HHsearch alignment for GI: 254780795 and conserved domain: cd05573
>cd05573 STKc_ROCK_NDR_like STKc_ROCK_NDR_like: Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence.
Probab=97.39 E-value=0.0057 Score=38.83 Aligned_cols=137 Identities=17% Similarity=0.216 Sum_probs=70.5
Q ss_pred EEECCCCCEEEEEEEEEC-CCC-EEEEEECCC--CCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 100466812001799943-995-899982166--99889---99999999998532677555100102677875224515
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTS-KGT-FILTIYEKR--MNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~--~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316)
T Consensus 6 ~~~lG~G~fg~V~~a~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~~-----~hp~iv~l~~---~f~~~~~~y 77 (354)
T cd05573 6 IKVIGRGAFGEVWLVRKKDTGKVYAMKILRKSDMLKRNQVAHVRAERDILADA-----DSPWIVKLYY---SFQDEEYLY 77 (354)
T ss_pred EEEEECCCCEEEEEEEECCCCCEEEEEEECHHHHCCHHHHHHHHHHHHHHHHC-----CCCCCCEEEE---EEEECCEEE
T ss_conf 56863286839999998899989999998278813879999999999999867-----9999893999---999899999
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 78 lvmEy~~ggdL~-----------~~l~~~----~~l~--------e~~~~------------~~~~qi~~al~~lH---- 118 (354)
T cd05573 78 LVMEYMPGGDLM-----------TLLIKY----DVFP--------EETAR------------FYIAELVLAIDSVH---- 118 (354)
T ss_pred EEEECCCCCCHH-----------HHHHHC----CCCC--------HHHHH------------HHHHHHHHHHHHHH----
T ss_conf 999688998888-----------999866----9999--------99999------------99999999999999----
Q ss_pred HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 1077744402234642256279604873162135
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 119 ---~~~iiHRDlKPeNILl~~~g~vKL~DFGlak 149 (354)
T cd05573 119 ---KLGFIHRDIKPDNILIDADGHIKLADFGLCK 149 (354)
T ss_pred ---HCCEEECCCCCCEEEECCCCCEEEEECCCCE
T ss_conf ---7891751352565898899988980254630