HHsearch alignment for GI: 254780795 and conserved domain: cd05103
>cd05103 PTKc_VEGFR2 Catalytic Domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=94.23 E-value=0.45 Score=26.56 Aligned_cols=30 Identities=30% Similarity=0.487 Sum_probs=25.2
Q ss_pred CCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 744402234642256279604873162135
Q gi|254780795|r 184 TGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 184 ~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 198 ~~ivHRDLK~~NiLl~~~~~vKi~DFGlar 227 (343)
T cd05103 198 RKCIHRDLAARNILLSENNVVKICDFGLAR 227 (343)
T ss_pred CCCCCCCCCCCEEEECCCCCEEECCCCCCC
T ss_conf 886667478500757789978981372340