HHsearch alignment for GI: 254780795 and conserved domain: cd05596
>cd05596 STKc_ROCK STKc_ROCK: Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesio
Probab=96.86 E-value=0.0089 Score=37.59 Aligned_cols=140 Identities=13% Similarity=0.120 Sum_probs=72.6
Q ss_pred CCEEEEEECCCCCEEEEEEEEEC-CC-CEEEEEECCCC--CHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 86053100466812001799943-99-58999821669--988---9999999999985326775551001026778752
Q gi|254780795|r 22 GQLNSVQPIIHGVENSNFVIQTS-KG-TFILTIYEKRM--NEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFL 94 (316)
Q Consensus 22 g~~~~~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~--~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~ 94 (316)
T Consensus 43 dDFe~lk~lG~G~FG~V~lv~~k~tg~~yA~K~i~K~~~~~~~~~~~~~~E~~il~~~~h-----p~IV~l~~---~Fqd 114 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS-----EWIVQLHY---AFQD 114 (370)
T ss_pred HHCEEEEEEEECCCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEE
T ss_conf 885682268507284999999989998999999878996526789999999999986799-----98784899---9986
Q ss_pred CCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 24515578647887076899899999999864367530687543323112456457667520015522788999999988
Q gi|254780795|r 95 CKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFL 174 (316)
Q Consensus 95 ~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 174 (316)
T Consensus 115 ~~~lylVmEy~~GGdL~-----------~ll---~~--~~l~--------E~~a~------------~y~aqi~~aL~yL 158 (370)
T cd05596 115 DKYLYMVMEYMPGGDLV-----------NLM---SN--YDIP--------EKWAR------------FYTAEVVLALDAI 158 (370)
T ss_pred CCEEEEEEECCCCCCHH-----------HHH---HC--CCCC--------HHHHH------------HHHHHHHHHHHHH
T ss_conf 99999999489997489-----------998---73--7989--------99999------------9999999999998
Q ss_pred HHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 87652107774440223464225627960487316213
Q gi|254780795|r 175 KESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFS 212 (316)
Q Consensus 175 ~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~ 212 (316)
T Consensus 159 H-------~~~iiHRDLKPeNiLld~~G~iKL~DFGla 189 (370)
T cd05596 159 H-------SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (370)
T ss_pred H-------CCCEEECCCCCCCCCCCCCCCEEECCHHHH
T ss_conf 0-------086782257776531147886640352561