HHsearch alignment for GI: 254780795 and conserved domain: TIGR02904
>TIGR02904 spore_ysxE spore coat protein YsxE; InterPro: IPR014253 Members of this entry, which includes the Bacillus subtilis protein YsxE, are found only in the family Bacillaceae, part of the the endospore-forming group within the Firmicutes. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat and is a homologue of CotS (IPR014255 from INTERPRO)..
Probab=99.72 E-value=7.8e-16 Score=122.13 Aligned_cols=245 Identities=15% Similarity=0.188 Sum_probs=162.0
Q ss_pred HHHHHHHCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCC-CCCCHHHH
Q ss_conf 99999848998605310046681200179994399589998216699889999999999985326775551-00102677
Q gi|254780795|r 12 IQSFVQEYAIGQLNSVQPIIHGVENSNFVIQTSKGTFILTIYEKRMNEKDLPVFIELLHYISRNKLPCPIP-IPRNDGKL 90 (316)
Q Consensus 12 l~~il~~y~lg~~~~~~~i~~G~~Ntny~v~t~~~~yiLri~e~~~~~~~l~~~~~ll~~L~~~gipvP~p-i~~~~G~~ 90 (316)
T Consensus 1 ~~~vL~~Y~l-~P~~~E~V----~~k~~kvytd~G~fALK~~~--~~~~~~~~f~~~~~~L~~kg~~~~vPvY~t~~G~y 73 (313)
T TIGR02904 1 YEAVLEQYGL-QPEEMEQV----TGKLVKVYTDQGVFALKKLE--ADRNTVEEFVSQIQVLKEKGFSRIVPVYPTKDGEY 73 (313)
T ss_pred CCHHHHHCCC-CCCCEEEE----CCCEEEEECCCCCCCCCHHH--HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCH
T ss_conf 9112523278-83101454----16389987689864255437--77878999999999998768984200000376203
Q ss_pred HHHHCCCCEEEEECCC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC-------------CCCHHHHHHHHHHHH
Q ss_conf 8752245155786478-87076899899999999864367530687543323-------------112456457667520
Q gi|254780795|r 91 YGFLCKKPANIFSFIK-GSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKN-------------TLSPLNLKFLWAKCF 156 (316)
Q Consensus 91 ~~~~~~k~~~L~~~i~-G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~-------------~~~~~~~~~~~~~~~ 156 (316)
T Consensus 74 ~~~~g~~~YYLmPW~~r~e~~~~-~~~~~~~~f~~La~lH~~T~kt~~~~~E~~~~~ye~~~~~W~~~~~~~e~fi~~~E 152 (313)
T TIGR02904 74 LLFAGEKLYYLMPWLDREERKEE-RNEQHEKMFRELALLHRKTVKTEEVTEEELKKHYERTKSRWEREKEVLEEFIVEAE 152 (313)
T ss_pred HHHCCCCCCCCCHHHHCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22224522344302311555465-67899999999999866643110112888888888778875101779999999998
Q ss_pred H--CCCHHH-------------HHHHHHHHHHHHHHH--HHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCCCHHHC
Q ss_conf 0--155227-------------889999999888765--21077744402234642256279604873162135680001
Q gi|254780795|r 157 D--KVDEDL-------------KKEIDHEFCFLKESW--PKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCNDFLMY 219 (316)
Q Consensus 157 ~--~~~~~~-------------~~~l~~~l~~~~~~~--~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~~~~i~ 219 (316)
T Consensus 153 ~~~YMSPFeL~~c~yY~~v~~A~~fa~~~L~~W~E~~~e~~~~R~~l~HGkls~~H~l~~~~~~gYf~nfE~A~~~~P~~ 232 (313)
T TIGR02904 153 AKWYMSPFELQACTYYHEVMRAAEFAKNKLEDWHEATKEKESARTVLVHGKLSLSHFLYDETREGYFINFEKASFASPLT 232 (313)
T ss_pred HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHEEEECCCCCCEEHHHHHCCCCCHH
T ss_conf 52288858999999877899999999988889987522003131000326535212003138896410044323699677
Q ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 98999986431168887878899999887641889989999999999
Q gi|254780795|r 220 DLSICINAWCFDENNTYNPSRGFSILNGYNKVRKISENELQSLPTLL 266 (316)
Q Consensus 220 DLAi~i~~~c~~~~~~~d~~~~~~~l~gY~~vrpLs~~E~~~l~~ll 266 (316)
T Consensus 233 Dl~~f~~r-~~-~~~p~~~~E~~~w~~~Y~k~~PL~~~E~~Ll~syL 277 (313)
T TIGR02904 233 DLIAFFRR-SL-KTYPVEEDEVVEWLYTYEKELPLTDEEILLLLSYL 277 (313)
T ss_pred HHHHHHHH-HH-HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf 89999998-75-01785057899998887732796377899999985