HHsearch alignment for GI: 254780795 and conserved domain: PRK12396

>PRK12396 5-methylribose kinase; Reviewed.
Probab=99.26  E-value=3.5e-10  Score=85.52  Aligned_cols=214  Identities=15%  Similarity=0.188  Sum_probs=125.1

Q ss_pred             CCCCCCCCHHHHHHHHHHC----CCCCEEEEEECCCCCEEEEEEEEECCC--CEEEE-------EECC-CCCHHHHHHHH
Q ss_conf             9657708999999999848----998605310046681200179994399--58999-------8216-69988999999
Q gi|254780795|r    1 MAVYTHPPQKEIQSFVQEY----AIGQLNSVQPIIHGVENSNFVIQTSKG--TFILT-------IYEK-RMNEKDLPVFI   66 (316)
Q Consensus         1 MaVyt~ls~~el~~il~~y----~lg~~~~~~~i~~G~~Ntny~v~t~~~--~yiLr-------i~e~-~~~~~~l~~~~   66 (316)
T Consensus         4 ~~~y~~l~~~~~i~Y~k~~~~~f~~~~~l~~~EIGDGNLN~Vf~V~~~~~~~svivKQAlpyvRv~~~wpL~~~R~~~E~   83 (409)
T PRK12396          4 FTKYFLMEANDVIVYVKEKLCKFEHAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIES   83 (409)
T ss_pred             HHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHH
T ss_conf             35411076736999999826879998885368974785689999970898717999816760366689888866899999


Q ss_pred             HHHHHHHHCCCC--CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC-------CCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             999998532677--55510010267787522451557864788707-------689989999999986436753068754
Q gi|254780795|r   67 ELLHYISRNKLP--CPIPIPRNDGKLYGFLCKKPANIFSFIKGSPL-------NHISDIHCEEIGSMLASMHQKTKNFHL  137 (316)
Q Consensus        67 ~ll~~L~~~gip--vP~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~-------~~~~~~~~~~lG~~La~lH~~~~~f~~  137 (316)
T Consensus        84 ~aL~~~~~~-~P~~vP~vy~~D~--------~~~~~vMEdLs~~~ilR~~Li~g~~~p~la~~ig~flA~Tlf~tSd~~l  154 (409)
T PRK12396         84 DVLQLEEEL-APGLVPKVYLFDS--------VMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVM  154 (409)
T ss_pred             HHHHHHHHH-CCCCCCEEEEECH--------HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             999998856-8876774887661--------7866757754402559999877886730899999999998851253336


Q ss_pred             CCCCCCCHH--HHHHHHHHH----------HHC-----CCHH----HHH------HHHHHHHHHHHHHHHCCCCCEEECC
Q ss_conf             332311245--645766752----------001-----5522----788------9999999888765210777444022
Q gi|254780795|r  138 YRKNTLSPL--NLKFLWAKC----------FDK-----VDED----LKK------EIDHEFCFLKESWPKNLPTGIIHAD  190 (316)
Q Consensus       138 ~r~~~~~~~--~~~~~~~~~----------~~~-----~~~~----~~~------~l~~~l~~~~~~~~~~Lp~g~IHgD  190 (316)
T Consensus       155 ~~~~kK~~v~~f~N~eLc~ITEdlVFTdPy~~~~~~n~~~~~~~~~v~~~l~~D~~Lk~eva~LK~~Fm-t~aeaLlHGD  233 (409)
T PRK12396        155 NHKEKKELVKNYINPELCEITEDLVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRIEVAKLKFSFM-TNAQALIHGD  233 (409)
T ss_pred             CHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCHHHHCCC
T ss_conf             879999998853996776545653637776454447788854649999998509999999999999875-2002443267


Q ss_pred             CCCCCEEECCCCCEEEECCCCCCCCHHHCCHHHHH
Q ss_conf             34642256279604873162135680001989999
Q gi|254780795|r  191 LFPDNVLFYNNKIMGLIDFYFSCNDFLMYDLSICI  225 (316)
Q Consensus       191 l~~~NiL~~~~~i~giIDF~~~~~~~~i~DLAi~i  225 (316)
T Consensus       234 LHTGSImv~~~~tk-VIDpEFAFYGPmGFDiG~~i  267 (409)
T PRK12396        234 LHTGSVFVKNDSTK-VIDPEFAFYGPMGYDIGNVM  267 (409)
T ss_pred             CCCCCEEEECCCCE-EECCHHHCCCCCHHHHHHHH
T ss_conf             55675686078415-87620321687410099999