HHsearch alignment for GI: 254780795 and conserved domain: PRK01723
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed.
Probab=99.42 E-value=3.9e-12 Score=98.19 Aligned_cols=166 Identities=24% Similarity=0.408 Sum_probs=101.8
Q ss_pred EEECCCCCEEEEEEEEECCCCEEEEEECCC-----CCH----------HHHHHHHHHHHHHHHCCCCCCCCCCCC---HH
Q ss_conf 100466812001799943995899982166-----998----------899999999999853267755510010---26
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTSKGTFILTIYEKR-----MNE----------KDLPVFIELLHYISRNKLPCPIPIPRN---DG 88 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~~~~yiLri~e~~-----~~~----------~~l~~~~~ll~~L~~~gipvP~pi~~~---~G 88 (316)
T Consensus 39 i~g~a~G-RGttwFv~~~~~~~vLRHY~RGGl~~k~~~D~Y~f~g~~~TRs~~Ef~LL~~L~~~glpVP~PvAa~v~r~g 117 (240)
T PRK01723 39 VVGSAKG-RGTTWFVQTEDGNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 117 (240)
T ss_pred CCCCCCC-CEEEEEEECCCCCEEEECCCCCCCHHHCCCCCEECCCHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHEECC
T ss_conf 1103787-605899982897777540324660100134343317756554899999999999879999817777703236
Q ss_pred HHHHHHCCCCEEEEECCCCCC-C------CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH
Q ss_conf 778752245155786478870-7------689989999999986436753068754332311245645766752001552
Q gi|254780795|r 89 KLYGFLCKKPANIFSFIKGSP-L------NHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDE 161 (316)
Q Consensus 89 ~~~~~~~~k~~~L~~~i~G~~-~------~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~ 161 (316)
T Consensus 118 ~~Y-----~Adiite~I~~a~~L~~~L~~~~l~~~~w~~iG~~I~~fH~------------------------------- 161 (240)
T PRK01723 118 LFY-----RADILIERIEGARDLVALLQEGPLSEEQWQAIGRLIARFHD------------------------------- 161 (240)
T ss_pred EEE-----EHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH-------------------------------
T ss_conf 278-----83565635689704899985089988999999999999997-------------------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECC-CCCEEEECCCCCCCCHHHC-----CHHHHHHHHHH---CC
Q ss_conf 278899999998887652107774440223464225627-9604873162135680001-----98999986431---16
Q gi|254780795|r 162 DLKKEIDHEFCFLKESWPKNLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSCNDFLMY-----DLSICINAWCF---DE 232 (316)
Q Consensus 162 ~~~~~l~~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~~~~~i~-----DLAi~i~~~c~---~~ 232 (316)
T Consensus 162 ----------------------~gV~H~DLN~~NILid~~~~vw-lIDFDk~~~~~~~~~Wk~~NL~RL~RSl~Ke~~~~ 218 (240)
T PRK01723 162 ----------------------AGVYHADLNAHNILLDAGGKFW-LIDFDRGELRTPATRWKQANLARLLRSFNKEQGKR 218 (240)
T ss_pred ----------------------CCCCCCCCCHHHEEECCCCCEE-EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf ----------------------4897666674416787999889-99886303368864488999999999899875225
Q ss_pred CCCCCHHHHHHHHHHHHHCC
Q ss_conf 88878788999998876418
Q gi|254780795|r 233 NNTYNPSRGFSILNGYNKVR 252 (316)
Q Consensus 233 ~~~~d~~~~~~~l~gY~~vr 252 (316)
T Consensus 219 ~~~~~e~~W~~Ll~gY~~a~ 238 (240)
T PRK01723 219 PIHFSEQNWQALLAGYQAAW 238 (240)
T ss_pred CCCCCHHHHHHHHHHHHHHH
T ss_conf 78878889999999999975