HHsearch alignment for GI: 254780795 and conserved domain: cd05592
>cd05592 STKc_nPKC_theta_delta STKc_nPKC_theta_delta: Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-del
Probab=97.28 E-value=0.0033 Score=40.38 Aligned_cols=134 Identities=18% Similarity=0.183 Sum_probs=66.7
Q ss_pred CCCCEEEEEEEEEC-CC-CEEEEEECCCC--CHHHHH---HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
Q ss_conf 66812001799943-99-58999821669--988999---9999999985326775551001026778752245155786
Q gi|254780795|r 31 IHGVENSNFVIQTS-KG-TFILTIYEKRM--NEKDLP---VFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFS 103 (316)
Q Consensus 31 ~~G~~Ntny~v~t~-~~-~yiLri~e~~~--~~~~l~---~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~ 103 (316)
T Consensus 4 G~G~fG~V~la~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~e~~il~~----~~~hp~Iv~l~~---~f~~~~~~ylvmE 76 (316)
T cd05592 4 GKGSFGKVMLAELKGTNEYYAIKALKKDVVLEDDDVECTMVERRVLIL----AWEHPFLTHLFC---TFQTKEHLFFVME 76 (316)
T ss_pred EECCCEEEEEEEECCCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHH----HCCCCCEEEEEE---EEEECCEEEEEEE
T ss_conf 638893999999999998999999827882371479999999999998----479997866999---9998999999996
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 47887076899899999999864367530687543323112456457667520015522788999999988876521077
Q gi|254780795|r 104 FIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLP 183 (316)
Q Consensus 104 ~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp 183 (316)
T Consensus 77 y~~gGdL~--------------~~l~~~-~~l~--------e~~a~------------~~~~qi~~aL~yLH~------- 114 (316)
T cd05592 77 YLNGGDLM--------------FHIQSS-GRFD--------EARAR------------FYAAEIICGLQFLHK------- 114 (316)
T ss_pred CCCCCCHH--------------HHHHHC-CCCC--------HHHHH------------HHHHHHHHHHHHHHH-------
T ss_conf 78998889--------------998655-9999--------99999------------999999999999997-------
Q ss_pred CCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 744402234642256279604873162135
Q gi|254780795|r 184 TGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 184 ~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 115 ~~IiHRDlKPeNILld~~g~vKL~DFGlak 144 (316)
T cd05592 115 KGIIYRDLKLDNVLLDRDGHIKIADFGMCK 144 (316)
T ss_pred CCCEEEECCCCCCCCCCCCCEEEEECCCCC
T ss_conf 890531147766573789988982056330