDIIAKKIQKAK-TDGDVL---PSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQ--FGGKNFSQFKLALADAVIEE 307 (355)
Q Consensus 234 D~~e~I~kKI~ka~-TDs~~~---~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~~--~g~~~~gdlK~~Lae~I~~~ 307 (355)
|+|++|++||+++. |++..+ ++..+|+++.|.+|+++.+|.. ++.+.+++..+ .|+++||+||+.|+|.|+++
T Consensus 283 D~p~~I~kKI~k~a~sgg~~t~ee~~~~gg~p~~~~v~~~l~~f~~-dd~eleei~~~y~~G~l~~gelK~~lae~i~~~ 361 (386)
T 3hzr_A 283 DNAKQVERKINKLAFSGGRNTTEEHKKLGGQCDIDVSFQLLNIFSS-DNAQVKDVEEKYSKGELLSGELKKIVSASMKDF 361 (386)
T ss_dssp CCHHHHHHHHHHTSCCCCCSSHHHHHTTCCCGGGCHHHHHHHHHCS-CHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 7989998874525327987750333314999752489999998648-876999999999659989899999999999999
Q ss_pred HHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 337999999998279999999999
Q gi|254780794|r 308 IVPISQKIQHLLKDKSYLDTILVE 331 (355)
Q Consensus 308 L~PIRer~~~l~~d~~~v~~IL~~ 331 (355)
|+|+|+||+++.+ +.|++.+..
T Consensus 362 l~~~qerr~~vtd--e~~~~f~~~ 383 (386)
T 3hzr_A 362 IVAYDAKKKPITT--AYLKAYISK 383 (386)
T ss_dssp HHHHHHHHTTCCH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHCC
T ss_conf 9999999997119--999998485