HHsearch alignment for GI: 254780795 and conserved domain: PRK12396
>PRK12396 5-methylribose kinase; Reviewed.
Probab=99.26 E-value=3.5e-10 Score=85.52 Aligned_cols=214 Identities=15% Similarity=0.188 Sum_probs=125.1
Q ss_pred CCCCCCCCHHHHHHHHHHC----CCCCEEEEEECCCCCEEEEEEEEECCC--CEEEE-------EECC-CCCHHHHHHHH
Q ss_conf 9657708999999999848----998605310046681200179994399--58999-------8216-69988999999
Q gi|254780795|r 1 MAVYTHPPQKEIQSFVQEY----AIGQLNSVQPIIHGVENSNFVIQTSKG--TFILT-------IYEK-RMNEKDLPVFI 66 (316)
Q Consensus 1 MaVyt~ls~~el~~il~~y----~lg~~~~~~~i~~G~~Ntny~v~t~~~--~yiLr-------i~e~-~~~~~~l~~~~ 66 (316)
T Consensus 4 ~~~y~~l~~~~~i~Y~k~~~~~f~~~~~l~~~EIGDGNLN~Vf~V~~~~~~~svivKQAlpyvRv~~~wpL~~~R~~~E~ 83 (409)
T PRK12396 4 FTKYFLMEANDVIVYVKEKLCKFEHAKGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIES 83 (409)
T ss_pred HHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCEEEEEEECCCCEEECCCCCCCHHHHHHHH
T ss_conf 35411076736999999826879998885368974785689999970898717999816760366689888866899999
Q ss_pred HHHHHHHHCCCC--CCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC-------CCCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999998532677--55510010267787522451557864788707-------689989999999986436753068754
Q gi|254780795|r 67 ELLHYISRNKLP--CPIPIPRNDGKLYGFLCKKPANIFSFIKGSPL-------NHISDIHCEEIGSMLASMHQKTKNFHL 137 (316)
Q Consensus 67 ~ll~~L~~~gip--vP~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~-------~~~~~~~~~~lG~~La~lH~~~~~f~~ 137 (316)
T Consensus 84 ~aL~~~~~~-~P~~vP~vy~~D~--------~~~~~vMEdLs~~~ilR~~Li~g~~~p~la~~ig~flA~Tlf~tSd~~l 154 (409)
T PRK12396 84 DVLQLEEEL-APGLVPKVYLFDS--------VMNCCVMEDLSDHTILRTALINHEIFPRLADDLTTFLVNTLLLTSDVVM 154 (409)
T ss_pred HHHHHHHHH-CCCCCCEEEEECH--------HHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 999998856-8876774887661--------7866757754402559999877886730899999999998851253336
Q ss_pred CCCCCCCHH--HHHHHHHHH----------HHC-----CCHH----HHH------HHHHHHHHHHHHHHHCCCCCEEECC
Q ss_conf 332311245--645766752----------001-----5522----788------9999999888765210777444022
Q gi|254780795|r 138 YRKNTLSPL--NLKFLWAKC----------FDK-----VDED----LKK------EIDHEFCFLKESWPKNLPTGIIHAD 190 (316)
Q Consensus 138 ~r~~~~~~~--~~~~~~~~~----------~~~-----~~~~----~~~------~l~~~l~~~~~~~~~~Lp~g~IHgD 190 (316)
T Consensus 155 ~~~~kK~~v~~f~N~eLc~ITEdlVFTdPy~~~~~~n~~~~~~~~~v~~~l~~D~~Lk~eva~LK~~Fm-t~aeaLlHGD 233 (409)
T PRK12396 155 NHKEKKELVKNYINPELCEITEDLVYAEPFTNHNKRNELFPLNEGWIREHIYSDKELRIEVAKLKFSFM-TNAQALIHGD 233 (409)
T ss_pred CHHHHHHHHHHCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCHHHHCCC
T ss_conf 879999998853996776545653637776454447788854649999998509999999999999875-2002443267
Q ss_pred CCCCCEEECCCCCEEEECCCCCCCCHHHCCHHHHH
Q ss_conf 34642256279604873162135680001989999
Q gi|254780795|r 191 LFPDNVLFYNNKIMGLIDFYFSCNDFLMYDLSICI 225 (316)
Q Consensus 191 l~~~NiL~~~~~i~giIDF~~~~~~~~i~DLAi~i 225 (316)
T Consensus 234 LHTGSImv~~~~tk-VIDpEFAFYGPmGFDiG~~i 267 (409)
T PRK12396 234 LHTGSVFVKNDSTK-VIDPEFAFYGPMGYDIGNVM 267 (409)
T ss_pred CCCCCEEEECCCCE-EECCHHHCCCCCHHHHHHHH
T ss_conf 55675686078415-87620321687410099999