HHsearch alignment for GI: 254780795 and conserved domain: cd00180
>cd00180 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases of the serine or threonine-specific kinase subfamily. The enzymatic activity of these protein kinases is controlled by phosphorylation of specific residues in the activation segment of the catalytic domain, sometimes combined with reversible conformational changes in the C-terminal autoregulatory tail.
Probab=97.90 E-value=0.00032 Score=46.98 Aligned_cols=137 Identities=19% Similarity=0.279 Sum_probs=74.9
Q ss_pred EECCCCCEEEEEEEEE-CCC-CEEEEEECCC-CCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf 0046681200179994-399-5899982166-9988---99999999999853267755510010267787522451557
Q gi|254780795|r 28 QPIIHGVENSNFVIQT-SKG-TFILTIYEKR-MNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI 101 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~-~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L 101 (316)
T Consensus 6 ~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H-----pnIv~~~~---~~~~~~~~~iv 77 (256)
T cd00180 6 EKLGKGAFGKVYLARDKKTGELVAIKIIKKKKEKKKQVERILREIKILKRLNH-----PNIVKLYD---VFEDEDKLYLV 77 (256)
T ss_pred EEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCC-----CCCCCEEE---EEEECCEEEEE
T ss_conf 89841878499999998999899999983344898999999999999997799-----69995999---99989999999
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 86478870768998999999998643675306875433231124564576675200155227889999999888765210
Q gi|254780795|r 102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKN 181 (316)
Q Consensus 102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 181 (316)
T Consensus 78 mEy~~gg~L~~~-----------i---~~~-~~l~--------~~~~------------~~i~~qi~~aL~ylH~----- 117 (256)
T cd00180 78 MEYMSGGDLFDL-----------L---KKR-GRLS--------EDEA------------RFYFRQILSGLEYLHS----- 117 (256)
T ss_pred EECCCCCCHHHH-----------H---HHC-CCCC--------HHHH------------HHHHHHHHHHHHHHHH-----
T ss_conf 978899868999-----------9---876-9999--------9999------------9999999999999998-----
Q ss_pred CCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 777444022346422562796048731621356
Q gi|254780795|r 182 LPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316)
Q Consensus 182 Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316)
T Consensus 118 --~~iiHRDiKp~NILl~~~~~vKL~DFGla~~ 148 (256)
T cd00180 118 --KGIIHRDLKPENILLDEDGHVKIADFGLAKQ 148 (256)
T ss_pred --CCCEEEECCHHHEEECCCCCEEEEECCCCEE
T ss_conf --9967744577987998999899997888657