HHsearch alignment for GI: 254780795 and conserved domain: cd05039

>cd05039 PTKc_Csk_like Catalytic Domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=97.25  E-value=0.0041  Score=39.75  Aligned_cols=140  Identities=11%  Similarity=0.152  Sum_probs=75.7

Q ss_pred             EECCCCCEEEEEEEEECCCCEEEEEECCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCC
Q ss_conf             00466812001799943995899982166-99889999999999985326775551001026778752245155786478
Q gi|254780795|r   28 QPIIHGVENSNFVIQTSKGTFILTIYEKR-MNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFIK  106 (316)
Q Consensus        28 ~~i~~G~~Ntny~v~t~~~~yiLri~e~~-~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i~  106 (316)
T Consensus        12 ~~iG~G~fg~Vy~g~~~g~~VAiK~~~~~~~~~~~f~~E~~~l~~l~H-----pNIv~~~-g--~~~~~~~~~iV~Ey~~   83 (256)
T cd05039          12 ATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRH-----PNLVQLL-G--VVLQGNPLYIVTEYMA   83 (256)
T ss_pred             EEEEECCCEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC-----CCEEEEE-E--EEEECCEEEEEEECCC
T ss_conf             399208980899999999199999988886569999999999985899-----8882088-8--9988999999997589


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
Q ss_conf             87076899899999999864367530687543323112456457667520015522788999999988876521077744
Q gi|254780795|r  107 GSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPTGI  186 (316)
Q Consensus       107 G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~g~  186 (316)
T Consensus        84 ~gsL~~-----~---------l~~~~-------~~~l~---~~~~~---------~i~~~ia~gl~yLH~-------~~i  123 (256)
T cd05039          84 KGSLVD-----Y---------LRSRG-------RAVIT---LAQQL---------GFALDVCEGMEYLEE-------KNF  123 (256)
T ss_pred             CCCHHH-----H---------HHHCC-------CCCCC---HHHHH---------HHHHHHHHHHHHHHH-------CCC
T ss_conf             997899-----9---------97548-------98999---99999---------999999999999975-------893


Q ss_pred             EECCCCCCCEEECCCCCEEEECCCCCCCC
Q ss_conf             40223464225627960487316213568
Q gi|254780795|r  187 IHADLFPDNVLFYNNKIMGLIDFYFSCND  215 (316)
Q Consensus       187 IHgDl~~~NiL~~~~~i~giIDF~~~~~~  215 (316)
T Consensus       124 iHrDlK~~NiLl~~~~~~Kl~DFGls~~~  152 (256)
T cd05039         124 VHRDLAARNVLVSEDLVAKVSDFGLAKEA  152 (256)
T ss_pred             EECCCCCCEEEECCCCCEEEEECCCCEEC
T ss_conf             32546751388899994899305467006