HHsearch alignment for GI: 254780795 and conserved domain: cd05041
>cd05041 PTKc_Fes_like Catalytic Domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=97.47 E-value=0.0038 Score=40.01 Aligned_cols=136 Identities=16% Similarity=0.162 Sum_probs=72.8
Q ss_pred ECCCCCEEEEEEEEECCC-CEEEEEECCCCCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEC
Q ss_conf 046681200179994399-589998216699889---9999999999853267755510010267787522451557864
Q gi|254780795|r 29 PIIHGVENSNFVIQTSKG-TFILTIYEKRMNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSF 104 (316)
Q Consensus 29 ~i~~G~~Ntny~v~t~~~-~yiLri~e~~~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~ 104 (316)
T Consensus 2 ~lG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~-----HpnIv~~~-g--~~~~~~~~~lvmEy 73 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGKTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD-----HPNIVKLI-G--VCVQKQPIYIVMEL 73 (251)
T ss_pred CCCCCCCCEEEEEEECCCCEEEEEEECHHCCHHHHHHHHHHHHHHHHCC-----CCCEEEEE-E--EEEECCEEEEEEEC
T ss_conf 7758988489999999998999999862049789999999999998589-----99888897-8--99579989999984
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 78870768998999999998643675306875433231124564576675200155227889999999888765210777
Q gi|254780795|r 105 IKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPT 184 (316)
Q Consensus 105 i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~ 184 (316)
T Consensus 74 ~~~G~L~~--------------~l~~~~~~~--------~---~~~~---------~~i~~~ia~gl~yLH~-------~ 112 (251)
T cd05041 74 VPGGSLLT--------------FLRKKKNRL--------T---VKKL---------LQMSLDAAAGMEYLES-------K 112 (251)
T ss_pred CCCCCHHH--------------HHHHCCCCC--------C---HHHH---------HHHHHHHHHHHHHHHH-------C
T ss_conf 79996899--------------997357999--------9---9999---------9999999999998832-------8
Q ss_pred CEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 44402234642256279604873162135
Q gi|254780795|r 185 GIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 185 g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 113 ~ivHrDlKp~NiLl~~~~~~Kl~DFGla~ 141 (251)
T cd05041 113 NCIHRDLAARNCLVGENNVLKISDFGMSR 141 (251)
T ss_pred CCCCCCCCHHHEEECCCCCEEEEECCCCC
T ss_conf 95278615400898899918981658860