RPSBLAST alignment of GI: 254780794 and protein with PDBid: 3hzr

>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural genomics of pathogenic protozoa, MSGPP; 3.00A {Entamoeba histolytica} Length = 386

 Score =  165 bits (418), Expect = 2e-41
 Identities = 49/338 (14%), Positives = 97/338 (28%), Gaps = 59/338 (17%)

Query: 9   VSGVQPTGVLHLGNYLGMIRNVIRRQETCNHLGMYFIADLHAITNN-IVQENLRYQSRLF 67
                P   + L  Y+ +       Q+  N   +  I D   + N           S   
Sbjct: 86  FIQKYPQKEVALEEYITLEFAR-YLQDAFNIQVIIQILDDIKVLNREATINEASKMSNDL 144

Query: 68  VASFLAAGVDPSRNIIFKQSD-VGYHADLSWILSCVARMGWMNNMIQFKEKSKENKEETA 126
           +   LA G +  +  I+      G       ++        +     F+           
Sbjct: 145 MKYILAFGFNEDKTFIYTDYQYFGKMYRTISLVEKATAYNVVQPFFNFEYSD-------- 196

Query: 127 SLGLFMYPVLMAADILLYRATH---------VPVGEDQRQHLEITRLIAQRFNTEFERKI 177
           ++G    P +M A +     +H         V       Q   I   IA   N      +
Sbjct: 197 NIGKLASPSIMTASMFSQSYSHFFSSPARCLVLDSIKNVQFHSIIDQIATTLNFIQPTVL 256

Query: 178 KEVAQKYAQEEQYSKGFFPIIEGLIDSSASRIRSLRDASKKMSKSDSSDFSRINLLDNPD 237
                                         ++  L     K      SD + I L DN  
Sbjct: 257 F----------------------------HKMVPLLSGVTKFDI--PSDHNSILLSDNAK 286

Query: 238 IIAKKIQKAKTDGD----VLPSEVSGLENRLEAKNLIEIFATMRQIKIEEALKQF--GGK 291
            + +KI K    G         ++ G  +   +  L+ IF++    ++++  +++  G  
Sbjct: 287 QVERKINKLAFSGGRNTTEEHKKLGGQCDIDVSFQLLNIFSSDNA-QVKDVEEKYSKGEL 345

Query: 292 NFSQFKLALADAVIEEIVPISQKIQHLLKDKSYLDTIL 329
              + K  ++ ++ + IV    K + +     YL   +
Sbjct: 346 LSGELKKIVSASMKDFIVAYDAKKKPITTA--YLKAYI 381