HHsearch results for GI: 254780794 and protein with PDBid: 3jxe_A
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=0 Score=534.36 Aligned_cols=307 Identities=18% Similarity=0.211 Sum_probs=266.2
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCC--CCHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 888789601589678105579889999999850599589997311573078--985899999999999999628681112
Q gi|254780794|r 4 SDNLFVSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNN--IVQENLRYQSRLFVASFLAAGVDPSRN 81 (355)
Q Consensus 4 ~~~~vltG~~PtG~~HLG~y~g~i~~~i~lq~~~~~~~~~~IAD~halt~~--~~~~~~~~~~~~~~~~~lA~Gldp~k~ 81 (355)
.+..|+||++|||++|||||+|+++.| .+|++++++++|+|||+|+++++ .+++++++++++++++|+||||||+|+
T Consensus 72 ~~~~vytG~~PSG~lHLGh~i~~~~~~-~~q~~~~~~~~i~iaD~~~~~~~~~~~~~~~~~~~~e~~~~~lA~GlDp~kt 150 (392)
T 3jxe_A 72 RGFFLYTGRGPSGPMHIGHIIPFFATK-WLQEKFGVNLYIQITDDEKFLFKENLTFDDTKRWAYDNILDIIAVGFDPDKT 150 (392)
T ss_dssp CCCEEEEEECCSSCCBHHHHHHHHHHH-HHHHHHCCEEEEEECHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCCCTTSE
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHHHH-HHHHCCCCCEEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 980899686898374899899999999-9997169866999961277652579999999999999999999808992035
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHC-CCCEEHHHHHHHHHH
Q ss_conf 3652474078899999985105367752012211233201110134664111146654356528-660111212126899
Q gi|254780794|r 82 IIFKQSDVGYHADLSWILSCVARMGWMNNMIQFKEKSKENKEETASLGLFMYPVLMAADILLYR-ATHVPVGEDQRQHLE 160 (355)
Q Consensus 82 ~if~QS~v~e~~eL~~~l~~~~~~~~l~r~~~~k~~~~~~~~~~~~~g~~~YP~lqaADIl~~~-a~~VpVG~DQ~~Hie 160 (355)
+||.||+++++.+|.|.+++.+++++++++.+| .+++++|+|+||+|||||||+++ +++||||.||+||+|
T Consensus 151 ~i~~~s~~~~~~~l~~~l~~~~~~~~~~~~~~~--------~~~~~~g~~~YP~lQaaDil~~~~~~~VPvG~DQ~~h~~ 222 (392)
T 3jxe_A 151 FIFQNSEFTKIYEMAIPIAKKINFSMAKAVFGF--------TEQSKIGMIFFPAIQIAPTFFERKRCLIPAAIDQDPYWR 222 (392)
T ss_dssp EEEETTTSTHHHHHHHHHHHHSBHHHHHHHHCC--------CTTSBHHHHHHHHHHHGGGGSSSSCEEEEEEGGGHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCC--------CCCCCCCCCCCCHHHHCCHHCCCCCEEEECCHHHHHHHH
T ss_conf 999713115778887889851551666531124--------445565544670333232011356706324477789999
Q ss_pred HHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99999999987614011000001232111345743143223475643033567741113213455445200145388999
Q gi|254780794|r 161 ITRLIAQRFNTEFERKIKEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPDIIA 240 (355)
Q Consensus 161 ltRdiA~rfN~~yg~~~~~~~~~~~~~~~~~~~~~~~p~~~i~~~~~ri~~L~~~~~KMSKS~~~~~s~I~l~D~~e~I~ 240 (355)
||||||+|||..++.. + ....+|+|+++++|||+|++ +|+|+|+|+|++|+
T Consensus 223 LtRdia~r~n~~~~~~--------------------~-------~~~~ip~l~G~~gKmssS~~--~s~I~L~D~pe~i~ 273 (392)
T 3jxe_A 223 LQRDFAESLGYYKTAA--------------------L-------HSKFVPSLTSLSGKMSASKP--ETAIYLTDSPEDVE 273 (392)
T ss_dssp HHHHHTGGGTSCCCEE--------------------E-------EECCCCCSSCSSSCCCTTSG--GGCCBTTCCHHHHH
T ss_pred HHHHHHHHCCCCCCCC--------------------C-------CCCCCCCCCCCCCCCCCCCC--CCEEEECCCHHHHH
T ss_conf 9999997527888733--------------------4-------54323356887666654678--88745058999999
Q ss_pred HHHHHHHCCCCCC----CCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9987520012233----46434556687634313311222225288899986--79998999899999999983379999
Q gi|254780794|r 241 KKIQKAKTDGDVL----PSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQF--GGKNFSQFKLALADAVIEEIVPISQK 314 (355)
Q Consensus 241 kKI~ka~TDs~~~----~~~~~~~~~~~~v~~Ll~ifs~~~~~~~~e~~~~~--g~~~~gdlK~~Lae~I~~~L~PIRer 314 (355)
+|||+++||++.. ++..+|+|+.|.+++|+.+|...++.+.+++...| |+++||+||+.|++.|+++|+|+|||
T Consensus 274 ~KI~k~~~~~g~~~~~e~~~~~g~p~~~~v~~~l~~f~~~d~~~l~e~~~~y~~G~l~~ge~K~~lae~l~~~l~~~~er 353 (392)
T 3jxe_A 274 KKVWKFTLTGGRPTLKEQREKGGEPEKCVVFKWLEIFFEEDDKKLKERYYACKNGELTCGECKRYLISKIQEFLKEHQRR 353 (392)
T ss_dssp HHHHTCC--------------------CHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99974137899860001100368843347999999873899999999999875489898999999999999998999999
Q ss_pred HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999827999999999999999999999999999
Q gi|254780794|r 315 IQHLLKDKSYLDTILVEGANRARCRAQETMKYVN 348 (355)
Q Consensus 315 ~~~l~~d~~~v~~IL~~Ga~kAr~~A~~tl~~Vr 348 (355)
|+++.+..+.+..+++.|+++|+++|.+||++.-
T Consensus 354 r~~~~~~~~~~~~~~k~~~e~A~~~~~e~l~r~~ 387 (392)
T 3jxe_A 354 RKKAEKLVEKFKYTGKLAQEMWNEAIPEPLKRSH 387 (392)
T ss_dssp HHHHTTSHHHHHTTSHHHHHHHTTSCCC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999983999999999999999999999999850