HHsearch alignment for GI: 254780795 and conserved domain: cd05073
>cd05073 PTKc_Hck Catalytic Domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=97.02 E-value=0.026 Score=34.53 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=75.6
Q ss_pred EEECCCCCEEEEEEEEECCC-CEEEEEECCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEEC
Q ss_conf 10046681200179994399-5899982166-998899999999999853267755510010267787522451557864
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTSKG-TFILTIYEKR-MNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSF 104 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~~~-~yiLri~e~~-~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~ 104 (316)
T Consensus 11 ~~~iG~G~fG~Vy~~~~~~~~~VAvK~l~~~~~~~~~f~~E~~~l~~l~H-----pniv~~-~~~---~~~~~~~lv~Ey 81 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH-----DKLVKL-HAV---VTKEPIYIITEF 81 (260)
T ss_pred EEEEECCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC-----CCEEEE-EEE---EECCCEEEEEEE
T ss_conf 23994178869999998999999999985676789999999999986899-----888649-999---946953999991
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 78870768998999999998643675306875433231124564576675200155227889999999888765210777
Q gi|254780795|r 105 IKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPT 184 (316)
Q Consensus 105 i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~ 184 (316)
T Consensus 82 ~~~GsL~-----------~~l---~~~-~~------~~~~---~~~~~---------~~~~qia~gl~yLH~-------~ 121 (260)
T cd05073 82 MAKGSLL-----------DFL---KSD-EG------SKQP---LPKLI---------DFSAQIAEGMAFIEQ-------R 121 (260)
T ss_pred CCCCCHH-----------HHH---HHC-CC------CCCC---HHHHH---------HHHHHHHHHHHHHHH-------C
T ss_conf 6998999-----------998---636-67------7789---99999---------999999999999986-------9
Q ss_pred CEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 44402234642256279604873162135
Q gi|254780795|r 185 GIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 185 g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 122 ~iiHrDlKp~NiLl~~~~~~Kl~DFGls~ 150 (260)
T cd05073 122 NYIHRDLRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred CCCCCCCCCCEEEECCCCCEEEEECCCCE
T ss_conf 92667677200788699878998568865