HHsearch alignment for GI: 254780795 and conserved domain: cd05589
>cd05589 STKc_PKN STKc_PKN: Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, ce
Probab=97.47 E-value=0.0036 Score=40.15 Aligned_cols=140 Identities=14% Similarity=0.147 Sum_probs=74.4
Q ss_pred EEECCCCCEEEEEEEEEC-CC-CEEEEEECCC--CCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 100466812001799943-99-5899982166--9988---999999999998532677555100102677875224515
Q gi|254780795|r 27 VQPIIHGVENSNFVIQTS-KG-TFILTIYEKR--MNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~--~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316)
T Consensus 4 l~~lG~G~fG~V~la~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~~~~~--~HP~Iv~l~~---~f~~~~~~y 78 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSE--RHPFLVNLFA---CFQTEDHVC 78 (324)
T ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHC--CCCCCCEEEE---EEEECCEEE
T ss_conf 99982273819999999999989999998578842747999999999999998647--9999894999---999899999
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 79 lvmEy~~gGdL~--------------~~i~~--~~l~--------e~~~~------------~~~~qi~~aL~ylH~--- 119 (324)
T cd05589 79 FVMEYAAGGDLM--------------MHIHT--DVFS--------EPRAV------------FYAACVVLGLQYLHE--- 119 (324)
T ss_pred EEEECCCCCCHH--------------HHHHC--CCCC--------HHHHH------------HHHHHHHHHHHHHHH---
T ss_conf 999779998699--------------99743--8999--------99999------------999999999999997---
Q ss_pred HCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 10777444022346422562796048731621356
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316)
T Consensus 120 ----~~IiHRDlKPeNILl~~~g~iKL~DFGlak~ 150 (324)
T cd05589 120 ----NKIVYRDLKLDNLLLDTEGYVKIADFGLCKE 150 (324)
T ss_pred ----CCEEEEECCCCCCCCCCCCCEEEEECCHHHH
T ss_conf ----8988985365442136899889965111121