>cd05090 PTKc_Ror1 Catalytic Domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like orphan receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

Probab=96.56 E-value=0.053 Score=32.56 Aligned_cols=153 Identities=10% Similarity=0.104 Sum_probs=73.5 Q ss_pred CEEEEEECCCCCEEEEEEEEE-----CCCCEE-EEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH Q ss_conf 605310046681200179994-----399589-99821669988---999999999998532677555100102677875 Q gi|254780795|r 23 QLNSVQPIIHGVENSNFVIQT-----SKGTFI-LTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGF 93 (316) Q Consensus 23 ~~~~~~~i~~G~~Ntny~v~t-----~~~~yi-Lri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~ 93 (316) T Consensus 6 ~~~~~~~IG~G~fG~Vykg~~~~~~~~~~~~VAiK~l~~~~~~~~~~~f~~E~~~l~~l~HpNI-----V~l~-g--~~~ 77 (283) T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI-----VCLL-G--VVT 77 (283) T ss_pred HEEEEEEEECCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC-----CEEE-E--EEE T ss_conf 9299879704858699999994788858889999997887897899999999999986689896-----8599-9--998 Q ss_pred HCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCH----HHHHHHH Q ss_conf 2245155786478870768998999999998643675-3068754332311245645766752001552----2788999 Q gi|254780795|r 94 LCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQ-KTKNFHLYRKNTLSPLNLKFLWAKCFDKVDE----DLKKEID 168 (316) Q Consensus 94 ~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~-~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~ 168 (316) T Consensus 78 ~~~~~~iv~Ey~~~G~L~~-----~------L~~~~~~~~~~~~~~~------------~~~~~~~l~~~~~~~i~~qia 134 (283) T cd05090 78 QEQPVCMLFEYLNQGDLHE-----F------LIMRSPHSDVGCSSDE------------DGTVKSSLDHGDFLHIAIQIA 134 (283) T ss_pred ECCEEEEEEEECCCCCHHH-----H------HHHCCCCCCCCCCCCC------------CCCCCCCCCHHHHHHHHHHHH T ss_conf 8997799999459990899-----9------9750765433333222------------332135789999999999999 Q ss_pred HHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC Q ss_conf 999988876521077744402234642256279604873162135 Q gi|254780795|r 169 HEFCFLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316) Q Consensus 169 ~~l~~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316) T Consensus 135 ~gl~yLH~-------~~iiHrDlKp~NiLl~~~~~~Kl~DFGla~ 172 (283) T cd05090 135 AGMEYLSS-------HFFVHKDLAARNILIGEQLHVKISDLGLSR 172 (283) T ss_pred HHHHHHHH-------CCEECCCCCHHHEEECCCCCEEEEECCCCE T ss_conf 99999844-------985645048412768899989998166772

HHsearch alignment for GI: 254780795 and conserved domain: cd05090