HHsearch alignment for GI: 254780795 and conserved domain: cd05113

>cd05113 PTKc_Btk_Bmx Catalytic Domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=97.53  E-value=0.0018  Score=42.13  Aligned_cols=139  Identities=15%  Similarity=0.148  Sum_probs=76.4

Q ss_pred             EEEECCCCCEEEEEEEEECCC-CEEEEEECCC-CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
Q ss_conf             310046681200179994399-5899982166-99889999999999985326775551001026778752245155786
Q gi|254780795|r   26 SVQPIIHGVENSNFVIQTSKG-TFILTIYEKR-MNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFS  103 (316)
Q Consensus        26 ~~~~i~~G~~Ntny~v~t~~~-~yiLri~e~~-~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~  103 (316)
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~H-----pnIV~l~-g--~~~~~~~~~lv~E   79 (256)
T cd05113           8 FLKELGTGQFGVVKYGKWQGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH-----EKLVQLY-G--VCTKQRPIYIVTE   79 (256)
T ss_pred             EEEEEECCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCC-----CCCCCEE-E--EEEECCEEEEEEE
T ss_conf             806970287819999998799799999983588998999999999986799-----8976099-9--9988998999998


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             47887076899899999999864367530687543323112456457667520015522788999999988876521077
Q gi|254780795|r  104 FIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLP  183 (316)
Q Consensus       104 ~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp  183 (316)
T Consensus        80 y~~~G~L~~-----------~---l~~~~~~----------~~~~-~~~---------~~~~~ia~gl~yLH~-------  118 (256)
T cd05113          80 YLANGCLLN-----------Y---LREGLKR----------PTPS-QLL---------EMCKDVCEGMAYLES-------  118 (256)
T ss_pred             CCCCCCHHH-----------H---HHHCCCC----------CCHH-HHH---------HHHHHHHHHHHHHHH-------
T ss_conf             079998899-----------9---9854899----------9999-999---------999999999998705-------


Q ss_pred             CCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             744402234642256279604873162135
Q gi|254780795|r  184 TGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       184 ~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       119 ~~iiHrDlK~~NiLid~~~~~Kl~DFGls~  148 (256)
T cd05113         119 KQFIHRDLAARNCLVDSNGTVKVSDFGLSR  148 (256)
T ss_pred             CCCCCCCCCCCEEEECCCCCEEEEECCCCE
T ss_conf             894316577276988899979996168851