HHsearch alignment for GI: 254780795 and conserved domain: cd05089
>cd05089 PTKc_Tie1 Catalytic Domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=94.06 E-value=0.034 Score=33.83 Aligned_cols=150 Identities=19% Similarity=0.149 Sum_probs=69.5
Q ss_pred ECCCCCEEEEEEEEEC-CCC---EEEEEECCCCCH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf 0466812001799943-995---899982166998---899999999999853267755510010267787522451557
Q gi|254780795|r 29 PIIHGVENSNFVIQTS-KGT---FILTIYEKRMNE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI 101 (316)
Q Consensus 29 ~i~~G~~Ntny~v~t~-~~~---yiLri~e~~~~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L 101 (316)
T Consensus 9 ~IG~G~fG~Vyk~~~~~~g~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~H----pnIV~l~-g--~~~~~~~~~iV 81 (297)
T cd05089 9 VIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHH----PNIINLL-G--ACENRGYLYIA 81 (297)
T ss_pred EEEECCCCEEEEEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC----CCEEEEE-E--EECCCCEEEEE
T ss_conf 995178959999999379809999999977335847899999999999871289----9888886-7--98239878999
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-CCCCC-CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 86478870768998999999998643675306875-43323-11245645766752001552278899999998887652
Q gi|254780795|r 102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFH-LYRKN-TLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~-~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 82 ~Ey~~~G~L~~~-----------l~~-~~~~~~~~~~~~~~~~~~~l~~~~~l---------~i~~qia~gl~yLH---- 136 (297)
T cd05089 82 IEYAPYGNLLDF-----------LRK-SRVLETDPAFAKEHGTASTLTSQQLL---------QFASDVATGMQYLS---- 136 (297)
T ss_pred EECCCCCCHHHH-----------HHH-CCCCCCCCHHHHHCCCCCCCCHHHHH---------HHHHHHHHHHHHHH----
T ss_conf 970599879999-----------973-56554461022203665778999999---------99999999999884----
Q ss_pred HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 1077744402234642256279604873162135
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 137 ---~~~IiHRDLKp~NILl~~~~~~KI~DFGls~ 167 (297)
T cd05089 137 ---EKQFIHRDLAARNVLVGENLASKIADFGLSR 167 (297)
T ss_pred ---CCCCCCCCCCHHEEEECCCCCEEEEECCCCC
T ss_conf ---0991557566422899899988980156786