HHsearch alignment for GI: 254780795 and conserved domain: cd05101

>cd05101 PTKc_FGFR2 Catalytic Domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=93.13  E-value=0.048  Score=32.86  Aligned_cols=152  Identities=18%  Similarity=0.231  Sum_probs=69.6

Q ss_pred             EEECCCCCEEEEEEEEE---CC--C----CEEEEEECCCCCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf             10046681200179994---39--9----589998216699889---999999999985326775551001026778752
Q gi|254780795|r   27 VQPIIHGVENSNFVIQT---SK--G----TFILTIYEKRMNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFL   94 (316)
Q Consensus        27 ~~~i~~G~~Ntny~v~t---~~--~----~yiLri~e~~~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~   94 (316)
T Consensus        20 ~~~lG~G~FG~Vy~a~~~g~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~~l~~l~~H----pNIV~~~-g~--~~~   92 (304)
T cd05101          20 GKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH----KNIINLL-GA--CTQ   92 (304)
T ss_pred             CCEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC----CCEEEEE-EE--EEE
T ss_conf             3689316471999989806667777500699999978657989999999999999851489----9973799-99--998


Q ss_pred             CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             2451557864788707689989999999986436753068--75433231124564576675200155227889999999
Q gi|254780795|r   95 CKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKN--FHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFC  172 (316)
Q Consensus        95 ~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~--f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  172 (316)
T Consensus        93 ~~~~~iv~Ey~~~GsL~~-----------~l~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~-----~~~~qia~gl~  151 (304)
T cd05101          93 DGPLYVIVEYASKGNLRE-----------YLRARRPPGMEYSYDIARVPDE-----QMTFKDLV-----SCTYQVARGME  151 (304)
T ss_pred             CCEEEEEEECCCCCCHHH-----------HHHHCCCCCCCCCCHHHCCCCC-----CCCHHHHH-----HHHHHHHHHHH
T ss_conf             998999998179998999-----------9986388642210011026422-----36899999-----99999999999


Q ss_pred             HHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             88876521077744402234642256279604873162135
Q gi|254780795|r  173 FLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       173 ~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       152 yLH~-------~~iiHRDLK~~NiLl~~~~~~Ki~DFGla~  185 (304)
T cd05101         152 YLAS-------QKCIHRDLAARNVLVTENNVMKIADFGLAR  185 (304)
T ss_pred             HHHH-------CCCCCCCCCHHHEEECCCCCEEEEEEECCE
T ss_conf             9974-------886578777788557589958985401120